BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004024
(778 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/782 (73%), Positives = 670/782 (85%), Gaps = 22/782 (2%)
Query: 1 MRGNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKP----A 56
MRG+NR RQLHS L LQ+ N PS +RN+PK A
Sbjct: 3 MRGSNRFRQLHSRSCLRS-------LQTTTTANRKPS-----------TRNQPKTTSSLA 44
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D DI +WN+AIT HMRNG CDSAL +FNSMPRRSS+S+NAMISG L N + ARQ+F+
Sbjct: 45 TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFE 104
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+MP RDLVSWNVMISG VR ++L AAR LF+ MP+RDVVSWN MLSGYAQNGY A+ I
Sbjct: 105 KMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEI 164
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
FD M KN ISWNG+LAAYVQNGRIE+A LFESKA+WE++SWN +MGG+VK+ RL DA+
Sbjct: 165 FDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDAR 224
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
IFDRMP RDEVSWNTMI+GYAQN L EAQRLFEE+PV+DVFTWTAMVSGYVQNG +DE
Sbjct: 225 GIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDE 284
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
AR +FD MPEKN+VSWNA+IAGYVQ KRMD ARELFEAM C+NV+SWNTMITGYAQ+G+I
Sbjct: 285 ARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDI 344
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
ARN FDRMPQ D ISWAAIIAGYAQSGY E++L LF+EMKR GERLNRS FTS LSTC
Sbjct: 345 AQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTC 404
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A +A+LELGKQ+HG++VK G E+GC+VGNALLVMYCKCG++++AY FE I +K+V+SWN
Sbjct: 405 AEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWN 464
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
TMIAGYARHGFGK+ALMLFESMK GI PDD+TMVG+LSACSHTGLV+KGTEYFYSM +D
Sbjct: 465 TMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQD 524
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
YG+ NSKHYTCM+DLLGRAGRLD+AQNLMKNMPFEPDAATWGALLGA R++G TEL EK
Sbjct: 525 YGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 584
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
AA++IFEMEP+N+GMYVLLSNLYAASGRWGDV ++RL+MRDRGVKKV GYSW+EVQNK+H
Sbjct: 585 AAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIH 644
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
TF+VGD++HPE+DRIY +LEEL+ K+K++G+V STKLVLHDV EEEK HML+YHSEKLAV
Sbjct: 645 TFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAV 704
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+GIL+IPAGRPIRV+KNLRVCEDCHNA+KHISKIVGRLIILRD++RFHHF+GG CSCGD
Sbjct: 705 AFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGD 764
Query: 777 YW 778
YW
Sbjct: 765 YW 766
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 1178 bits (3048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/754 (71%), Positives = 651/754 (86%), Gaps = 1/754 (0%)
Query: 25 RLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF 84
R++ N + + +R + + NKP+ D DI +WN AI+THMRNG CDSALHVF
Sbjct: 14 RVRRVCTINFGHTSTSTRRSESVTNNNKPR-VKDPDILKWNKAISTHMRNGHCDSALHVF 72
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
N+MPRRSSVSYNAMISGYL N + + AR +FDQMP+RDL SWNVM++GYVRN L AR
Sbjct: 73 NTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARR 132
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
LF++MP++DVVSWN++LSGYAQNGY D AR +FD M EKN ISWNGLLAAYV NGRIEEA
Sbjct: 133 LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEA 192
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C+LFESK++W+++SWN LMGGFV++K+LGDA+W+FD+MPVRD +SWNTMI+GYAQ L+
Sbjct: 193 CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLS 252
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
+A+RLF+E+P +DVFTWTAMVSGYVQNG +DEA+ FD MPEKN VS+NAMIAGYVQTK+
Sbjct: 253 QARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKK 312
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
MD+ARELFE+M C+N++SWNTMITGY Q G+I AR FD MPQ DC+SWAAIIAGYAQS
Sbjct: 313 MDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQS 372
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G+ E++L +F+E+K+ GE LNR+ F LSTCA++A+LELGKQ+HGQ VK+G+ GCFVG
Sbjct: 373 GHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVG 432
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NALL MY KCGS++EA FE I +KDV+SWNTM+AGYARHGFG+ AL +FESMKT G+K
Sbjct: 433 NALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVK 492
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD+ITMVG+LSACSHTGL+++GTEYFYSM +DYGVIP SKHYTCM+DLLGRAGRL+EAQ+
Sbjct: 493 PDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQD 552
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
L++NMPF+P AA+WGALLGA R++G TEL EKAAE++F+MEP+N+GMYVLLSNLYAASGR
Sbjct: 553 LIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGR 612
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W D K+R KMRD GV+KV GYSW+EVQNK+HTFSVGD HPEK+RIYAYLEEL+ K+++
Sbjct: 613 WVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMRE 672
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G+V TKLVLHDV EEEKEHML+YHSEKLAVA+GIL+IP GRPIRVMKNLRVCEDCH+A
Sbjct: 673 EGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSA 732
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IKHISKIVGRLIILRD++RFHHF+ G CSCGDYW
Sbjct: 733 IKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 263/815 (32%), Positives = 390/815 (47%), Gaps = 164/815 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN I+ + + G A +F+ P R ++ AM+SGY+ NG LD A+ FD+MP
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+++ VS+N MI+GYV+ K + AR LFE MP R++ SWNTM++GY Q G AR+ FD
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVS-------------------- 218
M +++ +SW ++A Y Q+G EEA +F E K + E ++
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 219 ------------------WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
N+L+ + K + +A F+ + +D VSWNTM+ GYA++
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 261 NYLAEAQRLFEE---APVK-DVFT------------------------------------ 280
+ +A +FE A VK D T
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG---YVQTKRMDMARELFEAMT 336
+T M+ + G+++EA+ + MP + SW A++ + T+ + A E+ M
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRM--------PQHDCISWAAIIAGYAQSGYSE 388
+N + + YA SG A + +M P + + I ++ S
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSH 653
Query: 389 -DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL---HGQLVKVGFEAGCFVG 444
+ R++ ++ ++ + S+ + E + + H + + V F G
Sbjct: 654 PEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPG 713
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
+ + E+ + A + I K V + + H F E + G
Sbjct: 714 GRPIRVMKNLRVCEDCHSAIKHI-SKIVGRLIILRDSHRFHHFN-------EGFCSCG-- 763
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
D + L +TGL++ G EYFY MN +Y V P SKHYTCM+DLLGR RL+E
Sbjct: 764 --DYWLQFFLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE--- 818
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
GALLGA R++G TEL EKAA++ F+M P+N+G+
Sbjct: 819 --------------GALLGASRIHGNTELGEKAAQMFFKMGPQNSGIS------------ 852
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
KMRD GV+KV GYSW EVQNK+HTFSVG L E++ I +LEEL+ K+++
Sbjct: 853 ---------KMRDVGVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMRE 902
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN-LRVCEDCHN 743
EEEKE L+Y SE LA A GIL+IP GRP RVMK + VCEDC +
Sbjct: 903 R--------------EEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRS 948
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIKH+SKIVGRLI LRD++RF+ CSCG+YW
Sbjct: 949 AIKHMSKIVGRLITLRDSHRFNE---SICSCGEYW 980
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 277/513 (53%), Gaps = 26/513 (5%)
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
++++ + R + + N + +S S N + D++ WN +S + +NG+ D+
Sbjct: 8 RIYNNLRVRRVCTINFGHTSTSTRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDS 67
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
A +F+ M ++ +S+N +++ Y++N + A LF+ ++ SWN ++ G+V+ RL
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRL 127
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
GDA+ +FD MP +D VSWN++++GYAQN Y+ EA+ +F+ P K+ +W +++ YV NG
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNG 187
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+++EA ++F++ + + +SWN ++ G+V+ K++ AR LF+ M ++ SWNTMI+GYAQ
Sbjct: 188 RIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQ 247
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G ++ AR LFD P D +W A+++GY Q+G +++ F EM N + ++
Sbjct: 248 GGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAM 303
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
++ +++ ++L + + N ++ Y + G + +A F+ + +D
Sbjct: 304 IAGYVQTKKMDIARELFESMPCRNISS----WNTMITGYGQIGDIAQARKFFDMMPQRDC 359
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFY 531
+SW +IAGYA+ G ++AL +F +K G + T LS C+ +E G + +
Sbjct: 360 VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQ 419
Query: 532 SMNRDYGV---IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
++ YG + N+ ++ + + G +DEA + + + E D +W +L Y
Sbjct: 420 AVKMGYGTGCFVGNA-----LLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAG---Y 470
Query: 589 GKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+ +A V M +P+ M +LS
Sbjct: 471 ARHGFGRQALTVFESMKTAGVKPDEITMVGVLS 503
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/754 (71%), Positives = 651/754 (86%), Gaps = 1/754 (0%)
Query: 25 RLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF 84
R++ N + + +R + + NKP+ D DI +WN AI+THMRNG CDSALHVF
Sbjct: 14 RVRRVCTINFGHTSTSTRRSESVTNNNKPR-VKDPDILKWNKAISTHMRNGHCDSALHVF 72
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
N+MPRRSSVSYNAMISGYL N + + AR +FDQMP+RDL SWNVM++GYVRN L AR
Sbjct: 73 NTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARR 132
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
LF++MP++DVVSWN++LSGYAQNGY D AR +FD M EKN ISWNGLLAAYV NGRIEEA
Sbjct: 133 LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEA 192
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C+LFESK++W+++SWN LMGGFV++K+LGDA+W+FD+MPVRD +SWNTMI+GYAQ L+
Sbjct: 193 CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLS 252
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
+A+RLF+E+P +DVFTWTAMVSGYVQNG +DEA+ FD MPEKN VS+NAMIAGYVQTK+
Sbjct: 253 QARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKK 312
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
MD+ARELFE+M C+N++SWNTMITGY Q G+I AR FD MPQ DC+SWAAIIAGYAQS
Sbjct: 313 MDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQS 372
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G+ E++L +F+E+K+ GE LNR+ F LSTCA++A+LELGKQ+HGQ VK+G+ GCFVG
Sbjct: 373 GHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVG 432
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NALL MY KCGS++EA FE I +KDV+SWNTM+AGYARHGFG+ AL +FESMKT G+K
Sbjct: 433 NALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVK 492
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD+ITMVG+LSACSHTGL+++GTEYFYSM +DYGVIP SKHYTCM+DLLGRAGRL+EAQ+
Sbjct: 493 PDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQD 552
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
L++NMPF+P AA+WGALLGA R++G TEL EKAAE++F+MEP+N+GMYVLLSNLYAASGR
Sbjct: 553 LIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGR 612
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W D K+R KMRD GV+KV GYSW+EVQNK+HTFSVGD HPEK+RIYAYLEEL+ K+++
Sbjct: 613 WVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMRE 672
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G+V TKLVLHDV EEEKEHML+YHSEKLAVA+GIL+IP GRPIRVMKNLRVCEDCH+A
Sbjct: 673 EGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSA 732
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IKHISKIVGRLIILRD++RFHHF+ G CSCGDYW
Sbjct: 733 IKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 277/513 (53%), Gaps = 26/513 (5%)
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
++++ + R + + N + +S S N + D++ WN +S + +NG+ D+
Sbjct: 8 RIYNNLRVRRVCTINFGHTSTSTRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDS 67
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
A +F+ M ++ +S+N +++ Y++N + A LF+ ++ SWN ++ G+V+ RL
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRL 127
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
GDA+ +FD MP +D VSWN++++GYAQN Y+ EA+ +F+ P K+ +W +++ YV NG
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNG 187
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+++EA ++F++ + + +SWN ++ G+V+ K++ AR LF+ M ++ SWNTMI+GYAQ
Sbjct: 188 RIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQ 247
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G ++ AR LFD P D +W A+++GY Q+G +++ F EM N + ++
Sbjct: 248 GGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAM 303
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
++ +++ ++L + + N ++ Y + G + +A F+ + +D
Sbjct: 304 IAGYVQTKKMDIARELFESMPCRNISS----WNTMITGYGQIGDIAQARKFFDMMPQRDC 359
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFY 531
+SW +IAGYA+ G ++AL +F +K G + T LS C+ +E G + +
Sbjct: 360 VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQ 419
Query: 532 SMNRDYGV---IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
++ YG + N+ ++ + + G +DEA + + + E D +W +L Y
Sbjct: 420 AVKMGYGTGCFVGNA-----LLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAG---Y 470
Query: 589 GKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+ +A V M +P+ M +LS
Sbjct: 471 ARHGFGRQALTVFESMKTAGVKPDEITMVGVLS 503
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/747 (71%), Positives = 639/747 (85%), Gaps = 3/747 (0%)
Query: 32 TNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS 91
TN Y K +R NS S + K D DI WN AI++HMRNG CDSAL VFNSMPRRS
Sbjct: 20 TNNYYRSK--RRSTNSYSPSSVK-FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRS 76
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
SVSYNAMISGYL N + AR +FD+MP+RDL SWNVM++GYVRN+ L A LF++MPK
Sbjct: 77 SVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPK 136
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
+DVVSWN MLSGYAQNG+ D AR +F++M +N ISWNGLLAAYV NGR++EA LFES+
Sbjct: 137 KDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQ 196
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+NWE++SWN LMGG+VK+ LGDA+ +FDRMPVRD +SWNTMI+GYAQ L++A+RLF
Sbjct: 197 SNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN 256
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
E+P++DVFTWTAMVSGYVQNG VDEAR FD MP KN +S+NAM+AGYVQ K+M +A EL
Sbjct: 257 ESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGEL 316
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
FEAM C+N++SWNTMITGY Q+G I AR LFD MPQ DC+SWAAII+GYAQ+G+ E++L
Sbjct: 317 FEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEAL 376
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+F+EMKR GE NRS F+ LSTCA++A+LELGKQ+HGQ+VK GFE GCFVGNALL MY
Sbjct: 377 NMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMY 436
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCGS +EA FE I +KDV+SWNTMIAGYARHGFG+ AL+LFESMK G+KPD+ITMV
Sbjct: 437 FKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMV 496
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+LSACSH+GL+++GTEYFYSM+RDY V P SKHYTCM+DLLGRAGRL+EA+NLM+NMPF
Sbjct: 497 GVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPF 556
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
+P AA+WGALLGA R++G TEL EKAAE++F+MEP+N+GMYVLLSNLYAASGRW DV K+
Sbjct: 557 DPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKM 616
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R KMR+ GV+KVTGYSW+EVQNK+HTFSVGD HPEKDRIYA+LEEL+ K++++G+V ST
Sbjct: 617 RSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSST 676
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
KLVLHDV EEEKEHML+YHSEKLAVA+GIL+IPAGRPIRVMKNLRVC+DCHNAIKHISKI
Sbjct: 677 KLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKI 736
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
VGRLIILRD++RFHHFS G CSCGDYW
Sbjct: 737 VGRLIILRDSHRFHHFSEGICSCGDYW 763
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 1127 bits (2915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/774 (67%), Positives = 645/774 (83%), Gaps = 5/774 (0%)
Query: 6 RLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPK-PAGDWDIRQW 64
R +QLH + L+ + N AN + S K + KS+ KP GD DI++W
Sbjct: 12 RAQQLHYTS-LNGLKRRCNNAHGAAN---FHSLKRATQTQIQKSQTKPLLKCGDSDIKEW 67
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
NVAI+++MR G C+ AL VF MPR SSVSYN MISGYL NG+ + AR++FD+MP+RDLV
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
SWNVMI GYVRN++L AR LFE+MP+RDV SWNTMLSGYAQNG D AR +FDRM EKN
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN 187
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
++SWN LL+AYVQN ++EEACMLF+S+ NW +VSWN L+GGFVK+K++ +A+ FD M V
Sbjct: 188 DVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV 247
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
RD VSWNT+ITGYAQ+ + EA++LF+E+PV+DVFTWTAMVSGY+QN V+EAR +FD M
Sbjct: 248 RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
PE+N VSWNAM+AGYVQ +RM+MA+ELF+ M C+NV++WNTMITGYAQ G+I+ A+NLFD
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+MP+ D +SWAA+IAGY+QSG+S ++LRLF++M+R G RLNRS F+S LSTCA++ +LEL
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GKQLHG+LVK G+E GCFVGNALL+MYCKCGS+EEA F+E+ KD++SWNTMIAGY+R
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HGFG+ AL FESMK G+KPDD TMV +LSACSHTGLV+KG +YFY+M +DYGV+PNS+
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 547
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CMVDLLGRAG L++A NLMKNMPFEPDAA WG LLGA R++G TELAE AA+ IF M
Sbjct: 548 HYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
EPEN+GMYVLLSNLYA+SGRWGDV K+R++MRD+GVKKV GYSW+E+QNK HTFSVGD
Sbjct: 608 EPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEF 667
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
HPEKD I+A+LEEL+ ++K+ G+V T +VLHDV EEEKE M+RYHSE+LAVAYGI+ +
Sbjct: 668 HPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVS 727
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+GRPIRV+KNLRVCEDCHNAIK++++I GRLIILRDNNRFHHF GSCSCGDYW
Sbjct: 728 SGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/776 (66%), Positives = 646/776 (83%), Gaps = 7/776 (0%)
Query: 9 QLHSSCILHQHTQSINRLQSPAN-----TNPYPSKKTLKRHLNSKSRNKPKP-AGDWDIR 62
Q++ L + S+N L+ N +N + SK + + + KS+ KP P +GD DI+
Sbjct: 2 QIYKFGALSRRHTSLNGLKRRYNNANSASNFHSSKSSTQTQIQ-KSQTKPLPKSGDSDIK 60
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
+WNVAI+++MR G C AL VF MPR SSVSYNAMISGYL NG+ + AR +FD+MP+RD
Sbjct: 61 EWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERD 120
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
LVSWNVMI GYVRN++L AR LFE MP+RDV SWNT+LSGYAQNG D ARR+FDRM E
Sbjct: 121 LVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPE 180
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
KN++SWN LL+AYVQN ++EEAC+LF S+ NW +VSWN L+GGFVK+K++ +A+ FD M
Sbjct: 181 KNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 240
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
VRD VSWNT+ITGYAQN + EA++LF+E+PV DVFTWTAMVSGY+QN V+EAR +FD
Sbjct: 241 KVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFD 300
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
MPE+N VSWNAM+AGYVQ +R++MA+ELF+ M C+NV++WNTMITGYAQ G+I+ A+NL
Sbjct: 301 RMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 360
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD+MP+ D +SWAA+IAGY+QSG+S ++LRLF+ M+R G RLNRS F+S LSTCA++ +L
Sbjct: 361 FDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVAL 420
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
ELGKQLHG+LVK G+E GCFVGNALL+MYCKCGS+EEA F+E+ KD++SWNTMIAGY
Sbjct: 421 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 480
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+RHGFG++AL FESMK G+KPDD TMV +LSACSHTGLV+KG +YF++M +DYGV PN
Sbjct: 481 SRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPN 540
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
S+HY CMVDLLGRAG L+EA NLMKNMPFEPDAA WG LLGA R++G TELAE AA+ IF
Sbjct: 541 SQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 600
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
MEPEN+GMYVLLSNLYA+SGRWGDV K+R++MRD+GVKKV GYSW+E+QNK HTFSVGD
Sbjct: 601 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 660
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HPEKD I+A+LE+L+ ++K+ G+V T +VLHDV EEEKE M+RYHSE+LAVAYGI+
Sbjct: 661 EFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR 720
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ +GRPIRV+KNLRVCEDCHNAIK+++K+ GRLIILRDNNRFHHF GSCSCGDYW
Sbjct: 721 VSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 1126 bits (2913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/778 (68%), Positives = 641/778 (82%), Gaps = 6/778 (0%)
Query: 2 RGNNRLRQLHSSCILHQHTQSI-NRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
RGN R S T+SI N+L++ + ++P T K +S+N D D
Sbjct: 4 RGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKL----ESKNSDSTIVDSD 59
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
I +WN I+ +MR G C+SAL VFN M RRS+V+YNAMISGYL N + D AR+VF++MP
Sbjct: 60 IVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPD 119
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
RDL+SWNVM+SGYV+N +LSAAR LF MP++DVVSWN MLSG+AQNG+ + AR+IFD+M
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L KNEISWNGLL+AYVQNGRIE+A LF+SK +WE+VSWN LMGG+V++KRL DA+ +FD
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFD 239
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
RMPVRD++SWN MITGYAQN L+EA+RLFEE P++DVF WTAMVSG+VQNG +DEA I
Sbjct: 240 RMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRI 299
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
F+ MPEKN VSWNAMIAGYVQ+++++ ARELF+ M +N +SWNTM+TGYAQ G I A+
Sbjct: 300 FEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAK 359
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LFD MPQ DCISWAA+I+GYAQSG SE++L LFI+MKR G LNRS LS+CA +A
Sbjct: 360 ILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIA 419
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+LELGKQLHG+LVK GF+ G GNALL MY KCGS+EEA+ FE+I +KD++SWNTMIA
Sbjct: 420 ALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIA 479
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYARHGFGK+AL LFESMK IKPDD+T+VG+LSACSHTGLV+KG EYF SM ++YG+
Sbjct: 480 GYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGIT 538
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
N+KHYTCM+DLLGRAGRLDEA NLMK+MPF PDAATWGALLGA R++G TEL EKAAE
Sbjct: 539 ANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEK 598
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+FEMEP+N+GMYVLLSNLYAASGRW +V ++R KMRD+GVKKV GYSW+E+QNK H F+V
Sbjct: 599 VFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTV 658
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HPE +RIYAYLEEL+ +LK+DGFV STKLVLHDV EEEKEHML+YHSEKLAVA+GI
Sbjct: 659 GDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI 718
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LSIP GRPIRV+KNLRVCEDCHNAIKHISKI R II+RD+NRFHHFS GSCSCGDYW
Sbjct: 719 LSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 1125 bits (2909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/778 (68%), Positives = 640/778 (82%), Gaps = 6/778 (0%)
Query: 2 RGNNRLRQLHSSCILHQHTQSI-NRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
RGN R S T+SI N+L++ + ++P T K +S+N D D
Sbjct: 4 RGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKL----ESKNSDSTIVDSD 59
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
I +WN I+ +MR G C+SAL VFN M RRS+V+YNAMISGYL N + D AR+VF++MP
Sbjct: 60 IVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPD 119
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
RDL+SWNVM+SGYV+N +LSAAR LF MP++DVVSWN MLSG+AQNG+ + AR+IFD+M
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L KNEISWNGLL+AYVQNGRIE+A LF+SK +WE+VSWN LMGG+V++KRL DA+ +FD
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFD 239
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
RMPVRD++SWN MITGYAQN L+EA+RLFEE P++DVF WTAMVSG+VQNG +DEA I
Sbjct: 240 RMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRI 299
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
F+ MPEKN VSWNAMIAGYVQ+++++ ARELF+ M +N +SWNTM+TGYAQ G I A+
Sbjct: 300 FEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAK 359
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LFD MPQ DCISWAA+I+GYAQSG SE++L LFI+MKR G LNRS LS+CA +A
Sbjct: 360 ILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIA 419
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+LELGKQLHG+LVK GF+ G GNALL MY KCGS+EEA+ FE+I +KD++SWNTMIA
Sbjct: 420 ALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIA 479
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYARHGFGK+AL LFESMK IKPDD+T+VG+LSACSHTG V+KG EYF SM ++YG+
Sbjct: 480 GYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGIT 538
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
N+KHYTCM+DLLGRAGRLDEA NLMK+MPF PDAATWGALLGA R++G TEL EKAAE
Sbjct: 539 ANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEK 598
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+FEMEP+N+GMYVLLSNLYAASGRW +V ++R KMRD+GVKKV GYSW+E+QNK H F+V
Sbjct: 599 VFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTV 658
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HPE +RIYAYLEEL+ +LK+DGFV STKLVLHDV EEEKEHML+YHSEKLAVA+GI
Sbjct: 659 GDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI 718
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LSIP GRPIRV+KNLRVCEDCHNAIKHISKI R II+RD+NRFHHFS GSCSCGDYW
Sbjct: 719 LSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/664 (76%), Positives = 589/664 (88%), Gaps = 7/664 (1%)
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
FD + + DL G VR ++L AAR LF+ MP+RDVVSWN MLSGYAQNGY A+
Sbjct: 29 FDFLERHDL-------RGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAK 81
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
IFD M KN ISWNG+LAAYVQNGRIE+A LFESKA+WE++SWN +MGG+VK+ RL D
Sbjct: 82 EIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVD 141
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
A+ IFDRMP RDEVSWNTMI+GYAQN L EAQRLFEE+PV+DVFTWTAMVSGYVQNG +
Sbjct: 142 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGML 201
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
DEAR +FD MPEKN+VSWNA+IAGYVQ KRMD ARELFEAM C+NV+SWNTMITGYAQ+G
Sbjct: 202 DEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNG 261
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+I ARN FDRMPQ D ISWAAIIAGYAQSGY E++L LF+EMKR GERLNRS FTS LS
Sbjct: 262 DIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLS 321
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
TCA +A+LELGKQ+HG++VK G E+GC+VGNALLVMYCKCG++++AY FE I +K+V+S
Sbjct: 322 TCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVS 381
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WNTMIAGYARHGFGK+ALMLFESMK GI PDD+TMVG+LSACSHTGLV+KGTEYFYSM
Sbjct: 382 WNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMT 441
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+DYG+ NSKHYTCM+DLLGRAGRLD+AQNLMKNMPFEPDAATWGALLGA R++G TEL
Sbjct: 442 QDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELG 501
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
EKAA++IFEMEP+N+GMYVLLSNLYAASGRWGDV ++RL+MRDRGVKKV GYSW+EVQNK
Sbjct: 502 EKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNK 561
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
+HTF+VGD++HPE+DRIY +LEEL+ K+K++G+V STKLVLHDV EEEK HML+YHSEKL
Sbjct: 562 IHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKL 621
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
AVA+GIL+IPAGRPIRV+KNLRVCEDCHNA+KHISKIVGRLIILRD++RFHHF+GG CSC
Sbjct: 622 AVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSC 681
Query: 775 GDYW 778
GDYW
Sbjct: 682 GDYW 685
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 260/482 (53%), Gaps = 51/482 (10%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+A +F+ MP R VS+NAM+SGY NG + A+++FD+MP ++ +SWN M++ YV+N
Sbjct: 48 AARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGR 107
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ AR LFE +++SWN M+ GY + AR IFDRM E++E+SWN +++ Y QN
Sbjct: 108 IEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQN 167
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
G + EA LFE +V +W +++ G+V+ L +A+ +FD MP ++ VSWN +I GY
Sbjct: 168 GELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYV 227
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
Q + +A+ LFE P ++V +W M++GY QNG + +AR FD MP+++++SW A+IAG
Sbjct: 228 QCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAG 287
Query: 319 YVQTKRMDMARELFEAM-----------------TCKNVASW------------------ 343
Y Q+ + A LF M TC +A+
Sbjct: 288 YAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESG 347
Query: 344 ----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N ++ Y + G I A +F+ + + + +SW +IAGYA+ G+ +++L LF MK+
Sbjct: 348 CYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKK 407
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVE 458
G + VLS C++ ++ G + + + G A ++ + + G ++
Sbjct: 408 TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 467
Query: 459 EAYHAFEEI-VDKDVISWNTMIAGYARHG---FG-KDALMLFESMKTVGIKPDDITMVGI 513
+A + + + + D +W ++ HG G K A M+FE ++PD+ M +
Sbjct: 468 DAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE------MEPDNSGMYVL 521
Query: 514 LS 515
LS
Sbjct: 522 LS 523
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/778 (64%), Positives = 622/778 (79%), Gaps = 28/778 (3%)
Query: 1 MRGNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
MRG LRQLHSS H Q P +P+ K T
Sbjct: 1 MRGKFNLRQLHSSIF---HVQRPTNYPKPHFEDPHTVKCT-------------------- 37
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
AI+THMRNG CD AL VF++MP R+SVSYNAMISGYL N + AR +FD+MP
Sbjct: 38 -----KAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPH 92
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+DL SWN+M++GY RN+ L AR LF+ MP++DVVSWN MLSGY ++G+ D AR +FDRM
Sbjct: 93 KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM 152
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
KN ISWNGLLAAYV++GR+EEA LFESK++WE++S N LMGG+VK+ LGDA+ +FD
Sbjct: 153 PHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFD 212
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
++PVRD +SWNTMI+GYAQ+ L++A+RLFEE+PV+DVFTWTAMV YVQ+G +DEAR +
Sbjct: 213 QIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRV 272
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
FD MP+K +S+N MIAGY Q KRMDM RELFE M N+ SWN MI+GY Q+G++ AR
Sbjct: 273 FDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQAR 332
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
NLFD MPQ D +SWAAIIAGYAQ+G E+++ + +EMKR GE LNRS F LS CA++A
Sbjct: 333 NLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIA 392
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+LELGKQ+HGQ+V+ G+E GC VGNAL+ MYCKCG ++EAY F+ + KD++SWNTM+A
Sbjct: 393 ALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLA 452
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYARHGFG+ AL +FESM T G+KPD+ITMVG+LSACSHTGL ++GTEYF+SMN+DYG+
Sbjct: 453 GYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGIT 512
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
PNSKHY CM+DLLGRAG L+EAQNL++NMPFEPDAATWGALLGA R++G EL E+AAE+
Sbjct: 513 PNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEM 572
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+F+MEP N+GMYVLLSNLYAASGRW DVSK+RLKMR GV+K GYSW+EVQNK+HTF+V
Sbjct: 573 VFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTV 632
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HPEK RIYA+LEEL+ K+K +G+V STKLVLHDV EEEK+HML+YHSEKLAVA+GI
Sbjct: 633 GDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGI 692
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
L++P+G+PIRVMKNLRVCEDCHNAIKHISKIVGRLII+RD++R+HHFS G CSC DYW
Sbjct: 693 LTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/751 (60%), Positives = 584/751 (77%), Gaps = 15/751 (1%)
Query: 43 RHLNSKSRNK----PKPAGDW-----------DIRQWNVAITTHMRNGCCDSALHVFNSM 87
RHL S +R + P AGD ++ + N AIT HMR G A +F +M
Sbjct: 5 RHLRSAARQRSHRPPPAAGDASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERLFAAM 64
Query: 88 PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
PRRS+ +YNAM++GY NG+L A +F +P+ D S+N ++ + SL+ AR LF+
Sbjct: 65 PRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFD 124
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
MP RD V++N M+S +A +G AR FD EK+ +SWNG+LAAYV+NGR+EEA L
Sbjct: 125 EMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGL 184
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F S+ W+V+SWN+LM G+V+ ++ +A+ +FDRMP RD VSWN M++GYA+ + EA+
Sbjct: 185 FNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEAR 244
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
RLF+ APV+DVFTWTA+VSGY QNG ++EAR +FDAMPE+N VSWNAM+A Y+Q + MD
Sbjct: 245 RLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE 304
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A+ELF M C+NVASWNTM+TGYAQ+G + A+ +FD MPQ D +SWAA++A Y+Q G S
Sbjct: 305 AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCS 364
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
E++L+LFIEM R GE +NRS F VLSTCA++A+LE G QLHG+L++ G+ GCFVGNAL
Sbjct: 365 EETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
L MY KCG++E+A +AFEE+ ++DV+SWNTMIAGYARHGFGK+AL +F+ M+T KPDD
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 484
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
IT+VG+L+ACSH+GLVEKG YFYSM+ D+GV +HYTCM+DLLGRAGRL EA +LMK
Sbjct: 485 ITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK 544
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
+MPFEPD+ WGALLGA R++ EL AAE IFE+EPENAGMYVLLSN+YA+SG+W D
Sbjct: 545 DMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRD 604
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
K+R+ M +RGVKKV G+SW+EVQNKVHTFS GD +HPEK++IYA+LE+L+ ++K+ G+
Sbjct: 605 ARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGY 664
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V +T +VLHDV EEEKEHML+YHSEKLAVAYGIL+IP GRPIRV+KNLRVC DCHNA K+
Sbjct: 665 VSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKY 724
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS I GRLI+LRD+NRFHHF GGSCSCGDYW
Sbjct: 725 ISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 238/492 (48%), Gaps = 53/492 (10%)
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
M+P R + S S DA+ LE I N + A+++ GR+ +A L
Sbjct: 1 MLPSRHLRSAARQRSHRPPPAAGDASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERL 60
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F + ++N+++ G+ RL A +F +P D S+NT++ A ++ LA+A+
Sbjct: 61 FAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADAR 120
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA---------- 317
LF+E PV+D T+ M+S + +G V AR FD PEK+ VSWN M+A
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE 180
Query: 318 ---------------------GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
GYVQ +M ARELF+ M ++V SWN M++GYA+ G++
Sbjct: 181 ARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDM 240
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD P D +W A+++GYAQ+G E++ R+F M ER N + ++++
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP---ER-NAVSWNAMVAAY 296
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
++ K+L + + N +L Y + G +EEA F+ + KD +SW
Sbjct: 297 IQRRMMDEAKELFNMMPCRNVAS----WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR- 535
M+A Y++ G ++ L LF M G + +LS C+ +E G + + R
Sbjct: 353 AMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRA 412
Query: 536 DYGV---IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
YGV + N+ ++ + + G +++A+N + M E D +W ++ Y +
Sbjct: 413 GYGVGCFVGNA-----LLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAG---YARHG 463
Query: 593 LAEKAAEVIFEM 604
++A E IF+M
Sbjct: 464 FGKEALE-IFDM 474
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/751 (60%), Positives = 583/751 (77%), Gaps = 15/751 (1%)
Query: 43 RHLNSKSRNK----PKPAGDW-----------DIRQWNVAITTHMRNGCCDSALHVFNSM 87
RHL S +R + P AGD ++ + N AIT HMR G A +F +M
Sbjct: 5 RHLRSAARQRSHRPPPAAGDASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERLFAAM 64
Query: 88 PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
PRRS+ +YNAM++GY NG+L A +F +P+ D S+N ++ + SL+ AR LF+
Sbjct: 65 PRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFD 124
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
MP RD V++N M+S +A +G AR FD EK+ +SWNG+LAAYV+NGR+EEA L
Sbjct: 125 EMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGL 184
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F S+ W+ +SWN+LM G+V+ ++ +A+ +FDRMP RD VSWN M++GYA+ + EA+
Sbjct: 185 FNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEAR 244
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
RLF+ APV+DVFTWTA+VSGY QNG ++EAR +FDAMPE+N VSWNAM+A Y+Q + MD
Sbjct: 245 RLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE 304
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A+ELF M C+NVASWNTM+TGYAQ+G + A+ +FD MPQ D +SWAA++A Y+Q G S
Sbjct: 305 AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCS 364
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
E++L+LFIEM R GE +NRS F VLSTCA++A+LE G QLHG+L++ G+ GCFVGNAL
Sbjct: 365 EETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
L MY KCG++E+A +AFEE+ ++DV+SWNTMIAGYARHGFGK+AL +F+ M+T KPDD
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 484
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
IT+VG+L+ACSH+GLVEKG YFYSM+ D+GV +HYTCM+DLLGRAGRL EA +LMK
Sbjct: 485 ITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK 544
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
+MPFEPD+ WGALLGA R++ EL AAE IFE+EPENAGMYVLLSN+YA+SG+W D
Sbjct: 545 DMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRD 604
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
K+R+ M +RGVKKV G+SW+EVQNKVHTFS GD +HPEK++IYA+LE+L+ ++K+ G+
Sbjct: 605 ARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGY 664
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V +T +VLHDV EEEKEHML+YHSEKLAVAYGIL+IP GRPIRV+KNLRVC DCHNA K+
Sbjct: 665 VSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKY 724
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS I GRLI+LRD+NRFHHF GGSCSCGDYW
Sbjct: 725 ISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 238/492 (48%), Gaps = 53/492 (10%)
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
M+P R + S S DA+ LE I N + A+++ GR+ +A L
Sbjct: 1 MLPSRHLRSAARQRSHRPPPAAGDASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERL 60
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F + ++N+++ G+ RL A +F +P D S+NT++ A ++ LA+A+
Sbjct: 61 FAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADAR 120
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA---------- 317
LF+E PV+D T+ M+S + +G V AR FD PEK+ VSWN M+A
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE 180
Query: 318 ---------------------GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
GYVQ +M ARELF+ M ++V SWN M++GYA+ G++
Sbjct: 181 ARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDM 240
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD P D +W A+++GYAQ+G E++ R+F M ER N + ++++
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP---ER-NAVSWNAMVAAY 296
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
++ K+L + + N +L Y + G +EEA F+ + KD +SW
Sbjct: 297 IQRRMMDEAKELFNMMPCRNVAS----WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR- 535
M+A Y++ G ++ L LF M G + +LS C+ +E G + + R
Sbjct: 353 AMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRA 412
Query: 536 DYGV---IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
YGV + N+ ++ + + G +++A+N + M E D +W ++ Y +
Sbjct: 413 GYGVGCFVGNA-----LLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAG---YARHG 463
Query: 593 LAEKAAEVIFEM 604
++A E IF+M
Sbjct: 464 FGKEALE-IFDM 474
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/748 (60%), Positives = 584/748 (78%), Gaps = 12/748 (1%)
Query: 43 RHLNSKSRNK-----PKPAG-------DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR 90
RHL + +R + P PA D ++ + N AIT HMR G A +F +MPRR
Sbjct: 77 RHLRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRR 136
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
S+ +YN M++GY NG+L A F +P+ D S+N ++ + SL+ R LF+ MP
Sbjct: 137 STSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMP 196
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
+D VS+N M+S +A +G AR FD EK+ +SWNG+LAAYV+NGRI+EA LF+S
Sbjct: 197 VKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDS 256
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+ W+ +SWN+LM G+V++ ++ +A+ +F++MP RD VSWNTM++GYA+ +AEA+RLF
Sbjct: 257 RTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF 316
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ AP++DVFTWTA+VSGY QNG ++EA+ +FDAMP+KN VSWNAM+A YVQ + M+ A+E
Sbjct: 317 DVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKE 376
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
LF+AM C+NVASWNTM+TGYAQ+G + AR +F MPQ D +SWAA++A Y+Q G+SE++
Sbjct: 377 LFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEET 436
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L+LF EM R GE +NRS F VLSTCA++A+LE G QLH +L+K G+ GCFVGNALL M
Sbjct: 437 LQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAM 496
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCGS+EEA+ AFEE+ ++DV+SWNTMIAGYARHGFGK+AL +F++M+ KPDDIT+
Sbjct: 497 YFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITL 556
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
VG+L+ACSH+GLVEKG YFYSM+RD+GV +HYTCM+DLLGRAGRLDEA NLMK+MP
Sbjct: 557 VGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMP 616
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
FEPD+ WGALLGA R++ +EL AAE IFE+EPENAGMYVLLSN+YA+SG+W DV K
Sbjct: 617 FEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDK 676
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
+R M +RGVKKV G+SW+EVQNKVHTFSVGD++HPE++ IYA+LE+L+ ++K+ G+V +
Sbjct: 677 MRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSA 736
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
T +VLHDV EEEKEHML+YHSEKLAVAYGIL IP GRPIRV+KNLRVC DCH A K IS
Sbjct: 737 TDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISA 796
Query: 751 IVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I GRLIILRD+NRFHHF GSCSCGDYW
Sbjct: 797 IEGRLIILRDSNRFHHFRDGSCSCGDYW 824
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/719 (59%), Positives = 555/719 (77%), Gaps = 15/719 (2%)
Query: 43 RHLNSKSRNK----PKPAGDW-----------DIRQWNVAITTHMRNGCCDSALHVFNSM 87
RHL S +R + P AGD ++ + N AIT HMR G A +F +M
Sbjct: 5 RHLRSAARQRSHRPPPAAGDASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERLFAAM 64
Query: 88 PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
PRRS+ +YNAM++GY NG+L A +F +P+ D S+N ++ + SL+ AR LF+
Sbjct: 65 PRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFD 124
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
MP RD V++N M+S +A +G AR FD EK+ +SWNG+LAAYV+NGR+EEA L
Sbjct: 125 EMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGL 184
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F S+ W+V+SWN+LM G+V+ ++ +A+ +FDRMP RD VSWN M++GYA+ + EA+
Sbjct: 185 FNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEAR 244
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
RLF+ APV+DVFTWTA+VSGY QNG ++EAR +FDAMPE+N VSWNAM+A Y+Q + MD
Sbjct: 245 RLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE 304
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A+ELF M C+NVASWNTM+TGYAQ+G + A+ +FD MPQ D +SWAA++A Y+Q G S
Sbjct: 305 AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCS 364
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
E++L+LFIEM R GE +NRS F VLSTCA++A+LE G QLHG+L++ G+ GCFVGNAL
Sbjct: 365 EETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
L MY KCG++E+A +AFEE+ ++DV+SWNTMIAGYARHGFGK+AL +F+ M+T KPDD
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 484
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
IT+VG+L+ACSH+GLVEKG YFYSM+ D+GV +HYTCM+DLLGRAGRL EA +LMK
Sbjct: 485 ITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK 544
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
+MPFEPD+ WGALLGA R++ EL AAE IFE+EPENAGMYVLLSN+YA+SG+W D
Sbjct: 545 DMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRD 604
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
K+R+ M +RGVKKV G+SW+EVQNKVHTFS GD +HPEK++IYA+LE+L+ ++K+ G+
Sbjct: 605 ARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGY 664
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
V +T +VLHDV EEEKEHML+YHSEKLAVAYGIL+IP GRPIRV+KNLRVC DCHNA K
Sbjct: 665 VSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFK 723
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 238/492 (48%), Gaps = 53/492 (10%)
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
M+P R + S S DA+ LE I N + A+++ GR+ +A L
Sbjct: 1 MLPSRHLRSAARQRSHRPPPAAGDASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERL 60
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F + ++N+++ G+ RL A +F +P D S+NT++ A ++ LA+A+
Sbjct: 61 FAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADAR 120
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA---------- 317
LF+E PV+D T+ M+S + +G V AR FD PEK+ VSWN M+A
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE 180
Query: 318 ---------------------GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
GYVQ +M ARELF+ M ++V SWN M++GYA+ G++
Sbjct: 181 ARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDM 240
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD P D +W A+++GYAQ+G E++ R+F M ER N + ++++
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP---ER-NAVSWNAMVAAY 296
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
++ K+L + + N +L Y + G +EEA F+ + KD +SW
Sbjct: 297 IQRRMMDEAKELFNMMPCRNVAS----WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR- 535
M+A Y++ G ++ L LF M G + +LS C+ +E G + + R
Sbjct: 353 AMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRA 412
Query: 536 DYGV---IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
YGV + N+ ++ + + G +++A+N + M E D +W ++ Y +
Sbjct: 413 GYGVGCFVGNA-----LLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAG---YARHG 463
Query: 593 LAEKAAEVIFEM 604
++A E IF+M
Sbjct: 464 FGKEALE-IFDM 474
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/630 (64%), Positives = 518/630 (82%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
MP RD V++N M+S +A +G AR FD EK+ +SWNG+LAAYV+NGR+EEA LF
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
S+ W+V+SWN+LM G+V+ ++ +A+ +FDRMP RD VSWN M++GYA+ + EA+R
Sbjct: 61 NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARR 120
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
LF+ APV+DVFTWTA+VSGY QNG ++EAR +FDAMPE+N VSWNAM+A Y+Q + MD A
Sbjct: 121 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA 180
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+ELF M C+NVASWNTM+TGYAQ+G + A+ +FD MPQ D +SWAA++A Y+Q G SE
Sbjct: 181 KELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSE 240
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++L+LFIEM R GE +NRS F VLSTCA++A+LE G QLHG+L++ G+ GCFVGNALL
Sbjct: 241 ETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALL 300
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG++E+A +AFEE+ ++DV+SWNTMIAGYARHGFGK+AL +F+ M+T KPDDI
Sbjct: 301 AMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 360
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T+VG+L+ACSH+GLVEKG YFYSM+ D+GV +HYTCM+DLLGRAGRL EA +LMK+
Sbjct: 361 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 420
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MPFEPD+ WGALLGA R++ EL AAE IFE+EPENAGMYVLLSN+YA+SG+W D
Sbjct: 421 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDA 480
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
K+R+ M +RGVKKV G+SW+EVQNKVHTFS GD +HPEK++IYA+LE+L+ ++K+ G+V
Sbjct: 481 RKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 540
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
+T +VLHDV EEEKEHML+YHSEKLAVAYGIL+IP GRPIRV+KNLRVC DCHNA K+I
Sbjct: 541 SATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYI 600
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S I GRLI+LRD+NRFHHF GGSCSCGDYW
Sbjct: 601 SAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 241/473 (50%), Gaps = 49/473 (10%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
MP R SV+YN MIS + +G + AR FD P++D VSWN M++ YVRN + AR LF
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM 206
+ DV+SWN ++SGY Q G AR +FDRM ++ +SWN +++ Y + G + EA
Sbjct: 61 NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARR 120
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
LF++ +V +W +++ G+ + L +A+ +FD MP R+ VSWN M+ Y Q + EA
Sbjct: 121 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA 180
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+ LF P ++V +W M++GY Q G ++EA+ +FD MP+K+ VSW AM+A Y Q +
Sbjct: 181 KELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSE 240
Query: 327 MARELFEAM-----------------TCKNVASW----------------------NTMI 347
+LF M TC ++A+ N ++
Sbjct: 241 ETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALL 300
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
Y + G + ARN F+ M + D +SW +IAGYA+ G+ +++L +F M+ + +
Sbjct: 301 AMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 360
Query: 408 PFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
VL+ C++ +E G + G A ++ + + G + EA+ ++
Sbjct: 361 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 420
Query: 467 I-VDKDVISWNTMIAGYARH---GFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ + D W ++ H G+ A + K ++P++ M +LS
Sbjct: 421 MPFEPDSTMWGALLGASRIHRNPELGRSA-----AEKIFELEPENAGMYVLLS 468
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 221/433 (51%), Gaps = 47/433 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D +NV I++H +G A H F+ P + +VS+N M++ Y+ NG+++ AR +F+
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 64
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ D++SWN ++SGYV+ +S AR LF+ MP RDVVSWN M+SGYA+ G ARR+FD
Sbjct: 65 EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA 124
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
++ +W +++ Y QNG +EEA +F++ VSWN+++ +++++ + +AK +F
Sbjct: 125 APVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELF 184
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+ MP R+ SWNTM+TGYAQ L EA+ +F+ P KD +W AM++ Y Q G +E
Sbjct: 185 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 244
Query: 300 IFDAMPE---------------------------------------KNTVSWNAMIAGYV 320
+F M NA++A Y
Sbjct: 245 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 304
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAA 376
+ M+ AR FE M ++V SWNTMI GYA+ G A +FD M + D I+
Sbjct: 305 KCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVG 364
Query: 377 IIAGYAQSGYSEDSLRLFIEMKR-YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++A + SG E + F M +G +T ++ L + H + +
Sbjct: 365 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRL---AEAHDLMKDM 421
Query: 436 GFEAGCFVGNALL 448
FE + ALL
Sbjct: 422 PFEPDSTMWGALL 434
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 193/369 (52%), Gaps = 44/369 (11%)
Query: 45 LNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL 104
L S +R+ A + D WN + ++RNG + A +FNS +S+NA++SGY+
Sbjct: 21 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQ 80
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
G++ AR++FD+MP RD+VSWN+M+SGY R + AR LF+ P RDV +W ++SGY
Sbjct: 81 WGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGY 140
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
AQNG + ARR+FD M E+N +SWN ++AAY+Q ++EA LF V SWN+++
Sbjct: 141 AQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLT 200
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------------ 272
G+ + L +AK +FD MP +D VSW M+ Y+Q E +LF E
Sbjct: 201 GYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSA 260
Query: 273 -----APVKDV----------------------FTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ D+ F A+++ Y + G +++AR F+ M
Sbjct: 261 FACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME 320
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY----AQSGEITHARN 361
E++ VSWN MIAGY + A E+F+ M + + + G + SG + +
Sbjct: 321 ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 380
Query: 362 LFDRMPQHD 370
F M HD
Sbjct: 381 YFYSM-HHD 388
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 199/398 (50%), Gaps = 25/398 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ W ++ + +NG + A VF++MP R++VS+NAM++ Y+ +D A+++F+ MP
Sbjct: 129 DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 188
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
R++ SWN M++GY + L A+ +F+ MP++D VSW ML+ Y+Q G ++ ++F
Sbjct: 189 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 248
Query: 180 MLE----KNEISWNGLLAAYVQNGRIEEACMLFES--KANWEVVSW--NSLMGGFVKQKR 231
M N ++ +L+ +E L +A + V + N+L+ + K
Sbjct: 249 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 308
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSG 287
+ DA+ F+ M RD VSWNTMI GYA++ + EA +F+ + D T +++
Sbjct: 309 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 368
Query: 288 YVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVA 341
+G V++ F +M V+ + MI + R+ A +L + M + +
Sbjct: 369 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 428
Query: 342 SWNTMI--TGYAQSGEI--THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
W ++ + ++ E+ + A +F+ P++ + + + YA SG D+ ++ + M
Sbjct: 429 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGM-YVLLSNIYASSGKWRDARKMRVMM 487
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+ G + + P S + + + G +H + K+
Sbjct: 488 EERG--VKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKI 523
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/705 (54%), Positives = 510/705 (72%), Gaps = 60/705 (8%)
Query: 43 RHLNSKSRNKP--KPAG----------DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR 90
RHL + +R + +PA D ++ + N AIT HMR G A +F +M RR
Sbjct: 5 RHLRAAARQRSHRRPAAPADACITGKPDAEVIRRNKAITAHMRAGRVPDAERLFAAMSRR 64
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
S+ +YNAM+ GY NG+L A F +P+ D S+N ++ + SL+ AR LF+ MP
Sbjct: 65 STSTYNAMLGGYAANGRLTLALSFFRSIPRPDSFSYNTLLHALGVSSSLADARALFDEMP 124
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
+D VS+N M+S +A +G AR FD EK+ +SWNG+LAAY++NGRI+EA LF+S
Sbjct: 125 VKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDS 184
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+ W+ +SWN+LM G+V+ ++ +A+ +F+RMP RD VSWNTM++G+A+ +AEA+RLF
Sbjct: 185 RTEWDAISWNALMAGYVQCSQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLF 244
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ AP++DVFTWTA+VSGY QNG ++EA+ +FDAMPEKN VSWNAM+A YVQ + M+ A+E
Sbjct: 245 DVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKE 304
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
LF+AM C+NVASWNTM+TGYAQ+G + AR +FD MPQ D +SWAA++A Y+Q G+SE++
Sbjct: 305 LFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDAVSWAAMLAAYSQGGFSEET 364
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L+LF EM R CA M
Sbjct: 365 LQLFKEMGR----------------CA--------------------------------M 376
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG++EEA+ AFEE+ ++D++SWNTMIAGYARHGFGK+AL +F++M+ KPDDIT+
Sbjct: 377 YFKCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITL 436
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
VG+L+ACSH+GLVEKG YFYSM+RD+GV +HYTCM+DLLGRAGRLDEA NLMK+MP
Sbjct: 437 VGVLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMP 496
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
FEPD+ WGALLGA R++ +EL AAE IFE+EPENAGMYVLLSN+YA+SG+W DV K
Sbjct: 497 FEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDK 556
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
+RL M +RGVKKV G+SW+EVQNKVHTFSVGD++HPE++ IY +LE+L+ ++K+ G+V +
Sbjct: 557 MRLMMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYGFLEDLDIRMKKAGYVSA 616
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
T +VLHDV EEEKEHML+YHSEKLAVAYGIL IP GRPIR NL
Sbjct: 617 TDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRQCCNL 661
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/557 (65%), Positives = 453/557 (81%), Gaps = 5/557 (0%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
++ G+++ + A+ +FD+MP RD SWN M+TGY +N L A+ LFE P +D+ +W
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
AM+SGY QNG VDEAR IF MP KN +SWN ++A YVQ R++ A+ LFE+ +
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLV 120
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
SWN ++ G+ + RNLFD MPQ D ISW+A+IAGY+Q+G SE++L F+EM+R
Sbjct: 121 SWNCLMGGF-----VRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDC 175
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
ERLNRS FT LSTC+N+A+LELG+QLH +LVK G++ G +VGNALL MYCKCGS++EA
Sbjct: 176 ERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEAR 235
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
AF+EI++KDV+SWNTMI GYARHGFG++AL +FE MKT GI+PDD TMV +L+ACSH G
Sbjct: 236 DAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAG 295
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV++G+EYFYSMNRDYG+ HYTCMVDLLGRAG+L+EAQNLMKNMPFEPDAATWGAL
Sbjct: 296 LVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGAL 355
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGA R++G TEL EKAA++IFEMEP N+GMY+LLS LYAASGRW D K+RL+MR++GVK
Sbjct: 356 LGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVK 415
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
KV GYSWLEVQNK+HTF VGDT HP D+IY +LEE++ KLKQ+G++ ST LV HDV EE
Sbjct: 416 KVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEE 475
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EK HML+YHSEKLAVAYGIL IPAGRPIRV+KNLRVCEDCHNAIK+ISKIVGRLIILRDN
Sbjct: 476 EKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDN 535
Query: 762 NRFHHFSGGSCSCGDYW 778
+RFH+F GGSCSC D+W
Sbjct: 536 HRFHYFEGGSCSCRDFW 552
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/432 (38%), Positives = 237/432 (54%), Gaps = 56/432 (12%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
MISGYL N + D AR +FD+MP+RDL SWNVM++GYVRN+ L AR LFE MP+RD+VSW
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
N MLSGYAQNG+ D AR IF +M KN ISWNGLLAAYVQNGRIE+A LFESK +W +V
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLV 120
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK- 276
SWN LMGGFV+++R +FD MP RD +SW+ MI GY+QN EA F E
Sbjct: 121 SWNCLMGGFVRKRRN-----LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDC 175
Query: 277 ---DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN-TVSW---NAMIAGYVQTKRMDMAR 329
+ ++T +S ++ R + + + W NA++A Y + +D AR
Sbjct: 176 ERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEAR 235
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+ F+ + K+V SWNTMI GY A+ G+ E+
Sbjct: 236 DAFQEILEKDVVSWNTMIHGY-------------------------------ARHGFGEE 264
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALL 448
+L +F MK G R + + SVL+ C++ ++ G + + + G A ++
Sbjct: 265 ALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMV 324
Query: 449 VMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG---FG-KDALMLFESMKTVGI 503
+ + G +EEA + + + + D +W ++ HG G K A ++FE +
Sbjct: 325 DLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFE------M 378
Query: 504 KPDDITMVGILS 515
+P + M +LS
Sbjct: 379 EPHNSGMYILLS 390
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 190/381 (49%), Gaps = 30/381 (7%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
L+ H +R+ + D+ WNV +T ++RN +A +F MP R VS+NAM+S
Sbjct: 6 LRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLS 65
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
GY NG +D AR++F +MP ++ +SWN +++ YV+N + A+ LFE +VSWN +
Sbjct: 66 GYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCL 125
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSW 219
+ G+ + R +FD M +++ ISW+ ++A Y QNG EEA F E + + E ++
Sbjct: 126 MGGFVRK-----RRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNR 180
Query: 220 NSLMGGFVKQKRLGD---AKWIFDRM-PVRDEVSW---NTMITGYAQNNYLAEAQRLFEE 272
+S + + + R+ + W N ++ Y + + EA+ F+E
Sbjct: 181 SSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQE 240
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMD 326
KDV +W M+ GY ++G +EA +F+ M P+ T+ +++A +D
Sbjct: 241 ILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMV--SVLAACSHAGLVD 298
Query: 327 MARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
E F +M + + M+ ++G++ A+NL MP + D +W A++
Sbjct: 299 QGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGA 358
Query: 381 ---YAQSGYSEDSLRLFIEMK 398
+ + E + ++ EM+
Sbjct: 359 SRIHGNTELGEKAAQIIFEME 379
>gi|255587181|ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525755|gb|EEF28217.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 513
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/513 (70%), Positives = 426/513 (83%), Gaps = 4/513 (0%)
Query: 1 MRGNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
MR + RQLHSSC + TQ I + N PYPSKK L + +S+N+ + D D
Sbjct: 1 MRERCQWRQLHSSC---RRTQKIQQSVKGTNRTPYPSKKELTQKF-KQSKNESEKTTDSD 56
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
I WN+AITTHMRNG C SAL VFN+MPRRS+V+YNAMISGYL NG+ D AR++FD+MP+
Sbjct: 57 IVNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDKMPE 116
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
RDL +WNVM+SGYVRNK+L+ AR LFE MP+RDVVSWN MLSGYAQNG+ AR IFD M
Sbjct: 117 RDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIFDEM 176
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
KN ISWNGLLAAYVQNGRIE+A LFESK +W+VVSWN LMGGFVK+KRL DA+ +FD
Sbjct: 177 PVKNSISWNGLLAAYVQNGRIEDARRLFESKMDWDVVSWNCLMGGFVKKKRLVDARRVFD 236
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
R+PVRDEVSWNTMITGYAQN L EA++LFEE+P +DVFTWTAMVSGYVQNG VDEAR I
Sbjct: 237 RIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQDVFTWTAMVSGYVQNGMVDEARSI 296
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
FD MPEKN+VSWNAMIAGYVQ KRMDMA+ELFEAM +N++SWNTMITGYAQSG + HAR
Sbjct: 297 FDKMPEKNSVSWNAMIAGYVQCKRMDMAKELFEAMPFRNISSWNTMITGYAQSGNVPHAR 356
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
NLFDRMPQ D ISW+A+IAGY Q+G +E+++ L++EMKR GE LNRS FTSVL+ CA++A
Sbjct: 357 NLFDRMPQRDSISWSAMIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFTSVLTACADIA 416
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+L+LGKQ HG LVKVG++ GC+VGNALL MYCKCGS++EA AF EI DKD+ISWNTMI
Sbjct: 417 ALDLGKQFHGWLVKVGYQTGCYVGNALLAMYCKCGSIDEADDAFHEITDKDLISWNTMIY 476
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
GYARHGFGK+AL++FESMKTVG+KPD+ TMV +
Sbjct: 477 GYARHGFGKEALIVFESMKTVGVKPDEATMVTV 509
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 275/488 (56%), Gaps = 28/488 (5%)
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ ++N E D+V+WN ++ + +NG +A ++F+ M ++ +++N +++ Y+
Sbjct: 40 QKFKQSKNESEKTTDSDIVNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYL 99
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
NGR + A +F+ ++ +WN ++ G+V+ K L DA+ +F+RMP RD VSWN M++G
Sbjct: 100 SNGRFDLAREMFDKMPERDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSG 159
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YAQN ++AEA+ +F+E PVK+ +W +++ YVQNG++++AR +F++ + + VSWN ++
Sbjct: 160 YAQNGFIAEAREIFDEMPVKNSISWNGLLAAYVQNGRIEDARRLFESKMDWDVVSWNCLM 219
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
G+V+ KR+ AR +F+ + ++ SWNTMITGYAQ+GE+ AR LF+ P D +W A
Sbjct: 220 GGFVKKKRLVDARRVFDRIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQDVFTWTA 279
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+++GY Q+G +++ +F +M N + ++++ +++ K+L
Sbjct: 280 MVSGYVQNGMVDEARSIFDKMPEK----NSVSWNAMIAGYVQCKRMDMAKEL-------- 327
Query: 437 FEAGCFVG----NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
FEA F N ++ Y + G+V A + F+ + +D ISW+ MIAGY ++G ++A+
Sbjct: 328 FEAMPFRNISSWNTMITGYAQSGNVPHARNLFDRMPQRDSISWSAMIAGYVQNGCNEEAV 387
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
L+ MK G + + +L+AC+ ++ G + F+ G ++ +
Sbjct: 388 HLYVEMKRDGESLNRSSFTSVLTACADIAALDLGKQ-FHGWLVKVGYQTGCYVGNALLAM 446
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE------MEP 606
+ G +DEA + + + D +W ++ +G K A ++FE ++P
Sbjct: 447 YCKCGSIDEADDAFHEIT-DKDLISWNTMIYGYARHG----FGKEALIVFESMKTVGVKP 501
Query: 607 ENAGMYVL 614
+ A M +
Sbjct: 502 DEATMVTV 509
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/688 (49%), Positives = 474/688 (68%), Gaps = 1/688 (0%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
+++YN+ I+ Y GQ++ AR+VFD+MP + +VSWN M++GY +N AR LF+ MP+
Sbjct: 16 AIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPE 75
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
R+ VSWN ++SGY +N AR+ FD M E+N +SW ++ YVQ G + EA LF
Sbjct: 76 RNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM 135
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
VVSW ++GG ++ +R+ +A+ +FD MPV+D V+ MI+GY Q LAEA+ LF+
Sbjct: 136 PEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFD 195
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
E P ++V +WT M+SGYVQNG+VD AR +F+ MPEKN VSW AM+ GY Q R++ A EL
Sbjct: 196 EMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASEL 255
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F+AM K V + N MI G+ Q+GE+ AR +FD++ + D +W+A+I Y + G+ ++L
Sbjct: 256 FDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEAL 315
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF M+R G + N SVLS CA+LASL+ G+Q+H +LVK F++ FV + L+ MY
Sbjct: 316 NLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMY 375
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG + +A F+ KD++ WN++I GYA+HG ++AL +F M + G+ D +T V
Sbjct: 376 VKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFV 435
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+LSACS+TG V++G E F SM Y V P ++HY CMVDLLGRAG +++A +L++ MP
Sbjct: 436 GVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPV 495
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
E DA WGALLGACR + LAE AA+ + ++EP+NAG Y+LLSN+YA+ GRWGDV+++
Sbjct: 496 EADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAEL 555
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVG-DTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
R MR + V K G SW+EV+ +VH F+ G T HPE I LE+L+ L++ G+
Sbjct: 556 RRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPD 615
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
+ VLHDV EEEK L +HSE+LAVA+G+L +P G PIRVMKNLRVC DCH+AIK I+K
Sbjct: 616 SSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAK 675
Query: 751 IVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I GR IILRD NRFHHF G CSC DYW
Sbjct: 676 ITGREIILRDANRFHHFKDGFCSCRDYW 703
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 260/559 (46%), Gaps = 90/559 (16%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D I WN + + +N A ++F+ MP R++VS+N +ISGY+ N + AR+ FD
Sbjct: 44 DKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDT 103
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+R++VSW M+ GYV+ +S A LF MP+++VVSW ML G Q D AR +F
Sbjct: 104 MPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLF 163
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
D M K+ ++ +++ Y Q GR+ EA LF+ V+SW +++ G+V+ ++ A+
Sbjct: 164 DIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARK 223
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+F+ MP ++EVSW M+ GY Q + EA LF+ PVK V AM+ G+ QNG+V +A
Sbjct: 224 LFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKA 283
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNV 340
R +FD + EK+ +W+AMI Y + A LF M C ++
Sbjct: 284 RQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASL 343
Query: 341 ASWN----------------------TMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
AS + +IT Y + G++ AR +FDR D + W +II
Sbjct: 344 ASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSII 403
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
GYAQ G E++L++F EM G + F VLS C+
Sbjct: 404 TGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSY-------------------- 443
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT-----MIAGYARHGFGKDALM 493
G V+E FE + K ++ T M+ R G DA+
Sbjct: 444 ---------------TGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMD 488
Query: 494 LFESMKTVGIKPDDITMVGILSACS---HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
L + M ++ D I +L AC + L E + + N+ Y +
Sbjct: 489 LIQKMP---VEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPK-----NAGPYILLS 540
Query: 551 DLLGRAGRLDEAQNLMKNM 569
++ GR + L +NM
Sbjct: 541 NIYASKGRWGDVAELRRNM 559
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 204/405 (50%), Gaps = 48/405 (11%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
+K + S++R + ++ W + +++ G A +F MP ++ VS+ M+
Sbjct: 89 VKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLG 148
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G + ++D AR +FD MP +D+V+ MISGY + L+ AR LF+ MP+R+V+SW TM
Sbjct: 149 GLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTM 208
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
+SGY QNG D AR++F+ M EKNE+SW +L Y Q GRIEEA LF++ VV+ N
Sbjct: 209 ISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACN 268
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK- 276
+++ GF + + A+ +FD++ +D+ +W+ MI Y + + EA LF + V+
Sbjct: 269 AMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQS 328
Query: 277 -----------------------------------DVFTWTAMVSGYVQNGKVDEARMIF 301
DVF + +++ YV+ G + +AR IF
Sbjct: 329 NFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIF 388
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY----AQSGEIT 357
D K+ V WN++I GY Q ++ A ++F M +A+ G + +G++
Sbjct: 389 DRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVK 448
Query: 358 HARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEM 397
+F+ M + +A ++ ++G D++ L +M
Sbjct: 449 EGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKM 493
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/687 (50%), Positives = 464/687 (67%), Gaps = 1/687 (0%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
+S N++I+ Y GQ++ AR VFD+M ++++SWN +++GY +NK A+N+F+ M +R
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER 158
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
+ +SWN ++SGY NG + AR +FDRM E+N +SW ++ YV+ G I EA LF
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
VVSW ++GG +++ R+ +A +FD MP +D V+ MI GY Q L EA+ LF+E
Sbjct: 219 EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDE 278
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
P ++V +WT M++GYVQN +VD AR +F+ MPEKN VSW AM+ GY R+D A ELF
Sbjct: 279 MPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELF 338
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
AM K+V + N MI + Q+GE+ AR +FD+M + D +W+A+I Y + G D+L
Sbjct: 339 NAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALE 398
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF M+R G R N SVLS CA LA+L+ G+++H QLV+ F+ +V + LL MY
Sbjct: 399 LFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYI 458
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCG++ +A F+ KDV+ WN++I GYA+HG G +AL +F M GI PDD+T VG
Sbjct: 459 KCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVG 518
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+LSACS+TG V+KG E F SM Y V +HY CMVDLLGRAG+L+EA +L++ MP E
Sbjct: 519 VLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPME 578
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
DA WGALLGACR + K +LAE AA+ + +EP+NAG ++LLSN+YA+ GRW DV+++R
Sbjct: 579 ADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELR 638
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVYST 691
MRDR V K G SW+ V+ KVH F+ GD+ HPE I LE L L++ G+
Sbjct: 639 RNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQ 698
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
VLHDV EEEK L YHSEKLAVAYG+L IP G PIRVMKNLRVC DCH AIK I+K+
Sbjct: 699 SFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKV 758
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
GR IILRD NRFHHF GSCSC DYW
Sbjct: 759 TGREIILRDANRFHHFKDGSCSCRDYW 785
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/687 (50%), Positives = 464/687 (67%), Gaps = 1/687 (0%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
+S N++I+ Y GQ++ AR VFD+M ++++SWN +++GY +NK A+N+F+ M +R
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER 158
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
+ +SWN ++SGY NG + AR +FDRM E+N +SW ++ YV+ G I EA LF
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
VVSW ++GG +++ R+ +A +FD MP +D V+ MI GY Q L EA+ LF+E
Sbjct: 219 EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDE 278
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
P ++V +WT M++GYVQN +VD AR +F+ MPEKN VSW AM+ GY R+D A ELF
Sbjct: 279 MPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELF 338
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
AM K+V + N MI + Q+GE+ AR +FD+M + D +W+A+I Y + G D+L
Sbjct: 339 NAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALE 398
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF M+R G R N SVLS CA LA+L+ G+++H QLV+ F+ +V + LL MY
Sbjct: 399 LFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYI 458
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCG++ +A F+ KDV+ WN++I GYA+HG G +AL +F M GI PDD+T VG
Sbjct: 459 KCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVG 518
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+LSACS+TG V+KG E F SM Y V +HY CMVDLLGRAG+L+EA +L++ MP E
Sbjct: 519 VLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPME 578
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
DA WGALLGACR + K +LAE AA+ + +EP+NAG ++LLSN+YA+ GRW DV+++R
Sbjct: 579 ADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELR 638
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVYST 691
MRDR V K G SW+ V+ KVH F+ GD+ HPE I LE L L++ G+
Sbjct: 639 RNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQ 698
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
VLHDV EEEK L YHSEKLAVAYG+L IP G PIRVMKNLRVC DCH AIK I+K+
Sbjct: 699 SFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKV 758
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
GR IILRD NRFHHF GSCSC DYW
Sbjct: 759 TGREIILRDANRFHHFKDGSCSCRDYW 785
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/692 (49%), Positives = 463/692 (66%), Gaps = 3/692 (0%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQ--MPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
+ + S + I+ Y NGQLD AR+VFD+ +P R + SWN M++ Y + A LFE
Sbjct: 20 QCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFE 79
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
MP+R+ VSWN ++SG+ +NG ARR+FD M ++N +SW ++ YV+NG + EA L
Sbjct: 80 KMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERL 139
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F + VVSW ++GG +++ R+ DA+ +FD MP +D V+ MI GY + L EA+
Sbjct: 140 FWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEAR 199
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
LF+E P ++V TWTAMVSGY +NGKVD AR +F+ MPE+N VSW AM+ GY + RM
Sbjct: 200 ALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMRE 259
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A LF+AM K V N MI G+ +GE+ AR +F M + D +W+A+I Y + GY
Sbjct: 260 ASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYE 319
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
++L LF M+R G LN SVLS C +LASL+ GKQ+H QLV+ F+ +V + L
Sbjct: 320 LEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVL 379
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KCG++ A F KDV+ WN+MI GY++HG G++AL +F M + G+ PDD
Sbjct: 380 ITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDD 439
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T +G+LSACS++G V++G E F +M Y V P +HY C+VDLLGRA +++EA L++
Sbjct: 440 VTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVE 499
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP EPDA WGALLGACR + K +LAE A E + ++EP+NAG YVLLSN+YA GRW D
Sbjct: 500 KMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRD 559
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDG 686
V +R K++ R V K+ G SW+EV+ KVH F+ GD+ HPE+ I LE+L L++ G
Sbjct: 560 VEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAG 619
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ VLHDV EEEK H L YHSEKLAVAYG+L +P G PIRVMKNLRVC DCH+AIK
Sbjct: 620 YCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIK 679
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I+K+ GR IILRD NRFHHF G CSC DYW
Sbjct: 680 LIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 197/371 (53%), Gaps = 14/371 (3%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
+K + S++R D ++ W + ++RNG A +F MP ++ VS+ M+
Sbjct: 97 IKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLG 156
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G L G++D AR++FD MP++D+V+ MI GY L AR LF+ MPKR+VV+W M
Sbjct: 157 GLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAM 216
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
+SGYA+NG D AR++F+ M E+NE+SW +L Y +GR+ EA LF++ VV N
Sbjct: 217 VSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCN 276
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK 276
++ GF + A+ +F M RD +W+ MI Y + Y EA LF E
Sbjct: 277 EMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLAL 336
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELF 332
+ + +++S V +D + + + +++ + +I YV+ + A+++F
Sbjct: 337 NFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVF 396
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRM-----PQHDCISWAAIIAGYAQSGYS 387
K+V WN+MITGY+Q G A N+F M P D +++ +++ + SG
Sbjct: 397 NRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDD-VTFIGVLSACSYSGKV 455
Query: 388 EDSLRLFIEMK 398
++ L LF MK
Sbjct: 456 KEGLELFETMK 466
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/701 (47%), Positives = 471/701 (67%), Gaps = 6/701 (0%)
Query: 84 FNSMPRRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
F +P RS S +A I+ ++ GQ+D AR +FD + + + SWN +++GY NK
Sbjct: 3 FRLIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKR 62
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ A+ LF+ MP+R+ +SWN ++SGY +NG AR++FD+M E+N +SW ++ YVQ
Sbjct: 63 PAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQE 122
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
G I+EA +LF VVSW ++GG ++ R+ +A+ +FD +PV+D V+ MI G
Sbjct: 123 GLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLC 182
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
L+EA+ +F+E P ++V WT+M+SGY N KVD AR +F+ MP+KN V+W AM+ G
Sbjct: 183 SEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKG 242
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y ++ R++ A ELF+AM K VA+ N MI G+ +GE+ AR +FD+M + D +W+A+I
Sbjct: 243 YTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALI 302
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
Y + G+ ++L LF M+R G R N S+LS C +LASL+ G+Q+H QLV+ F+
Sbjct: 303 KIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFD 362
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+V + L+ MY KCG + F+ KD++ WN++IAGYA+HGFG+ AL +F M
Sbjct: 363 LDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEM 422
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
+ G PD+IT +G+LSAC +TG V++G E F SM Y V ++HY CMVDLLGRAG+
Sbjct: 423 FSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGK 482
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L+EA NL++NMP E DA WGALL ACR + +LAE AA+ + ++EP +AG Y+LLSNL
Sbjct: 483 LNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNL 542
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEE 677
YA+ RW DV+++R MR R V K G SW+EV NKVH F+ G + HPE + I LE+
Sbjct: 543 YASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEK 602
Query: 678 LEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRV 737
L L++ G+ V+HDV EE+K H LR+HSEK+AVAYG+L +P G+PIRVMKNLRV
Sbjct: 603 LGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRV 662
Query: 738 CEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
C DCH+AIK I+++ GR IILRD NRFHHF G CSC D+W
Sbjct: 663 CGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 235/466 (50%), Gaps = 41/466 (8%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ WN + + N A +F+ MP R+++S+N ++SGY+ NG + AR+VFD+MP+
Sbjct: 47 VTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPE 106
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
R++VSW M+ GYV+ + A LF MP+++VVSW ML G ++G D ARR+FD +
Sbjct: 107 RNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMI 166
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
K+ ++ ++ GR+ EA +F+ VV+W S++ G+ ++ A+ +F+
Sbjct: 167 PVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFE 226
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
MP ++EV+W M+ GY ++ + EA LF+ PVK V M+ G+ NG+V +AR +
Sbjct: 227 VMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWV 286
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW 343
FD M EK+ +W+A+I Y + A LF M C ++AS
Sbjct: 287 FDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASL 346
Query: 344 N----------------------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
+ +IT Y + G++ + +FDR D + W +IIAGY
Sbjct: 347 DHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGY 406
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAG 440
AQ G+ E +L +F EM G + F VLS C ++ G ++ + K +
Sbjct: 407 AQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQK 466
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
++ + + G + EA + E + V+ D I W +++ H
Sbjct: 467 TEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTH 512
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 195/370 (52%), Gaps = 12/370 (3%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
+K + S++R + ++ W + +++ G D A +F MP ++ VS+ M+
Sbjct: 89 VKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLG 148
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G + +G++D AR++FD +P +D+V+ MI G LS AR +F+ MP+R+VV+W +M
Sbjct: 149 GLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSM 208
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
+SGYA N D AR++F+ M +KNE++W +L Y ++GRI EA LF++ V + N
Sbjct: 209 ISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACN 268
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVK 276
++ GF +G A+W+FD+M +D+ +W+ +I Y + + EA LF E
Sbjct: 269 GMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRP 328
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELF 332
+ + +++S +D R + + + + +I Y++ + + +F
Sbjct: 329 NFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVF 388
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSE 388
+ + K++ WN++I GYAQ G A +F M D I++ +++ +G +
Sbjct: 389 DRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVK 448
Query: 389 DSLRLFIEMK 398
+ L +F MK
Sbjct: 449 EGLEIFESMK 458
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/692 (50%), Positives = 462/692 (66%), Gaps = 4/692 (0%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQ--MPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
RS S + IS Y G + AR+VFD +PQR + SWN M+S Y + A LF+
Sbjct: 17 RSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFD 76
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
MP+R+ VS+N M+SGY +NG AR++FD M E+N +SW ++ YVQ G +EEA L
Sbjct: 77 QMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKL 136
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F VVSW ++GG +K+ R+ DAK +FD +P +D V MI GY Q L EA+
Sbjct: 137 FWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEAR 196
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
LF+E V++VFTWT MVSGY +NG+VD AR +F+ MPE+N VSW AM+ GY Q+ RM
Sbjct: 197 ELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKE 256
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A ELFEAM K + + N MI + +GE+ AR +F+ M + D +W A+I + + G
Sbjct: 257 AFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLD 316
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
++L LF M+R G LN SVLS CA+LASL+ G+Q+H +LV+ F+ +V + L
Sbjct: 317 LEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVL 376
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KCG + A F + KDV+ WN+MI GY++HG G++AL +F M + G++PD+
Sbjct: 377 ITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDE 436
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T +G+LSACS++G V++G E F +M Y V P +HY CMVDLLGRAGR+DEA L++
Sbjct: 437 VTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVE 496
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP EPDA WGALLGACR + K +LAE A E + ++EP+NAG YVLLS++YA GRW D
Sbjct: 497 KMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRD 556
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDG 686
V +R K+ +R V K G SW+EV+ KVH F+ GD+ HPE+ I LE+L L++ G
Sbjct: 557 VEVLRKKI-NRRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAG 615
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ VLHDV EEEK H L YHSE+LAVAYG+L +P G PIRVMKNLRVC DCH+AIK
Sbjct: 616 YCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIK 675
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I+K+ GR IILRD NRFHHF GSCSC D+W
Sbjct: 676 LIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 247/482 (51%), Gaps = 55/482 (11%)
Query: 51 NKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP 110
N P P I WN ++ + + AL +F+ MP+R++VS+N MISGY+ NG +
Sbjct: 44 NTPLP--QRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVAD 101
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
AR+VFD MP+R++VSW M+ GYV+ + A LF MP+R+VVSW M+ G +
Sbjct: 102 ARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRI 161
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
D A+++FD + EK+ + ++ Y Q GR++EA LF+ V +W +++ G+ K
Sbjct: 162 DDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNG 221
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
R+ A+ +F+ MP R+EVSW M+ GY Q+ + EA LFE PVK + M+ +
Sbjct: 222 RVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGL 281
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM-ARELFEAM-------------- 335
G++ ARM+F+ M E++ +WNAMI + + K +D+ A LF M
Sbjct: 282 AGEMHRARMMFEGMKERDEGTWNAMIKVF-ERKGLDLEALGLFARMQREGVALNFPSMIS 340
Query: 336 ---TCKNVASWN----------------------TMITGYAQSGEITHARNLFDRMPQHD 370
C ++AS + +IT Y + G++ A+ +F+R D
Sbjct: 341 VLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKD 400
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+ W ++I GY+Q G E++L +F +M G + + F VLS C+ ++ G ++
Sbjct: 401 VVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFE 460
Query: 431 QL-----VKVGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYA 483
+ V+ G E C V + + G V+EA E++ ++ D I W ++
Sbjct: 461 AMKCTYQVEPGIEHYACMVD-----LLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACR 515
Query: 484 RH 485
H
Sbjct: 516 NH 517
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ +V IT +++ G A +FN + V +N+MI+GY +G + A VF
Sbjct: 367 DQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHD 426
Query: 118 M----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-----KRDVVSWNTMLSGYAQNG 168
M Q D V++ ++S + + +FE M + + + M+ + G
Sbjct: 427 MCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAG 486
Query: 169 YADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
D A + ++M +E + I W LL A + +++ A + E A E
Sbjct: 487 RVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLE 534
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/783 (45%), Positives = 470/783 (60%), Gaps = 120/783 (15%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
IS ++ NG A +VFD MP ++L SWN+M++GYV+N+ L ARNLF++MP++D VSWN
Sbjct: 55 ISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWN 114
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV- 217
MLSGY ++G D A+ +FD M K+ ISWNGLLA YVQNGR+EEA LFESK +WE++
Sbjct: 115 VMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELIS 174
Query: 218 ------------------------------SWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
SWN+++ G+ + L A+ +F+ PVRD
Sbjct: 175 WNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDV 234
Query: 248 VSWNTMITGYAQNNYLAEAQR-------------------------------LFEEAPVK 276
+W M+ Y Q+ L EA+R LFE P +
Sbjct: 235 FTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCR 294
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
+V +W ++SGY QNG + +AR +FD M +++ VSW A+IAGY QT + + M
Sbjct: 295 NVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMK 354
Query: 336 ----------------TCKNVASW----------------------NTMITGYAQSGEIT 357
TC +A+ N ++ Y + G I
Sbjct: 355 RDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIG 414
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A ++F+RM D ISW ++AGYA+ G+ +L +F MK G + P + +
Sbjct: 415 EAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFK----PDEITMLIWS 470
Query: 418 NLASLELGKQLHGQLVKVGFE-AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISW 475
N +L KVG + N L + SV E E V++ +
Sbjct: 471 N-----------NRLRKVGNTWVPTSLMNPLGNTWVTSTSVTEKQE--ERRVNRIGSVCI 517
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
++ + + + A LF + + I VG+L ACSHTGL ++GTEYFYSM++
Sbjct: 518 TFLLVIISAYKYRLHACHLFPCNWLLSLYLTCIHNVGVLLACSHTGLTDRGTEYFYSMSK 577
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
DYG+ PNSKHY CM+DLLGRAG L+EA NLM+NMPFEPDAATWGALLGA R++G EL E
Sbjct: 578 DYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGE 637
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
KAAE++F MEP NAGMYVLLSNLYA G+W DV K+RLKMR G++K+ GYSW+EVQNK+
Sbjct: 638 KAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKI 697
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F+VGD HPEKDRIYAYLEE++ K+K +G V KLVLHDV EEEK+ ML+YHSEKLA
Sbjct: 698 HKFTVGDCFHPEKDRIYAYLEEIDLKMKHEGHVSLVKLVLHDVEEEEKKRMLKYHSEKLA 757
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
VA+GIL+IPAGRPIRVMKNLRVCEDCHN IK+ISKIVGRLIILRD++RFH+ S G CSCG
Sbjct: 758 VAFGILTIPAGRPIRVMKNLRVCEDCHNVIKYISKIVGRLIILRDSHRFHYVSEGICSCG 817
Query: 776 DYW 778
DYW
Sbjct: 818 DYW 820
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/458 (45%), Positives = 293/458 (63%), Gaps = 31/458 (6%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
+ A D I + +I+THMRNG C AL VF+SMP ++ S+N M++GY+ N +L AR
Sbjct: 41 QKARDTYIVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARN 100
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+FD MPQ+D VSWNVM+SGYVR+ + A+ +F+ MP +D +SWN +L+ Y QNG + A
Sbjct: 101 LFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEA 160
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
RR+F+ ++ ISWN L+ YV+ + +A LF+ +SWN+++ G+ + L
Sbjct: 161 RRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLL 220
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
A+ +F+ PVRD +W M+ Y Q+ L EA+R+F+E P K + M++GYVQ K
Sbjct: 221 QARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKK 280
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
+D AR +F+AMP +N SWN +I+GY Q + ARELF+ MT ++ SW +I GY
Sbjct: 281 MDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGY--- 337
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
AQ+G+ E + + ++MKR G+ LNRS F L
Sbjct: 338 ----------------------------AQTGHYEKVMHMLVKMKRDGKSLNRSTFCCAL 369
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
STCA +A+L LGKQ+HGQ VK G++ GC VGNALL MYCKCGS+ EAY FE + KD+I
Sbjct: 370 STCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDII 429
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
SWNTM+AGYARHGFG+ AL++F+SMKT G KPD+ITM+
Sbjct: 430 SWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITML 467
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/675 (46%), Positives = 446/675 (66%), Gaps = 2/675 (0%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G++ AR++FD + + SWN M++GY N AR LF+ MP R+++SWN ++SGY
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+NG D AR++FD M E+N +SW L+ YV NG+++ A LF VSW ++ G
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIG 150
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
F++ R+ DA +++ +P +D ++ +MI G + + EA+ +F+E + V TWT MV
Sbjct: 151 FLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+GY QN +VD+AR IFD MPEK VSW +M+ GYVQ R++ A ELFE M K V + N
Sbjct: 211 TGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNA 270
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MI+G Q GEI AR +FD M + + SW +I + ++G+ ++L LFI M++ G R
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
S+LS CA+LASL GKQ+H QLV+ F+ +V + L+ MY KCG + ++ F+
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVE 524
KD+I WN++I+GYA HG G++AL +F M G KP+++T V LSACS+ G+VE
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + + SM +GV P + HY CMVD+LGRAGR +EA ++ +M EPDAA WG+LLGA
Sbjct: 451 EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CR + + ++AE A+ + E+EPEN+G Y+LLSN+YA+ GRW DV+++R M+ R V+K
Sbjct: 511 CRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSP 570
Query: 645 GYSWLEVQNKVHTFSVGD-TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G SW EV+NKVH F+ G HPE++ I L+EL+ L++ G+ LHDV EEEK
Sbjct: 571 GCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEK 630
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
+ L+YHSE+LAVAY +L + G PIRVMKNLRVC DCH AIK ISK+ R IILRD NR
Sbjct: 631 VNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANR 690
Query: 764 FHHFSGGSCSCGDYW 778
FHHF G CSC DYW
Sbjct: 691 FHHFRNGECSCKDYW 705
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 268/525 (51%), Gaps = 49/525 (9%)
Query: 30 ANTNPYPSKKTLKRHLNS-----KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF 84
+ T P P+ HL+ ++R I WN + + N A +F
Sbjct: 12 STTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF 71
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
+ MP R+ +S+N ++SGY+ NG++D AR+VFD MP+R++VSW ++ GYV N + A +
Sbjct: 72 DEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAES 131
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
LF MP+++ VSW ML G+ Q+G D A ++++ + +K+ I+ ++ + GR++EA
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+F+ + V++W +++ G+ + R+ DA+ IFD MP + EVSW +M+ GY QN +
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIE 251
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
+A+ LFE PVK V AM+SG Q G++ +AR +FD+M E+N SW +I + +
Sbjct: 252 DAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 325 MDMARELFEAM-----------------TCKNVASW----------------------NT 345
A +LF M C ++AS +
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RL 404
++T Y + GE+ ++ +FDR P D I W +II+GYA G E++L++F EM G +
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N F + LS C+ +E G +++ + V G + ++ M + G EA
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM 491
Query: 464 FEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ + V+ D W +++ H + + F + K + I+P++
Sbjct: 492 IDSMTVEPDAAVWGSLLGACRTH--SQLDVAEFCAKKLIEIEPEN 534
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/686 (45%), Positives = 444/686 (64%), Gaps = 3/686 (0%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA I+ G ++ AR F+ MP R S+N +++GY RN+ AA LF MP RD+
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 156 SWNTMLSGYA--QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
S+N ++SG + + DAA + + +S+ LL YV++G + +A LF+
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
VS+ L+GG + R+ +A+ +FD MP RD V+W M++GY Q + EA+ LF+E
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
P ++V +WTAM+SGY QNG+V+ AR +F+ MPE+N VSW AM+ GY+Q ++ A ELF
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFN 260
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
AM VA+ N M+ G+ Q G + A+ +F++M + D +W+A+I Y Q+ + ++L
Sbjct: 261 AMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALST 320
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM G R N S+L+ CA LA L+ G+++H +++ F+ F +AL+ MY K
Sbjct: 321 FREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIK 380
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG++++A F KD++ WN+MI GYA+HG G+ AL +F M+ G+ PD IT +G
Sbjct: 381 CGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGA 440
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L+ACS+TG V++G E F SM + + P ++HY+CMVDLLGR+G ++EA +L+KNMP EP
Sbjct: 441 LTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEP 500
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
DA WGAL+GACR++ E+AE AA+ + E+EP NAG YVLLS++Y + GRW D SK+R
Sbjct: 501 DAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRK 560
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVYSTK 692
+ R + K G SW+E +VH F+ GD L HPE I LE+L+ L + G+
Sbjct: 561 FISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGS 620
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLHD+ EE+K H LRYHSE+ AVAYG+L IP G PIRVMKNLRVC DCH+AIK I+KI
Sbjct: 621 FVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKIT 680
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R IILRD NRFHHF G CSC DYW
Sbjct: 681 SREIILRDANRFHHFKDGFCSCRDYW 706
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 228/466 (48%), Gaps = 43/466 (9%)
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP-ARQVFDQMP-Q 120
+N + + RN D+AL +F MP R SYNA+ISG L Q P A +P
Sbjct: 50 SYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFP 109
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+VS+ ++ GYVR+ L+ A LF+ MP+R+ VS+ +L G G + ARR+FD M
Sbjct: 110 PSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM 169
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+++ ++W +L+ Y Q GRI EA LF+ VVSW +++ G+ + + A+ +F+
Sbjct: 170 PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFE 229
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
MP R+EVSW M+ GY Q ++ +A LF P V AM+ G+ Q G VD A+ +
Sbjct: 230 VMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTV 289
Query: 301 FDAMPEKNTVSWNAMIAGYVQTK-----------------------------------RM 325
F+ M E++ +W+AMI Y Q + +
Sbjct: 290 FEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVL 349
Query: 326 DMARELFEAMT-CK---NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
D RE+ AM C +V + + +IT Y + G + A+ +F D + W ++I GY
Sbjct: 350 DYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGY 409
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAG 440
AQ G E +L +F +M+ G + + L+ C+ ++ G+++ + V G
Sbjct: 410 AQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPG 469
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ ++ + + G VEEA+ + + V+ D + W ++ H
Sbjct: 470 AEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 177/345 (51%), Gaps = 26/345 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ W ++ + + G A +F+ MP+R+ VS+ AMISGY NG+++ AR++F+
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+R+ VSW M+ GY++ + A LF MP+ V + N M+ G+ Q G DAA+ +F
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFES------KANW-EVVSWNSLMGGFV--- 227
++M E+++ +W+ ++ AY QN + EA F + N+ V+S ++
Sbjct: 291 EKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 228 --KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
++ + FD D + + +IT Y + L +A+R+F KD+ W +M+
Sbjct: 351 YGREVHAAMLRCSFD----MDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMI 406
Query: 286 SGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-- 339
+GY Q+G ++A IF M + +++ + T ++ RE+F +MT +
Sbjct: 407 TGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSI 466
Query: 340 ---VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
++ M+ +SG + A +L MP + D + W A++
Sbjct: 467 RPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/686 (45%), Positives = 444/686 (64%), Gaps = 3/686 (0%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA I+ G ++ AR F+ MP R S+N +++GY RN+ AA LF MP RD+
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 156 SWNTMLSGYA--QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
S+N ++SG + + DAA + + +S+ LL YV++G + +A LF+
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
VS+ L+GG + R+ +A+ +FD MP RD V+W M++GY Q + EA+ LF+E
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
P ++V +WTAM+SGY QNG+V+ AR +F+ MPE+N VSW AM+ GY+Q ++ A ELF
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFN 260
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
AM VA+ N M+ G+ Q G + A+ +F++M + D +W+A+I Y Q+ + ++L
Sbjct: 261 AMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALST 320
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM G R N S+L+ CA LA L+ G+++H +++ F+ F +AL+ MY K
Sbjct: 321 FREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIK 380
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG++++A F KD++ WN+MI GYA+HG G+ AL +F M+ G+ PD IT +G
Sbjct: 381 CGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGA 440
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L+ACS+TG V++G E F SM + + P ++HY+CMVDLLGR+G ++EA +L+KNMP EP
Sbjct: 441 LTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEP 500
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
DA WGAL+GACR++ E+AE AA+ + E+EP NAG YVLLS++Y + GRW D SK+R
Sbjct: 501 DAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRK 560
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVYSTK 692
+ R + K G SW+E +VH F+ GD L HPE I LE+L+ L + G+
Sbjct: 561 FISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGS 620
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLHD+ EE+K H LRYHSE+ AVAYG+L IP G PIRVMKNLRVC DCH+AIK I+KI
Sbjct: 621 FVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKIT 680
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R IILRD NRFHHF G CSC DYW
Sbjct: 681 SREIILRDANRFHHFKDGFCSCRDYW 706
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 228/465 (49%), Gaps = 43/465 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP-ARQVFDQMP-QR 121
+N + + RN D+AL +F MP R SYNA+ISG L Q P A +P
Sbjct: 51 YNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPP 110
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
+VS+ ++ GYVR+ L+ A LF+ MP+R+ VS+ +L G G + ARR+FD M
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+++ ++W +L+ Y Q GRI EA LF+ VVSW +++ G+ + + A+ +F+
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
MP R+EVSW M+ GY Q ++ +A LF P V AM+ G+ Q G VD A+ +F
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 302 DAMPEKNTVSWNAMIAGYVQTK-----------------------------------RMD 326
+ M E++ +W+AMI Y Q + +D
Sbjct: 291 EKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 327 MARELFEAMT-CK---NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
RE+ AM C +V + + +IT Y + G + A+ +F D + W ++I GYA
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAGC 441
Q G E +L +F +M+ G + + L+ C+ ++ G+++ + V G
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ ++ + + G VEEA+ + + V+ D + W ++ H
Sbjct: 471 EHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 215/460 (46%), Gaps = 82/460 (17%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ W ++ + + G A +F+ MP+R+ VS+ AMISGY NG+++ AR++F+
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+R+ VSW M+ GY++ + A LF MP+ V + N M+ G+ Q G DAA+ +F
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFES------KANW-EVVSWNSLMGGFV--- 227
++M E+++ +W+ ++ AY QN + EA F + N+ V+S ++
Sbjct: 291 EKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 228 --KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
++ + FD D + + +IT Y + L +A+R+F KD+ W +M+
Sbjct: 351 YGREVHAAMLRCSFD----MDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMI 406
Query: 286 SGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-- 339
+GY Q+G ++A IF M + +++ + T ++ RE+F +MT +
Sbjct: 407 TGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSI 466
Query: 340 ---VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG--------------- 380
++ M+ +SG + A +L MP + D + W A++
Sbjct: 467 RPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAK 526
Query: 381 -------------------YAQSGYSEDS--LRLFIEMKRYGERLNRSP----------- 408
Y G ED+ +R FI + LN+SP
Sbjct: 527 KLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSR----NLNKSPGCSWIEYDKRV 582
Query: 409 --FTS--VLSTCANLASLELGKQLHGQLVKVGFEA-GCFV 443
FTS VL+ + A L + ++L G L++ G+ A G FV
Sbjct: 583 HLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFV 622
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/686 (45%), Positives = 444/686 (64%), Gaps = 3/686 (0%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA I+ G ++ AR F+ MP R S+N +++GY RN+ AA LF MP RD+
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 156 SWNTMLSGYA--QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
S+N ++SG + + DAA + + +S+ LL YV++G + +A LF+
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
VS+ L+GG + R+ +A+ +FD MP RD V+W M++GY Q + EA+ LF+E
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
P ++V +WTAM+SGY QNG+V+ AR +F+ MPE+N VSW AM+ GY+Q ++ A ELF
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFN 260
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
AM VA+ N M+ G+ Q G + A+ +F++M + D +W+A+I Y Q+ + ++L
Sbjct: 261 AMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALST 320
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM G R N S+L+ CA LA L+ G+++H +++ F+ F +AL+ MY K
Sbjct: 321 FREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIK 380
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG++++A F KD++ WN+MI GYA+HG G+ AL +F M+ G+ PD IT +G
Sbjct: 381 CGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGA 440
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L+ACS+TG V++G E F SM + + P ++HY+CMVDLLGR+G ++EA +L+KNMP EP
Sbjct: 441 LTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEP 500
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
DA WGAL+GACR++ E+AE AA+ + E+EP NAG YVLLS++Y + GRW D SK+R
Sbjct: 501 DAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRK 560
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVYSTK 692
+ R + K G SW+E +VH F+ GD L HPE I LE+L+ L + G+
Sbjct: 561 FISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGS 620
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLHD+ EE+K H LRYHSE+ AVAYG+L IP G PIRVMKNLRVC DCH+AIK I+KI
Sbjct: 621 FVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKIT 680
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R I+LRD NRFHHF G CSC DYW
Sbjct: 681 SREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 228/465 (49%), Gaps = 43/465 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP-ARQVFDQMP-QR 121
+N + + RN D+AL +F MP R SYNA+ISG L Q P A +P
Sbjct: 51 YNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPP 110
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
+VS+ ++ GYVR+ L+ A LF+ MP+R+ VS+ +L G G + ARR+FD M
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+++ ++W +L+ Y Q GRI EA LF+ VVSW +++ G+ + + A+ +F+
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
MP R+EVSW M+ GY Q ++ +A LF P V AM+ G+ Q G VD A+ +F
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 302 DAMPEKNTVSWNAMIAGYVQTK-----------------------------------RMD 326
+ M E++ +W+AMI Y Q + +D
Sbjct: 291 EKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 327 MARELFEAMT-CK---NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
RE+ AM C +V + + +IT Y + G + A+ +F D + W ++I GYA
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAGC 441
Q G E +L +F +M+ G + + L+ C+ ++ G+++ + V G
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ ++ + + G VEEA+ + + V+ D + W ++ H
Sbjct: 471 EHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 215/460 (46%), Gaps = 82/460 (17%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ W ++ + + G A +F+ MP+R+ VS+ AMISGY NG+++ AR++F+
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+R+ VSW M+ GY++ + A LF MP+ V + N M+ G+ Q G DAA+ +F
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFES------KANW-EVVSWNSLMGGFV--- 227
++M E+++ +W+ ++ AY QN + EA F + N+ V+S ++
Sbjct: 291 EKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 228 --KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
++ + FD D + + +IT Y + L +A+R+F KD+ W +M+
Sbjct: 351 YGREVHAAMLRCSFD----MDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMI 406
Query: 286 SGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-- 339
+GY Q+G ++A IF M + +++ + T ++ RE+F +MT +
Sbjct: 407 TGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSI 466
Query: 340 ---VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG--------------- 380
++ M+ +SG + A +L MP + D + W A++
Sbjct: 467 RPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAK 526
Query: 381 -------------------YAQSGYSEDS--LRLFIEMKRYGERLNRSP----------- 408
Y G ED+ +R FI + LN+SP
Sbjct: 527 KLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSR----NLNKSPGCSWIEYDKRV 582
Query: 409 --FTS--VLSTCANLASLELGKQLHGQLVKVGFEA-GCFV 443
FTS VL+ + A L + ++L G L++ G+ A G FV
Sbjct: 583 HLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFV 622
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/673 (45%), Positives = 434/673 (64%), Gaps = 1/673 (0%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
GQ++ AR+ FD + + + SWN ++SGY N AR +F+ MP+R++VSWN ++SGY
Sbjct: 31 GQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYI 90
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+N + AR +F+ M E+N +SW ++ YVQ G + EA +LF VSW + GG
Sbjct: 91 KNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGG 150
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+ R+ DA+ ++D MP +D V+ MI G + + EA+ +F+E ++V TWT M+
Sbjct: 151 LIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMI 210
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+GY QN +VD AR +F+ MPEK VSW +M+ GY + R++ A E FE M K V + N
Sbjct: 211 TGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA 270
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MI + GEI AR +FD+M D +W +I Y + G+ ++L LF +M+R G R +
Sbjct: 271 MIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPS 330
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
S+LS CA LASL+ G+Q+H LV+ F+ +V + L+ MY KCG + +A F+
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
KD+I WN++I+GYA HG G++AL +F M G P+ +T++ IL+ACS+ G +E+
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEE 450
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E F SM + V P +HY+C VD+LGRAG++D+A L+ +M +PDA WGALLGAC
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGAC 510
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
+ + + +LAE AA+ +FE+EPENAG Y+LLS++ A+ +WGDV+++R MR + V K G
Sbjct: 511 KTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPG 570
Query: 646 YSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
SW+EV KVH F+ G HPE+ I LE+ + L++ G+ VLHDV EEEK
Sbjct: 571 CSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKV 630
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L HSE+LAVAYG+L +P G PIRVMKNLRVC DCH AIK ISK+ R IILRD NRF
Sbjct: 631 DSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRF 690
Query: 765 HHFSGGSCSCGDY 777
HHF+ G CSC DY
Sbjct: 691 HHFNNGECSCRDY 703
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 256/551 (46%), Gaps = 80/551 (14%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
I WN ++ + NG A +F+ MP R+ VS+N ++SGY+ N ++ AR VF+ MP+
Sbjct: 48 IGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPE 107
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
R++VSW M+ GYV+ + A LF MP+R+ VSW M G G D AR+++D M
Sbjct: 108 RNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMM 167
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
K+ ++ ++ + GR++EA +F+ V++W +++ G+ + KR+ A+ +F+
Sbjct: 168 PGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFE 227
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
MP + EVSW +M+ GY + + +A+ FE P+K V AM+ + G++ +AR +
Sbjct: 228 VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRV 287
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW 343
FD M +++ +W MI Y + A ELF M C +AS
Sbjct: 288 FDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASL 347
Query: 344 ----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
+ ++T Y + GE+ A+ +FDR P D I W +II+GY
Sbjct: 348 QYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGY 407
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
A G E++L++F EM G N+ ++L+ C+ LE G ++ FE
Sbjct: 408 ASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEI--------FE--- 456
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
++ +C +VE ++ + R G A+ L SM
Sbjct: 457 ----SMESKFCVTPTVEH---------------YSCTVDMLGRAGKVDKAMELINSMT-- 495
Query: 502 GIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
IKPD +L AC S L E + + + + N+ Y + + +
Sbjct: 496 -IKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPE-----NAGPYILLSSINASRSK 549
Query: 559 LDEAQNLMKNM 569
+ + KNM
Sbjct: 550 WGDVAEMRKNM 560
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 218/452 (48%), Gaps = 52/452 (11%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
+K + ++RN + + ++ W + +++ G A +F MP R+ VS+ M
Sbjct: 90 IKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFG 149
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G + G++D AR+++D MP +D+V+ MI G R + AR +F+ M +R+V++W TM
Sbjct: 150 GLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTM 209
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
++GY QN D AR++F+ M EK E+SW +L Y +GRIE+A FE V++ N
Sbjct: 210 ITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---- 276
+++ + + A+ +FD+M RD +W MI Y + + EA LF + +
Sbjct: 270 AMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRP 329
Query: 277 -----------------------------------DVFTWTAMVSGYVQNGKVDEARMIF 301
DV+ + +++ YV+ G++ +A+++F
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEIT 357
D P K+ + WN++I+GY + A ++F M T N + ++T + G++
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLE 449
Query: 358 HARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
+F+ M C++ ++ + ++G + ++ L M + + + + ++
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTI---KPDATVWGAL 506
Query: 413 LSTCANLASLELGKQLHGQLVKVGFE-AGCFV 443
L C + L+L + +L ++ E AG ++
Sbjct: 507 LGACKTHSRLDLAEVAAKKLFEIEPENAGPYI 538
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 313/689 (45%), Positives = 445/689 (64%), Gaps = 3/689 (0%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V+ NA I+ + G ++ AR FD MP R S+N +I+GY RN AA LF MP R
Sbjct: 18 VAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSR 77
Query: 153 DVVSWNTMLSGYA--QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
D+ S+N +++G + ++ DAA + L + +S+ LL YV++G + +A LF
Sbjct: 78 DLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQ 137
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
V++ L+GGF+ R+ +A+ +FD MP +D V+ M++GY Q + EA+ LF
Sbjct: 138 MPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALF 197
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+E P ++V +WTAM+SGY QNGKV AR +F+ MP++N VSW AM+ GY+Q ++ A +
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAED 257
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
LF AM VA+ N M+ G+ Q G + A+ +F+RM D +W+A+I Y Q+ + ++
Sbjct: 258 LFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEA 317
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L F EM G R N + F S+L+ CA LA+ + G++LH +++ F+ F +AL+ M
Sbjct: 318 LSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITM 377
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG++++A F KDV+ WN+MI GYA+HG G++AL +F+ ++ + PD IT
Sbjct: 378 YIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITY 437
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+G+L+ACS+TG V++G E F SM + + + HY+CMVDLLGRAG +DEA +L+ NMP
Sbjct: 438 IGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMP 497
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
EPDA WGAL+GACR++ E+AE AA+ + E+EP +AG YVLLS++Y ++GRW D S
Sbjct: 498 VEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASD 557
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVY 689
+R + R + K G SW+E VH F+ GD L HPE I LEEL+ L + G+
Sbjct: 558 MRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSA 617
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
VLHDV EE+K LRYHSE+ AVAYG+L +PAG PIRVMKNLRVC DCH+AIK I+
Sbjct: 618 DGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLIT 677
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KI R IILRD NRFHHF G CSC DYW
Sbjct: 678 KITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 196/340 (57%), Gaps = 14/340 (4%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
++R+G A+ +F+ MP R+ V+Y ++ G+L G+++ AR++FD+MP +D+V+ M+
Sbjct: 122 YVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAML 181
Query: 131 SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
SGY + ++ AR LF+ MPKR+VVSW M+SGYAQNG AR++F+ M ++NE+SW
Sbjct: 182 SGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTA 241
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+L Y+Q G +E+A LF + + V + N++M GF + + AK +F+RM RD+ +W
Sbjct: 242 MLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTW 301
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP- 305
+ MI Y QN +L EA F E + + ++ ++++ D R + AM
Sbjct: 302 SAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLR 361
Query: 306 ---EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
+ + + +A+I Y++ +D A+ +F K+V WN+MITGYAQ G A +
Sbjct: 362 CSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGI 421
Query: 363 FD-----RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
FD RM D I++ ++ + +G ++ +F M
Sbjct: 422 FDDLRLARMAP-DGITYIGVLTACSYTGKVKEGREIFNSM 460
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 230/469 (49%), Gaps = 49/469 (10%)
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP-ARQVFDQMP-Q 120
+N I + RN D+AL +F+ MP R SYNA+I+G L P A +P
Sbjct: 50 SYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLP 109
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+VS+ ++ GYVR+ L+ A LF MP+R+ V++ +L G+ G + AR++FD M
Sbjct: 110 PSVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEM 169
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+K+ ++ +L+ Y Q GRI EA LF+ VVSW +++ G+ + ++ A+ +F+
Sbjct: 170 PDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFE 229
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
MP R+EVSW M+ GY Q ++ +A+ LF P V AM+ G+ Q+G VD A+ +
Sbjct: 230 VMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAM 289
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-------------------- 340
F+ M ++ +W+AMI Y Q + + A F M C+ +
Sbjct: 290 FERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATA 349
Query: 341 ------------ASWNT-------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
S++T +IT Y + G + A+ +F+ D + W ++I GY
Sbjct: 350 DYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGY 409
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
AQ G E++L +F +++ + + VL+ C+ ++ G+++ + G +
Sbjct: 410 AQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSM---GMNSSI 466
Query: 442 FVGNA----LLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+G A ++ + + G V+EA + V+ D I W ++ H
Sbjct: 467 RLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMH 515
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 31/343 (9%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
R + V A ++ V+ G ++ AR FDAMP + T S+NA+IAGY + D
Sbjct: 7 RFLPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDA 66
Query: 328 ARELFEAMTCKNVASWNTMITGYA-QSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSG 385
A LF M +++ S+N +I G + + + A +P +S+ +++ GY + G
Sbjct: 67 ALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHG 126
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
D++RLF +M ER N +T +L + + ++L ++ +
Sbjct: 127 LLADAIRLFHQMP---ER-NHVTYTVLLGGFLDAGRVNEARKLFDEMP----DKDVVART 178
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
A+L YC+ G + EA F+E+ ++V+SW MI+GYA++G A LFE M P
Sbjct: 179 AMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVM------P 232
Query: 506 D--DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC--MVDLLGRAGRLDE 561
D +++ +L G VE + F +M P+ C M+ G+ G +D
Sbjct: 233 DRNEVSWTAMLVGYIQAGHVEDAEDLFNAM-------PDHPVAACNAMMVGFGQHGMVDA 285
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
A+ + + M D TW A++ ++Y + E +A EM
Sbjct: 286 AKAMFERMCARDD-GTWSAMI---KVYEQNEFLMEALSTFREM 324
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 113/270 (41%), Gaps = 53/270 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D + N + ++G D+A +F M R +++AMI Y N L A F +
Sbjct: 264 DHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFRE 323
Query: 118 MPQR---------------------------------------DLVSWNVMISGYVRNKS 138
M R D+ + + +I+ Y++ +
Sbjct: 324 MLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGN 383
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L A+ +F M +DVV WN+M++GYAQ+G + A IFD + + + I++ G+L A
Sbjct: 384 LDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTA 443
Query: 195 YVQNGRIEEACMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G+++E +F S ++ ++ + + +A + + MPV D +
Sbjct: 444 CSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAI 503
Query: 249 SWNTMITG--YAQNNYLAE--AQRLFEEAP 274
W ++ +N +AE A++L E P
Sbjct: 504 IWGALMGACRMHKNAEIAEVAAKKLLELEP 533
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 306/674 (45%), Positives = 433/674 (64%), Gaps = 1/674 (0%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G+++ AR+ FD + + + SWN ++SGY N AR LF+ M +R+VVSWN ++SGY
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+N AR +F+ M E+N +SW ++ Y+Q G + EA LF VSW + GG
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGG 150
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+ R+ A+ ++D MPV+D V+ MI G + + EA+ +F+E ++V TWT M+
Sbjct: 151 LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMI 210
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+GY QN +VD AR +F+ MPEK VSW +M+ GY + R++ A E FE M K V + N
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA 270
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MI G+ + GEI+ AR +FD M D +W +I Y + G+ ++L LF +M++ G R +
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
S+LS CA LASL+ G+Q+H LV+ F+ +V + L+ MY KCG + +A F+
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
KD+I WN++I+GYA HG G++AL +F M + G P+ +T++ IL+ACS+ G +E+
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E F SM + V P +HY+C VD+LGRAG++D+A L+++M +PDA WGALLGAC
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC 510
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
+ + + +LAE AA+ +FE EP+NAG YVLLS++ A+ +WGDV+ VR MR V K G
Sbjct: 511 KTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPG 570
Query: 646 YSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
SW+EV KVH F+ G HPE+ I LE+ + L++ G+ VLHDV EEEK
Sbjct: 571 CSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKV 630
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L HSE+LAVAYG+L +P G PIRVMKNLRVC DCH AIK ISK+ R IILRD NRF
Sbjct: 631 DSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRF 690
Query: 765 HHFSGGSCSCGDYW 778
HHF+ G CSC DYW
Sbjct: 691 HHFNNGECSCRDYW 704
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 195/371 (52%), Gaps = 14/371 (3%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
+K + ++RN + + ++ W + +M+ G A +F MP R+ VS+ M
Sbjct: 90 IKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFG 149
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G + +G++D AR+++D MP +D+V+ MI G R + AR +F+ M +R+VV+W TM
Sbjct: 150 GLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
++GY QN D AR++F+ M EK E+SW +L Y +GRIE+A FE V++ N
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF- 279
+++ GF + + A+ +FD M RD +W MI Y + + EA LF + + V
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 280 TWTAMVS--------GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
++ +++S +Q G+ A ++ + V+ + ++ YV+ + A+ +
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVA-SVLMTMYVKCGELVKAKLV 388
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYS 387
F+ + K++ WN++I+GYA G A +F MP ++ AI+ + +G
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 388 EDSLRLFIEMK 398
E+ L +F M+
Sbjct: 449 EEGLEIFESME 459
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 302/794 (38%), Positives = 462/794 (58%), Gaps = 80/794 (10%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ +++NG A +F++MP R S+N+M++GY + Q+ A +F QMPQR+L
Sbjct: 129 WNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNL 188
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMP--------------------------------- 150
V+W VMISGYVR + ++F MM
Sbjct: 189 VTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPL 248
Query: 151 ------KRDVVSWNTMLSGYAQNGYA-DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+ DVV ++L+ Y ++ A D A + FD M+E+NE +W+ ++AA GRI+
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDA 308
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
A ++ + S +L+ G + R+ +A+ +F+++P VSWN MITGY QN +
Sbjct: 309 AIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMV 368
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK---------------- 307
EA+ LF+ P ++ +W M++GY QNG+ +EA + A+
Sbjct: 369 DEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLAC 428
Query: 308 -----------------------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
N+ NA+I+ Y + + M+ R++F M K+ SWN
Sbjct: 429 SHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWN 488
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+ I Q+ + AR++FD M D +SW II+ YAQ+ ++++ F M E+
Sbjct: 489 SFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKP 548
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N T +LS C L S +LG+Q+H +K G ++ V NAL+ MY KCG + ++ F
Sbjct: 549 NSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVF 607
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + ++D+ +WNT I G A+HG G++A+ ++E M++VG+ P+++T VG+L+ACSH GLV+
Sbjct: 608 DSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVD 667
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G ++F SM+RDYG+ P +HY CMVDLLGR G + A+ + +MP EPD W ALLGA
Sbjct: 668 EGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGA 727
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+++ E+ +AAE +F EP NAG YV+LSN+Y++ G W +V+++R M+ RGV K
Sbjct: 728 CKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEP 787
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW++++NKVH+F GD H + + I L++L L+ G+V T+ VLHD+ EE+KE
Sbjct: 788 GCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKE 847
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L YHSEKLAVAYG+L P G PI++MKNLR+C DCH IK +S + R I +RD NRF
Sbjct: 848 SSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRF 907
Query: 765 HHFSGGSCSCGDYW 778
HHF GSCSCGD+W
Sbjct: 908 HHFRNGSCSCGDFW 921
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 271/531 (51%), Gaps = 76/531 (14%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G+L AR+VFD MP RD+++WN MIS Y + L AR LF+ + +V + +LSGYA
Sbjct: 47 GRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYA 106
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ G ARR+FD M E+N ++WN +++ YVQNG I A LF++ + +V SWNS++ G
Sbjct: 107 RLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTG 166
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA-----------------------QNNY 262
+ +++ DA +F +MP R+ V+W MI+GY Q+N+
Sbjct: 167 YCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNF 226
Query: 263 --------------LAEAQR--LFEEAPVKDVFTWTAMVSGYVQNGK-VDEARMIFDAMP 305
+ E R + + DV T++++ Y ++ +D A FD M
Sbjct: 227 ASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMV 286
Query: 306 EKNTVSWNAMIA-------------------------------GYVQTKRMDMARELFEA 334
E+N +W+ MIA G + R+ AR LFE
Sbjct: 287 ERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQ 346
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+ V SWN MITGY Q+G + A+ LFDRMP + ISWA +IAGYAQ+G SE++L L
Sbjct: 347 IPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLL 406
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+ R G + S TS C+++ +LE G+Q+H VK G + +V NAL+ MY KC
Sbjct: 407 QALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKC 466
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
++E F + KD +SWN+ IA ++ +DA +F++M + D ++ I+
Sbjct: 467 RNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTTII 522
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
SA + ++ E+F +M ++ PNS T ++ + G G Q +
Sbjct: 523 SAYAQAERGDEAVEFFKTMLHEHEK-PNSPILTILLSVCGGLGSAKLGQQI 572
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 200/365 (54%), Gaps = 11/365 (3%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
RL +A+ +FD MP RD ++WN+MI+ Y + L +A+ LF+ +V T T ++SGY +
Sbjct: 48 RLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYAR 107
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
G+V +AR +FD MPE+NTV+WNAM++ YVQ + MAR LF+AM ++V SWN+M+TGY
Sbjct: 108 LGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGY 167
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
S ++ A NLF +MPQ + ++W +I+GY + +F M G ++S F
Sbjct: 168 CHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFA 227
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS-VEEAYHAFEEIVD 469
SVLS L L + + L ++K GFE+ +G ++L +Y + S ++ A F+ +V+
Sbjct: 228 SVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVE 287
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
++ +W+TMIA + HG DA + V P ++ L+ C G + +
Sbjct: 288 RNEYTWSTMIAALS-HGGRIDAAIAVYGRDPVKSIPSQTALLTGLARC---GRITEARIL 343
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F + P + M+ + G +DEA+ L MPF + +W ++ G
Sbjct: 344 FEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELFDRMPFR-NTISWAGMIAGYAQNG 397
Query: 590 KTELA 594
++E A
Sbjct: 398 RSEEA 402
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 302/766 (39%), Positives = 463/766 (60%), Gaps = 48/766 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
++ WN +T + A +F+ MP R+SVS+ MISGY+ A VF +M
Sbjct: 294 NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMC 353
Query: 119 -----PQR---------------------------------DLVSWNVMISGYVRNKSLS 140
P + D+V + +++ Y RN SL
Sbjct: 354 RTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLD 413
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
A + FE MP+R+ SW TM++ +AQ G D A ++++R+ E+ + ++ AY Q GR
Sbjct: 414 LAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGR 473
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
I++A ++F+ N VV+WN+++ G+ + L +AK +F +MPV++ SW MI G+ QN
Sbjct: 474 IQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQN 533
Query: 261 NYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSW 312
EA L E V ++T+ +S G V+ R+I + N+
Sbjct: 534 EESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVM 593
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
N +I+ Y + ++ +F + K+ SWN++I+G +++ + AR +F++MP+ D +
Sbjct: 594 NGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVV 653
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
SW AII+ Y Q+G+ E +L LF++M G + N+ TS+LS C NL +++LG+Q H +
Sbjct: 654 SWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALI 713
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
K+GF+ FVGN+L+ MY KCG E+ + FEE+ + D+I+WN ++ G A++G GK+A+
Sbjct: 714 FKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAI 772
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+FE M+ GI PD ++ +G+L ACSH GLV++G +F SM + YG++P HYTCMVDL
Sbjct: 773 KIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDL 832
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG L EA+ L++NMP +PD+ W ALLGACR++ EL ++ AE +F+M + Y
Sbjct: 833 LGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATY 892
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSNL+A+ G W V+++R M+D+G+ K G SW++V+NK+H F GD H + + IY
Sbjct: 893 VLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIY 952
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
+ L+E + G++ T VLHDV EE+K++ L YHSEKLAV +GILS P G PI+++
Sbjct: 953 SALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQII 1012
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLR+C DCH +K +SK+ R II+RD NRFHHF GSCSCGDYW
Sbjct: 1013 KNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 194/603 (32%), Positives = 306/603 (50%), Gaps = 107/603 (17%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G+++ AR+VF++M QRD+VSWN MI+GY +N + AR LF+ +++ +W +L+GYA
Sbjct: 185 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYA 244
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ G + AR +F+ M E+N +SWN +++ YVQNG ++ A LF+ V SWNS++ G
Sbjct: 245 KEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTG 304
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA------------ 273
+ R+ +A+ +FD+MP R+ VSW MI+GY + EA +F +
Sbjct: 305 YCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIF 364
Query: 274 --------------------PVK-------DVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
P+ DV +A+++ Y +NG +D A F+ MPE
Sbjct: 365 VVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPE 424
Query: 307 KNTVSWNAMIAGYVQTKRMD-------------------------------MARELFEAM 335
+N SW MIA + Q R+D AR +F+ +
Sbjct: 425 RNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEI 484
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
NV +WN +I GY Q+G + A++LF +MP + SWAA+IAG+ Q+ S ++L L I
Sbjct: 485 LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLI 544
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
E+ R G + S FTS LS CAN+ +E+G+ +H +K G + +V N L+ MY KCG
Sbjct: 545 ELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCG 604
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAG-------------------------------YAR 484
+VE+ H F I KD +SWN++I+G Y +
Sbjct: 605 NVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQ 664
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
G G+ AL LF M GIKP+ +T+ +LSAC + G ++ G E F+++ G
Sbjct: 665 AGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG-EQFHALIFKLGFDTFLF 723
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
++ + + G ++ + + MP E D TW A+L C G L ++A ++ +M
Sbjct: 724 VGNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQNG---LGKEAIKIFEQM 778
Query: 605 EPE 607
E E
Sbjct: 779 EVE 781
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 161/599 (26%), Positives = 296/599 (49%), Gaps = 73/599 (12%)
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
+R+KS A+N + P+ + NT + + G + ARR+F+ M++++ +SWN ++
Sbjct: 155 IRHKS--GAKN--KETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMIN 210
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
Y QNG+++EA +LF++ + +W L+ G+ K+ R+ +A+ +F+ M R+ VSWN M
Sbjct: 211 GYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAM 270
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
I+GY QN L A++LF+E P K+V +W ++V+GY ++ EAR +FD MPE+N+VSW
Sbjct: 271 ISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWM 330
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVASWN--------TMITG---------------- 349
MI+GYV A ++F M C+ VA + + ITG
Sbjct: 331 VMISGYVHISDYWEAWDVFVKM-CRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIK 389
Query: 350 ----------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
Y ++G + A + F+ MP+ + SW +IA +AQ G +D+++L
Sbjct: 390 TGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQL 449
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
+ +R E+ + T++++ A + ++ + + +++ A NA++ Y +
Sbjct: 450 Y---ERVPEQTVATK-TAMMTAYAQVGRIQKARLIFDEILNPNVVA----WNAIIAGYTQ 501
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
G ++EA F+++ K+ SW MIAG+ ++ ++AL L + G P D +
Sbjct: 502 NGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSA 561
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
LSAC++ G VE G +S+ G NS ++ + + G +++ ++ + + +
Sbjct: 562 LSACANIGDVEIG-RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK- 619
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVR 632
D +W +L+ A V+FE P+ + + + + Y +G +
Sbjct: 620 DTVSWNSLISGL----SENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLF 675
Query: 633 LKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
L M RG+K ++T S L + +G+ H L FKL D F++
Sbjct: 676 LDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHA-----------LIFKLGFDTFLF 723
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/567 (25%), Positives = 259/567 (45%), Gaps = 90/567 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K + D+ + + + RNG D A+H F +MP R+ S+ MI+ + G+LD A Q
Sbjct: 389 KTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQ 448
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+++++P++ + + M++ Y + + AR +F+ + +VV+WN +++GY QNG A
Sbjct: 449 LYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEA 508
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-MLFESKANWEVVSWNSLMGGFVKQKRL 232
+ +F +M KN SW ++A +VQN EA +L E + V S +S +
Sbjct: 509 KDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANI 568
Query: 233 GDAKW--IFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
GD + + + ++ +N+ +I+ YA+ + + +F VKD +W +++
Sbjct: 569 GDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLI 628
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
SG +N +D+AR++F+ MP+++ VSW A+I+ YVQ ++A +LF M + +
Sbjct: 629 SGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQL 688
Query: 346 MIT---------GYAQSGEITHAR-----------------------------NLFDRMP 367
+T G + GE HA +F+ MP
Sbjct: 689 TVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYEDGFCVFEEMP 748
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+HD I+W A++ G AQ+G ++++++F +M+ G ++ F VL C+
Sbjct: 749 EHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACS---------- 798
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
H LV G+ M K G + YH + M+ R G+
Sbjct: 799 -HAGLVDEGWA-------HFNSMTQKYGIMPLVYH------------YTCMVDLLGRAGY 838
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSK 544
+A L E+M +KPD + +L AC VE G E + M + P S
Sbjct: 839 LSEAEALIENMP---VKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTK-----PKSA 890
Query: 545 HYTCMVDLLGRAGRLD---EAQNLMKN 568
Y + +L G D E + LMK+
Sbjct: 891 TYVLLSNLFASQGMWDKVAEIRKLMKD 917
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 287/596 (48%), Positives = 404/596 (67%), Gaps = 1/596 (0%)
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK-RLGDAKWIFDRM 242
N IS N ++ ++++G + A +FES V+WNS++ G+ ++ ++ A+ +FDR+
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
P D S+N M+ Y N + A+ F++ PVKD +W M+SG+ QNG +D+AR +F
Sbjct: 64 PEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFL 123
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
MP +N+VSWNAMI+GYV++ +D+A++LFE ++V +W MITG+ + G+I A
Sbjct: 124 VMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKY 183
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F+ MP + ++W A+IAGY ++ +E+ L+LF M G R N S +SVL C+NL++L
Sbjct: 184 FEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSAL 243
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LGKQ+H + K G +LL MYCKCG +E+A+ F + KDV++WN MI+GY
Sbjct: 244 KLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGY 303
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A+HG G+ AL LF+ M+ G+KPD IT V +LSAC+H G V+ G EYF SM RDYGV
Sbjct: 304 AQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAK 363
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
HYTC+VDLLGR G+L EA +L+K MPF+P +A +G LLGACR++ ELAE AA+ +
Sbjct: 364 PDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLL 423
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
++PE+A YV L+N+YAA RW V+ VR M+D V K GYSW+EV++ VH F GD
Sbjct: 424 NLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGD 483
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
+HPE I+ L ELE K++ G+V + LHDVGEE+K+ +L HSEKLA+AYG++
Sbjct: 484 RIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIR 543
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+P G PIRV KNLRVC DCH+A K+IS I GR+II+RD RFHHF G CSCGDYW
Sbjct: 544 MPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV-RNKSLSAARNLFEMMPK 151
+S N +I+ ++ +G L+ A +VF+ M + V+WN M++GY R + AR LF+ +P+
Sbjct: 6 ISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPE 65
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
D+ S+N ML+ Y N ++AR FD+M K+ SWN +++ + QNG +++A LF
Sbjct: 66 PDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVM 125
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
VSWN+++ G+V+ L AK +F+ PVR V+W MITG+ + + A++ FE
Sbjct: 126 PVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFE 185
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDM 327
E P+K++ TW AM++GY++N + + +F M E N S ++++ G + +
Sbjct: 186 EMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKL 245
Query: 328 ARELFEAMTCKNVASWN-----TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+++ + + CK+ SWN ++++ Y + G++ A LF MPQ D ++W A+I+GYA
Sbjct: 246 GKQVHQ-LICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYA 304
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEA 439
Q G E +L LF +M+ G + + F +VLS C + ++LG + +V+ G EA
Sbjct: 305 QHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEA 362
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 205/390 (52%), Gaps = 68/390 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL-LNGQLDPARQVFDQMPQRDL 123
N IT H+R+G +SAL VF SM +++V++N+M++GY G++ ARQ+FD++P+ D+
Sbjct: 9 NRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDI 68
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
S+N+M++ Y+ N + +AR F+ MP +D SWNTM+SG++QNG D AR +F M +
Sbjct: 69 FSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR 128
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
N +SWN +++ YV++G ++ A LFE VV+W +++ GF+K ++ A+ F+ MP
Sbjct: 129 NSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMP 188
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFE-------------------------------- 271
+++ V+WN MI GY +N +LF+
Sbjct: 189 MKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQ 248
Query: 272 ------EAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
++PV ++ T+++S Y + G +++A +F MP+K+ V+WNAMI+GY Q
Sbjct: 249 VHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGA 308
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ A LF+ M D + D I++ A+++ +
Sbjct: 309 GEKALYLFDKMR---------------------------DEGMKPDWITFVAVLSACNHA 341
Query: 385 GYSEDSLRLFIEMKR-YGERLNRSPFTSVL 413
G+ + + F M R YG +T V+
Sbjct: 342 GFVDLGIEYFNSMVRDYGVEAKPDHYTCVV 371
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 177/333 (53%), Gaps = 23/333 (6%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P+P DI +N+ + ++ N +SA F+ MP + + S+N MISG+ NG +D AR
Sbjct: 64 PEP----DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQAR 119
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
++F MP R+ VSWN MISGYV + L A+ LFE+ P R VV+W M++G+ + G +
Sbjct: 120 ELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIEL 179
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVK 228
A + F+ M KN ++WN ++A Y++N + E LF ES S +S++ G
Sbjct: 180 AEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSN 239
Query: 229 QKRLGDAKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
L K + ++ + VSWN ++++ Y + L +A +LF P KDV TW A
Sbjct: 240 LSALKLGKQV-HQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNA 298
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCK- 338
M+SGY Q+G ++A +FD M ++ +++ A+++ +D+ E F +M
Sbjct: 299 MISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDY 358
Query: 339 ----NVASWNTMITGYAQSGEITHARNLFDRMP 367
+ ++ + G++ A +L +MP
Sbjct: 359 GVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMP 391
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 296/794 (37%), Positives = 468/794 (58%), Gaps = 80/794 (10%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN I+ +++NG A +F++MP R S+N+M++GY + Q+ AR +F++MP+R+L
Sbjct: 130 WNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNL 189
Query: 124 VSWNVMISGYVRNKSLSAARNLF------EMMP--------------------------- 150
VSW VMISGY R ++ A ++F ++P
Sbjct: 190 VSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVL 249
Query: 151 ------KRDVVSWNTMLSGYAQN-GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+RDVV +L+ Y+++ D A + F+ M+E+NE +W+ ++AA GRI+
Sbjct: 250 ALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
A ++E + +L+ G + R+ DA+ +F+++P VSWN +ITGY QN +
Sbjct: 310 AIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMV 369
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK---------------- 307
EA+ LF++ P ++ +W M++GY QNG+ +EA + +
Sbjct: 370 NEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC 429
Query: 308 -----------------------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
N+ + NA+I Y + + M+ AR++F M K++ SWN
Sbjct: 430 SNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWN 489
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+ + Q+ + ARN FD M D +SW II+ YA + S +++ F M E
Sbjct: 490 SFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELP 549
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N T +L C +L + ++G+Q+H +K+G ++ V NAL+ MY KCG + + F
Sbjct: 550 NSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIF 608
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + ++D+ +WNT+I GYA+HG G++A+ +++ M++ G+ P+++T VG+L+ACSH GLV+
Sbjct: 609 DLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVD 668
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G ++F SM++DYG+ P +HY CMVDLLGR G + A+ + +MP EPD W ALLGA
Sbjct: 669 EGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+++ E+ ++AAE +F +EP NAG YV+LSN+Y++ G WG+V++VR M+ +GV K
Sbjct: 729 CKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEP 788
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW ++++K+H+F GD H + + I A LEEL LK G+V T+ VLHD+ EE+KE
Sbjct: 789 GCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKE 848
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L YHSEKLAVAY +L+ P G PI+++KNLR+C DCH IK +S + R I +RD NRF
Sbjct: 849 SSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRF 908
Query: 765 HHFSGGSCSCGDYW 778
HHF GSCSC D+W
Sbjct: 909 HHFRNGSCSCEDFW 922
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 281/541 (51%), Gaps = 45/541 (8%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G+ ++ + I R G A VF++MPRR +++N+MIS Y NG D AR ++D
Sbjct: 30 GELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYD 89
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+ ++ + +++SGY R + AR +F+ M +R+ V+WN M+S Y QNG ARR+
Sbjct: 90 AISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL 149
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
FD M ++ SWN +L Y + ++ +A LFE +VSW ++ G+ + + G A
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 237 WIFDRMP---------------------------------------VRDEVSWNTMITGY 257
IF +M RD V ++ Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 258 AQN-NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
+++ + L A + FE ++ +TW+ M++ G++D A +++ P K+ A+I
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
G Q R+D AR LFE + V SWN +ITGY Q+G + A+ LFD+MP + ISWA
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+IAGYAQ+G SE++L L E+ R G + S TS+ C+N+ +LE G Q+H VKVG
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ F NAL+ MY KC ++E A F +V KD++SWN+ +A ++ +A F+
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFD 509
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
+M + DD++ I+SA +H + F +M ++ +PNS T ++ + G
Sbjct: 510 NM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE-LPNSPILTILLGVCGSL 564
Query: 557 G 557
G
Sbjct: 565 G 565
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 217/391 (55%), Gaps = 20/391 (5%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
R+G+A+ +FD MP RD ++WN+MI+ Y N A+ L++ ++ T ++SGY +
Sbjct: 49 RVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGR 108
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
G+V EAR +FD M E+NTV+WNAMI+ YVQ + MAR LF+AM ++V+SWN+M+TGY
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY 168
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
S ++ ARNLF++MP+ + +SW +I+GY + + +F +M R G ++S F
Sbjct: 169 CHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFA 228
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV-EEAYHAFEEIVD 469
S LS L +L++ + L +K GFE +G A+L +Y + SV + A FE +++
Sbjct: 229 SALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIE 288
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFE--SMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
++ +W+TMIA + G A+ ++E +K++ + +++ + G ++
Sbjct: 289 RNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACR------TALITGLAQCGRIDDAR 342
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
F + P + ++ + G ++EA+ L MPF + +W ++
Sbjct: 343 ILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAG--- 393
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
Y + +E+A ++ E+ +GM LS+L
Sbjct: 394 YAQNGRSEEALGLLQEL--HRSGMLPSLSSL 422
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 296/794 (37%), Positives = 468/794 (58%), Gaps = 80/794 (10%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN I+ +++NG A +F++MP R S+N+M++GY + Q+ AR +F++MP+R+L
Sbjct: 130 WNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNL 189
Query: 124 VSWNVMISGYVRNKSLSAARNLF------EMMP--------------------------- 150
VSW VMISGY R ++ A ++F ++P
Sbjct: 190 VSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVL 249
Query: 151 ------KRDVVSWNTMLSGYAQN-GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+RDVV +L+ Y+++ D A + F+ M+E+NE +W+ ++AA GRI+
Sbjct: 250 ALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
A ++E + +L+ G + R+ DA+ +F+++P VSWN +ITGY QN +
Sbjct: 310 AIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMV 369
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK---------------- 307
EA+ LF++ P ++ +W M++GY QNG+ +EA + +
Sbjct: 370 NEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC 429
Query: 308 -----------------------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
N+ + NA+I Y + + M+ AR++F M K++ SWN
Sbjct: 430 SNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWN 489
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+ + Q+ + ARN FD M D +SW II+ YA + S +++ F M E
Sbjct: 490 SFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELP 549
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N T +L C +L + ++G+Q+H +K+G ++ V NAL+ MY KCG + + F
Sbjct: 550 NSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIF 608
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + ++D+ +WNT+I GYA+HG G++A+ +++ M++ G+ P+++T VG+L+ACSH GLV+
Sbjct: 609 DLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVD 668
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G ++F SM++DYG+ P +HY CMVDLLGR G + A+ + +MP EPD W ALLGA
Sbjct: 669 EGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+++ E+ ++AAE +F +EP NAG YV+LSN+Y++ G WG+V++VR M+ +GV K
Sbjct: 729 CKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEP 788
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW ++++K+H+F GD H + + I A LEEL LK G+V T+ VLHD+ EE+KE
Sbjct: 789 GCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKE 848
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L YHSEKLAVAY +L+ P G PI+++KNLR+C DCH IK +S + R I +RD NRF
Sbjct: 849 SSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRF 908
Query: 765 HHFSGGSCSCGDYW 778
HHF GSCSC D+W
Sbjct: 909 HHFRNGSCSCEDFW 922
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 281/541 (51%), Gaps = 45/541 (8%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G+ ++ + I R G A VF++MPRR +++N+MIS Y NG D AR ++D
Sbjct: 30 GELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYD 89
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+ ++ + +++SGY R + AR +F+ M +R+ V+WN M+S Y QNG ARR+
Sbjct: 90 AISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL 149
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
FD M ++ SWN +L Y + ++ +A LFE +VSW ++ G+ + + G A
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 237 WIFDRMP---------------------------------------VRDEVSWNTMITGY 257
IF +M RD V ++ Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 258 AQN-NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
+++ + L A + FE ++ +TW+ M++ G++D A +++ P K+ A+I
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
G Q R+D AR LFE + V SWN +ITGY Q+G + A+ LFD+MP + ISWA
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+IAGYAQ+G SE++L L E+ R G + S TS+ C+N+ +LE G Q+H VKVG
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ F NAL+ MY KC ++E A F +V KD++SWN+ +A ++ +A F+
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFD 509
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
+M + DD++ I+SA +H + F +M ++ +PNS T ++ + G
Sbjct: 510 NM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE-LPNSPILTILLGVCGSL 564
Query: 557 G 557
G
Sbjct: 565 G 565
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 217/391 (55%), Gaps = 20/391 (5%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
R+G+A+ +FD MP RD ++WN+MI+ Y N A+ L++ ++ T ++SGY +
Sbjct: 49 RVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGR 108
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
G+V EAR +FD M E+NTV+WNAMI+ YVQ + MAR LF+AM ++V+SWN+M+TGY
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY 168
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
S ++ ARNLF++MP+ + +SW +I+GY + + +F +M R G ++S F
Sbjct: 169 CHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFA 228
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV-EEAYHAFEEIVD 469
S LS L +L++ + L +K GFE +G A+L +Y + SV + A FE +++
Sbjct: 229 SALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIE 288
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFE--SMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
++ +W+TMIA + G A+ ++E +K++ + +++ + G ++
Sbjct: 289 RNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACR------TALITGLAQCGRIDDAR 342
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
F + P + ++ + G ++EA+ L MPF + +W ++
Sbjct: 343 ILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAG--- 393
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
Y + +E+A ++ E+ +GM LS+L
Sbjct: 394 YAQNGRSEEALGLLQEL--HRSGMLPSLSSL 422
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 300/790 (37%), Positives = 462/790 (58%), Gaps = 80/790 (10%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN +T +++NG A +F++MP R S+N M++GY + ++ AR +F++MP+R+
Sbjct: 129 WNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNG 188
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMM------------------------P--------- 150
VSW VMISGYV + A ++F M P
Sbjct: 189 VSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVL 248
Query: 151 ------KRDVVSWNTMLSGYAQN-GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+RDVV +L+GY ++ D+A + F+ M +NE +W+ ++AA Q GRI++
Sbjct: 249 VHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDD 308
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
A +++ V S S++ G + R+ DAK +FD++ + VSWN MITGY QN +
Sbjct: 309 AFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMV 368
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK---------------- 307
EA+ LF P ++ +W M++GY +NG+ ++A + A+ K
Sbjct: 369 DEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFAC 428
Query: 308 -----------------------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
N+ NA+I Y + + + R++F+ MT K+ S+N
Sbjct: 429 SNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYN 488
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+ ++ Q+ AR++F+ MP D +SW II+ AQ+ +++ +F M E
Sbjct: 489 SFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELP 548
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N T +L NL + +LG+Q+H +K+G ++G V NAL+ MY KC S + + F
Sbjct: 549 NPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVF 607
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + ++D+ +WNT+I GYA+HG G++A+ +++ M + G+ P+++T VG+L ACSH+GLV+
Sbjct: 608 DSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVD 667
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G ++F SM+ DYG+ P +HY CMVDLLGRAG + A++ + +MP EPD+ W ALLGA
Sbjct: 668 EGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGA 727
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+++ E+ +AAE +F +EP NAG YV+LSN+Y++ G W +V+KVR M++RGV K
Sbjct: 728 CKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDP 787
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW++++NK+H+F GD H + IYA L EL LK G+V T VLHD+ EE+KE
Sbjct: 788 GCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKE 847
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L YHSEKLAVAYG+L P G PI++MKNLR+C DCH IK +S + R I +RD NRF
Sbjct: 848 SSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRF 907
Query: 765 HHFSGGSCSC 774
HHF GSCSC
Sbjct: 908 HHFRNGSCSC 917
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 265/533 (49%), Gaps = 45/533 (8%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
R G A VF+SMP R +++N+MI Y NG D R + D + +L + +++SG
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
Y R + AR +F+ M R+ V+WN M++ Y QNG AR++FD M ++ SWN +L
Sbjct: 105 YARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTML 164
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-------- 244
Y + +EEA LFE VSW ++ G+V ++ G A +F M
Sbjct: 165 TGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQP 224
Query: 245 -------------------------------RDEVSWNTMITGYAQN-NYLAEAQRLFEE 272
RD V ++ GY ++ N L A + FE
Sbjct: 225 NLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEG 284
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
++ +TW+ +++ Q G++D+A ++ P K+ S +M+ G + R+D A+ LF
Sbjct: 285 MAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILF 344
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+ + NV SWN MITGY Q+ + A +LF+RMP + ISWA +IAGYA++G SE +L
Sbjct: 345 DQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALV 404
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
+ R G + S TS C+N+ +LE GKQ+H VK G + +V NAL+ +Y
Sbjct: 405 SLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYG 464
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
K S+ F+ + KD +S+N+ ++ ++ +A +F +M + PD ++
Sbjct: 465 KYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS----PDVVSWTT 520
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
I+SAC+ + E F SM + +PN T ++ L G G Q +
Sbjct: 521 IISACAQADQGNEAVEIFRSMLHERE-LPNPPILTILLGLSGNLGAPQLGQQI 572
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 197/370 (53%), Gaps = 21/370 (5%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
RL +A+ +FD MP RD ++WN+MI Y N + L + ++ T T ++SGY +
Sbjct: 48 RLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYAR 107
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
G+V +AR +FD M +NTV+WNAM+ YVQ + +AR+LF+AM ++V+SWNTM+TGY
Sbjct: 108 AGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGY 167
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYA---QSGYSEDSLRLFIEMKRYGERLNRS 407
S + ARNLF+RMP+ + +SW +I+GY Q G + D R + E+ N
Sbjct: 168 CHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPN-- 225
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK-CGSVEEAYHAFEE 466
SVLS +L + + +H + K GFE VG A+L Y K ++ A FE
Sbjct: 226 -LVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEG 284
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFE--SMKTVGIKPDDITMVGILSACSHTGLVE 524
+ ++ +W+T+IA ++ G DA +++ +K+V P +M L+ + G ++
Sbjct: 285 MAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV---PSRTSM---LTGLARYGRID 338
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
F ++ PN + M+ + +DEA++L MPF + +W ++
Sbjct: 339 DAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-NTISWAGMIAG 392
Query: 585 CRLYGKTELA 594
G++E A
Sbjct: 393 YARNGRSEQA 402
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 232/533 (43%), Gaps = 92/533 (17%)
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV 227
G AR +FD M ++ I+WN ++ AY NG + L ++ + + + L+ G+
Sbjct: 47 GRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYA 106
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
+ R+ DA+ +FD M VR+ V+WN M+T Y QN + A++LF+ P +DV +W M++G
Sbjct: 107 RAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTG 166
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC---------- 337
Y + ++EAR +F+ MPE+N VSW MI+GYV ++ A ++F M C
Sbjct: 167 YCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNL 226
Query: 338 -----------------------------KNVASWNTMITGYAQS-GEITHARNLFDRMP 367
++V ++ GY + + A F+ M
Sbjct: 227 VSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMA 286
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF------TSVLSTCANLAS 421
+ +W+ IIA +Q+G +D+ ++ R P TS+L+ A
Sbjct: 287 ARNEYTWSTIIAALSQAGRIDDAFAVY----------QRDPLKSVPSRTSMLTGLARYGR 336
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
++ K L Q+ E NA++ Y + V+EA F + ++ ISW MIAG
Sbjct: 337 IDDAKILFDQI----HEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAG 392
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY------------ 529
YAR+G + AL+ +++ G+ P ++ ACS+ +E G +
Sbjct: 393 YARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFN 452
Query: 530 ---------FYSMNRDYG---------VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
Y R G + ++ Y + L + DEA+++ NMP
Sbjct: 453 SYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP- 511
Query: 572 EPDAATWGALLGACRLYGK-TELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
PD +W ++ AC + E E ++ E E N + +L L G
Sbjct: 512 SPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLG 564
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 149/329 (45%), Gaps = 46/329 (13%)
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
T + +A I + R+ ARE+F++M +++ +WN+MI Y +G R+L D +
Sbjct: 33 TSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISG 92
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ + +++GYA++G D+ R+F M G R N + ++++ + L ++L
Sbjct: 93 GNLRTGTILLSGYARAGRVRDARRVFDGM---GVR-NTVAWNAMVTCYVQNGDITLARKL 148
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA---RH 485
+ + N +L YC +EEA + FE + +++ +SW MI+GY +H
Sbjct: 149 FDAMPSRDVSS----WNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQH 204
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG----------LVEK---------G 526
G D +F +M G+ P+ +V +LSA H G LV K G
Sbjct: 205 GRAWD---MFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVG 261
Query: 527 TEYFYSMNRDYGVIP------------NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
T +D ++ N ++ ++ L +AGR+D+A + + P +
Sbjct: 262 TAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV 321
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFE 603
+ L G R YG+ + A+ + I E
Sbjct: 322 PSRTSMLTGLAR-YGRIDDAKILFDQIHE 349
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/667 (43%), Positives = 420/667 (62%), Gaps = 7/667 (1%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V NA I+ G ++ AR F+ MP R S+N +++GY RN AA +F MP R
Sbjct: 18 VDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTR 77
Query: 153 DVVSWNTMLSGYA--QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
D+ S+N ++SG + ++ DAA + + +S+ LL YV++G + +A LF
Sbjct: 78 DLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQ 137
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+S+ L+GGF+ R+ +A+ +FD MP +D V+W M++GY Q + EA+ LF
Sbjct: 138 MPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLF 197
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+E P ++V +WTAMVSGY QNG+V+ AR +F+ MPE+N VSW AM+ GY+Q R++ A E
Sbjct: 198 DEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEE 257
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
LF AM +A+ N MI G+ Q G + A+++FDRM + D +W+AII Y Q+ + ++
Sbjct: 258 LFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEA 317
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L F EM G R N S+L+ CA LA L+ G+++HG +++ F+ + +AL+ M
Sbjct: 318 LSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITM 377
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG++++A F KDV+ WN+MI GYA+HG G++AL +F+ M+ G+ PD IT
Sbjct: 378 YIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITY 437
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+G L+ACS+TG V++G + F SM G+ P +HY CMVDLLGRAG +DEA L+K MP
Sbjct: 438 IGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMP 497
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
EPDA WGAL+GACR++ E+AE +A+ + E+EP NAG YVLLS++Y +SGRW D S
Sbjct: 498 VEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEPGNAGPYVLLSHIYTSSGRWEDASN 557
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVY 689
+R + R + K G SW+E +VH F GD L H E I LE+L+ L + G+
Sbjct: 558 MRKFISSRHLNKSLGCSWIEYDKRVHLFKSGDVLAHQEHASILKMLEKLDGLLMESGYSA 617
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
VLHD+ +E+K H LRYHSE+ AVAYG+L IP PIRVMKNLRVC I ++
Sbjct: 618 DGSFVLHDIDDEQKTHSLRYHSERQAVAYGLLKIPEELPIRVMKNLRVC----GTIGEVN 673
Query: 750 KIVGRLI 756
+V L+
Sbjct: 674 AVVNSLL 680
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 237/476 (49%), Gaps = 60/476 (12%)
Query: 30 ANTNPYPSKKTLKRHLNSKSRNK----PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFN 85
A+ N S +L+RH + P P + + + ++R+G A+ +F
Sbjct: 80 ASYNALISGLSLRRHTLPDAAAALATIPYPP---SVVSFTSLLRGYVRHGLLADAIQLFR 136
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNL 145
MP R+ +SY ++ G+L G++D AR++FD+MP +D+V+W M+SGY + + AR L
Sbjct: 137 QMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTL 196
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
F+ MPKR+VVSW M+SGYAQNG + AR++F+ M E+NE+SW +L Y+Q GRIE+A
Sbjct: 197 FDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAE 256
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
LF + + + + N ++ GF +Q + AK +FDRM RD+ +W+ +I Y QN +L E
Sbjct: 257 ELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLME 316
Query: 266 AQRLFEE----------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVS 311
A F E V + T A ++ +D R + AM + + +
Sbjct: 317 ALSTFREMLHIGIRPNYPSVISILTVCAALA------VLDYGREVHGAMLRRSFDMDIYA 370
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+A+I Y++ +D A+ +F K+V WN+MITGYAQ G A ++FD M
Sbjct: 371 VSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMR---- 426
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+AG G + + L+ C+ ++ G+ +
Sbjct: 427 ------LAGMVPDGIT---------------------YIGALTACSYTGKVKEGRDIFNS 459
Query: 432 L-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ K G + G ++ + + G V+EA + + + V+ D + W ++ H
Sbjct: 460 MRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMH 515
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 201/422 (47%), Gaps = 41/422 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ W ++ + +NG + A +F MP R+ VS+ AM+ GY+ G+++ A ++F+ MP
Sbjct: 204 NVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEELFNAMP 263
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
L + N MI G+ + + AA+++F+ M +RD +W+ ++ Y QN + A F
Sbjct: 264 DHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTFRE 323
Query: 180 MLE----KNEISWNGLLA-----AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
ML N S +L A + GR ML S + ++ + ++L+ ++K
Sbjct: 324 MLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRS-FDMDIYAVSALITMYIKCG 382
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVS 286
L AK +F +D V WN+MITGYAQ+ EA +F++ V D T+ ++
Sbjct: 383 NLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALT 442
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NV 340
GKV E R IF++M K+ + + M+ + +D A L + M + +
Sbjct: 443 ACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDA 502
Query: 341 ASWNTMITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS--LRL 393
W ++ A+ EI+ A+ L + P + + + Y SG ED+ +R
Sbjct: 503 VIWGALMGACRMHKNAEIAEIS-AKKLLELEPG-NAGPYVLLSHIYTSSGRWEDASNMRK 560
Query: 394 FIEMK-----------RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-GC 441
FI + Y +R++ VL+ + + L++ ++L G L++ G+ A G
Sbjct: 561 FISSRHLNKSLGCSWIEYDKRVHLFKSGDVLAHQEHASILKMLEKLDGLLMESGYSADGS 620
Query: 442 FV 443
FV
Sbjct: 621 FV 622
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 283/596 (47%), Positives = 391/596 (65%), Gaps = 1/596 (0%)
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK-RLGDAKWIFDRM 242
N I+ N L+A+YV+ G I+ A +FE V+WNS++ F K+ A+ +F+++
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
P + VS+N M+ + + + +A+ F+ P+KDV +W M+S Q G + EAR +F
Sbjct: 100 PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFS 159
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
AMPEKN VSW+AM++GYV +D A E F A ++V +W MITGY + G + A L
Sbjct: 160 AMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERL 219
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F M ++W A+IAGY ++G +ED LRLF M G + N TSVL C+NL++L
Sbjct: 220 FQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSAL 279
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LGKQ+H + K + G +L+ MY KCG +++A+ F +I KDV+ WN MI+GY
Sbjct: 280 QLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGY 339
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A+HG GK AL LF+ MK G+KPD IT V +L AC+H GLV+ G +YF +M RD+G+
Sbjct: 340 AQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETK 399
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVDLLGRAG+L EA +L+K+MPF+P A +G LLGACR++ LAE AA+ +
Sbjct: 400 PEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLL 459
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E++P A YV L+N+YAA RW V+ +R M+D V K+ GYSW+E+ + VH F D
Sbjct: 460 ELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSD 519
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
LHPE I+ L++LE K+K G+V + VLHDVGEE KE +L +HSEKLA+A+G+L
Sbjct: 520 RLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLK 579
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+P G PIRV KNLRVC DCH+A K+IS I GR II+RD RFHHF G CSC DYW
Sbjct: 580 VPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 198/356 (55%), Gaps = 14/356 (3%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS-LS 140
H FN+ + ++ N +I+ Y+ G +D A +VF+ M + V+WN +++ + +
Sbjct: 34 HEFNN---NNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFE 90
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
AR LFE +P+ + VS+N ML+ + + AR FD M K+ SWN +++A Q G
Sbjct: 91 YARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGL 150
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ EA LF + VSW++++ G+V L A F P+R ++W MITGY +
Sbjct: 151 MGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKF 210
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMI 316
+ A+RLF+E ++ + TW AM++GYV+NG+ ++ +F M E N +S +++
Sbjct: 211 GRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVL 270
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNT-----MITGYAQSGEITHARNLFDRMPQHDC 371
G + + +++ + + CK S +T +++ Y++ G++ A LF ++P+ D
Sbjct: 271 LGCSNLSALQLGKQVHQ-LVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDV 329
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ W A+I+GYAQ G + +LRLF EMK+ G + + F +VL C + ++LG Q
Sbjct: 330 VCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-GQLDPARQVFDQMPQRDL 123
N I +++R G DSA+ VF M +S+V++N++++ + G + ARQ+F+++PQ +
Sbjct: 45 NKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQPNT 104
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
VS+N+M++ + + + AR F+ MP +DV SWNTM+S AQ G ARR+F M EK
Sbjct: 105 VSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEK 164
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
N +SW+ +++ YV G ++ A F + V++W +++ G++K R+ A+ +F M
Sbjct: 165 NCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMS 224
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFE---EAPVK-DVFTWTAMVSG-----YVQNGKV 294
+R V+WN MI GY +N + RLF E VK + + T+++ G +Q GK
Sbjct: 225 MRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGK- 283
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
+++ +T + ++++ Y + + A ELF + K+V WN MI+GYAQ G
Sbjct: 284 QVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHG 343
Query: 355 EITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
A LFD M + D I++ A++ +G + ++ F M+R
Sbjct: 344 AGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRR 392
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 163/332 (49%), Gaps = 21/332 (6%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P+P + +N+ + H + A F+SMP + S+N MIS G + AR
Sbjct: 100 PQP----NTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEAR 155
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
++F MP+++ VSW+ M+SGYV L AA F P R V++W M++GY + G +
Sbjct: 156 RLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVEL 215
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVK 228
A R+F M + ++WN ++A YV+NGR E+ LF E+ +S S++ G
Sbjct: 216 AERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSN 275
Query: 229 QKRLGDAKWIFD---RMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
L K + + P+ D + ++++ Y++ L +A LF + P KDV W AM
Sbjct: 276 LSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAM 335
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAM----- 335
+SGY Q+G +A +FD M ++ +++ A++ +D+ + F M
Sbjct: 336 ISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFG 395
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ M+ ++G+++ A +L MP
Sbjct: 396 IETKPEHYACMVDLLGRAGKLSEAVDLIKSMP 427
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 273/568 (48%), Positives = 380/568 (66%), Gaps = 14/568 (2%)
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
M G+ + KR +A+ +FD+MP + +SWN +++GY QN ++EA+++F++ P ++V +WT
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
AM+ GYVQ G ++EA ++F MPE+N VSW M+ G ++ R+D AR+LF+ M K+V +
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVA 120
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG-------------YAQSGYSED 389
MI G G + AR +FD MPQ + ++W ++I+G Y + G+ +
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELE 180
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L LF M+R G R + SVLS C +LASL+ G+Q+H QLV+ F+ +V + L+
Sbjct: 181 ALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLIT 240
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCG + A F+ KD++ WN++IAGYA+HGFG+ AL +F M + I PD+IT
Sbjct: 241 MYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEIT 300
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+G+LSACS+TG V++G E F SM Y V P ++HY CMVDLLGRAG+L+EA NL++NM
Sbjct: 301 FIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENM 360
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
P E DA WGALLGACR + +LAE AA+ + ++EP NAG Y+LLSNLY++ RW DV
Sbjct: 361 PVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVV 420
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFS-VGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++R MR + ++K G SW+EV KVH FS G T HPE + I L +L L++ G+
Sbjct: 421 ELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYC 480
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
V+HDV EEEK H LR HSEKLAVAYG+L +P G PIRVMKNLRVC D H+ IK I
Sbjct: 481 PDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLI 540
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGD 776
+++ GR IILRD NRFHHF G CSC D
Sbjct: 541 AQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 194/381 (50%), Gaps = 27/381 (7%)
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
++GY +NK AR LF+ MP+ + +SWN ++SGY QNG AR++FD+M E+N +SW
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
++ YVQ G IEEA +LF VVSW ++GG ++ R+ +A+ +FD MPV+D V+
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVA 120
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG-------------YVQNGKVDE 296
MI G L EA+ +F+E P ++V WT+M+SG Y + G E
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELE 180
Query: 297 ARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTM 346
A +F M P +V + G + + +D R++ + ++ + +
Sbjct: 181 ALALFSLMQREGVRPSFPSVISVLSVCGSLAS--LDHGRQVHSQLVRSQFDIDIYVSSVL 238
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
IT Y + G++ A+ +FDR D + W +IIAGYAQ G+ E +L +F +M +
Sbjct: 239 ITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDE 298
Query: 407 SPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
F VLS C+ ++ G ++ + K + ++ + + G + EA + E
Sbjct: 299 ITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIE 358
Query: 466 EI-VDKDVISWNTMIAGYARH 485
+ V+ D I W ++ H
Sbjct: 359 NMPVEADAIVWGALLGACRTH 379
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 34/333 (10%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A +F+ MP +++S+N ++SGY+ NG + AR+VFD+MP+R++VSW MI GYV+ +
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
A LF MP+R+VVSW ML G ++G D AR++FD M K+ ++ ++ G
Sbjct: 73 EEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEG 132
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
R+ EA +F+ VV+W S++ G +D+ +W+TMI Y +
Sbjct: 133 RLIEAREIFDEMPQRNVVAWTSMISG------------------EKDDGTWSTMIKIYER 174
Query: 260 NNYLAEAQRLF---EEAPVKDVF-TWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVS 311
+ EA LF + V+ F + +++S +D R + + +
Sbjct: 175 KGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYV 234
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG------EITHARNLFDR 365
+ +I Y++ + A+ +F+ + K++ WN++I GYAQ G E+ H ++F
Sbjct: 235 SSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH--DMFSS 292
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
D I++ +++ + +G ++ L +F MK
Sbjct: 293 SIAPDEITFIGVLSACSYTGKVKEGLEIFESMK 325
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 172/349 (49%), Gaps = 33/349 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ +++NG A VF+ MP R+ VS+ AMI GY+ G ++ A +F +MP+R++
Sbjct: 28 WNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNV 87
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
VSW VM+ G + + + AR LF+MMP +DVV+ M+ G G AR IFD M ++
Sbjct: 88 VSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQR 147
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMG------------------ 224
N ++W +++ +G ++E K E ++ SLM
Sbjct: 148 NVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVC 207
Query: 225 ---GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
+ R ++ + + + VS + +IT Y + L A+R+F+ KD+ W
Sbjct: 208 GSLASLDHGRQVHSQLVRSQFDIDIYVS-SVLITMYIKCGDLVTAKRVFDRFSSKDIVMW 266
Query: 282 TAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
++++GY Q+G ++A +F M + +++ +++ T ++ E+FE+M
Sbjct: 267 NSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKS 326
Query: 338 K-----NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
K + M+ ++G++ A NL + MP + D I W A++
Sbjct: 327 KYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGA 375
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 125/241 (51%), Gaps = 22/241 (9%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS-SVSYNAMISGYLLNG---QLDPA 111
+G+ D W+ I + R G AL +F+ M R S+ ++IS + G LD
Sbjct: 157 SGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHG 216
Query: 112 RQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
RQV Q+ + D+ +V+I+ Y++ L A+ +F+ +D+V WN++++GYAQ+
Sbjct: 217 RQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQH 276
Query: 168 GYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVS---- 218
G+ + A +F M + +EI++ G+L+A G+++E +FES K+ ++V
Sbjct: 277 GFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEH 336
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEA 273
+ ++ + +L +A + + MPV D + W ++ +N LAE A++L +
Sbjct: 337 YACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLE 396
Query: 274 P 274
P
Sbjct: 397 P 397
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 284/729 (38%), Positives = 447/729 (61%), Gaps = 26/729 (3%)
Query: 76 CCDS-------ALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
CC++ LH + S+ + YN +I+ Y G + AR VFD+MPQ + SW
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N M+S Y ++ LS + +F +MP RD VSWN+++SGY G A + ++ M++ +
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSW---------NSLMGGFVKQKRLGDAKW 237
+ N + + + + C+ + + ++V + +SL+ + K + A
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+FD + R+ V +NTMITG ++ + +++RLF +D +WT M++G +QNG EA
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 298 RMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITG 349
+F M ++ + ++ +++ + + +E+ + NV + ++
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + + +A +F RM + +SW A++ GY Q+G+SE+++R+F +M+R G +
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTL 374
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
SV+S+CANLASLE G Q H Q + G + V NAL+ +Y KCGS+E++ F+E+
Sbjct: 375 GSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSF 434
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+D +SW +++GYA+ G + + LFE M G+KPD +T + +LSACS GLVE+G +Y
Sbjct: 435 RDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQY 494
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F SM +D+G+IP S HYTCM+DL GRAGRL+EA+N + MPF PD+ W LL +CRLYG
Sbjct: 495 FESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
E+ + AAE + E++P+N Y+LLS++YAA G+W +V+++R MR++G +K G+SW+
Sbjct: 555 NEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWI 614
Query: 650 EVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY 709
+ ++KV+ FS D P D+IYA LE+L K+ ++G+V VLHDV + EK ML +
Sbjct: 615 KYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNH 674
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSEKLA+A+G+L IP G PIRV+KNLRVC DCHNA K+ISKI R I++RD RFH F
Sbjct: 675 HSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKD 734
Query: 770 GSCSCGDYW 778
G+CSCGD+W
Sbjct: 735 GTCSCGDFW 743
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 227/512 (44%), Gaps = 89/512 (17%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+N I + + G A HVF+ MP+ +S S+N M+S Y +G L +++F MP RD
Sbjct: 43 YNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDG 102
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDV-----VSWNTMLSGYAQNGYADAARRIFD 178
VSWN +ISGYV S+ A + M K V ++++TML + G D R+I
Sbjct: 103 VSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHG 162
Query: 179 RMLEKNEISW----NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
++++ ++ + L+ Y + G + A +F+ VV +N+++ G ++ + D
Sbjct: 163 QIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKD 222
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKD------------- 277
+K +F M RD +SW TMITG QN AEA LF +E D
Sbjct: 223 SKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGG 282
Query: 278 ----------------------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
VF +A+V Y + V A +F M KN VSW AM
Sbjct: 283 LRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAM 342
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCKNVASW--------------- 343
+ GY Q + A +F M +C N+AS
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGL 402
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
N +IT Y + G I + LFD M D +SW A+++GYAQ G + +++ LF
Sbjct: 403 ISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFER 462
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCG 455
M G + + F +VLS C+ +E G+Q ++K G ++ ++ + G
Sbjct: 463 MLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAG 522
Query: 456 SVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+EEA + ++ D I W T+++ +G
Sbjct: 523 RLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 158/372 (42%), Gaps = 78/372 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ +N IT +R+G + +F+ M R S+S+ MI+G + NG A +F M
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
Q ++ + ++ Y + +S+
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVR 322
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A +F+ M ++VVSW ML GY QNG+++ A R+F M +E ++ + ++++
Sbjct: 323 YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382
Query: 197 QNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+EE C S + N+L+ + K + D+ +FD M RDEVSW
Sbjct: 383 NLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTA 442
Query: 253 MITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+++GYAQ E LFE V+ D T+ A++S + G V+ + F++M + +
Sbjct: 443 LVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDH 502
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP- 367
+ + TC MI + ++G + A+N ++MP
Sbjct: 503 GII------------------PFSDHYTC--------MIDLFGRAGRLEEAKNFINKMPF 536
Query: 368 QHDCISWAAIIA 379
D I WA +++
Sbjct: 537 SPDSIGWATLLS 548
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 285/677 (42%), Positives = 416/677 (61%), Gaps = 63/677 (9%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I+ +NG A +F+ MP+R+ VS+N+MI+ YL N +++ ARQ+FD+MP RDL
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLY 109
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
SW +MI+ Y RN L+ ARNLF ++P K + V N M++GYA+N D ARR+FD M K
Sbjct: 110 SWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK 169
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV---------------- 227
+ +SWN +L Y +NG + FE A +VVSWN ++ GFV
Sbjct: 170 DLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP 229
Query: 228 ---------------KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ ++ +A+ +FD+MP+R+ V+WN MI Y QN ++ EA LF E
Sbjct: 230 NPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFME 289
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
P K+ +WT +++GYV+ GK+DEAR + + MP +N + AMI+GYVQ KRMD AR++F
Sbjct: 290 MPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIF 349
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
++ ++V WNTMI GY+Q G + A +LF +M + D +SW ++A YAQ G + +++
Sbjct: 350 NQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIK 409
Query: 393 LFIEMKRY-------------------------------GERLNRSPFTSVLSTCANLAS 421
+F EMK G++ ++S F LS+CA+LA+
Sbjct: 410 IFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAA 469
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L++GKQLH ++K G+ FV NAL+ MY KCGS+ A F++I DV+SWN++IA
Sbjct: 470 LQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAA 529
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA +G G++AL LF M+ G+ PD++T VGILSACSH GL+++G + F M + Y + P
Sbjct: 530 YALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEP 589
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
++HY CMVDLLGRAGRL+EA L++ M +A WGALLGACR++G ELA+ AAE +
Sbjct: 590 LAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKL 649
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
E EP YVLLSN+ A +GRW +V++VR M+++G +K G+SW+E+QN+VH F
Sbjct: 650 LEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSE 709
Query: 662 DTLHPEKDRIYAYLEEL 678
D HP + L L
Sbjct: 710 DPAHPRAVELCHILRSL 726
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/551 (30%), Positives = 289/551 (52%), Gaps = 57/551 (10%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+N I+ +GQ+D A +VF M ++ V+ N MIS + +N +S AR LF+ MP+R++
Sbjct: 18 HNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI 77
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-SKAN 213
VSWN+M++ Y N + AR++FD+M ++ SW ++ Y +NG + +A LF
Sbjct: 78 VSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYK 137
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
W V N+++ G+ K ++ +A+ +FD MP +D VSWN+M+TGY +N + + FEE
Sbjct: 138 WNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEM 197
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
+DV +W MV G+V+ G ++ + F+ +P NTVSW M+ G+ + ++ AR LF+
Sbjct: 198 AERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFD 257
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
M +NV +WN MI Y Q+ + A +LF MP+ + ISW +I GY + G +++ +L
Sbjct: 258 QMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQL 317
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLAS------LELGKQLHGQLVKVGFEAGCFVGNAL 447
LN+ P+ +V + A ++ ++ +Q+ Q+ + C+ N +
Sbjct: 318 ----------LNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIR--DVVCW--NTM 363
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI---- 503
+ Y +CG ++EA H F+++V KD++SWNTM+A YA+ G A+ +FE MK I
Sbjct: 364 IAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWN 423
Query: 504 ---------------------------KPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
KPD T LS+C+H ++ G + + +
Sbjct: 424 SLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQ-LHQLVMK 482
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
G + ++ + + G + A+ L K++ D +W +L+ A L G +
Sbjct: 483 SGYATDLFVSNALITMYAKCGSISSAELLFKDID-HFDVVSWNSLIAAYALNGN---GRE 538
Query: 597 AAEVIFEMEPE 607
A ++ +ME E
Sbjct: 539 ALKLFHKMEVE 549
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 167/377 (44%), Gaps = 51/377 (13%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
VF ++ ++G++DEA +F M KNTV+ N+MI+ + + R+ AR+LF+ M
Sbjct: 15 VFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N+ SWN+MI Y + + AR LFD+MP D SW +I Y ++G + LF
Sbjct: 75 RNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLF--- 131
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
N P+ C NA++ Y K
Sbjct: 132 -------NLLPYKWNPVCC----------------------------NAMVAGYAKNRQF 156
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+EA F+ + KD++SWN+M+ GY R+G + L FE M + ++ + G +
Sbjct: 157 DEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFV--- 213
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
G + E+F + PN+ + M+ R G++ EA+ L MP +
Sbjct: 214 -EVGDLNSSWEFFEKIPN-----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIR-NVVA 266
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
W A++ A Y + ++A + EM +N+ + + N Y G+ + ++ +M
Sbjct: 267 WNAMIAA---YVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPY 323
Query: 638 RGVKKVTGYSWLEVQNK 654
R V T VQNK
Sbjct: 324 RNVAAQTAMISGYVQNK 340
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/715 (39%), Positives = 441/715 (61%), Gaps = 18/715 (2%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ ++P + N +IS Y G + A +VFDQMP +L SWN ++S Y + +S
Sbjct: 34 HIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSE 93
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK------NEISWNGLLAAY 195
LF+ MP+RD VSWN+++SGYA G + + ++ ML+ N I+++ LL
Sbjct: 94 MEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILA 153
Query: 196 VQNGRIEEACMLFESKANWEVVSW----NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
+ G ++ + + +S+ + L+ + K + A+ +FD +P ++ V +N
Sbjct: 154 SKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYN 213
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN--- 308
T+I G + + +++RLF E +D +WT+M++G+ QNG +A IF M +N
Sbjct: 214 TLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQM 273
Query: 309 -TVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLF 363
++ +++ + +++ + N+ + ++ Y + I A +F
Sbjct: 274 DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVF 333
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
+M + +SW A++ GY Q+GYSE++++ F +M++YG + SV+S+CANLASLE
Sbjct: 334 KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 393
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G Q H + + G + V NAL+ +Y KCGS+E+++ F EI KD ++W +++GYA
Sbjct: 394 EGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYA 453
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+ G + + LFESM G+KPD +T +G+LSACS GLVEKG + F SM ++G++P
Sbjct: 454 QFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQ 513
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
HYTCM+DL RAGR++EA+N + MPF PDA +W LL +CR YG ++ + AAE + E
Sbjct: 514 DHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLME 573
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDT 663
++P N YVLLS++YAA G+W +V+++R MRD+G++K G SW++ +N+VH FS D
Sbjct: 574 LDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDK 633
Query: 664 LHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI 723
+P D+IY+ LE+L +K+ ++G+V VLHDVG+ EK ML +HSEKLA+A+G+L I
Sbjct: 634 SNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFI 693
Query: 724 PAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P G PIRV+KNLRVC DCHNA K+ISKI R I++RD RFH F G+CSCGD+W
Sbjct: 694 PPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 244/467 (52%), Gaps = 47/467 (10%)
Query: 138 SLSAARNL----FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
+ + A+NL + +P + N ++S YA+ G A ++FD+M N SWN +L+
Sbjct: 24 NFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILS 83
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD------E 247
AY + GR+ E LF++ + VSWNSL+ G+ + + ++ M D
Sbjct: 84 AYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNR 143
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
++++T++ ++ + +++ + VF + +V Y + G + AR +FD
Sbjct: 144 ITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDE 203
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
+PEKN V +N +I G ++ R++ ++ LF M ++ SW +MITG+ Q+G
Sbjct: 204 LPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG--------L 255
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
DR D++ +F EMK ++++ F SVL+ C + +L+
Sbjct: 256 DR-----------------------DAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQ 292
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
GKQ+H +++ ++ FV +AL+ MYCKC +++ A F+++ K+V+SW M+ GY
Sbjct: 293 EGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYG 352
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
++G+ ++A+ F M+ GI+PDD T+ ++S+C++ +E+G + F++ G+I
Sbjct: 353 QNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFI 411
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
+V L G+ G ++++ L + F+ D TW AL+ +GK
Sbjct: 412 TVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGK 457
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 299/746 (40%), Positives = 431/746 (57%), Gaps = 63/746 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--KRD 153
N +I Y + +L+ AR +FD++PQ D+V+ +I+ Y L +R +F P RD
Sbjct: 52 NRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRD 111
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACM--- 206
V +N M++ Y+ N AA +F M N ++ +L A E+ C
Sbjct: 112 SVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLH 171
Query: 207 --LFESKANWEVVSWNSLMGGFVK---------QKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ +S + N+L+ +VK + +A+ +FD MP RDE+SW T+IT
Sbjct: 172 CAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIIT 231
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----------- 304
GY +NN L A+ K W AM+SGY G EA +F M
Sbjct: 232 GYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFT 291
Query: 305 --------------------------------PEKNTVSWNAMIAGYVQTKRMDMARELF 332
P+ NA+I Y + ++D+A+E+F
Sbjct: 292 FTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIF 351
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
M +++ SWN +++GY + A++ F+ MP+ + +SW +I+G AQ G++E++L+
Sbjct: 352 NKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALK 411
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
F MK G F + +C+ L SL+ G+QLH Q+V+ G+E+ GNAL+ MY
Sbjct: 412 FFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYA 471
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+CG V+ A+ F + D ISWN MIA +HG G A+ LFE M GI PD I+ +
Sbjct: 472 RCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLT 531
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
++SACSH GLV++G +YF SM+ YGV P+ +HY ++DLL RAG+ EA+ +M++MPFE
Sbjct: 532 VISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFE 591
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
P A W ALL CR++G +L +AAE +FE++P++ G YVLLSN+YA +G+W D++KVR
Sbjct: 592 PGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVR 651
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
MRDRGVKK G SW+EV+NKVH+F VGD HPE +IY YLE+L ++++ G+V TK
Sbjct: 652 KLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTK 711
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLHDV + KEH L HSEKLAVAYG + +P G +RV KNLR+C DCHNA K +SK+V
Sbjct: 712 CVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVV 771
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
GR I++RD RFHHF G CSCGDYW
Sbjct: 772 GREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 185/472 (39%), Gaps = 99/472 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D W IT +++N D+A N ++ V++NAMISGY G A ++F +M
Sbjct: 222 DELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMI 281
Query: 119 ------------------------------------------PQRDLVSWNVMISGYVRN 136
P + N +I+ Y +
Sbjct: 282 MSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKC 341
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ A+ +F MP+RD+VSWN +LSGY D A+ F+ M EKN +SW +++
Sbjct: 342 GKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLA 401
Query: 197 QNGRIEEACMLFE------------------------------SKANWEVVSW------- 219
Q G EEA F + + +VV +
Sbjct: 402 QIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLS 461
Query: 220 --NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EA 273
N+L+ + + + A +F MP D +SWN MI Q+ +A LFE E
Sbjct: 462 AGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEG 521
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMA 328
+ D ++ ++S G V E R FD+M V+ + +I + + A
Sbjct: 522 ILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEA 581
Query: 329 RELFEAMTCKNVAS-WNTMITGYAQSGE----ITHARNLFDRMPQHDCISWAAIIAGYAQ 383
+E+ E+M + A W ++ G G I A LF+ PQHD ++ + YA
Sbjct: 582 KEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDG-TYVLLSNMYAV 640
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+G D ++ M+ G + + P S + + S +G H ++ ++
Sbjct: 641 AGQWNDMAKVRKLMRDRG--VKKEPGCSWIEVENKVHSFLVGDANHPEVRQI 690
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+ DS+R RYG L S +S L + +H ++ GF+ + N
Sbjct: 3 TPDSIR--TAANRYGSLLQICCLQSPIS-------YSLARPVHAHMIASGFQPRGHILNR 53
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ +Y K + A + F+EI D+++ T+IA Y+ G K + +F S +G++ D
Sbjct: 54 LIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIF-SDTPLGMR-D 111
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
+ +++A SH E F M RD P++ +T ++ L
Sbjct: 112 SVFYNAMITAYSHNHDGHAAIELFCDMQRD-NFRPDNYTFTSVLGALA 158
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/564 (47%), Positives = 388/564 (68%), Gaps = 1/564 (0%)
Query: 216 VVSWNSLMGGFVKQK-RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
V+WNS++ G K++ +L +A+ +F ++P D VS+NTM++ Y +N+ + AQ FE+ P
Sbjct: 6 TVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMP 65
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
+KD +W M++G+ QN ++D+AR +F MP KN V+WNAMI+GYV+ +D A +LFE
Sbjct: 66 IKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEK 125
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
K+V +W MITGY + G I A LF++MP+ + ++W A+IAGY ++ +ED ++LF
Sbjct: 126 APFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLF 185
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M +G + N S +S L C+ L++L+LG+Q+H + K G +L+ MYCKC
Sbjct: 186 RTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKC 245
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G +E+ + F ++ +DV++WN MI+GYA+HG GK AL LF+ M G+KPD IT V +L
Sbjct: 246 GVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVL 305
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
AC+H G + G +YF+SM +DYG++ HYTCMVDLLGRAG+L EA +L++ MPF+P
Sbjct: 306 MACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPH 365
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
AA +G LLGACR++ TE+AE A++ + ++P +A YV L+N+YAA+ RW V++VR
Sbjct: 366 AAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKS 425
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
M+ V K GYSW+EV++ H F GD HPE I+ L+ELE K+K G+V +
Sbjct: 426 MKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFA 485
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
LHDVGEE+KE +L +HSEKLA+AYG++ +P G PIRV KNLRVC DCH AIK+IS+I R
Sbjct: 486 LHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERR 545
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
II+RD RFHHF G CSC DYW
Sbjct: 546 EIIVRDTTRFHHFKDGHCSCADYW 569
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 179/345 (51%), Gaps = 24/345 (6%)
Query: 47 SKSRNKPKPAGDW-------DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMI 99
SK R K K A + D +N ++ ++RN + A F MP + + S+N MI
Sbjct: 17 SKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMI 76
Query: 100 SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+G+ N Q+D AR +F MP +++V+WN MISGYV L +A LFE P + VV+W
Sbjct: 77 TGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTA 136
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES------KAN 213
M++GY + G A R+F++M EKN ++WN ++A Y++N R E+ LF + + N
Sbjct: 137 MITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPN 196
Query: 214 WEVVSWNSLMGGFVKQKRLG-DAKWIFDRMPVRDEVSWNT-MITGYAQNNYLAEAQRLFE 271
+S L + +LG + + P+ D+ + T +I+ Y + L + +LF
Sbjct: 197 SSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFV 256
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDM 327
+ P +DV TW AM+SGY Q+G+ +A +FD M EK +++ A++ D+
Sbjct: 257 QVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDL 316
Query: 328 ARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ F +M + M+ ++G++ A +L ++MP
Sbjct: 317 GVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMP 361
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 184/360 (51%), Gaps = 76/360 (21%)
Query: 87 MPRRSSVSYNAMISGYLLN-GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNL 145
M +++V++N++++G G+L A+++F ++P+ D VS+N M+S YVRN ++ A+
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
FE MP +D SWNTM++G+AQN D AR +F M KN ++WN +++ YV+ G ++ A
Sbjct: 61 FEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSAL 120
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
LFE VV+W +++ G++K R+G A+ +F++MP ++ V+WN MI GY +N+ +
Sbjct: 121 KLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAED 180
Query: 266 AQRLFE--------------------------------------EAPV-KDVFTWTAMVS 286
+LF ++P+ D T+++S
Sbjct: 181 GVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLIS 240
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
Y + G +++ +F +P ++ V+WNAMI+GY
Sbjct: 241 MYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGY--------------------------- 273
Query: 347 ITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYG 401
AQ GE A LFD M + D I++ A++ +G+++ ++ F M K YG
Sbjct: 274 ----AQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYG 329
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 470 KDVISWNTMIAGYA-RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
K ++WN+++AG + + G K+A LF + +PD ++ +LS +E+
Sbjct: 4 KTTVTWNSVLAGMSKKRGKLKEAQELFVKIP----EPDAVSYNTMLSCYVRNSNMERAQA 59
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+F M I ++ + M+ + ++D+A++L MP + + TW A++
Sbjct: 60 FFEDMP-----IKDTPSWNTMITGFAQNQQMDKARDLFLIMPTK-NVVTWNAMISGYVEC 113
Query: 589 GKTELAEKAAEVIFEMEP-ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
G + A K +FE P ++ + + Y GR G ++ KM ++ +
Sbjct: 114 GDLDSALK----LFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNL 162
>gi|144923518|gb|ABP02616.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 501
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 260/413 (62%), Positives = 331/413 (80%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
IS ++ NG A +VFD MP ++L SWN+M++GYV+N+ L ARNLF++MP++D VSWN
Sbjct: 34 ISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWN 93
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
MLSGY ++G D A+ +FD M K+ ISWNGLLA YVQNGR+EEA LFESK +WE++S
Sbjct: 94 VMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELIS 153
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
WN LMGG+VK+K LGDA+ +FD MPVR+ +SWNTMI+GYA++ L +A+RLFEE+PV+DV
Sbjct: 154 WNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDV 213
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
FTWTAMV YVQ+G +DEAR +FD MP K +++N MIAGYVQ K+MDMARELFEAM C+
Sbjct: 214 FTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCR 273
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
NV SWNT+I+GY Q+G+I AR LFD M Q DC+SWAAIIAGYAQ+G+ E + + ++MK
Sbjct: 274 NVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMK 333
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
R G+ LNRS F LSTCA +A+L LGKQ+HGQ VK G++ GC VGNALL MYCKCGS+
Sbjct: 334 RDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIG 393
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
EAY FE + KD+ISWNTM+AGYARHGFG+ AL++F+SMKT G KPD+ITM+
Sbjct: 394 EAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITML 446
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 206/352 (58%), Gaps = 12/352 (3%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WNV ++ ++R+GC D A VF++MP + S+S+N +++ Y+ NG+L+ AR++F+
Sbjct: 88 DAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKV 147
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+L+SWN ++ GYV+ K L AR LF+ MP R+ +SWNTM+SGYA++G ARR+F+
Sbjct: 148 DWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEE 207
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
++ +W ++ AYVQ+G ++EA +F+ +++N ++ G+V+ K++ A+ +F
Sbjct: 208 SPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELF 267
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+ MP R+ SWNT+I+GY QN +A+A+ LF+ +D +W A+++GY Q G ++
Sbjct: 268 EAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMH 327
Query: 300 IFDAMPEKN----------TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+ M +S A +A V K++ + + N ++
Sbjct: 328 MLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVH--GQAVKTGYDNGCLVGNALLEM 385
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
Y + G I A ++F+RM D ISW ++AGYA+ G+ +L +F MK G
Sbjct: 386 YCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAG 437
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 224/421 (53%), Gaps = 27/421 (6%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
++ +++NG A +F+S + SWN ++ G+VK +RL DA+ +FD MP +D VSWN
Sbjct: 34 ISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWN 93
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
M++GY ++ + EA+ +F+ P KD +W +++ YVQNG+++EAR +F++ + +S
Sbjct: 94 VMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELIS 153
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
WN ++ GYV+ K + AR LF+ M +N SWNTMI+GYA+ G++ AR LF+ P D
Sbjct: 154 WNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDV 213
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+W A++ Y QSG +++ R+F EM G+R + +++ +++ ++L
Sbjct: 214 FTWTAMVFAYVQSGMLDEARRVFDEMP--GKR--EMAYNVMIAGYVQYKKMDMAREL--- 266
Query: 432 LVKVGFEA-GCF-VG--NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
FEA C VG N ++ Y + G + +A F+ + +D +SW +IAGYA+ G
Sbjct: 267 -----FEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGH 321
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF---YSMNRDYGVIPNSK 544
+ + + MK G + T LS C+ + G + D G + +
Sbjct: 322 YEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGN- 380
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
++++ + G + EA ++ + M + D +W +L Y + +A V M
Sbjct: 381 ---ALLEMYCKCGSIGEAYDVFERMQLK-DIISWNTMLAG---YARHGFGRQALLVFDSM 433
Query: 605 E 605
+
Sbjct: 434 K 434
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 70/285 (24%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISG---------------- 101
DW++ WN + +++ A +F+ MP R+++S+N MISG
Sbjct: 148 DWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEE 207
Query: 102 ---------------YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
Y+ +G LD AR+VFD+MP + +++NVMI+GYV+ K + AR LF
Sbjct: 208 SPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELF 267
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE--- 203
E MP R+V SWNT++SGY QNG AR +FD M +++ +SW ++A Y Q G E+
Sbjct: 268 EAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMH 327
Query: 204 ---------------------------ACMLFESKANWEVVSW---------NSLMGGFV 227
A ++ + + + V N+L+ +
Sbjct: 328 MLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYC 387
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
K +G+A +F+RM ++D +SWNTM+ GYA++ + +A +F+
Sbjct: 388 KCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDS 432
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 296/736 (40%), Positives = 446/736 (60%), Gaps = 13/736 (1%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
P GD + R N+ I + G D+A VFN + + S++ +I Y+ + ++ AR +
Sbjct: 37 PHGD-NRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARAL 95
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE-MMPKRDVVSWNTMLSGYAQNGYADAA 173
FD MP D +WN+MI+ Y R L AR LF M+ RDVVSW +++GYA++ + A
Sbjct: 96 FDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEEA 155
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE---SKANWEVVSWNSLMGGFVKQK 230
+F RM + ++ +L Y NG + EA LF+ + + + N+++ + K
Sbjct: 156 SALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDATACNAMIAAYGKNA 215
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
R+ A+ +F ++ +R+ SW+ ++ YAQN +L A++ F+ P +D +TAM +
Sbjct: 216 RVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSD 275
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW---NTMI 347
G++ AR + + + ++WNA++ GY +T +D R LF AM + VA+ T++
Sbjct: 276 QGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGTLV 335
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
Y + G + AR + D MP +SW A+IA YAQ+G + +++ LF M G +
Sbjct: 336 NLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDI 395
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
SV+ +CA L +L LGK++H ++ F + NA++ MY KCG++E A FE
Sbjct: 396 TLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFES 455
Query: 467 IV--DKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLV 523
+ + V++W MI YA++G G++A+ LF+ M G +P+ +T + +LSACSH G +
Sbjct: 456 VPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQL 515
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM-KNMPFEPDAATWGALL 582
E+ E+F SM D+GV P HY C+VDLLGRAGRL EA+ L+ ++ FE D W A L
Sbjct: 516 EQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFL 575
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
AC++ G E +++AA+ + E+EPEN VLLSN+YAA GR DV+++R +M+ GVKK
Sbjct: 576 SACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKK 635
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G SW+E+ N+VH F V D HP K IY+ LE L ++K+ G+V TK+VL DV EE+
Sbjct: 636 FAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEK 695
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
K +L YHSE+LA+A GI+S P G +RV+KNLRVC DCH A K IS+IVGR II+RD +
Sbjct: 696 KAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTS 755
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF G CSCGDYW
Sbjct: 756 RFHHFKDGVCSCGDYW 771
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/642 (41%), Positives = 414/642 (64%), Gaps = 5/642 (0%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
AR +F+ + RD SW MLS YA++G A+ +FDRM + SW LL+A+ +G
Sbjct: 11 ARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHH 70
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
EEA LF++ ++++W ++ + DAK+ FD+MP RD V+W M+ A+
Sbjct: 71 EEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERG 130
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
+ A+ F++ P +++F+WT+++S Y ++G V A +FD+MPE N V+W AM+ GY
Sbjct: 131 QMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSL 190
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
+ + A+ F++M +++ +W M++ YA +G + + R +F RMP+ D ISWA ++A
Sbjct: 191 SGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAAL 250
Query: 382 AQSGYSEDSLRLFIEMKRY-----GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
++ E+S LF M R+ G NR F ++L C+ L +L G+++H + + G
Sbjct: 251 VENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERG 310
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
F+ V NAL+ Y +CG++ +A F+ + +DVISW++MI+ +A+ G +A+ L+
Sbjct: 311 FDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYH 370
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M + G PDDI + +L ACS++G+VE ++F S+ D V P +HY CMVD+LGRA
Sbjct: 371 RMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRA 430
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G+L +A++L++ MPF P + +L AC+LY E E AAEV+FE++PEN+ Y+ L+
Sbjct: 431 GKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLA 490
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+Y+A+ R D +++R M +RG+KK G SW+EV ++VH F GD +HP++D IYA ++
Sbjct: 491 NIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQ 550
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
L ++K+ G+ TK+VL DV E+EKE++L YHSEKLA+A+G++S P G P+R++KNLR
Sbjct: 551 RLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLR 610
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC DCH A K ISK+ GR I++RD NRFHHF G CSC DYW
Sbjct: 611 VCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 261/538 (48%), Gaps = 54/538 (10%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ 107
++R D D W + ++ + R+G +A VF+ MPR S S+ A++S + L+G
Sbjct: 10 RARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGH 69
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+ A+ +FD M +RDL++W +M++ ++ A+ F+ MP+RD+V+W ML+ A+
Sbjct: 70 HEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAER 129
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV 227
G + AR FD+M E+N SW LL+AY ++G ++ A +F+S W +V+W +++ G+
Sbjct: 130 GQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYS 189
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
+ AK FD MP RD ++W M++ YA N +L + +F+ P +D+ +W MV+
Sbjct: 190 LSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAA 249
Query: 288 YVQNGKVDEARMIFDAMPE---------KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
V+N ++E++ +FD MP N V++ ++ + R++ A+ +
Sbjct: 250 LVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAER 309
Query: 339 ----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
++ N ++ Y + G + A+ +FD M + D ISW+++I+ +AQ G ++++ L+
Sbjct: 310 GFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELY 369
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M G + F SVL C+N +E +V
Sbjct: 370 HRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIV--------------------- 408
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G + V+ + + M+ R G +DA L M P + + +L
Sbjct: 409 GDTQ---------VEPTLEHYACMVDVLGRAGKLRDAEDLLRLMP---FHPGPLLYMTML 456
Query: 515 SACSHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
SAC VE+G E + ++ + NS Y + ++ A R +A + K M
Sbjct: 457 SACKLYTDVERGEAAAEVVFELDPE-----NSSPYITLANIYSAAKRPKDAARIRKLM 509
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
M+ + G VE A F+ I D+D SW M++ YAR G +A +F+ M + +
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG----S 56
Query: 510 MVGILSACSHTGLVEKGTEYFYSMN-RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
+LSA + +G E+ F +M RD +T M+ +L +++A+
Sbjct: 57 WTALLSAFALSGHHEEAKTLFDTMQERDLIA------WTIMLTVLATFSNIEDAKYHFDQ 110
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MP E D W A+L A G+ E A + F+ PE ++L +A GR GDV
Sbjct: 111 MP-ERDLVAWTAMLAANAERGQMENARET----FDQMPERN--LFSWTSLLSAYGRSGDV 163
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 292/740 (39%), Positives = 438/740 (59%), Gaps = 61/740 (8%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--KRDVV 155
+I Y L+G L A +F P V+ +++ Y L AA + F+ +P +RD V
Sbjct: 65 LIHLYTLSGDLPAAATLFRADPCP--VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTV 122
Query: 156 SWNTMLSGYAQNGYADAARRIFDRML-----EKNEISWNGLLAA--YVQNGRIEEA---- 204
N ++S YA+ +A A +F +L ++ S+ LL+A ++ N +
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQ 182
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLG---DAKWIFDRMPVRDEVSWNTMITGYAQNN 261
C + +S A + N+L+ ++K + L DA+ + D MP +D ++W TM+ GY +
Sbjct: 183 CSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRG 242
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMP----------- 305
+ A+ +FEE VK W AM+SGYV +G V EA RM+ + +P
Sbjct: 243 DVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLS 302
Query: 306 ---------------------EKNTVSW------NAMIAGYVQTKRMDMARELFEAMTCK 338
+ N V NA++ Y + + +AR +F+ M K
Sbjct: 303 ACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK 362
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+V SWNT+++GY +S + A +F+ MP + +SW +++GY G+SED+L+LF M+
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMR 422
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ + +S C L SL+ GKQLHG LV++GFE GNAL+ MY +CG+V+
Sbjct: 423 AEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVK 482
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
EA F + + D +SWN MI+ +HG G++AL LF+ M GI PD I+ + +L+AC+
Sbjct: 483 EANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H+GLV++G +YF SM RD+G+IP HYT ++DLLGRAGR+ EA++L+K MPFEP + W
Sbjct: 543 HSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
A+L CR G EL AA+ +F+M P++ G Y+LLSN Y+A+GRW D ++VR MRDR
Sbjct: 603 EAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 662
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
GVKK G SW+E NKVH F VGDT HPE ++Y +LE + ++++ G+V TK+VLHD+
Sbjct: 663 GVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDM 722
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+KEH+L HSE+LAV +G+L +P G + V+KNLR+C+DCH + +SK VGR I++
Sbjct: 723 EPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVV 782
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD RFHHF G CSCG+YW
Sbjct: 783 RDVRRFHHFKDGECSCGNYW 802
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 196/474 (41%), Gaps = 99/474 (20%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D W + ++R G +A VF + + V +NAMISGY+ +G + A ++F +
Sbjct: 225 DKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRR 284
Query: 118 M-------------------------------------------PQRDLVSWNVMISGYV 134
M P+ L N +++ Y
Sbjct: 285 MVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYS 344
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
+ +++ AR +F+ M +DVVSWNT+LSGY ++ D A +F+ M KNE+SW +++
Sbjct: 345 KCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSG 404
Query: 195 YVQNGRIEEACMLFESKANWEV-------------------------------------- 216
YV G E+A LF +V
Sbjct: 405 YVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGS 464
Query: 217 -VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---- 271
+ N+L+ + + + +A +F MP D VSWN MI+ Q+ + EA LF+
Sbjct: 465 NSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA 524
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMD 326
E D ++ +++ +G VDE F++M + + +I + R+
Sbjct: 525 EGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIG 584
Query: 327 MARELFEAMTCKNVAS-WNTMITGYAQSGEI---THARN-LFDRMPQHDCISWAAIIAGY 381
AR+L + M + S W +++G SG++ HA + LF PQHD ++ + Y
Sbjct: 585 EARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG-TYILLSNTY 643
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+ +G D+ R+ M+ G + + P S + + +G H + KV
Sbjct: 644 SAAGRWVDAARVRKLMRDRG--VKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKV 695
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 299/747 (40%), Positives = 423/747 (56%), Gaps = 65/747 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK--RD 153
N +I Y + L A +FD++ Q D+V+ +I+ + + + AR +F P RD
Sbjct: 54 NRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRD 113
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEK-------NEISWNGLLAAYVQNGRIEEA-- 204
V +N M++GY+ N A +F +L S G LA V++ + +
Sbjct: 114 TVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIH 173
Query: 205 CMLFESKANWEVVSWNSLMGGFVK---------QKRLGDAKWIFDRMPVRDEVSWNTMIT 255
C + +S + + N+L+ FVK + A+ +FD M RDE+SW TMI
Sbjct: 174 CAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIA 233
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW--- 312
GY +N L A++ + K V W AM+SGYV +G EA +F M + W
Sbjct: 234 GYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLG-IQWDEF 292
Query: 313 -----------------------------------------NAMIAGYVQTKRMDMAREL 331
NA+ Y + ++D AR++
Sbjct: 293 TYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQV 352
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F M K++ SWN +++GY +G I A++ F+ MP+ + ++W +I+G AQ+G+ E+SL
Sbjct: 353 FNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESL 412
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+LF MK G F + CA LA+L G+QLH QLV++GF++ GNAL+ MY
Sbjct: 413 KLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMY 472
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG VE A+ F + D +SWN MIA +HG G AL LFE M I PD IT +
Sbjct: 473 AKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFL 532
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
+LS CSH GLVE+G YF SM+ YG+ P HY M+DLL RAG+ EA+++++ MP
Sbjct: 533 TVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPV 592
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
EP W ALL CR++G +L +AAE +FE+ P++ G YVLLSN+YA GRW DV+KV
Sbjct: 593 EPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKV 652
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R MRD+GVKK G SW+EV+NKVH F V D +HPE +Y YLEEL K+++ G++ T
Sbjct: 653 RKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDT 712
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
K VLHD+ E+KE++L HSEKLAV +G+L +P G +RV KNLR+C DCHNA K +SK+
Sbjct: 713 KFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKV 772
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
V R I++RD RFHHF G CSCG+YW
Sbjct: 773 VEREIVVRDGKRFHHFKNGECSCGNYW 799
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 290/729 (39%), Positives = 435/729 (59%), Gaps = 26/729 (3%)
Query: 76 CCDS-------ALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
CC+S LH + ++ + + N +I+ Y G L A VFD +PQ +L SW
Sbjct: 15 CCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSW 74
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N ++S Y + LS + +F +MP RD VSWN +SGYA G A R++ ML+ +
Sbjct: 75 NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSW---------NSLMGGFVKQKRLGDAKW 237
+ N + + + + C+ + N +++ + + L+ + K + DAK
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
FD MP R+ V NTMITG + + E+QRLF +D +WT M++G +QNG EA
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREA 254
Query: 298 RMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITG 349
+F M + ++ +++ + +++ + NV + ++
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDM 314
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y++ I A +F RMPQ + ISW A++ GY Q+G+SE+++++F EM+R G +
Sbjct: 315 YSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTL 374
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
SV+S+CANLASLE G Q H + + G + V NAL+ +Y KCGS E ++ F E+
Sbjct: 375 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI 434
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+D +SW ++AGYA+ G + + LFE M G+KPD +T +G+LSACS GLVEKG +Y
Sbjct: 435 RDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQY 494
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F SM +++G++P H TC++DLLGRAGRL+EA+N + NMP PD W LL +CR++G
Sbjct: 495 FESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
E+ + AA+ + +EP+N YVLLS+LYA+ G+W V+++R MRD+ V+K GYSW+
Sbjct: 555 DMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWI 614
Query: 650 EVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY 709
+ + KVH FS D P +IYA LE+L +K+ ++G+V VLHDV E EK ML +
Sbjct: 615 KYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNH 674
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSEKLA+A+G++ +P G PIRV+KNLRVC DCHNA K ISKI R I++RD RFH F
Sbjct: 675 HSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKD 734
Query: 770 GSCSCGDYW 778
G+CSCGD+W
Sbjct: 735 GTCSCGDFW 743
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 223/500 (44%), Gaps = 78/500 (15%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ----- 107
P+P ++ WN ++ + + G +FN MP R VS+N ISGY G
Sbjct: 67 PQP----NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAV 122
Query: 108 -------------------------------LDPARQVFDQMPQ----RDLVSWNVMISG 132
+D RQ+ Q+ + D+ + ++
Sbjct: 123 RVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDM 182
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
Y + + A+ F+ MP+R+VV NTM++G + G + ++R+F + E++ ISW ++
Sbjct: 183 YTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMI 242
Query: 193 AAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVR 245
+QNG EA +F + + ++ S++ LG+ K I R +
Sbjct: 243 TGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHK 302
Query: 246 DEV-SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
D V + ++ Y++ + A+ +F+ P K+V +WTAM+ GY QNG +EA IF M
Sbjct: 303 DNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEM 362
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMAR-ELFEAMTCKNVASW--------NTMITGYAQSGE 355
++N V + G V + ++A E C+ + S N +IT Y + G
Sbjct: 363 -QRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGS 421
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
++ LF M D +SW A++AGYAQ G + +++ LF M +G + + F VLS
Sbjct: 422 TENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSA 481
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC--------GSVEEAYHAFEEI 467
C+ +E G Q ++K E G +V +C C G +EEA + +
Sbjct: 482 CSRAGLVEKGLQYFESMIK---EHGIMP----IVDHCTCIIDLLGRAGRLEEARNFINNM 534
Query: 468 -VDKDVISWNTMIAGYARHG 486
DV+ W T+++ HG
Sbjct: 535 PCHPDVVGWATLLSSCRVHG 554
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 63/236 (26%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ S+L C + K+LH ++K + F+ N L+ Y K G++ A+H F+ I
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 469 DKDVISWNTMI-------------------------------AGYARHGFGKDALMLFES 497
++ SWNT++ +GYA +G DA+ +++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 498 M-KTVGIKPDDITMVGILSACSHTGLVEKGTEY------------------FYSMNRDYG 538
M K + + IT +L CS V+ G + M G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 539 VIPNSKHY------------TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+I ++K Y M+ L R G ++E+Q L + E D+ +W ++
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLK-ERDSISWTIMI 242
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/818 (36%), Positives = 451/818 (55%), Gaps = 106/818 (12%)
Query: 52 KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA 111
+P PA D R+ + I ++ G F++ RS N ++ L GQ+ A
Sbjct: 23 QPSPATFLDTRRVDARI---IKTG--------FDTDTCRS----NFIVEDLLRRGQVSAA 67
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
R+V+D+MP ++ VS N MISG+V+ +S+AR+LF+ MP R VV+W ++ YA+N + D
Sbjct: 68 RKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFD 127
Query: 172 AARRIFDRMLEK------NEISWNGLLA----AYVQN--GRIEEACMLFESKANWEVVSW 219
A ++F +M + +++ LL A QN G++ + N +
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS 187
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPV 275
N L+ + + +RL A +F+ +P +D V++NT+ITGY ++ E+ LF +
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 276 KDVFTWTAMVSG-----------------------------------YVQNGKVDEARMI 300
FT++ ++ Y ++ +V E RM+
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC-----------------KNVASW 343
FD MPE + VS+N +I+ Y Q + + + F M C N++S
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 344 ----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
N+++ YA+ A +F +PQ +SW A+I+GY
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
Q G L+LF +M+ R ++S F +VL A+ ASL LGKQLH +++ G
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENV 487
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
F G+ L+ MY KCGS+++A FEE+ D++ +SWN +I+ +A +G G+ A+ F M
Sbjct: 488 FSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIES 547
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G++PD ++++G+L+ACSH G VE+GTEYF +M+ YG+ P KHY CM+DLLGR GR E
Sbjct: 548 GLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP-ENAGMYVLLSNLYA 620
A+ LM MPFEPD W ++L ACR++ LAE+AAE +F ME +A YV +SN+YA
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYA 667
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
A+G W V V+ MR+RG+KKV YSW+EV +K+H FS D HP D I + EL
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
+++++G+ T V+ DV E+ K L+YHSE+LAVA+ ++S P G PI VMKNLR C D
Sbjct: 728 EIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRD 787
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH AIK ISKIV R I +RD +RFHHFS G CSCGDYW
Sbjct: 788 CHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 288/742 (38%), Positives = 434/742 (58%), Gaps = 65/742 (8%)
Query: 98 MISGYLLNGQLDPARQVF--DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--KRD 153
+I Y L+ L A +F D P VS +++ Y L AA + F+ +P +RD
Sbjct: 65 LIHLYTLSRDLPAAATLFCADPCP----VSATSLVAAYAAADRLPAAVSFFDAVPPARRD 120
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRML-----EKNEISWNGLLAA--YVQNGRIEEA-- 204
V N ++S YA+ +A A +F +L ++ S+ LL+A ++ N +
Sbjct: 121 TVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQ 180
Query: 205 --CMLFESKANWEVVSWNSLMGGFVK---QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
C + +S A + N+L+ ++K + DA+ + D MP +D+++W TM+ GY +
Sbjct: 181 LHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVR 240
Query: 260 NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM--------------- 304
+ A+ +FEE K W AM+SGYV +G EA +F M
Sbjct: 241 RGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSV 300
Query: 305 ----------------------------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
PE NA++ Y + + +AR +F+ MT
Sbjct: 301 LSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMT 360
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
K+V SWNT+++GY +S + A +F+ MP + +SW +++GY G++ED+L+LF +
Sbjct: 361 LKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNK 420
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ + + ++ C L +L+ GKQLHG +V++GFE GNAL+ MY +CG+
Sbjct: 421 MRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGA 480
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
V+EA+ F + + D +SWN MI+ +HG G++AL LF+ M GI PD I+ + +L+A
Sbjct: 481 VKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C+H+GLV++G YF SM RD+G+IP HYT ++DLLGRAGR+ EA++L+K MPFEP +
Sbjct: 541 CNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPS 600
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W A+L CR G EL AA+ +F+M P++ G Y+LLSN Y+A+G W D ++VR MR
Sbjct: 601 IWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMR 660
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
DRGVKK G SW+E NKVH F VGDT HPE +Y +LE + K+++ G+V TK+VLH
Sbjct: 661 DRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLH 720
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
D+ +KEH+L HSE+LAV +G+L++P G + V+KNLR+C+DCH AI +SK VGR I
Sbjct: 721 DMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREI 780
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
++RD RFHHF G CSCG+YW
Sbjct: 781 VVRDVRRFHHFKDGECSCGNYW 802
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 216/504 (42%), Gaps = 108/504 (21%)
Query: 16 LHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITT----H 71
LH + L +P P+P HL + SR+ P A + V+ T+ +
Sbjct: 43 LHARLLTSALLHAP----PHPHLTLRLIHLYTLSRDLPAAATLFCADPCPVSATSLVAAY 98
Query: 72 MRNGCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVF-------------- 115
+A+ F+++P RR +V +NA+IS Y PA VF
Sbjct: 99 AAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDY 158
Query: 116 ---------DQMPQRD-------------------LVSWNVMISGYVRNKSLSA---ARN 144
+P L N +++ Y++ +S A AR
Sbjct: 159 SFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARK 218
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+ + MP +D ++W TM+ GY + G AAR +F+ + K ++ WN +++ YV +G EA
Sbjct: 219 VLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEA 278
Query: 205 CMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW---------N 251
LF + + ++ S++ K + ++ +R + ++ N
Sbjct: 279 FELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQI-IRLQPNFVPEAALPVNN 337
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
++T Y++ +A A+R+F+ +KDV +W ++SGYV++ +D+A +F+ MP KN +S
Sbjct: 338 ALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELS 397
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNV------------------------------- 340
W M++GYV + A +LF M +NV
Sbjct: 398 WMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIV 457
Query: 341 --------ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
++ N +IT YA+ G + A +F MP D +SW A+I+ Q G+ ++L
Sbjct: 458 QLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALE 517
Query: 393 LFIEMKRYGERLNRSPFTSVLSTC 416
LF M G +R F +VL+ C
Sbjct: 518 LFDRMVAEGIYPDRISFLTVLTAC 541
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 26/342 (7%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
V + MP + +++ M+ GY+ G + AR VF+++ + V WN MISGYV + A
Sbjct: 219 VLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEA 278
Query: 143 RNLFEMM----PKRDVVSWNTMLSGYAQNGYADAARRIFDRM--LEKNEISW------NG 190
LF M D ++ ++LS A G + + ++ L+ N + N
Sbjct: 279 FELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNA 338
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
L+ Y + G I A +F++ +VVSWN+++ G+V+ L A +F+ MP ++E+SW
Sbjct: 339 LVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSW 398
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVS-----GYVQNGKVDEARMIF 301
M++GY + +A +LF + ++V +T+ ++ G +++GK ++
Sbjct: 399 MVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQ 458
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
N+ + NA+I Y + + A +F M + SWN MI+ Q G A
Sbjct: 459 LGFEGSNS-AGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALE 517
Query: 362 LFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
LFDRM D IS+ ++ SG ++ R F MKR
Sbjct: 518 LFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKR 559
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 172/345 (49%), Gaps = 31/345 (8%)
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
N +P + NA+++ Y G + AR++FD M +D+VSWN ++SGYV + L A
Sbjct: 326 NFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVE 385
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGR 200
+FE MP ++ +SW M+SGY G+A+ A ++F++M +N + ++ G +AA + G
Sbjct: 386 VFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGA 445
Query: 201 IEEACML--------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
++ L FE + + N+L+ + + + +A +F MP D VSWN
Sbjct: 446 LKHGKQLHGHIVQLGFEGSNS----AGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNA 501
Query: 253 MITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
MI+ Q+ + EA LF+ E D ++ +++ +G VDE F++M
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDF 561
Query: 309 TV-----SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEI---THA 359
+ + +I + R+ AR+L + M + S W +++G SG++ HA
Sbjct: 562 GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHA 621
Query: 360 RN-LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+ LF PQHD ++ + Y+ +G D+ R+ M+ G +
Sbjct: 622 ADQLFKMTPQHDG-TYILLSNTYSAAGCWVDAARVRKLMRDRGVK 665
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 153/314 (48%), Gaps = 27/314 (8%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N +T + + G A +F++M + VS+N ++SGY+ + LD A +VF++MP ++ +
Sbjct: 337 NALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNEL 396
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG-YAQNGYADAAR-------RI 176
SW VM+SGYV A LF M +V + +G A G A + I
Sbjct: 397 SWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHI 456
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
E + + N L+ Y + G ++EA ++F N + VSWN+++ + +A
Sbjct: 457 VQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREAL 516
Query: 237 WIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEE-------APVKDVFTWTAMV 285
+FDRM D +S+ T++T + + E R FE P +D +T ++
Sbjct: 517 ELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGED--HYTRLI 574
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDM----ARELFEAMTCKNV 340
+ G++ EAR + MP + T S W A+++G + M++ A +LF+ MT ++
Sbjct: 575 DLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFK-MTPQHD 633
Query: 341 ASWNTMITGYAQSG 354
++ + Y+ +G
Sbjct: 634 GTYILLSNTYSAAG 647
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/594 (44%), Positives = 387/594 (65%), Gaps = 1/594 (0%)
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK-QKRLGDAKWIFDRMPV 244
+S N +A++V+ +E A +FE + V+WN+++ G+ K ++ +A +FD++P
Sbjct: 74 VSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE 133
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
D VS+N M+ Y ++ + A F + PVKD+ +W ++SG+ QNG++ +A +F M
Sbjct: 134 PDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM 193
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
PEKN VSW+AMI+GYV+ ++ A EL++ + K+V M+TGY + G++ A +F
Sbjct: 194 PEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQ 253
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
RM + ++W ++IAGY ++ +ED L++F M R N +SVL C+NL++L L
Sbjct: 254 RMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPL 313
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G+Q+H + K +L+ MYCKCG ++ A+ F E+ KDVISWN MI+GYA+
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQ 373
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HG G+ AL LF+ M+ +KPD IT V ++ AC+H G V+ G +YF SM +++G+
Sbjct: 374 HGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPV 433
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HYTC++DLLGRAGRLDEA +L+K MPF+P AA +G LLGACR++ +LAE AA + +
Sbjct: 434 HYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNL 493
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
+P +A YV L+N+YAA+ +W V+KVR M++ V K+ GYSW+E+++ H F D L
Sbjct: 494 DPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRL 553
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
HPE I+ L EL+ K+K G+V + LHDV EE KE +L +HSEKLA+A+G++
Sbjct: 554 HPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTA 613
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIRV KNLRVC DCH AIK IS I R II+RD RFHHF G CSCGDYW
Sbjct: 614 PGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 204/409 (49%), Gaps = 76/409 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL-LNGQLDPARQVFDQM 118
D+ N I + +R +SA +VF M R++V++N M+SGY + G++ A ++FD++
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P+ D VS+N+M+ Y+R+ + AA F MP +D+ SWNT++SG+AQNG A +F
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
M EKN +SW+ +++ YV++G +E A L+++ VV +++ G++K ++ A+ I
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE--------------------------- 271
F RM V++ V+WN+MI GY +N + ++F+
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 272 -----------EAPV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
++P+ KD T+++S Y + G +D A +F MP K+ +SWNAMI+G
Sbjct: 312 PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISG- 370
Query: 320 VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWA 375
YAQ G A +LFD+M + D I++
Sbjct: 371 ------------------------------YAQHGAGRKALHLFDKMRNGTMKPDWITFV 400
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKR-YGERLNRSPFTSVLSTCANLASLE 423
A+I +G+ + ++ F MK+ +G +T V+ L+
Sbjct: 401 AVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLD 449
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 79/320 (24%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARN--------------------------------LF 363
T +V S N I + ++ ++ ARN LF
Sbjct: 69 TASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF 128
Query: 364 DRMPQHDCI-------------------------------SWAAIIAGYAQSGYSEDSLR 392
D++P+ D + SW +I+G+AQ+G + +
Sbjct: 129 DKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFD 188
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF M N +++++S LE ++L+ VG ++ V A+L Y
Sbjct: 189 LFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELYKN---VGMKS-VVVETAMLTGYM 240
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
K G VE A F+ + K++++WN+MIAGY + +D L +F++M ++P+ +++
Sbjct: 241 KFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG---RAGRLDEAQNLMKNM 569
+L CS+ + G + M++ P SK T L+ + G LD A L M
Sbjct: 301 VLLGCSNLSALPLGRQ----MHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEM 356
Query: 570 PFEPDAATWGALLGACRLYG 589
P D +W A++ +G
Sbjct: 357 P-RKDVISWNAMISGYAQHG 375
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 292/735 (39%), Positives = 439/735 (59%), Gaps = 53/735 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y G + A +VFD+MP + + SWN+++SGY + L A +FE MP+ D V
Sbjct: 52 NNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSV 111
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAY-----VQNGRIEEACM 206
SW M+ GY Q G + A +F M+ + + + +LA+ + GR + +
Sbjct: 112 SWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFV 171
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ +++ V+ NSL+ + K AK +FDRM ++ SWNTMI+ + Q+ + A
Sbjct: 172 VKHGLSSYISVA-NSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLA 230
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS-------- 311
Q FE+ +DV +W AM+SGY Q+G EA IF M P+K T++
Sbjct: 231 QVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACAN 290
Query: 312 -------------------------WNAMIAGYVQTKRMDMARELFEAMTCKN--VASWN 344
NA+I+ Y ++ +++A+++ E N V ++
Sbjct: 291 LENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFT 350
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++ GY + G+I AR +FD + D ++W A+I GY Q+G+++D++ LF M + G +
Sbjct: 351 ALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKP 410
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N ++LS ++LASL+ G+Q+H + G + V NAL+ MY K GS+ +A F
Sbjct: 411 NNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVF 470
Query: 465 EEIV-DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
I +D I+W +MI A+HG G++AL LFE M GIKPD IT VG+LSAC+H GLV
Sbjct: 471 NLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLV 530
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E+G Y+ M + +IP HY CM+DL GRAG L EA ++NMP EPD WG+LL
Sbjct: 531 EQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLA 590
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
+C+++ ELAE AAE + +EPEN+G Y L+N+Y+A G+W + + +R M+D+GVKK
Sbjct: 591 SCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKD 650
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G+SW++++NKVH F V D LHP++D IY + ++ ++K+ GFV T+ VLHD+ EE K
Sbjct: 651 QGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELK 710
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E +L +HSEKLA+A+G++ P +R+MKNLRVC DCH+AIK ISK+VGR II+RD R
Sbjct: 711 EQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATR 770
Query: 764 FHHFSGGSCSCGDYW 778
FHHF G CSC DYW
Sbjct: 771 FHHFKNGLCSCRDYW 785
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 223/507 (43%), Gaps = 107/507 (21%)
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
RI L N L+ Y + G I +A +F+ V SWN ++ G+ K RL +
Sbjct: 38 RIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEE 97
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWT-------- 282
A +F+ MP D VSW MI GY Q A +F E DV FT T
Sbjct: 98 AHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAA 157
Query: 283 ---------------------------AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
++++ Y ++G A+++FD M K+T SWN M
Sbjct: 158 VECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTM 217
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
I+ ++Q+ +D+A+ FE M ++V SWN MI+GY Q G A ++F +M
Sbjct: 218 ISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKM--------- 268
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+ + ++ S LS CANL +L+LGKQ+H +++
Sbjct: 269 ---------------------LMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRT 307
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYH-------------AFEEIVD------------- 469
F+ VGNAL+ MY K G VE A AF ++D
Sbjct: 308 EFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARR 367
Query: 470 -------KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
+DV++W MI GY ++GF +DA+ LF SM G KP++ T+ +LS S
Sbjct: 368 IFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLAS 427
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
++ G + S R G + ++ + ++G +++A+ + + ++ D TW +++
Sbjct: 428 LDHGRQIHASATRS-GNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMI 486
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENA 609
A +G L E+A +FE EN
Sbjct: 487 IALAQHG---LGEEAL-TLFERMLENG 509
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 238/524 (45%), Gaps = 106/524 (20%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF----- 115
+ WN+ ++ + + G + A VF MP SVS+ AMI GY GQ + A +F
Sbjct: 79 VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138
Query: 116 DQMPQRDLVSWNVMIS--------------GYVRNKSLSA-------------------- 141
D +P NV+ S +V LS+
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
A+ +F+ M + SWNTM+S + Q+G D A+ F++M+E++ +SWN +++ Y Q+G
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFD 258
Query: 202 EEAC-----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW-----N 251
EA ML +S + + + S + + L K I + +R E N
Sbjct: 259 REALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHI-IRTEFDTFGAVGN 317
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVK--DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
+I+ Y+++ + AQ++ E++ + DV +TA++ GYV+ G ++ AR IFD++ ++
Sbjct: 318 ALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDV 377
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAM---------------------------------- 335
V+W AMI GYVQ A ELF +M
Sbjct: 378 VAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHAS 437
Query: 336 -----TCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSED 389
+V+ N +IT YA+SG I AR +F+ + + D I+W ++I AQ G E+
Sbjct: 438 ATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEE 497
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG------QLVKVGFEAGCFV 443
+L LF M G + + + VLS C ++ +E G+ + +++ C +
Sbjct: 498 ALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMI 557
Query: 444 GNALLVMYCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGYARH 485
++ + G ++EA HAF E ++ DVI+W +++A H
Sbjct: 558 D-----LFGRAGLLQEA-HAFIENMPIEPDVIAWGSLLASCKVH 595
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 182/465 (39%), Gaps = 132/465 (28%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANT-----NPYPSKKTLKR-HLNSKSRNKPKPAGDWDI 61
R++HS + H + I+ S N +P +K R L S S
Sbjct: 165 RKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTS------------ 212
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--- 118
WN I++HM++G D A F M R VS+NAMISGY +G A +F +M
Sbjct: 213 -SWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271
Query: 119 ----PQRDLVS---------------------------------WNVMISGYVRNKSLSA 141
P + ++ N +IS Y ++ +
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331
Query: 142 ARNLFE--MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
A+ + E M+ DV+++ +L GY + G + ARRIFD + ++ ++W ++ YVQNG
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391
Query: 200 RIEEACMLFES--------------------------------------KANWEVVSW-N 220
++A LF S N VS N
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSN 451
Query: 221 SLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMITGYAQNNYLAEAQRLFE---EAPVK 276
+L+ + K + DA+W+F+ + RD ++W +MI AQ+ EA LFE E +K
Sbjct: 452 ALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIK 511
Query: 277 -DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
D T+ ++S G V++ R ++ M + +
Sbjct: 512 PDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKI------------------------- 546
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIA 379
+ + MI + ++G + A + MP + D I+W +++A
Sbjct: 547 -IPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLA 590
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
P+TS L GK +H +++K G G F+ N L+ Y K G + +A+ F+E+
Sbjct: 15 PYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEM 74
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
K V SWN +++GYA+ G ++A +FE M +PD ++ ++ + G E
Sbjct: 75 PVKSVFSWNIILSGYAKGGRLEEAHRVFEEMP----EPDSVSWTAMIVGYNQMGQFENAI 130
Query: 528 EYFYSMNRD 536
F M D
Sbjct: 131 GMFREMVSD 139
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/594 (44%), Positives = 386/594 (64%), Gaps = 1/594 (0%)
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK-QKRLGDAKWIFDRMPV 244
+S N +A++V+ +E A +FE + V+WN+++ G+ K ++ +A +FD++P
Sbjct: 74 VSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE 133
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
D VS+N M+ Y ++ + A F + PVKD+ +W ++SG+ QNG++ +A +F M
Sbjct: 134 PDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM 193
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
PEKN VSW+AMI+GYV+ ++ A EL++ + K+V M+TGY + G++ A +F
Sbjct: 194 PEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQ 253
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
RM + ++W ++IAGY ++ +ED L++F M R N +SVL C+NL++L L
Sbjct: 254 RMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPL 313
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G+Q+H + K +L+ MYCKCG ++ A+ F E+ KDVI+WN MI+GYA+
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQ 373
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HG G+ AL LF+ M+ +KPD IT V ++ AC+H G V+ G +YF SM +++G+
Sbjct: 374 HGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPV 433
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HYTC++DLLGRAGRLDEA +L+K MPF P AA +G LLGACR++ +LAE AA + +
Sbjct: 434 HYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNL 493
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
+P +A YV L+N+YAA+ +W V+KVR M++ V K+ GYSW+E+++ H F D L
Sbjct: 494 DPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRL 553
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
HPE I+ L EL+ K+K G+V + LHDV EE KE +L +HSEKLA+A+G++
Sbjct: 554 HPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTA 613
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIRV KNLRVC DCH AIK IS I R II+RD RFHHF G CSCGDYW
Sbjct: 614 PGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 204/409 (49%), Gaps = 76/409 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL-LNGQLDPARQVFDQM 118
D+ N I + +R +SA +VF M R++V++N M+SGY + G++ A ++FD++
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P+ D VS+N+M+ Y+R+ + AA F MP +D+ SWNT++SG+AQNG A +F
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
M EKN +SW+ +++ YV++G +E A L+++ VV +++ G++K ++ A+ I
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE--------------------------- 271
F RM V++ V+WN+MI GY +N + ++F+
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 272 -----------EAPV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
++P+ KD T+++S Y + G +D A +F MP K+ ++WNAMI+G
Sbjct: 312 PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISG- 370
Query: 320 VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWA 375
YAQ G A +LFD+M + D I++
Sbjct: 371 ------------------------------YAQHGAGRKALHLFDKMRNGTMKPDWITFV 400
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKR-YGERLNRSPFTSVLSTCANLASLE 423
A+I +G+ + ++ F MK+ +G +T V+ L+
Sbjct: 401 AVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLD 449
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 79/320 (24%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARN--------------------------------LF 363
T +V S N I + ++ ++ ARN LF
Sbjct: 69 TASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF 128
Query: 364 DRMPQHDCI-------------------------------SWAAIIAGYAQSGYSEDSLR 392
D++P+ D + SW +I+G+AQ+G + +
Sbjct: 129 DKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFD 188
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF M N +++++S LE ++L+ VG ++ V A+L Y
Sbjct: 189 LFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELYKN---VGMKS-VVVETAMLTGYM 240
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
K G VE A F+ + K++++WN+MIAGY + +D L +F++M ++P+ +++
Sbjct: 241 KFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG---RAGRLDEAQNLMKNM 569
+L CS+ + G + M++ P SK T L+ + G LD A L M
Sbjct: 301 VLLGCSNLSALPLGRQ----MHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEM 356
Query: 570 PFEPDAATWGALLGACRLYG 589
P D TW A++ +G
Sbjct: 357 P-RKDVITWNAMISGYAQHG 375
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 284/710 (40%), Positives = 417/710 (58%), Gaps = 66/710 (9%)
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
+N +I+ Y + L ARN+F+ +P+ ++ SWNT+LS Y++ GY +R+FD M +
Sbjct: 43 YNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDV 102
Query: 186 ISWNGLLAAYVQNGRIEEAC-----MLFESKANWEVVSWNSLM-----GGFVKQKR---- 231
+SWN LL+ Y NG I E+ ML + N +++++++ GFV R
Sbjct: 103 VSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHG 162
Query: 232 ----LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
G ++F P+ D YA+ ++ +A R+FEE P K++ + M++G
Sbjct: 163 QIFKFGYQSYLFVGSPLVDM---------YAKTGFINDANRIFEEIPEKNIVVYNTMITG 213
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASW 343
++ + EA +FD MPEK+++SW +I G Q A + F+ M C + ++
Sbjct: 214 LLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTF 273
Query: 344 NTMITG-----------------------------------YAQSGEITHARNLFDRMPQ 368
+++T Y + + +A +F +M
Sbjct: 274 GSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRH 333
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ ISW A++ GY Q+GYSE+++R+F +M+R + SV+S+CANLASLE G Q
Sbjct: 334 KNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQF 393
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
HGQ + G V NAL+ +Y KCGS+E A+ F E+ +D +SW +++GYA+ G
Sbjct: 394 HGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKA 453
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+ + LFE+M GI PD +T VG+LSACS GLVEKG YF M +++ + P HYTC
Sbjct: 454 NETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTC 513
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
M+DLL RAGRL+EA+N + MPF PDA W LL +CRL G E+ + AAE + ++EP+N
Sbjct: 514 MIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQN 573
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
Y+LLS++YAA G+W DV+K+R MR+ GVKK G+SW++ +NKVH FS D P
Sbjct: 574 PASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFS 633
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
D+IYA LE L K+ ++G+V VLHDV + EK ML +HSEKLA+A+G+L IP G
Sbjct: 634 DQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQ 693
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IRV+KNLRVC DCHNA K+IS+I R I++RD RFH F G CSCGD+W
Sbjct: 694 IRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+T+ L C + K+LH ++++ F+ N L+ Y K G ++ A + F+ I
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++ SWNT+++ Y++ G+ +D +F+SM D ++ +LS + GL+ +
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPN----HDVVSWNSLLSGYAGNGLISESVR 123
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA--CR 586
+ M +D V N ++ M+ L G +D + + + F+ ++ +G+
Sbjct: 124 VYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQI-FKFGYQSY-LFVGSPLVD 181
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMY 612
+Y KT A + E+ +N +Y
Sbjct: 182 MYAKTGFINDANRIFEEIPEKNIVVY 207
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/720 (37%), Positives = 426/720 (59%), Gaps = 40/720 (5%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN I ++G +A +F MPR SS S+N+MI+GY +G L A +FD+ P
Sbjct: 24 NVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMITGYAQSGDLAGATAMFDRTP 83
Query: 120 QRDLVSWNVMISGYVRNKSLSAARN-LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
+ +++SWN +I+GY N+ + A+ +F+ MP+R+ VSWN +LS YAQ G+ AR F+
Sbjct: 84 EHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEVSWNALLSAYAQAGHVHLARSTFE 143
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
RM + ++W L+A QNG++EEA +L++ ++V+W +L+ + +L ++K +
Sbjct: 144 RMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGQLTESKRV 203
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
+ MP R+ VS MI Y+QN + +A+++ + P D T T+M+ Y QNG + +AR
Sbjct: 204 YALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAR 263
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
+FD++ + ++ NAM+ Y + +D A+ +F+++ K + SWNTM+ YAQ+G +
Sbjct: 264 EMFDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDE 323
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A+++FD +P + +S ++ YA + ++ R+F M
Sbjct: 324 AKSIFDSIPHKNVVSHNVMVVAYAHNMDLAEARRIFYSMD-------------------- 363
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
E A++ M + G + EA F ++ ++V+SWN++
Sbjct: 364 -------------------EKDTVTWTAMVAMLAQHGRLAEAQELFAKMPYRNVVSWNSL 404
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
IAG A G G A+ M+ G KPD IT +GIL ACSH GLVE+G +F SM D+G
Sbjct: 405 IAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEGWTHFTSMQGDHG 464
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+IP +HY MVD+LGRAG+L A+ L++ MPF PD WG+LLG+C+ + +L +AA
Sbjct: 465 LIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAA 524
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
E + + + +++G YVLL+N+Y++ GR D VR +M+ RGVKK G S + V +H F
Sbjct: 525 ESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGVSLIRVDGVLHRF 584
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
G+ HP I + L L+ +K+ G+ TK VLH V +EEKE +L YHSEKLA+A+
Sbjct: 585 VAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSVLDEEKEVLLSYHSEKLAIAF 644
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++ G PIR+MKNLRVC DCH A K +SK++ R II+RD RFH+F G+CSCGDYW
Sbjct: 645 ASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVRDGYRFHNFENGTCSCGDYW 704
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 266/521 (51%), Gaps = 24/521 (4%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV-FDQ 117
W WN IT + ++G A +F+ P + +S+NA+I+GY N + A+ V FD+
Sbjct: 54 WSSSSWNSMITGYAQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDE 113
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+R+ VSWN ++S Y + + AR+ FE MP+ DVV+W +++ QNG + A ++
Sbjct: 114 MPRREEVSWNALLSAYAQAGHVHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLY 173
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
D + E++ ++W L+ AY NG++ E+ ++ VS +++ + + + A+
Sbjct: 174 DLIPERDLVAWTALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARK 233
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+ D +P D+ + +MI YAQN Y+ +A+ +F+ DV AM+ Y +D A
Sbjct: 234 MLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEAYSSAQMLDHA 293
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ +FD++ +K VSWN M+A Y Q +D A+ +F+++ KNV S N M+ YA + ++
Sbjct: 294 KAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMVVAYAHNMDLA 353
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR +F M + D ++W A++A AQ G ++ LF +M Y ++ + + +++C
Sbjct: 354 EARRIFYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKMP-YRNVVSWNSLIAGMASCG 412
Query: 418 N-LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKDVISW 475
+ +A++ + + K + F+G +L+ G VEE + F + D +I W
Sbjct: 413 HGMAAVRYLYVMRNEGAKP--DHITFMG--ILIACSHVGLVEEGWTHFTSMQGDHGLIPW 468
Query: 476 NT----MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
M+ R G A L E+M + PD +L +C V+ GT
Sbjct: 469 REHYCRMVDVLGRAGQLGAARELLETMPFI---PDVGAWGSLLGSCKTHSDVKLGTRAAE 525
Query: 532 SMNR--DYGVIPNSKHYTCMVDLLGRAGRLDEA---QNLMK 567
S+ + D P Y + ++ GR+ +A +N MK
Sbjct: 526 SLLQFDDQSSGP----YVLLANMYSSVGRVADALAVRNRMK 562
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 213/420 (50%), Gaps = 42/420 (10%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
+ Y +NG + A +F+ + VVSWNSL+ GF + + +A IF RMP SWN
Sbjct: 1 MQVYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWN 60
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR-MIFDAMPEKNTV 310
+MITGYAQ+ LA A +F+ P +V +W A+++GY N + EA+ +IFD MP + V
Sbjct: 61 SMITGYAQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEV 120
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
SWNA+++ Y Q + +AR FE M +V +W +I Q+G++ A L+D +P+ D
Sbjct: 121 SWNALLSAYAQAGHVHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERD 180
Query: 371 CISWAAIIAGYAQSGYSEDSLRLF---------------IEMKRYGERL----------- 404
++W A+I Y +G +S R++ I + GE +
Sbjct: 181 LVAWTALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPD 240
Query: 405 -NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
++S TS++ A ++ +++ + A C NA++ Y ++ A
Sbjct: 241 PDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIA-C---NAMMEAYSSAQMLDHAKAM 296
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+ I K ++SWNTM+A YA+ G +A +F+S+ + ++ +V A +H +
Sbjct: 297 FDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMVV----AYAHNMDL 352
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+ FYSM+ V +T MV +L + GRL EAQ L MP+ + +W +L+
Sbjct: 353 AEARRIFYSMDEKDTVT-----WTAMVAMLAQHGRLAEAQELFAKMPYR-NVVSWNSLIA 406
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 293/825 (35%), Positives = 457/825 (55%), Gaps = 68/825 (8%)
Query: 10 LHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAIT 69
L SC H ++ L SP KRH + K D + ++N +
Sbjct: 3 LIKSCTRKTHLHNLGTLTSP------------KRHFQHVDASMIKTGFDPNTCRFNFQVQ 50
Query: 70 THMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVM 129
TH++ G +A +F+ MP ++ +S N MI GYL +G L AR +FD M QR +V+W ++
Sbjct: 51 THLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTML 110
Query: 130 ISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQ----NGYADAARRIFDRML 181
I GY ++ A NLF M + D ++ T+LSG+ + N A +
Sbjct: 111 IGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGY 170
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ + N LL +Y + + AC LF+ A + V++N+L+ G+ K+ DA +F +
Sbjct: 171 DSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFK 230
Query: 242 MP----------------------------------VRDEVSWNTMITG-----YAQNNY 262
M V+ WN + Y++++
Sbjct: 231 MQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDR 290
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAG 318
+ EA++LF E P D ++ +++ NG+V+E+ +F + ++ + +++
Sbjct: 291 IVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSI 350
Query: 319 YVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+ ++M R++ + S N+++ YA+ + A +F + + W
Sbjct: 351 AANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPW 410
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
A+I+GY Q G ED L+LF+EM R + + + S+L CANLASL LGKQLH ++++
Sbjct: 411 TALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIR 470
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
G + F G+AL+ MY KCGS++EA F+E+ ++ +SWN +I+ YA++G G AL
Sbjct: 471 SGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRS 530
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
FE M G++P+ ++ + IL ACSH GLVE+G +YF SM + Y + P +HY MVD+L
Sbjct: 531 FEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLC 590
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP-ENAGMYV 613
R+GR DEA+ LM MPFEPD W ++L +CR++ ELA KAA+ +F M+ +A YV
Sbjct: 591 RSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYV 650
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
+SN+YAA+G W V KV+ +R+RG++KV YSW+E++ K H FS DT HP+ I
Sbjct: 651 SMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITR 710
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L+ELE ++++ G+ + LH+V EE K L+YHSE++A+A+ ++S P G PI VMK
Sbjct: 711 KLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMK 770
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLR C DCH AIK ISKIV R I +RD++RFHHF+ GSCSC DYW
Sbjct: 771 NLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 293/746 (39%), Positives = 423/746 (56%), Gaps = 63/746 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--KRD 153
N ++ Y + L ARQ+F+++P D ++ +I+ Y +L R +F P RD
Sbjct: 52 NRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
V +N M++GYA NG +A +F M ++ ++ +L+A V E+ C
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 210 S---KANWEVVS---WNSLMGGFVKQ-KRLG-------DAKWIFDRMPVRDEVSWNTMIT 255
K VS N+L+ +VK+ LG A+ +FD MP RDE++W TMIT
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI----------FDAMP 305
GY +N+ L A+ +FE W AM+SGYV G EA + FD +
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 306 EKNTVSW---------------------------------NAMIAGYVQTKRMDMARELF 332
+S NA+I Y + ++D AR++F
Sbjct: 292 YTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
AM +N+ +WN +++GY +G + A++ F+ MP + ++ +I+G AQ+G+ ++ L+
Sbjct: 352 YAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLK 411
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF +M+ G F L+ C+ L +LE G+QLH QLV +G+E+ VGNA++ MY
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCG VE A F + D++SWN+MIA +HG G A+ LF+ M G+ PD IT +
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLT 531
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+L+ACSH GLVEKG YF SM YG+ P HY MVDL RAG A+ ++ +MP +
Sbjct: 532 VLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSK 591
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
P A W ALL CR++G +L +AAE +F++ P+N G YVLLSN+YA GRW +V+KVR
Sbjct: 592 PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVR 651
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
MRD+ V+K SW+EV+NKVH F V D +HPE +Y YLE+L ++K+ G++ TK
Sbjct: 652 KLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTK 711
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLHD+ E+KEH L HSEKLAV +GI+ +P G +RV KN+R+C DCHNA K +SK+
Sbjct: 712 FVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVA 771
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD RFHHF G CSC DYW
Sbjct: 772 RREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 216/439 (49%), Gaps = 37/439 (8%)
Query: 75 GCCDSA-----LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVM 129
GC S+ L V+ +S +AM+S AR++FD+MP+RD ++W M
Sbjct: 180 GCVSSSVLNALLSVYVKRASELGISCSAMVS----------ARKLFDEMPKRDELTWTTM 229
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNE 185
I+GYVRN L+ AR +FE M + +WN M+SGY G A + +M ++ ++
Sbjct: 230 ITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDD 289
Query: 186 ISWNGLLAAYV-----QNGRIEEACML---FESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
I++ +++A Q G+ A +L ++ + N+L+ + K ++ +A+
Sbjct: 290 ITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARK 349
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
IF MPVR+ ++WN +++GY + EA+ FEE PVK++ T T M+SG QNG DE
Sbjct: 350 IFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEG 409
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMARELFEAMTC----KNVASWNTMITG 349
+F M + AG + ++ R+L + +++ N MI+
Sbjct: 410 LKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISM 469
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA+ G + A ++F MP D +SW ++IA Q G+ ++ LF +M + G +R F
Sbjct: 470 YAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITF 529
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYCKCGSVEEAYHAFEEIV 468
+VL+ C++ +E G+ +++ C A +V ++C+ G A + +
Sbjct: 530 LTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMP 589
Query: 469 DKD-VISWNTMIAGYARHG 486
K W ++AG HG
Sbjct: 590 SKPGAPVWEALLAGCRIHG 608
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 161/369 (43%), Gaps = 60/369 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D W IT ++RN + A VF +M ++NAMISGY+ G A + +M
Sbjct: 222 DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMR 281
Query: 120 ----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV---------VSWNTMLSGYAQ 166
Q D +++ +IS S + + + K ++ VS N +++ Y +
Sbjct: 282 FLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVS-NALITLYCK 340
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
N D AR+IF M +N I+WN +L+ YV GR+EE
Sbjct: 341 NNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE----------------------- 377
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFT 280
AK F+ MPV++ ++ MI+G AQN + E +LF++ P F
Sbjct: 378 --------AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFA 429
Query: 281 ---WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
V G ++NG+ A+++ +V NAMI+ Y + ++ A +F M
Sbjct: 430 GALTACSVLGALENGRQLHAQLVHLGYESSLSVG-NAMISMYAKCGVVEAAESVFVTMPS 488
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRL 393
++ SWN+MI Q G A LFD+M + D I++ ++ + +G E
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHY 548
Query: 394 FIEM-KRYG 401
F M + YG
Sbjct: 549 FNSMLESYG 557
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 61/347 (17%)
Query: 50 RNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLD 109
+N+ P + + N IT + +N D A +F +MP R+ +++NA++SGY+ G+++
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRME 376
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
A+ F++MP ++L++ VMI SG AQNG+
Sbjct: 377 EAKSFFEEMPVKNLLTLTVMI-------------------------------SGLAQNGF 405
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEEACML---FESKANWEVV 217
D ++F +M E + ++ G L A ++NGR A ++ +ES +
Sbjct: 406 GDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLS---- 461
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
N+++ + K + A+ +F MP D VSWN+MI Q+ + +A LF++ +
Sbjct: 462 VGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEG 521
Query: 278 VF----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMA 328
VF T+ +++ G V++ R F++M E ++ + M+ + + A
Sbjct: 522 VFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYA 581
Query: 329 RELFEAMTCKNVAS-WNTMITGYAQSGE----ITHARNLFDRMPQHD 370
R + ++M K A W ++ G G I A LF MPQ+D
Sbjct: 582 RIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQND 628
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 130/332 (39%), Gaps = 77/332 (23%)
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++L + + RY E+L L + + AS L + +H ++ GF+ N LL
Sbjct: 3 NALDIRLLANRYAEKLQ-------LCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLL 55
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVIS---------------------------------W 475
MYCK ++ A FEEI + D I+ +
Sbjct: 56 EMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFY 115
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA----------CS--HTGLV 523
N MI GYA +G G AL LF +M+ +PDD T +LSA C H +V
Sbjct: 116 NAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVV 175
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD-------EAQNLMKNMPFEPDAA 576
+ G G + +S + + RA L A+ L MP + D
Sbjct: 176 KTGM----------GCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMP-KRDEL 224
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAG-MYVLLSNLYAASGRWGDVSKVRLKM 635
TW ++ Y + + A EV FE EN G + + + Y G + + + KM
Sbjct: 225 TWTTMITG---YVRNDDLNGAREV-FEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKM 280
Query: 636 RDRGVK--KVTGYSWLEVQNKVHTFSVGDTLH 665
R G++ +T + + V +F +G +H
Sbjct: 281 RFLGIQFDDITYTTIISACANVGSFQMGKQVH 312
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 292/718 (40%), Positives = 407/718 (56%), Gaps = 94/718 (13%)
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY-----VQNGR- 200
+ + V W + GY +NG+ + A R++ +M + +++ + ++ A +Q GR
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 201 IEEACML--FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
+ E + FES +V+ +L + K L +A+ +FDRMP RD VSWN +I GY+
Sbjct: 142 VHEDIIARGFES----DVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYS 197
Query: 259 QNNYLAEAQRLFEEAPV---------------------------------------KDVF 279
QN EA LF E V DV
Sbjct: 198 QNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVL 257
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+V+ Y + G V+ A +F+ MP ++ SWNA+I GY + A F M +
Sbjct: 258 VVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG 317
Query: 340 VAS---------------------------------------WNTMITGYAQSGEITHAR 360
+ N ++ YA+ G + A
Sbjct: 318 IKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAY 377
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LF+RMP+ + ++W AII+GY+Q G+ ++L LFIEM+ G + + SVL CA+
Sbjct: 378 KLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFL 437
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+LE GKQ+HG ++ GFE+ VG L+ +Y KCG+V A FE + ++DV+SW TMI
Sbjct: 438 ALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMIL 497
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
Y HG G+DAL LF M+ G K D I IL+ACSH GLV++G +YF M DYG+
Sbjct: 498 AYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLA 557
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P +HY C+VDLLGRAG LDEA ++KNM EPDA WGALLGACR++ EL E+AA+
Sbjct: 558 PKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKH 617
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+FE++P+NAG YVLLSN+YA + RW DV+K+R M+++GVKK G S + V V TF V
Sbjct: 618 LFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLV 677
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HP+ ++IYA LE L ++++ G+V +T L L DV EE KE++L HSEKLA+++GI
Sbjct: 678 GDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGI 737
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++ G PIR+MKNLRVC DCHNA K ISKIVGR II+RD NRFHH G CSCGDYW
Sbjct: 738 INTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 184/352 (52%), Gaps = 18/352 (5%)
Query: 267 QRLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGY 319
Q F + +++ W + GYV+NG ++A ++ M P+K + + ++I
Sbjct: 73 QTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDK--LVFLSVIKAC 130
Query: 320 VQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
+ R++ E + + +V + + Y + G + +AR +FDRMP+ D +SW
Sbjct: 131 GSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWN 190
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
AIIAGY+Q+G ++L LF EM+ G + N S SV+ CA+L +LE GKQ+H ++
Sbjct: 191 AIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS 250
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G E+ V N L+ MY KCG+V A+ FE + +DV SWN +I GY+ + +AL F
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFF 310
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
M+ GIKP+ ITMV +L AC+H +E+G + R G N +V++ +
Sbjct: 311 NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVGNALVNMYAK 369
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
G ++ A L + MP + + W A++ +G +A + EM+ +
Sbjct: 370 CGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHGH---PHEALALFIEMQAQ 417
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 161/679 (23%), Positives = 276/679 (40%), Gaps = 145/679 (21%)
Query: 60 DIRQ----WNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPA 111
DIR W I +++NG + AL ++ M R + + ++I L
Sbjct: 80 DIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAG 139
Query: 112 RQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
R+V + + R D++ + S Y + SL AR +F+ MPKRDVVSWN +++GY+QN
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199
Query: 168 GYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSW 219
G A +F M ++ N + ++ +E+ C S +V+
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV- 278
N L+ + K + A +F+RMP+RD SWN +I GY+ N+ EA F V+ +
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319
Query: 279 --------------------------------------FTWTAMVSGYVQNGKVDEARMI 300
A+V+ Y + G V+ A +
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKL 379
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK---------------------- 338
F+ MP+KN V+WNA+I+GY Q A LF M +
Sbjct: 380 FERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439
Query: 339 -----------------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
NV ++ YA+ G + A+ LF+RMP+ D +SW +I Y
Sbjct: 440 EQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAY 499
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
G+ ED+L LF +M+ G +L+ FT++L+ C++ ++ G Q + Q +K +
Sbjct: 500 GIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-YFQCMKSDY---- 554
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
G A + + C +VD + G A H + + +K +
Sbjct: 555 --GLAPKLEHYAC------------LVD---------LLGRAGHLDEANGI-----IKNM 586
Query: 502 GIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
++PD +L AC + L E+ ++ + ++ D N+ +Y + ++ A R
Sbjct: 587 SLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPD-----NAGYYVLLSNIYAEAQR 641
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
++ L K M + G + A +T L P++ +Y +L L
Sbjct: 642 WEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGD------RTHPQSEQIYAMLEIL 695
Query: 619 YAASGRWGDVSKVRLKMRD 637
Y + G V L ++D
Sbjct: 696 YEQMRKAGYVPNTNLALQD 714
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 293/781 (37%), Positives = 439/781 (56%), Gaps = 78/781 (9%)
Query: 74 NGCCDSAL-----------HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
N CC L HV S + N +I Y + AR++FD++PQ D
Sbjct: 19 NLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPD 78
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMP--KRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+++ +I+ Y +L AR +F P RD V +N M++GY+ +A +F M
Sbjct: 79 VIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAM 138
Query: 181 ----LEKNEISWNGLLAAYV-------QNGRIEEACMLFESKANWEVVSWNSLMGGFVK- 228
+ ++ ++ +L+A Q G++ + F + V+ N+L+ +VK
Sbjct: 139 RWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVL--NALLSVYVKC 196
Query: 229 --------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+ A+ +FD MP R+E W T+ITGY +N L A+ + + +
Sbjct: 197 ASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIA 256
Query: 281 WTAMVSGYVQNGKVDEARMIFDAM------------------------------------ 304
W AM+SGY+ +G ++A +F M
Sbjct: 257 WNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYIL 316
Query: 305 -----PEKNTV--SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
P+++ + N +I Y + ++D AR++F M K++ +WNT+++GY +G +
Sbjct: 317 KNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRME 376
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A++ F +MP+ + ++W +I+G AQ+G+ E +L+LF +MK G N F ++ C+
Sbjct: 377 EAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACS 436
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L +LE G+QLH Q+V +G ++ VGNA++ MY +CG VE A F + D +SWN+
Sbjct: 437 VLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNS 496
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MIA +HG G A+ L+E M GI PD T + +LSACSH GLVE+G YF SM +Y
Sbjct: 497 MIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENY 556
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ P HY M+DL RAG+ +A+N++ +MPFE A W ALL CR +G +L +A
Sbjct: 557 GIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEA 616
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE +F++ P++ G YVLLSN+YA+ GRW DV++ R MRDRGVKK SW EV+NKVH
Sbjct: 617 AEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHV 676
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F V DT+HPE IY YLE+L ++K+ G++ TK VLHD+ E KE+ L HSEKLAVA
Sbjct: 677 FLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVA 736
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G++ +P G +RV KNLR+C DCHNAIK +SK+VGR I++RD RFHHF G CSC +Y
Sbjct: 737 FGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNY 796
Query: 778 W 778
W
Sbjct: 797 W 797
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 195/446 (43%), Gaps = 86/446 (19%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----P 119
W IT ++RNG A + ++M + +++NAMISGYL +G + A +F +M
Sbjct: 226 WTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGV 285
Query: 120 QRDLVSWNVMISG------YVRNKSLSAARNLFEMMPKRDVV--SWNTMLSGYAQNGYAD 171
Q D ++ +IS ++ K + A E+ P RD + NT+++ Y + G D
Sbjct: 286 QVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVD 345
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
AR+IF M K+ I+WN LL+ YV GR+EEA
Sbjct: 346 GARKIFYEMPVKDIITWNTLLSGYVNAGRMEEA--------------------------- 378
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVS- 286
K F +MP ++ ++W MI+G AQN + +A +LF + + + + + ++
Sbjct: 379 ----KSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITA 434
Query: 287 ----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G ++NG+ A+++ +V NAMI Y + ++ AR +F M + S
Sbjct: 435 CSVLGALENGRQLHAQIVHLGHDSTLSVG-NAMITMYARCGIVEAARTMFLTMPFVDPVS 493
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN+MI A Q G+ ++ L+ +M + G
Sbjct: 494 WNSMI-------------------------------AALGQHGHGVKAIELYEQMLKEGI 522
Query: 403 RLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+R F +VLS C++ +E G + + L G G ++ ++C+ G +A
Sbjct: 523 LPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAK 582
Query: 462 HAFEEI-VDKDVISWNTMIAGYARHG 486
+ + + + W ++AG HG
Sbjct: 583 NVIDSMPFEARAPIWEALLAGCRTHG 608
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 156/335 (46%), Gaps = 37/335 (11%)
Query: 50 RNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLD 109
+N+ P D+ + N IT + + G D A +F MP + +++N ++SGY+ G+++
Sbjct: 317 KNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRME 376
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
A+ F QMP+++L++W VMISG +N A LF M L GY N Y
Sbjct: 377 EAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMK----------LDGYEPNDY 426
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
A A I+ +L A ++NGR A ++ + V N+++ + +
Sbjct: 427 AFAG-----------AITACSVLGA-LENGRQLHAQIVHLGHDSTLSVG-NAMITMYARC 473
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMV 285
+ A+ +F MP D VSWN+MI Q+ + +A L+E E + D T+ ++
Sbjct: 474 GIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVL 533
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNV 340
S G V+E F++M E ++ + MI + + + A+ + ++M +
Sbjct: 534 SACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEAR 593
Query: 341 AS-WNTMITGYAQSGE----ITHARNLFDRMPQHD 370
A W ++ G G I A LF +PQHD
Sbjct: 594 APIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD 628
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 68/177 (38%), Gaps = 52/177 (29%)
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
RY +LN L NL+S L + +HG ++ GF+ + N L+ +Y K
Sbjct: 13 RYFAQLN-------LCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFV 65
Query: 459 EAYHAFEEIVDKDVIS---------------------------------WNTMIAGYARH 485
A F+EI DVI+ +N MI GY+
Sbjct: 66 YARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHM 125
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACS------------HTGLVEKGTEYF 530
G A+ LF +M+ +PDD T +LSA + H +V+ G E F
Sbjct: 126 NDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIF 182
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/746 (39%), Positives = 422/746 (56%), Gaps = 63/746 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--KRD 153
N ++ Y + + ARQ+F+++P D ++ +I+ Y +L R +F P RD
Sbjct: 52 NRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
V +N M++GYA NG +A +F M ++ ++ +L+A V E+ C
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 210 S---KANWEVVS---WNSLMGGFVKQ-KRLG-------DAKWIFDRMPVRDEVSWNTMIT 255
K VS N+L+ +VK+ LG A+ +FD MP RDE++W TMIT
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI----------FDAMP 305
GY +N+ L A+ +FE W AM+SGYV G EA + FD +
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 306 EKNTVSW---------------------------------NAMIAGYVQTKRMDMARELF 332
+S NA+I Y + ++D AR++F
Sbjct: 292 YTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
AM +N+ +WN +++GY +G + A++ F+ MP + ++ +I+G AQ+G+ ++ L+
Sbjct: 352 YAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLK 411
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF +M+ G F L+ C+ L +LE G+QLH QLV +G+E+ VGNA++ MY
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCG VE A F + D++SWN+MIA +HG G A+ LF+ M G+ PD IT +
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLT 531
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+L+ACSH GLVEKG YF SM YG+ P HY MVDL RAG A+ ++ +MP +
Sbjct: 532 VLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSK 591
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
P A W ALL CR++G +L +AAE +F++ P+N G YVLLSN+YA GRW DV+KVR
Sbjct: 592 PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVR 651
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
MRD+ V+K SW+EV+NKVH F V D +HPE +Y YLE+L ++K+ G++ TK
Sbjct: 652 KLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTK 711
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLHD+ E+KEH L HSEKLAV +GI+ +P +RV KN+R+C DCHNA K +SK+
Sbjct: 712 FVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVA 771
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD RFHHF G CSC DYW
Sbjct: 772 RREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 212/426 (49%), Gaps = 30/426 (7%)
Query: 91 SSVSYNAMISGYLLNGQ--------LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
SS NA++S Y+ + AR++FD+MP+RD ++W MI+GYVRN L+ A
Sbjct: 183 SSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGA 242
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV-- 196
R +FE M + +WN M+SGY G A + +M ++ ++I++ +++A
Sbjct: 243 REVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANV 302
Query: 197 ---QNGRIEEACML---FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
Q G+ A +L ++ + N+L+ + K ++ +A+ IF MPVR+ ++W
Sbjct: 303 GSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITW 362
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N +++GY + EA+ FEE PVK++ T T M+SG QNG DE +F M
Sbjct: 363 NAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFE 422
Query: 311 SWNAMIAGYVQT----KRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNL 362
+ AG + ++ R+L + +++ N MI+ YA+ G + A ++
Sbjct: 423 PCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESV 482
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F MP D +SW ++IA Q G+ ++ LF +M + G +R F +VL+ C++ +
Sbjct: 483 FVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLV 542
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLV-MYCKCGSVEEAYHAFEEIVDKD-VISWNTMIA 480
E G+ +++ C A +V ++C+ G A + + K W ++A
Sbjct: 543 EKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLA 602
Query: 481 GYARHG 486
G HG
Sbjct: 603 GCRIHG 608
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 179/350 (51%), Gaps = 29/350 (8%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR--- 135
SA +F+ MP+R +++ MI+GY+ N L+ AR+VF+ M + +WN MISGYV
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269
Query: 136 -NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS------- 187
++L+ R + + + D +++ T++S A G +++ +L KNE++
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYIL-KNELNPNHSFCL 328
Query: 188 --WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
N L+ Y +N +++EA +F + +++WN+++ G+V R+ +AK F+ MPV+
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFT---WTAMVSGYVQNGKVDE 296
+ ++ MI+G AQN + E +LF++ P F V G ++NG+
Sbjct: 389 NLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLH 448
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
A+++ +V NAMI+ Y + ++ A +F M ++ SWN+MI Q G
Sbjct: 449 AQLVHLGYESSLSVG-NAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHG 507
Query: 357 THARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYG 401
A LFD+M + D I++ ++ + +G E F M + YG
Sbjct: 508 VKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYG 557
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 61/347 (17%)
Query: 50 RNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLD 109
+N+ P + + N IT + +N D A +F +MP R+ +++NA++SGY+ G+++
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRME 376
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
A+ F++MP ++L++ VMI SG AQNG+
Sbjct: 377 EAKSFFEEMPVKNLLTLTVMI-------------------------------SGLAQNGF 405
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEEACML---FESKANWEVV 217
D ++F +M E + ++ G L A ++NGR A ++ +ES +
Sbjct: 406 GDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLS---- 461
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
N+++ + K + A+ +F MP D VSWN+MI Q+ + +A LF++ +
Sbjct: 462 VGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEG 521
Query: 278 VF----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMA 328
VF T+ +++ G V++ R F++M E ++ + M+ + + A
Sbjct: 522 VFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYA 581
Query: 329 RELFEAMTCKNVAS-WNTMITGYAQSGE----ITHARNLFDRMPQHD 370
R + ++M K A W ++ G G I A LF MPQ+D
Sbjct: 582 RIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQND 628
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 130/332 (39%), Gaps = 77/332 (23%)
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++L + + RY E+L L + + AS L + +H ++ GF+ N LL
Sbjct: 3 NALDIRLLANRYAEKLQ-------LCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLL 55
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVIS---------------------------------W 475
MYCK +V A FEEI + D I+ +
Sbjct: 56 EMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFY 115
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA----------CS--HTGLV 523
N MI GYA +G G AL LF +M+ +PDD T +LSA C H +V
Sbjct: 116 NAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVV 175
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD-------EAQNLMKNMPFEPDAA 576
+ G G + +S + + RA L A+ L MP + D
Sbjct: 176 KTGM----------GCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMP-KRDEL 224
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAG-MYVLLSNLYAASGRWGDVSKVRLKM 635
TW ++ Y + + A EV FE EN G + + + Y G + + + KM
Sbjct: 225 TWTTMITG---YVRNDDLNGAREV-FEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKM 280
Query: 636 RDRGVK--KVTGYSWLEVQNKVHTFSVGDTLH 665
R G++ +T + + V +F +G +H
Sbjct: 281 RFLGIQFDDITYTTIISACANVGSFQMGKQMH 312
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/743 (38%), Positives = 433/743 (58%), Gaps = 66/743 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
A+I+ ++ G + A +VFD +P RDLV+W MI+G R+ A NLF+ M +
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN-------GLLAAYVQNGRIEEA 204
D V++ ++L + +++ RM E+ W+ +L+ Y + G +E+A
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARM---KEVGWDTEIYVGTAILSMYTKCGSMEDA 366
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYA 258
+F+ VVSW +++ GF + R+ +A F++M P R V++ +++ +
Sbjct: 367 LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR--VTFMSILGACS 424
Query: 259 QNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
+ L Q++ E D TA++S Y + G + +A +F+ + ++N V+WNA
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNA 484
Query: 315 MIAGYVQTKRMDMARELFEAM-----------------TCKN-----VASW--------- 343
MI YVQ ++ D A F+A+ CK+ + W
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG 544
Query: 344 --------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N +++ + G++ A+NLF+ MP+ D +SW IIAG+ Q G ++ + F
Sbjct: 545 LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M+ G + ++ FT +L+ CA+ +L G++LH + + F+ VG L+ MY KCG
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
S+E+A+ F ++ K+V SW +MIAGYA+HG GK+AL LF M+ G+KPD IT VG LS
Sbjct: 665 SIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALS 724
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GL+E+G +F SM +++ + P +HY CMVDL GRAG L+EA + M EPD+
Sbjct: 725 ACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS 783
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
WGALLGAC+++ ELAEKAA+ E++P + G++V+LSN+YAA+G W +V+K+R M
Sbjct: 784 RVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVM 843
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
DRGV K G SW+EV KVHTF D HP+ + I+A LE L +++Q G+V T+ VL
Sbjct: 844 LDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVL 903
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HDV + EKE L YHSE+LA+ YG+L P PI + KNLRVC DCH A K ISKI R
Sbjct: 904 HDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQ 963
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
II RD+NRFHHF G CSCGD+W
Sbjct: 964 IIARDSNRFHHFKDGVCSCGDFW 986
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/665 (24%), Positives = 305/665 (45%), Gaps = 132/665 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV--- 124
+TT C VF + + + NA+++ GQ + A QV +++ +
Sbjct: 53 LTTSFSGRCPKGRCVVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYR 110
Query: 125 -SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDR 179
+++ ++ ++ K+L ++ + K D+ NT+++ YA+ G +A++IFD
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDD 170
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFES----------------------------- 210
M EK+ SWN LL YVQ+G EEA L E
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 211 --------KANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
KA W ++ +L+ +K +GDA +FD +P RD V+W +MITG A++
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290
Query: 261 NYLAEAQRLF---EEAPVK------------------------------------DVFTW 281
+A LF EE V+ +++
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------ 335
TA++S Y + G +++A +FD + +N VSW AMIAG+ Q R+D A F M
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Query: 336 -----------TCKNVASW----------------------NTMITGYAQSGEITHARNL 362
C + ++ +++ YA+ G + A +
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F+++ + + ++W A+I Y Q +++L F + + G + N S FTS+L+ C + SL
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
ELGK +H ++K G E+ V NAL+ M+ CG + A + F ++ +D++SWNT+IAG+
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGF 590
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+HG + A F+ M+ GIKPD IT G+L+AC+ + +G +++ + +
Sbjct: 591 VQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDCD 649
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
T ++ + + G +++A + +P + + +W +++ +G+ ++A E+ +
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHGR---GKEALELFY 705
Query: 603 EMEPE 607
+M+ E
Sbjct: 706 QMQQE 710
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/599 (43%), Positives = 396/599 (66%), Gaps = 10/599 (1%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDL-VSWNV-----MISGYVRNKSLSAARNLFEMMPKR 152
I G+ L ++ R +P++D V NV MI+ ++ + AR LF+ M +
Sbjct: 22 IPGFYLYHSINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREP 81
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
DV++W T++SGY + G + ARR+FDR+ +KN ++W ++ Y+++ +I +A LF
Sbjct: 82 DVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM 141
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
N VVSWN+++ G+ + R+ A ++F++MP R+ VSWNT+++ AQ + EA+RLF+
Sbjct: 142 PNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFD 201
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
P +DV +WTAM++G +NG++DEAR++FD MPE+N VSWNAMI GY Q R+D A +L
Sbjct: 202 RMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDL 261
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
FE M +++ SWNTMITG Q+G++ AR LF+ MP+ + ISW +I G Q G SE++L
Sbjct: 262 FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEAL 321
Query: 392 RLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
++F M G + N+ F SVL C+NLA L G+Q+H + K ++ FV +AL+ M
Sbjct: 322 KIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 381
Query: 451 YCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
Y KCG + A F++ +D++SWN +IA YA HG+GK+A+ F+ M+ G KPDD+
Sbjct: 382 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDV 441
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T VG+LSACSH GLVE+G +YF + +D ++ HY C+VDL GRAGRL EA ++
Sbjct: 442 TYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIER 501
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
+ +P A WGALL C ++ ++ ++AA+ + E+EPENAG Y+LLSN+YA++G+W +
Sbjct: 502 LETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREA 561
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
++VRLKM+D+G+KK G SW+EV N+VH F VGD H + IY+ L +L K+K+ G+
Sbjct: 562 ARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGY 620
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 273/509 (53%), Gaps = 59/509 (11%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ + N IT ++G A +F+ M +++ +ISGY+ G ++ AR++FD+
Sbjct: 49 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 108
Query: 118 M-PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+ ++++V+W M+ GY+R+ +S A LF MP ++VVSWNTM+ GYAQNG D+A +
Sbjct: 109 VDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYL 168
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
F++M E+N +SWN +++ Q GRIEEA LF+ +V+SW +++ G K R+ +A+
Sbjct: 169 FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEAR 228
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+FDRMP R+ VSWN MITGYAQN L EA LFE P +D+ +W M++G +QNG +
Sbjct: 229 LLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRR 288
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------------TCK 338
AR +F+ MP+KN +SW MI G VQ + A ++F M C
Sbjct: 289 ARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACS 348
Query: 339 NVASW----------------------NTMITGYAQSGEITHARNLFDR--MPQHDCISW 374
N+A + +I Y++ GE+ AR +FD Q D +SW
Sbjct: 349 NLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSW 408
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
IIA YA GY ++++ F EM++ G + + + +LS C++ +E G + +LVK
Sbjct: 409 NGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK 468
Query: 435 VGFEAGCFVGN---ALLVMYC-KCGSVEEAYHAFEEIVDK-DVISWNTMIAGYARHG--- 486
+ V A LV C + G ++EA+ E + K W ++AG H
Sbjct: 469 ---DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVK 525
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILS 515
GK A + K + ++P++ +LS
Sbjct: 526 IGKQA-----AKKLLEVEPENAGTYLLLS 549
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 290/739 (39%), Positives = 413/739 (55%), Gaps = 88/739 (11%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LE 182
N ++ YV S++ AR LF+ + VVSWN M+SGYA G A +F M LE
Sbjct: 83 NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLE 142
Query: 183 KNEISWNGLLAAYVQN-----GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
++ ++ +L+A GR ++ AN V N+L+ + K + DA+
Sbjct: 143 PDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG-NALISMYAKCGSVRDARR 201
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------------------------- 270
+FD M RDEVSW T+ YA++ Y E+ + +
Sbjct: 202 VFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAA 261
Query: 271 ------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
E DV TA+ Y++ G V +AR +F+ +P ++ ++WN MI G
Sbjct: 262 LEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGG 321
Query: 319 YVQTKRMDMARELFEAMTCKNVAS------------------------------------ 342
V + +++ A +F M + VA
Sbjct: 322 LVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSD 381
Query: 343 ---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N +I Y+++G + AR +FDRMP+ D +SW A++ GYA G +S F +M +
Sbjct: 382 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQ 441
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G N+ + VL C+N +L+ GK++H ++VK G A V NAL+ MY KCGSVE+
Sbjct: 442 QGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVED 501
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A E + +DV++WNT+I G A++G G +AL FE MK+ ++P+ T V ++SAC
Sbjct: 502 AIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRV 561
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
LVE+G F SM +DYG++P KHY CMVD+L RAG L EA++++ MPF+P AA WG
Sbjct: 562 RNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWG 621
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
ALL ACR +G E+ E+AAE ++EP+NAG YV LS +YAA+G W DV+K+R M++RG
Sbjct: 622 ALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERG 681
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
VKK G SW+EV +VH+F GD HP + IY+ LE L ++K G+V T+ V+HD+
Sbjct: 682 VKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLD 741
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
+E KE + +HSEKLA+AYG++S P PIRV KNLRVC DCH A K ISKI GR II R
Sbjct: 742 QEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIAR 801
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D +RFHHF G CSCGDYW
Sbjct: 802 DAHRFHHFKNGECSCGDYW 820
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 166/341 (48%), Gaps = 44/341 (12%)
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
NV NT++ Y G + AR LFD+ +SW +I+GYA G +++ LF M+
Sbjct: 78 NVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQ 137
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ G ++ F S+LS C++ A+L G+++H ++++ G VGNAL+ MY KCGSV
Sbjct: 138 QEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVR 197
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
+A F+ + +D +SW T+ YA G+ +++L + +M G++P IT + +LSAC
Sbjct: 198 DARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACG 257
Query: 519 HTGLVEKGTEY------------------FYSMNRDYGVIPNSKH-YTC----------- 548
+EKG + M G + +++ + C
Sbjct: 258 SLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNT 317
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFE---PDAATWGALLGACRLYG----KTELAEKAAE-- 599
M+ L +G+L+EA + M E PD T+ A+L AC G E+ +A +
Sbjct: 318 MIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDG 377
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
++ ++ NA L N+Y+ +G D +V +M R V
Sbjct: 378 LVSDVRFGNA-----LINMYSKAGSMKDARQVFDRMPKRDV 413
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 5/211 (2%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
+ + G +++ + +L +C L +GKQ+H +++ G + ++ N LL +Y CGS
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
V EA F++ +K V+SWN MI+GYA G G++A LF M+ G++PD T V ILSA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS + G E + + G+ N+ ++ + + G + +A+ + M D
Sbjct: 155 CSSPAALNWGREVHVRV-MEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA-SRDEV 212
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+W L GA Y ++ A+++ + M E
Sbjct: 213 SWTTLTGA---YAESGYAQESLKTYHAMLQE 240
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 175/431 (40%), Gaps = 64/431 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+R +++ G A VF +P R +++N MI G + +GQL+ A +F +M
Sbjct: 280 DVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRML 339
Query: 119 -----PQR---------------------------------DLVSWNVMISGYVRNKSLS 140
P R D+ N +I+ Y + S+
Sbjct: 340 KECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMK 399
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYV 196
AR +F+ MPKRDVVSW ++ GYA G + F +ML E N+I++ +L A
Sbjct: 400 DARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACS 459
Query: 197 QNGRI----EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+ E + ++ ++ N+LM + K + DA + + M RD V+WNT
Sbjct: 460 NPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNT 519
Query: 253 MITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+I G AQN EA + FE E + T+ ++S V+E R F +M +
Sbjct: 520 LIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDY 579
Query: 309 TV-----SWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEI----TH 358
+ + M+ + + A ++ M K + A W ++ G +
Sbjct: 580 GIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQA 639
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A PQ + ++ ++ YA +G D +L MK G + + P S +
Sbjct: 640 AEQCLKLEPQ-NAGTYVSLSFIYAAAGMWRDVAKLRKLMKERG--VKKEPGRSWIEVAGE 696
Query: 419 LASLELGKQLH 429
+ S G Q H
Sbjct: 697 VHSFVAGDQSH 707
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 291/734 (39%), Positives = 422/734 (57%), Gaps = 51/734 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y G AR++FD+MP R SWN ++S Y + + ++ F+ +P+RD V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSV 112
Query: 156 SWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CML 207
SW TM+ GY G A RI M+ E ++ + +LA+ +E +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFI 172
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ V NSL+ + K AK +FDRM V+D SWN MI + Q + A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAM 232
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAM--PEKNTVS--------- 311
FE+ +D+ TW +M+SGY Q G A +M+ D+M P++ T++
Sbjct: 233 AQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANL 292
Query: 312 ------------------------WNAMIAGYVQTKRMDMARELFEAMTCKN--VASWNT 345
NA+I+ Y + ++ AR L E K+ + +
Sbjct: 293 EKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ GY + G++ A+N+FD + D ++W A+I GY Q G +++ LF M +R N
Sbjct: 353 LLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPN 412
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
++LS ++LASL GKQ+HG VK G V NAL+ MY K GS+ A AF+
Sbjct: 413 SYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFD 472
Query: 466 EI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
I ++D +SW +MI A+HG ++AL LFE+M G++PD IT VG+ SAC+H GLV
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G +YF M +IP HY CMVDL GRAG L EAQ ++ MP EPD TWG+LL A
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CR+Y +L + AAE + +EPEN+G Y L+NLY+A G+W + +K+R M+D VKK
Sbjct: 593 CRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G+SW+EV++KVH F V D +HP+K+ IY ++++ ++K+ G+V T VLHD+ EE KE
Sbjct: 653 GFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKE 712
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
+LR+HSEKLA+A+G++S P +R+MKNLRVC DCH AIK ISK+VGR II+RD RF
Sbjct: 713 QILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRF 772
Query: 765 HHFSGGSCSCGDYW 778
HHF G CSC DYW
Sbjct: 773 HHFKDGFCSCRDYW 786
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 243/531 (45%), Gaps = 98/531 (18%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ + + G DS+ F+ +P+R SVS+ MI GY GQ A ++ +M + +
Sbjct: 83 WNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGI 142
Query: 124 ----VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARR 175
+ +++ + L + + + K +V N++L+ YA+ G A+
Sbjct: 143 EPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKV 202
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ------ 229
+FDRM+ K+ SWN ++A ++Q G+++ A FE A ++V+WNS++ G+ ++
Sbjct: 203 VFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRA 262
Query: 230 -----KRLGDAKWIFDRMPVRDEVS-----------------------------WNTMIT 255
K L D+ DR + +S N +I+
Sbjct: 263 LDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALIS 322
Query: 256 GYAQNNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
Y++ + A+RL E+ KD + +TA++ GY++ G ++EA+ IFD++ +++ V+W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWT 382
Query: 314 AMIAGYVQTKRMDMARELFEAMTCK----------------------------------- 338
AMI GY Q A LF +M +
Sbjct: 383 AMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS 442
Query: 339 ----NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRL 393
+V+ N +IT YA++G IT A FD + + D +SW ++I AQ G++E++L L
Sbjct: 443 GEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYC 452
F M G R + + V S C + + G+Q + V A +V ++
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 453 KCGSVEEAYHAFEEI-VDKDVISWNTMIAG---YARHGFGKDA---LMLFE 496
+ G ++EA E++ ++ DV++W ++++ Y GK A L+L E
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLE 613
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 204/440 (46%), Gaps = 53/440 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI WN I HM+ G D A+ F M R V++N+MISGY G A +F +M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKML 270
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV-------------VSWNTMLSGYAQ 166
+ ++S + V LSA NL ++ + + N ++S Y++
Sbjct: 271 RDSMLSPDRFTLASV----LSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 167 NGYADAARRIFDRMLEKN-EIS-WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
G + ARR+ ++ K+ +I + LL Y++ G + EA +F+S + +VV+W +++
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIV 386
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEA----PV 275
G+ + G+A +F M V +E N+ M++ + L +++ A +
Sbjct: 387 GYEQHGLYGEAINLFRSM-VGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEI 445
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V A+++ Y + G + A FD + E++TVSW +MI Q + A ELFE
Sbjct: 446 YSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 335 MTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQSG 385
M + + ++ + + +G + R FD M D I +A ++ + ++G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 386 YSEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKVGFE-AG 440
L E + + E++ P + S+LS C +++LGK +L+ + E +G
Sbjct: 566 -------LLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSG 618
Query: 441 CFVGNALLVMYCKCGSVEEA 460
+ +AL +Y CG EEA
Sbjct: 619 AY--SALANLYSACGKWEEA 636
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 26/302 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D I + + +++ G + A ++F+S+ R V++ AMI GY +G A +F
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRS 403
Query: 118 M---PQR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGY 169
M QR + + M+S SL + + K V N +++ YA+ G
Sbjct: 404 MVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGS 463
Query: 170 ADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESK----ANWEVVSWNSLMG 224
+A R FD + E++ +SW ++ A Q+G EEA LFE+ + +++ +
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEV-----SWNTMITGYAQNNYLAEAQRLFEEAPVK-DV 278
+ + FD M D++ + M+ + + L EAQ E+ P++ DV
Sbjct: 524 ACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDV 583
Query: 279 FTWTAMVSGY-----VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
TW +++S + GKV R++ + +N+ +++A+ Y + + A ++ +
Sbjct: 584 VTWGSLLSACRVYKNIDLGKVAAERLLL--LEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 334 AM 335
+M
Sbjct: 642 SM 643
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 287/743 (38%), Positives = 432/743 (58%), Gaps = 66/743 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
A+I+ ++ G + A +VFD +P RDLV+W MI+G R+ A NLF+ M +
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN-------GLLAAYVQNGRIEEA 204
D V++ ++L + +++ RM E+ W+ +L+ Y + G +E+A
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARM---KEVGWDTEIYVGTAILSMYTKCGSMEDA 366
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYA 258
+F+ VVSW +++ GF + R+ +A F++M P R V++ +++ +
Sbjct: 367 LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR--VTFMSILGACS 424
Query: 259 QNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
+ L Q++ E D TA++S Y + G + +A +F+ + ++N V+WNA
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNA 484
Query: 315 MIAGYVQTKRMDMARELFEAM-----------------TCKN-----VASW--------- 343
MI YVQ ++ D A F+A+ CK+ + W
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG 544
Query: 344 --------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N +++ + G++ A+NLF+ MP+ D +SW IIAG+ Q G ++ + F
Sbjct: 545 LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M+ G + ++ FT +L+ CA+ +L G++LH + + F+ VG L+ MY KCG
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
S+E+A+ F ++ K+V SW +MI GYA+HG GK+AL LF M+ G+KPD IT VG LS
Sbjct: 665 SIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALS 724
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GL+E+G +F SM +++ + P +HY CMVDL GRAG L+EA + M EPD+
Sbjct: 725 ACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS 783
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
WGALLGAC+++ ELAEKAA+ E++P + G++V+LSN+YAA+G W +V+K+R M
Sbjct: 784 RVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVM 843
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
DRGV K G SW+EV KVHTF D HP+ + I+A LE L +++Q G+V T+ VL
Sbjct: 844 LDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVL 903
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HDV + EKE L YHSE+LA+ YG+L P PI + KNLRVC DCH A K ISKI R
Sbjct: 904 HDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQ 963
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
II RD+NRFHHF G CSCGD+W
Sbjct: 964 IIARDSNRFHHFKDGVCSCGDFW 986
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 167/665 (25%), Positives = 306/665 (46%), Gaps = 132/665 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV--- 124
+TT C VF + + + NA+++ GQ + A QV +++ +
Sbjct: 53 LTTSFSGRCPKGRCVVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYR 110
Query: 125 -SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDR 179
+++ ++ ++ K+L ++ + K D+ WNT+++ YA+ G +A++IFD
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDD 170
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFES----------------------------- 210
M EK+ SWN LL YVQ+G EEA L E
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 211 --------KANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
KA W ++ +L+ +K +GDA +FD +P RD V+W +MITG A++
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290
Query: 261 NYLAEAQRLF---EEAPVK------------------------------------DVFTW 281
+A LF EE V+ +++
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------ 335
TA++S Y + G +++A +FD + +N VSW AMIAG+ Q R+D A F M
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Query: 336 -----------TCKNVASW----------------------NTMITGYAQSGEITHARNL 362
C + ++ +++ YA+ G + A +
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F+++ + + ++W A+I Y Q +++L F + + G + N S FTS+L+ C + SL
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
ELGK +H ++K G E+ V NAL+ M+ CG + A + F ++ +D++SWNT+IAG+
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGF 590
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+HG + A F+ M+ GIKPD IT G+L+AC+ + +G +++ + +
Sbjct: 591 VQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDCD 649
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
T ++ + + G +++A + +P + + +W +++ +G+ ++A E+ +
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHGR---GKEALELFY 705
Query: 603 EMEPE 607
+M+ E
Sbjct: 706 QMQQE 710
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 285/734 (38%), Positives = 426/734 (58%), Gaps = 51/734 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y G A +F++MP + SWN ++SGY + L A +F+++P RD V
Sbjct: 14 NNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSV 73
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGR--IEEACMLFE 209
SW T++ GY Q G + A +IF M++ + + +LA+ G I + F
Sbjct: 74 SWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFV 133
Query: 210 SKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
K V NSL+ + K L AK +FDRM +R+ SWN MI+ + + A
Sbjct: 134 VKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLAL 193
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS--------- 311
FE +D+ +W +M++G Q+G +EA F ++ P++ +++
Sbjct: 194 AQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANL 253
Query: 312 ------------------------WNAMIAGYVQTKRMDMARELFE--AMTCKNVASWNT 345
NA+I+ Y ++ +++AR + E ++ +V ++
Sbjct: 254 EKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTA 313
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ GY + G+IT AR +F+ + D ++W A+I GY Q+G + D++ +F M G R N
Sbjct: 314 LLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPN 373
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
++LS +++ SL GKQ+H ++ G VGNAL MY K GS+ A F
Sbjct: 374 SFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFN 433
Query: 466 EI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ ++D +SW +MI A+HG G++A+ LFE M T+GIKPD IT VG+LSAC+H GLVE
Sbjct: 434 LLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVE 493
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G YF M + + P HY CMVDL GRAG L EA ++NMP EPD WG+LL +
Sbjct: 494 QGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSS 553
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C++Y +LA+ AAE + +EP N+G Y L+N+Y++ G+W D +K+R M+ RGVKK
Sbjct: 554 CKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQ 613
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW+++QNK H F V D LHP+KD IY ++++ ++K+ GF T+ VLHD+ E K+
Sbjct: 614 GLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKD 673
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
+LRYHSEKLA+A+GI+S P +R+MKNLRVC DCHNAIK ISK+V R II+RD RF
Sbjct: 674 QILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRF 733
Query: 765 HHFSGGSCSCGDYW 778
HHF GSCSC DYW
Sbjct: 734 HHFKDGSCSCKDYW 747
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 217/465 (46%), Gaps = 77/465 (16%)
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ V N+LM + K DA +F+ MPV+ SWNT+++GYA+ L +A ++F+
Sbjct: 7 TFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDL 66
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIF------DAMPEKNTVS--------------- 311
PV+D +WT ++ GY Q G+ ++A IF +P + T++
Sbjct: 67 IPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIG 126
Query: 312 ------------------WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
N+++ Y +T + MA+ +F+ M +N +SWN MI+ +
Sbjct: 127 KKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNC 186
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE-MKRYGERLNRSPFTSV 412
G + A F+ + + D +SW ++IAG Q G+ ++L+ F +K + +R S
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASA 246
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE-------------- 458
LS CANL L GKQ+HG +V+ F+A VGNAL+ MY K G VE
Sbjct: 247 LSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL 306
Query: 459 -------------------EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
A F + D DV++W MI GY ++G DA+ +F++M
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
+ G +P+ T+ +LSA S + G + S R + S + + +AG +
Sbjct: 367 SEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVG-NALTTMYAKAGSI 425
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ A+ + + D +W +++ A +G L E+A E+ +M
Sbjct: 426 NGARKVFNLLRQNRDTVSWTSMIMALAQHG---LGEEAIELFEQM 467
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 235/509 (46%), Gaps = 92/509 (18%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ + + G + A VF+ +P R SVS+ +I GY G+ + A ++F M + +
Sbjct: 44 WNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKV 103
Query: 124 VSWNVMISGYVRNKSLSAARNL--------FEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ ++ + + + + +R + ++ V N++L+ YA+ G A+
Sbjct: 104 LPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKV 163
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+FDRM +N SWN +++ ++ GR++ A FE + ++VSWNS++ G + +A
Sbjct: 164 VFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEA 223
Query: 236 KWIF-----------DRMPVRDEVS-----------------------------WNTMIT 255
F DR + +S N +I+
Sbjct: 224 LQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALIS 283
Query: 256 GYAQNNYLAEAQRLFEEAPVK--DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
YA++ + A+R+ E++ + DV +TA+++GYV+ G + AR IF+++ + + V+W
Sbjct: 284 MYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWT 343
Query: 314 AMIAGYVQTKRMDMARELFEAMTCK-----------------NVASW------------- 343
AMI GYVQ + A E+F+ M + +V S
Sbjct: 344 AMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRS 403
Query: 344 ---------NTMITGYAQSGEITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRL 393
N + T YA++G I AR +F+ + Q+ D +SW ++I AQ G E+++ L
Sbjct: 404 GEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIEL 463
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYC 452
F +M G + + + VLS C + +E G+ + V A +V ++
Sbjct: 464 FEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFG 523
Query: 453 KCGSVEEAYHAFEEI-VDKDVISWNTMIA 480
+ G ++EAY E + ++ DVI+W ++++
Sbjct: 524 RAGLLQEAYKFVENMPMEPDVIAWGSLLS 552
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 179/409 (43%), Gaps = 66/409 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM-------PRRSSVSY----------------- 95
DI WN I ++G + AL F+S+ P R S++
Sbjct: 203 DIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQI 262
Query: 96 ----------------NAMISGYLLNGQLDPARQVFDQ--MPQRDLVSWNVMISGYVRNK 137
NA+IS Y +G ++ AR++ +Q + D++++ +++GYV+
Sbjct: 263 HGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLG 322
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLA 193
++ AR +F + DVV+W M+ GY QNG + A +F M+ + N + +L+
Sbjct: 323 DITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLS 382
Query: 194 A-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-PVRDE 247
A + +G+ A + +A V N+L + K + A+ +F+ + RD
Sbjct: 383 ASSSVTSLNHGKQIHASAIRSGEALSPSVG-NALTTMYAKAGSINGARKVFNLLRQNRDT 441
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDA 303
VSW +MI AQ+ EA LFE+ D T+ ++S G V++ R FD
Sbjct: 442 VSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDL 501
Query: 304 MPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEIT 357
M + + + M+ + + + A + E M + +V +W ++++ +
Sbjct: 502 MKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVD 561
Query: 358 HARNLFDRM---PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
A+ +R+ ++ +++A+ Y+ G +D+ ++ MK G +
Sbjct: 562 LAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVK 610
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 153/347 (44%), Gaps = 43/347 (12%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + + +++ G A +FNS+ V++ AMI GY+ NG + A +VF
Sbjct: 305 DLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKT 364
Query: 118 M----PQRDLVSWNVMISGYVRNKSL--------SAARNLFEMMPKRDVVSWNTMLSGYA 165
M P+ + + M+S SL SA R+ + P N + + YA
Sbjct: 365 MVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVG----NALTTMYA 420
Query: 166 QNGYADAARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWN 220
+ G + AR++F+ + + ++ +SW ++ A Q+G EEA LFE + +++
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYV 480
Query: 221 SLM-----GGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLF 270
++ GG V+Q R FD M ++ + M+ + + L EA +
Sbjct: 481 GVLSACTHGGLVEQGR-----SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFV 535
Query: 271 EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM---PEKNTVSWNAMIAGYVQTKRMD 326
E P++ DV W +++S VD A++ + + N+ +++A+ Y + D
Sbjct: 536 ENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWD 595
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM-PQHDCI 372
A ++ + M + V + + Q TH + D + PQ D I
Sbjct: 596 DAAKIRKLMKARGVKKEQGL--SWVQIQNKTHVFGVEDGLHPQKDEI 640
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 37/205 (18%)
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG----- 486
+VK+G ++ N L+ +Y K G +A+ F E+ K SWNT+++GYA+ G
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 487 ------------------------FGK--DALMLFESMKTVGIKPDDITMVGILSACSHT 520
G+ DA+ +F M + P T+ +L++C+ T
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 521 GL--VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
G + K F + +P + ++++ + G L A+ + M + ++W
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVA---NSLLNMYAKTGDLKMAKVVFDRMKLR-NTSSW 176
Query: 579 GALLGACRLYGKTELAEKAAEVIFE 603
A++ G+ +LA E++ E
Sbjct: 177 NAMISLHMNCGRVDLALAQFELLSE 201
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/734 (38%), Positives = 427/734 (58%), Gaps = 51/734 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y+ G A ++FD+MP + SWN ++S + + +L +AR +F+ +P+ D V
Sbjct: 52 NNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSV 111
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA--AYVQNGRIEEACMLFE 209
SW TM+ GY G +A F RM + + ++ +LA A Q + + F
Sbjct: 112 SWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFV 171
Query: 210 SKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
K V NSL+ + K AK +FDRM ++D +WNTMI+ + Q A
Sbjct: 172 VKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLAL 231
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS--------- 311
LF++ D+ +W ++++GY G A F M P+K T+
Sbjct: 232 ALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANR 291
Query: 312 ------------------------WNAMIAGYVQTKRMDMARELFE--AMTCKNVASWNT 345
NA+I+ Y ++ +++A + E NV ++ +
Sbjct: 292 ESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTS 351
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ GY + G+I AR +FD + D ++W A+I GYAQ+G D+L LF M R G + N
Sbjct: 352 LLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPN 411
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+VLS ++LASL+ GKQLH +++ + VGNAL+ MY + GS+++A F
Sbjct: 412 NYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFN 471
Query: 466 EIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
I +D ++W +MI A+HG G +A+ LFE M + +KPD IT VG+LSAC+H GLVE
Sbjct: 472 HICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVE 531
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G YF M + + P S HY CM+DLLGRAG L+EA N ++NMP EPD WG+LL +
Sbjct: 532 QGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSS 591
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CR++ +LA+ AAE + ++P N+G Y+ L+N +A G+W D +KVR M+D+ VKK
Sbjct: 592 CRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQ 651
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G+SW++++NKVH F V D LHP++D IY + ++ ++K+ GF+ T VLHD+ +E KE
Sbjct: 652 GFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKE 711
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
+LR+HSEKLA+A+ +++ P +R+MKNLRVC DCH+AI++IS +V R II+RD RF
Sbjct: 712 QILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRF 771
Query: 765 HHFSGGSCSCGDYW 778
HHF GSCSC DYW
Sbjct: 772 HHFKDGSCSCQDYW 785
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 134/269 (49%), Gaps = 32/269 (11%)
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
G+ AR+I + N ++ YV+T A LF+ M K SWNT+++ +A
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
++G + AR +FD +PQ D +SW +I GY G + ++ F+ M G + FT+
Sbjct: 91 KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTN 150
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG---------------- 455
VL++CA +L++GK++H +VK+G V N+LL MY KCG
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210
Query: 456 ---------------SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM-K 499
+ A F+++ D D++SWN++I GY G+ AL F M K
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ +KPD T+ +LSAC++ ++ G +
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQ 299
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 167/384 (43%), Gaps = 65/384 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY----------------L 103
D WN I+ HM+ D AL +F+ M VS+N++I+GY L
Sbjct: 210 DTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFML 269
Query: 104 LNGQLDP--------------------ARQVFDQMPQRDL----VSWNVMISGYVRNKSL 139
+ L P +Q+ + + D+ N +IS Y ++ ++
Sbjct: 270 KSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAV 329
Query: 140 SAARNLFEM--MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
A + E+ P +V+++ ++L GY + G D AR IFD + ++ ++W ++ Y Q
Sbjct: 330 EVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQ 389
Query: 198 NGRIEEACMLFE-------SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
NG I +A +LF N+ + + S++ + R+ VS
Sbjct: 390 NGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSV 449
Query: 251 -NTMITGYAQNNYLAEAQRLFEE-APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
N +IT Y+++ + +A+++F +D TWT+M+ Q+G +EA +F+ M N
Sbjct: 450 GNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRIN 509
Query: 309 T----VSWNAMIAGYVQTKRMDMARELFEAMTCKNV-------ASWNTMITGYAQSGEIT 357
+++ +++ ++ + F M KNV + + MI ++G +
Sbjct: 510 LKPDHITYVGVLSACTHVGLVEQGKSYFNLM--KNVHNIEPTSSHYACMIDLLGRAGLLE 567
Query: 358 HARNLFDRMP-QHDCISWAAIIAG 380
A N MP + D ++W ++++
Sbjct: 568 EAYNFIRNMPIEPDVVAWGSLLSS 591
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/745 (37%), Positives = 440/745 (59%), Gaps = 26/745 (3%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
+D+ N + + + G A VF+ M +S VS+ +I GY G + A ++F +M
Sbjct: 277 FDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKM 336
Query: 119 PQRDLVSWNVMISGYVRNKSLSAA--------RNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
Q +V + + S AA ++ + D+ ++ YA+ G
Sbjct: 337 QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSY 396
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGF 226
R++F++++ ++ I+WN ++ + G EEA ++ + +++ L+
Sbjct: 397 KDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNAC 456
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSW-----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
V L + I R+ V+D + N +I+ YA+ + +A+ LF + KD+ +W
Sbjct: 457 VNPTALHWGREIHSRV-VKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISW 515
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR----ELFE 333
TAM+ G ++G EA +F M + N V++ +++ +D R ++ E
Sbjct: 516 TAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIE 575
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
A + NT++ Y+ G + AR +FDRM Q D +++ A+I GYA +++L+L
Sbjct: 576 AGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKL 635
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F ++ G + ++ + ++L+ CAN SLE K++H ++K G+ + +GNAL+ Y K
Sbjct: 636 FDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAK 695
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CGS +A F++++ ++VISWN +I G A+HG G+D L LFE MK GIKPD +T V +
Sbjct: 696 CGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSL 755
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
LSACSH GL+E+G YF SM+RD+G+ P +HY CMVDLLGRAG+LDE + L+K MPF+
Sbjct: 756 LSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQA 815
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+ WGALLGACR++G +AE+AAE +++P+NA +YV LS++YAA+G W +K+R
Sbjct: 816 NTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRK 875
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M RGV K G SW+EV +K+H F D HPE ++IYA L++L +K +G+V T+
Sbjct: 876 LMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRS 935
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
V+HDV E EKE+ + +HSE+LA+AYG++S G PIR+ KNLRVC DCH A K I+KIV
Sbjct: 936 VMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVD 995
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R I+ RD NRFHHF G CSCGDYW
Sbjct: 996 REIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 152/602 (25%), Positives = 281/602 (46%), Gaps = 106/602 (17%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARN 144
R +S Y M+ + L R+V + + Q D + N +I+ Y++ S+ AR
Sbjct: 138 RVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQ 197
Query: 145 LFEMM--PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
++ + +R V SWN M+ GY Q GY + A ++ E+ +GL R+
Sbjct: 198 VWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLL------REMQQHGLALGRATTMRLL 251
Query: 203 EACM--------------LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
+C +++ ++V N ++ + K + +A+ +FD+M + V
Sbjct: 252 SSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVV 311
Query: 249 SWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTW----------------------- 281
SW +I GYA + A Q++ +E V + T+
Sbjct: 312 SWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHI 371
Query: 282 ------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
TA+V Y + G + R +F+ + ++ ++WN MI G + + A
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431
Query: 330 ELFEAM-----------------TCKN----------------------VASWNTMITGY 350
E++ M C N ++ N +I+ Y
Sbjct: 432 EIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMY 491
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A+ G I AR LF++M + D ISW A+I G A+SG ++L +F +M++ G + NR +T
Sbjct: 492 ARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYT 551
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
S+L+ C++ A+L+ G+++H Q+++ G V N L+ MY CGSV++A F+ + +
Sbjct: 552 SILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR 611
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D++++N MI GYA H GK+AL LF+ ++ G+KPD +T + +L+AC+++G +E E
Sbjct: 612 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKE-I 670
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
+S+ G + ++ +V + G +A + M + + +W A++G C +G+
Sbjct: 671 HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHGR 729
Query: 591 TE 592
+
Sbjct: 730 GQ 731
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 196/378 (51%), Gaps = 15/378 (3%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA--PVKDVFTWTAMVSGYVQNGKVD 295
I V D+ + N +I Y Q + EA++++ + + V +W AMV GYVQ G ++
Sbjct: 167 IIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIE 226
Query: 296 EARMIFDAMPEKNTVSWNA----MIAGYVQTKRMDMAREL-FEAMTCK---NVASWNTMI 347
EA + M + A +++ ++ RE+ EAM + +V N ++
Sbjct: 227 EALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCIL 286
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA+ G I AR +FD+M +SW II GYA G+SE + +F +M++ G NR
Sbjct: 287 NMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRI 346
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
+ +VL+ + A+L+ GK +H ++ G E+ VG AL+ MY KCGS ++ FE++
Sbjct: 347 TYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL 406
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
V++D+I+WNTMI G A G ++A ++ M+ G+ P+ IT V +L+AC + + G
Sbjct: 407 VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGR 466
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
E + +D G + + ++ + R G + +A+ L M D +W A++G
Sbjct: 467 EIHSRVVKD-GFMFDISVQNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGG--- 521
Query: 588 YGKTELAEKAAEVIFEME 605
K+ L +A V +M+
Sbjct: 522 LAKSGLGAEALAVFQDMQ 539
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 118/238 (49%), Gaps = 13/238 (5%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
+++ G R+N + +L C + L G+++H +++ + NAL+ MY +CGS
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS 191
Query: 457 VEEAYHAFEEI--VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
+EEA + ++ ++ V SWN M+ GY ++G+ ++AL L M+ G+ T + +L
Sbjct: 192 IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLL 251
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
S+C +E G E + ++ + C++++ + G + EA+ + M +
Sbjct: 252 SSCKSPSALECGREIHVEAMKAR-LLFDVNVANCILNMYAKCGSIHEAREVFDKMETKS- 309
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPE----NAGMYVLLSNLYA--ASGRWG 626
+W ++G Y +E A E+ +M+ E N Y+ + N ++ A+ +WG
Sbjct: 310 VVSWTIIIGG---YADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/646 (40%), Positives = 399/646 (61%), Gaps = 34/646 (5%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN I ++ N + A +F+ MP R + S+ MI+ Y G+L+ AR++ + +P
Sbjct: 78 NLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP 137
Query: 120 QR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
+ D WN MI+GY + + A+ +FE MP +D+VS+N+ML+GY QNG A + F+
Sbjct: 138 DKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFE 197
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
M E+N +SWN ++A YV++G + A LFE N VSW +++ G K ++ +A+ +
Sbjct: 198 SMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEAREL 257
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
FDRMP ++ VSWN MI Y Q+ + EA +LF++ P KD +WT +++GY++ GK+DEAR
Sbjct: 258 FDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEAR 317
Query: 299 MIFDAMPEKN-------------------------------TVSWNAMIAGYVQTKRMDM 327
+++ MP K+ V WN+MIAGY ++ RMD
Sbjct: 318 QVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDE 377
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A LF M KN SWNTMI+GYAQ+G++ A +F M + + +SW ++IAG+ Q+
Sbjct: 378 ALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLY 437
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
D+L+ + M + G++ ++S F LS CANLA+L++G QLH ++K G+ FVGNAL
Sbjct: 438 LDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNAL 497
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KCG V+ A F +I D+ISWN++I+GYA +G+ A FE M + + PD+
Sbjct: 498 IAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDE 557
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T +G+LSACSH GL +G + F M D+ + P ++HY+C+VDLLGR GRL+EA N ++
Sbjct: 558 VTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVR 617
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
M + +A WG+LLGACR++ EL AAE +FE+EP NA Y+ LSN++A +GRW +
Sbjct: 618 GMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEE 677
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD--TLHPEKDRI 671
V +VR+ MR + K G SW+EVQN++ F D L P+ +I
Sbjct: 678 VERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQI 723
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 242/470 (51%), Gaps = 24/470 (5%)
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
G++EEA +F + + +V++NS++ K R+ DA+ +FD+M +R+ VSWNTMI GY
Sbjct: 31 GKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYL 90
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIA 317
NN + EA LF+ P +D F+W M++ Y + GK+++AR + + +P+K +T WNAMIA
Sbjct: 91 HNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIA 150
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
GY + + + A+++FE M K++ S+N+M+ GY Q+G++ A F+ M + + +SW +
Sbjct: 151 GYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLM 210
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+AGY +SG + +LF ++ N + ++L A + ++L ++
Sbjct: 211 VAGYVKSGDLSSAWQLFEKIPNP----NAVSWVTMLCGLAKYGKMAEARELFDRMP---- 262
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
NA++ Y + V+EA F+++ KD +SW T+I GY R G +A ++
Sbjct: 263 SKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQ 322
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M I M G++ G +++ + F + V NS M+ R+G
Sbjct: 323 MPCKDITAQTALMSGLI----QNGRIDEADQMFSRIGAHDVVCWNS-----MIAGYSRSG 373
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
R+DEA NL + MP + ++ +W ++ Y + ++A E+ M +N + L
Sbjct: 374 RMDEALNLFRQMPIK-NSVSWNTMISG---YAQAGQMDRATEIFQAMREKNIVSWNSLIA 429
Query: 618 LYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLH 665
+ + + D K + M G K + T L + VG+ LH
Sbjct: 430 GFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLH 479
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 172/349 (49%), Gaps = 23/349 (6%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N I + + EA R+F K++ T+ +M+S +N ++ +AR +FD M +N V
Sbjct: 21 NRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLV 80
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH- 369
SWN MIAGY+ ++ A ELF+ M ++ SW MIT Y + G++ AR L + +P
Sbjct: 81 SWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 140
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D W A+IAGYA+ G D+ ++F +M P ++S + LA ++H
Sbjct: 141 DTACWNAMIAGYAKKGQFNDAKKVFEQM----------PAKDLVSYNSMLAGYTQNGKMH 190
Query: 430 --GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
Q + E N ++ Y K G + A+ FE+I + + +SW TM+ G A++G
Sbjct: 191 LALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGK 250
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
+A LF+ M + + ++ +++ V++ + F M +S +T
Sbjct: 251 MAEARELFDRMPSKNV----VSWNAMIATYVQDLQVDEAVKLFKKMPH-----KDSVSWT 301
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+++ R G+LDEA+ + MP + D AL+ G+ + A++
Sbjct: 302 TIINGYIRVGKLDEARQVYNQMPCK-DITAQTALMSGLIQNGRIDEADQ 349
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 170/348 (48%), Gaps = 22/348 (6%)
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
K+ + N I + +++ A +F MT KN+ ++N+MI+ A++ I AR LFD+M
Sbjct: 15 KHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQM 74
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-ANLASLELG 425
+ +SW +IAGY + E++ LF M ER N S +++ TC LE
Sbjct: 75 SLRNLVSWNTMIAGYLHNNMVEEASELFDVMP---ERDNFS--WALMITCYTRKGKLEKA 129
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
++L +LV + C+ NA++ Y K G +A FE++ KD++S+N+M+AGY ++
Sbjct: 130 RELL-ELVPDKLDTACW--NAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQN 186
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G AL FESM + ++ + G + +G + + F + PN+
Sbjct: 187 GKMHLALQFFESMTERNVVSWNLMVAGYVK----SGDLSSAWQLFEKIPN-----PNAVS 237
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ M+ L + G++ EA+ L MP + +W A++ Y + ++A ++ +M
Sbjct: 238 WVTMLCGLAKYGKMAEARELFDRMP-SKNVVSWNAMIAT---YVQDLQVDEAVKLFKKMP 293
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
+++ + + N Y G+ + +V +M + + T +QN
Sbjct: 294 HKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQN 341
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 167/377 (44%), Gaps = 56/377 (14%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G D+ WN I + R+G D AL++F MP ++SVS+N MISGY GQ+D A ++F
Sbjct: 355 GAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQ 414
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADA 172
M ++++VSWN +I+G+++N A MM K D ++ LS A
Sbjct: 415 AMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQV 474
Query: 173 ARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
++ + +L+ ++ N L+A Y + GR++ A +F +++SWNSL
Sbjct: 475 GNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSL------ 528
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAM 284
I+GYA N Y +A + FE E V D T+ M
Sbjct: 529 -------------------------ISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGM 563
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK- 338
+S G ++ IF M E + ++ ++ + R++ A M K
Sbjct: 564 LSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKA 623
Query: 339 NVASWNTMITGYAQSGEITHAR----NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
N W +++ + R LF+ P H+ ++ + +A++G E+ R+
Sbjct: 624 NAGLWGSLLGACRVHKNLELGRFAAERLFELEP-HNASNYITLSNMHAEAGRWEEVERVR 682
Query: 395 IEMKRYGERLNRSPFTS 411
+ M+ G+R + P S
Sbjct: 683 MLMR--GKRAGKQPGCS 697
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/656 (39%), Positives = 400/656 (60%), Gaps = 32/656 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN I ++ N + A +F+ M R + S+ MI+ Y G L+ AR++F+ +P
Sbjct: 78 NLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVP 137
Query: 120 QR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
+ D WN MI+GY + A +FE MP +D+VS+N+ML+GY QNG A + F+
Sbjct: 138 DKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFE 197
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
RM E+N +SWN ++A +V N + A LFE + VSW +++ GF + ++ +A+ +
Sbjct: 198 RMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKL 257
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
FDRMP ++ VSWN MI Y Q+ + EA +LF+E P KD +WT M++GYV+ GK+DEAR
Sbjct: 258 FDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAR 317
Query: 299 MIFDAMP-------------------------------EKNTVSWNAMIAGYVQTKRMDM 327
+++ MP +++ + WN+MIAGY Q+ RM
Sbjct: 318 EVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSE 377
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A LF M KN SWNTMI+GYAQ+GE+ A +F+ M + ISW ++I G+ Q+G
Sbjct: 378 ALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLY 437
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
D+L+ + M + G++ ++S F LS+CANLA+L++GKQLH ++K G+ FV NAL
Sbjct: 438 LDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNAL 497
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KCG V+ A F++I D+ISWN++I+GYA +G+ +A FE M + G PD+
Sbjct: 498 IAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDE 557
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T +G+LSACSH GL +G + F M + + P ++HY+C+VDLLGR GRL+EA N+++
Sbjct: 558 VTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVR 617
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
M + +A WG+LL ACR++ EL + AA + E+EP NA Y+ LSN++A +GRW D
Sbjct: 618 GMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWED 677
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
V ++R+ MR+R K+ G SW+EVQN++ F D + I L L ++
Sbjct: 678 VERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMR 733
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 252/517 (48%), Gaps = 55/517 (10%)
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
++V + N + + G D A+R+F ++ KN ++N ++ + +NGR+ +A LF+
Sbjct: 15 KNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM 74
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+ +VSWN+++ G++ + +A +FD M RD SW MIT Y + L +A+ LFE
Sbjct: 75 SQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFE 134
Query: 272 EAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
P K D W AM++GY + G+ D+A +F+ MP K+ VS+N+M+AGY Q +M +A +
Sbjct: 135 LVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMK 194
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
FE M +NV SWN M+ G+ + ++ A LF+++P + +SW ++ G+A+ G ++
Sbjct: 195 FFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEA 254
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
+LF +R P C N+ S NA++
Sbjct: 255 RKLF----------DRMP-------CKNVVSW----------------------NAMIAA 275
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y + ++EA F+E KD +SW TMI GY R G +A ++ M + M
Sbjct: 276 YVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALM 335
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
G++ G +++ ++ F +N+ + NS M+ ++GR+ EA NL + MP
Sbjct: 336 SGLI----QNGRIDEASQVFSQLNKRDAICWNS-----MIAGYCQSGRMSEALNLFRQMP 386
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
+ +A +W ++ Y + ++A E+ M N + L + +G + D K
Sbjct: 387 VK-NAVSWNTMISG---YAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALK 442
Query: 631 VRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLH 665
+ M G K + T L + VG LH
Sbjct: 443 SLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLH 479
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/715 (39%), Positives = 430/715 (60%), Gaps = 29/715 (4%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMP--QRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
V+ +++S Y + G+L + FD +P +RD V N MIS + R + A ++F +
Sbjct: 90 VAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLL 149
Query: 151 ------KRDVVSWNTMLSGYAQN-----GYADAARRIFDRMLEKNEISW-NGLLAAYVQ- 197
+ D S+ ++LS Q + ++ +S N L+A Y++
Sbjct: 150 ASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKC 209
Query: 198 --NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
G +A + + + ++W +++ G V++ + A+ F+ + +V WN MI+
Sbjct: 210 DAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMIS 269
Query: 256 GYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVS-----GYVQNGKVDEARMI---FDA 303
GY Q+ AEA LF K D FT+T+++S G+ +GK + I D
Sbjct: 270 GYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDF 329
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
+PE NA++ Y ++ ++ +A ++F++MT K+V SWNT+++GY +SG + +A +F
Sbjct: 330 VPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIF 389
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
MP +SW +++GY G +ED+L+LF +M+ + + ++ C L +L+
Sbjct: 390 KEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALK 449
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
GKQLH LV+ GFEA GNALL MY +CG+V++A F + + D +SWN MI+
Sbjct: 450 HGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG 509
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+HG G++AL LF+ M GI PD I+ + IL+AC+H GLV+ G +YF SM RD+G+ P
Sbjct: 510 QHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGE 569
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
HY ++DLLGRAGR+ EA++L+K MPFEP A W A+L CR+ G EL AA+ +F+
Sbjct: 570 DHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFK 629
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDT 663
M PE+ G Y+LLSN Y+A+GRW D ++VR MRDRGVKK G SW+EV NKVH F VGDT
Sbjct: 630 MVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDT 689
Query: 664 LHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI 723
HP+ +Y +LE + K+++ G+V TK L D+ EKE++L HSE+LAV++G+L +
Sbjct: 690 KHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKL 749
Query: 724 PAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PAG + V+KNL++C DCH A+ +S+ VGR I++RD RFHHF G CSCG+YW
Sbjct: 750 PAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 214/452 (47%), Gaps = 58/452 (12%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV--RDEV 248
LL Y + + +LF +A+ V+ SL+ + RL D+ FD +PV RD V
Sbjct: 66 LLHLYTLSPDLATPAVLF--RADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTV 123
Query: 249 SWNTMITGYAQNNYLAEAQRLF------EEAPVKDVFTWTAMVS--GYVQNGKVDEARMI 300
N MI+ +A+ + A A +F +++ D +++T+++S G + + V +
Sbjct: 124 LHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQL 183
Query: 301 FDAMPEKN-----TVSWNAMIAGYVQTKRMDM---ARELFEAMTCKNVASWNTMITGYAQ 352
A+ + +VS NA+IA Y++ + AR++ + M K+ +W T++ G+ +
Sbjct: 184 HCAVHKLGAGAVLSVS-NALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVR 242
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G++ AR+ F+ + + W A+I+GY QSG ++ LF M + FTS+
Sbjct: 243 KGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSL 302
Query: 413 LSTCANLASLELGKQLHGQLVKVG----FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
LS CAN GK +HGQ +++ EA V NAL+ +Y K G + A F+ +
Sbjct: 303 LSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMT 362
Query: 469 DKDVISWNT-------------------------------MIAGYARHGFGKDALMLFES 497
KDV+SWNT M++GY G +DAL LF
Sbjct: 363 LKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQ 422
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M++ +KP D T G ++AC G ++ G + ++ G ++ ++ + R G
Sbjct: 423 MRSEDVKPCDYTYAGAVAACGELGALKHGKQ-LHAHLVQCGFEASNSAGNALLTMYARCG 481
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+ +A+ + MP D+ +W A++ A +G
Sbjct: 482 AVKDARLVFLVMP-NVDSVSWNAMISALGQHG 512
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 156/659 (23%), Positives = 269/659 (40%), Gaps = 146/659 (22%)
Query: 16 LHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITT----H 71
LH + L P ++P+ + + L HL + S + PA + VA T+ +
Sbjct: 44 LHARLLTAALLHDP--SHPHLTLRLL--HLYTLSPDLATPAVLFRADPGPVAATSLVSAY 99
Query: 72 MRNGCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD------- 122
G + F+S+P RR +V +NAMIS + PA VF + D
Sbjct: 100 AVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDD 159
Query: 123 ------------------------------------LVSWNVMISGYVRNKSLSA---AR 143
L N +I+ Y++ + AR
Sbjct: 160 YSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDAR 219
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+ + MP++D ++W T++ G+ + G AAR F+ + + ++ WN +++ YVQ+G E
Sbjct: 220 KVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAE 279
Query: 204 ACMLFESKANWEV----VSWNSLM----------------GGFV---------------- 227
A LF + + ++ SL+ G F+
Sbjct: 280 AFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNN 339
Query: 228 -------KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
K ++ A IFD M ++D VSWNT+++GY ++ L A R+F+E P K +
Sbjct: 340 ALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELS 399
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAMT 336
W MVSGYV G ++A +F+ M ++ + AG V + + ++L +
Sbjct: 400 WMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLV 459
Query: 337 -CKNVAS---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
C AS N ++T YA+ G + AR +F MP D +SW A+I+ Q G+ ++L
Sbjct: 460 QCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALE 519
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMY 451
LF +M G +R F ++L+ C + ++ G Q + + G G L+ +
Sbjct: 520 LFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLL 579
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
+ G + EA +D+I KT+ +P
Sbjct: 580 GRAGRIGEA---------RDLI-------------------------KTMPFEPTPAIWE 605
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
ILS C G +E G Y+ ++ + ++P + Y + + AGR +A + K M
Sbjct: 606 AILSGCRINGDMELGA---YAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLM 661
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 270/592 (45%), Positives = 381/592 (64%), Gaps = 2/592 (0%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMPVRDE 247
N ++A V++G I+ A +F ++WNSL+ G K R+ +A +FD +P D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
S+N M++ Y +N +AQ F+ P KD +W M++GY + G++++AR +F +M EK
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
N VSWNAMI+GY++ ++ A F+ + V +W MITGY ++ ++ A +F M
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 368 -QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ ++W A+I+GY ++ ED L+LF M G R N S +S L C+ L++L+LG+
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H + K +L+ MYCKCG + +A+ FE + KDV++WN MI+GYA+HG
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
AL LF M I+PD IT V +L AC+H GLV G YF SM RDY V P HY
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
TCMVDLLGRAG+L+EA L+++MPF P AA +G LLGACR++ ELAE AAE + ++
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+NA YV L+N+YA+ RW DV++VR +M++ V KV GYSW+E++NKVH F D +HP
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHP 544
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
E D I+ L+ELE K+K G+ + LH+V EE+KE +L +HSEKLAVA+G + +P G
Sbjct: 545 ELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQG 604
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I+V KNLR+C DCH AIK IS+I R II+RD RFHHF GSCSCGDYW
Sbjct: 605 SQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 222/438 (50%), Gaps = 65/438 (14%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR- 112
KP+ I N I +R+G D AL VF+ M ++++++N+++ G DP+R
Sbjct: 54 KPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGI----SKDPSRM 109
Query: 113 ----QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+FD++P+ D S+N+M+S YVRN + A++ F+ MP +D SWNTM++GYA+ G
Sbjct: 110 MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRG 169
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ AR +F M+EKNE+SWN +++ Y++ G +E+A F+ VV+W +++ G++K
Sbjct: 170 EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMK 229
Query: 229 QKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLF----------------- 270
K++ A+ +F M V ++ V+WN MI+GY +N+ + +LF
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 271 ----------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ DV T+++S Y + G++ +A +F+ M +K+
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMIT---GYAQSGEITHARNLFD 364
V+WNAMI+GY Q D A LF M + W T + +G + F+
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 365 RM-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
M PQ D + ++ ++G E++L+L M R + + F ++L C
Sbjct: 410 SMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMPF---RPHAAVFGTLLGACR 464
Query: 418 NLASLELGKQLHGQLVKV 435
++EL + +L+++
Sbjct: 465 VHKNVELAEFAAEKLLQL 482
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 163/344 (47%), Gaps = 15/344 (4%)
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ- 321
L + L + + +F +++ V++G +D A +F M KNT++WN+++ G +
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
RM A +LF+ + + S+N M++ Y ++ A++ FDRMP D SW +I GY
Sbjct: 106 PSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGY 165
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
A+ G E + LF M N + +++S LE KV G
Sbjct: 166 ARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGV 217
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
A++ Y K VE A F+++ V+K++++WN MI+GY + +D L LF +M
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
GI+P+ + L CS ++ G + +++ + + T ++ + + G L
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELG 336
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+A L + M + D W A++ Y + A+KA + EM
Sbjct: 337 DAWKLFEVMK-KKDVVAWNAMISG---YAQHGNADKALCLFREM 376
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/701 (39%), Positives = 418/701 (59%), Gaps = 18/701 (2%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y G+ AR+VFD MP +L ++N ++S + LS LF M +RD+V
Sbjct: 45 NHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIV 104
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNE------ISWNGL-LAAYVQNGRI---EEAC 205
S+N +++G++ G A R++ +L+ + I+ + + +AA R + C
Sbjct: 105 SYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHC 164
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+ + L+ + K +GDAK FD + ++ V +NTMITG + + E
Sbjct: 165 QILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEE 224
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
A+RLFE +D TWT MV+G+ QNG EA IF M + + ++ +++
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 322 TKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
++ +++ + NV + ++ Y++ I A +F RM + ISW A+
Sbjct: 285 LSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTAL 344
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I GY Q+G SE+++R+F EM+R G + SV+S+CANLASLE G Q H + G
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGL 404
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
V NAL+ +Y KCGS+E+A+ F+E+ D +SW +++GYA+ G K+ + LFE
Sbjct: 405 MHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEK 464
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M G+KPD +T +G+LSACS G VEKG YF+SM +D+G++P HYTCM+DL R+G
Sbjct: 465 MLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSG 524
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
+L EA+ +K MP PDA WG LL ACRL G E+ + AAE + E++P+N YVLL +
Sbjct: 525 KLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCS 584
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
++AA G+W +V+++R MRDR VKK G SW++ +NKVH FS D HP IY LE
Sbjct: 585 MHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEW 644
Query: 678 LEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRV 737
L K+ ++G+ VLHDV + +K HM+ +HSEKLA+A+G++ +P PIR++KNLRV
Sbjct: 645 LNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRV 704
Query: 738 CEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
C DCHNA K ISKI GR I++RD RFH FS G CSCGD+W
Sbjct: 705 CVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 225/528 (42%), Gaps = 105/528 (19%)
Query: 50 RNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLD 109
R P P + + N +T + + G A VF++MP + +YNA++S L
Sbjct: 33 RTLPHPPPTYLL---NHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLS 89
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV------VSWNTMLSG 163
+F M QRD+VS+N +I+G+ S + A ++ + + D ++ +TM+
Sbjct: 90 DMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMA 149
Query: 164 YAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
+ G ++ ++L N + L+ Y + + +A F+ + VV +
Sbjct: 150 ASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMY 209
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK--- 276
N+++ G ++ K + +A+ +F+ M RD ++W TM+TG+ QN +EA +F +
Sbjct: 210 NTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIA 269
Query: 277 ------------------------------------DVFTWTAMVSGYVQNGKVDEARMI 300
+VF +A+V Y + + A +
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETV 329
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW 343
F M KN +SW A+I GY Q + A +F M +C N+AS
Sbjct: 330 FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASL 389
Query: 344 ----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
N ++T Y + G I A LFD M HD +SW A+++GY
Sbjct: 390 EEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGY 449
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL-------HGQLVK 434
AQ G +++++ LF +M G + + F VLS C+ +E G+ HG +V
Sbjct: 450 AQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHG-IVP 508
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
+ C + +Y + G ++EA +++ + D I W T+++
Sbjct: 509 IDDHYTCMID-----LYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 171/395 (43%), Gaps = 74/395 (18%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A F+ + ++ V YN MI+G L ++ AR++F+ M RD ++W M++G+ +N
Sbjct: 194 AKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLE 253
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
S A +F M G A + Y F +L + G L+A Q
Sbjct: 254 SEALEIFRRM----------RFQGIAIDQYT------FGSIL-----TACGALSALEQGK 292
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+I + ++ + V ++L+ + K + + A+ +F RM ++ +SW +I GY Q
Sbjct: 293 QIH--AYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQ 350
Query: 260 NNYLAEAQRLFEEAPVKDV-------------------------FTWTAMVSG------- 287
N EA R+F E + F A+VSG
Sbjct: 351 NGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITV 410
Query: 288 -------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
Y + G +++A +FD M + VSW A+++GY Q R +LFE M K V
Sbjct: 411 SNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGV 470
Query: 341 ----ASWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQSGYSEDSL 391
++ +++ +++G + R+ F M + I + +I Y++SG +++
Sbjct: 471 KPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAE 530
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+M + + + + ++LS C +E+GK
Sbjct: 531 EFIKQMPMHPDAIG---WGTLLSACRLRGDMEIGK 562
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 161/359 (44%), Gaps = 33/359 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG-----QLDPAR 112
D D W +T +NG AL +F M R ++ + G +L L+ +
Sbjct: 234 DRDSITWTTMVTGFTQNGLESEALEIFRRM-RFQGIAIDQYTFGSILTACGALSALEQGK 292
Query: 113 QVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+ + + ++ + ++ Y + +S+ A +F M ++++SW ++ GY QNG
Sbjct: 293 QIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNG 352
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWN 220
++ A R+F M ++ ++ + ++++ +EE C+ S + N
Sbjct: 353 CSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSN 412
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV-- 278
+L+ + K + DA +FD M D+VSW +++GYAQ E LFE+ K V
Sbjct: 413 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKP 472
Query: 279 --FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMAREL 331
T+ ++S + G V++ R F +M + + + + MI Y ++ ++ A E
Sbjct: 473 DGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEF 532
Query: 332 FEAMTC-KNVASWNTMITGYAQSGEIT----HARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ M + W T+++ G++ A NL + PQ+ S+ + + +A G
Sbjct: 533 IKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPA-SYVLLCSMHAAKG 590
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 294/798 (36%), Positives = 452/798 (56%), Gaps = 69/798 (8%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLL 104
+R + + D+ W+ I+ + +NG AL F+ M + + ++++++ +
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 105 NGQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
L +QV + + D+ N ++ Y + ++ LF+ +P+R+VVSWN +
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229
Query: 161 LSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV-----QNGRIEEACMLFESK 211
S Y Q + A +F M ++ NE S + ++ A G+I L +
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG-YLIKLG 288
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY-------LA 264
+W+ S N+L+ + K L DA +F+++ D VSWN +I G + + L
Sbjct: 289 YDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLG 348
Query: 265 EAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+ +R + +K D+F +V Y + +++ARM F+ +PEK+ ++WNA+I+GY
Sbjct: 349 QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408
Query: 320 VQTKRMDMARELFEAM--------------------------TCKNVASW---------- 343
Q A LF M C+ V
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 468
Query: 344 ---NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
N++I Y + + A +F+ D +S+ ++I YAQ G E++L+LF+EM+
Sbjct: 469 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM 528
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
+ +R +S+L+ CANL++ E GKQLH ++K GF F GN+L+ MY KCGS+++A
Sbjct: 529 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
AF E+ ++ ++SW+ MI G A+HG G+ AL LF M G+ P+ IT+V +L AC+H
Sbjct: 589 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 648
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
GLV + YF SM +G P +HY CM+DLLGRAG+++EA L+ MPFE +A+ WGA
Sbjct: 649 GLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 708
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
LLGA R++ EL +AAE++F +EPE +G +VLL+N+YA++G+W +V++VR MRD V
Sbjct: 709 LLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKV 768
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGE 700
KK G SW+EV++KV+TF VGD H IYA L+EL + + G+V ++ LHDV +
Sbjct: 769 KKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQ 828
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
EKE +L +HSEKLAVA+G+++ P G PIRV KNLRVC DCH A K+I KIV R II+RD
Sbjct: 829 SEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRD 888
Query: 761 NNRFHHFSGGSCSCGDYW 778
NRFHHF GSCSCGDYW
Sbjct: 889 INRFHHFKDGSCSCGDYW 906
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/607 (27%), Positives = 292/607 (48%), Gaps = 69/607 (11%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLF 146
+SVSY+ ++S L P Q+ + + L N +I+ Y + + AR L
Sbjct: 55 TSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLV 114
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA--YVQNGR 200
+ + D+VSW+ ++SGYAQNG A F M ++ NE +++ +L A V++ R
Sbjct: 115 DESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLR 174
Query: 201 IEEAC--MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
I + ++ S +V N+L+ + K D+K +FD +P R+ VSWN + + Y
Sbjct: 175 IGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234
Query: 259 QNNYLAEAQRLFEEAPVK---------------------------------------DVF 279
Q ++ EA LF E + D F
Sbjct: 235 QXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+ A+V Y + G + +A +F+ + + + VSWNA+IAG V + + A EL M +
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQL 354
Query: 340 VASWNTM------------ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+S M + Y++ + AR F+ +P+ D I+W AII+GY+Q
Sbjct: 355 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 414
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
++L LF+EM + G N++ +++L + A L + + +Q+HG VK GF + +V N+L
Sbjct: 415 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL 474
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ Y KC VE+A FEE D++S+ +MI YA++G G++AL LF M+ + +KPD
Sbjct: 475 IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 534
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+L+AC++ E+G + + + YG + + +V++ + G +D+A
Sbjct: 535 FVCSSLLNACANLSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 593
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWG 626
+ E +W A++G +G +A ++ +M E ++ L ++ A G
Sbjct: 594 ELT-ERGIVSWSAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG 649
Query: 627 DVSKVRL 633
V++ +L
Sbjct: 650 LVTEAKL 656
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 215/539 (39%), Gaps = 151/539 (28%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV- 278
N L+ + K + G A+ + D D VSW+ +I+GYAQN A F E + V
Sbjct: 95 NHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154
Query: 279 ---FTWTAM---------------------VSGY-----------VQNGKVDE---ARMI 300
FT++++ VSG+ V K DE ++ +
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA------------------- 341
FD +PE+N VSWNA+ + YVQ A LF M +
Sbjct: 215 FDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDS 274
Query: 342 --------------------SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
S N ++ YA+ G++ A ++F+++ Q D +SW A+IAG
Sbjct: 275 SRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGC 334
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
+ E +L L +MKR QLH L+K+ E+
Sbjct: 335 VLHEHHEQALELLGQMKR---------------------------QLHSSLMKMDMESDL 367
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
FV L+ MY KC +E+A AF + +KD+I+WN +I+GY+++ +AL LF M
Sbjct: 368 FVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKE 427
Query: 502 GIKPDDITMVGILSACS-----------HTGLVEKGTEY-FYSMNR---DYG-------- 538
GI + T+ IL + + H V+ G Y +N YG
Sbjct: 428 GIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA 487
Query: 539 -------VIPNSKHYTCMVDLLGRAGRLDEAQNL---MKNMPFEPDAATWGALLGACRLY 588
I + +T M+ + G+ +EA L M++M +PD +LL AC
Sbjct: 488 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 547
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVL-------LSNLYAASGRWGDVSKVRLKMRDRGV 640
E ++ I + +VL L N+YA G D + ++ +RG+
Sbjct: 548 SAFEQGKQLHVHILKYG------FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 600
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 270/663 (40%), Positives = 401/663 (60%), Gaps = 39/663 (5%)
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
+S+ T L+ + +N D AR IFD++ N + ++A Y +N R+ +A LF+ +
Sbjct: 13 LSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR 72
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+VVSWNS++ G + LG A +FD MP ++ +SW TM+ GY + + AQRLF +
Sbjct: 73 DVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMH 132
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
VKDV W AMV GY +NG+V+E +F+ MP ++ +SW +MI G + + A +F+
Sbjct: 133 VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKK 192
Query: 335 M-----------------TCKNVASWN----------------------TMITGYAQSGE 355
M C N +N ++IT YA +
Sbjct: 193 MLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMK 252
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I HA +F+ + + W A++ Y + +D+LR+F +M + G N+S F+ L
Sbjct: 253 IEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKA 312
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C L +L+ GK++H +K+G E FVGN+L+VMY +CG+V A F I +KD++SW
Sbjct: 313 CCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSW 372
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N++I G A+HGFG AL+ F M G+ P++IT G+LSACS +G++ KG +F ++R
Sbjct: 373 NSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISR 432
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+ +HY CMVD+LGR G+LDEA+ L++ MP + ++ W ALL ACR++ E+AE
Sbjct: 433 YKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAE 492
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
+AA+ I ++EP + YVLLSN+YA++GRW DVS++R+KM+ G+ K G SW+ ++ K
Sbjct: 493 RAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKK 552
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F D HP +RIY L+ L KLK+ G+V K LHDV +E+KE ML +HSE+LA
Sbjct: 553 HEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLA 612
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+A+G++S G I VMKNLRVC DCH+ IK +SKIVGR I++RD+ RFHHF G CSC
Sbjct: 613 IAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCS 672
Query: 776 DYW 778
DYW
Sbjct: 673 DYW 675
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 225/473 (47%), Gaps = 70/473 (14%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+ ++ H++N D A +F+ +P + Y MI+GY N +L A ++FD+M RD+
Sbjct: 15 YTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDV 74
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
VSWN MI G + +L A LF+ MP+++V+SW TM++GY + G + A+R+F M K
Sbjct: 75 VSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVK 134
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ +WN ++ Y +NGR+EE LFE +V+SW S++GG + +A ++F +M
Sbjct: 135 DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKM- 193
Query: 244 VRD--EVSWNT--------------------------------------MITGYAQNNYL 263
+R E +W+T +IT YA +
Sbjct: 194 LRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKI 253
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF------DAMPEKNTVSWNAMIA 317
A ++F E K+V WTA+++ YV N K +A +F A+P ++T S +
Sbjct: 254 EHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFS--ITLK 311
Query: 318 GYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
+ +D +E+ M K +V N+++ Y + G + A +F + + D +
Sbjct: 312 ACCGLEALDKGKEI-HTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIV 370
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
SW +II G AQ G+ +L F +M R G N FT +LS C+ L G+ +
Sbjct: 371 SWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYI 430
Query: 433 VKVGFEA------GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+ C V + +CG ++EA EE+V + N+MI
Sbjct: 431 SRYKSNVLRPQHYACMVD-----ILGRCGKLDEA----EELVRYMPVKANSMI 474
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 10/276 (3%)
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
T+S+ +A +++ +R+D AR +F+ + N+ + MI GY ++ + A LFDRM
Sbjct: 12 TLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSV 71
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D +SW ++I G G + RLF EM N +T++++ +EL ++L
Sbjct: 72 RDVVSWNSMIKGCLDCGNLGMATRLFDEMPEK----NVISWTTMVNGYLKFGRVELAQRL 127
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
+ A NA++ Y + G VEE FEE+ +DVISW +MI G +G
Sbjct: 128 FLDMHVKDVAA----WNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKS 183
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
++AL +F+ M G++P T +LSAC++ G + + + G +
Sbjct: 184 EEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVK-LGCFFHEFISVS 242
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
++ +++ A + N + W ALL A
Sbjct: 243 LITFYANCMKIEHAHKIF-NETLTKNVVKWTALLTA 277
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 291/724 (40%), Positives = 420/724 (58%), Gaps = 28/724 (3%)
Query: 80 ALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
A +F+ +P +R+ ++N+++S Y +G+L AR VF +MP+RD VSW VM+ G R
Sbjct: 82 ARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVG 141
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM--------LEKNEISWN 189
A +F M + L+ + A AR + ++ L N
Sbjct: 142 RFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVAN 201
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
+L Y + G E A +FE V SWN+++ R+ A +F+ MP R VS
Sbjct: 202 SVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVS 261
Query: 250 WNTMITGYAQNNYLAEAQRLFEE-------APVKDVFTWTAMVS-----GYVQNGKVDEA 297
WN +I GY QN A+A F AP D FT T+++S G V GK A
Sbjct: 262 WNAVIAGYNQNGLNAKALWFFSRMLSYSTMAP--DEFTITSVLSACANLGMVSIGKQVHA 319
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE--AMTCKNVASWNTMITGYAQSGE 355
++ MP V+ NA+I+ Y ++ ++ AR + + M NV S+ ++ GY + G+
Sbjct: 320 YILRSRMPYIGQVT-NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGD 378
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ HAR +FD M D ++W A+I GY Q+G++++++ LF M R G N +VLS
Sbjct: 379 MKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSV 438
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKDVIS 474
CA+LA LE GKQ+H + ++ E V N+++ MY + GS+ A F+ + K+ ++
Sbjct: 439 CASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT 498
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W +MI A+HG G+DA+ LFE M VG+KPD IT VG+LSAC+H G V++G YF +
Sbjct: 499 WTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQ 558
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+G++P HY CMVDLL RAG EAQ ++ MP EPDA WG+LL ACR++ +LA
Sbjct: 559 DKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLA 618
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
E AAE + ++P N+G Y LSN+Y+A GRW D +K+ + +D+ VKK TG+SW + N+
Sbjct: 619 ELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNR 678
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
VH F D LHP++D +Y ++ +K+ GFV + VLHDV +E KE ML HSEKL
Sbjct: 679 VHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKL 738
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+G++S P +R+MKNLRVC DCH AIK ISK+ R IILRD RFHHF G CSC
Sbjct: 739 AIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSC 798
Query: 775 GDYW 778
DYW
Sbjct: 799 KDYW 802
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 156/607 (25%), Positives = 260/607 (42%), Gaps = 133/607 (21%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
PA ++ WN ++ + ++G A VF MP R VS+ M+ G G+ A ++
Sbjct: 90 PAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKM 149
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARN--------LFEMMPKRDVVSWNTMLSGYAQ 166
F M L ++ + + + + AR + ++ V N++L+ Y +
Sbjct: 150 FLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGK 209
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
G A+ AR +F+RM E++ SWN +++ GR++ A LFE+ + +VSWN+++ G+
Sbjct: 210 CGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGY 269
Query: 227 VKQKRLGDAKWIF-----------------------------------------DRMPVR 245
+ A W F RMP
Sbjct: 270 NQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYI 329
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGKVDEARMIFDA 303
+V+ N +I+ YA++ + A+ + ++A + D V ++TA++ GYV+ G + AR +FD
Sbjct: 330 GQVT-NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDV 388
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT--------------------------- 336
M ++ V+W AMI GY Q D A ELF M
Sbjct: 389 MSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYG 448
Query: 337 ----CKNVASW--------NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQ 383
CK + S N+++T YA+SG + AR +FDR+ + + ++W ++I AQ
Sbjct: 449 KQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQ 508
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G ED++ LF EM R G + +R F VLS C ++ ++ GK+ QL
Sbjct: 509 HGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQD--------- 559
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
K G V E H + M+ AR G +A + M +
Sbjct: 560 ---------KHGIVPEMSH------------YACMVDLLARAGLFSEAQEFIQQMP---V 595
Query: 504 KPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
+PD I +LSAC + L E E S+ D G NS Y+ + ++ GR +
Sbjct: 596 EPDAIAWGSLLSACRVHKNADLAELAAEKLLSI--DPG---NSGAYSALSNVYSACGRWN 650
Query: 561 EAQNLMK 567
+A + K
Sbjct: 651 DAAKIWK 657
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/590 (45%), Positives = 375/590 (63%), Gaps = 3/590 (0%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMPVRDEVSW 250
+AA V+ G + A F S ++N L+ G+ + RL DA+ +FDR+P D VS+
Sbjct: 73 VAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSY 132
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
NT+++ + + A+RLF PV+DV +W MVSG ++G V+EA+ +F AMP +N+V
Sbjct: 133 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSV 192
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQH 369
SWNAM++G+ ++ M A E F K A W M++GY G + A F+ MP
Sbjct: 193 SWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVR 252
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQL 428
+ +SW A++AGY ++ +++D+LRLF M R + N S +SVL C+NL++L GKQ+
Sbjct: 253 NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI 312
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H +K+ VG +L+ MYCKCG + A F E+ +DV++WN MI+GYA+HG G
Sbjct: 313 HQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDG 372
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A+ LFE MK G++P+ IT V +L+AC HTGL + G F M YG+ P HY+C
Sbjct: 373 KEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSC 432
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLL RAG+L+ A +L+++MPFEP + +G LL ACR+Y E AE AA + E +P++
Sbjct: 433 MVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQS 492
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
AG YV L+N+YA + +W DVS+VR M+D V K GYSW+E++ +H F D LHP+
Sbjct: 493 AGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQL 552
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
I+ L +L ++K G+V VLHDV E K ML HSEKLA+++G++S G
Sbjct: 553 YLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMT 612
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+R+ KNLRVC DCHNA K ISKI R IILRD RFHHF GG CSCGDYW
Sbjct: 613 LRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 191/353 (54%), Gaps = 16/353 (4%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-GQLDPARQVFDQMPQRDL 123
VA+ +R G A F S PR+++ +YN +++GY G+L AR +FD++P D
Sbjct: 70 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 129
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
VS+N ++S + + AR LF MP RDVVSWNTM+SG +++G + A+ +F M +
Sbjct: 130 VSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR 189
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
N +SWN +++ + + + A F + + V W +++ G++ + A F+ M
Sbjct: 190 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 249
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEA 297
PVR+ VSWN ++ GY +N++ +A RLF EA V+ + T ++++ G +
Sbjct: 250 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 309
Query: 298 RMIFD---AMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
+ I +P +N ++++ Y + + A +LF M ++V +WN MI+GYAQ
Sbjct: 310 KQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQH 369
Query: 354 GEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YG 401
G+ A NLF+RM + + I++ A++ +G + +R F M+ YG
Sbjct: 370 GDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYG 422
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 39/374 (10%)
Query: 13 SCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHM 72
+C+L + +++ RL RHL + P P D +N ++ H
Sbjct: 101 NCLLAGYARALGRLAD-------------ARHLFDR---IPTP----DAVSYNTLLSCHF 140
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
+G D A +F SMP R VS+N M+SG +G ++ A+ VF MP R+ VSWN M+SG
Sbjct: 141 ASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSG 200
Query: 133 YVRNKSLSAARNLFEMMPKR-DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
+ ++ +SAA F P++ D V W M+SGY G A F+ M +N +SWN +
Sbjct: 201 FACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAV 260
Query: 192 LAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMP 243
+A YV+N ++A LF E+ + +S++ G LG K I ++P
Sbjct: 261 VAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLP 320
Query: 244 V-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ R+ ++++ Y + L+ A +LF E +DV W AM+SGY Q+G EA +F+
Sbjct: 321 LSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFE 380
Query: 303 AMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQS 353
M E N +++ A++ + T D FE M V ++ M+ ++
Sbjct: 381 RMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRA 440
Query: 354 GEITHARNLFDRMP 367
G++ A +L MP
Sbjct: 441 GKLERAVDLIRSMP 454
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 195/386 (50%), Gaps = 27/386 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A H+F+ +P +VSYN ++S + +G D AR++F MP RD+VSWN M+SG ++ ++
Sbjct: 117 ARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAV 176
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE-ISWNGLLAAYVQN 198
A+ +F MP R+ VSWN M+SG+A + AA F EK + + W +++ Y+
Sbjct: 177 EEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDI 236
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN-----TM 253
G + +A FE+ +VSWN+++ G+VK DA +F M V N ++
Sbjct: 237 GNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSV 296
Query: 254 ITGYAQNNYLAEAQRLFE---EAPV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
+ G + + L +++ + + P+ +++ T++VS Y + G + A +F M ++
Sbjct: 297 LLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDV 356
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMI---TGYAQSGEITHARNLFDR 365
V+WNAMI+GY Q A LFE M + V +W T + T +G F+
Sbjct: 357 VAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEG 416
Query: 366 M-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
M P+ D ++ ++ ++G E ++ L M + S + ++L+ C
Sbjct: 417 MQELYGIEPRVD--HYSCMVDLLCRAGKLERAVDLIRSMPF---EPHPSAYGTLLAACRV 471
Query: 419 LASLELGKQLHGQLV-KVGFEAGCFV 443
+LE + G+L+ K AG +V
Sbjct: 472 YKNLEFAELAAGKLIEKDPQSAGAYV 497
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 154/317 (48%), Gaps = 25/317 (7%)
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT-KRMDMARELFEAMTCKNV 340
T V+ V+ G + A F + P K T ++N ++AGY + R+ AR LF+ + +
Sbjct: 70 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 129
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
S+NT+++ + SG+ AR LF MP D +SW +++G ++SG E++ +F+ M
Sbjct: 130 VSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAM--- 186
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHG--QLVKVGFEAG-CFVGNALLVMYCKCGSV 457
P + +S A ++ + + + + E G + A++ Y G+V
Sbjct: 187 -------PVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNV 239
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSA 516
+A FE + ++++SWN ++AGY ++ DAL LF +M + ++P+ T+ +L
Sbjct: 240 VKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLG 299
Query: 517 CSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTC---MVDLLGRAGRLDEAQNLMKNMPFE 572
CS+ + G + + + M +P S++ T +V + + G L A L M
Sbjct: 300 CSNLSALGFGKQIHQWCMK-----LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM-HT 353
Query: 573 PDAATWGALLGACRLYG 589
D W A++ +G
Sbjct: 354 RDVVAWNAMISGYAQHG 370
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 20/193 (10%)
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH-GFGKDALMLFESMK 499
C + + + G + A AF K ++N ++AGYAR G DA LF+ +
Sbjct: 66 CSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIP 125
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
T PD ++ +LS +G + F SM + + + MV L ++G +
Sbjct: 126 T----PDAVSYNTLLSCHFASGDADGARRLFASMP-----VRDVVSWNTMVSGLSKSGAV 176
Query: 560 DEAQNLMKNMPFEPDAATWGALLG--ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
+EA+ + MP ++ +W A++ AC AAE F PE G VL +
Sbjct: 177 EEAKAVFLAMPVR-NSVSWNAMVSGFAC------SRDMSAAEEWFRNAPEK-GDAVLWTA 228
Query: 618 LYAASGRWGDVSK 630
+ + G+V K
Sbjct: 229 MVSGYMDIGNVVK 241
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/725 (38%), Positives = 435/725 (60%), Gaps = 30/725 (4%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP--QRDLVSWNVMISGYVRNKSLS 140
+F S P V+ ++++ + G+L A FD +P +RD V N M+S + R +
Sbjct: 85 LFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAA 144
Query: 141 AARNLFEMMP-----KRDVVSWNTMLSGYAQ--NGYADAARRIFDRMLEKNEISW----N 189
A ++F + + D S+ ++S Q N A ++ +L+ + N
Sbjct: 145 PAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSN 204
Query: 190 GLLAAYVQNGRIE---EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
L+A Y++ E +A + + + + ++W +++ G+V++ + A+ +F+ + +
Sbjct: 205 ALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKF 264
Query: 247 EVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVS-----GYVQNGKVDE 296
+V WN MI+GY Q+ A+A LF E+ P+ D FT+T+++S G+ +GK
Sbjct: 265 DVVWNAMISGYVQSGMCADAFELFRRMVSEKVPL-DEFTFTSVLSACANAGFFVHGKSVH 323
Query: 297 ARMI---FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
++I + +PE NA++ Y + ++ +A+ +F+ M K+V SWNT+++GY S
Sbjct: 324 GQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS 383
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + A +F MP + +SW +++GY G SED+L+LF +M+ + + +
Sbjct: 384 GCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAI 443
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
+ C L +L+ G+QLH LV+ GFEA GNALL MY KCG+V +A F + + D +
Sbjct: 444 AACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSV 503
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWN MI+ +HG G++AL LF+ M GI PD I+ + IL+AC+H GLV++G YF SM
Sbjct: 504 SWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESM 563
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
RD+G+ P HY ++DLLGR+GR+ EA++L+K MPFEP + W A+L CR G E
Sbjct: 564 KRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEF 623
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
AA+ +F M P++ G Y+LLSN Y+A+GRW D ++VR MRDRGVKK G SW+EV +
Sbjct: 624 GAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGS 683
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
K+H F VGDT HPE +Y +LE + ++++ G+V TK VLHD+ EKE++L HSEK
Sbjct: 684 KIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEK 743
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LAV +G+L +P G + V+KNLR+C DCH A+ +SK VGR I++RD RFHHF G CS
Sbjct: 744 LAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECS 803
Query: 774 CGDYW 778
CG+YW
Sbjct: 804 CGNYW 808
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 35/366 (9%)
Query: 65 NVAITTHMRNGCCDS------ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
N I +M+ CD+ A V + MP + +++ M+ GY+ G ++ AR VF+++
Sbjct: 204 NALIALYMK---CDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEV 260
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAAR 174
+ V WN MISGYV++ + A LF M D ++ ++LS A G+ +
Sbjct: 261 DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGK 320
Query: 175 RIFDRM--LEKNEISW------NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
+ ++ L+ N + N L+ Y + G+I A +F++ +VVSWN+++ G+
Sbjct: 321 SVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGY 380
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWT 282
+ L A +F MP ++++SW M++GY +A +LF + +DV +T+
Sbjct: 381 IDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYA 440
Query: 283 AMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
++ G +++G+ A ++ N+ NA++ Y + ++ AR +F M
Sbjct: 441 GAIAACGELGALKHGRQLHAHLVQCGFEASNSAG-NALLTMYAKCGAVNDARLVFLVMPN 499
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRL 393
+ SWN MI+ Q G A LFD+M D IS+ I+ +G ++
Sbjct: 500 LDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHY 559
Query: 394 FIEMKR 399
F MKR
Sbjct: 560 FESMKR 565
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 198/489 (40%), Gaps = 111/489 (22%)
Query: 55 PAGDWDIRQ------------WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY 102
P WD R+ W + ++R G ++A VF + + V +NAMISGY
Sbjct: 216 PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGY 275
Query: 103 LLNGQLDPARQVFDQM-------------------------------------------P 119
+ +G A ++F +M P
Sbjct: 276 VQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVP 335
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ L N +++ Y + + A+ +F+ M +DVVSWNT+LSGY +G D A +F
Sbjct: 336 EAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKV 395
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----------------------- 216
M KN++SW +++ YV G E+A LF +V
Sbjct: 396 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 455
Query: 217 ----------------VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ N+L+ + K + DA+ +F MP D VSWN MI+ Q+
Sbjct: 456 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 515
Query: 261 NYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----- 311
+ EA LF+ E D ++ +++ G VDE F++M +S
Sbjct: 516 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 575
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITH----ARNLFDRM 366
+ +I ++ R+ AR+L + M + S W +++G +G++ A LF +
Sbjct: 576 YARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMI 635
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
PQHD ++ + Y+ +G D+ R+ M+ G + + P S + + + +G
Sbjct: 636 PQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRG--VKKEPGCSWIEVGSKIHVFLVGD 692
Query: 427 QLHGQLVKV 435
H + +V
Sbjct: 693 TKHPEAQEV 701
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 303/846 (35%), Positives = 440/846 (52%), Gaps = 129/846 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ------------ 107
DIR +T +R G DSA F R V YNA+I+ +G
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322
Query: 108 -----------------------LDPARQVFDQMPQ----RDLVSWNVMISGYVRNKSLS 140
L+ + + + + D+ N +IS Y R L
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AR LF MPKRD++SWN +++GYA+ A R++ +M ++ +++ LL+A
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442
Query: 197 QNGRIEEACMLFES------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+ + M+ E K+N + N+LM + + L +A+ +F+ RD +SW
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLA--NALMNMYRRCGSLMEAQNVFEGTQARDVISW 500
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSG------------------- 287
N+MI G+AQ+ A +LF+E + D T+ +++SG
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Query: 288 ----------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
Y++ G + +AR +F ++ ++ +SW AMI G A EL
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIEL 620
Query: 332 FEAM-----------------TCKNVASW----------------------NTMITGYAQ 352
F M C + A N +I+ Y++
Sbjct: 621 FWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSK 680
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG +T AR +FD+MP D +SW IIAGYAQ+G + ++ +M+ N+ F S+
Sbjct: 681 SGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSL 740
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L+ C++ ++LE GK++H ++VK + VG AL+ MY KCGS EA F+ I++K+V
Sbjct: 741 LNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNV 800
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
++WN MI YA+HG AL F M+ GIKPD T ILSAC+H GLV +G + F S
Sbjct: 801 VTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSS 860
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M +YGV+P +HY C+V LLGRA R EA+ L+ MPF PDAA W LLGACR++G
Sbjct: 861 MESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIA 920
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
LAE AA ++ N +Y+LLSN+YAA+GRW DV+K+R M RG++K G SW+EV
Sbjct: 921 LAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVD 980
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
N +H F D HPE IYA L+ L ++++ G+ T+ VLHD+G+ +E L HSE
Sbjct: 981 NIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSE 1040
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
+LA+AYG++ P G PIR+ KNLR+C DCH A K ISK+VGR II RD+NRFH F G C
Sbjct: 1041 RLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKC 1100
Query: 773 SCGDYW 778
SC DYW
Sbjct: 1101 SCEDYW 1106
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 179/698 (25%), Positives = 300/698 (42%), Gaps = 135/698 (19%)
Query: 40 TLKRHLNSKSRNKPKPAGDW---DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN 96
T KR L R + W DI N+ I +++ A VF MPRR +S+N
Sbjct: 38 TRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWN 97
Query: 97 AMISGYLLNGQLDPARQVFDQMP------------------------------------- 119
++IS Y G A Q+F++M
Sbjct: 98 SLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKA 157
Query: 120 --QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
QRD N ++S Y + L AR +F + RDVVS+NTML YAQ Y +F
Sbjct: 158 GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLF 217
Query: 178 DRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQ 229
+M + +++++ LL A+ ++E + E N ++ +L+ V+
Sbjct: 218 GQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC 277
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----------------------- 266
+ AK F RD V +N +I AQ+ + EA
Sbjct: 278 GDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSIL 337
Query: 267 ----------------QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+ E+ DV A++S Y + G + +AR +F MP+++ +
Sbjct: 338 NACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLI 397
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW---------- 343
SWNA+IAGY + + A L++ M C N +++
Sbjct: 398 SWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI 457
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
N ++ Y + G + A+N+F+ D ISW ++IAG+AQ G E +
Sbjct: 458 LRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAY 517
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+LF EM+ + F SVLS C N +LELGKQ+HG++ + G + +GNAL+ MY
Sbjct: 518 KLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMY 577
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
+CGS+++A + F + +DV+SW MI G A G A+ LF M+ G +P T
Sbjct: 578 IRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFS 637
Query: 512 GILSACSHTGLVEKGTEYF-YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
IL C+ + +++G + Y +N Y + ++ ++ ++G + +A+ + MP
Sbjct: 638 SILKVCTSSACLDEGKKVIAYILNSGYEL--DTGVGNALISAYSKSGSMTDAREVFDKMP 695
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
D +W ++ Y + L + A E ++M+ ++
Sbjct: 696 -SRDIVSWNKIIAG---YAQNGLGQTAVEFAYQMQEQD 729
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 260/541 (48%), Gaps = 47/541 (8%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMM 149
+Y A++ L A+++ QM + D+ N++I+ YV+ +S+ A +F+ M
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA- 204
P+RDV+SWN+++S YAQ G+ A ++F+ M N+I++ +L A +E
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 205 ---CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ ++ + NSL+ + K L A+ +F + RD VS+NTM+ YAQ
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 262 YLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
Y+ E LF E D T+ ++ + +DE + I E+ S
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS------ 262
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
++ ++T + G++ A+ F D + + A+
Sbjct: 263 ---------------------DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNAL 301
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IA AQ G++ ++ + M+ G LNR+ + S+L+ C+ +LE GK +H + + G
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ +GNAL+ MY +CG + +A F + +D+ISWN +IAGYAR +A+ L++
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M++ G+KP +T + +LSAC+++ G + R G+ N ++++ R G
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCG 480
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF--EMEPENAGMYVLL 615
L EAQN+ + D +W +++ +G E A K + + E+EP+N +L
Sbjct: 481 SLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 616 S 616
S
Sbjct: 540 S 540
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/734 (38%), Positives = 427/734 (58%), Gaps = 51/734 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y G L A VFD+MP + SWN +ISGY + + +R L MP D V
Sbjct: 49 NNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV 108
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA----CML 207
SW ++ GY Q G D A +F +M+ + ++ + + +L++ N ++ +
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ V SL+ + K AK +FDRM V++ +WN +I+ Y Q+ A
Sbjct: 169 VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA 228
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS--------- 311
FE+ P +D+ +W +M+SGY Q G EA +IF M P+ T++
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANL 288
Query: 312 ------------------------WNAMIAGYVQTKRMDMARELFE--AMTCKNVASWNT 345
NA+I+ Y ++ +++AR + E + N+ ++ +
Sbjct: 289 EKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTS 348
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ GY + G + AR +F+++ D ++W A+I GY Q+G D+L LF M G N
Sbjct: 349 LLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPN 408
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
++LS ++L LE GKQ+H +K G + V NAL+ MY K G++ A F+
Sbjct: 409 SYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD 468
Query: 466 -EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
K+++SW +MI A+HG GK+A+ LFE M +VG+KPD IT VG+LSAC+H GLVE
Sbjct: 469 LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVE 528
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G +Y+ M + + P HY CM+DL GRAG L EA +++MP EPD WG+LL +
Sbjct: 529 QGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLAS 588
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+++ +LA+ AAE + ++P N+G Y+ L+N+Y+A G+W + ++ R M+DRGV+K
Sbjct: 589 CKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEK 648
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW+ ++N+VH F V D +HP+KD IY + E+ ++K+ GF+ T+ VLHD+ EE KE
Sbjct: 649 GISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKE 708
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
+L+YHSEKLA+A+G+L+ P +R+MKNLRVC DCH+AIK ISK+VGR II+RD RF
Sbjct: 709 QILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRF 768
Query: 765 HHFSGGSCSCGDYW 778
HHF GSCSC DYW
Sbjct: 769 HHFKDGSCSCRDYW 782
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 191/449 (42%), Gaps = 86/449 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
+I WN I+ +M++G + A F MP R VS+N+MISGY G A +F +M
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKM- 265
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQ 166
L ++ + LSA NL ++ + + ++ N ++S YA+
Sbjct: 266 ---LNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAK 322
Query: 167 NGYADAARRIFD--RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
+G + AR I + R N I++ LL Y + G ++ A +F + +VV+W +++
Sbjct: 323 SGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIV 382
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G+V+ DA +F M E P + +T AM
Sbjct: 383 GYVQNGLWNDALELFRLM---------------------------VNEGPEPNSYTLAAM 415
Query: 285 VS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+S +++GK A I +V+ NA+IA Y +T +++A+ +F+ K
Sbjct: 416 LSVSSSLTILEHGKQIHASAIKAGESSTPSVT-NALIAMYAKTGNINVAKRVFDLPNGKK 474
Query: 340 -VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ SW +MI AQ G A NLF+RM
Sbjct: 475 EIVSWTSMIMALAQHGLGKEAINLFERMLS------------------------------ 504
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYCKCGSV 457
G + + + VLS C ++ +E G++ + + +V A ++ +Y + G +
Sbjct: 505 -VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLL 563
Query: 458 EEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+EAY E + ++ D I+W +++A H
Sbjct: 564 QEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 33/222 (14%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F +L T + G+ +H Q++K G G ++ N L+ Y K GS+ A+H F+E+
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 469 DKDVISWNTMIAGYARHG-----------------------------FG--KDALMLFES 497
K SWNT+I+GYA+ G FG +A+ +F
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M + + P T+ +LS+C+ ++ G + +S G+ T ++++ + G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRK-IHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
A+ + M + + +TW AL+ G+ ELA E
Sbjct: 192 DPVIAKVVFDRMTVK-NISTWNALISLYMQSGQFELAASQFE 232
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVF----NSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
D D+ W I +++NG + AL +F N P +S + AM+S L+ +Q
Sbjct: 371 DRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 114 VFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMP--KRDVVSWNTMLSGYAQN 167
+ + S N +I+ Y + +++ A+ +F+ +P K+++VSW +M+ AQ+
Sbjct: 431 IHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQH 489
Query: 168 GYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVS- 218
G A +F+RML + + I++ G+L+A G +E+ M+ E +S
Sbjct: 490 GLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSH 549
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEA 273
+ ++ + + L +A + MP+ D ++W +++ +N LA+ A+RL
Sbjct: 550 YACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID 609
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VSW 312
P + + A+ + Y GK + A M ++ +SW
Sbjct: 610 P-GNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISW 652
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVA 67
+Q+H+S I + + P+ TN + ++N R P G +I W
Sbjct: 429 KQIHASAIKAGESST------PSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSM 482
Query: 68 ITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVFDQMP---- 119
I ++G A+++F M + ++Y ++S G ++ R+ ++ M
Sbjct: 483 IMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHE 542
Query: 120 -QRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIF 177
+ L + MI Y R L A E MP + D ++W ++L+ + AD A+
Sbjct: 543 IEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAA 602
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
+R+L + G AY+ + AC +E+ A
Sbjct: 603 ERLLLIDP----GNSGAYLALANVYSACGKWENAA 633
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/590 (45%), Positives = 375/590 (63%), Gaps = 3/590 (0%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMPVRDEVSW 250
+AA V+ G + A F S ++N L+ G+ + RL DA+ +FDR+P D VS+
Sbjct: 24 VAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSY 83
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
NT+++ + + A+RLF PV+DV +W MVSG ++G V+EA+ +F AMP +N+V
Sbjct: 84 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSV 143
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQH 369
SWNAM++G+ ++ M A E F K A W M++GY G + A F+ MP
Sbjct: 144 SWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVR 203
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQL 428
+ +SW A++AGY ++ +++D+LRLF M R + N S +SVL C+NL++L GKQ+
Sbjct: 204 NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI 263
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H +K+ VG +L+ MYCKCG + A F E+ +DV++WN MI+GYA+HG G
Sbjct: 264 HQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDG 323
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A+ LFE MK G++P+ IT V +L+AC HTGL + G F M YG+ P HY+C
Sbjct: 324 KEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSC 383
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLL RAG+L+ A +L+++MPFEP + +G LL ACR+Y E AE AA + E +P++
Sbjct: 384 MVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQS 443
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
AG YV L+N+YA + +W DVS+VR M+D V K GYSW+E++ +H F D LHP+
Sbjct: 444 AGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQL 503
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
I+ L +L ++K G+V VLHDV E K ML HSEKLA+++G++S G
Sbjct: 504 YLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMT 563
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+R+ KNLRVC DCHNA K ISKI R IILRD RFHHF GG CSCGDYW
Sbjct: 564 LRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 191/353 (54%), Gaps = 16/353 (4%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-GQLDPARQVFDQMPQRDL 123
VA+ +R G A F S PR+++ +YN +++GY G+L AR +FD++P D
Sbjct: 21 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 80
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
VS+N ++S + + AR LF MP RDVVSWNTM+SG +++G + A+ +F M +
Sbjct: 81 VSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR 140
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
N +SWN +++ + + + A F + + V W +++ G++ + A F+ M
Sbjct: 141 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 200
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEA 297
PVR+ VSWN ++ GY +N++ +A RLF EA V+ + T ++++ G +
Sbjct: 201 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 260
Query: 298 RMIFD---AMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
+ I +P +N ++++ Y + + A +LF M ++V +WN MI+GYAQ
Sbjct: 261 KQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQH 320
Query: 354 GEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YG 401
G+ A NLF+RM + + I++ A++ +G + +R F M+ YG
Sbjct: 321 GDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYG 373
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 39/374 (10%)
Query: 13 SCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHM 72
+C+L + +++ RL RHL + P P D +N ++ H
Sbjct: 52 NCLLAGYARALGRLAD-------------ARHLFDR---IPTP----DAVSYNTLLSCHF 91
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
+G D A +F SMP R VS+N M+SG +G ++ A+ VF MP R+ VSWN M+SG
Sbjct: 92 ASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSG 151
Query: 133 YVRNKSLSAARNLFEMMPKR-DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
+ ++ +SAA F P++ D V W M+SGY G A F+ M +N +SWN +
Sbjct: 152 FACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAV 211
Query: 192 LAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMP 243
+A YV+N ++A LF E+ + +S++ G LG K I ++P
Sbjct: 212 VAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLP 271
Query: 244 V-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ R+ ++++ Y + L+ A +LF E +DV W AM+SGY Q+G EA +F+
Sbjct: 272 LSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFE 331
Query: 303 AMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQS 353
M E N +++ A++ + T D FE M V ++ M+ ++
Sbjct: 332 RMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRA 391
Query: 354 GEITHARNLFDRMP 367
G++ A +L MP
Sbjct: 392 GKLERAVDLIRSMP 405
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 191/376 (50%), Gaps = 26/376 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A H+F+ +P +VSYN ++S + +G D AR++F MP RD+VSWN M+SG ++ ++
Sbjct: 68 ARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAV 127
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE-ISWNGLLAAYVQN 198
A+ +F MP R+ VSWN M+SG+A + AA F EK + + W +++ Y+
Sbjct: 128 EEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDI 187
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN-----TM 253
G + +A FE+ +VSWN+++ G+VK DA +F M V N ++
Sbjct: 188 GNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSV 247
Query: 254 ITGYAQNNYLAEAQRLFE---EAPV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
+ G + + L +++ + + P+ +++ T++VS Y + G + A +F M ++
Sbjct: 248 LLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDV 307
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMI---TGYAQSGEITHARNLFDR 365
V+WNAMI+GY Q A LFE M + V +W T + T +G F+
Sbjct: 308 VAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEG 367
Query: 366 M-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
M P+ D ++ ++ ++G E ++ L M + S + ++L+ C
Sbjct: 368 MQELYGIEPRVD--HYSCMVDLLCRAGKLERAVDLIRSMPF---EPHPSAYGTLLAACRV 422
Query: 419 LASLELGKQLHGQLVK 434
+LE + G+L++
Sbjct: 423 YKNLEFAELAAGKLIE 438
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 25/310 (8%)
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT-KRMDMARELFEAMTCKNV 340
T V+ V+ G + A F + P K T ++N ++AGY + R+ AR LF+ + +
Sbjct: 21 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 80
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
S+NT+++ + SG+ AR LF MP D +SW +++G ++SG E++ +F+ M
Sbjct: 81 VSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAM--- 137
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHG--QLVKVGFEAG-CFVGNALLVMYCKCGSV 457
P + +S A ++ + + + + E G + A++ Y G+V
Sbjct: 138 -------PVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNV 190
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSA 516
+A FE + ++++SWN ++AGY ++ DAL LF +M + ++P+ T+ +L
Sbjct: 191 VKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLG 250
Query: 517 CSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTC---MVDLLGRAGRLDEAQNLMKNMPFE 572
CS+ + G + + + M +P S++ T +V + + G L A L M
Sbjct: 251 CSNLSALGFGKQIHQWCMK-----LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM-HT 304
Query: 573 PDAATWGALL 582
D W A++
Sbjct: 305 RDVVAWNAMI 314
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 20/193 (10%)
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH-GFGKDALMLFESMK 499
C + + + G + A AF K ++N ++AGYAR G DA LF+ +
Sbjct: 17 CSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIP 76
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
T PD ++ +LS +G + F SM + + + MV L ++G +
Sbjct: 77 T----PDAVSYNTLLSCHFASGDADGARRLFASMP-----VRDVVSWNTMVSGLSKSGAV 127
Query: 560 DEAQNLMKNMPFEPDAATWGALLG--ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
+EA+ + MP ++ +W A++ AC AAE F PE G VL +
Sbjct: 128 EEAKAVFLAMPVR-NSVSWNAMVSGFAC------SRDMSAAEEWFRNAPEK-GDAVLWTA 179
Query: 618 LYAASGRWGDVSK 630
+ + G+V K
Sbjct: 180 MVSGYMDIGNVVK 192
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 288/770 (37%), Positives = 426/770 (55%), Gaps = 77/770 (10%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ S + ++ N +I+ Y + + AR++FD++P+ D+V+ ++S Y + ++
Sbjct: 30 HILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKL 89
Query: 142 ARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY 195
A+ LF P RD VS+N M++ Y+ AA +F +M + +++ +L+A
Sbjct: 90 AQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSAL 149
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLM-----------------GGFVKQKRL-GDAKW 237
E C + + EV+ +L+ VK +L A+
Sbjct: 150 SLIADEERHCQML----HCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARK 205
Query: 238 IFDRMPVRD--EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
+FD P E SW TMI GY +N+ L A+ L + W AM+SGYV+ G +
Sbjct: 206 VFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYE 265
Query: 296 EARMIFDAM---------------------------------------------PEKNTV 310
EA F M P + V
Sbjct: 266 EAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFV 325
Query: 311 SW--NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
NA+I Y + RM AR +F+ M +++ SWN +++GY + I A ++F MP+
Sbjct: 326 LSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPE 385
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ ++W +I+G AQ+G+ E+ L+LF +MK G F ++ C+ L SL+ G+Q+
Sbjct: 386 RNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQI 445
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H Q++++G ++G GNAL+ MY +CG VE A F + D +SWN MIA A+HG G
Sbjct: 446 HSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHG 505
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
A+ LFE M I PD IT + IL+AC+H GL+++G YF +M YG+ P HY
Sbjct: 506 VKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYAR 565
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
++DLL RAG +AQ+++K+MPFE A W ALL CR++G EL +AA+ + E+ P
Sbjct: 566 LIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQ 625
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G Y++LSN+YAA G+W +V++VRL MR+RGVKK G SW+EV+N VH F V D HPE
Sbjct: 626 DGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEV 685
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
+Y YL++L ++K+ G+V TK VLHD+ E KEH L HSEKLAV YGI+ +P G
Sbjct: 686 QAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGAT 745
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IRV KNLR+C DCHNA K+ISK+V R I++RD RFHHF G CSCG+YW
Sbjct: 746 IRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 171/438 (39%), Gaps = 101/438 (23%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP---- 119
W I ++RN +A + + + V++NAMISGY+ G + A F +M
Sbjct: 220 WTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGI 279
Query: 120 QRDLVSW-------------------------------------------NVMISGYVRN 136
Q D ++ N +I+ Y +
Sbjct: 280 QEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKY 339
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ AR +F+ MP RD++SWN +LSGY + A IF M E+N ++W +++
Sbjct: 340 DRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLA 399
Query: 197 QNGRIEE-------------------------ACMLFESKANWEVV-------------- 217
QNG EE AC + S N + +
Sbjct: 400 QNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLS 459
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+ N+L+ + + + A+ +F MP D VSWN MI AQ+ + +A LFE+ +D
Sbjct: 460 AGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKED 519
Query: 278 VF----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMA 328
+ T+ +++ G + E R FD M + ++ + +I + A
Sbjct: 520 ILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKA 579
Query: 329 RELFEAMTCKNVAS-WNTMITGYAQSGE----ITHARNLFDRMPQHDCISWAAIIAGYAQ 383
+ + ++M + A W ++ G G I A L + +P D ++ + YA
Sbjct: 580 QSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDG-TYIILSNMYAA 638
Query: 384 SGYSEDSLRLFIEMKRYG 401
G ++ R+ + M+ G
Sbjct: 639 LGQWDEVARVRLLMRERG 656
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 122/301 (40%), Gaps = 54/301 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI WN ++ ++ + A +F+ MP R+ +++ MISG NG + ++F+QM
Sbjct: 356 DIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMK 415
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
L + N +I+ Y R +
Sbjct: 416 SEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVE 475
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
+A ++F MP D VSWN M++ AQ+G+ A +F++M+++ + I++ +L A
Sbjct: 476 SAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACN 535
Query: 197 QNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-W 250
G I+E F++ ++ + L+ + A+ + MP W
Sbjct: 536 HAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIW 595
Query: 251 NTMITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++ G + + A RL E P +D T+ + + Y G+ DE + M E
Sbjct: 596 EALLAGCRIHGNMELGIQAADRLLELIPGQD-GTYIILSNMYAALGQWDEVARVRLLMRE 654
Query: 307 K 307
+
Sbjct: 655 R 655
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
RY +LN T +++ + +H ++ GF+ F+ N L+ +YCK ++
Sbjct: 9 RYLTQLNHVSTTQIIA-----------RAVHAHILTSGFKPNTFILNRLINIYCKSSNIT 57
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A F++I D+++ T+++ Y+ G K A LF + + I+ D ++ +++A S
Sbjct: 58 YARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNA-TPLTIR-DTVSYNAMITAYS 115
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
H F M R YG +P+ ++ ++ L
Sbjct: 116 HGNDGHAALNLFVQMKR-YGFLPDPFTFSSVLSAL 149
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 290/812 (35%), Positives = 443/812 (54%), Gaps = 94/812 (11%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN----GQLDPARQVFD 116
+ WN + +++ G + AL + M + I +L + G L+ R++
Sbjct: 91 VHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHF 150
Query: 117 QMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
Q Q D+ N +++ Y + S+ AR +F+ M K+ VVSW + GYA G ++
Sbjct: 151 QAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSET 210
Query: 173 ARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMG 224
A IF +M ++ N I++ +L A+ ++ + + + +L+
Sbjct: 211 AFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVK 270
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP---------- 274
+ K D + +F+++ RD ++WNTMI G A+ Y EA ++ +
Sbjct: 271 MYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKIT 330
Query: 275 -----------------------------VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D+ A++S Y + G + +AR++FD M
Sbjct: 331 YVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMV 390
Query: 306 EKNTVSWNAMIAGYVQT----------KRMDMA--------------------------- 328
K+ +SW AMI G ++ + M A
Sbjct: 391 RKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRR 450
Query: 329 --RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+++ EA + NT++ Y+ G + AR +FDRM Q D +++ A+I GYA
Sbjct: 451 IHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNL 510
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+++L+LF ++ G + ++ + ++L+ CAN SLE +++H + K GF + VGNA
Sbjct: 511 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNA 570
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ Y KCGS +A FE++ ++VISWN +I G A+HG G+DAL LFE MK G+KPD
Sbjct: 571 LVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPD 630
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T V +LSACSH GL+E+G YF SM++D+ +IP +HY CMVDLLGRAG+LDEA+ L+
Sbjct: 631 IVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALI 690
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
K MPF+ + WGALLGACR++G +AE+AAE +++ +NA +YV LS++YAA+G W
Sbjct: 691 KTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWD 750
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+K+R M RGV K G SW++V +K+H F D HP+ ++IYA L+ L +K G
Sbjct: 751 SAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKG 810
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T+ V+HDV E EKE+ + +HSE+LA+AYG++S P G I + KNLRVC DCH A K
Sbjct: 811 YVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATK 870
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKIV R II RD NRFHHF G CSCGDYW
Sbjct: 871 FISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/642 (26%), Positives = 301/642 (46%), Gaps = 95/642 (14%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNV 128
++G D ++ + +S Y M+ + L RQV + Q D + N
Sbjct: 4 KDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA 63
Query: 129 MISGYVRNKSLSAARNLFEMMP--KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK--- 183
+I+ Y++ S+ AR +++ + +R V SWN M+ GY Q GY + A ++ +M +
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 184 ----------------NEISW--------------------NGLLAAYVQNGRIEEACML 207
+ W N +L Y + G IEEA +
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREV 183
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYL 263
F+ VVSW +GG+ R A IF +M V + +++ +++ ++ L
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243
Query: 264 ----AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
A R+ D TA+V Y + G + R +F+ + ++ ++WN MI G
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 303
Query: 320 VQTKRMDMARELFEAM-----------------TCKNVAS--W----------------- 343
+ + A E++ M C N A+ W
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363
Query: 344 ---NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
N +I+ Y++ G I AR +FD+M + D ISW A+I G A+SG+ ++L ++ EM++
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQA 423
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
G NR +TS+L+ C++ A+LE G+++H Q+V+ G VGN L+ MY CGSV++A
Sbjct: 424 GVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDA 483
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F+ ++ +D++++N MI GYA H GK+AL LF+ ++ G+KPD +T + +L+AC+++
Sbjct: 484 RQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANS 543
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
G +E E +++ R G ++ +V + G +A + + M + + +W A
Sbjct: 544 GSLEWARE-IHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNA 601
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
++G +G+ + A + E + +ME + +S L A S
Sbjct: 602 IIGGSAQHGRGQDALQLFERM-KMEGVKPDIVTFVSLLSACS 642
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 177/349 (50%), Gaps = 17/349 (4%)
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNT 345
++G VD + + + N+ + M+ ++ K + R++ + + T + + N
Sbjct: 4 KDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA 63
Query: 346 MITGYAQSGEITHARNLFDRMP--QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+I Y Q G I AR ++ ++ + SW A++ GY Q GY E +L+L +M+++G
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+R+ S LS+C + +LE G+++H Q ++ G V N +L MY KCGS+EEA
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREV 183
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+++ K V+SW I GYA G + A +F+ M+ G+ P+ IT + +L+A S +
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+ G + +S + G ++ T +V + + G + + + + + D W ++G
Sbjct: 244 KWG-KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIG 301
Query: 584 ACRLYGKTELAEKAAEVIFEMEPE----NAGMYVLLSN--LYAASGRWG 626
G E+A+EV +M+ E N YV+L N + +A+ WG
Sbjct: 302 GLAEGG---YWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG 347
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/734 (38%), Positives = 426/734 (58%), Gaps = 51/734 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y G L A VFD+MP + SWN +ISGY + + +R L MP D V
Sbjct: 49 NNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV 108
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESK 211
SW ++ GY Q G D A +F +M+ + ++ + + +L++ N ++ +
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168
Query: 212 ANWEVVSW----NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ S SL+ + K AK +FDRM V++ +WN +I+ Y Q+ A
Sbjct: 169 VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA 228
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS--------- 311
FE+ P +D+ +W +M+SGY Q G EA IF M P+ T++
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANL 288
Query: 312 ------------------------WNAMIAGYVQTKRMDMARELFE--AMTCKNVASWNT 345
NA+I+ Y ++ +++AR + E + N+ ++ +
Sbjct: 289 EKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTS 348
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ GY + G + AR +F+++ D ++W A+I GY Q+G D+L LF M G N
Sbjct: 349 LLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPN 408
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
++LS ++L LE GKQ+H +K G + V NAL+ MY K G++ A F+
Sbjct: 409 SYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD 468
Query: 466 -EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
K+++SW +MI A+HG GK+A+ LFE M +VG+KPD IT VG+LSAC+H GLVE
Sbjct: 469 LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVE 528
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G +Y+ M + + P HY CM+DL GRAG L EA +++MP EPD WG+LL +
Sbjct: 529 QGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLAS 588
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+++ +LA+ AAE + ++P N+G Y+ L+N+Y+A G+W + ++ R M+DRGV+K
Sbjct: 589 CKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEK 648
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW+ ++N+VH F V D +HP+KD IY + E+ ++K+ GF+ T+ VLHD+ EE KE
Sbjct: 649 GISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKE 708
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
+L+YHSEKLA+A+G+L+ P +R+MKNLRVC DCH+AIK ISK+VGR II+RD RF
Sbjct: 709 QILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRF 768
Query: 765 HHFSGGSCSCGDYW 778
HHF GSCSC DYW
Sbjct: 769 HHFKDGSCSCRDYW 782
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 191/449 (42%), Gaps = 86/449 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
+I WN I+ +M++G + A F MP R VS+N+MISGY G A +F +M
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKM- 265
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQ 166
L ++ + LSA NL ++ + + ++ N ++S YA+
Sbjct: 266 ---LNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAK 322
Query: 167 NGYADAARRIFD--RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
+G + AR I + R N I++ LL Y + G ++ A +F + +VV+W +++
Sbjct: 323 SGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIV 382
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G+V+ DA +F M E P + +T AM
Sbjct: 383 GYVQNGLWNDALELFRLM---------------------------VNEGPEPNSYTLAAM 415
Query: 285 VS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+S +++GK A I +V+ NA+IA Y +T +++A+ +F+ K
Sbjct: 416 LSVSSSLTILEHGKQIHASAIKAGESSTPSVT-NALIAMYAKTGNINVAKRVFDLPNGKK 474
Query: 340 -VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ SW +MI AQ G A NLF+RM
Sbjct: 475 EIVSWTSMIMALAQHGLGKEAINLFERMLS------------------------------ 504
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYCKCGSV 457
G + + + VLS C ++ +E G++ + + +V A ++ +Y + G +
Sbjct: 505 -VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLL 563
Query: 458 EEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+EAY E + ++ D I+W +++A H
Sbjct: 564 QEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 33/222 (14%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F +L T + G+ +H Q++K G G ++ N L+ Y K GS+ A+H F+E+
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 469 DKDVISWNTMIAGYARHG-----------------------------FG--KDALMLFES 497
K SWNT+I+GYA+ G FG +A+ +F
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M + + P T+ +LS+C+ ++ G + +S G+ T ++++ + G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRK-IHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
A+ + M + + +TW AL+ G+ ELA E
Sbjct: 192 DPVIAKVVFDRMTVK-NISTWNALISLYMQSGQFELAASQFE 232
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVF----NSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
D D+ W I +++NG + AL +F N P +S + AM+S L+ +Q
Sbjct: 371 DRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 114 VFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMP--KRDVVSWNTMLSGYAQN 167
+ + S N +I+ Y + +++ A+ +F+ +P K+++VSW +M+ AQ+
Sbjct: 431 IHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQH 489
Query: 168 GYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVS- 218
G A +F+RML + + I++ G+L+A G +E+ M+ E +S
Sbjct: 490 GLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSH 549
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEA 273
+ ++ + + L +A + MP+ D ++W +++ +N LA+ A+RL
Sbjct: 550 YACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID 609
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VSW 312
P + + A+ + Y GK + A M ++ +SW
Sbjct: 610 P-GNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISW 652
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVA 67
+Q+H+S I + + P+ TN + ++N R P G +I W
Sbjct: 429 KQIHASAIKAGESST------PSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSM 482
Query: 68 ITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVFDQMP---- 119
I ++G A+++F M + ++Y ++S G ++ R+ ++ M
Sbjct: 483 IMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHE 542
Query: 120 -QRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIF 177
+ L + MI Y R L A E MP + D ++W ++L+ + AD A+
Sbjct: 543 IEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAA 602
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
+R+L + G AY+ + AC +E+ A
Sbjct: 603 ERLLLIDP----GNSGAYLALANVYSACGKWENAA 633
>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
Length = 912
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/754 (36%), Positives = 431/754 (57%), Gaps = 46/754 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN IT + N A VF+ P R +S+NAM++ Y +G LD A++VFD+ P
Sbjct: 170 NVISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTP 229
Query: 120 QRDLVSWNVMISG-------------------------------YVRNKSLSAARNLFEM 148
Q+D+VS +MI Y+ + A NL
Sbjct: 230 QQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRR 289
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN-EISWNGLLAAYVQNGRIEEACML 207
MP++D W +MLS Y+++G + ARRIFDR ++ E+SWN LL+AY Q G + A
Sbjct: 290 MPQQDPTLWTSMLSAYSRHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLARST 349
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
FE +VV+W +L+ + +L +A+ ++D +P RD V+W +I Y N L E++
Sbjct: 350 FERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGKLTESK 409
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
R++ P ++ + TAM+ Y QNG+V +AR + D +P+ + + +MI Y Q +
Sbjct: 410 RVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKD 469
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
ARE+F+++ +V + N M+ Y+ + + HA+ +FD + Q +SW ++A YAQ+G
Sbjct: 470 AREMFDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNL 529
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF---EAGCFVG 444
+++ +F + P +V+S + + L + ++ + E
Sbjct: 530 DEAKSIF----------DSIPHKNVVSHNVMIVAYAHNMDL-AEARRIFYSMDEKDTVTW 578
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
A++ M + G + EA F ++ ++V+SWN++IAG A G G A+ M+ G K
Sbjct: 579 TAMVAMVAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAK 638
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD IT +GIL ACSH GLVE+G +F SM D+G+IP +HY MVD+LGRAG+L A+
Sbjct: 639 PDHITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARE 698
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
L++ MPF PD WG+LLG+C+ + +L +AAE + + + +++G YVLL+N+Y++ GR
Sbjct: 699 LLETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGR 758
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
D VR +M+ RGVKK G S + V +H F G+ HP I + L L+ +K+
Sbjct: 759 VADALAVRNRMKARGVKKQPGVSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKK 818
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
G+ TK VLH + +EEKE +L YHSEKLA+A+ ++ G PIR+MKNLRVC DCH A
Sbjct: 819 AGYQPDTKAVLHSILDEEKEVLLSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTA 878
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K +SK++ R II+RD RFH+F G+CSCGDYW
Sbjct: 879 TKFLSKLLQREIIVRDGYRFHNFENGTCSCGDYW 912
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 166/577 (28%), Positives = 296/577 (51%), Gaps = 22/577 (3%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+ I + + D A VFN +P + S ++ Y NG L A+ +FDQ+P ++V
Sbjct: 51 NLIIQMYGKCSRIDDAQAVFNELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVV 110
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
SWN +I+G+ ++ +S A +F MP+ SWN+M++GYAQ+G +A +FDR E N
Sbjct: 111 SWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPEHN 170
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
ISWN L+ Y N I EA +F+ + +SWN+++ + + L AK +FDR P
Sbjct: 171 VISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTPQ 230
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+D VS MI A L A +F P ++ +++ M+ Y+ GK+ EA + M
Sbjct: 231 QDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRM 290
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFE-AMTCKNVASWNTMITGYAQSGEITHARNLF 363
P+++ W +M++ Y + ++ AR +F+ A + SWN +++ YAQ+G + AR+ F
Sbjct: 291 PQQDPTLWTSMLSAYSRHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLARSTF 350
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
+RMP+HD ++W A+IA Q+G E++ L+ ER + +T+++ L
Sbjct: 351 ERMPRHDVVAWTALIAVSGQNGQLEEAEVLY---DLIPER-DLVAWTALIQAYGVNGKLT 406
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
K+++ + E A+++ Y + G V +A + + D D + +MI YA
Sbjct: 407 ESKRVYALMP----ERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYA 462
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
++G+ KDA +F+S+K PD I ++ A S +++ F S+ + V N+
Sbjct: 463 QNGYIKDAREMFDSIKN----PDVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNT 518
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
MV +AG LDEA+++ ++P + + + ++ A Y +A + +
Sbjct: 519 -----MVAAYAQAGNLDEAKSIFDSIPHK-NVVSHNVMIVA---YAHNMDLAEARRIFYS 569
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
M+ ++ + + + A GR + ++ KM R V
Sbjct: 570 MDEKDTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNV 606
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 258/521 (49%), Gaps = 24/521 (4%)
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
Q+ D + +L N++I Y + + A+ +F +P+ +V S ++ Y++NG +
Sbjct: 37 QIADGEHRGNLFLQNLIIQMYGKCSRIDDAQAVFNELPEPNVFSRCILMQAYSENGDLGS 96
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
A+ IFD++ N +SWN L+A + Q+G + A +F W SWNS++ G+ + L
Sbjct: 97 AKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMITGYAQSGDL 156
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
A +FDR P + +SWN +ITGY+ N + EA+ +F+ AP +D +W AM++ Y Q+G
Sbjct: 157 ASATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSG 216
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+D A+ +FD P+++ VS MI + + A E+F AM +N S++ MI Y
Sbjct: 217 DLDSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYID 276
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G+I A NL RMPQ D W ++++ Y++ G E++ R+F R R + + ++
Sbjct: 277 QGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIF---DRAARRDDEVSWNAL 333
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
LS A L L + ++ + A AL+ + + G +EEA ++ I ++D+
Sbjct: 334 LSAYAQAGHLHLARSTFERMPRHDVVA----WTALIAVSGQNGQLEEAEVLYDLIPERDL 389
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD--DITMVGILSACSHTGLVEKGTEYF 530
++W +I Y +G L ES + + P+ ++ ++ A S G V + +
Sbjct: 390 VAWTALIQAYGVNG------KLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKML 443
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
++ P+ T M+ + G + +A+ + ++ PD A++ A Y
Sbjct: 444 DTLPD-----PDQSTRTSMIVAYAQNGYIKDAREMFDSIK-NPDVIACNAMMEA---YSS 494
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
++ + A + ++ + + + YA +G + +
Sbjct: 495 AQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSI 535
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 111/286 (38%), Gaps = 63/286 (22%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
++ + + +C L G+++H Q+ F+ N ++ MY KC +++A F
Sbjct: 12 QNALATAIRSCGIAKDLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKCSRIDDAQAVFN 71
Query: 466 E-------------------------------IVDKDVISWNTMIAGYARHGFGKDALML 494
E I +V+SWN++IAG+++HGF +A +
Sbjct: 72 ELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEI 131
Query: 495 FESMKTVGIKPDDITMVGILSA---CSHTGLVEKGTEY----------FYSMNRDYGVIP 541
F M + + G + S T + ++ E+ YS NR +IP
Sbjct: 132 FARMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVISWNALITGYSDNR---MIP 188
Query: 542 NSK------------HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+K + M+ ++G LD A+ + P + D + ++ AC +
Sbjct: 189 EAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTP-QQDIVSCTLMIKACAV-- 245
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
E+ A E+ M NA Y + +Y G+ G+ + +M
Sbjct: 246 -QEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRM 290
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 284/782 (36%), Positives = 437/782 (55%), Gaps = 91/782 (11%)
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
FN RS N ++ +L G L+ AR++FD+MP +++ S N MI GY+++ +LS AR
Sbjct: 97 FNPNTYRS----NFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEAR 152
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNG 199
LF+ M +R V+W ++ GYAQN A +F M ++ + +S LL+ + +
Sbjct: 153 TLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFD 212
Query: 200 RIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ E + + + +V NSL+ + K + LG A +F+ +P RD V++N ++T
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLT 272
Query: 256 GYAQNNYLAEAQRLFEEAP---------------------------------------VK 276
GY++ + EA LF + V
Sbjct: 273 GYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVW 332
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
+VF A++ Y ++ +V EA +F MPE + +S+N ++ Y R+ + ELF+ +
Sbjct: 333 NVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQ 392
Query: 336 ------------TCKNVASW--------------------------NTMITGYAQSGEIT 357
T ++A+ N+++ YA+ GE
Sbjct: 393 FTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFG 452
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F + + W A+I+ Y Q G ED L+LF+EM+R + + + S++ CA
Sbjct: 453 EANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACA 512
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+LASL LGKQLH ++ G+ + F G+AL+ MY KCGS+++A F+E+ ++ +SWN
Sbjct: 513 SLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNA 572
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I+ YA++G G L LFE M G++PD ++++ IL ACSH GLVE+G +YF SM R Y
Sbjct: 573 LISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIY 632
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
++P +HY +D+L R GR DEA+ LM MPFEPD W ++L +C ++ ELA+KA
Sbjct: 633 KLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKA 692
Query: 598 AEVIFEMEP-ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
A +F M+ +A YV +SN+YAA+G W +V KV+ MR+RGVKKV YSW+E+++K H
Sbjct: 693 ANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTH 752
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
F+ D HP+ I L+ELE K+ + G+ + LH+V EE K L+YHSE++A+
Sbjct: 753 VFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAI 812
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+ ++S P G PI VMKNLR C DCH AIK ISKIV R I +RD++RFHHF G C+C D
Sbjct: 813 AFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRD 872
Query: 777 YW 778
YW
Sbjct: 873 YW 874
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 155/346 (44%), Gaps = 26/346 (7%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
W++ N + + ++ A +F MP +SYN +++ Y NG++ + ++F ++
Sbjct: 332 WNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKEL 391
Query: 119 P----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYA 170
R + ++S + +L R + D +S N+++ YA+ G
Sbjct: 392 QFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEF 451
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGF 226
A RIF + ++ + W ++++YVQ G E+ LF +K + ++ S++
Sbjct: 452 GEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRAC 511
Query: 227 VKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
L K + + + + S + ++ YA+ + +A ++F+E PV++ +W
Sbjct: 512 ASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWN 571
Query: 283 AMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMT-- 336
A++S Y QNG D +F+ M + ++VS +++ ++ + F++MT
Sbjct: 572 ALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRI 631
Query: 337 ---CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
+ + I + G A L +MP + D I W++++
Sbjct: 632 YKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVL 677
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 64/297 (21%)
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR--------LFIEMKRYGER---LNRSP 408
+NLF Q++C ++ G++ DS++ +F +G + L S
Sbjct: 8 KNLF----QNECRMIPLLLDGWSNYLNKNDSIKVWTCVICLIFTNAGHFGSKQYELTLSL 63
Query: 409 FTSVLSTCA-NLASLELGKQLH----GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+++ C NL + + H ++K GF + N L+ + + G + A
Sbjct: 64 MNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKL 123
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM--KTV-------------------- 501
F+E+ K++ S NTMI GY + G +A LF+SM +T
Sbjct: 124 FDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAF 183
Query: 502 ---------GIKPDDITMVGILSACSH---TGLVEKGTEYFYSMNRDYG-VIPNSKHYTC 548
GI PD +++ +LS + V + + + D V+ NS
Sbjct: 184 GLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNS----- 238
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
++D + L A L ++P E D+ T+ ALL Y K +A + F+M+
Sbjct: 239 LLDSYCKTRSLGLAFQLFNDIP-ERDSVTFNALLTG---YSKEGFNREAINLFFKMQ 291
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 311/845 (36%), Positives = 443/845 (52%), Gaps = 126/845 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+R + +++ G D A +F+ M R+ +S+ MI G G+ A F QM
Sbjct: 64 DVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQ 123
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
+ DL N ++ Y ++ S+
Sbjct: 124 REGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSID 183
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLL--AA 194
AR +F+ M +RD+ SW M+ G AQ+G A +F +M N ++ +L +A
Sbjct: 184 DARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASA 243
Query: 195 YVQNGRIEEACMLFESKANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
G +E + + +S N+L+ + K + DA+ +FD M RD +SW
Sbjct: 244 ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISW 303
Query: 251 NTMITGYAQNNYLAEAQRLF---------------------------------------E 271
N MI G AQN EA +F E
Sbjct: 304 NAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVE 363
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK-------- 323
V D+ +A V Y++ G +D+A++IFD + +N +WNAMI G Q K
Sbjct: 364 VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSL 423
Query: 324 RMDMARELF--EAMTCKNVAS---------W-------------------NTMITGYAQS 353
+ M RE F +A T N+ S W N ++ YA+
Sbjct: 424 FLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKC 483
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G +A+ +FD M + + +W +I+G AQ G ++ LF++M R G + + + S+L
Sbjct: 484 GNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSIL 543
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S CA+ +LE K++H V G + VGNAL+ MY KCGSV++A F++++++DV
Sbjct: 544 SACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVY 603
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SW MI G A+HG G DAL LF MK G KP+ + V +LSACSH GLV++G F S+
Sbjct: 604 SWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSL 663
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+DYG+ P +HYTCMVDLLGRAG+L+EA++ + NMP EP A WGALLGAC YG E+
Sbjct: 664 TQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEM 723
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
AE AA+ +++P++A YVLLSN+YAA+G W VR M+ RG++K G SW+EV N
Sbjct: 724 AEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDN 783
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
++H+F VGDT HPE IYA L++L +LK +G+V T+LVL + +E KE L HSEK
Sbjct: 784 QIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEK 843
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+ YG++ P PIRV KNLRVC DCH A K ISK+ GR I+ RD RFHHF G CS
Sbjct: 844 LAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCS 903
Query: 774 CGDYW 778
CGDYW
Sbjct: 904 CGDYW 908
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 254/559 (45%), Gaps = 91/559 (16%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
Q D+ +++ YV+ S+ A+ +F+ M +R+V+SW M+ G A G A F +
Sbjct: 62 QSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQ 121
Query: 180 MLEK----NEISWNGLLAAYVQNGRIEEACMLFESKAN----WEVVSWNSLMGGFVKQKR 231
M + N ++ +L A G +E + N ++ N+L+ + K
Sbjct: 122 MQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGS 181
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----------------- 274
+ DA+ +FD M RD SW MI G AQ+ EA LF +
Sbjct: 182 IDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNA 241
Query: 275 ------------------------VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+ D+ A++ Y + G +D+AR++FD M +++ +
Sbjct: 242 SAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVI 301
Query: 311 SWNAMIAGYVQ--------TKRMDMARELFEAMTCKNVASWNTMI-TG------------ 349
SWNAMI G Q T + M +E F + ++ NT + TG
Sbjct: 302 SWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHA 361
Query: 350 ------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
Y + G I A+ +FD++ + +W A+I G AQ ++L
Sbjct: 362 VEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREAL 421
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF++M+R G + + F ++LS +LE K++H + G VGNAL+ MY
Sbjct: 422 SLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMY 480
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG+ A F+++V+++V +W MI+G A+HG G +A LF M GI PD T V
Sbjct: 481 AKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYV 540
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
ILSAC+ TG +E E +S + G++ + + +V + + G +D+A+ + +M
Sbjct: 541 SILSACASTGALEWVKE-VHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-L 598
Query: 572 EPDAATWGALLGACRLYGK 590
E D +W ++G +G+
Sbjct: 599 ERDVYSWTVMIGGLAQHGR 617
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 180/362 (49%), Gaps = 19/362 (5%)
Query: 284 MVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMAREL----FEAM 335
M+ GY + G ++A ++ M + N +++ +++ + +++ ++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
+V ++ Y + G I A+ +FD+M + + ISW +I G A G +++ F+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+M+R G N + S+L+ A+ +LE K++H V G VGNAL+ MY K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL- 514
S+++A F+ +V++D+ SW MI G A+HG G++A LF M+ G P+ T + IL
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 515 -SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
SA + TG +E E + G I + + ++ + + G +D+A+ + M +
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKA-GFISDLRVGNALIHMYAKCGSIDDARLVFDGMC-DR 298
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPE----NAGMYVLLSNLYAASGRWGDVS 629
D +W A++G G +A + +M+ E ++ Y+ L N + ++G W V
Sbjct: 299 DVISWNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVK 355
Query: 630 KV 631
+V
Sbjct: 356 EV 357
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 212/480 (44%), Gaps = 34/480 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQ 113
D D+ WN I +NGC A +F M + S +Y ++++ ++ G + ++
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Query: 114 VFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
V + LVS + + Y+R S+ A+ +F+ + R+V +WN M+ G AQ
Sbjct: 357 VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKC 416
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW---NSL 222
A +F +M + + ++ +L+A V +E + + +V N+L
Sbjct: 417 GREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNAL 476
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDV 278
+ + K AK +FD M R+ +W MI+G AQ+ EA LF E V D
Sbjct: 477 VHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDA 536
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGYVQTKRMDMARELFEA 334
T+ +++S G ++ + + VS NA++ Y + +D AR +F+
Sbjct: 537 TTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDD 596
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDS 390
M ++V SW MI G AQ G A +LF +M + + S+ A+++ + +G ++
Sbjct: 597 MLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEG 656
Query: 391 LRLFIEMKR-YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
R F+ + + YG +T ++ LE K ++ + E G ALL
Sbjct: 657 RRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHF---ILNMPIEPGDAPWGALLG 713
Query: 450 MYCKCGSVEEAYHAFEE---IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
G++E A A +E + K ++ + YA G + L++ M+ GI+ +
Sbjct: 714 ACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKE 773
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 31/282 (10%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
AG D+R N + + + G A VF+ M R+ ++ MISG +G A +F
Sbjct: 465 AGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLF 524
Query: 116 DQMPQRDLV----SWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQN 167
QM + +V ++ ++S +L + + +VS N ++ YA+
Sbjct: 525 LQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKC 584
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV 227
G D ARR+FD MLE++ SW ++ Q+GR +A L FV
Sbjct: 585 GSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDL------------------FV 626
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
K K G + + V S ++ + +L+ Q E ++ +T MV
Sbjct: 627 KMKLEGFKPNGYSFVAVLSACSHAGLVD-EGRRQFLSLTQDYGIEPTMEH---YTCMVDL 682
Query: 288 YVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMA 328
+ G+++EA+ MP E W A++ V ++MA
Sbjct: 683 LGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMA 724
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/613 (42%), Positives = 388/613 (63%), Gaps = 3/613 (0%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP---RRSSVSYNAMISGYLLNGQLDPARQVFD 116
D+ W + IT + RNG + A +F+S+P R+ +NAMISGY+ G+++ A+++FD
Sbjct: 67 DLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFD 126
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+MP ++L+SWN M++GY +N+ + F M +RDVVSWN M+ G+ Q G D+A +
Sbjct: 127 EMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKF 186
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
F + N +SW +L+ + +NG I E+ LF+ + +VSWN+++ +V++ + +A
Sbjct: 187 FQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEAS 246
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+F+ MP RD VSW TMI GY + L EA+ L E P +++ TAM+SGY+Q KVDE
Sbjct: 247 RLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDE 306
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
AR FD + + V WNAMIAGY R++ A L + M K++ +WNTMI+ YAQ G++
Sbjct: 307 ARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQM 366
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A +F+ M + D +SW ++IAG+ +G + D+L+ F M G++ ++ F LS+C
Sbjct: 367 DRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSC 426
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A +A+L++G QLH +VK G+ V NAL+ MY KCG + EA F I DVISWN
Sbjct: 427 ATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWN 486
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
++I GYA +G+GK+AL LFE M + G+ PD++T +GILSAC+H G+V+ G + F M++
Sbjct: 487 SLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKV 546
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
Y + P ++HY CMVDLLGR GRLDEA +++ M + A WGALLGACR +G EL
Sbjct: 547 YAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRL 606
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
AA + E EP YVLLSN++A + RW +V +VR+ M K G SW+EV+N+VH
Sbjct: 607 AAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVH 666
Query: 657 TFSVGDTLHPEKD 669
F D+ D
Sbjct: 667 GFLSDDSTRSRPD 679
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 141/324 (43%), Gaps = 53/324 (16%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G WD+ WN I + +G + AL + M + V++N MIS Y GQ+D A ++F+
Sbjct: 315 GTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFE 374
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADA 172
+M +RDLVSWN +I+G++ N A F +M K D +S+ LS A
Sbjct: 375 EMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQV 434
Query: 173 ARRIFDRMLEKNEISW----NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
++ +++ +++ N L+ Y + GRI EA ++F + +V+SWNSL+G
Sbjct: 435 GNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIG---- 490
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFTWT 282
GYA N Y EA +LFEE AP D T+
Sbjct: 491 ---------------------------GYAINGYGKEALKLFEEMASEGMAP--DEVTFI 521
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTC 337
++S G VD +F M + + + M+ + R+D A E+ M
Sbjct: 522 GILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKV 581
Query: 338 KNVAS-WNTMITGYAQSGEITHAR 360
K A W ++ G + R
Sbjct: 582 KATAGVWGALLGACRAHGNLELGR 605
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 283/741 (38%), Positives = 429/741 (57%), Gaps = 84/741 (11%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+ ++ Y++ +S+ +F+ M ++VVSW ++L+GY QNG + A ++F +M
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEEAC----MLFESKANWEVVSWNSLMGGFVKQKRLG 233
++ N ++ +L +G +E+ M+ +S + + NS++ + K +
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA---------------QRLFEE-----A 273
DAK +FD M R+ VSWN+MI G+ N EA Q +F A
Sbjct: 246 DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305
Query: 274 PVK-------------------DVFTWTAMVSGYVQNGKVDEARMIFDAM-PEKNTVSWN 313
+K D+ TA++ Y + ++D+A +F M +N VSW
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWT 365
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMITG-------------------- 349
A+I+GYVQ R D A LF M + V +++T++T
Sbjct: 366 AIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYEN 425
Query: 350 -----------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
Y++ G+ A +F+ + + D ++W+A+++GYAQ G E ++++F+++
Sbjct: 426 SPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLA 485
Query: 399 RYGERLNRSPFTSVLSTCAN-LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+ G N F+SVL+ CA AS+E GKQ H +K GF V +AL+ MY K G++
Sbjct: 486 KEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNI 545
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E A F+ VD+D++SWN+MI+GYA+HG GK +L +FE M++ ++ D IT +G++SAC
Sbjct: 546 ESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISAC 605
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+H GLV +G YF M +DY ++P +HY+CMVDL RAG L++A +L+ MPF A
Sbjct: 606 THAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATI 665
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
W LL ACR++ +L E AAE + ++P+++ YVLLSN+YA +G W + +KVR M
Sbjct: 666 WRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDM 725
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD 697
+ VKK GYSW+EV+NK +F GD HP+ DRIY LEEL +LK G+ TK VLHD
Sbjct: 726 KKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHD 785
Query: 698 VGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
V EE KE +L HSE+LA+A+G+++ P G PI+++KNLRVC DCH IK ISKI GR I+
Sbjct: 786 VEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIV 845
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
+RD+NRFHHF GGSCSCGDYW
Sbjct: 846 VRDSNRFHHFKGGSCSCGDYW 866
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 229/506 (45%), Gaps = 72/506 (14%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
++Q+FD+ PQ+ L N ++ + RN A NLF + + + + LS +
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLK---- 100
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
+FDR++ K V + GFV+
Sbjct: 101 -VCGCLFDRIVGKQ--------------------------------VHCQCIKCGFVEDV 127
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
+G +++ Y + + + +R+F+E VK+V +WT++++GY Q
Sbjct: 128 SVG-----------------TSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQ 170
Query: 291 NGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW--- 343
NG ++A +F M + N ++ A++ G ++ ++ + + S
Sbjct: 171 NGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFV 230
Query: 344 -NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N+M+ Y++S ++ A+ +FD M + +SW ++IAG+ +G ++ LF M+ G
Sbjct: 231 GNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+L ++ F +V+ CAN+ + KQLH Q++K G + + AL+V Y KC +++A+
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350
Query: 463 AFEEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F + ++V+SW +I+GY ++G A+ LF M+ G++P+ T IL+A
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA---NA 407
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
V + + +Y P+ T + D + G +EA + + + E D W A+
Sbjct: 408 AVSPSQIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELID-EKDIVAWSAM 464
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPE 607
L Y + E A ++ ++ E
Sbjct: 465 LSG---YAQMGDIEGAVKIFLQLAKE 487
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 187/408 (45%), Gaps = 45/408 (11%)
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
+Q+LF+E P + + ++ + +N + EA +F + + + + ++ ++
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 326 DMARELFEAMTCK--------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
R + + + C+ +V+ +++ Y ++ + +FD M + +SW ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+AGY Q+G +E +L+LF +M+ G + N F +VL A ++E G Q+H ++K G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
++ FVGN+++ MY K V +A F+ + +++ +SWN+MIAG+ +G +A LF
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 498 MKTVGIKPDDITMVGILSACS-----------HTGLVEKGTEYFYSMNRDYGV------- 539
M+ G+K ++ C+ H +++ G+++ ++ V
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 540 -------------IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE---PDAATWGALLG 583
+ N +T ++ + GR D A NL M E P+ T+ +L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
A +++ + +E P + LS+ Y+ G + +K+
Sbjct: 405 ANAAVSPSQIHALVVKTNYENSPS---VGTALSDSYSKIGDANEAAKI 449
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 132/254 (51%), Gaps = 5/254 (1%)
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
H++ LFD PQ ++ ++++ ++++L LF+ ++R G + S + VL C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L +GKQ+H Q +K GF VG +L+ MY K SVE+ F+E+ K+V+SW +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
++AGY ++G + AL LF M+ GIKP+ T +L + G VEKG + ++M
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKS 222
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ MV++ ++ + +A+ + +M +A +W +++ G L +A
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNG---LDLEA 278
Query: 598 AEVIFEMEPENAGM 611
E+ + M E +
Sbjct: 279 FELFYRMRLEGVKL 292
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 179/375 (47%), Gaps = 36/375 (9%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL--NGQLDPAR-- 112
G ++ W I+ +++NG D A+++F M RR V N +L N + P++
Sbjct: 357 GVQNVVSWTAIISGYVQNGRTDRAMNLFCQM-RREGVRPNHFTYSTILTANAAVSPSQIH 415
Query: 113 -QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
V + + Y + + A +FE++ ++D+V+W+ MLSGYAQ G +
Sbjct: 416 ALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIE 475
Query: 172 AARRIFDRM----LEKNEISWNGLL------AAYVQNGRIEEACMLFESKANWEVVSWNS 221
A +IF ++ +E NE +++ +L A V+ G+ +C + +N VS ++
Sbjct: 476 GAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVS-SA 534
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----D 277
L+ + K+ + A +F R RD VSWN+MI+GYAQ+ ++ ++FEE K D
Sbjct: 535 LVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELD 594
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELF 332
T+ ++S G V+E + FD M + + ++ M+ Y + ++ A +L
Sbjct: 595 GITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLI 654
Query: 333 EAMTCKNVAS-WNTMITGY-----AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
M A+ W T++ Q GE+ A L PQ D ++ + YA +G
Sbjct: 655 NKMPFPAGATIWRTLLAACRVHLNVQLGELA-AEKLISLQPQ-DSAAYVLLSNIYATAGN 712
Query: 387 SED--SLRLFIEMKR 399
++ +R ++MK+
Sbjct: 713 WQERAKVRKLMDMKK 727
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/738 (37%), Positives = 431/738 (58%), Gaps = 55/738 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--KRD 153
N +I Y + +LD ARQ+FD++ + D ++ M+SGY + ++ AR++FE P RD
Sbjct: 53 NRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRD 112
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLF- 208
V +N M++G++ N +A +F +M + ++ ++ +LA E+ C+ F
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFH 172
Query: 209 ----ESKANWEVVSWNSLMGGFVK----QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+S A + N+L+ + + L A+ +FD +P +DE SW TM+TGY +N
Sbjct: 173 AAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKN 232
Query: 261 NYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSW--- 312
+ L + + + AM+SGYV G EA R + + E + ++
Sbjct: 233 GCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 313 -------------------------------NAMIAGYVQTKRMDMARELFEAMTCKNVA 341
N+++ Y + + + AR +FE M K++
Sbjct: 293 IRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLV 352
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
SWN +++GY SG I A+ +F M + + +SW +I+G A++G+ E+ L+LF MKR G
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
F+ + +CA L + G+Q H QLVK+GF++ GNAL+ MY KCG VEEA
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQ 472
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F + D +SWN +IA +HG G +A+ ++E M GI+PD IT + +L+ACSH G
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAG 532
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV++G +YF SM Y + P + HY ++DLL R+G+ EA+++++++PF+P A W AL
Sbjct: 533 LVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEAL 592
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
L CR++G EL AA+ +F + PE+ G Y+LLSN+YAA+G+W +V++VR MRDRGVK
Sbjct: 593 LSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVK 652
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K SW+E++ +VHTF V DT HPE + +Y YL++L ++++ G+V T VLHDV +
Sbjct: 653 KEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESD 712
Query: 702 -EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
KE ML HSEK+AVA+G++ +P G IR+ KNLR C DCHN + +SK+V R IILRD
Sbjct: 713 GHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRD 772
Query: 761 NNRFHHFSGGSCSCGDYW 778
RFHHF G CSCG++W
Sbjct: 773 RKRFHHFRNGECSCGNFW 790
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 181/434 (41%), Gaps = 93/434 (21%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS-VSYNAMISGYLLNG------------ 106
D R W +T +++NGC D + M V+YNAMISGY+ G
Sbjct: 218 DERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRM 277
Query: 107 -----QLDP------------------ARQVFDQMPQRDLVSW---NVMISGYVRNKSLS 140
+LD +QV + +R+ S+ N +++ Y + +
Sbjct: 278 VSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFN 337
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
AR +FE MP +D+VSWN +LSGY +G+ A+ IF M EKN +SW +++ +NG
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 201 IEEACMLFE--SKANWEVVSW-------------------------------------NS 221
EE LF + +E + N+
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNA 457
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----D 277
L+ + K + +A+ +F MP D VSWN +I Q+ + EA ++EE K D
Sbjct: 458 LITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPD 517
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA-----MIAGYVQTKRMDMARELF 332
T+ +++ G VD+ R F++M + A +I ++ + A +
Sbjct: 518 RITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESII 577
Query: 333 EAMTCKNVAS-WNTMITGYAQSGE----ITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
E++ K A W +++G G I A LF +P+HD ++ + YA +G
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG-TYMLLSNMYAATGQW 636
Query: 388 EDSLRLFIEMKRYG 401
E+ R+ M+ G
Sbjct: 637 EEVARVRKLMRDRG 650
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 40/213 (18%)
Query: 409 FTSVLSTCANL--ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+ + L C L SL+L + +HG ++ GF+ + N L+ +YCK ++ A F+E
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74
Query: 467 IVDKDVISWNTMIAGY--------ARHGF-------------------------GKDALM 493
I + D I+ TM++GY AR F G A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LF MK G KPDD T +L+ + EK F++ G + +V +
Sbjct: 135 LFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVY 194
Query: 554 GRAGR----LDEAQNLMKNMPFEPDAATWGALL 582
R L A+ + ++P E D +W ++
Sbjct: 195 SRCASSPSLLHSARKVFDDIP-EKDERSWTTMM 226
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D + N IT + + G + A VF +MP SVS+NA+I+ +G A V+++
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEE 508
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M ++ + + D +++ T+L+ + G D R+ F
Sbjct: 509 MLKKGI---------------------------RPDRITFLTVLTACSHAGLVDQGRKYF 541
Query: 178 DRMLEKNEIS-----WNGLLAAYVQNGRIEEACMLFES---KANWEVVSWNSLMGG 225
+ M I + L+ ++G+ EA + ES K E+ W +L+ G
Sbjct: 542 NSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEI--WEALLSG 595
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 281/720 (39%), Positives = 418/720 (58%), Gaps = 21/720 (2%)
Query: 80 ALH--VFNSMPRRSSVSY-NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN 136
ALH + ++P N +++ Y G+ AR+VFD P +L ++N ++S
Sbjct: 26 ALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHA 85
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE------KNEISWNG 190
+ L +LF M +RD VS+N +++G++ G A R++ +L + I+ +
Sbjct: 86 RLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSA 145
Query: 191 L-LAAYVQNGRI---EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+ +AA R + C + + L+G + K +GDAK +FD M ++
Sbjct: 146 MVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKN 205
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
V +NTMITG + + EA+RLFE +D TWT MV+G+ QNG +A F M
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRF 265
Query: 307 K----NTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITH 358
+ + ++ +++ ++ +++ + NV + ++ Y++ I
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKP 325
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A F RM + ISW A+I GY Q+G SE+++R+F EM+R G + SV+S+CAN
Sbjct: 326 AETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCAN 385
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
LASLE G Q H + G V NAL+ +Y KCGS+E+A+ F+E++ D +SW +
Sbjct: 386 LASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTAL 445
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ GYA+ G K+ + LFE M +KPD +T +G+LSACS G VEKG YF+SM +D+G
Sbjct: 446 VTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHG 505
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
++P HYTCM+DL R+GRL EA+ +K MP PDA WG LL ACRL G E+ + AA
Sbjct: 506 IVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAA 565
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
E + E++P+N YVLL +++A G W V+++R MRDR VKK G SW++ +NKVH F
Sbjct: 566 ENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIF 625
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
S D HP IY LE L K+ ++G+ VLHDV + +K HM+ +HSEKLA+A+
Sbjct: 626 SADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAF 685
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G++ +P PIR++KNLRVC DCHNA K ISKI GR I++RD RFH FS G CSCGD+W
Sbjct: 686 GLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/547 (23%), Positives = 226/547 (41%), Gaps = 118/547 (21%)
Query: 45 LNSKSRNKPKPAGDWD---IRQWNVAITTHMRN---------GCCDSALHVFNSMPRRSS 92
L++ +R +P AG +R TH+ N G A VF++ P +
Sbjct: 13 LSAAARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPHPNL 72
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM--- 149
+YNA++S LD +F M QRD VS+N +I+G+ + + A L+ +
Sbjct: 73 FTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRA 132
Query: 150 -----PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGR 200
P R ++ + M+ + G R+ ++L N + L+ Y + G
Sbjct: 133 GSSVRPSR--ITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
I +A +F+ VV +N+++ G ++ K + +A+ +F+ M RD ++W TM+TG+ QN
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250
Query: 261 NYLAEAQRLFEEAPVK---------------------------------------DVFTW 281
++A F + +VF
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------ 335
+A+V Y + + A F M KN +SW A+I GY Q + A +F M
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370
Query: 336 -----------TCKNVASW----------------------NTMITGYAQSGEITHARNL 362
+C N+AS N ++T Y + G I A L
Sbjct: 371 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD M HD +SW A++ GYAQ G +++++ LF +M + + F VLS C+ +
Sbjct: 431 FDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFV 490
Query: 423 ELG-------KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVIS 474
E G ++ HG +V + C + +Y + G ++EA +++ + D I
Sbjct: 491 EKGCSYFHSMQKDHG-IVPIDDHYTCMID-----LYSRSGRLKEAEEFIKQMPMHPDAIG 544
Query: 475 WNTMIAG 481
W T+++
Sbjct: 545 WGTLLSA 551
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 307/854 (35%), Positives = 441/854 (51%), Gaps = 157/854 (18%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ S + A+++ Y+ G ++ A+ +FD+M +R+++SW VMI G
Sbjct: 244 HIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQE 303
Query: 142 ARNLFEMMPKR---------------------------------------DVVSWNTMLS 162
A +LF M + D+ N ++
Sbjct: 304 AFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVH 363
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-------------- 208
YA++G D AR +FD M E++ SW ++ Q+GR +EA LF
Sbjct: 364 MYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTT 423
Query: 209 ------------ESKANW-EVVSWNSLMGGFVKQKRLG--------------DAKWIFDR 241
S W +VV ++ GF+ R+G DA+ +FD
Sbjct: 424 YLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDG 483
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTW---------------- 281
M RD +SWN M+ G AQN EA +F +E V D T+
Sbjct: 484 MCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWV 543
Query: 282 -------------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
+A + Y++ G +D+AR++FD + ++ +WNAMI G Q
Sbjct: 544 NEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQ 603
Query: 323 K--------RMDMARELF--EAMTCKNVAS---------W-------------------N 344
+ + M RE F +A T N+ S W N
Sbjct: 604 RCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGN 663
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++ Y++ G + +A+ +FD M + + +W +I G AQ G D+ F++M R G
Sbjct: 664 ALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVP 723
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ + + S+LS CA+ +LE K++H V G + VGNAL+ MY KCGS+++A F
Sbjct: 724 DATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVF 783
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+++V++DV SW MI G A+HG G +AL F MK+ G KP+ + V +L+ACSH GLV+
Sbjct: 784 DDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVD 843
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G F SM +DYG+ P +HYTCMVDLLGRAG L+EA+ + NMP EPD A WGALLGA
Sbjct: 844 EGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGA 903
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C YG E+AE AA+ +++P++A YVLLSN+YAA+G+W VR M+ +G++K
Sbjct: 904 CVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEP 963
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW+EV N++H+F VGDT HPE IYA L +L +LK G+V T+LVL + +E KE
Sbjct: 964 GRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKE 1023
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L HSEKLA+ YG++ + PIRV KNLRVC DCH A K ISKI GR I+ RD RF
Sbjct: 1024 QALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRF 1083
Query: 765 HHFSGGSCSCGDYW 778
HHF G CSCGDYW
Sbjct: 1084 HHFKDGVCSCGDYW 1097
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 167/653 (25%), Positives = 279/653 (42%), Gaps = 130/653 (19%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR--- 121
N + ++R G A VF+ + +++ + MI GY G + A +V+D+M Q
Sbjct: 157 NKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQ 216
Query: 122 ------------------------------------DLVSWNVMISGYVRNKSLSAARNL 145
D+ +++ YV+ S+ A+ +
Sbjct: 217 PNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLI 276
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRI 201
F+ M +R+V+SW M+ G A G A +F +M + N ++ +L A G +
Sbjct: 277 FDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL 336
Query: 202 EEACMLFESKAN----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
E + N ++ N+L+ + K + DA+ +FD M RD SW MI G
Sbjct: 337 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGL 396
Query: 258 AQNNYLAEAQRLF----------------------------------------EEAP-VK 276
AQ+ EA LF EEA +
Sbjct: 397 AQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFIS 456
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ--------TKRMDMA 328
D+ A++ Y + G +D+AR++FD M +++ +SWNAM+ G Q T + M
Sbjct: 457 DLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQ 516
Query: 329 RE-----------LFEAMTCKNVASW--------------------NTMITGYAQSGEIT 357
+E L + W + I Y + G I
Sbjct: 517 QEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSID 576
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR LFD++ +W A+I G AQ ++L LF++M+R G + + F ++LS
Sbjct: 577 DARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANV 636
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ +LE K++H G VGNAL+ Y KCG+V+ A F+++V+++V +W
Sbjct: 637 DEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTM 695
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI G A+HG G DA F M GI PD T V ILSAC+ TG +E E ++
Sbjct: 696 MIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKE-VHNHAVSA 754
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
G++ + + +V + + G +D+A+++ +M E D +W ++G +G+
Sbjct: 755 GLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGGLAQHGR 806
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 184/697 (26%), Positives = 307/697 (44%), Gaps = 153/697 (21%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+++L N ++ Y+R L AR +F+ + K+++ W TM+ GYA+ G+A+ A R++D+
Sbjct: 150 EQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDK 209
Query: 180 MLEK----NEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
M ++ NEI++ +L A ++ G+ A + +S +V +L+ +VK
Sbjct: 210 MRQECGQPNEITYLSILKACCCPVNLKWGKKIHA-HIIQSGFQSDVRVETALVNMYVKCG 268
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWT---- 282
+ DA+ IFD+M R+ +SW MI G A EA LF E + + +T+
Sbjct: 269 SIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILN 328
Query: 283 -------------------------------AMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
A+V Y ++G +D+AR++FD M E++ S
Sbjct: 329 ANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFS 388
Query: 312 WNAMIAGYVQTKRMDMARELF---------------------EAMTCKNVASW------- 343
W MI G Q R A LF A+ + W
Sbjct: 389 WTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKH 448
Query: 344 -------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
N +I YA+ G I AR +FD M D ISW A++ G AQ+G ++
Sbjct: 449 AEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEA 508
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
+F++M++ G + + + S+L+T + +LE ++H V+ G + VG+A + M
Sbjct: 509 FTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHM 568
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y +CGS+++A F+++ + V +WN MI G A+ G++AL LF M+ G PD T
Sbjct: 569 YIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTF 628
Query: 511 VGILSA----------------CSHTGLVE--KGTEYFYSMNR-----------DYGVIP 541
+ ILSA + GLV+ G ++ ++ D V
Sbjct: 629 INILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVER 688
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE---PDAATWGALLGACRLYGKTELAEK-- 596
N +T M+ L + G +A + M E PDA T+ ++L AC G E ++
Sbjct: 689 NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVH 748
Query: 597 ----AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
+A ++ ++ NA L ++YA G D V M +R V +SW
Sbjct: 749 NHAVSAGLVSDLRVGNA-----LVHMYAKCGSIDDARSVFDDMVERDV-----FSW---- 794
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEF--KLKQDGF 687
T +G + LE L+F K+K +GF
Sbjct: 795 ----TVMIGGLAQHGRG-----LEALDFFVKMKSEGF 822
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 229/481 (47%), Gaps = 54/481 (11%)
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
I +E+N N LL Y++ GR++ A +F+ + W +++GG+ + DA
Sbjct: 144 IIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDA 203
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSG 287
++D+M +E+++ +++ L ++ + + DV TA+V+
Sbjct: 204 MRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNM 263
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--------MDMARELF------- 332
YV+ G +++A++IFD M E+N +SW MI G R + M RE F
Sbjct: 264 YVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTY 323
Query: 333 ----EAMTCKNVASW--------------------NTMITGYAQSGEITHARNLFDRMPQ 368
A W N ++ YA+SG I AR +FD M +
Sbjct: 324 VSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTE 383
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL--STCANLASLELGK 426
D SW +I G AQ G +++ LF++M+R G N + + S+L S A+ ++LE K
Sbjct: 384 RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVK 443
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+H + GF + +GNAL+ MY KCGS+++A F+ + D+DVISWN M+ G A++G
Sbjct: 444 VVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNG 503
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
G +A +F M+ G+ PD T + +L+ T +E E + + G+I + +
Sbjct: 504 CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNE-VHKHAVETGLISDFRVG 562
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
+ + + R G +D+A+ L + TW A++G + +A + +M+
Sbjct: 563 SAFIHMYIRCGSIDDARLLFDKLSVR-HVTTWNAMIGGA---AQQRCGREALSLFLQMQR 618
Query: 607 E 607
E
Sbjct: 619 E 619
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 172/394 (43%), Gaps = 28/394 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQ 113
D D+ WN + +NGC A VF M + S +Y ++++ + L+ +
Sbjct: 486 DRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNE 545
Query: 114 VFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
V + L+S + I Y+R S+ AR LF+ + R V +WN M+ G AQ
Sbjct: 546 VHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRC 605
Query: 170 ADAARRIFDRMLEKNEI----SWNGLLAAYVQNGRIEEACMLFESKANWEVVSW---NSL 222
A +F +M + I ++ +L+A V +E + + +V N+L
Sbjct: 606 GREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNAL 665
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ----NNYLAEAQRLFEEAPVKDV 278
+ + K + AK +FD M R+ +W MI G AQ ++ + ++ E V D
Sbjct: 666 VHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDA 725
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGYVQTKRMDMARELFEA 334
T+ +++S G ++ + + + VS NA++ Y + +D AR +F+
Sbjct: 726 TTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDD 785
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDS 390
M ++V SW MI G AQ G A + F +M + S+ A++ + +G ++
Sbjct: 786 MVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEG 845
Query: 391 LRLFIEMKR-YGERLNRSPFTSVLSTCANLASLE 423
R F+ M + YG +T ++ LE
Sbjct: 846 RRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLE 879
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 127/241 (52%), Gaps = 9/241 (3%)
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
++D++ + + G ++ + ++L C + L KQ+H ++K G E +V N
Sbjct: 99 AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANK 158
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
LL +Y +CG ++ A F++++ K++ W TMI GYA +G +DA+ +++ M+ +P+
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+IT + IL AC ++ G + + + G + + T +V++ + G +++AQ +
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQS-GFQSDVRVETALVNMYVKCGSIEDAQLIF 277
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE----NAGMYVLLSNLYAAS 622
M E + +W ++G YG+ ++A + +M+ E N+ YV + N A++
Sbjct: 278 DKM-VERNVISWTVMIGGLAHYGR---GQEAFHLFLQMQREGFIPNSYTYVSILNANASA 333
Query: 623 G 623
G
Sbjct: 334 G 334
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 31/282 (10%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
AG D+R N + T+ + G A VF+ M R+ ++ MI G +G A F
Sbjct: 654 AGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHF 713
Query: 116 DQMPQRDLV----SWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQN 167
QM + +V ++ ++S +L + + +VS N ++ YA+
Sbjct: 714 LQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKC 773
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV 227
G D AR +FD M+E++ SW ++ Q+GR EA + FV
Sbjct: 774 GSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEA------------------LDFFV 815
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
K K G + + V S ++ + +L+ Q E ++ +T MV
Sbjct: 816 KMKSEGFKPNGYSYVAVLTACSHAGLVD-EGRRQFLSMTQDYGIEPTMEH---YTCMVDL 871
Query: 288 YVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMA 328
+ G ++EA + MP E + W A++ V ++MA
Sbjct: 872 LGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMA 913
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 284/740 (38%), Positives = 433/740 (58%), Gaps = 60/740 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
A+I+ ++ G +D A +VF+ +P+RDL++W MI+G R++ A NLF++M +
Sbjct: 244 TALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ 303
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRMLE---KNEI-SWNGLLAAYVQNGRIEEACML 207
D V++ ++L + +R+ RM E EI LL+ Y + G +E+A +
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEV 363
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNN 261
F VVSW +++ GF + R+ +A F++M P R V++ +++ ++ +
Sbjct: 364 FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNR--VTFMSILGACSRPS 421
Query: 262 YLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
L + + R+ + + D TA++S Y + G + +AR +F+ + ++N V+WNAMI
Sbjct: 422 ALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMIT 481
Query: 318 GYVQTKRMDMARELFEAM-----------------TCKN-----VASW------------ 343
YVQ ++ D A F+A+ CK+ + W
Sbjct: 482 AYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFES 541
Query: 344 -----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
N +++ + G++ A NLF+ MP+ D +SW IIAG+ Q G ++ + F M+
Sbjct: 542 DLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQ 601
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G + ++ FT +L+ CA+ +L G++LH + + + VG L+ MY KCGS++
Sbjct: 602 ESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSID 661
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
+A+ F + K+V SW +MI GYA+HG GK+AL LF M+ G+KPD IT VG LSAC+
Sbjct: 662 DAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACA 721
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H GL+++G +F SM +D+ + P +HY CMVDL GRAG L EA + M +PD+ W
Sbjct: 722 HAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLW 780
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
GALLGAC+++ ELAEK A+ E++P + G+YV+LSN+YAA+G W +V+K+R M DR
Sbjct: 781 GALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDR 840
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
GV K G SW+EV +VH F D HP+ + I+A L L ++K+ G+V T+ VLHDV
Sbjct: 841 GVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDV 900
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+ EKEH L +HSE+LA+AYG+L P PI + KNLRVC DCH A K ISKI R II
Sbjct: 901 EDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIA 960
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD+NRFHHF G CSCGD+W
Sbjct: 961 RDSNRFHHFKDGVCSCGDFW 980
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 287/568 (50%), Gaps = 60/568 (10%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----P 150
+N +IS Y G + A+Q+FD+MP +D+ SWN+++ GYV+++ A L E M
Sbjct: 142 WNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGV 201
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACM 206
K D ++ ML+ A D +F +L + + L+ +++ G +++A
Sbjct: 202 KPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALK 261
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNY 262
+F + ++++W S++ G + ++ A +F M D+V++ +++
Sbjct: 262 VFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEA 321
Query: 263 LAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
L + +R+ E +++ TA++S Y + G +++A +F+ + +N VSW AMIAG
Sbjct: 322 LEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381
Query: 319 YVQTKRMDMARELFEAM-----------------TCKNVASW------------------ 343
+ Q RM+ A F M C ++
Sbjct: 382 FAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD 441
Query: 344 ----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+++ YA+ G + ARN+F+R+ + + ++W A+I Y Q ++++ F + +
Sbjct: 442 DRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLK 501
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G + + S FTS+L+ C + +LELGK + +++ GFE+ + NAL+ M+ CG +
Sbjct: 502 EGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMS 561
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A + F ++ ++D++SWNT+IAG+ +HG + A F+ M+ G+KPD IT G+L+AC+
Sbjct: 562 AMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACAS 621
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+ +G +++ + + + T ++ + + G +D+A + N+P + + +W
Sbjct: 622 PEALTEGRR-LHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWT 679
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPE 607
+++ +G+ ++A E+ +M+ E
Sbjct: 680 SMITGYAQHGR---GKEALELFCQMQQE 704
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 208/463 (44%), Gaps = 80/463 (17%)
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
SK ++ WN L+ + K AK IFD MP +D SWN ++ GY Q+ EA RL
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 270 FEE------APVK---------------------------------DVFTWTAMVSGYVQ 290
E+ P K D+F TA+++ +++
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-------- 342
G VD+A +F+ +P ++ ++W +MI G + ++ A LF+ M + V
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312
Query: 343 -------------------------------WNTMITGYAQSGEITHARNLFDRMPQHDC 371
+++ Y + G + A +F+ + +
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+SW A+IAG+AQ G E++ F +M G NR F S+L C+ ++L+ G+Q+H +
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDR 432
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
++K G+ V ALL MY KCGS+ +A + FE I ++V++WN MI Y +H +A
Sbjct: 433 IIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNA 492
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
+ F+++ GIKPD T IL+ C +E G ++ S+ G + +V
Sbjct: 493 VATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVS 551
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ G L A NL +MP E D +W ++ +G+ + A
Sbjct: 552 MFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 125/242 (51%), Gaps = 4/242 (1%)
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A + +++G +++ + + + +++R ++S+L C +L G+++H +
Sbjct: 74 AFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFS 133
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
+ F+ N L+ MY KCG+ A F+E+ DKDV SWN ++ GY +H ++A L
Sbjct: 134 KIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLH 193
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
E M G+KPD T V +L+AC+ V+KG E F S+ + G + T ++++ +
Sbjct: 194 EQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF-SLILNAGWDTDLFVGTALINMHIK 252
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE--MEPENAGMYV 613
G +D+A + N+P D TW +++ + + + A +V+ E ++P+
Sbjct: 253 CGGVDDALKVFNNLP-RRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVS 311
Query: 614 LL 615
LL
Sbjct: 312 LL 313
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 126/311 (40%), Gaps = 82/311 (26%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSY------- 95
+RN + ++ WN IT ++++ D+A+ F ++ P S+ +
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520
Query: 96 --------------------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVM 129
NA++S ++ G L A +F+ MP+RDLVSWN +
Sbjct: 521 PDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTI 580
Query: 130 ISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARR----IFDRML 181
I+G+V++ A + F+MM K D +++ +L+ A RR I + L
Sbjct: 581 IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAAL 640
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ + + GL++ Y + G I++A ++F + V SW S
Sbjct: 641 DCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTS-------------------- 680
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEA 297
MITGYAQ+ EA LF +E D T+ +S G + E
Sbjct: 681 -----------MITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG 729
Query: 298 RMIFDAMPEKN 308
F++M + N
Sbjct: 730 LHHFESMKDFN 740
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 283/721 (39%), Positives = 427/721 (59%), Gaps = 21/721 (2%)
Query: 79 SALH--VFNSMPRRS-SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR 135
+A+H + ++P S + N +++ Y +G L AR+VFD MP R+LV+ N ++S R
Sbjct: 30 AAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALAR 89
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE------KNEISWN 189
+ LF +P+RD VS+N +L+G+++ G A + +L + I+ +
Sbjct: 90 AGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMS 149
Query: 190 GL-LAAYVQNGRI---EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
G+ + A R + C + + + L+ + K +GDA+ +FD M +
Sbjct: 150 GVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGK 209
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ V NTMITG + +AEA+ LFE +D TWT MV+G QNG EA +F M
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269
Query: 306 EK----NTVSWNAMIAGYVQTKRMDMAREL--FEAMTC--KNVASWNTMITGYAQSGEIT 357
+ + ++ +++ ++ +++ + TC NV + ++ Y++ +
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVR 329
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F RM + ISW A+I GY Q+G E+++R+F EM+R G + + SV+S+CA
Sbjct: 330 LAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCA 389
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
NLASLE G Q H + G V NAL+ +Y KCGS+E+A+ F+E+ D +SW
Sbjct: 390 NLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 449
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
++ GYA+ G K+ + LFE M + G+KPD +T +G+LSACS +GLV+KG YF+SM +D+
Sbjct: 450 LVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDH 509
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
++P HYTCM+DL R+G L +A+ +K MP PDA W LL ACRL G E+ + A
Sbjct: 510 DIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWA 569
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE + +++P+N YVLL +++A+ G W DV+K+R MRDR VKK G SW++ +NKVH
Sbjct: 570 AENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHI 629
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
FS D HP IY L+ L K+ ++G+ VLHDV + EK HML +HSEKLA+A
Sbjct: 630 FSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIA 689
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G++ +P PIR++KNLRVC DCHNA K ISKI GR I++RD RFH FS G CSCGD+
Sbjct: 690 FGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDF 749
Query: 778 W 778
W
Sbjct: 750 W 750
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 135/571 (23%), Positives = 234/571 (40%), Gaps = 136/571 (23%)
Query: 50 RNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLD 109
R P P+ + + N +T + +G A VF++MP R+ V+ N+++S G +
Sbjct: 38 RTLPHPSPTYLL---NTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVR 94
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKS--------LSAARNLFEMMPKRDVVSWNTML 161
++F +PQRD VS+N +++G+ R + ++ R+ + P R +S M+
Sbjct: 95 DMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMV 154
Query: 162 SGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
+ + G R++ ++L + + L+ Y + G I +A +F+ VV
Sbjct: 155 A--SALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVV 212
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK- 276
N+++ G ++ K + +A+ +F+ + RD ++W TM+TG QN +EA +F +
Sbjct: 213 MCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEG 272
Query: 277 --------------------------------------DVFTWTAMVSGYVQNGKVDEAR 298
+VF +A+V Y + V A
Sbjct: 273 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAE 332
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVA 341
+F M KN +SW AMI GY Q + A +F M +C N+A
Sbjct: 333 AVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLA 392
Query: 342 SW----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
S N ++T Y + G I A LFD M HD +SW A++
Sbjct: 393 SLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVM 452
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
GYAQ G +++++ LF +M G + + F VLS C+ ++ G+
Sbjct: 453 GYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSY----------- 501
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS----WNTMIAGYARHGFGKDALMLF 495
+H+ ++ D D++ + MI Y+R G+ K A
Sbjct: 502 ---------------------FHSMQQ--DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFI 538
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ M PD +LSAC G +E G
Sbjct: 539 KQMPRC---PDAFGWATLLSACRLRGDMEIG 566
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 160/365 (43%), Gaps = 33/365 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-----GQLDPARQV 114
D W +T +NG AL VF M R V + G +L L+ +Q+
Sbjct: 241 DSITWTTMVTGLTQNGLESEALDVFRRM-RAEGVGIDQYTFGSILTACGALAALEEGKQI 299
Query: 115 FDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ + ++ + ++ Y + +S+ A +F M ++++SW M+ GY QNG
Sbjct: 300 HAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCG 359
Query: 171 DAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSL 222
+ A R+F M ++ ++ + ++++ +EE C+ S V N+L
Sbjct: 360 EEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNAL 419
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV---- 278
+ + K + DA +FD M D+VSW ++ GYAQ E LFE+ K V
Sbjct: 420 VTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDG 479
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELFE 333
T+ ++S ++G VD+ R F +M + + + + MI Y ++ + A E +
Sbjct: 480 VTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIK 539
Query: 334 AMT-CKNVASWNTMITGYAQSGEIT----HARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
M C + W T+++ G++ A NL PQ+ S+ + + +A G
Sbjct: 540 QMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPA-SYVLLCSMHASKGEWN 598
Query: 389 DSLRL 393
D +L
Sbjct: 599 DVAKL 603
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 301/844 (35%), Positives = 458/844 (54%), Gaps = 102/844 (12%)
Query: 36 PSKKTLKRHLNSKSRN------KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM-- 87
PS + +L SK RN + + D+ W+ I+ + +NG AL F+ M
Sbjct: 91 PSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL 150
Query: 88 --PRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKSLSA 141
+ + ++++++ + L +QV + + D+ N ++ Y +
Sbjct: 151 LGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLD 210
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV- 196
++ LF+ +P+R+VVSWN + S Y Q + A +F M ++ NE S + ++ A
Sbjct: 211 SKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTG 270
Query: 197 ----QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
G+I L + +W+ S N+L+ + K L DA +F+++ D VSWN
Sbjct: 271 LRDSSRGKIIHG-YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNA 329
Query: 253 MITGYAQNNY----------------------------------LAEAQRLFEEAPVK-- 276
+I G + + L E R + +K
Sbjct: 330 VIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMD 389
Query: 277 ---DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
D+F +V Y + +++ARM F+ +PEK+ ++WNA+I+GY Q A LF
Sbjct: 390 MESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFV 449
Query: 334 AM--------------------------TCKNVASW-------------NTMITGYAQSG 354
M C+ V N++I Y +
Sbjct: 450 EMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCS 509
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ A +F+ D +S+ ++I YAQ G E++L+LF+EM+ + +R +S+L+
Sbjct: 510 HVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLN 569
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CANL++ E GKQLH ++K GF F GN+L+ MY KCGS+++A AF E+ ++ ++S
Sbjct: 570 ACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS 629
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W+ MI G A+HG G+ AL LF M G+ P+ IT+V +L AC+H GLV + YF SM
Sbjct: 630 WSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESME 689
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+G P +HY CM+DLLGRAG+++EA L+ MPFE +A+ WGALLGA R++ EL
Sbjct: 690 ELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELG 749
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
+AAE++F +EPE +G +VLL+N+YA++G+W +V++VR MRD VKK G SW+EV++K
Sbjct: 750 RRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDK 809
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
V+TF VGD H IYA L+EL + + G+V ++ LHDV + EKE +L +HSEKL
Sbjct: 810 VYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKL 869
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
AVA+G+++ P G PIRV KNLRVC DCH A K+I KIV R II+RD NRFHHF GSCSC
Sbjct: 870 AVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSC 929
Query: 775 GDYW 778
GDYW
Sbjct: 930 GDYW 933
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 174/325 (53%), Gaps = 17/325 (5%)
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLF 363
+VS++ +++ TK + ++ +T ++ N +I Y++ +AR L
Sbjct: 55 TSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLV 114
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
D + D +SW+A+I+GYAQ+G +L F EM G + N F+SVL C+ + L
Sbjct: 115 DESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLR 174
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
+GKQ+HG +V GFE FV N L+VMY KC ++ F+EI +++V+SWN + + Y
Sbjct: 175 IGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYGVI 540
+ F +A+ LF M GIKP++ ++ +++AC TGL + + Y + Y
Sbjct: 235 QIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P S + +VD+ + G L +A ++ + + +PD +W A++ C L+ E E+A E+
Sbjct: 293 PFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH---EHHEQALEL 346
Query: 601 IFEMEPEN--AGMYVLLSNLYAASG 623
+ +M+ ++ L S L A +G
Sbjct: 347 LGQMKRSGICPNIFTLSSALKACAG 371
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 294/839 (35%), Positives = 449/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N I + +NG SA VF+++ + SVS+ AMISG+ NG + A +F +M
Sbjct: 151 NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIF 210
Query: 119 PQRDLVS---------------------------------WNVMISGYVRNKSLSAARNL 145
P + S N +++ Y R + +A +
Sbjct: 211 PTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKV 270
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M +D VS+N+++SG AQ G++D A +F +M L+ + ++ LL+A NG +
Sbjct: 271 FSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGAL 330
Query: 202 EEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ L ++ + +++ +L+ +V + A +F + V WN M+ +
Sbjct: 331 CKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAF 390
Query: 258 AQNNYLAEAQRLFEEAPVK---------------------------------------DV 278
+ + L+E+ R+F + +K +V
Sbjct: 391 GKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNV 450
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+ + ++ Y ++GK+D A +I + E + VSW A+I+GY Q A + F+ M +
Sbjct: 451 YVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNR 510
Query: 339 NVAS---------------------------------------WNTMITGYAQSGEITHA 359
+ S N +++ YA+ G I A
Sbjct: 511 GIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA 570
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F+++ D ISW +I+G+AQSGY ED+L++F +M R + F S +S AN+
Sbjct: 571 YLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANI 630
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++ GKQ+H ++K GF++ V NAL+ Y KCGS+E+A F E+ +K+ +SWN MI
Sbjct: 631 ANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMI 690
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
GY++HG+G +A+ LFE MK VG P+ +T VG+LSACSH GLV KG YF SM++++G+
Sbjct: 691 TGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGL 750
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P HY C+VDL+ RAG L A+ ++ MP EPDA W LL AC ++ E+ E AA+
Sbjct: 751 VPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQ 810
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPE++ YVLLSN+YA SG+W + R MR+RGVKK G SW+EV+N VH F
Sbjct: 811 HLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFY 870
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP D+IY +L EL K + G+ +L+DV +E+K+ + HSEKLA+ +G
Sbjct: 871 VGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFG 930
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+ PI VMKNLRVC+DCH+ IK +SKI R II+RD RFHHF GG CSC DYW
Sbjct: 931 LLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 148/630 (23%), Positives = 281/630 (44%), Gaps = 76/630 (12%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
SV N ++ Y G LD +VF+ MP R + SW+ +ISG++ K + +LF M +
Sbjct: 45 SVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIE 104
Query: 152 RDV----------------------------------------VSWNTMLSGYAQNGYAD 171
+V + N ++ YA+NG
Sbjct: 105 ENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLII 164
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS----WNSLMGGFV 227
+AR++FD + K+ +SW +++ + QNG EEA LF + ++S++ G
Sbjct: 165 SARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCT 224
Query: 228 KQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
K K + +F + N ++T Y++ A+++F + KD ++ +
Sbjct: 225 KIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNS 284
Query: 284 MVSGYVQNGKVDEARMIFDAM------PEKNTVS--WNAMIAGYVQTKRMDMARELFEAM 335
++SG Q G D A +F M P+ TV+ +A + K + + +A
Sbjct: 285 LISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAG 344
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++ ++ Y +I A +F + + W ++ + + +S R+F
Sbjct: 345 ISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFR 404
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+M+ G N+ + S+L TC ++ +L+LG+Q+H Q++K GF+ +V + L+ MY K G
Sbjct: 405 QMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHG 464
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
++ A+ + + DV+SW +I+GYA+H +AL F+ M GI+ D+I +S
Sbjct: 465 KLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAIS 524
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE--- 572
AC+ + +G + ++ + G + +V L R GR+ EA + FE
Sbjct: 525 ACAGIQALNQGRQ-IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY-----LEFEKID 578
Query: 573 -PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYAASGRWGDVS 629
D+ +W L+ + ++ E A +V +M A + S + AA+ +++
Sbjct: 579 AKDSISWNGLISG---FAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAA----NIA 631
Query: 630 KVRLKMRDRGVKKVTGY-SWLEVQNKVHTF 658
++ + + G+ S +EV N + TF
Sbjct: 632 NIKQGKQIHAMIIKRGFDSDIEVSNALITF 661
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 137/547 (25%), Positives = 248/547 (45%), Gaps = 57/547 (10%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
S + N +I Y NG + AR+VFD + +D VSW MISG+ +N A +LF M
Sbjct: 146 SPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMH 205
Query: 151 KRDVVS----WNTMLSGYAQNGYADAARR----IFDRMLEKNEISWNGLLAAYVQNGRIE 202
+ ++++LSG + D + +F N L+ Y +
Sbjct: 206 TAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFV 265
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYA 258
A +F + + VS+NSL+ G +Q A +F +M D V+ ++++ A
Sbjct: 266 SAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACA 325
Query: 259 QNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
N L + ++L + D+ A++ YV + A +F +N V WN
Sbjct: 326 SNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNV 385
Query: 315 MIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN------------- 344
M+ + + + + +F M TC +V + +
Sbjct: 386 MLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTG 445
Query: 345 ---------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
+I YA+ G++ A + + + D +SW A+I+GYAQ ++L+ F
Sbjct: 446 FQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFK 505
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM G + + F+S +S CA + +L G+Q+H Q G+ +GNAL+ +Y +CG
Sbjct: 506 EMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCG 565
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
++EAY FE+I KD ISWN +I+G+A+ G+ +DAL +F M ++ T +S
Sbjct: 566 RIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVS 625
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
A ++ +++G + ++M G + + ++ + G +++A+ MP E +
Sbjct: 626 AAANIANIKQGKQ-IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMP-EKND 683
Query: 576 ATWGALL 582
+W A++
Sbjct: 684 VSWNAMI 690
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 208/434 (47%), Gaps = 48/434 (11%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ V N ++ Y L ++FE+ P + V +W ++SG+++ + +F M
Sbjct: 44 ESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMI 103
Query: 306 EKNT----VSWNAMI---AGY---VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE 355
E+N +S+ +++ +G+ ++ AR + + C + S N +I YA++G
Sbjct: 104 EENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIIS-NPLIGLYAKNGL 162
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I AR +FD + D +SW A+I+G++Q+GY E+++ LF EM G F+SVLS
Sbjct: 163 IISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSG 222
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C + ++G+QLH + K G +V NAL+ +Y + + A F ++ KD +S+
Sbjct: 223 CTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSF 282
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N++I+G A+ GF AL LF MK +KPD +T+ +LSAC+ G + KG E +S
Sbjct: 283 NSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKG-EQLHSYVI 341
Query: 536 DYGVIPNSKHYTCMVDL-------------------------------LGRAGRLDEAQN 564
G+ + ++DL G+ L E+
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFR 401
Query: 565 LMKNMPFE---PDAATWGALLGACRLYGKTELAEKA-AEVIFEMEPENAGMYVLLSNLYA 620
+ + M + P+ T+ ++L C G +L E+ +VI N + +L ++YA
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 621 ASGRWGDVSKVRLK 634
G+ D + V L+
Sbjct: 462 KHGKL-DTAHVILR 474
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 197/469 (42%), Gaps = 84/469 (17%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ----NNYLAEAQRLF 270
E V N L+ + L +F+ MP R SW+ +I+G+ + N L +
Sbjct: 44 ESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMI 103
Query: 271 EE--APVKDVFTWT----------------------------------AMVSGYVQNGKV 294
EE +P + F ++ Y +NG +
Sbjct: 104 EENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLI 163
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TC 337
AR +FD + K++VSW AMI+G+ Q + A LF M C
Sbjct: 164 ISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGC 223
Query: 338 KNVASW----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
+ + N ++T Y++ A +F +M D +S+
Sbjct: 224 TKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFN 283
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++I+G AQ G+S+ +L LF +MKR + + S+LS CA+ +L G+QLH ++K
Sbjct: 284 SLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKA 343
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G + V ALL +Y C ++ A+ F ++V+ WN M+ + + ++ +F
Sbjct: 344 GISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIF 403
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
M+ G+ P+ T IL C+ G ++ G E ++ G N + ++D+ +
Sbjct: 404 RQMQIKGLIPNQFTYPSILRTCTSVGALDLG-EQIHTQVIKTGFQFNVYVCSVLIDMYAK 462
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
G+LD A +++ + E D +W AL+ Y + L +A + EM
Sbjct: 463 HGKLDTAHVILRTLT-EDDVVSWTALISG---YAQHNLFAEALKHFKEM 507
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 42/312 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D WN I+ ++G C+ AL VF M R S ++ + +S + +Q+
Sbjct: 581 DSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIH 640
Query: 116 DQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ +R D+ N +I+ Y + S+ AR F MP+++ VSWN M++GY+Q+GY +
Sbjct: 641 AMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGN 700
Query: 172 AARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFES----------KANWEVV 217
A +F++M + N +++ G+L+A G + + FES A++ V
Sbjct: 701 EAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACV 760
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYA--QNNYLAE--AQRLFEE 272
GF+ + R K+I + MP+ D W T+++ +N + E AQ L E
Sbjct: 761 VDLISRAGFLSRAR----KFI-EEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLEL 815
Query: 273 APVKDVFTWTAMVSGYVQNGK---VDEARMIF--DAMPEKNTVSW----NAMIAGYVQTK 323
P +D T+ + + Y +GK D+ R + + ++ SW N++ A YV +
Sbjct: 816 EP-EDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDR 874
Query: 324 RMDMARELFEAM 335
+A +++E +
Sbjct: 875 LHPLADKIYEFL 886
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 22/269 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N ++ + R G A F + + S+S+N +ISG+ +G + A +VF QM
Sbjct: 550 DLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMN 609
Query: 120 QRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYAD 171
+ L ++ +S ++ + + M+ KR D+ N +++ YA+ G +
Sbjct: 610 RAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIE 669
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQK 230
ARR F M EKN++SWN ++ Y Q+G EA LFE K E+ + + +G
Sbjct: 670 DARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACS 729
Query: 231 RLG---DAKWIFDRMP-----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTW 281
+G F+ M V + ++ ++ +L+ A++ EE P++ D W
Sbjct: 730 HVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIW 789
Query: 282 TAMVSGYV--QNGKVDE--ARMIFDAMPE 306
++S +N +V E A+ + + PE
Sbjct: 790 RTLLSACTVHKNVEVGEFAAQHLLELEPE 818
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 108/237 (45%), Gaps = 9/237 (3%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ G N + +L C N SL K+LHG+++K+GF + N L+ +Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
++ FE++ ++ V SW+ +I+G+ L LF M + P +I+ +L A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS + + E ++ +G++ + ++ L + G + A+ + N+ D+
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLC-TKDSV 179
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+W A++ + + E+A + EM AG++ Y S +K++L
Sbjct: 180 SWVAMISG---FSQNGYEEEAIHLFCEM--HTAGIF---PTPYVFSSVLSGCTKIKL 228
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D DI N IT + + G + A F MP ++ VS+NAMI+GY +G + A
Sbjct: 645 KRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVN 704
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKS----LSAARNLFEMMPKR-----DVVSWNTMLSGY 164
+F++M Q + +V G + S ++ FE M K + ++
Sbjct: 705 LFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLI 764
Query: 165 AQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIE 202
++ G+ AR+ + M +E + W LL+A + +E
Sbjct: 765 SRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVE 803
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/846 (35%), Positives = 434/846 (51%), Gaps = 129/846 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DIR T +R G A + R V YNA+I+ +G + A + + QM
Sbjct: 318 DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377
Query: 120 Q---------------------------------------RDLVSWNVMISGYVRNKSLS 140
D+ N +IS Y R L
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AR LF MPKRD++SWN +++GYA+ A +++ +M ++ +++ LL+A
Sbjct: 438 RARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACT 497
Query: 197 QNGRIEEACMLFES------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+ + M+ E K+N + N+LM + + + +A+ +F+ RD +SW
Sbjct: 498 NSSAYSDGKMIHEDILRSGIKSNGHLA--NALMNMYRRCGSIMEAQNVFEGTRARDIISW 555
Query: 251 NTMITGYAQNNYLAEAQRLFEE------APVK---------------------------- 276
N+MI G+AQ+ A +LF E P K
Sbjct: 556 NSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIE 615
Query: 277 -----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
DV A+++ Y++ G + +A +F ++ +N +SW AMI G+ A EL
Sbjct: 616 SGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFEL 675
Query: 332 FEAM-----------------TCKNVASW----------------------NTMITGYAQ 352
F M C + A N +I+ Y++
Sbjct: 676 FWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSK 735
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG +T AR +FD+MP D +SW +IAGYAQ+G +L+ +M+ G LN+ F S+
Sbjct: 736 SGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSI 795
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L+ C++ ++LE GK++H ++VK + VG AL+ MY KCGS+EEA F+ +K+V
Sbjct: 796 LNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNV 855
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
++WN MI YA+HG AL F M GIKPD T ILSAC+H+GLV +G F S
Sbjct: 856 VTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSS 915
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ +G+ P +HY C+V LLGRAGR EA+ L+ MPF PDAA W LLGACR++G
Sbjct: 916 LESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVA 975
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
LAE AA ++ N +YVLLSN+YAA+GRW DV+K+R M RG++K G SW+EV
Sbjct: 976 LAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVD 1035
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
N +H F D HPE IY L+ L ++++ G+ T+ VLH++ +E +E L HSE
Sbjct: 1036 NIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSE 1095
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
+LA+AYG+L P G PIR+ KNLR+C DCH A K ISK+VGR II RD+NRFH F G C
Sbjct: 1096 RLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKC 1155
Query: 773 SCGDYW 778
SC D+W
Sbjct: 1156 SCEDFW 1161
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 170/674 (25%), Positives = 298/674 (44%), Gaps = 132/674 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI N+ I +++ A VF MPRR +S+N++IS Y G A Q+F++M
Sbjct: 116 DIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 175
Query: 120 ---------------------------------------QRDLVSWNVMISGYVRNKSLS 140
QRD N +++ Y + + L
Sbjct: 176 TAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLP 235
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
+AR +F + +RDVVS+NTML YAQ Y + +F +M + +++++ LL A+
Sbjct: 236 SARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFT 295
Query: 197 QNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
++E + + N ++ +L FV+ + AK + RD V +N
Sbjct: 296 TPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNA 355
Query: 253 MITGYAQNNYLAEA---------------------------------------QRLFEEA 273
+I AQ+ + EA + E
Sbjct: 356 LIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG 415
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
DV +++S Y + G + AR +F+ MP+++ +SWNA+IAGY + + A +L++
Sbjct: 416 HSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYK 475
Query: 334 AM-----------------TCKNVASW----------------------NTMITGYAQSG 354
M C N +++ N ++ Y + G
Sbjct: 476 QMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCG 535
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
I A+N+F+ D ISW ++IAG+AQ G E + +LF+EMK+ G ++ F SVL
Sbjct: 536 SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
C N +LELG+Q+H +++ G + +GNAL+ MY +CGS+++AY F + ++V+S
Sbjct: 596 GCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMS 655
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF-YSM 533
W MI G+A G + A LF M+ G KP T IL AC + +++G + + +
Sbjct: 656 WTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHIL 715
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
N Y + ++ ++ ++G + +A+ + MP D +W ++ Y + L
Sbjct: 716 NSGYEL--DTGVGNALISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAG---YAQNGL 769
Query: 594 AEKAAEVIFEMEPE 607
A + ++M+ +
Sbjct: 770 GGTALQFAYQMQEQ 783
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/631 (25%), Positives = 286/631 (45%), Gaps = 95/631 (15%)
Query: 108 LDPARQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
L A+++ QM + D+ N++I+ YV+ +S+S A +F MP+RDV+SWN+++S
Sbjct: 98 LAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISC 157
Query: 164 YAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
YAQ G+ A ++F+ M ++I++ +L A +E + E+ +
Sbjct: 158 YAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRD 217
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----E 271
NSL+ + K + L A+ +F + RD VS+NTM+ YAQ Y+ E LF
Sbjct: 218 PRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSS 277
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
E D T+ ++ + +DE + I A+ G R+ A
Sbjct: 278 EGIPPDKVTYINLLDAFTTPSMLDEGKRIHKL----------AVNEGLNSDIRVGTA--- 324
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
+ T + + G++ A+ + D + + A+IA AQ G+ E++
Sbjct: 325 --------------LATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAF 370
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+ +M+ G +NR+ + SVL+ C+ +L G+ +H + +VG + +GN+L+ MY
Sbjct: 371 EQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMY 430
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
+CG + A F + +D+ISWN +IAGYAR +A+ L++ M++ G+KP +T +
Sbjct: 431 ARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFL 490
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL------ 565
+LSAC+++ G + R G+ N ++++ R G + EAQN+
Sbjct: 491 HLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRA 549
Query: 566 ----------------------------MKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
MK EPD T+ ++L C+ EL +
Sbjct: 550 RDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI 609
Query: 598 AEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
+I E + + + L N+Y G D +V +R R V SW
Sbjct: 610 HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNV-----MSW-------- 656
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
T +G +DR A+ EL ++++ DGF
Sbjct: 657 TAMIGGFADQGEDR-KAF--ELFWQMQNDGF 684
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 281/750 (37%), Positives = 427/750 (56%), Gaps = 68/750 (9%)
Query: 96 NAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
N+ + G +L+ G++D AR+ F+++ +D+ WN+M+SGY A M
Sbjct: 224 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMK 283
Query: 151 ----KRDVVSWNTMLSGYAQNGYADAARRIFDRM-----LEKNEISWNGLLAAYVQNGRI 201
K D V+WN ++SGYAQ+G + A + F M + N +SW L+A QNG
Sbjct: 284 LSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343
Query: 202 EEACMLFE----------------------------------------SKANWEVVSWNS 221
EA +F + + +++ NS
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----D 277
L+ + K + + A+ F + D VSWN M+ GYA EA L E + D
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFE 333
+ TW +V+G+ Q G A F M + NT + + +A Q + + + +E+
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEI-H 522
Query: 334 AMTCKNVASWNT-----MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+N +T +I+ Y+ + A ++F + D + W +II+ AQSG S
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSV 582
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++L L EM +N S L C+ LA+L GK++H +++ G + F+ N+L+
Sbjct: 583 NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLI 642
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY +CGS++++ F+ + +D++SWN MI+ Y HGFG DA+ LF+ +T+G+KP+ I
Sbjct: 643 DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHI 702
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T +LSACSH+GL+E+G +YF M +Y + P + Y CMVDLL RAG+ +E ++
Sbjct: 703 TFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEK 762
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MPFEP+AA WG+LLGACR++ +LAE AA +FE+EP+++G YVL++N+Y+A+GRW D
Sbjct: 763 MPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDA 822
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+K+R M++RGV K G SW+EV+ K+H+F VGDT HP ++I A +E L F +K+ G+V
Sbjct: 823 AKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYV 882
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T VL DV E+EKE L HSEK+A+A+G++S AG P+R++KNLRVC DCH+A K I
Sbjct: 883 PDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFI 942
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SK+ R II+RDN RFHHF G CSCGDYW
Sbjct: 943 SKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/553 (25%), Positives = 251/553 (45%), Gaps = 63/553 (11%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRD 153
++ Y G ++ AR++FD+M +R++ SW ++ Y LF +M + D
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 189
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFE 209
+ + ++ + ++D ML E N +L +++ GR++ A FE
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAE 265
+V WN ++ G+ + A M + D+V+WN +I+GYAQ+ E
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309
Query: 266 AQRLF-EEAPVKD----VFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVS--- 311
A + F E +KD V +WTA+++G QNG EA +F M P T++
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAV 369
Query: 312 -------------------------------WNAMIAGYVQTKRMDMARELFEAMTCKNV 340
N+++ Y + + +++AR F + ++
Sbjct: 370 SACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
SWN M+ GYA G A L M + D I+W ++ G+ Q G + +L F
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQR 489
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M G N + + L+ C + +L+LGK++HG +++ E VG+AL+ MY C S
Sbjct: 490 MHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDS 549
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+E A F E+ +DV+ WN++I+ A+ G +AL L M ++ + +TMV L A
Sbjct: 550 LEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPA 609
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS + +G E + R G+ + ++D+ GR G + +++ + MP + D
Sbjct: 610 CSKLAALRQGKEIHQFIIR-CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLV 667
Query: 577 TWGALLGACRLYG 589
+W ++ ++G
Sbjct: 668 SWNVMISVYGMHG 680
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ S+L C L +L LG Q+H QLV G + F+G+ LL +YC+ G VE+A F+++
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+++V SW ++ Y G ++ + LF M G++PD + ACS G +
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
Y G NS ++D+ + GR+D A+ + + F+ D W ++ Y
Sbjct: 212 -VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSG---Y 266
Query: 589 GKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
+KA + I +M +P+ ++S YA SG++ + SK L+M
Sbjct: 267 TSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEM 317
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 171/391 (43%), Gaps = 38/391 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + + A F + + VS+NAM++GY L G + A ++ +
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454
Query: 118 MP----QRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQN 167
M + D+++WN +++G+ + AA F+ M P +S G +N
Sbjct: 455 MKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRN 514
Query: 168 GYADAARRIFDRMLEKNEISW-----NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
+ I +L +N I + L++ Y +E AC +F + +VV WNS+
Sbjct: 515 --LKLGKEIHGYVL-RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSI 571
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITGYAQNNYLA------EAQRLFEEAPV 275
+ + R +A + M + + EV+ TM++ + LA E + +
Sbjct: 572 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL 631
Query: 276 KDV-FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY-VQTKRMDMAR--EL 331
F +++ Y + G + ++R IFD MP+++ VSWN MI+ Y + MD +
Sbjct: 632 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQ 691
Query: 332 FEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQSG 385
F M K N ++ +++ + SG I F M + +A ++ +++G
Sbjct: 692 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAG 751
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
++L FIE + N + + S+L C
Sbjct: 752 QFNETLE-FIEKMPF--EPNAAVWGSLLGAC 779
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 291/741 (39%), Positives = 419/741 (56%), Gaps = 60/741 (8%)
Query: 98 MISGYLLNGQLDP---------ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
M S YL+N ++ AR++FD+MP R SWN ++S Y + + + F+
Sbjct: 46 MFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQ 105
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA 204
+P+RD VSW TM+ GY G A R+ M +E + + +LA+ +E
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETG 165
Query: 205 ----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ + V NSL+ + K AK++FDRM VRD SWN MI + Q
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS-- 311
+ A FE+ +D+ TW +M+SG+ Q G A IF M P++ T++
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 312 -------------------------------WNAMIAGYVQTKRMDMARELFEAMTCKN- 339
NA+I+ Y + ++ AR L E K+
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 340 -VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ + ++ GY + G++ A+N+F + D ++W A+I GY Q G +++ LF M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G+R N ++LS ++LASL GKQ+HG VK G V NAL+ MY K G++
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 459 EAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A AF+ I ++D +SW +MI A+HG ++AL LFE+M G++PD IT VG+ SAC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+H GLV +G +YF M +IP HY CMVDL GRAG L EAQ ++ MP EPD T
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
WG+LL ACR++ +L + AAE + +EPEN+G Y L+NLY+A G+W + +K+R M+D
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD 697
VKK G+SW+EV++KVH F V D HPEK+ IY ++++ ++K+ G+V T VLHD
Sbjct: 646 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 705
Query: 698 VGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
+ EE KE +LR+HSEKLA+A+G++S P +R+MKNLRVC DCH AIK ISK+VGR II
Sbjct: 706 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 765
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
+RD RFHHF G CSC DYW
Sbjct: 766 VRDTTRFHHFKDGFCSCRDYW 786
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/514 (24%), Positives = 231/514 (44%), Gaps = 92/514 (17%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ + + G DS F+ +P+R SVS+ MI GY GQ A +V M + +
Sbjct: 83 WNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI 142
Query: 124 ----VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARR 175
+ +++ + + + + + K +V N++L+ YA+ G A+
Sbjct: 143 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF--------- 226
+FDRM+ ++ SWN ++A ++Q G+++ A FE A ++V+WNS++ GF
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 227 --VKQKRLGDAKWIFDRMPVRDEVS-----------------------------WNTMIT 255
+ K L D+ DR + +S N +I+
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 256 GYAQNNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
Y++ + A+RL E+ KD + +TA++ GY++ G +++A+ IF ++ +++ V+W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 314 AMIAGYVQTKRMDMARELFEAMT------------------------------------- 336
AMI GY Q A LF +M
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 337 --CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRL 393
+V+ N +IT YA++G IT A FD + + D +SW ++I AQ G++E++L L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYC 452
F M G R + + V S C + + G+Q + V A +V ++
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 453 KCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ G ++EA E++ ++ DV++W ++++ H
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 194/457 (42%), Gaps = 87/457 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI WN I HM+ G D A+ F M R V++N+MISG+ G A +F +M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ L+S + V LSA NL ++ + + S + + +G+ +G
Sbjct: 271 RDSLLSPDRFTLASV----LSACANLEKLCIGKQIHS-HIVTTGFDISG----------- 314
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKA--NWEVVSWNSLMGGFVKQKRLGDAKW 237
I N L++ Y + G +E A L E + + ++ + +L+ G++K + AK
Sbjct: 315 ------IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------------------------- 270
IF + RD V+W MI GY Q+ EA LF
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 271 ------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIA 317
+ + V A+++ Y + G + A FD + E++TVSW +MI
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 318 GYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCI- 372
Q + A ELFE M + + ++ + + +G + R FD M D I
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548
Query: 373 ----SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLEL 424
+A ++ + ++G L E + + E++ P + S+LS C +++L
Sbjct: 549 PTLSHYACMVDLFGRAG-------LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 425 GKQLHGQLVKVGFE-AGCFVGNALLVMYCKCGSVEEA 460
GK +L+ + E +G + +AL +Y CG EEA
Sbjct: 602 GKVAAERLLLLEPENSGAY--SALANLYSACGKWEEA 636
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 26/302 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D I + + +++ G + A ++F S+ R V++ AMI GY +G A +F
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 118 MP---QR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGY 169
M QR + + M+S SLS + + K V N +++ YA+ G
Sbjct: 404 MVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGN 463
Query: 170 ADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESK----ANWEVVSWNSLMG 224
+A R FD + E++ +SW ++ A Q+G EEA LFE+ + +++ +
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEV-----SWNTMITGYAQNNYLAEAQRLFEEAPVK-DV 278
+ + FD M D++ + M+ + + L EAQ E+ P++ DV
Sbjct: 524 ACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDV 583
Query: 279 FTWTAMVSGY-----VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
TW +++S + GKV R++ + +N+ +++A+ Y + + A ++ +
Sbjct: 584 VTWGSLLSACRVHKNIDLGKVAAERLLL--LEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 334 AM 335
+M
Sbjct: 642 SM 643
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 279/751 (37%), Positives = 434/751 (57%), Gaps = 57/751 (7%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
F PR + N +I Y + +L+ ARQ+FD++ + D ++ M+SGY + ++ A
Sbjct: 42 TFGFQPRAHIL--NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLA 99
Query: 143 RNLFEMMP--KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
R +FE P RD V +N M++G++ N +A +F +M + + ++ +LA
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 197 QNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVK----QKRLGDAKWIFDRMPVRDE 247
E+ C+ F +S A + N+L+ + K L A+ +FD + +DE
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEA----RMIFD 302
SW TM+TGY +N Y + L E + + AM+SGYV G EA R +
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 303 AMPEKNTVSW----------------------------------NAMIAGYVQTKRMDMA 328
+ E + ++ N++++ Y + + D A
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEA 339
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
R +FE M K++ SWN +++GY SG I A+ +F M + + +SW +I+G A++G+ E
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ L+LF MKR G F+ + +CA L + G+Q H QL+K+GF++ GNAL+
Sbjct: 400 EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG VEEA F + D +SWN +IA +HG G +A+ ++E M GI+PD I
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T++ +L+ACSH GLV++G +YF SM Y + P + HY ++DLL R+G+ +A++++++
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
+PF+P A W ALL CR++G EL AA+ +F + PE+ G Y+LLSN++AA+G+W +V
Sbjct: 580 LPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEV 639
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++VR MRDRGVKK SW+E++ +VHTF V DT HPE + +Y YL++L ++++ G+V
Sbjct: 640 ARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYV 699
Query: 689 YSTKLVLHDV-GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
T VLHDV + KE ML HSEK+AVA+G++ +P G IR+ KNLR C DCHN +
Sbjct: 700 PDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRF 759
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S +V R IILRD RFHHF G CSCG++W
Sbjct: 760 LSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 163/403 (40%), Gaps = 92/403 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS-VSYNAMISGYL--------------- 103
D R W +T +++NG D + M V+YNAMISGY+
Sbjct: 218 DERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRM 277
Query: 104 --------------------LNGQLDPARQVFDQMPQRDLVSW---NVMISGYVRNKSLS 140
G L +QV + +R+ S+ N ++S Y +
Sbjct: 278 VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFD 337
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
AR +FE MP +D+VSWN +LSGY +G+ A+ IF M EKN +SW +++ +NG
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 201 IEEACMLFE--SKANWEVVSW-------------------------------------NS 221
EE LF + +E + N+
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA 457
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----D 277
L+ + K + +A+ +F MP D VSWN +I Q+ + AEA ++EE K D
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA-----MIAGYVQTKRMDMARELF 332
T +++ G VD+ R FD+M + A +I ++ + A +
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 333 EAMTCKNVAS-WNTMITGYAQSGE----ITHARNLFDRMPQHD 370
E++ K A W +++G G I A LF +P+HD
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 35/159 (22%)
Query: 409 FTSVLSTCANL--ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+ + L C L SL+L + +HG ++ GF+ + N L+ +YCK + A F+E
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 467 IVD---------------------------------KDVISWNTMIAGYARHGFGKDALM 493
I + +D + +N MI G++ + G A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
LF MK G KPD+ T +L+ + EK F++
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHA 173
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D + N IT + + G + A VF +MP SVS+NA+I+ +G A V+++
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M ++ + + D ++ T+L+ + G D R+ F
Sbjct: 509 MLKKGI---------------------------RPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 178 DRMLEKNEIS-----WNGLLAAYVQNGRIEEACMLFES---KANWEVVSWNSLMGG 225
D M I + L+ ++G+ +A + ES K E+ W +L+ G
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEI--WEALLSG 595
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 285/781 (36%), Positives = 425/781 (54%), Gaps = 90/781 (11%)
Query: 88 PRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGYVRNKSLSAAR 143
P+ S Y ++ + L +QV + + + ++ N ++ Y S++ AR
Sbjct: 24 PQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEAR 83
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA----Y 195
LF+ + VVSWN M+SGYA G A A +F M LE ++ ++ +L+A
Sbjct: 84 QLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPA 143
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
V N E + E+ + N+L+ + K + DA+ +FD M RDEVSW T+
Sbjct: 144 VLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 203
Query: 256 GYAQNNYLAEAQRLF---------------------------------------EEAPVK 276
YA++ Y E+ + + E
Sbjct: 204 AYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHS 263
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
DV TA+ Y++ G +AR +F+ + ++ ++WN MI G+V + +++ A F M
Sbjct: 264 DVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRML 323
Query: 337 CKNVAS---------------------------------------WNTMITGYAQSGEIT 357
+ VA N +I Y+++G +
Sbjct: 324 EEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMK 383
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR +FDRMP+ D +SW ++ YA +S F +M + G + N+ + VL C+
Sbjct: 384 DARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACS 443
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
N +L+ GK++H ++VK G A V NAL+ MY KCGSVE+A FE + +DV++WNT
Sbjct: 444 NPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNT 503
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I G ++G G +AL +E MK+ G++P+ T V +LSAC LVE+G F M++DY
Sbjct: 504 LIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDY 563
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G++P KHY CMVD+L RAG L EA++++ +P +P AA WGALL ACR++ E+ E+A
Sbjct: 564 GIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERA 623
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE ++EP+NAG+YV LS +YAA+G W DV+K+R M++RGVKK G SW+E+ +VH+
Sbjct: 624 AEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHS 683
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP IYA LE L+ ++K G+V T+ V+HD+ +E KE + +HSEKLA+A
Sbjct: 684 FVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIA 743
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
YG++S P G PIR+ KNLRVC DCH A K ISKI R II RD +RFHHF G CSCGDY
Sbjct: 744 YGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDY 803
Query: 778 W 778
W
Sbjct: 804 W 804
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 5/211 (2%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
+ R G +++ + +L +C L +GKQ+H +++ G + ++ N LL +Y CGS
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
V EA F++ +K V+SWN MI+GYA G ++A LF M+ ++PD T V ILSA
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS ++ G E + + G+ ++ ++ + + G + +A+ + M D
Sbjct: 139 CSSPAVLNWGREIHVRV-MEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA-SRDEV 196
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+W L GA Y ++ E++ + M E
Sbjct: 197 SWTTLTGA---YAESGYGEESLKTYHAMLQE 224
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 51/298 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+R +M+ G A VF + R +++N MI G++ +GQL+ A F +M
Sbjct: 264 DVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRML 323
Query: 119 -----PQR---------------------------------DLVSWNVMISGYVRNKSLS 140
P R D+ N +I+ Y + S+
Sbjct: 324 EEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMK 383
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
AR +F+ MPKRDVVSW T+L YA + F +ML++ N+I++ +L A
Sbjct: 384 DARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACS 443
Query: 197 QNGRI----EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+ E + ++ ++ N+LM + K + DA +F+ M +RD V+WNT
Sbjct: 444 NPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNT 503
Query: 253 MITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
+I G QN EA + +E E + T+ ++S V+E R F M +
Sbjct: 504 LIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSK 561
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/590 (44%), Positives = 375/590 (63%), Gaps = 3/590 (0%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK-RLGDAKWIFDRMPVRDEVSW 250
+AA V++G + A F S ++N L+ G+ + RL DA+ +FDR+P D VS+
Sbjct: 24 VAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDVVSY 83
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
NT++ + + A+RLF PV+DV +W MVSG ++G V+EA+++F AMP +N+V
Sbjct: 84 NTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSV 143
Query: 311 SWNAMIAGYVQTKRMDMARELFE-AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
SWNAM++G+ + M A E F A ++ W M++GY G + A F+ MP
Sbjct: 144 SWNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVR 203
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQL 428
+ +SW A++AGY ++ +++D+LRLF M R + N S +SVL C+NL++L GKQ+
Sbjct: 204 NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI 263
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H +K+ VG +L+ MYCKCG + A F E+ +DV++WN MI+GYA+HG G
Sbjct: 264 HQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDG 323
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A+ LFE MK G++P+ IT V +L+AC HTGL + G + F M YG+ P HY+C
Sbjct: 324 KEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSC 383
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLL RAG+L+ A + +++MPFEP + +G LL ACR+Y E AE AA + E +P++
Sbjct: 384 MVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQS 443
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
AG YV L+N+YA + +W DVS+VR M+D V K GYSW+E++ +H F D LHP+
Sbjct: 444 AGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQL 503
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
I+ L +L ++K+ G+V VLHDV E K ML HSEKLA+A+G++S G
Sbjct: 504 YLIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMT 563
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+R+ KNLRVC DCHNA K IS I R IILRD RFHHF GG CSC DYW
Sbjct: 564 LRIFKNLRVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 202/421 (47%), Gaps = 58/421 (13%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL-LNGQLDPARQVFDQMPQRDLVS 125
A+ +R+G A F S PR+++ +YN +++GY G+L AR +FD++P D+VS
Sbjct: 23 AVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDVVS 82
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
+N ++ + + AR LF MP RDV SWNTM+SG +++G + A+ +F M +N
Sbjct: 83 YNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNS 142
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWE-VVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
+SWN +++ + +G + A F + E V W +++ G++ + A F+ MPV
Sbjct: 143 VSWNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPV 202
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLF----EEAPV-----------------------KD 277
R+ VSWN ++ GY +N++ +A RLF EA V K
Sbjct: 203 RNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQ 262
Query: 278 VFTW-------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
+ W T++VS Y + G + A ++F M ++ V+WNAMI+GY Q
Sbjct: 263 IHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGD 322
Query: 325 MDMARELFEAMTCKNV-ASWNTMI---TGYAQSGEITHARNLFDRM-------PQHDCIS 373
A LFE M + V +W T + T +G F+ M P+ D
Sbjct: 323 GKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVD--H 380
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
++ ++ ++G E ++ M + S + ++L+ C +LE + G+L+
Sbjct: 381 YSCMVDLLCRAGKLERAVDFIRSMPF---EPHPSAYGTLLAACRVYKNLEFAELAAGKLI 437
Query: 434 K 434
+
Sbjct: 438 E 438
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 165/351 (47%), Gaps = 26/351 (7%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY 95
P + RHL + P P D+ +N + H +G D A +F SMP R S+
Sbjct: 62 PGRLADARHLFDRI---PTP----DVVSYNTLLLCHFASGDADGARRLFASMPVRDVASW 114
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDV 154
N M+SG +G ++ A+ VF MP R+ VSWN M+SG+ + +S A F P K D
Sbjct: 115 NTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWFRNAPEKEDA 174
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-----E 209
V W M+SGY G A + F+ M +N +SWN ++A YV+N ++A LF E
Sbjct: 175 VLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVRE 234
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+ + +S++ G LG K W + R+ ++++ Y + L+
Sbjct: 235 ANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSS 294
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQ 321
A LF E +DV W AM+SGY Q+G EA +F+ M E N +++ ++ +
Sbjct: 295 ACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIH 354
Query: 322 TKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
T D + FE M V ++ M+ ++G++ A + MP
Sbjct: 355 TGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMP 405
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 295/839 (35%), Positives = 451/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD-- 122
N I + +NG D A VF + + SVS+ AMISG NG+ D A +F QM +
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 123 ----------------------------LVSW---------NVMISGYVRNKSLSAARNL 145
+V W N +++ Y R +L AA +
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQI 270
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM------------------------- 180
F M +RD +S+N+++SG AQ G++D A ++F++M
Sbjct: 271 FSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAG 330
Query: 181 --------------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
+ + I LL YV+ IE A F + VV WN ++ +
Sbjct: 331 YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390
Query: 227 VKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DV 278
+ L ++ WIF +M + ++ ++ +++ L +++ + +V
Sbjct: 391 GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+ + ++ Y ++G++D AR I + E++ VSW AMIAGY Q A +LF+ M +
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQ 510
Query: 339 NVAS---------------------------------------WNTMITGYAQSGEITHA 359
+ S N +++ YA+ G A
Sbjct: 511 GIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDA 570
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F+++ D ISW A+I+G+AQSG+ E++L++F +M + G N F S +S AN
Sbjct: 571 YLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANT 630
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++ GKQ+H ++K G+++ N L+ +Y KCGS+E+A F E+ +K+V+SWN MI
Sbjct: 631 ANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMI 690
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
GY++HG+G +A+ LFE MK +G+ P+ +T VG+LSACSH GLV +G YF SM++++G+
Sbjct: 691 TGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGL 750
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P +HY C+VDLLGRA L A+ ++ MP EPDA W LL AC ++ E+ E AA
Sbjct: 751 VPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAAR 810
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPE++ YVLLSN+YA SG+W + R M+DRGVKK G SW+EV+N +H F
Sbjct: 811 HLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFF 870
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP ++IY Y+++L + + G+V +L+DV +E+K+ HSEKLAVA+G
Sbjct: 871 VGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFG 930
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+ PIRV+KNLRVC DCHN IK +SKI R I++RD RFHHF GG CSC DYW
Sbjct: 931 LLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 169/691 (24%), Positives = 293/691 (42%), Gaps = 168/691 (24%)
Query: 65 NVAITTHMRNGCCDSA-------LH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
NV + GC +S LH +F S V + +I YL +G++D A ++F
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV--------------------- 154
D +P ++ WN +ISG + K S LF +M +V
Sbjct: 69 DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPF 128
Query: 155 -------------------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAY 195
+ N ++ Y++NG+ D A+ +F+R+ K+ +SW +++
Sbjct: 129 QVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGL 188
Query: 196 VQNGRIEEACMLF------------------------------ESKANWEVVSW------ 219
QNGR +EA +LF + + +V W
Sbjct: 189 SQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSET 248
Query: 220 ---NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
N+L+ + + L A+ IF +M RD +S+N++I+G AQ + A +LFE+ +
Sbjct: 249 FVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLD 308
Query: 277 ----DVFTWTAMVSG-----------------------------------YVQNGKVDEA 297
D T +++S YV+ ++ A
Sbjct: 309 CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETA 368
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCK-- 338
F +N V WN M+ Y Q + + +F M TC
Sbjct: 369 HEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSL 428
Query: 339 --------------------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
NV + +I YA+ GE+ AR + R+ + D +SW A+I
Sbjct: 429 GALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMI 488
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
AGY Q ++L+LF EM+ G R + F+S +S CA + +L G+Q+H Q G+
Sbjct: 489 AGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYS 548
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+GNAL+ +Y +CG ++AY AFE+I KD ISWN +I+G+A+ G ++AL +F M
Sbjct: 549 EDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQM 608
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G++ + T +SA ++T +++G + ++M G ++ ++ L + G
Sbjct: 609 NQAGVEANLFTFGSAVSATANTANIKQGKQ-IHAMMIKTGYDSETEASNVLITLYSKCGS 667
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+++A+ MP E + +W A++ +G
Sbjct: 668 IEDAKREFFEMP-EKNVVSWNAMITGYSQHG 697
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 159/396 (40%), Gaps = 80/396 (20%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I Y GE+ +A LFD +P + W +I+G + L LF M +
Sbjct: 51 LIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPD 110
Query: 406 RSPFTSVLSTCAN-LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
S F SVL C+ A ++ +Q+H +++ GF + V N L+ +Y K G V+ A F
Sbjct: 111 ESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVF 170
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E + KD +SW MI+G +++G +A++LF M + P +LSAC+ L +
Sbjct: 171 ERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFK 230
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTC--MVDLLGRAGRL----------------------- 559
G E + +G+ +S+ + C +V L R G L
Sbjct: 231 LG-EQLHGFIVKWGL--SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLIS 287
Query: 560 --------DEAQNLMKNMPFE---PDAATWGALLGACR---------------------- 586
D A L + M + PD T +LL AC
Sbjct: 288 GLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSS 347
Query: 587 ----------LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK---VRL 633
LY K E A E E EN VL + + A G+ G++S+ + L
Sbjct: 348 DLIIEGSLLDLYVKCFDIETAHEYFLTTETENV---VLWNVMLVAYGQLGNLSESYWIFL 404
Query: 634 KMRDRGV--KKVTGYSWLEVQNKVHTFSVGDTLHPE 667
+M+ G+ + T S L + +G+ +H +
Sbjct: 405 QMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQ 440
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 147/339 (43%), Gaps = 69/339 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N ++ + R G A F + + ++S+NA+ISG+ +G + A QVF QM
Sbjct: 550 DLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMN 609
Query: 120 QR----DLVSW-----------------------------------NVMISGYVRNKSLS 140
Q +L ++ NV+I+ Y + S+
Sbjct: 610 QAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIE 669
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A+ F MP+++VVSWN M++GY+Q+GY A +F+ M L N +++ G+L+A
Sbjct: 670 DAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACS 729
Query: 197 QNGRIEEACMLFESKAN--------WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DE 247
G + E F S + V L+G + L A+ + MP+ D
Sbjct: 730 HVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLG---RAALLCCAREFIEEMPIEPDA 786
Query: 248 VSWNTMITGYA--QNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+ W T+++ +N + E A+ L E P +D T+ + + Y +GK D
Sbjct: 787 MIWRTLLSACTVHKNIEIGEFAARHLLELEP-EDSATYVLLSNMYAVSGKWDYRDRTRQM 845
Query: 304 MPEKNTV-----SW----NAMIAGYVQTKRMDMARELFE 333
M ++ SW N++ A +V + +A +++E
Sbjct: 846 MKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYE 884
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ G R N + + C N SL K+LH ++ K GF+ +G+ L+ +Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
V+ A F++I +V WN +I+G L LF M T + PD+ T +L A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS + TE ++ +G + ++DL + G +D A+ + + + F D+
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL-FLKDSV 179
Query: 577 TWGALLGACRLYGKTELA 594
+W A++ G+ + A
Sbjct: 180 SWVAMISGLSQNGREDEA 197
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D + NV IT + + G + A F MP ++ VS+NAMI+GY +G A
Sbjct: 645 KTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVS 704
Query: 114 VFDQMPQRDLVSWNVMISGYVR--------NKSLSAARNLFE---MMPKRDVVSWNTMLS 162
+F++M Q L+ +V G + N+ LS R++ + ++PK + L
Sbjct: 705 LFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLL 764
Query: 163 GYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIE 202
G A AR + M +E + + W LL+A + IE
Sbjct: 765 GRA--ALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIE 803
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/858 (34%), Positives = 468/858 (54%), Gaps = 97/858 (11%)
Query: 16 LHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNG 75
LH H + P+ N + + R +R + + D+ W+ ++ +++NG
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFG-YARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 76 CCDSALHVFN---------------------SMPRRSSVS------------------YN 96
+ AL VFN SM R ++ N
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV- 155
++ Y G LD +R++F + +R++VSWN + S YV+++ A LF+ M + ++
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 156 ---SWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLF 208
S + +L+ A D R+I ML + ++ S N L+ Y + G IE A +F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLA 264
+ A+ +VVSWN+++ G V A + D M + + ++ + A +
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF-K 300
Query: 265 EAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
E R + +K D+F +V Y + +D+AR +D+MP+K+ ++WNA+I+GY
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360
Query: 320 VQTKRMDMARELFEAM--------------TCKNVASW---------------------- 343
Q A LF M K+VAS
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420
Query: 344 ---NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
N+++ Y + I A +F+ D +++ ++I Y+Q G E++L+L+++M+
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
+ + +S+L+ CANL++ E GKQLH +K GF F N+L+ MY KCGS+E+A
Sbjct: 481 DIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDA 540
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
AF EI ++ ++SW+ MI GYA+HG GK+AL LF M G+ P+ IT+V +L AC+H
Sbjct: 541 DRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHA 600
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
GLV +G +YF M +G+ P +HY CM+DLLGR+G+L+EA L+ ++PFE D WGA
Sbjct: 601 GLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGA 660
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
LLGA R++ EL +KAA+++F++EPE +G +VLL+N+YA++G W +V+KVR M+D V
Sbjct: 661 LLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKV 720
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGE 700
KK G SW+E+++KV+TF VGD H D IYA L++L L + G+ ++ +H+V +
Sbjct: 721 KKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDK 780
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
EKE +L +HSEKLAVA+G+++ P G PIRV KNLR+C DCH K + KIV R II+RD
Sbjct: 781 SEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRD 840
Query: 761 NNRFHHFSGGSCSCGDYW 778
NRFHHF GSCSCGDYW
Sbjct: 841 INRFHHFKDGSCSCGDYW 858
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 15/183 (8%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+LH L+K GF + N L+ +Y KC A +E + DV+SW+++++GY ++G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACS-----HTGLVEKGTEYFYSMNRDYGVIP 541
F ++AL++F M +G+K ++ T +L ACS + G G D G +
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESD-GFVA 120
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
N+ +V + + G LD+++ L + E + +W AL Y ++EL +A +
Sbjct: 121 NT-----LVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALFSC---YVQSELCGEAVGLF 171
Query: 602 FEM 604
EM
Sbjct: 172 KEM 174
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/774 (36%), Positives = 422/774 (54%), Gaps = 91/774 (11%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
N++I+ Y + A QVF +M RD+V+W+ MI+ Y N + A + FE M
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 150 PKR---------------------------------DVVSWNTMLSGYAQNGYADAARRI 176
P R DV +++ Y++ G A +
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN----------------------- 213
F +M E+N +SW ++ A Q+ ++ EA L+E
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274
Query: 214 ----------------WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+++ N+L+ + K + +A+ IFDRM RD +SW+ MI GY
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGY 334
Query: 258 AQNNY-----LAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMP--- 305
AQ+ Y + E +L E + VF T+ +++ +G +++ R I +
Sbjct: 335 AQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVG 394
Query: 306 -EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
E + A+ Y + + A ++F M KNV +W + ++ Y + G+++ A +F
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFS 454
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
MP + +SW +IAGYAQ+G L MK G + +R ++L C LA LE
Sbjct: 455 EMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLER 514
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GK +H + VK+G E+ V +L+ MY KCG V EA F+++ ++D ++WN M+AGY +
Sbjct: 515 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQ 574
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HG G +A+ LF+ M + P++IT+ ++SACS GLV++G E F M D+ + P +
Sbjct: 575 HGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQ 634
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CMVDLLGRAGRL EA+ +++MP EPD + W ALLGAC+ + +LAE+AA I E+
Sbjct: 635 HYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILEL 694
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
EP A +Y+ LSN+YA +GRW D +KVR M DRG+KK G S +E+ ++HTF D
Sbjct: 695 EPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCA 754
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
HPE D I+A LE L ++K+ G+ + VLHDV + +KE L +HSEKLA+AYG+L P
Sbjct: 755 HPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTP 814
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+G PIR+MKNLRVC DCH A K ISKI R I+ RD NRFH+F+ G+CSCGD+W
Sbjct: 815 SGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 183/439 (41%), Gaps = 127/439 (28%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ D+ IT + + G A VF+ M R+ VS+ A+I + +L+ A ++++Q
Sbjct: 189 ETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQ 248
Query: 118 MPQ---------------------------------------RDLVSWNVMISGYVRNKS 138
M Q D++ N +I+ Y + S
Sbjct: 249 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNS 308
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR-----RIFDRMLEK----NEISWN 189
+ AR +F+ M KRDV+SW+ M++GYAQ+GY D ++ +RM + N++++
Sbjct: 309 VQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFM 368
Query: 190 GLLAA-----------------------------------YVQNGRIEEACMLFESKANW 214
+L A Y + G I EA +F AN
Sbjct: 369 SILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK 428
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA---------- 264
VV+W S + ++K L A+ +F MP R+ VSWN MI GYAQN +
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 265 ------------------------EAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVD 295
E +L VK D T+++ Y + G+V
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVA 548
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQ----TKRMDMARELFEAMTCKNVASWNTMITGYA 351
EAR +FD M ++TV+WNAM+AGY Q + +D+ + + + N + +I+ +
Sbjct: 549 EARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACS 608
Query: 352 QSGEITHARNLFDRMPQHD 370
++G + R +F RM Q D
Sbjct: 609 RAGLVQEGREIF-RMMQED 626
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 2/202 (0%)
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
++G ++++L +K+ G +N + + V+ CA E GK +H QL ++G E +
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+GN+L+ Y K V A F + +DV++W++MIA YA + A FE M
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
I+P+ IT + IL AC++ ++EKG + +++ + G+ + T ++ + + G + A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRK-IHTIVKAMGMETDVAVATALITMYSKCGEISVA 211
Query: 563 QNLMKNMPFEPDAATWGALLGA 584
+ M E + +W A++ A
Sbjct: 212 CEVFHKMT-ERNVVSWTAIIQA 232
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 156/345 (45%), Gaps = 46/345 (13%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A VF+ M ++ V++ + +S Y+ G L A +VF +MP R++VSWN+MI+GY +N +
Sbjct: 418 AEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDI 477
Query: 140 SAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGL 191
L M + D V+ T+L + + + LE + + L
Sbjct: 478 VKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSL 537
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
+ Y + G++ EA +F+ +N + V+WN+++ G+ + +A +F RM +++ VS N
Sbjct: 538 IGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRM-LKERVSPN 596
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
+ T TA++S + G V E R IF M E ++
Sbjct: 597 EI--------------------------TLTAVISACSRAGLVQEGREIFRMMQEDFKMT 630
Query: 312 -----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEIT----HARN 361
+ M+ + R+ A E ++M C+ +++ W+ ++ + A +
Sbjct: 631 PRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHH 690
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+ + P + + + + YAQ+G +DS ++ M G + +R
Sbjct: 691 ILELEPSYASV-YITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDR 734
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 54/301 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
++ W ++ +++ G SA VF+ MP R+ VS+N MI+GY NG + ++ M
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 119 -----PQR---------------------------------DLVSWNVMISGYVRNKSLS 140
P R D V +I Y + ++
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVA 548
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
AR +F+ M RD V+WN ML+GY Q+G A +F RML++ NEI+ +++A
Sbjct: 549 EARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACS 608
Query: 197 QNGRIEEACMLFE-SKANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVS-W 250
+ G ++E +F + ++++ G V + RL +A+ MP ++S W
Sbjct: 609 RAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVW 668
Query: 251 NTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
+ ++ +N + A+R + E P + + + Y Q G+ D++ + M +
Sbjct: 669 HALLGACKSHNNVQLAERAAHHILELEP-SYASVYITLSNIYAQAGRWDDSTKVRRVMDD 727
Query: 307 K 307
+
Sbjct: 728 R 728
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 285/727 (39%), Positives = 417/727 (57%), Gaps = 24/727 (3%)
Query: 75 GCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
GC A +F+ +P RR++ ++N+++S Y +G+L A VF +MP RD VSW +MI G
Sbjct: 262 GCFREARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVG 321
Query: 133 YVRNKSL-SAARNLFEMMPKRDVVSWNTM---LSGYAQNGYADAARRIFDRMLEKNEISW 188
R+ A + +M+ + S T+ LS A R++ +++ S
Sbjct: 322 LNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSC 381
Query: 189 ----NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
N +L Y + G E A +FE V SWN ++ + Q R+ A +F+ M
Sbjct: 382 VPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVE 441
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFE-----EAPVKDVFTWTAMVSG-----YVQNGKV 294
R VSWNT+I GY QN A + F + D FT T+++S ++ GK
Sbjct: 442 RSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQ 501
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK--NVASWNTMITGYAQ 352
+ ++ MP + + NA+I+ Y ++ ++ AR + + NV S+ ++ GY +
Sbjct: 502 MHSYILRTGMPCSSQI-MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVK 560
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G+ AR +FD M D I+W A+I GY Q+G +++++ LF M G N +V
Sbjct: 561 LGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAV 620
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKD 471
LS CA+LA L+ GKQ+H + ++ E V NA++ +Y + GSV A F++I K+
Sbjct: 621 LSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKE 680
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
I+W +MI A+HG G+ A++LFE M VG+KPD IT VG+LSAC+H G V+KG Y+
Sbjct: 681 TITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYE 740
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
M ++G++P HY CMVDL RAG L EA ++ MP PD WG+LL ACR+
Sbjct: 741 QMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNA 800
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
+LAE AA + ++P N+G Y L+N+Y+A GRW D +++ +D+GVKK TG+SW V
Sbjct: 801 DLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHV 860
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
+ KVH F D LHP++D IY E+ ++K+ GFV VLHDV +E KE +L HS
Sbjct: 861 RGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHS 920
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EKLA+A+G++S P +R+MKNLRVC DCH AIK ISK V R II+RD RFHHF G
Sbjct: 921 EKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGY 980
Query: 772 CSCGDYW 778
CSC DYW
Sbjct: 981 CSCKDYW 987
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 153/642 (23%), Positives = 268/642 (41%), Gaps = 137/642 (21%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ + ++G A VF MP R +VS+ MI G +G+ A + F M
Sbjct: 284 WNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGF 343
Query: 124 VSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYADAARR 175
++ + + ++ R + + K + S N++L Y + G A+ AR
Sbjct: 344 APSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARA 403
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+F+RM ++ SWN +++ Y GR+E A +FE+ +VSWN+++ G+ + G A
Sbjct: 404 VFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMA 463
Query: 236 KWIFDR-----------------------------------------MPVRDEVSWNTMI 254
F R MP ++ N +I
Sbjct: 464 LKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQI-MNALI 522
Query: 255 TGYAQNNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
+ YA++ + A+R+ ++A V D V ++TA++ GYV+ G +AR IFD M ++ ++W
Sbjct: 523 STYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAW 582
Query: 313 NAMIAGYVQTKRMDMARELFEAMT-------------------------------CKNVA 341
AMI GY Q + D A ELF +M CK +
Sbjct: 583 TAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIR 642
Query: 342 SW--------NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLR 392
S N +IT YA+SG + AR +FD++ + + I+W ++I AQ G E ++
Sbjct: 643 SLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVV 702
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF EM R G + + + VLS CA+ ++ GK+ + Q M
Sbjct: 703 LFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQ------------------MQN 744
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+ G V + H + M+ +AR G +A + M + PD +
Sbjct: 745 EHGIVPQMSH------------YACMVDLHARAGLLTEAHEFIQRMP---VAPDTVVWGS 789
Query: 513 ILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ---NLM 566
+L+AC + L E S++ NS Y+ + ++ GR ++A L
Sbjct: 790 LLAACRVRKNADLAELAAGKLLSIDPH-----NSGAYSALANVYSACGRWNDAARIWKLR 844
Query: 567 KNMPFEPDAA-TWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
K+ + + +W + G ++G ++ + I+ E
Sbjct: 845 KDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAE 886
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 230/505 (45%), Gaps = 77/505 (15%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ WNV ++ + G + A+ +F +M RS VS+N +I+GY NG A + F +M
Sbjct: 413 VSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRM-- 470
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQN 167
L + ++ + LSA NL + + + S+ N ++S YA++
Sbjct: 471 --LSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKS 528
Query: 168 GYADAARRIFDRML--EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
G + ARRI D+ + + N IS+ LL YV+ G ++A +F+ N +V++W +++ G
Sbjct: 529 GSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVG 588
Query: 226 FVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYL-------AEAQRLFEEAP 274
+ + + +A +F M P + + +++ A YL +A R +E
Sbjct: 589 YHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQE-- 646
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFE 333
+ V A+++ Y ++G V AR +FD + K T++W +MI Q + A LFE
Sbjct: 647 -QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFE 705
Query: 334 AMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQS 384
M V ++ +++ A +G + + +++M I +A ++ +A++
Sbjct: 706 EMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARA 765
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFT----SVLSTCANLASLELGKQLHGQLVKVG-FEA 439
G L E + +R+ +P T S+L+ C + +L + G+L+ + +
Sbjct: 766 G-------LLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNS 818
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV-----ISWNTMIAGYARHGFGKDALM- 493
G + +AL +Y CG +A ++ DK V SW T + G H FG D ++
Sbjct: 819 GAY--SALANVYSACGRWNDAARIWKLRKDKGVKKETGFSW-THVRGKV-HVFGADDVLH 874
Query: 494 ------------LFESMKTVGIKPD 506
++E +K G PD
Sbjct: 875 PQRDSIYRKAAEMWEEIKKAGFVPD 899
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 50/291 (17%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D ++ + + +++ G A +F+ M R +++ AMI GY NGQ D A ++F
Sbjct: 544 ADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFR 603
Query: 117 QM----PQRDLVSWNVMISG--------YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
M P+ + + ++S Y + A R+L E + V N +++ Y
Sbjct: 604 SMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQE----QSVSVSNAIITVY 659
Query: 165 AQNGYADAARRIFDRML-EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
A++G ARR+FD++ K I+W ++ A Q+G E+A +LFE E+V
Sbjct: 660 ARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFE-----EMV------ 708
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-----APVKDV 278
R+G D +++ +++ A ++ + +R +E+ V +
Sbjct: 709 -------RVGVKP---------DHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQM 752
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMA 328
+ MV + + G + EA MP +TV W +++A K D+A
Sbjct: 753 SHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLA 803
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/626 (40%), Positives = 372/626 (59%), Gaps = 44/626 (7%)
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS----WNT 252
Q R++EA + +++L+ +K + L K + + + V N
Sbjct: 51 QQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNR 110
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
++ YA+ + L ++Q+LF+E P +D+ +W ++SGY + G + EA+ +FD MPE++ SW
Sbjct: 111 LLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSW 170
Query: 313 NAMIAGYVQTKRMDMARELFEAM-----------------------TCKNVAS------- 342
AMI+GYV+ R + A ELF M C +
Sbjct: 171 TAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIM 230
Query: 343 ----------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
W+ + Y + G I AR++FD+M D ++W A+I Y Q G ++
Sbjct: 231 RTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFD 290
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF ++ R G R N F+ VL+ CAN S ELGK++HG + +VGF+ F +AL+ MY
Sbjct: 291 LFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYS 350
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCG++ A F+E D+ SW ++IAGYA++G +A+ FE + G +PD IT VG
Sbjct: 351 KCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVG 410
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+LSAC+H GLV+KG +YF+S+ YG+ + HY C++DLL R+G+ DEA+N++ M +
Sbjct: 411 VLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMK 470
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
PD W +LLG CR++G +LA++AAE +FE+EPEN YV L+N+YA +G W +V+K+R
Sbjct: 471 PDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIR 530
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
M DRGV K G SW+ ++ VH F VGD HP+ I +L +L ++K++GFV T
Sbjct: 531 KTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTN 590
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLHDV +E+KE L YHSEKLAVA+GI+S P G PI+V KNLR C DCH AIK ISKI
Sbjct: 591 FVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKIT 650
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD+NRFH F G CSC DYW
Sbjct: 651 NRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 168/365 (46%), Gaps = 61/365 (16%)
Query: 77 CDSAL---HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
CDS + +F+ MP R S+N +ISGY G L A+ +FD+MP+RD SW MISGY
Sbjct: 118 CDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGY 177
Query: 134 VRNKSLSAARNLFEMMPK----------------------------------------RD 153
VR+ + A LF MM + D
Sbjct: 178 VRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSD 237
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----E 209
V W+ + Y + G + AR IFD+M++++ ++W ++ Y Q+GR +E LF
Sbjct: 238 EVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLR 297
Query: 210 SKANWEVVSWNSLMGGFVKQ--KRLGDAKWIFDRMPVRDEVSW--NTMITGYAQNNYLAE 265
S +++ ++ Q + LG + D S+ + ++ Y++ +
Sbjct: 298 SGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVS 357
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQ 321
A+R+F+E P D+F+WT++++GY QNG+ DEA F+ + + T +++ +++
Sbjct: 358 AERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAH 417
Query: 322 TKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWA 375
+D + F ++ + +I A+SG+ A N+ +M + D WA
Sbjct: 418 AGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWA 477
Query: 376 AIIAG 380
+++ G
Sbjct: 478 SLLGG 482
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 195/433 (45%), Gaps = 28/433 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y L ++++FD+MP+RDL SWN++ISGY + L A++LF+ MP+RD
Sbjct: 109 NRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNF 168
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM--------- 206
SW M+SGY ++ + A +F M + N + C+
Sbjct: 169 SWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGY 228
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ + + + V W++L + K + +A+ IFD+M RD V+W MI Y Q+ E
Sbjct: 229 IMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEG 288
Query: 267 QRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAG 318
LF + + FT++ +++ + + + M + + + +A++
Sbjct: 289 FDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHM 348
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISW 374
Y + M A +F+ ++ SW ++I GYAQ+G+ A F+ + Q D I++
Sbjct: 349 YSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITF 408
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
+++ A +G + L F +K +YG + ++ A + + + +
Sbjct: 409 VGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENI---IS 465
Query: 434 KVGFEAGCFVGNALL---VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
K+ + F+ +LL ++ + A A EI ++ ++ T+ YA G +
Sbjct: 466 KMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSE 525
Query: 491 ALMLFESMKTVGI 503
+ ++M G+
Sbjct: 526 VAKIRKTMDDRGV 538
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 130/316 (41%), Gaps = 59/316 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D W+ + + G + A H+F+ M R V++ AMI Y +G+ +F
Sbjct: 235 DSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFAD 294
Query: 118 MPQRDLVSWNVMISG---------------------------------------YVRNKS 138
+ + + SG Y + +
Sbjct: 295 LLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGN 354
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAA 194
+ +A +F+ P+ D+ SW ++++GYAQNG D A R F+ ++ + + I++ G+L+A
Sbjct: 355 MVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSA 414
Query: 195 YVQNGRIEEACMLFES-KANWEVV----SWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G +++ F S K + + + ++ + + +A+ I +M ++ D+
Sbjct: 415 CAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKF 474
Query: 249 SWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
W +++ G + L AQR LFE P ++ T+ + + Y G E I M
Sbjct: 475 LWASLLGGCRIHGNLKLAQRAAEALFEIEP-ENPATYVTLANIYATAGMWSEVAKIRKTM 533
Query: 305 PEKNTV-----SWNAM 315
++ V SW A+
Sbjct: 534 DDRGVVKKPGLSWIAI 549
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 286/769 (37%), Positives = 422/769 (54%), Gaps = 79/769 (10%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ S + + N +I Y + + AR +FD++P+ D+V+ M+S Y ++
Sbjct: 21 HILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKL 80
Query: 142 ARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY 195
A LF P RD VS+N M++ ++ + AA ++F +M + +++ +L A
Sbjct: 81 AHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGAL 140
Query: 196 VQNGRIEEACMLFESKANWEVVSW---------NSLMGGFVKQKR---------LGDAKW 237
E C + + EV W N+LM +V + A+
Sbjct: 141 SLIADEETHC----QQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARK 196
Query: 238 IFDRMPV--RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
+FD P RDE +W T+I GY +N+ L A+ L E W AM+SGYV G +
Sbjct: 197 LFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYE 256
Query: 296 EARMIFDAMPEKNTVSW------------------------------------------- 312
EA FD + +++
Sbjct: 257 EA---FDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVL 313
Query: 313 ---NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
NA+I Y + ++ AR +F+ M K++ SWN +++G + I A ++F MP
Sbjct: 314 SVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVR 373
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
++W +I+G AQ+G+ E+ L+LF +MK G + +++C+ L SL+ G+QLH
Sbjct: 374 SLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLH 433
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
Q++++G ++ VGNAL+ MY +CG VE A F + D +SWN MIA A+HG G
Sbjct: 434 SQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGV 493
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
A+ L+E M I PD IT + ILSACSH GLV++G YF +M YG+ P HY+ +
Sbjct: 494 QAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRL 553
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
+DLL RAG EA+N+ ++MPFEP A W ALL C ++G EL +AA+ + E+ P+
Sbjct: 554 IDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQD 613
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
G Y+ LSN+YAA G+W +V++VR MR+RGVKK G SW+EV+N VH F V D +HPE
Sbjct: 614 GTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVH 673
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
+Y YLE+L ++++ G+V TK VLHD+ E+KE+ L HSEKLAV YGI+ +P G I
Sbjct: 674 AVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATI 733
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RV KNLR+C DCHNA K+ISK+V R II+RD RFHHF G CSC +YW
Sbjct: 734 RVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 189/452 (41%), Gaps = 116/452 (25%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
P G D W I ++RN +A + M +V++NAMISGY+ G + A
Sbjct: 202 PPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEA--- 258
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARN--LFEMMPK------RDVVSW--------- 157
FD + R + S + + Y +SAA N LF + + R VV
Sbjct: 259 FDLL--RRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVN 316
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
N +++ Y + G ARR+FD+M K+ +SWN +L+ V RIEEA
Sbjct: 317 NALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEA------------- 363
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK- 276
NS IF MPVR ++W MI+G AQN + E +LF + ++
Sbjct: 364 --NS----------------IFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEG 405
Query: 277 --------------------------------------DVFTWTAMVSGYVQNGKVDEAR 298
+ A+++ Y + G V+ A
Sbjct: 406 LEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAAD 465
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSG 354
+F MP ++VSWNAMIA Q A +L+E M +++ ++ T+++ + +G
Sbjct: 466 TVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAG 525
Query: 355 EITHARNLFDRM-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
+ R+ FD M P+ D ++ +I ++G +F E K E +
Sbjct: 526 LVKEGRHYFDTMRVCYGITPEED--HYSRLIDLLCRAG-------MFSEAKNVTESMPFE 576
Query: 408 P----FTSVLSTCANLASLELGKQLHGQLVKV 435
P + ++L+ C ++ELG Q +L+++
Sbjct: 577 PGAPIWEALLAGCWIHGNMELGIQAADRLLEL 608
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 152/345 (44%), Gaps = 57/345 (16%)
Query: 50 RNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLD 109
R +P+G + + N IT + R G A VF+ MP + VS+NA++SG + +++
Sbjct: 302 RTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIE 361
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
A +F +MP R L++W VMI SG AQNG+
Sbjct: 362 EANSIFREMPVRSLLTWTVMI-------------------------------SGLAQNGF 390
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNS 221
+ ++F++M LE + ++ G +A+ G ++ L + + + N+
Sbjct: 391 GEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNA 450
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF-- 279
L+ + + + A +F MP D VSWN MI AQ+ + +A +L+E+ +D+
Sbjct: 451 LITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPD 510
Query: 280 --TWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVSWNAMIAGYVQTKRMDMARE 330
T+ ++S G V E R FD M PE++ ++ +I + A+
Sbjct: 511 RITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEED--HYSRLIDLLCRAGMFSEAKN 568
Query: 331 LFEAMTCKNVAS-WNTMITGYAQSGE----ITHARNLFDRMPQHD 370
+ E+M + A W ++ G G I A L + MPQ D
Sbjct: 569 VTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQD 613
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A L+ + +H ++ GF+ + N L+ YCK ++ A + F++I D+++
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
TM++ Y+ G K A LF + + I+ D ++ +++A SH+ + F M R
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNA-TPMSIR-DTVSYNAMITAFSHSHDGHAALQLFVQMKR- 123
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
G +P+ ++ +LG + + + + + E WGAL
Sbjct: 124 LGFVPDPFTFS---SVLGALSLIADEETHCQQLHCE--VFKWGAL 163
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 289/774 (37%), Positives = 416/774 (53%), Gaps = 91/774 (11%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
N++I+ Y G + QVF +M RD+V+W+ MI+ Y N + A + FE M
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 150 PKR---------------------------------DVVSWNTMLSGYAQNGYADAARRI 176
P R DV +++ Y++ G A I
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN----------------------- 213
F +M E+N +SW ++ A Q+ ++ EA L+E
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 214 ----------------WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+VV N+L+ + K + DA+ FDRM RD +SW+ MI GY
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356
Query: 258 AQNNY-----LAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMP--- 305
AQ+ Y L E +L E + VF T+ +++ +G +++ R I +
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVG 416
Query: 306 -EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
E + A+ Y + + A ++F M KNV +W +++T Y + G++T A +F
Sbjct: 417 FESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFS 476
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
M + +SW +IAGYAQSG L MK G + +R S+L C L++LE
Sbjct: 477 EMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALER 536
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GK +H + VK+G E+ V +L+ MY KCG V EA F++I ++D ++WN M+AGY +
Sbjct: 537 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQ 596
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HG G +A+ LF+ M + P++IT ++SAC GLV++G E F M D+ + P +
Sbjct: 597 HGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQ 656
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CMVDLLGRAGRL EA+ ++ MP EPD + W ALLGAC+ + +LAE AA I +
Sbjct: 657 HYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRL 716
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
EP NA +YV LSN+YA +GRW D +KVR M D+G+KK G S +E+ ++HTF D
Sbjct: 717 EPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCA 776
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
HPE D I+A LE L ++K+ G+ + VLHDV E +KE L +HSEKLA+AYG+L P
Sbjct: 777 HPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTP 836
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIR+MKNLRVC DCH A K ISKI R I+ RD NRFH+F G+CSCGD+W
Sbjct: 837 PGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 252/559 (45%), Gaps = 79/559 (14%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+ N +I+ Y + +++ +F M RDVV+W++M++ YA N + A F+RM
Sbjct: 112 DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLG 233
+E N I++ +L A +E+A ++ S +V +L+ + K +
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYV 289
A IF +M R+ VSW +I AQ+ L EA L+E+ + T+ ++++
Sbjct: 232 LACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCN 291
Query: 290 QNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
++ R I + E+ + V NA+I Y + + ARE F+ M+ ++V SW+
Sbjct: 292 TPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSA 351
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MI GYAQS GY ++ +L M+R G N
Sbjct: 352 MIAGYAQS--------------------------GYQDKESLDEVFQLLERMRREGVFPN 385
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH--- 462
+ F S+L C+ +LE G+Q+H ++ KVGFE+ + A+ MY KCGS+ EA
Sbjct: 386 KVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFS 445
Query: 463 ----------------------------AFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
F E+ ++V+SWN MIAGYA+ G L
Sbjct: 446 KMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFEL 505
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
SMK G +PD +T++ IL AC +E+G + ++ G+ ++ T ++ +
Sbjct: 506 LSSMKVEGFQPDRVTIISILEACGALSALERG-KLVHAEAVKLGLESDTVVATSLIGMYS 564
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YV 613
+ G + EA+ + + D W A+L YG+ + +A ++ M E +
Sbjct: 565 KCGEVTEARTVFDKIS-NRDTVAWNAMLAG---YGQHGIGPEAVDLFKRMLKERVPPNEI 620
Query: 614 LLSNLYAASGRWGDVSKVR 632
+ + +A GR G V + R
Sbjct: 621 TFTAVISACGRAGLVQEGR 639
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 183/396 (46%), Gaps = 47/396 (11%)
Query: 292 GKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMD----MARELFEAMTCKNVASW 343
G++ EA + + ++ N+ ++ +I + +R + + ++L E ++
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N++I Y++ G++ +F RM D ++W+++IA YA + + + F MK
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
NR F S+L C N + LE +++H + G E V AL+ MY KCG + A
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS----- 518
F+++ +++V+SW +I A+H +A L+E M GI P+ +T V +L++C+
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 519 ------HTGLVEKGTEY-------FYSMNRDYGVIPNSKH------------YTCMVDLL 553
H+ + E+G E +M I +++ ++ M+
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356
Query: 554 GRAG-----RLDEAQNLMKNMPFE---PDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
++G LDE L++ M E P+ T+ ++L AC ++G E + I ++
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVG 416
Query: 606 PE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
E + + + N+YA G + +V KM ++ V
Sbjct: 417 FESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNV 452
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 2/202 (0%)
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
++G +++++L +K+ G +N + + ++ CA L E GK +H QL ++G +
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+GN+L+ Y K G V F + +DV++W++MIA YA + A FE MK
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
I+P+ IT + IL AC++ ++EK E +++ + G+ + T ++ + + G + A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKARE-IHTVVKASGMETDVAVATALITMYSKCGEISLA 233
Query: 563 QNLMKNMPFEPDAATWGALLGA 584
+ + M E + +W A++ A
Sbjct: 234 CEIFQKMK-ERNVVSWTAIIQA 254
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/716 (38%), Positives = 427/716 (59%), Gaps = 30/716 (4%)
Query: 88 PRRSSVSYNAMISGYLLNGQLDPARQVFDQMP--QRDLVSWNVMISGYVRNKSLSAARNL 145
P R+ ++++ G+L A FD +P +RD V N M+S + R + A ++
Sbjct: 88 PTRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSV 147
Query: 146 FEMMP-----KRDVVSWNTMLSGYAQ--NGYADAARRIFDRMLEKNEISW----NGLLAA 194
F + + D S+ ++S Q N A ++ +L+ + N L+A
Sbjct: 148 FHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 207
Query: 195 YVQNGRIE---EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
Y++ E +A + + + + ++W +++ G+V++ + A+ +F+ + + +V WN
Sbjct: 208 YMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWN 267
Query: 252 TMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVS-----GYVQNGKVDEARMIF 301
MI+GY Q+ A+A LF E+ P+ D FT+T+++S G+ +GK ++I
Sbjct: 268 AMISGYVQSGMCADAFELFRRMVSEKVPL-DEFTFTSVLSACANAGFFVHGKSVHGQIIR 326
Query: 302 ---DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
+ +PE NA++ Y + ++ +A+ +F+ M K+V SWNT+++GY SG +
Sbjct: 327 LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDK 386
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A +F MP + +SW +++GY G SED+L+LF +M+ + + ++ C
Sbjct: 387 AVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGE 446
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
L +L+ G+QLH LV+ GFEA GNALL MY KCG+V +A F + + D +SWN M
Sbjct: 447 LGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAM 506
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I+ +HG G++AL LF+ M GI PD I+ + IL+AC+H GLV++G YF SM RD+G
Sbjct: 507 ISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFG 566
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P HY ++DLLGR+GR+ EA++L+K MPFEP + W A+L CR G E AA
Sbjct: 567 ISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAA 626
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ +F M P++ G Y+LLSN Y+A+GRW D ++VR MRDRGVKK G SW+EV +K+H F
Sbjct: 627 DQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVF 686
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
VGDT HPE +Y +LE + ++++ G+V TK VLHD+ EKE++L HSEKLAV +
Sbjct: 687 LVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGF 746
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
G+L +P G + V+KNLR+C DCH A+ +SK VGR I++RD RFHHF G CSC
Sbjct: 747 GLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 33/365 (9%)
Query: 65 NVAITTHMRNGCCDS------ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
N I +M+ CD+ A V + MP + +++ M+ GY+ G ++ AR VF+++
Sbjct: 202 NALIALYMK---CDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEV 258
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAAR 174
+ V WN MISGYV++ + A LF M D ++ ++LS A G+ +
Sbjct: 259 DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGK 318
Query: 175 RIFDRM--LEKNEISW------NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
+ ++ L+ N + N L+ Y + G+I A +F++ +VVSWN+++ G+
Sbjct: 319 SVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGY 378
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWT 282
+ L A +F MP ++++SW M++GY +A +LF + +DV +T+
Sbjct: 379 IDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYA 438
Query: 283 AMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
++ + G + R + + E + + NA++ Y + ++ AR +F M
Sbjct: 439 GAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNL 498
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLF 394
+ SWN MI+ Q G A LFD+M D IS+ I+ +G ++ F
Sbjct: 499 DSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYF 558
Query: 395 IEMKR 399
MKR
Sbjct: 559 ESMKR 563
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 187/377 (49%), Gaps = 33/377 (8%)
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
N +P + NA+++ Y G++ A+++FD M +D+VSWN ++SGY+ + L A
Sbjct: 330 NFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVE 389
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGR 200
+F++MP ++ +SW M+SGY G ++ A ++F++M ++ + ++ G +AA + G
Sbjct: 390 VFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGA 449
Query: 201 IEEACML--------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
++ L FE+ + + N+L+ + K + DA+ +F MP D VSWN
Sbjct: 450 LKHGRQLHAHLVQCGFEASNS----AGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNA 505
Query: 253 MITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
MI+ Q+ + EA LF+ E D ++ +++ G VDE F++M
Sbjct: 506 MISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF 565
Query: 309 TVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITH---- 358
+S + +I ++ R+ AR+L + M + S W +++G +G++
Sbjct: 566 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYA 625
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A LF +PQHD ++ + Y+ +G D+ R+ M+ G + + P S + +
Sbjct: 626 ADQLFRMIPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRG--VKKEPGCSWIEVGSK 682
Query: 419 LASLELGKQLHGQLVKV 435
+ +G H + +V
Sbjct: 683 IHVFLVGDTKHPEAQEV 699
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 55/294 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN ++ ++ +GC D A+ VF MP ++ +S+ M+SGY+ G + A ++F+QM
Sbjct: 367 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 426
Query: 120 QRDL---------------------------------------VSWNVMISGYVRNKSLS 140
D+ + N +++ Y + +++
Sbjct: 427 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 486
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AR +F +MP D VSWN M+S Q+G+ A +FD+M ++ + IS+ +L A
Sbjct: 487 DARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 546
Query: 197 QNGRIEEACMLFES-KANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-W 250
G ++E FES K ++ + + L+ + R+G+A+ + MP S W
Sbjct: 547 HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 606
Query: 251 NTMITGYAQNNYLA----EAQRLFEEAPVKDVFTWTAMVSGYVQNGK-VDEARM 299
+++G N + A +LF P D T+ + + Y G+ VD AR+
Sbjct: 607 EAILSGCRTNGDMEFGAYAADQLFRMIPQHD-GTYILLSNTYSAAGRWVDAARV 659
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/709 (37%), Positives = 416/709 (58%), Gaps = 66/709 (9%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N ++S Y + ++ AR +F+ MP+R++ SWNT+LS Y++ R+F M ++ +
Sbjct: 48 NNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMV 107
Query: 187 SWNGLLAAYVQNGRIEEAC-----MLFESKANWEVVSWNSLMGGFVKQK----------- 230
SWN L++AY G + ++ ML+ N ++ ++++ KQ
Sbjct: 108 SWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGH 167
Query: 231 --RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+ G ++F P+ D Y++ + A++ F+E P K+V + +++G
Sbjct: 168 VVKFGFQSYVFVGSPLVDM---------YSKTGLVFCARQAFDEMPEKNVVMYNTLIAGL 218
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWN 344
++ +++++R +F M EK+++SW AMIAG+ Q A +LF M +N+ ++
Sbjct: 219 MRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFG 278
Query: 345 TMITG-----------------------------------YAQSGEITHARNLFDRMPQH 369
+++T Y + I A +F +M
Sbjct: 279 SVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCK 338
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ +SW A++ GY Q+GYSE+++++F +M+ G + SV+S+CANLASLE G Q H
Sbjct: 339 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFH 398
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
+ + G + V NAL+ +Y KCGS+E+++ F E+ D +SW +++GYA+ G
Sbjct: 399 CRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKAN 458
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+ L LFESM G KPD +T +G+LSACS GLV+KG + F SM +++ +IP HYTCM
Sbjct: 459 ETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCM 518
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
+DL RAGRL+EA+ + MPF PDA W +LL +CR + E+ + AAE + ++EP N
Sbjct: 519 IDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNT 578
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
Y+LLS++YAA G+W +V+ +R MRD+G++K G SW++ +N+VH FS D +P D
Sbjct: 579 ASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSD 638
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
+IY+ LE+L +K+ Q+G+V VLHDV + EK ML +HSEKLA+A+G++ IP G PI
Sbjct: 639 QIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPI 698
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RV+KNLRVC DCHNA K+ISKI R I++RD RFH F G CSCGD+W
Sbjct: 699 RVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 239/468 (51%), Gaps = 48/468 (10%)
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C + ++ N E+ N+L+ + K R+ A+ +FD+MP R+ SWNT+++ Y++ L
Sbjct: 33 CHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLP 92
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGY----------------VQNGKVDEARMIFDAM---- 304
E +R+F P +D+ +W +++S Y + NG + R+ M
Sbjct: 93 EMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILA 152
Query: 305 PEKNTVSWNAMIAG-----------YVQTKRMDM---------ARELFEAMTCKNVASWN 344
++ V + G +V + +DM AR+ F+ M KNV +N
Sbjct: 153 SKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYN 212
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
T+I G + I +R LF M + D ISW A+IAG+ Q+G +++ LF EM+ +
Sbjct: 213 TLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEM 272
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
++ F SVL+ C + +L+ GKQ+H +++ ++ FVG+AL+ MYCKC S++ A F
Sbjct: 273 DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVF 332
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
++ K+V+SW M+ GY ++G+ ++A+ +F M+ GI+PDD T+ ++S+C++ +E
Sbjct: 333 RKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLE 392
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + F+ G+I +V L G+ G ++++ L M + D +W AL+
Sbjct: 393 EGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY-VDEVSWTALVSG 450
Query: 585 CRLYGKTELAEKAAEVIFE--MEPENAGMYVLLSNLYAASGRWGDVSK 630
+GK + E + +P+ +LS A R G V K
Sbjct: 451 YAQFGKANETLRLFESMLAHGFKPDKVTFIGVLS----ACSRAGLVQK 494
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 217/490 (44%), Gaps = 70/490 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY----------------L 103
++ WN ++++ + C VF++MP R VS+N++IS Y L
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 104 LNGQLDPARQVFDQM----PQRDLVSWNVMISGYV--------------------RNKSL 139
NG + R M ++ V + + G+V + +
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
AR F+ MP+++VV +NT+++G + + +R++F M EK+ ISW ++A + QNG
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253
Query: 200 RIEEACMLFESK--ANWEVVSWN-----SLMGGFVKQKRLGDAKWIFDRMPVRDEV-SWN 251
EA LF N E+ + + GG + + R +D + +
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGS 313
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
++ Y + + A+ +F + K+V +WTAM+ GY QNG +EA IF M + N +
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDM-QNNGIE 372
Query: 312 WNAMIAGYVQTKRMDMAR-ELFEAMTCKNVASW--------NTMITGYAQSGEITHARNL 362
+ G V + ++A E C+ + S N ++T Y + G I + L
Sbjct: 373 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRL 432
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F M D +SW A+++GYAQ G + ++LRLF M +G + ++ F VLS C+ +
Sbjct: 433 FSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLV 492
Query: 423 ELGKQLHGQLVK------VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISW 475
+ G Q+ ++K + C + ++ + G +EEA ++ D I W
Sbjct: 493 QKGNQIFESMIKEHRIIPIEDHYTCMID-----LFSRAGRLEEARKFINKMPFSPDAIGW 547
Query: 476 NTMIAGYARH 485
++++ H
Sbjct: 548 ASLLSSCRFH 557
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 12/227 (5%)
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C L K++H ++K F+ N L+ Y K + A F+++ +++ SW
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
NT+++ Y++ + +F +M T D ++ ++SA + G + + + + M
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPT----RDMVSWNSLISAYAGRGFLLQSVKAYNLMLY 134
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLD---EAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ N + M+ L + G + + + F+ L+ +Y KT
Sbjct: 135 NGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVD---MYSKTG 191
Query: 593 LAEKAAEVIFEMEPENAGMY-VLLSNLYAASGRWGDVSKVRLKMRDR 638
L A + EM +N MY L++ L S R D ++ M+++
Sbjct: 192 LVFCARQAFDEMPEKNVVMYNTLIAGLMRCS-RIEDSRQLFYDMQEK 237
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/688 (39%), Positives = 405/688 (58%), Gaps = 65/688 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
+I +N I+ + +NG +A +F+ MP+R+ VS+N+MI+GYL N ++ A ++FD+M
Sbjct: 45 NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMF 104
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFD 178
+RD+ SW +MI+ Y R L AR LF ++P K+D V N +++GYA+ A+++FD
Sbjct: 105 KRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFD 164
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN------------------ 220
ML KN +SWN +L+ Y +NG+++ FE+ VVSWN
Sbjct: 165 EMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMF 224
Query: 221 -------------SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+++ GF R+ +A+ +F+ MP ++ VSWN MI Y + N + +A
Sbjct: 225 FKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAY 284
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+LF E P KD +WTAM++GYV+ GK+ +AR I + MP KN + AMI GY+Q+ RMD
Sbjct: 285 KLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDE 344
Query: 328 ARE-------------------------------LFEAMTCKNVASWNTMITGYAQSGEI 356
A E LF+ M CK++ SWNTMI YAQ+G++
Sbjct: 345 ANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQM 404
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A +F+ M + + +SW ++I GY Q+G ++L FI MK+ GE+ +++ L
Sbjct: 405 DKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRAS 464
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
ANLA+L +G QLH +K GF FV NA+L MY K G V EA + F EI +KDV+SWN
Sbjct: 465 ANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWN 524
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
++IAGYA +G GK+A+ LFE M GI PD++T G+LSAC+H G V++G F SM
Sbjct: 525 SLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTET 584
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
Y + P S+HY C+++LLGR GRL+EA +++ M A WGALL ACR++ ELA+
Sbjct: 585 YSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKY 644
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
+AE + +EP+NA YVLLSN++A +GRW V +VR+ M++ +K G SW+E+ N++H
Sbjct: 645 SAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLH 704
Query: 657 TF--SVGDTLHPEKDRIYAYLEELEFKL 682
F L PE I + E+ L
Sbjct: 705 CFLSKAPPDLRPEICNILKTVRNTEWML 732
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 257/541 (47%), Gaps = 96/541 (17%)
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
V + N +S ++G + A +F +M E+N +++N +++AY +NGRI A LF+
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT------------------ 255
+VSWNS++ G++ + + DA +FDRM RD SW MIT
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134
Query: 256 --------------GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
GYA+ EA++LF+E VK+V +W +++SGY +NGK+ F
Sbjct: 135 PDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFF 194
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
+AM E+N VSWN M+ GYV +D A F+ + NV SW TM++G+A G +T ARN
Sbjct: 195 EAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARN 254
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK---------------RYG----- 401
LF+ MP + +SW A+I Y + +D+ +LF+EM R G
Sbjct: 255 LFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQA 314
Query: 402 -ERLNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGF---EAGCFVGNALLVMYCKCGS 456
E LN P+ ++ + A + L+ G+ + ++ C+ N+++ Y CG
Sbjct: 315 REILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCW--NSMITGYAHCGR 372
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES------------------- 497
+EA F+E+V KD++SWNTMIA YA+ G AL +F
Sbjct: 373 TDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQN 432
Query: 498 ------------MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
MK G KPD T+V L A ++ + G + + + G +
Sbjct: 433 GLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQ-LHHLTIKTGFGNDLFV 491
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
++ + ++GR+ EA+N+ + D +W +L+ L G K A +FE+
Sbjct: 492 KNAILTMYAKSGRVPEAENVFAEIK-NKDVVSWNSLIAGYALNG----CGKEAVELFEVM 546
Query: 606 P 606
P
Sbjct: 547 P 547
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 207/395 (52%), Gaps = 26/395 (6%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G+ ++ WN+ + ++ G DSA F +P + VS+ M+SG+ G++ AR +F+
Sbjct: 198 GERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFN 257
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+MP ++LVSWN MI YVR + A LF MP++D VSW M++GY + G AR I
Sbjct: 258 EMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREI 317
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
+ M KN + ++ Y+Q+GR++EA +F + + V WNS++ G+ R +A
Sbjct: 318 LNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEAL 377
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+F M +D VSWNTMI YAQ + +A +F E ++V +W ++++GYVQNG E
Sbjct: 378 RLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFE 437
Query: 297 ARMIFDAM------PEKNTV-----------SWNAMIAGYVQTKRMDMARELFEAMTCKN 339
A F M P++ T+ + N + + T + +LF
Sbjct: 438 ALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVK----- 492
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N ++T YA+SG + A N+F + D +SW ++IAGYA +G ++++ LF M
Sbjct: 493 ----NAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPL 548
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
G + FT +LS C + ++ G L + +
Sbjct: 549 RGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTE 583
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 26/375 (6%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
VFT +S ++G+++EA +F M E+N V++N+MI+ Y + R+ ARELF+ M
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N+ SWN+MI GY + + A LFDRM + D SW +I Y + G E + LF +
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ-LVKVGFEAGCFVGNALLVMYCKCGS 456
+ + R+ ++++ A K+L + LVK N++L Y K G
Sbjct: 135 PDKQDTVCRN---ALIAGYAKKRLFREAKKLFDEMLVK-----NVVSWNSILSGYTKNGK 186
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
++ FE + +++V+SWN M+ GY G A M F+ + T P+ ++ V +LS
Sbjct: 187 MQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPT----PNVVSWVTMLSG 242
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+H G + + F M N + M+ R ++D+A L MP E D+
Sbjct: 243 FAHYGRMTEARNLFNEMP-----TKNLVSWNAMIGAYVRENQIDDAYKLFMEMP-EKDSV 296
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV--RLK 634
+W A++ GK +A E++ M +N + N Y SGR + +++ ++
Sbjct: 297 SWTAMINGYVRVGKL---LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQIS 353
Query: 635 MRDRGV--KKVTGYS 647
+RD +TGY+
Sbjct: 354 VRDSVCWNSMITGYA 368
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/771 (35%), Positives = 432/771 (56%), Gaps = 87/771 (11%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+N + + Q+ ARQ+FD+MP R+ S N+M+SGYV++++L AR LFE M R+
Sbjct: 49 FNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNE 108
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES 210
VSW M+ GY+QN A ++ M ++ + I++ LL+ + ++E +
Sbjct: 109 VSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSH 168
Query: 211 KANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ ++ +NSL+ + K L A +F MP +D VS+N MITGY + + EA
Sbjct: 169 IIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEA 228
Query: 267 QRLF---------------------------------------EEAPVKDVFTWTAMVSG 287
+LF + + V D+F A++
Sbjct: 229 LKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDF 288
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------ 335
Y ++ +D A+ +FD MPE + VS+N +I GY + + + +LF+ +
Sbjct: 289 YSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPF 348
Query: 336 -TCKNVASW--------------------------NTMITGYAQSGEITHARNLFDRMPQ 368
T +VA+ N ++ YA+ + A +F +
Sbjct: 349 ATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAY 408
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ + W AII+ Y Q G+ E++L++F EM R +++ F S L ANLAS+ LGKQL
Sbjct: 409 RNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQL 468
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H ++++G + F G+ L+ MY CGS+++A F+E+ D++++ WN +I+ Y+++G
Sbjct: 469 HSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDA 528
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+ F M G+ PD ++ + +L+ACSH GLVEK YF SM + Y + P KHY
Sbjct: 529 EATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYAT 588
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP-E 607
M+D+L R+GR +EA+NL+ MPFEPD W ++L +CR++ +LA+KAA+ +F+M+
Sbjct: 589 MIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALR 648
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
+A YV +SN+YA +G+W + +KV+ MR+RGVKKVT YSW+E+ ++VH F+ D HP+
Sbjct: 649 DAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQ 708
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
++I + L + ++G+ T L +V EE K L+YHSE+LA+A+ +++ P G
Sbjct: 709 TEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGS 768
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PI +MKNLR C DCH AIK ISKIVGR I +RD++RFHHF GSCSCGDYW
Sbjct: 769 PIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 282/741 (38%), Positives = 426/741 (57%), Gaps = 61/741 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N+++ Y G AR +FD +P R +VSWN + S YV + A +LF M +
Sbjct: 49 NSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIR 108
Query: 155 ---VSWNTMLSGYAQNGYADA--ARRIFDRML----EKNEISWNGLLAAYVQNGRIEEAC 205
S ++M++ G D+ R+I ++ + + S N L+ Y + G +E+A
Sbjct: 109 PNEFSLSSMIN--VCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDAS 166
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA----QNN 261
+F+ A ++VSWN+++ G V + A + M + + N A
Sbjct: 167 SVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMN-KSGMCPNMFTLSSALKACAGM 225
Query: 262 YLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
L E R + +K D F ++ Y + +D+AR++F MPE++ ++WNA+I
Sbjct: 226 ALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVI 285
Query: 317 AGYVQTKRMDMARELFEAM--------------------------TCKNVASW------- 343
+G+ Q + + A LF M C+ + +
Sbjct: 286 SGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFE 345
Query: 344 ------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
N++I Y + G + A +F+ P D + + +++ YAQ G E++LRL++EM
Sbjct: 346 FDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEM 405
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+ G + + +S+L+ CA+L++ E GKQ+H ++K GF + F GN+L+ MY KCGS+
Sbjct: 406 QDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSI 465
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E+A AF I + ++SW+ MI G A+HG+GK+AL LF+ M VG+ P+ IT+V +L AC
Sbjct: 466 EDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCAC 525
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+H GLV + YF SM +G+ P +HY CM+DLLGRAG+L+ A L+ MPF+ +A
Sbjct: 526 NHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALV 585
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
WGALLGA R++ +L E+AAE++ +EPE +G +VLL+N+YA+ G W V++VR M+D
Sbjct: 586 WGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKD 645
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD 697
VKK G SWLEV++KV+TF VGD H IYA L+EL LK+ G+V ++ LHD
Sbjct: 646 GKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHD 705
Query: 698 VGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
V EKE +L +HSEKLAVA+G+++ P G PIRV KNLR+C DCH +K ISKIV R II
Sbjct: 706 VERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREII 765
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
+RD NRFHHF GSCSCG+YW
Sbjct: 766 VRDTNRFHHFREGSCSCGEYW 786
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 223/462 (48%), Gaps = 51/462 (11%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+ +E N L+ Y + G +A LF++ + VVSWN+L +V G+A +F
Sbjct: 41 FDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFH 100
Query: 241 RMPVR----DEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNG 292
M + +E S ++MI + ++ L + D F+ A+V Y + G
Sbjct: 101 DMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVG 160
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAMTCKNVASWNT--- 345
+++A +FD + + + VSWNA+IAG V + +++ RE+ ++ C N+ + ++
Sbjct: 161 ILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALK 220
Query: 346 --------------------------------MITGYAQSGEITHARNLFDRMPQHDCIS 373
+I Y++ + AR +F MP+ D I+
Sbjct: 221 ACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIA 280
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I+G++Q+ E++ LF M G N++ ++VL + A L + + +Q+H +
Sbjct: 281 WNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSL 340
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K GFE +V N+L+ Y KCG VE+A FEE D++ + +++ YA+ G G++AL
Sbjct: 341 KSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALR 400
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
L+ M+ GIKPD +L+AC+ E+G + + + +G + + +V++
Sbjct: 401 LYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK-FGFMSDIFAGNSLVNMY 459
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLG--ACRLYGKTEL 593
+ G +++A +P +W A++G A YGK L
Sbjct: 460 AKCGSIEDASCAFSRIPVR-GIVSWSAMIGGLAQHGYGKEAL 500
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 175/404 (43%), Gaps = 75/404 (18%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D F ++V Y + G +AR +FDA+P+++ VSWNA+ + YV + A LF M
Sbjct: 44 DEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMV 103
Query: 337 CKNVA---------------------------------------SWNTMITGYAQSGEIT 357
+ S N ++ YA+ G +
Sbjct: 104 LSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILE 163
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A ++FD + + D +SW AIIAG Y +L L EM + G N +S L CA
Sbjct: 164 DASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACA 223
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+A ELG+QLH L+K+ + F+G L+ MY KC S+++A F+ + ++D+I+WN
Sbjct: 224 GMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNA 283
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I+G++++ ++A LF M T GI + T+ +L +
Sbjct: 284 VISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKS--------------------- 322
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ +Y C + L FE D +L+ YGK E A
Sbjct: 323 -IAALQANYMC-----------RQIHALSLKSGFEFDNYVVNSLIDT---YGKCGHVEDA 367
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
V E + ++ L YA G+ + ++ L+M+DRG+K
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIK 411
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 186/383 (48%), Gaps = 61/383 (15%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV--------------RNK 137
+ S NA++ Y G L+ A VFD++ + D+VSWN +I+G V NK
Sbjct: 146 AFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNK 205
Query: 138 S--------LSAA-------------RNLFEMMPKRDVVSWNTMLSG----YAQNGYADA 172
S LS+A R L + K D+ S + + G Y++ D
Sbjct: 206 SGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDD 265
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN-SLMGGFVKQKR 231
AR +F M E++ I+WN +++ + QN EEA LF + E + +N + + +K
Sbjct: 266 ARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLF-PLMHTEGIGFNQTTLSTVLKSIA 324
Query: 232 LGDAKWIFDRMPVR--------DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
A ++ ++ D N++I Y + ++ +A R+FEE+P+ D+ +T+
Sbjct: 325 ALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTS 384
Query: 284 MVSGYVQNGKVDEARMIFDAMPEK----------NTVSWNAMIAGYVQTKRMDMARELFE 333
+V+ Y Q+G+ +EA ++ M ++ + ++ A ++ Y Q K++ + F
Sbjct: 385 LVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFG 444
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
M+ ++ + N+++ YA+ G I A F R+P +SW+A+I G AQ GY +++L+L
Sbjct: 445 FMS--DIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQL 502
Query: 394 FIEMKRYGERLNRSPFTSVLSTC 416
F +M + G N SVL C
Sbjct: 503 FKQMLKVGVPPNHITLVSVLCAC 525
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 20/287 (6%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M G + N F SVL C L LGKQ+HG +V GF++ FV N+L+++Y KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+A F+ I D+ V+SWN + + Y +A+ LF M GI+P++ ++ +++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 517 CSHTGL---VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
C TGL V+ + Y + Y ++ +VD+ + G L++A ++ + +P
Sbjct: 121 C--TGLEDSVQGRKIHGYLIKLGYD--SDAFSANALVDMYAKVGILEDASSVFDEIA-KP 175
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYAASG----RWGD 627
D +W A++ C L+ E +A E++ EM M+ L S L A +G G
Sbjct: 176 DIVSWNAIIAGCVLH---EYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGR 232
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS---VGDTLHPEKDRI 671
L D G G +++ +K ++ + L PE+D I
Sbjct: 233 QLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMI 279
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 192/457 (42%), Gaps = 71/457 (15%)
Query: 12 SSCILHQ-HTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITT 70
+ C+LH+ H +++ L+ + P+ TL L + + + G RQ + ++
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELG----RQLHSSLIK 240
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
M G DS L V +I Y +D AR VF MP+RD+++WN +I
Sbjct: 241 -MDMGS-DSFLGV-------------GLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVI 285
Query: 131 SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
SG+ +N+ A +LF +M + G+ Q + + I
Sbjct: 286 SGHSQNEEDEEAASLFPLMHTEGI--------GFNQTTLSTVLKSI-------------- 323
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
A +Q + K+ +E ++ NSL+ + K + DA +F+ P+ D V
Sbjct: 324 ---AALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLV 380
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAM------VSGYVQNGKVDEAR 298
+ +++T YAQ+ EA RL+ E + D F +++ +S Y Q +V
Sbjct: 381 LFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHI 440
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
+ F M + + N+++ Y + ++ A F + + + SW+ MI G AQ G
Sbjct: 441 LKFGFM--SDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKE 498
Query: 359 ARNLFDRM------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTS 411
A LF +M P H I+ +++ +G ++ F MK +G + +
Sbjct: 499 ALQLFKQMLKVGVPPNH--ITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYAC 556
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++ LE +L + K+ F+A V ALL
Sbjct: 557 MIDLLGRAGKLEAAMEL---VNKMPFQANALVWGALL 590
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 268/700 (38%), Positives = 413/700 (59%), Gaps = 17/700 (2%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y +G+L AR+VFD+MP +L + N ++S ++ + LF MP+RD V
Sbjct: 52 NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEI-------SWNGLLAAYVQNGRIEEA--CM 206
S+N +++G++ G + +++ +L + + S ++A+ + + + + C
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ + L+ + K + DA+ +F M + V +NT+ITG + + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQT 322
+ LF+ +D TWT MV+G QNG EA +F M + + ++ +++
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291
Query: 323 KRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
++ +++ +T NV + ++ Y++ I A +F RM + ISW A+I
Sbjct: 292 AALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMI 351
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
GY Q+ SE+++R F EM+ G + + SV+S+CANLASLE G Q H + G
Sbjct: 352 VGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 411
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
V NAL+ +Y KCGS+E+A+ F+E+ D +SW ++ GYA+ G K+ + LFE M
Sbjct: 412 RYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+KPD +T +G+LSACS GLVEKG +YF SM +D+G++P HYTCM+DL R+GR
Sbjct: 472 LANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGR 531
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
EA+ +K MP PDA W LL +CRL G E+ + AAE + E +P+N YVLL ++
Sbjct: 532 FKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSM 591
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
+AA G+W +V+ +R MRDR VKK G SW++ +NKVH FS D HP RIY LE L
Sbjct: 592 HAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWL 651
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K+ ++G+ VLHDV + +K HM+ +HSEKLA+A+G++ +P PIR++KNLRVC
Sbjct: 652 NSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVC 711
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCHNA K ISKI GR I++RD RFH FS G+CSCGD+W
Sbjct: 712 VDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 162/369 (43%), Gaps = 68/369 (18%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ F +AP F +++ Y ++G++ AR +FD MP+ N + NA+++ ++ +
Sbjct: 40 KTFLQAP--PTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPD 97
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
LF +M ++ S+N +ITG++ +G + L+ + + + +
Sbjct: 98 MERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV--------------- 142
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
R R ++++ + L+ LG +H Q++++GF A FVG+ L
Sbjct: 143 ---------------RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPL 187
Query: 448 LVMYCKCGSVEEAYHAFEE-------------------------------IVDKDVISWN 476
+ MY K G + +A F+E +VD+D I+W
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWT 247
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
TM+ G ++G +AL +F M+ G+ D T IL+AC +E+G + + R
Sbjct: 248 TMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRT 307
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+ N + +VD+ + + A+ + + M + +W A++ YG+ +E+
Sbjct: 308 W-YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVG---YGQNACSEE 362
Query: 597 AAEVIFEME 605
A EM+
Sbjct: 363 AVRAFSEMQ 371
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 41/347 (11%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ + + G A VF M ++ V YN +I+G L ++ A+ +F M RD ++W
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWT 247
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
M++G +N A ++F M V G Q + ++
Sbjct: 248 TMVTGLTQNGLQLEALDVFRRMRAEGV--------GIDQYTFGSI-------------LT 286
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
G LAA + +I + ++ +E V ++L+ + K + + A+ +F RM R
Sbjct: 287 ACGALAALEEGKQIHA----YITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARM-- 299
+ +SW MI GY QN EA R F E + D FT +++S ++E
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 300 ---IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
+ + TVS NA++ Y + ++ A LF+ M+ + SW ++TGYAQ G+
Sbjct: 403 CLALVSGLMRYITVS-NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA 461
Query: 357 THARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+LF++M + D +++ +++ +++G E F M++
Sbjct: 462 KETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK 508
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 155/359 (43%), Gaps = 33/359 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-----GQLDPAR 112
D D W +T +NG AL VF M R V + G +L L+ +
Sbjct: 240 DRDSITWTTMVTGLTQNGLQLEALDVFRRM-RAEGVGIDQYTFGSILTACGALAALEEGK 298
Query: 113 QVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+ + + ++ + ++ Y + +S+ A +F M R+++SW M+ GY QN
Sbjct: 299 QIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNA 358
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWN 220
++ A R F M ++ ++ + ++++ +EE C+ S + N
Sbjct: 359 CSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSN 418
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---- 276
+L+ + K + DA +FD M D+VSW ++TGYAQ E LFE+
Sbjct: 419 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKP 478
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMAREL 331
D T+ ++S + G V++ FD+M + + + + MI Y ++ R A E
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 332 FEAMT-CKNVASWNTMITGYAQSGEIT----HARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ M + W T+++ G + A NL + PQ+ S+ + + +A G
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPA-SYVLLCSMHAAKG 596
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 409 FTSVLSTCAN---LASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAF 464
+ ++LS+ A + + +H ++K +A F+ N LL Y K G + A F
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+E+ D ++ + N +++ A D LF SM + D ++ +++ S TG
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMP----ERDAVSYNALITGFSSTGSPA 127
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMV----DLLGRA-GRLDEAQNLMKNMPFEPDAATWG 579
+ + + ++ R+ V P + M+ L RA G Q L + F A
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVL--RLGFGAYAFVGS 185
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
L+ +Y K L A V EME + MY
Sbjct: 186 PLVD---MYAKMGLIRDARRVFQEMEAKTVVMY 215
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/688 (39%), Positives = 404/688 (58%), Gaps = 65/688 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
+I +N I+ + +NG +A +F+ MP+R+ VS+N+MI+GYL N ++ A ++FD+M
Sbjct: 45 NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMF 104
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFD 178
+RD+ SW +MI+ Y R L AR LF ++P K+D V N +++GYA+ A+++FD
Sbjct: 105 KRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFD 164
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN------------------ 220
ML KN +SWN +L+ Y +NG+++ FE+ VVSWN
Sbjct: 165 EMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMF 224
Query: 221 -------------SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+++ GF R+ +A+ +F+ MP ++ VSWN MI Y + N + +A
Sbjct: 225 FKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAY 284
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+LF E P KD +WTAM++GYV+ GK+ +AR I + MP KN + AMI GY+Q+ RMD
Sbjct: 285 KLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDE 344
Query: 328 ARE-------------------------------LFEAMTCKNVASWNTMITGYAQSGEI 356
A E LF+ M CK++ SWNTMI YAQ+G++
Sbjct: 345 ANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQM 404
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A +F+ M + + +SW ++I GY Q+G ++L FI MK+ GE+ +++ L
Sbjct: 405 DKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRAS 464
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
ANLA+L +G QLH +K GF FV NA+L MY K G V EA + F EI KDV+SWN
Sbjct: 465 ANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWN 524
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
++IAGYA +G GK+A+ LFE M GI PD++T G+LSAC+H G V++G F SM
Sbjct: 525 SLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTET 584
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
Y + P S+HY C+++LLGR GRL+EA +++ M A WGALL ACR++ ELA+
Sbjct: 585 YSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKY 644
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
+AE + +EP+NA YVLLSN++A +GRW V +VR+ M++ +K G SW+E+ N++H
Sbjct: 645 SAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLH 704
Query: 657 TF--SVGDTLHPEKDRIYAYLEELEFKL 682
F L PE I + E+ L
Sbjct: 705 CFLSKAPPDLRPEICNILKTVRNTEWML 732
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 261/544 (47%), Gaps = 102/544 (18%)
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
V + N +S ++G + A +F +M E+N +++N +++AY +NGRI A LF+
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT------------------ 255
+VSWNS++ G++ + + DA +FDRM RD SW MIT
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134
Query: 256 --------------GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
GYA+ EA++LF+E VK+V +W +++SGY +NGK+ F
Sbjct: 135 PDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFF 194
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
+AM E+N VSWN M+ GYV +D A F+ + NV SW TM++G+A G +T ARN
Sbjct: 195 EAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARN 254
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK---------------RYG----- 401
LF+ MP + +SW A+I Y + +D+ +LF+EM R G
Sbjct: 255 LFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQA 314
Query: 402 -ERLNRSPFTSVLSTCANL------ASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCK 453
E LN P+ ++ + A + ++ ++ Q+ V+ ++ C+ N+++ Y
Sbjct: 315 REILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVR---DSVCW--NSMITGYAH 369
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES---------------- 497
CG +EA F+E+V KD++SWNTMIA YA+ G AL +F
Sbjct: 370 CGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGY 429
Query: 498 ---------------MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
MK G KPD T+V L A ++ + G + + + G +
Sbjct: 430 VQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQ-LHHLTIKTGFGND 488
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
++ + ++GR+ EA+N+ + + D +W +L+ L G K A +F
Sbjct: 489 LFVKNAILTMYAKSGRVPEAENVFAEIKXK-DVVSWNSLIAGYALNG----CGKEAVELF 543
Query: 603 EMEP 606
E+ P
Sbjct: 544 EVMP 547
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 207/395 (52%), Gaps = 26/395 (6%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G+ ++ WN+ + ++ G DSA F +P + VS+ M+SG+ G++ AR +F+
Sbjct: 198 GERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFN 257
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+MP ++LVSWN MI YVR + A LF MP++D VSW M++GY + G AR I
Sbjct: 258 EMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREI 317
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
+ M KN + ++ Y+Q+GR++EA +F + + V WNS++ G+ R +A
Sbjct: 318 LNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEAL 377
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+F M +D VSWNTMI YAQ + +A +F E ++V +W ++++GYVQNG E
Sbjct: 378 RLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFE 437
Query: 297 ARMIFDAM------PEKNTV-----------SWNAMIAGYVQTKRMDMARELFEAMTCKN 339
A F M P++ T+ + N + + T + +LF
Sbjct: 438 ALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVK----- 492
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N ++T YA+SG + A N+F + D +SW ++IAGYA +G ++++ LF M
Sbjct: 493 ----NAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPL 548
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
G + FT +LS C + ++ G L + +
Sbjct: 549 RGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTE 583
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 26/375 (6%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
VFT +S ++G+++EA +F M E+N V++N+MI+ Y + R+ ARELF+ M
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N+ SWN+MI GY + + A LFDRM + D SW +I Y + G E + LF +
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ-LVKVGFEAGCFVGNALLVMYCKCGS 456
+ + R+ ++++ A K+L + LVK N++L Y K G
Sbjct: 135 PDKQDTVCRN---ALIAGYAKKRLFREAKKLFDEMLVK-----NVVSWNSILSGYTKNGK 186
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
++ FE + +++V+SWN M+ GY G A M F+ + T P+ ++ V +LS
Sbjct: 187 MQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPT----PNVVSWVTMLSG 242
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+H G + + F M N + M+ R ++D+A L MP E D+
Sbjct: 243 FAHYGRMTEARNLFNEMP-----TKNLVSWNAMIGAYVRENQIDDAYKLFMEMP-EKDSV 296
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV--RLK 634
+W A++ GK +A E++ M +N + N Y SGR + +++ ++
Sbjct: 297 SWTAMINGYVRVGKL---LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQIS 353
Query: 635 MRDRGV--KKVTGYS 647
+RD +TGY+
Sbjct: 354 VRDSVCWNSMITGYA 368
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/592 (43%), Positives = 363/592 (61%), Gaps = 5/592 (0%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK---RLGDAKWIFDRMPVRDEV 248
+AA V+ G + A F S ++N L+ G+ K RL DA+ +FD +P D V
Sbjct: 19 VAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTV 78
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
S+NT+++ + + A+R+F PVKDV +W MVSG +NG +EA +F MP +N
Sbjct: 79 SYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRN 138
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMP 367
VSWNAM+A + M A +LF K A W M++GY +G + A F MP
Sbjct: 139 AVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMP 198
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG-ERLNRSPFTSVLSTCANLASLELGK 426
+ +SW A++AGY ++ ++D+LR+F M + N S +SVL C+NL++L G+
Sbjct: 199 VRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGR 258
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H +K+ VG +LL MYCKCG + +A F+E+ KD+++WN MI+GYA+HG
Sbjct: 259 QVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHG 318
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
G A+ LFE MK G+ PD IT++ +L+AC HTGL + G + F +M Y + P HY
Sbjct: 319 GGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHY 378
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
+CMVDLL RAG L+ A N++ +MPFEP + +G LL ACR+Y E AE AA + E +P
Sbjct: 379 SCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDP 438
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+NAG YV L+N+YA + +W DVS+VR M+D V K GYSW+E++ H F D LHP
Sbjct: 439 QNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHP 498
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ I+ L+ L+ +K G+V LHDV + K ML HSEKLA+A+G++S G
Sbjct: 499 QLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPG 558
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+R+ KNLR+C DCHNA K ISKI R IILRD RFHHF GG CSCGDYW
Sbjct: 559 MTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 202/425 (47%), Gaps = 60/425 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG---QLDPARQVFDQMPQR 121
VA+ +R G A F S +++ +YN +++GY +L AR++FD +P
Sbjct: 16 TVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHP 75
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D VS+N ++S + + AR +F MP +DV SWNTM+SG ++NG ++ A +F M
Sbjct: 76 DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMP 135
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+N +SWN ++AA +G + A LF + + + W +++ G++ + A F
Sbjct: 136 VRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFG 195
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPV--------------------- 275
MPVR+ VSWN ++ GY +N+ +A R+F E++ V
Sbjct: 196 AMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALG 255
Query: 276 ---------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
++V T+++S Y + G +++A +FD M K+ V+WNAMI+GY
Sbjct: 256 FGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYA 315
Query: 321 QTKRMDMARELFEAMTCKNVA-SWNTM---ITGYAQSGEITHARNLFDRM-------PQH 369
Q A +LFE M + V W T+ +T +G F+ M PQ
Sbjct: 316 QHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQI 375
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D ++ ++ ++G E ++ + M + S + ++L+ C +LE +
Sbjct: 376 D--HYSCMVDLLCRAGLLERAVNMIHSMPF---EPHPSAYGTLLTACRVYKNLEFAEFAA 430
Query: 430 GQLVK 434
+L++
Sbjct: 431 RKLIE 435
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 162/334 (48%), Gaps = 23/334 (6%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P P D +N ++ H G D A VF++MP + S+N M+SG NG + A
Sbjct: 73 PHP----DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAA 128
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYAD 171
+F MP R+ VSWN M++ + + AA +LF P K D + W M+SGY G
Sbjct: 129 AMFRIMPVRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQ 188
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN-----SLMGGF 226
A F M +N +SWN ++A YV+N R ++A +F++ +V N S++ G
Sbjct: 189 KAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGC 248
Query: 227 VKQKRLGDAKWIFD---RMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
LG + + ++P+ V+ T +++ Y + L +A ++F+E KD+ W
Sbjct: 249 SNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWN 308
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTV-SWNAMIA---GYVQTKRMDMARELFEAM--- 335
AM+SGY Q+G +A +F+ M ++ V W ++A + T D + FE M
Sbjct: 309 AMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEA 368
Query: 336 --TCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ ++ M+ ++G + A N+ MP
Sbjct: 369 YKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMP 402
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 291/760 (38%), Positives = 429/760 (56%), Gaps = 93/760 (12%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYA 170
R++ + D V N +IS Y + AR +FE M KRD+VSW+ M+S +A N
Sbjct: 68 RKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSME 127
Query: 171 DAARRIFDRMLE----KNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNS 221
A F MLE NE + ++ A Y G I ++ +V
Sbjct: 128 WQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCE 187
Query: 222 LMGGFVK-QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VK 276
L+ FVK LG A +FD+MP R+ V+W MIT +AQ +A LF + V
Sbjct: 188 LIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP 247
Query: 277 DVFTWTAMVSGYVQ--------------------------------------NGKVDEAR 298
D FT+++++S + +G VD++R
Sbjct: 248 DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSR 307
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDM-ARELFEAM-----------------TCKNV 340
+F+ MPE N +SW A+I YVQ+ D A ELF M C N+
Sbjct: 308 KVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL 367
Query: 341 AS----------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ N++I+ YA+SG + AR FD + + + +S+ AI+
Sbjct: 368 SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV 427
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
GYA++ SE++ LF E+ G ++ F S+LS A++ ++ G+Q+HG+L+K G++
Sbjct: 428 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 487
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+ + NAL+ MY +CG++E A+ F E+ D++VISW +MI G+A+HGF AL +F M
Sbjct: 488 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 547
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G KP++IT V +LSACSH G++ +G ++F SM +++G++P +HY CMVDLLGR+G
Sbjct: 548 LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 607
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L EA + +MP DA W LLGACR++G TEL AAE+I E EP++ Y+LLSNL
Sbjct: 608 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNL 667
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
+A++G+W DV K+R M++R + K G SW+EV+N+VH F VG+T HP+ +IY L++L
Sbjct: 668 HASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQL 727
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K+K+ G++ T VLHD+ EE+KE L HSEK+AVA+G++S +PIR+ KNLRVC
Sbjct: 728 ASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVC 787
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH AIK+IS GR I++RD+NRFHH G CSC DYW
Sbjct: 788 GDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 160/307 (52%), Gaps = 16/307 (5%)
Query: 292 GKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMA----RELFEAMTCKNVASW 343
G++ A D M ++N +++ ++ ++ + + R+L ++ +
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 344 NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
NT+I+ Y++ G+ AR +F+ M + D +SW+A+++ +A + ++ F++M G
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF-EAGCFVGNALLVMYCK-CGSVEEA 460
N F +V+ C+N +G+ ++G +VK G+ EA VG L+ M+ K G + A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
Y F+++ ++++++W MI +A+ G +DA+ LF M+ G PD T +LSAC+
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA---GRLDEAQNLMKNMPFEPDAAT 577
GL+ G + + R G+ + +VD+ + G +D+++ + + MP E + +
Sbjct: 263 GLLALGKQLHSRVIR-LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMS 320
Query: 578 WGALLGA 584
W A++ A
Sbjct: 321 WTAIITA 327
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 172/392 (43%), Gaps = 95/392 (24%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKR------ 152
+G L A +VFD+MP+R+LV+W +MI+ + + A +LF M P R
Sbjct: 196 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 255
Query: 153 ---------------------------DVVSWNTMLSGYAQ---NGYADAARRIFDRMLE 182
DV +++ YA+ +G D +R++F++M E
Sbjct: 256 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 315
Query: 183 KNEISWNGLLAAYVQNGRIE-EACMLF--------------------------ESKANWE 215
N +SW ++ AYVQ+G + EA LF + +
Sbjct: 316 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 375
Query: 216 VVSW-------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
V S+ NSL+ + + R+ DA+ FD + ++ VS+N ++ GYA+N
Sbjct: 376 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 435
Query: 263 LAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNA 314
EA LF E + FT+ +++SG G + + I + + N NA
Sbjct: 436 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 495
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC--- 371
+I+ Y + ++ A ++F M +NV SW +MITG+A+ G T A +F +M +
Sbjct: 496 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 555
Query: 372 -ISWAAIIAGYAQSGYSEDSLRLFIEM-KRYG 401
I++ A+++ + G + + F M K +G
Sbjct: 556 EITYVAVLSACSHVGMISEGQKHFNSMYKEHG 587
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 163/353 (46%), Gaps = 49/353 (13%)
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP-ARQVFDQMPQRDLVSWNVMISG 132
+G D + VF MP + +S+ A+I+ Y+ +G+ D A ++F +M ISG
Sbjct: 300 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM-----------ISG 348
Query: 133 YVR------NKSLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQNGYADAA 173
++R + L A NL + V S+ N+++S YA++G + A
Sbjct: 349 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQ 229
R+ FD + EKN +S+N ++ Y +N + EEA +LF A+ + ++ SL+ G
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468
Query: 230 KRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+G + I R+ ++ N +I+ Y++ + A ++F E ++V +WT+M+
Sbjct: 469 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 528
Query: 286 SGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAM-----T 336
+G+ ++G A +F M E N +++ A+++ + ++ F +M
Sbjct: 529 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 588
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
+ + M+ +SG + A + MP D + W ++ G +E
Sbjct: 589 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE 641
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 141/328 (42%), Gaps = 58/328 (17%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCD-SALHVFNSM------PRRSSVSY------ 95
SR + + ++ W IT ++++G CD A+ +F M P S S
Sbjct: 306 SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 365
Query: 96 ---------------------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNV 128
N++IS Y +G+++ AR+ FD + +++LVS+N
Sbjct: 366 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 425
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRML--- 181
++ GY +N A LF + + ++ ++LSG A G +I R+L
Sbjct: 426 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 485
Query: 182 -EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+ N+ N L++ Y + G IE A +F + V+SW S++ GF K A +F
Sbjct: 486 YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH 545
Query: 241 RM----PVRDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQN 291
+M +E+++ +++ + ++E Q+ F E V + + MV ++
Sbjct: 546 KMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRS 605
Query: 292 GKVDEARMIFDAMP-EKNTVSWNAMIAG 318
G + EA ++MP + + W ++
Sbjct: 606 GLLVEAMEFINSMPLMADALVWRTLLGA 633
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 8/202 (3%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+ ++ +L +C + +LGK +H +L++ G E V N L+ +Y KCG E A FE
Sbjct: 45 TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 104
Query: 467 IVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ +K D++SW+ M++ +A + A+ F M +G P++ ++ ACS+
Sbjct: 105 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 164
Query: 526 GTEYFYSMNRDYGVIPNSKHYTC-MVDLLGR-AGRLDEAQNLMKNMPFEPDAATWGALLG 583
G E Y G + C ++D+ + +G L A + MP E + TW ++
Sbjct: 165 G-EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP-ERNLVTWTLMIT 222
Query: 584 ACRLYGKTELAEKAAEVIFEME 605
+ + A A ++ +ME
Sbjct: 223 R---FAQLGCARDAIDLFLDME 241
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 54/299 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N I+ + R+G + A F+ + ++ VSYNA++ GY N + + A +F+++ +
Sbjct: 393 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 452
Query: 124 --------------------------------------VSWNVMISGYVRNKSLSAARNL 145
N +IS Y R ++ AA +
Sbjct: 453 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 512
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRI 201
F M R+V+SW +M++G+A++G+A A +F +MLE NEI++ +L+A G I
Sbjct: 513 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 572
Query: 202 EEACMLFESKANWEVV-----SWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMIT 255
E F S + + ++ + L +A + MP+ D + W T++
Sbjct: 573 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 632
Query: 256 G--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N L A+ + E+ P D + + + + G+ + I +M E+N +
Sbjct: 633 ACRVHGNTELGRHAAEMILEQEP-DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 690
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/703 (39%), Positives = 404/703 (57%), Gaps = 53/703 (7%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
+ SY +MI+ +L N ++D AR VFD++ D+ + +MI+GY RN A LF MP
Sbjct: 11 TFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV 70
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
+DVVSWN+M+ G AR++FD M E++ +SW ++ ++Q G+IE A LF
Sbjct: 71 KDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM 130
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF- 270
++ +WNS++ G+ R+ D +F MP R+ +SW +MI G Q+ EA LF
Sbjct: 131 PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 190
Query: 271 -------EEAPVKDVFTW--------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
E P + +A+ G + V + FDA A+
Sbjct: 191 QMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISA------AL 244
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
I Y K+M+ + +F NV W ++TGY + +
Sbjct: 245 ITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK-------------------- 284
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
ED+L++F EM R G N+S FTS L++C L +L+ G+++H VK+
Sbjct: 285 -----------HEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKL 333
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G E FVGN+L+VMY +CG++ + F+ I K+++SWN++I G A+HG G AL F
Sbjct: 334 GLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFF 393
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
M ++PD+IT G+LSACSH+G+ +KG F + + HY CMVD+LGR
Sbjct: 394 NQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGR 453
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
+G+L+EA+ L++NMP + ++ W LL AC ++ K E+AE+AA+ I ++EP + YVLL
Sbjct: 454 SGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLL 513
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
SNLYA++ RW DVS++R +M+ RG+ K G SW+ ++ + F GD HP DRIY L
Sbjct: 514 SNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKL 573
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
E L KLK+ G+V + LHDV +E+KE ML YHSE+LA+ +G++S G I VMKNL
Sbjct: 574 EWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNL 633
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RVC DCH+AIK I+KIV R II+RD+ RFHHF G CSCGDYW
Sbjct: 634 RVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 190/410 (46%), Gaps = 49/410 (11%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
IT H+RN D A VF+ + Y MI+GY N + D A Q+F +MP +D+VSWN
Sbjct: 18 ITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWN 77
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
MI G L+ AR LF+ MP+R VVSW TM++G+ Q G + A +F +M ++ +
Sbjct: 78 SMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAA 137
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----- 242
WN ++ Y NGR+E+ LF+ V+SW S++GG + R +A +F +M
Sbjct: 138 WNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGV 197
Query: 243 ---PVR---------------------------------DEVSWNTMITGYAQNNYLAEA 266
P D +IT YA + ++
Sbjct: 198 EVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDS 257
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQT 322
R+F +V WTA+V+GY N K ++A +F M + N S+ + +
Sbjct: 258 LRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGL 317
Query: 323 KRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ +D RE+ A +V N++I Y + G + +F R+ + + +SW ++I
Sbjct: 318 EALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVI 377
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
G AQ G +L F +M R + FT +LS C++ + G+ L
Sbjct: 378 VGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCL 427
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 173/396 (43%), Gaps = 34/396 (8%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ W I ++ G + A +F MP R ++N+MI GY NG+++ ++F +MP
Sbjct: 104 VVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPC 163
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGYADAAR 174
R+++SW MI G ++ A LF M K ++ +++ A
Sbjct: 164 RNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGV 223
Query: 175 RIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
+I + K S++ ++A Y ++E++ +F K + VV W +L+ G+
Sbjct: 224 QIHAHVF-KLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLN 282
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA----EAQRLFEEAPVK-----DVFT 280
+ DA +F M +R+ V N A N+ + R A VK DVF
Sbjct: 283 CKHEDALKVFGEM-MREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFV 341
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK----RMDMARELFEAMT 336
+++ Y + G +++ +IF + +KN VSWN++I G Q + ++ +M
Sbjct: 342 GNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMV 401
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSL 391
+ ++ +++ + SG R LF ++ +A ++ +SG E++
Sbjct: 402 EPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAE 461
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
L M + N + +LS C + LE+ ++
Sbjct: 462 ELIRNMP---VKANSMVWLVLLSACTMHSKLEVAER 494
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 159/406 (39%), Gaps = 66/406 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
DI WN I + NG + L +F MP R+ +S+ +MI G +G+ + A +F QM
Sbjct: 134 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 193
Query: 119 -----PQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ ++ +I+ +L ++F++ D +++ YA
Sbjct: 194 GCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQ 253
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-------------------ES 210
+ + R+F L N + W L+ Y N + E+A +F S
Sbjct: 254 MEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNS 313
Query: 211 KANWEVVSW--------------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
E + W NSL+ + + L D IF R+ ++ VSW
Sbjct: 314 CCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSW 373
Query: 251 NTMITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
N++I G AQ+ LA ++ D T+T ++S +G + R +F E
Sbjct: 374 NSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSE 433
Query: 307 KNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEIT--- 357
+ + M+ ++ +++ A EL M K N W +++ ++
Sbjct: 434 NKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAE 493
Query: 358 -HARNLFDRMPQHDCISWAAIIAG-YAQSGYSEDSLRLFIEMKRYG 401
A+ + D P C S +++ YA + D R+ EMK+ G
Sbjct: 494 RAAKCIIDLEPH--CSSAYVLLSNLYASASRWSDVSRIRREMKQRG 537
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 280/760 (36%), Positives = 417/760 (54%), Gaps = 80/760 (10%)
Query: 92 SVSYNAMISGYLLN-------------GQLDPARQVFDQMP--QRDLVSWNVMISGYVRN 136
+V ++S YL N G AR++FD +P +R+ +WN ++S Y ++
Sbjct: 51 AVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSLLSMYAKS 110
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG-YADAARRIFDRMLEKNEISWNGLLAAY 195
L+ AR +F MP+RD VSW M+ G + G + DA + D + E GL +
Sbjct: 111 GRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGE-------GLAPSQ 163
Query: 196 VQNGRIEEACMLFESKA-NWEVVSW-------------NSLMGGFVKQKRLGDAKWIFDR 241
+ +C E++ +V S+ NS++ + K A+ +F+R
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
M VR E SWN M++ Y + A +FE + + +W A+++GY QNG D A F
Sbjct: 224 MKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFF 283
Query: 302 DAM-------PEKNTVS---------------------------------WNAMIAGYVQ 321
M P++ TV+ NA+I+ Y +
Sbjct: 284 SRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAK 343
Query: 322 TKRMDMARELFEAMTCK--NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ ++ AR + + NV S+ ++ GY + G+ AR +FD M D I+W A+I
Sbjct: 344 SGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIV 403
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
GY Q+G +++++ LF M R G N +VLS CA+LA L GKQ+H + ++ E
Sbjct: 404 GYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQ 463
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKDVISWNTMIAGYARHGFGKDALMLFESM 498
V NA++ +Y + GSV A F++I K+ ++W +MI A+HG G+ A++LFE M
Sbjct: 464 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEM 523
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
VG+KPD +T +G+ SAC+H G ++KG Y+ M ++G++P HY CMVDLL RAG
Sbjct: 524 LRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGL 583
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L EA ++ MP PD WG+LL ACR+ +LAE AAE + ++P+N+G Y L+N+
Sbjct: 584 LTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANV 643
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
Y+A GRW D +++ +D+ VKK TG+SW VQ+KVH F D LHP++D I E+
Sbjct: 644 YSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEM 703
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
++K+ GFV VLHDV +E KE +L HSEKLA+A+G++S P +R+MKNLRVC
Sbjct: 704 WEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVC 763
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH AIK ISK+V R II+RD RFHHF G CSC DYW
Sbjct: 764 NDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 148/599 (24%), Positives = 258/599 (43%), Gaps = 135/599 (22%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ + ++G A VF MP R +VS+ M+ G G+ A + F M L
Sbjct: 100 WNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGL 159
Query: 124 VSWNVMISGYVRNKSLSAARNL--------FEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
M++ + + + + AR + ++ V N++L Y + G A+ AR
Sbjct: 160 APSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARA 219
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD- 234
+F+RM ++E SWN +++ Y GR++ A +FE+ +VSWN+++ G+ Q L D
Sbjct: 220 VFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGY-NQNGLDDM 278
Query: 235 AKWIFDR-----------------------------------------MPVRDEVSWNTM 253
A F R MP ++ N +
Sbjct: 279 ALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQI-MNAL 337
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
I+ YA++ + A+R+ ++A V D V ++TA++ GYV+ G +AR +FD M ++ ++
Sbjct: 338 ISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIA 397
Query: 312 WNAMIAGYVQTKRMDMARELFEAMT-------------------------------CKNV 340
W AMI GY Q + D A ELF +M C+ +
Sbjct: 398 WTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAI 457
Query: 341 ASW--------NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSL 391
S N +IT YA+SG + AR +FD++ + + ++W ++I AQ G E ++
Sbjct: 458 RSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAI 517
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF EM R G + +R + V S C + ++ GK+ + Q++
Sbjct: 518 VLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLN----------------- 560
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
+ G V E H + M+ AR G +A E ++ + + PD +
Sbjct: 561 -EHGIVPEMSH------------YACMVDLLARAGLLTEA---HEFIQRMPVAPDTVVWG 604
Query: 512 GILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+L+AC + L E E S++ D NS Y+ + ++ GR ++A + K
Sbjct: 605 SLLAACRVRKNADLAELAAEKLLSIDPD-----NSGAYSALANVYSACGRWNDAARIWK 658
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 225/499 (45%), Gaps = 71/499 (14%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ + G D AL +F +M RS VS+NA+I+GY NG D A + F +M L
Sbjct: 232 WNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRM----L 287
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQNGYA 170
+ ++ + LSA NL + + + S+ N ++S YA++G
Sbjct: 288 TASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSV 347
Query: 171 DAARRIFDRML--EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ ARRI D+ + + N IS+ LL YV+ G ++A +F+ N +V++W +++ G+ +
Sbjct: 348 ETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQ 407
Query: 229 QKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQ----RLFEEAPVKDVFT 280
+ +A +F M P + + +++ A YL + R + V
Sbjct: 408 NGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSV 467
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
A+++ Y ++G V AR +FD + K TV+W +MI Q + A LFE M
Sbjct: 468 SNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVG 527
Query: 340 V----ASWNTMITGYAQSGEITHARNLFDRM-PQHDCIS----WAAIIAGYAQSGYSEDS 390
V ++ + + +G I + +++M +H + +A ++ A++G
Sbjct: 528 VKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAG----- 582
Query: 391 LRLFIEMKRYGERLNRSPFT----SVLSTCANLASLELGKQLHGQLVKVGFE-AGCFVGN 445
L E + +R+ +P T S+L+ C + +L + +L+ + + +G + +
Sbjct: 583 --LLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAY--S 638
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDV-----ISWNTMIAGYARHGFGKDALM------- 493
AL +Y CG +A ++ DK V SW + + H FG D ++
Sbjct: 639 ALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKV--HVFGADDVLHPQRDAI 696
Query: 494 ------LFESMKTVGIKPD 506
++E +K G PD
Sbjct: 697 CKKAAEMWEEIKKAGFVPD 715
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 157/377 (41%), Gaps = 84/377 (22%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV--------------------------- 93
I WN I + +NG D AL F+ M SS+
Sbjct: 260 IVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMH 319
Query: 94 SY-------------NAMISGYLLNGQLDPARQVFDQMPQRDL--VSWNVMISGYVRNKS 138
SY NA+IS Y +G ++ AR++ D+ DL +S+ ++ GYV+
Sbjct: 320 SYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGD 379
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLA- 193
AR +F++M RDV++W M+ GY QNG D A +F M+ E N + +L+
Sbjct: 380 TKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSA 439
Query: 194 ----AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE-V 248
AY+ G+ + C S V N+++ + + + A+ +FD++ R E V
Sbjct: 440 CASLAYLGYGK-QIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETV 498
Query: 249 SWNTMITGYAQNNYLAEAQRLFEE---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+W +MI AQ+ +A LFEE VK D T+ + S G +D+ + ++ M
Sbjct: 499 TWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQM 558
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
L E ++ + M+ A++G +T A
Sbjct: 559 --------------------------LNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQ 592
Query: 365 RMP-QHDCISWAAIIAG 380
RMP D + W +++A
Sbjct: 593 RMPVAPDTVVWGSLLAA 609
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 53/320 (16%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D ++ + + +++ G A VF+ M R +++ AMI GY NGQ D A ++F
Sbjct: 360 ADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFR 419
Query: 117 QM----PQRDLVSWNVMIS--------GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
M P+ + + ++S GY + A R+L E + V N +++ Y
Sbjct: 420 SMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQE----QSVSVSNAIITVY 475
Query: 165 AQNGYADAARRIFDRML-EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
A++G ARR+FD++ K ++W ++ A Q+G E+A +LFE
Sbjct: 476 ARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFE-------------- 521
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-----APVKDV 278
+ R+G D V++ + + ++ + +R +E+ V ++
Sbjct: 522 ----EMLRVGVKP---------DRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEM 568
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAR---ELFEA 334
+ MV + G + EA MP +TV W +++A K D+A E +
Sbjct: 569 SHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLS 628
Query: 335 MTCKNVASWNTMITGYAQSG 354
+ N +++ + Y+ G
Sbjct: 629 IDPDNSGAYSALANVYSACG 648
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 97/278 (34%), Gaps = 71/278 (25%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEA-------------------GC-------- 441
F +L + G+ +H VK G GC
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87
Query: 442 ----------FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
F N+LL MY K G + +A F ++ ++D +SW M+ G R G DA
Sbjct: 88 DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHT----------------GL-----VEKGTEYF 530
+ F M G+ P + +LS+C+ T GL V Y
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYM 207
Query: 531 YSMNRDYGV---------IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
Y D + + + MV L GR+D A ++ +NM E +W A+
Sbjct: 208 YGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENME-ERSIVSWNAI 266
Query: 582 LGACRLYGKTELAEKAAEVIF---EMEPENAGMYVLLS 616
+ G ++A K + MEP+ + +LS
Sbjct: 267 IAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLS 304
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/650 (40%), Positives = 388/650 (59%), Gaps = 47/650 (7%)
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
I ++ N N LL+ Y + G + +A +F+ + +VSW +++ FV + +A
Sbjct: 122 ILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEA 181
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSG 287
++ M + D+V++ +++ + L Q++ E + T++V
Sbjct: 182 YKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGM 241
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----- 342
Y + G + +A++IFD +PEKN V+W +IAGY Q ++D+A EL E M VA
Sbjct: 242 YAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITY 301
Query: 343 --------------------------------W--NTMITGYAQSGEITHARNLFDRMPQ 368
W N +IT Y + G + AR LF +P
Sbjct: 302 TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D ++W A++ GYAQ G+ ++++ LF M++ G + ++ FTS L++C++ A L+ GK +
Sbjct: 362 RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSI 421
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H QLV G+ ++ +AL+ MY KCGS+++A F ++ +++V++W MI G A+HG
Sbjct: 422 HQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRC 481
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
++AL FE MK GIKPD +T +LSAC+H GLVE+G ++F SM DYG+ P +HY+C
Sbjct: 482 REALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSC 541
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
VDLLGRAG L+EA+N++ MPF+P + WGALL ACR++ E E+AAE + +++P++
Sbjct: 542 FVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDD 601
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G YV LSN+YAA+GR+ D KVR M R V K G SW+EV KVH F V D HPE
Sbjct: 602 DGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEA 661
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
IYA L +L ++K+ G+V T+ VLHDV EE+K L HSE+LA+ YG++ P G P
Sbjct: 662 KEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTP 721
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IR++KNLRVC DCH A K ISK+VGR II RD +RFHHF G CSCGD+W
Sbjct: 722 IRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 190/389 (48%), Gaps = 59/389 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
N ++S Y G L AR+VFD + R++VSW MI +V A +E M K
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 152 RDVVSWNTMLSG-----------------------------------YAQNGYADAARRI 176
D V++ ++L+ YA+ G A+ I
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRL 232
FD++ EKN ++W L+A Y Q G+++ A L E EV +++ S++ G L
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314
Query: 233 GDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
K +I R+ N +IT Y + L EA++LF + P +DV TWTAMV+GY
Sbjct: 315 EHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGY 374
Query: 289 VQNGKVDEARMIFDAM------PEKNTVSWNAMIA----GYVQTKRMDMARELFEAMTCK 338
Q G DEA +F M P+K T + +A+ + ++Q + + ++L A
Sbjct: 375 AQLGFHDEAIDLFRRMQQQGIKPDKMTFT-SALTSCSSPAFLQEGK-SIHQQLVHAGYSL 432
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+V + +++ YA+ G + AR +F++M + + ++W A+I G AQ G ++L F +MK
Sbjct: 433 DVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMK 492
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ G + ++ FTSVLS C ++ +E G++
Sbjct: 493 KQGIKPDKVTFTSVLSACTHVGLVEEGRK 521
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 200/405 (49%), Gaps = 33/405 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
+++ Y G + A+ +FD++P++++V+W ++I+GY + + A L E M + +V
Sbjct: 236 TSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVA 295
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLEKN---EISW--NGLLAAYVQNGRIEEACM 206
+++ ++L G + +++ +++ EI W N L+ Y + G ++EA
Sbjct: 296 PNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREI-WVVNALITMYCKCGGLKEARK 354
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNY 262
LF + +VV+W +++ G+ + +A +F RM + D++++ + +T + +
Sbjct: 355 LFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAF 414
Query: 263 LAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
L E Q+L DV+ +A+VS Y + G +D+AR++F+ M E+N V+W AMI G
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITG 474
Query: 319 YVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS- 373
Q R A E FE M + + ++ ++++ G + R F M I
Sbjct: 475 CAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKP 534
Query: 374 ----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
++ + ++G+ E++ + + M + S + ++LS C + +E G++
Sbjct: 535 MVEHYSCFVDLLGRAGHLEEAENVILTMPF---QPGPSVWGALLSACRIHSDVERGERAA 591
Query: 430 GQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
++K+ + G +V AL +Y G E+A + + +DV+
Sbjct: 592 ENVLKLDPDDDGAYV--ALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 130/257 (50%), Gaps = 8/257 (3%)
Query: 355 EITHARNLFDRMPQH------DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
E+T D++P + D ++ + ++ + G +++L + M G R+
Sbjct: 39 ELTTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDV 98
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F +L CA L SLE G+++H ++K G + ++ N LL MY KCGS+ +A F+ I
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
D++++SW MI + +A +E+MK G KPD +T V +L+A ++ L++ G +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+ + G+ + T +V + + G + +AQ + +P E + TW L+
Sbjct: 219 VHMEIAK-AGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQ 276
Query: 589 GKTELAEKAAEVIFEME 605
G+ ++A + E + + E
Sbjct: 277 GQVDVALELLEKMQQAE 293
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 55/275 (20%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ---------------------- 120
+F+ +P ++ V++ +I+GY GQ+D A ++ ++M Q
Sbjct: 254 IFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLA 313
Query: 121 -----------------RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
R++ N +I+ Y + L AR LF +P RDVV+W M++G
Sbjct: 314 LEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTG 373
Query: 164 YAQNGYADAARRIFDRM----LEKNEISWNGLLA-----AYVQNGR-IEEACMLFESKAN 213
YAQ G+ D A +F RM ++ +++++ L A++Q G+ I + L + +
Sbjct: 374 YAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQ--QLVHAGYS 431
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
+V ++L+ + K + DA+ +F++M R+ V+W MITG AQ+ EA FE+
Sbjct: 432 LDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQM 491
Query: 274 PVK----DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+ D T+T+++S G V+E R F +M
Sbjct: 492 KKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSM 526
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + ++ + + G D A VFN M R+ V++ AMI+G +G+ A + F+QM
Sbjct: 433 DVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMK 492
Query: 120 QR----DLVSWNVMISGYVRNKSLSAARNLFEMM-----PKRDVVSWNTMLSGYAQNGYA 170
++ D V++ ++S + R F M K V ++ + + G+
Sbjct: 493 KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 552
Query: 171 DAARRIFDRM-LEKNEISWNGLLAA 194
+ A + M + W LL+A
Sbjct: 553 EEAENVILTMPFQPGPSVWGALLSA 577
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/760 (38%), Positives = 429/760 (56%), Gaps = 93/760 (12%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYA 170
R++ + D V N +IS Y + AR +FE M KRD+VSW+ M+S +A N
Sbjct: 50 RKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSME 109
Query: 171 DAARRIFDRMLE----KNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNS 221
A F MLE NE + ++ A Y G I ++ +V
Sbjct: 110 WQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCE 169
Query: 222 LMGGFVK-QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VK 276
L+ FVK LG A +FD+MP R+ V+W MIT +AQ +A LF + V
Sbjct: 170 LIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP 229
Query: 277 DVFTWTAMVSGYVQ--------------------------------------NGKVDEAR 298
D FT+++++S + +G VD++R
Sbjct: 230 DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSR 289
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDM-ARELFEAM-----------------TCKNV 340
+F+ MPE N +SW A+I YVQ+ D A ELF M C N+
Sbjct: 290 KVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL 349
Query: 341 AS----------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ N++I+ YA+SG + AR FD + + + +S+ AI+
Sbjct: 350 SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV 409
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
GYA++ SE++ LF E+ G ++ F S+LS A++ ++ G+Q+HG+L+K G++
Sbjct: 410 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 469
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+ + NAL+ MY +CG++E A+ F E+ D++VISW +MI G+A+HGF AL +F M
Sbjct: 470 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 529
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G KP++IT V +LSACSH G++ +G ++F SM +++G++P +HY CMVDLLGR+G
Sbjct: 530 LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 589
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L EA + +MP DA W LLGACR++G TEL AAE+I E EP++ Y+LLSNL
Sbjct: 590 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNL 649
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
+A++G+W DV K+R M++R + K G SW+EV+N+VH F VG+T HP+ +IY L++L
Sbjct: 650 HASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQL 709
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K+K+ G++ T VLHD+ EE+KE L HSEK+AVA+G++S +PIR+ KNLRVC
Sbjct: 710 ASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVC 769
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH AIK+IS GR I++RD+NRFHH G CSC DYW
Sbjct: 770 GDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 160/307 (52%), Gaps = 16/307 (5%)
Query: 292 GKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMA----RELFEAMTCKNVASW 343
G++ A D M ++N +++ ++ ++ + + R+L ++ +
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 344 NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
NT+I+ Y++ G+ AR +F+ M + D +SW+A+++ +A + ++ F++M G
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF-EAGCFVGNALLVMYCK-CGSVEEA 460
N F +V+ C+N +G+ ++G +VK G+ EA VG L+ M+ K G + A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
Y F+++ ++++++W MI +A+ G +DA+ LF M+ G PD T +LSAC+
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA---GRLDEAQNLMKNMPFEPDAAT 577
GL+ G + + R G+ + +VD+ + G +D+++ + + MP E + +
Sbjct: 245 GLLALGKQLHSRVIR-LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMS 302
Query: 578 WGALLGA 584
W A++ A
Sbjct: 303 WTAIITA 309
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 170/389 (43%), Gaps = 94/389 (24%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKR------ 152
+G L A +VFD+MP+R+LV+W +MI+ + + A +LF M P R
Sbjct: 178 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 237
Query: 153 ---------------------------DVVSWNTMLSGYAQ---NGYADAARRIFDRMLE 182
DV +++ YA+ +G D +R++F++M E
Sbjct: 238 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 297
Query: 183 KNEISWNGLLAAYVQNGRIE-EACMLF--------------------------ESKANWE 215
N +SW ++ AYVQ+G + EA LF + +
Sbjct: 298 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 357
Query: 216 VVSW-------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
V S+ NSL+ + + R+ DA+ FD + ++ VS+N ++ GYA+N
Sbjct: 358 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 417
Query: 263 LAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNA 314
EA LF E + FT+ +++SG G + + I + + N NA
Sbjct: 418 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 477
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC--- 371
+I+ Y + ++ A ++F M +NV SW +MITG+A+ G T A +F +M +
Sbjct: 478 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 537
Query: 372 -ISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
I++ A+++ + G + + F M +
Sbjct: 538 EITYVAVLSACSHVGMISEGQKHFNSMYK 566
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 163/353 (46%), Gaps = 49/353 (13%)
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP-ARQVFDQMPQRDLVSWNVMISG 132
+G D + VF MP + +S+ A+I+ Y+ +G+ D A ++F +M ISG
Sbjct: 282 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM-----------ISG 330
Query: 133 YVR------NKSLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQNGYADAA 173
++R + L A NL + V S+ N+++S YA++G + A
Sbjct: 331 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQ 229
R+ FD + EKN +S+N ++ Y +N + EEA +LF A+ + ++ SL+ G
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450
Query: 230 KRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+G + I R+ ++ N +I+ Y++ + A ++F E ++V +WT+M+
Sbjct: 451 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 510
Query: 286 SGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAM-----T 336
+G+ ++G A +F M E N +++ A+++ + ++ F +M
Sbjct: 511 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 570
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
+ + M+ +SG + A + MP D + W ++ G +E
Sbjct: 571 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE 623
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 141/328 (42%), Gaps = 58/328 (17%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCD-SALHVFNSM------PRRSSVSY------ 95
SR + + ++ W IT ++++G CD A+ +F M P S S
Sbjct: 288 SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 347
Query: 96 ---------------------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNV 128
N++IS Y +G+++ AR+ FD + +++LVS+N
Sbjct: 348 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 407
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRML--- 181
++ GY +N A LF + + ++ ++LSG A G +I R+L
Sbjct: 408 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 467
Query: 182 -EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+ N+ N L++ Y + G IE A +F + V+SW S++ GF K A +F
Sbjct: 468 YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFH 527
Query: 241 RM----PVRDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQN 291
+M +E+++ +++ + ++E Q+ F E V + + MV ++
Sbjct: 528 KMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRS 587
Query: 292 GKVDEARMIFDAMP-EKNTVSWNAMIAG 318
G + EA ++MP + + W ++
Sbjct: 588 GLLVEAMEFINSMPLMADALVWRTLLGA 615
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 8/202 (3%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+ ++ +L +C + +LGK +H +L++ G E V N L+ +Y KCG E A FE
Sbjct: 27 TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 86
Query: 467 IVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ +K D++SW+ M++ +A + A+ F M +G P++ ++ ACS+
Sbjct: 87 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 146
Query: 526 GTEYFYSMNRDYGVIPNSKHYTC-MVDLLGR-AGRLDEAQNLMKNMPFEPDAATWGALLG 583
G E Y G + C ++D+ + +G L A + MP E + TW ++
Sbjct: 147 G-EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP-ERNLVTWTLMIT 204
Query: 584 ACRLYGKTELAEKAAEVIFEME 605
+ + A A ++ +ME
Sbjct: 205 R---FAQLGCARDAIDLFLDME 223
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 54/299 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N I+ + R+G + A F+ + ++ VSYNA++ GY N + + A +F+++ +
Sbjct: 375 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 434
Query: 124 --------------------------------------VSWNVMISGYVRNKSLSAARNL 145
N +IS Y R ++ AA +
Sbjct: 435 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 494
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRI 201
F M R+V+SW +M++G+A++G+A A +F +MLE NEI++ +L+A G I
Sbjct: 495 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 554
Query: 202 EEACMLFESKANWEVV-----SWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMIT 255
E F S + + ++ + L +A + MP+ D + W T++
Sbjct: 555 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 614
Query: 256 G--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N L A+ + E+ P D + + + + G+ + I +M E+N +
Sbjct: 615 ACRVHGNTELGRHAAEMILEQEP-DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 672
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/651 (40%), Positives = 395/651 (60%), Gaps = 48/651 (7%)
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
I ++ N N LL+ Y + G + +A +F+S + +VSW +++ FV + +A
Sbjct: 73 ILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEA 132
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSG 287
++ M + D+V++ +++ + L Q+ + E + T++V
Sbjct: 133 FKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGM 192
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----- 342
Y + G + +AR+IFD +PEKN V+W +IAGY Q ++D+A EL E M VA
Sbjct: 193 YAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITF 252
Query: 343 --------------------------------W--NTMITGYAQSGEITHARNLFDRMPQ 368
W N++IT Y + G + AR LF +P
Sbjct: 253 ASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPH 312
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D ++W A++ GYAQ G+ ++++ LF M++ G + ++ FTSVL++C++ A L+ GK++
Sbjct: 313 RDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRI 372
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY-ARHGF 487
H QLV G+ ++ +AL+ MY KCGS+++A F ++ +++V++W +I G A+HG
Sbjct: 373 HQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGR 432
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
++AL F+ MK GIKPD +T +LSAC+H GLVE+G ++F SM DYG+ P +HY+
Sbjct: 433 CREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYS 492
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
C VDLLGRAG L+EA+N++ +MPF P + WGALL ACR++ E E+AAE + +++P+
Sbjct: 493 CFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPD 552
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
+ G YV LS++YAA+GR+ D KVR M R V K G SW+EV KVH F V D HPE
Sbjct: 553 DDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPE 612
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
++IY L +L ++K+ G+V T+ VLHDV EE+KE +L HSE+LA+ YG++ P G
Sbjct: 613 SEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGM 672
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PIR++KNLRVC DCH A K ISK+VGR II RD RFHHF+ G CSCGD+W
Sbjct: 673 PIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 201/406 (49%), Gaps = 34/406 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
+++ Y G + AR +FD++P++++V+W ++I+GY + + A L E M + +V
Sbjct: 187 TSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVA 246
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLEKN---EISW--NGLLAAYVQNGRIEEACM 206
+++ ++L G + +++ +++ E+ W N L+ Y + G +EEA
Sbjct: 247 PNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGREL-WVVNSLITMYCKCGGLEEARK 305
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNY 262
LF + +VV+W +++ G+ + +A +F RM + D++++ +++T + +
Sbjct: 306 LFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAF 365
Query: 263 LAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
L E +R+ ++ DV+ +A+VS Y + G +D+A ++F+ M E+N V+W A+I G
Sbjct: 366 LQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITG 425
Query: 319 -YVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
Q R A E F+ M + + ++ ++++ G + R F M I
Sbjct: 426 CCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIK 485
Query: 374 -----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
++ + ++G+ E++ + + M S + ++LS C + +E G++
Sbjct: 486 PMVEHYSCFVDLLGRAGHLEEAENVILSMPFIP---GPSVWGALLSACRVHSDVERGERA 542
Query: 429 HGQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
++K+ + G +V AL +Y G E+A + + +DV+
Sbjct: 543 AENVLKLDPDDDGAYV--ALSSIYAAAGRYEDAEKVRQVMEKRDVV 586
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 119/228 (52%), Gaps = 2/228 (0%)
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
++ ++G +++L + M G R+ F +L CA L SLE G+++H ++K G
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ ++ N LL MY KCGS+ +A F+ I D++++SW MI + +A +E+
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
MK G KPD +T V +L+A ++ L++ G + + + G+ + T +V + + G
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIV-EAGLELEPRVGTSLVGMYAKCG 197
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ +A+ + +P E + TW L+ G+ ++A + E + + E
Sbjct: 198 DISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE 244
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 135/269 (50%), Gaps = 27/269 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA-------- 111
++ W + I + + G D AL + +M +++ V+ N + +L G PA
Sbjct: 213 NVVTWTLLIAGYAQQGQVDVALELLETM-QQAEVAPNKITFASILQGCTTPAALEHGKKV 271
Query: 112 -RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
R + R+L N +I+ Y + L AR LF +P RDVV+W M++GYAQ G+
Sbjct: 272 HRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFH 331
Query: 171 DAARRIFDRM----LEKNEISWNGLLA-----AYVQNG-RIEEACMLFESKANWEVVSWN 220
D A +F RM ++ +++++ +L A++Q G RI + L + N +V +
Sbjct: 332 DEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ--QLVHAGYNLDVYLQS 389
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVK--- 276
+L+ + K + DA +F++M R+ V+W +ITG AQ+ EA F++ +
Sbjct: 390 ALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIK 449
Query: 277 -DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
D T+T+++S G V+E R F +M
Sbjct: 450 PDKVTFTSVLSACTHVGLVEEGRKHFRSM 478
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/717 (38%), Positives = 412/717 (57%), Gaps = 45/717 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y +G+L AR++FD MP +L + N ++S + L LF MP+RD V
Sbjct: 49 NHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAV 108
Query: 156 SWNTMLSGYA-----------------QNGYADAARRIFDRMLEKNEISWNGL-LAAYVQ 197
S+N +++G++ + D AR + + I+ +G+ +AA
Sbjct: 109 SYNALIAGFSGAGAPARAAGAYRALLREEAVVDGAR------VRPSRITMSGMVMAASAL 162
Query: 198 NGRI---EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
R + C + +W+ L+ + K +GDAK +FD M V++ V +NTMI
Sbjct: 163 GDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMI 222
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
TG + + EA+ +FE +D TWT MV+G QNG EA +F M + V +
Sbjct: 223 TGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEG-VGIDQ 281
Query: 315 MIAGYVQTKRMDMA-------------RELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
G + T +A R L++ N+ + ++ Y++ I A
Sbjct: 282 YTFGSILTACGALAASEEGKQIHAYTIRTLYDG----NIFVGSALVDMYSKCRSIRLAEA 337
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+F RM + ISW A+I GY Q+G E+++R+F EM+ G + N SV+S+CANLAS
Sbjct: 338 VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLAS 397
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
LE G Q H + G V +AL+ +Y KCGS+E+A+ F+E+ D +S+ +++G
Sbjct: 398 LEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSG 457
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA+ G K+ + LFE M G+KP+ +T +G+LSACS +GLVEKG YF+SM +D+G++
Sbjct: 458 YAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVL 517
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
HYTCM+DL R+GRL EA+ ++ MP PDA W LL ACRL G E+ + AAE +
Sbjct: 518 LDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENL 577
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
+ +P+N YVLL +++A+ G W +V+ +R MRDR VKK G SW++ +N+VH FS
Sbjct: 578 LKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSAD 637
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D HP IY L+ L K+ ++G+ VLHDV + EK HML HSEKLA+A+G++
Sbjct: 638 DQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLI 697
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+P PIRV+KNLRVC DCHNA K ISKI GR I++RD RFH FS G CSCGD+W
Sbjct: 698 FVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 183/399 (45%), Gaps = 59/399 (14%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
+ +++ ++ Y G + A++VFD+M +++V +N MI+G +R K + AR +FE M
Sbjct: 184 AFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVD 243
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML 207
RD ++W TM++G QNG A +F RM + ++ ++ +L A EE +
Sbjct: 244 RDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQI 303
Query: 208 ----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ + + ++L+ + K + + A+ +F RM ++ +SW MI GY QN
Sbjct: 304 HAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCG 363
Query: 264 AEAQRLFEEAPVKDV-------------------------FTWTAMVSG----------- 287
EA R+F E + F A+VSG
Sbjct: 364 EEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSAL 423
Query: 288 ---YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV---- 340
Y + G +++A +FD MP + VS+ A+++GY Q + +LFE M K V
Sbjct: 424 VTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNG 483
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQSGYSEDSLRLFI 395
++ +++ ++SG + + F M Q I + +I Y++SG +++
Sbjct: 484 VTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIR 543
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+M R + + + ++LS C +E+GK L+K
Sbjct: 544 QMPRCPDAIG---WATLLSACRLRGDMEIGKWAAENLLK 579
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 36/367 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN--GQL---DPAR 112
D D W +T +NG AL VF M R V + G +L G L + +
Sbjct: 243 DRDSITWTTMVTGLTQNGLQSEALDVFRRM-RAEGVGIDQYTFGSILTACGALAASEEGK 301
Query: 113 QVFDQMPQRDLVSWNVMISG-----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
Q+ R L N+ + Y + +S+ A +F M ++++SW M+ GY QN
Sbjct: 302 QI-HAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQN 360
Query: 168 GYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSW 219
G + A R+F M ++ N+ + ++++ +EE CM S +
Sbjct: 361 GCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVS 420
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV- 278
++L+ + K + DA +FD MP D+VS+ +++GYAQ E LFE+ +K V
Sbjct: 421 SALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVK 480
Query: 279 ---FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARE 330
T+ ++S ++G V++ F +M + + + + MI Y ++ R+ A E
Sbjct: 481 PNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEE 540
Query: 331 LFEAMT-CKNVASWNTMITGYAQSGEIT----HARNLFDRMPQHDCISWAAIIAGYAQSG 385
M C + W T+++ G++ A NL PQ+ S+ + + +A G
Sbjct: 541 FIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPA-SYVLLCSMHASKG 599
Query: 386 -YSEDSL 391
+SE +L
Sbjct: 600 EWSEVAL 606
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 280/722 (38%), Positives = 420/722 (58%), Gaps = 24/722 (3%)
Query: 80 ALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
A +F+ +P RR+ ++N+++S + +G+L AR VF +MP+RD VSW VM+ G R
Sbjct: 84 ARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAG 143
Query: 138 SLSAA-RNLFEMMPKRDVVSWNTM---LSGYAQNGYADAARRIFDRMLEKNEISW----N 189
A + L +M + T+ LS A R++ +++ S N
Sbjct: 144 RFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVAN 203
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
+L Y + G E A +FE V SWN+++ R+ A+ +F+ MP R VS
Sbjct: 204 SVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVS 263
Query: 250 WNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVS-----GYVQNGKVDEARM 299
WN MI GY QN A+A +LF E + D FT T+++S G V+ GK A +
Sbjct: 264 WNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYI 323
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--TCKNVASWNTMITGYAQSGEIT 357
+ M + V+ NA+I+ Y ++ ++ AR + + T NV S+ ++ GY + G++
Sbjct: 324 LRTEMAYNSQVT-NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR +F M D ++W A+I GY Q+G +++++ LF M G N +VLS CA
Sbjct: 383 SAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 442
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKDVISWN 476
+LA L+ GKQ+H + ++ E V NA++ MY + GS A F+++ K+ I+W
Sbjct: 443 SLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 502
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
+MI A+HG G++A+ LFE M G++PD IT VG+LSACSH G V +G Y+ + +
Sbjct: 503 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNE 562
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+ + P HY CMVDLL RAG EAQ ++ MP EPDA WG+LL ACR++ ELAE
Sbjct: 563 HQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAEL 622
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
AAE + ++P N+G Y ++N+Y+A GRW D +++ +++ V+K TG+SW +++K+H
Sbjct: 623 AAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIH 682
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
F D +HP++D +YA + ++K GFV + VLHDV +E KE +L HSEKLA+
Sbjct: 683 VFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAI 742
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+G++S P +RVMKNLRVC DCH AIK ISK+ R II+RD RFHHF G CSC D
Sbjct: 743 AFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKD 802
Query: 777 YW 778
YW
Sbjct: 803 YW 804
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 235/523 (44%), Gaps = 86/523 (16%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + G ++A VF MP RS S+NAM+S G++D A +F+ MP R +V
Sbjct: 203 NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 262
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARRIFDR 179
SWN MI+GY +N + A LF M D + ++LS A G +++
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 322
Query: 180 MLEKNEISW-----NGLLAAYVQNGRIEEACMLFES--KANWEVVSWNSLMGGFVKQKRL 232
+L + E+++ N L++ Y ++G +E A + + + + V+S+ +L+ G+VK +
Sbjct: 323 IL-RTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 381
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
A+ +F M RD V+W MI GY QN EA LF
Sbjct: 382 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLF---------------------- 419
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMIT 348
R + PE N+ + A+++ +D +++ ++ ++ + N +IT
Sbjct: 420 -----RSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIIT 474
Query: 349 GYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA+SG AR +FD++ + + I+W ++I AQ G E+++ LF EM R G +R
Sbjct: 475 MYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRI 534
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
+ VLS C++ + GK+ + Q+ E
Sbjct: 535 TYVGVLSACSHAGFVNEGKRYYDQIKN------------------------------EHQ 564
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVE 524
+ ++ + M+ AR G +A E ++ + ++PD I +LSAC + L E
Sbjct: 565 IAPEMSHYACMVDLLARAGLFSEAQ---EFIRRMPVEPDAIAWGSLLSACRVHKNAELAE 621
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
E S++ + NS Y+ + ++ GR +A + K
Sbjct: 622 LAAEKLLSIDPN-----NSGAYSAIANVYSACGRWSDAARIWK 659
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 27/253 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ + + +++ G +SA +F M R V++ AMI GY NG+ D A +F
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421
Query: 118 M----PQRDLVSWNVMIS--------GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
M P+ + + ++S Y + A R+L E + VS N +++ YA
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE---QSSSVS-NAIITMYA 477
Query: 166 QNGYADAARRIFDRML-EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWN 220
++G ARR+FD++ K I+W ++ A Q+G+ EEA LFE V +++
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 537
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPV 275
++ + + K +D++ +++ + M+ A+ +EAQ PV
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPV 597
Query: 276 K-DVFTWTAMVSG 287
+ D W +++S
Sbjct: 598 EPDAIAWGSLLSA 610
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/700 (38%), Positives = 411/700 (58%), Gaps = 17/700 (2%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y +G+L AR+VFD+MP +L + N ++S ++ + LF MP+RD V
Sbjct: 52 NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEI-------SWNGLLAAYVQNGRIEEA--CM 206
S+N +++G++ G + +++ +L + + S ++A+ + + + + C
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ + L+ + K + DA+ +F M + V +NT+ITG + + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQT 322
+ LF+ +D TWT MV+G QNG EA +F M + + ++ +++
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291
Query: 323 KRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ +++ +T NV + ++ Y++ I A +F RM + ISW A+I
Sbjct: 292 AASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMI 351
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
GY Q+ SE+++R F EM+ G + + SV+S+CANLASLE G Q H + G
Sbjct: 352 VGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 411
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
V NAL+ +Y KCGS+E+A+ F+E+ D +SW ++ GYA+ G K+ + LFE M
Sbjct: 412 RYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+KPD +T +G+LSACS GLVEKG +YF SM +D+ ++P HYTCM+DL R+GR
Sbjct: 472 LVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGR 531
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
EA+ +K MP PDA W LL +CRL G E+ + AAE + E +P+N YVLL ++
Sbjct: 532 FKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSM 591
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
+AA G+W +V+ +R MRDR VKK G SW++ +NKVH FS D HP RIY LE L
Sbjct: 592 HAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWL 651
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K+ ++G+ VLHDV + +K HM+ +HSEKLA+A+G++ +P PIR++KNLRVC
Sbjct: 652 NSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVC 711
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCHNA K ISKI GR I++RD RFH FS G+CSCGD+W
Sbjct: 712 VDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 161/369 (43%), Gaps = 68/369 (18%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ F +AP F +++ Y ++G++ AR +FD MP+ N + NA+++ ++ +
Sbjct: 40 KTFLQAP--PTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPD 97
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
LF +M ++ S+N +ITG++ +G + L+ + + + +
Sbjct: 98 MERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV--------------- 142
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
R R ++++ + L+ LG +H Q++++GF A FVG+ L
Sbjct: 143 ---------------RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPL 187
Query: 448 LVMYCKCGSVEEAYHAFEE-------------------------------IVDKDVISWN 476
+ MY K G + +A F+E +VD+D I+W
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWT 247
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
TM+ G ++G +AL +F M+ G+ D T IL+AC E+G + + R
Sbjct: 248 TMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRT 307
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+ N + +VD+ + + A+ + + M + +W A++ YG+ +E+
Sbjct: 308 W-YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVG---YGQNACSEE 362
Query: 597 AAEVIFEME 605
A EM+
Sbjct: 363 AVRAFSEMQ 371
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 154/349 (44%), Gaps = 45/349 (12%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ + + G A VF M ++ V YN +I+G L ++ A+ +F M RD ++W
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWT 247
Query: 128 VMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
M++G +N A ++F M D ++ ++L+ ++ ++I
Sbjct: 248 TMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIH------ 301
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
AY+ E+ V ++L+ + K + + A+ +F RM
Sbjct: 302 ----------AYITRTWYED-----------NVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARM 299
R+ +SW MI GY QN EA R F E + D FT +++S ++E
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 300 -----IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
+ + TVS NA++ Y + ++ A LF+ M+ + SW ++TGYAQ G
Sbjct: 401 FHCLALVSGLMRYITVS-NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 355 EITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+ +LF++M + D +++ +++ +++G E F M++
Sbjct: 460 KAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK 508
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 33/359 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN--GQL---DPAR 112
D D W +T +NG AL VF M R V + G +L G L + +
Sbjct: 240 DRDSITWTTMVTGLTQNGLQLEALDVFRRM-RAEGVGIDQYTFGSILTACGALAASEEGK 298
Query: 113 QVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+ + + ++ + ++ Y + +S+ A +F M R+++SW M+ GY QN
Sbjct: 299 QIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNA 358
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWN 220
++ A R F M ++ ++ + ++++ +EE C+ S + N
Sbjct: 359 CSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSN 418
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---- 276
+L+ + K + DA +FD M D+VSW ++TGYAQ E LFE+ V
Sbjct: 419 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKP 478
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMAREL 331
D T+ ++S + G V++ FD+M + + + + MI Y ++ R A E
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 332 FEAMT-CKNVASWNTMITGYAQSGEIT----HARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ M + W T+++ G + A NL + PQ+ S+ + + +A G
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPA-SYVLLCSMHAAKG 596
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 409 FTSVLSTCAN---LASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAF 464
+ ++LS+ A + + +H ++K +A F+ N LL Y K G + A F
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+E+ D ++ + N +++ A D LF SM + D ++ +++ S TG
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMP----ERDAVSYNALITGFSSTGSPA 127
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMV----DLLGRA-GRLDEAQNLMKNMPFEPDAATWG 579
+ + + ++ R+ V P + M+ L RA G Q L + F A
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVL--RLGFGAYAFVGS 185
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
L+ +Y K L A V EME + MY
Sbjct: 186 PLVD---MYAKMGLIRDARRVFQEMEAKTVVMY 215
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 280/722 (38%), Positives = 420/722 (58%), Gaps = 24/722 (3%)
Query: 80 ALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
A +F+ +P RR+ ++N+++S + +G+L AR VF +MP+RD VSW VM+ G R
Sbjct: 84 ARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAG 143
Query: 138 SLSAA-RNLFEMMPKRDVVSWNTM---LSGYAQNGYADAARRIFDRMLEKNEISW----N 189
A + L +M + T+ LS A R++ +++ S N
Sbjct: 144 RFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVAN 203
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
+L Y + G E A +FE V SWN+++ R+ A+ +F+ MP R VS
Sbjct: 204 SVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVS 263
Query: 250 WNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVS-----GYVQNGKVDEARM 299
WN MI GY QN A+A +LF E + D FT T+++S G V+ GK A +
Sbjct: 264 WNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYI 323
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--TCKNVASWNTMITGYAQSGEIT 357
+ M + V+ NA+I+ Y ++ ++ AR + + T NV S+ ++ GY + G++
Sbjct: 324 LRTEMAYNSQVT-NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR +F M D ++W A+I GY Q+G +++++ LF M G N +VLS CA
Sbjct: 383 SAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 442
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKDVISWN 476
+LA L+ GKQ+H + ++ E V NA++ MY + GS A F+++ K+ I+W
Sbjct: 443 SLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 502
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
+MI A+HG G++A+ LFE M G++PD IT VG+LSACSH G V +G Y+ + +
Sbjct: 503 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNE 562
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+ + P HY CMVDLL RAG EAQ ++ MP EPDA WG+LL ACR++ ELAE
Sbjct: 563 HQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAEL 622
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
AAE + ++P N+G Y ++N+Y+A GRW D +++ +++ V+K TG+SW +++K+H
Sbjct: 623 AAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIH 682
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
F D +HP++D +YA + ++K GFV + VLHDV +E KE +L HSEKLA+
Sbjct: 683 VFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAI 742
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+G++S P +RVMKNLRVC DCH AIK ISK+ R II+RD RFHHF G CSC D
Sbjct: 743 AFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKD 802
Query: 777 YW 778
YW
Sbjct: 803 YW 804
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 235/523 (44%), Gaps = 86/523 (16%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + G ++A VF MP RS S+NAM+S G++D A +F+ MP R +V
Sbjct: 203 NSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIV 262
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARRIFDR 179
SWN MI+GY +N + A LF M D + ++LS A G +++
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 322
Query: 180 MLEKNEISW-----NGLLAAYVQNGRIEEACMLFES--KANWEVVSWNSLMGGFVKQKRL 232
+L + E+++ N L++ Y ++G +E A + + + + V+S+ +L+ G+VK +
Sbjct: 323 IL-RTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 381
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
A+ +F M RD V+W MI GY QN EA LF
Sbjct: 382 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLF---------------------- 419
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMIT 348
R + PE N+ + A+++ +D +++ ++ ++ + N +IT
Sbjct: 420 -----RSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIIT 474
Query: 349 GYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA+SG AR +FD++ + + I+W ++I AQ G E+++ LF EM R G +R
Sbjct: 475 MYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRI 534
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
+ VLS C++ + GK+ + Q+ E
Sbjct: 535 TYVGVLSACSHAGFVNEGKRYYDQIKN------------------------------EHQ 564
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVE 524
+ ++ + M+ AR G +A E ++ + ++PD I +LSAC + L E
Sbjct: 565 IAPEMSHYACMVDLLARAGLFSEAQ---EFIRRMPVEPDAIAWGSLLSACRVHKNAELAE 621
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
E S++ + NS Y+ + ++ GR +A + K
Sbjct: 622 LAAEKLLSIDPN-----NSGAYSAIANVYSACGRWSDAARIWK 659
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 27/253 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ + + +++ G +SA +F M R V++ AMI GY NG+ D A +F
Sbjct: 362 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 421
Query: 118 M----PQRDLVSWNVMIS--------GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
M P+ + + ++S Y + A R+L E R N +++ YA
Sbjct: 422 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE----RSSSVSNAIITMYA 477
Query: 166 QNGYADAARRIFDRML-EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWN 220
++G ARR+FD++ K I+W ++ A Q+G+ EEA LFE V +++
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 537
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPV 275
++ + + K +D++ +++ + M+ A+ +EAQ PV
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPV 597
Query: 276 K-DVFTWTAMVSG 287
+ D W +++S
Sbjct: 598 EPDAIAWGSLLSA 610
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/718 (38%), Positives = 413/718 (57%), Gaps = 47/718 (6%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSG 163
LD + Q+FD++ + WN M+ Y+++ S A L+++M K +V ++ ++
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 164 YAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
A + I D +L + + N L+ Y G + +A LF+ + VSW
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
NS++ G+VK+ + +AK IFD+MP R+ V+ N+MI + + EA +LF E KD+
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMV 270
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS--------------------- 311
+W+A++SGY QNG +EA ++F M E VS
Sbjct: 271 SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 330
Query: 312 -----------WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
NA+I Y + + A++LF + SWN+MI+G + G + AR
Sbjct: 331 IRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKAR 390
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LFD MP+ D +SW+A+I+GYAQ ++L LF EM+ R + + SV+S C +LA
Sbjct: 391 ALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLA 450
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+L+ GK +H + K G + +G LL MY KCG VE A F + +K V SWN +I
Sbjct: 451 ALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALII 510
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G A +G + +L +F MK G+ P++IT +G+L AC H GLV++G +F SM +G+
Sbjct: 511 GLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIE 570
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
PN KHY CMVDLLGRAG L+EA+ L+++MP PD ATWGALLGAC+ +G TE+ E+
Sbjct: 571 PNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRK 630
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+ E++P++ G +VLLSN++A+ G W DV +VR M+ +GV K G S +E VH F
Sbjct: 631 LIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLA 690
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HP +++ L E+ +LK +G+ T V D+ EEEKE L HSEKLA+A+G+
Sbjct: 691 GDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGL 750
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
L+I PIR+MKNLR+C DCH A K ISK R I++RD +RFH+F G+CSC DYW
Sbjct: 751 LTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 224/457 (49%), Gaps = 30/457 (6%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ N I + G A +F+ P SVS+N++++GY+ G ++ A+
Sbjct: 169 KVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKL 228
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+FDQMPQR++V+ N MI + + A LF M ++D+VSW+ ++SGY QNG + A
Sbjct: 229 IFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEA 288
Query: 174 RRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEEACML---FESKANWEVVSWNS 221
+F M + +E+ +L+A V+ G++ ++ ES N + N+
Sbjct: 289 LVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQ----NA 344
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
L+ + + DA+ +F+ D++SWN+MI+G + + +A+ LF+ P KD+ +W
Sbjct: 345 LIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSW 404
Query: 282 TAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+A++SGY Q+ E +F M P++ + ++I+ +D + + +
Sbjct: 405 SAVISGYAQHDCFSETLALFHEMQLGQIRPDETILV--SVISACTHLAALDQGKWVHAYI 462
Query: 336 TCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
NV T++ Y + G + +A +F+ M + SW A+I G A +G E SL
Sbjct: 463 RKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSL 522
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVM 450
+F EMK G N F VL C ++ ++ G+ ++ K G E ++ +
Sbjct: 523 DMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDL 582
Query: 451 YCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+ G + EA E + + DV +W ++ +HG
Sbjct: 583 LGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 619
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/646 (38%), Positives = 393/646 (60%), Gaps = 8/646 (1%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
+++ N I+ MRNG + A +F+ MP+R++V+YNAMI GY NG +FD+MP
Sbjct: 40 NLKPLNSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMP 99
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+RD+ S+N MI+G ++ ++ A +F+ MP RDVVSWN+M+SGY NG A R+F
Sbjct: 100 ERDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSG 159
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M+ K+ +SWN ++A V G+++ A F+ ++ SW +++ G R+ +A+ +F
Sbjct: 160 MVLKDVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLF 219
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+ MPVRD +WNTMI GY +N + + LF++ P +D +W M++G V+N ++ +A
Sbjct: 220 EDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQDAMR 279
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+F MP+K SWN+++ G ++ + A E + SW +I GY ++GE+ A
Sbjct: 280 LFVEMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTA 339
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
++F+ MP D +W II G ++ + E+ L+ F++MK G + + FTSVL+ C++L
Sbjct: 340 VSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDL 399
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+L LG+Q+H Q+ K GF V NA++ +Y +CG+ A F + D ISWN++I
Sbjct: 400 PTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSHDFISWNSII 459
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
G A +G G +A+ +FE M+++ IKP+ IT VG+LSACSH GLV++G YF M +
Sbjct: 460 CGLAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKCCL 519
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLGACRLYGKTELAEK 596
P +HYTC+VDLLGR G +DEA + ++ M E A+ WGA+LGACR++ ++ E
Sbjct: 520 EPTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNMQVGEI 579
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
A E I E+EP N+G+Y++L+ +Y +SG+ D +V ++MR++GVKK SW+EV H
Sbjct: 580 AGERILEIEPHNSGVYIILAEMYLSSGKREDAERVWVRMREKGVKKQPACSWMEVNGSGH 639
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFK-----LKQDGFVYSTKLVLHD 697
F GD+ HP+ R+ L L + LK + + VL+D
Sbjct: 640 VFLSGDSSHPQFSRVCGVLGLLHMEMEIGILKSNAASFQEIQVLND 685
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 205/438 (46%), Gaps = 22/438 (5%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K G DI W I+ G A +F MP R ++N MI+GY+ NG ++
Sbjct: 189 KEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEV 248
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+F +MPQRD SWN MI+G VRN+ + A LF MP++ SWN+++ G +NG A
Sbjct: 249 LFQKMPQRDFRSWNEMINGLVRNQRIQDAMRLFVEMPQKCRRSWNSIVFGLIRNGLIKEA 308
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
++ + +SW L+ Y + G ++ A +FE + +WN ++ G +
Sbjct: 309 HAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGE 368
Query: 234 DAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW-----TAM 284
+ F +M P DE ++ +++T + L +++ + K F + AM
Sbjct: 369 EGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQV-TKTGFNYFVAVSNAM 427
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV---- 340
V+ Y + G + A ++F AM + +SWN++I G A E+FE M ++
Sbjct: 428 VTLYARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDIKPNH 487
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFI 395
++ +++ + +G + + FD M C+ + I+ + G ++++
Sbjct: 488 ITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFLR 547
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKC 454
+M+ G + S + +VL C ++++G+ +++++ +G ++ L MY
Sbjct: 548 QMEANGVEVPASVWGAVLGACRIHKNMQVGEIAGERILEIEPHNSGVYI--ILAEMYLSS 605
Query: 455 GSVEEAYHAFEEIVDKDV 472
G E+A + + +K V
Sbjct: 606 GKREDAERVWVRMREKGV 623
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/633 (40%), Positives = 382/633 (60%), Gaps = 7/633 (1%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P+ AGD + +WN I H R G +A VF+ M R+ ++N M+SG NG L AR
Sbjct: 30 PRHAGD--VGRWNSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADAR 87
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
VFD MP R+ VSW +++GY R ++ AR+LF+ MP R+VVSWN M+SGY +NG D
Sbjct: 88 GVFDAMPSRNSVSWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDR 147
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-WNSLMGGFVKQKR 231
AR +FD M ++++SW +++ Y++ R EA +F+ + S N+L+ G+
Sbjct: 148 ARELFDAMPARDDVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVCNALLSGYAGYGY 207
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
L DA+ +F RM D VSWN MITGY + + A+RLF+E P KD +WTA+V GY+QN
Sbjct: 208 LKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQN 267
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
G VD A +F MP+++ ++WN M+ G+V + R+D A LF M +++ SWNT++ GY
Sbjct: 268 GDVDAAWEVFQDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDLVSWNTILQGYI 327
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
Q G++ A F M + D SW +I+GY G +L L EM R G R +++ ++
Sbjct: 328 QQGDMDSATTWFRSMLEKDETSWNTVISGYKDEG----ALSLLSEMTRGGYRPDQATWSV 383
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
V+S CA+LA+L G+ +H +K GFE V ++L+ MY KCG + EA F+ IV +D
Sbjct: 384 VISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRD 443
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
++WN MIA YA HG +AL LF+ M PD T + +LSAC+H G + +G YF
Sbjct: 444 TVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEGCHYFR 503
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
SM +D+ ++P S HY+CMVDLLGR+G + +A N + +P W L +C +G
Sbjct: 504 SMQQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSNLQINAWETLFSSCNAHGDI 563
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
+L E A+ + + P + GMY LLSN+YAA G W + VR M+++G+KK TG SW+E+
Sbjct: 564 QLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWSSAATVRGLMKEQGLKKETGCSWIEL 623
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
+ V +FS D HP ++I ++ L +++
Sbjct: 624 KGDVVSFSSNDNAHPLIEQICQEVDNLSILIEE 656
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/582 (44%), Positives = 358/582 (61%), Gaps = 8/582 (1%)
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQK---RLGDAKWIFDRMPVRDEVSWNTMITGYA 258
EEA F S ++N L+ G+ K RL DA+ +FD +P D VS+NT+++ +
Sbjct: 27 EEA---FASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHF 83
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
+ A R+F PV+DV +W MVSG +NG ++EA +F AMP +N VSWNAM+A
Sbjct: 84 ACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAA 143
Query: 319 YVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ M A LF K A W M++GY +G + A F MP + +SW A+
Sbjct: 144 RASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAV 203
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYG-ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+AGY ++ + D+LR+F M + N S +SVL C+NL++L G+Q+H +K+
Sbjct: 204 VAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLP 263
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
VG +LL MYCKCG +++A F+E+ KD+++WN MI+GYA+HG G+ A+ LFE
Sbjct: 264 LGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFE 323
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
MK G+ PD IT++ +L+AC HTGL + G + F +M Y + P HY+CMVDLL RA
Sbjct: 324 KMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRA 383
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G L+ A N++ +MPFEP + +G LL ACR+Y E AE AA + E +P+NAG YV L+
Sbjct: 384 GLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLA 443
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+YA + RW DVS+VR M+D V K GYSW+E++ H F D LHP+ D I+ L+
Sbjct: 444 NIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLD 503
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
L +K G+ LHDV E K ML HSEKLA+A+G++S G +R+ KNLR
Sbjct: 504 RLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLR 563
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+C DCHNA K ISKI R IILRD RFHHF GG CSCGDYW
Sbjct: 564 ICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 197/423 (46%), Gaps = 77/423 (18%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQN---GYADAARRIFDRMLEKNEISWNGLLAAY 195
L+ A F + ++N +L+GYA+ G ARR+FD + + +S+N LL+ +
Sbjct: 23 LAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCH 82
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
G I+ A +F + +V SWN+++ G K + +A+ +F MP R+ VSWN M+
Sbjct: 83 FACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVA 142
Query: 256 GYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
A + + A+ LF AP K D WTAMVSGY+ G V +A F AMP +N VSWNA
Sbjct: 143 ARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNA 202
Query: 315 MIAGYVQTKRMDMARELFEAMT------------------CKNVAS---------W---- 343
++AGYV+ R A +F+ M C N+++ W
Sbjct: 203 VVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKL 262
Query: 344 ---------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
++++ Y + G++ A LFD M D ++W A+I+GYAQ G +++LF
Sbjct: 263 PLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLF 322
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+MK G + +VL+ C +H L G + CF
Sbjct: 323 EKMKDEGVVPDWITLLAVLTAC-----------IHTGLCDFGIQ--CF------------ 357
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
+++EAY+ ++ V ++ M+ R G + A+ + SM +P +L
Sbjct: 358 ETMQEAYN-----IEPQVDHYSCMVDLLCRAGLLERAVNMIHSMP---FEPHPSAYGTLL 409
Query: 515 SAC 517
+AC
Sbjct: 410 TAC 412
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 195/377 (51%), Gaps = 28/377 (7%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A +F+S+P +VSYN ++S + G +D A +VF MP RD+ SWN M+SG +N ++
Sbjct: 60 ARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAI 119
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE-ISWNGLLAAYVQN 198
A +F MP R+ VSWN M++ A +G AA +F EK + I W +++ Y+
Sbjct: 120 EEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDT 179
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV------SWNT 252
G +++A F + +VSWN+++ G+VK R GDA +F M V D + + ++
Sbjct: 180 GNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTM-VEDAIVQPNPSTLSS 238
Query: 253 MITGYAQNNYLAEAQRLFE---EAPV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
++ G + + L +++ + + P+ + + T+++S Y + G +D+A +FD M K+
Sbjct: 239 VLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKD 298
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA-SWNTM---ITGYAQSGEITHARNLFD 364
V+WNAMI+GY Q A +LFE M + V W T+ +T +G F+
Sbjct: 299 IVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFE 358
Query: 365 RM-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
M PQ D ++ ++ ++G E ++ + M + S + ++L+ C
Sbjct: 359 TMQEAYNIEPQVD--HYSCMVDLLCRAGLLERAVNMIHSMPF---EPHPSAYGTLLTACR 413
Query: 418 NLASLELGKQLHGQLVK 434
+LE + +L++
Sbjct: 414 VYKNLEFAEFAARKLIE 430
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 23/334 (6%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P P D +N ++ H G D A VF++MP R S+N M+SG NG ++ A
Sbjct: 68 PHP----DAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAE 123
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYAD 171
+F MP R+ VSWN M++ + + AA NLF P K D + W M+SGY G
Sbjct: 124 AMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQ 183
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN-----SLMGGF 226
A F M +N +SWN ++A YV+N R +A +F++ +V N S++ G
Sbjct: 184 KAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGC 243
Query: 227 VKQKRLGDAKWIFD---RMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
LG + + ++P+ ++ T +++ Y + L +A +LF+E KD+ W
Sbjct: 244 SNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWN 303
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTV-SWNAMIA---GYVQTKRMDMARELFEAM--- 335
AM+SGY Q+G +A +F+ M ++ V W ++A + T D + FE M
Sbjct: 304 AMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEA 363
Query: 336 --TCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
V ++ M+ ++G + A N+ MP
Sbjct: 364 YNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMP 397
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 460 AYHAFEEIVDKDVISWNTMIAGYAR-HGFGK--DALMLFESMKTVGIKPDDITMVGILSA 516
A AF K ++N ++AGYA+ G G+ DA LF+S+ PD ++ +LS
Sbjct: 26 AEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIP----HPDAVSYNTLLSC 81
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
G ++ F +M + + + MV L + G ++EA+ + + MP +A
Sbjct: 82 HFACGDIDGAWRVFSTMP-----VRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPAR-NAV 135
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+W A++ A G AAE +F PE +L + + + G+V K R
Sbjct: 136 SWNAMVAARASSGDM----GAAENLFRNAPEKTDA-ILWTAMVSGYMDTGNVQKAMEYFR 190
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
V+ + ++ + V V GD L
Sbjct: 191 AMPVRNLVSWNAV-VAGYVKNSRAGDAL 217
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/697 (39%), Positives = 400/697 (57%), Gaps = 53/697 (7%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
MI+ +L N ++D AR VFD++ D+ + +MI+GY RN A LF MP +DVVSW
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSW 60
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
N+M+ G AR++FD M E++ +SW ++ ++Q G+IE A LF ++
Sbjct: 61 NSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 120
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------- 270
+WNS++ G+ R+ D +F MP R+ +SW +MI G Q+ EA LF
Sbjct: 121 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 180
Query: 271 -EEAPVKDVFTW--------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
E P + +A+ G + V + FDA A+I Y
Sbjct: 181 VEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISA------ALITFYAN 234
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
K+M+ + +F NV W ++TGY + +
Sbjct: 235 CKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK-------------------------- 268
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
ED+L++F EM R G N+S FTS L++C L +L+ G+++H VK+G E
Sbjct: 269 -----HEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDV 323
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
FVGN+L+VMY +CG++ + F+ I K+++SWN++I G A+HG G AL F M
Sbjct: 324 FVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRS 383
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
++PD+IT G+LSACSH+G+ +KG F + + HY CMVD+LGR+G+L+E
Sbjct: 384 MVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEE 443
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A+ L++NMP + ++ W LL AC ++ K E+AE+AA+ I ++EP + YVLLSNLYA+
Sbjct: 444 AEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYAS 503
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
+ RW DVS++R +M+ RG+ K G SW+ ++ + F GD HP DRIY LE L K
Sbjct: 504 ASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGK 563
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
LK+ G+V + LHDV +E+KE ML YHSE+LA+ +G++S G I VMKNLRVC DC
Sbjct: 564 LKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDC 623
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H+AIK I+KIV R II+RD+ RFHHF G CSCGDYW
Sbjct: 624 HSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 190/410 (46%), Gaps = 49/410 (11%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
IT H+RN D A VF+ + Y MI+GY N + D A Q+F +MP +D+VSWN
Sbjct: 2 ITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWN 61
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
MI G L+ AR LF+ MP+R VVSW TM++G+ Q G + A +F +M ++ +
Sbjct: 62 SMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAA 121
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----- 242
WN ++ Y NGR+E+ LF+ V+SW S++GG + R +A +F +M
Sbjct: 122 WNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGV 181
Query: 243 ---PVR---------------------------------DEVSWNTMITGYAQNNYLAEA 266
P D +IT YA + ++
Sbjct: 182 EVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDS 241
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQT 322
R+F +V WTA+V+GY N K ++A +F M + N S+ + +
Sbjct: 242 LRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGL 301
Query: 323 KRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ +D RE+ A +V N++I Y + G + +F R+ + + +SW ++I
Sbjct: 302 EALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVI 361
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
G AQ G +L F +M R + FT +LS C++ + G+ L
Sbjct: 362 VGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCL 411
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 173/396 (43%), Gaps = 34/396 (8%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ W I ++ G + A +F MP R ++N+MI GY NG+++ ++F +MP
Sbjct: 88 VVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPC 147
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGYADAAR 174
R+++SW MI G ++ A LF M K ++ +++ A
Sbjct: 148 RNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGV 207
Query: 175 RIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
+I + K S++ ++A Y ++E++ +F K + VV W +L+ G+
Sbjct: 208 QIHAHVF-KLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLN 266
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA----EAQRLFEEAPVK-----DVFT 280
+ DA +F M +R+ V N A N+ + R A VK DVF
Sbjct: 267 CKHEDALKVFGEM-MREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFV 325
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK----RMDMARELFEAMT 336
+++ Y + G +++ +IF + +KN VSWN++I G Q + ++ +M
Sbjct: 326 GNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMV 385
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSL 391
+ ++ +++ + SG R LF ++ +A ++ +SG E++
Sbjct: 386 EPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAE 445
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
L M + N + +LS C + LE+ ++
Sbjct: 446 ELIRNMP---VKANSMVWLVLLSACTMHSKLEVAER 478
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 159/406 (39%), Gaps = 66/406 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
DI WN I + NG + L +F MP R+ +S+ +MI G +G+ + A +F QM
Sbjct: 118 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 177
Query: 119 -----PQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ ++ +I+ +L ++F++ D +++ YA
Sbjct: 178 GCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQ 237
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-------------------ES 210
+ + R+F L N + W L+ Y N + E+A +F S
Sbjct: 238 MEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNS 297
Query: 211 KANWEVVSW--------------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
E + W NSL+ + + L D IF R+ ++ VSW
Sbjct: 298 CCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSW 357
Query: 251 NTMITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
N++I G AQ+ LA ++ D T+T ++S +G + R +F E
Sbjct: 358 NSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSE 417
Query: 307 KNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEIT--- 357
+ + M+ ++ +++ A EL M K N W +++ ++
Sbjct: 418 NKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAE 477
Query: 358 -HARNLFDRMPQHDCISWAAIIAG-YAQSGYSEDSLRLFIEMKRYG 401
A+ + D P C S +++ YA + D R+ EMK+ G
Sbjct: 478 RAAKCIIDLEPH--CSSAYVLLSNLYASASRWSDVSRIRREMKQRG 521
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 282/772 (36%), Positives = 435/772 (56%), Gaps = 82/772 (10%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
+S L VF+ M R+ V++N++IS G + A +F +M + SGY N+
Sbjct: 328 ESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE----------SGYKSNR 377
Query: 138 -----SLSAARNLFEMMPKR-------------DVVSWNTMLSGYAQNGYADAARRIFDR 179
L A+ L ++ R D++ + ++ Y++ G + A ++F
Sbjct: 378 FNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRS 437
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQK---- 230
+LE+NE+S+N LLA YVQ G+ EEA L+ E + ++ +L+ Q+
Sbjct: 438 LLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQ 497
Query: 231 -------------------------------RLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
RL AK IF+RM R+ SWN+MI GY Q
Sbjct: 498 GRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQ 557
Query: 260 NNYLAEAQRLFEEAPVK----DVFTWTAMVSGYV-----QNGKVDEARMIFDAMPEKNTV 310
N EA RLF++ + D F+ ++M+S V Q G+ ++ + M E+ +
Sbjct: 558 NGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGIL 617
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
++ Y + MD A ++++ K+V N M++ + SG A+NLFD+M Q +
Sbjct: 618 QV-VLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRN 676
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
W +I+AGYA G ++S F+EM + ++++ C++L +LE G QLH
Sbjct: 677 TALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHS 736
Query: 431 QLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
++K GF + AL+ MY KCG++ +A F+ + K+++SWN MI+GY++HG K
Sbjct: 737 LIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSK 796
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+AL+L+E M G+ P+++T + ILSACSHTGLVE+G F SM DY + ++HYTCM
Sbjct: 797 EALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCM 856
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
VDLLGRAGRL++A+ ++ MP EP+ +TWGALLGACR++ ++ AA+ +FE++P+N
Sbjct: 857 VDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNP 916
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
G YV++SN+YAA+GRW +V +R M+ +GVKK G SW+E+ +++ F G HP+ +
Sbjct: 917 GPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTE 976
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY---HSEKLAVAYGILSIPAG 726
IY L L + K G++ T +L +V + ++E Y HSE+LA++ G++S+P
Sbjct: 977 EIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKK 1036
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IRV KNLR+C DCH A K ISKI GR II RD NRFHHF G CSCGDYW
Sbjct: 1037 STIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 149/609 (24%), Positives = 290/609 (47%), Gaps = 47/609 (7%)
Query: 77 CDSALHVFNSMPRRSSVSYNAMISGYL------LNGQLDPARQVFDQMPQRDL--VSWNV 128
C + H F +P +S S++A NG P P D+ + ++
Sbjct: 18 CHYSRHFF-LLPNPNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPASDVNPLPYSS 76
Query: 129 MISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADA---ARRIFDRML 181
+I + + S +++ M D +L YA++G D AR++F+ M
Sbjct: 77 LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLF---ESKANW-EVVSWNSLMGGFVKQKRLGDAKW 237
E+N +WN ++ AY + E L+ N+ + ++ S++ + + +G +
Sbjct: 137 ERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQ 196
Query: 238 IFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
+ + V+ ++ N ++ GYA+ ++ +A +E V TW A+++GYV+
Sbjct: 197 LQSSV-VKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKIL 255
Query: 293 KVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC----KNVAS 342
+EA IFD M P+ T + + G ++++ D +++ + +
Sbjct: 256 SWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSR--DGGKQVHSKLIACGFKGDTFV 313
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N +I YA+ + +FD M + + ++W +II+ AQ G+ D+L LF+ M+ G
Sbjct: 314 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGY 373
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ NR S+L A LA + G++LHG LV+ + +G+AL+ MY KCG VEEA+
Sbjct: 374 KSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQ 433
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV-GIKPDDITMVGILSACSHTG 521
F +++++ +S+N ++AGY + G ++AL L+ M++ GI+PD T +L+ C++
Sbjct: 434 VFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQR 493
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+G + + R + N T +V + GRL+ A+ + M E +A +W ++
Sbjct: 494 NDNQGRQIHAHLIR-ANITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSM 551
Query: 582 LGACRLYGKTELAEKAAE--VIFEMEPENAGMYVLLSNLYAAS----GRWGDVSKVRLKM 635
+ + G+T+ A + + + ++P+ + +LS+ + S GR VR M
Sbjct: 552 IEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTM 611
Query: 636 RDRGVKKVT 644
+ G+ +V
Sbjct: 612 EEEGILQVV 620
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 149/633 (23%), Positives = 273/633 (43%), Gaps = 126/633 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQR 121
+ + R G D A+ + + S V++NA+I+GY+ + A +FD+M P
Sbjct: 217 VDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDN 276
Query: 122 DLVSWNVMISGYVRNKS--LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ + + G +R++ L K D N ++ YA+ ++ ++FD
Sbjct: 277 FTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDE 336
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLF------------------------------- 208
M E+N+++WN +++A Q G +A +LF
Sbjct: 337 MGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKG 396
Query: 209 --------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ N +++ ++L+ + K + +A +F + R+EVS+N ++ GY Q
Sbjct: 397 RELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQE 456
Query: 261 NYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVS 311
EA L+ E+ D FT+T +++ ++ R I A KN +
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIV 516
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
++ Y + R++ A+E+F M +N SWN+MI GY Q+GE A
Sbjct: 517 ETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA------------ 564
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
LRLF +M+ G + + +S+LS+C +L+ + G++LH
Sbjct: 565 -------------------LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNF 605
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI------------------ 473
+V+ E + L+ MY KCGS++ A+ +++ + KDVI
Sbjct: 606 IVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDA 665
Query: 474 -------------SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
WN+++AGYA G K++ F M I+ D +TMV I++ CS
Sbjct: 666 KNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSL 725
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHY-TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+E G + +S+ G + S T +VD+ + G + +A+ + NM + + +W
Sbjct: 726 PALEHGDQ-LHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK-NIVSWN 783
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
A++ +G K A +++E P+ GMY
Sbjct: 784 AMISGYSKHG----CSKEALILYEEMPKK-GMY 811
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 229/485 (47%), Gaps = 59/485 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI + + + + G + A VF S+ R+ VSYNA+++GY+ G+ + A +++ M
Sbjct: 411 DIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQ 470
Query: 120 -----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYA 170
Q D ++ +++ ++ + R + + + ++++ ++ Y++ G
Sbjct: 471 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRL 530
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGF 226
+ A+ IF+RM E+N SWN ++ Y QNG +EA LF+ + + S +S++
Sbjct: 531 NYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Query: 227 V----KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
V QK +I + + ++ YA+ + A +++++ KDV
Sbjct: 591 VSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNN 650
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY-------------VQTKRMDMAR 329
MVS +V +G+ ++A+ +FD M ++NT WN+++AGY ++ D+
Sbjct: 651 VMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY 710
Query: 330 ELFEAMTCKNVASW---------------------------NTMITGYAQSGEITHARNL 362
++ +T N+ S ++ Y++ G IT AR +
Sbjct: 711 DVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTV 770
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD M + +SW A+I+GY++ G S+++L L+ EM + G N F ++LS C++ +
Sbjct: 771 FDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLV 830
Query: 423 ELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIA 480
E G ++ + + EA ++ + + G +E+A E++ ++ +V +W ++
Sbjct: 831 EEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLG 890
Query: 481 GYARH 485
H
Sbjct: 891 ACRVH 895
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 289/823 (35%), Positives = 454/823 (55%), Gaps = 80/823 (9%)
Query: 9 QLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRH-LNSKSRNKPKPAG-DWDIRQWNV 66
Q+ ++ +LH+ + N + S + L+ L + R+ +G +I + N
Sbjct: 42 QVGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNT 101
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA----RQVFDQMPQRD 122
I H G A F+S+ ++ V++NA+I+GY G + A RQ+ D+ +
Sbjct: 102 LIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPS 161
Query: 123 LVSW-----------------------------------NVMISGYVRNKSLSAARNLFE 147
++++ ++S YV+ S+ AR +F+
Sbjct: 162 IITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFD 221
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEE 203
+ KRDV ++N M+ GYA++G + A ++F RM + N IS+ +L +
Sbjct: 222 GLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSIL----------D 271
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
C E+ A + V + G V R+ A +I Y +
Sbjct: 272 GCSTPEALAWGKAVHAQCMNTGLVDDVRVATA-----------------LIRMYMGCGSI 314
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGY 319
A+R+F++ V+DV +WT M+ GY +N +++A +F M E+ + +++ +I
Sbjct: 315 EGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINAC 374
Query: 320 VQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
+ + +ARE+ A ++ ++ YA+ G I AR +FD M + D +SW+
Sbjct: 375 ASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWS 434
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+I Y ++G E++ F MKR + + ++L+ C +L +L+LG +++ Q +K
Sbjct: 435 AMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKA 494
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
+ VGNAL+ M K GS+E A + FE +V +DV++WN MI GY+ HG ++AL LF
Sbjct: 495 DLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLF 554
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ M +P+ +T VG+LSACS G VE+G +F + G++P + Y CMVDLLGR
Sbjct: 555 DRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGR 614
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
AG LDEA+ L+ MP +P+++ W LL ACR+YG ++AE+AAE EP + +YV L
Sbjct: 615 AGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQL 674
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
S++YAA+G W +V+KVR M RGV+K G +W+EV+ K+HTF V D HP+ IYA L
Sbjct: 675 SHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAEL 734
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
L +K++G++ T+ VLH+VGE+EKE + YHSEKLA+AYG+LS+P+G PIR+ KNL
Sbjct: 735 ARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNL 794
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RVC DCH+A K ISK+ GR II RD +RFHHF G CSCGDYW
Sbjct: 795 RVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/667 (40%), Positives = 393/667 (58%), Gaps = 47/667 (7%)
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
R+V+ N +LS D AR +F+++ + + ++ Y ++ R+ +A LF+
Sbjct: 38 REVLICNHLLSRRI-----DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM 92
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+VVSWNS++ G V+ + A +FD MP R VSW M+ G ++ + +A+RLF
Sbjct: 93 PVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFY 152
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+ PVKD W +MV GY+Q GKVD+A +F MP KN +SW MI G Q +R A +L
Sbjct: 153 QMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 332 FEAM-----------------TCKNVASWN----------------------TMITGYAQ 352
F+ M C N +++ ++IT YA
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
I +R +FD W A+++GY+ + ED+L +F M R N+S F S
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L++C+ L +L+ GK++HG VK+G E FVGN+L+VMY G+V +A F +I K +
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWN++I G A+HG GK A ++F M + +PD+IT G+LSACSH G +EKG + FY
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 533 MNRDYGVIPNS-KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
M+ I +HYTCMVD+LGR G+L EA+ L++ M +P+ W ALL ACR++
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDV 512
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
+ EKAA IF ++ +++ YVLLSN+YA++GRW +VSK+R+KM+ G+ K G SW+ +
Sbjct: 513 DRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVI 572
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
+ K H F GD P RIY LE L KLK+ G+ + LHDV +E+KE ML YHS
Sbjct: 573 RGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHS 630
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
E+LA+A+G+++ G + VMKNLRVCEDCH IK IS +VGR I+LRD RFHHF G+
Sbjct: 631 ERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGT 690
Query: 772 CSCGDYW 778
CSCGDYW
Sbjct: 691 CSCGDYW 697
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 237/450 (52%), Gaps = 23/450 (5%)
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
+R IF R + ++V +G+ + + N EV+ N L+ +R+
Sbjct: 3 SRAIFQRF------RFRAFSISHVIHGKCYRSFSVTVEFQNREVLICNHLL-----SRRI 51
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
+A+ +F+++P + MITGY ++N L +A LF+E PV+DV +W +M+SG V+ G
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
++ A +FD MPE++ VSW AM+ G ++ ++D A LF M K+ A+WN+M+ GY Q
Sbjct: 112 DMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G++ A LF +MP + ISW +I G Q+ S ++L LF M R + PFT V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
++ CAN + +G Q+HG ++K+GF +V +L+ Y C + ++ F+E V + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
W +++GY+ + +DAL +F M I P+ T L++CS G ++ G E +
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MHG 350
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ G+ ++ +V + +G +++A ++ + F+ +W +++ C +G+
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRG- 408
Query: 593 LAEKAAEVIF------EMEPENAGMYVLLS 616
K A VIF EP+ LLS
Sbjct: 409 ---KWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 154/600 (25%), Positives = 268/600 (44%), Gaps = 100/600 (16%)
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS 125
V I H+ + D A VFN +P Y MI+GY + +L A +FD+MP RD+VS
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
WN MISG V ++ A LF+ MP+R VVSW M++G ++G D A R+F +M K+
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-- 243
+WN ++ Y+Q G++++A LF+ V+SW +++ G + +R G+A +F M
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 244 -------------------------------------VRDEVSWNTMITGYAQNNYLAEA 266
+ +E ++IT YA + ++
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT---- 322
+++F+E + V WTA++SGY N K ++A IF M + + + A + +
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 323 KRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+D +E+ + + N+++ Y+ SG + A ++F ++ + +SW +II
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
G AQ G + + +F +M R + + FT +LS C++ LE G++L
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL---------- 449
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
Y + +D+ + + M+ R G K+A L E M
Sbjct: 450 -----------FYYMSSGINH--------IDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAG 557
+KP+++ + +LSAC V++G + ++ N D +S Y + ++ AG
Sbjct: 491 V---VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS---KSSAAYVLLSNIYASAG 544
Query: 558 RLDEAQNL----MKNMPFEPDAATWGALLG------------ACRLYGKTE-LAEKAAEV 600
R L KN + ++W + G R+Y K E L EK E+
Sbjct: 545 RWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKEL 604
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/625 (40%), Positives = 381/625 (60%), Gaps = 4/625 (0%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI QWN IT H+R G +A VF+ MP R+ ++N MISG + N L AR+VFD MP
Sbjct: 42 DIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMP 101
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
R+ VSW +++GY R ++ AR LF+ MP R+VVSWN M+SGY +NG + AR +FD
Sbjct: 102 VRNPVSWAALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDM 161
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M +N++SW +++ Y++ R+ EA LF+ + N+L+ G+V L DA+ +F
Sbjct: 162 MPSRNDVSWLTMISGYIKKRRLREARELFDLSPSHPTSVCNALLSGYVALSCLKDAEELF 221
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
RM RD VSWN MITGYA+ + AQ LF+E P KD +WTA++ GY+QNG VD +
Sbjct: 222 GRMQRRDPVSWNVMITGYARAGRMQVAQSLFDEMPQKDTISWTAVMRGYLQNGDVDASWK 281
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+F +P+++ V+WN M+ G+VQ++R+D A LF M +++ SWNT++ G+ Q G++ A
Sbjct: 282 VFQDIPDRDVVAWNTMMGGFVQSERLDDALRLFAEMPERDLVSWNTILQGHVQQGDMATA 341
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F MP+ D SW +I+G+ G +L L EM R G R + + + V+S CA+L
Sbjct: 342 NTWFRGMPEKDETSWNTLISGHKDEG----ALALLSEMIRGGLRPDEATLSVVISICASL 397
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+L GK +H VK GFE V ++L+ MY KCG + EA F+ +V +D ++WN MI
Sbjct: 398 VALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMI 457
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
A YA HG +AL LF M G +PD T + +LSAC+H G + +G YF SM D+ +
Sbjct: 458 ATYAYHGMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNL 517
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P S HY+CMVDLLGR G + +A + + +P + W L AC +G +L E A+
Sbjct: 518 TPRSDHYSCMVDLLGRLGFIYQAYDFTRKIPSDLQINAWETLFSACNAHGDVQLGEVIAK 577
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ + P + GMY LL+N+YA+ W + VR M+++G+KK TG SW+E++ +V +FS
Sbjct: 578 DVLQARPSDGGMYTLLANIYASKEMWSSAASVRGVMKEQGLKKETGCSWVELKGEVVSFS 637
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQ 684
D HP + I ++ L +++
Sbjct: 638 SNDNAHPLIEWICQEVDNLSVMIEE 662
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/607 (41%), Positives = 386/607 (63%), Gaps = 6/607 (0%)
Query: 95 YNAMISGYLLNGQLDP--ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
+N+++S Q+ P + V D ++ N +I+ + + AR +FE MP R
Sbjct: 36 HNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDR 95
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
DVVSW +++GY + G + A+ +FDR KN ++W L++ YV+ RIEEA LF++
Sbjct: 96 DVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAM 155
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
V+SWN+++ G+ ++ + A +F++MP R+ VSWNT+IT + Q + EAQ LF
Sbjct: 156 PVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFN 215
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
P +DV +WT MV+G +NG++D+AR++FD MP +N VSWN MI GY Q R+D A +L
Sbjct: 216 RMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKL 275
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
FE M + ++SWNTMITG+ Q+G++ A + F +M + ++W A+I+G+ Q G SE++L
Sbjct: 276 FEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEAL 335
Query: 392 RLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
++F EM+ + N F SVL C+ LA+L G+Q+H + K ++ V +AL+ M
Sbjct: 336 KIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINM 395
Query: 451 YCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
Y KCG +E A F++ I +DV+SWN MIA YA HG G A+ LF+ M+ +G +PD++
Sbjct: 396 YSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNV 455
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + +LSACSH GLV++G + F ++ RD + H+TC+VDL GRAGRL EA + +K
Sbjct: 456 TYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKG 515
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
+ +P A+ W ALL C ++G +L + AE + E EPENAG Y++LSN+YA++G+W +
Sbjct: 516 LEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREA 575
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+ VR+KM+D+G+KK G SW+EV N VH F VGD H E + IY L +L K+K+ G
Sbjct: 576 AGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHT 635
Query: 689 YSTKLVL 695
L +
Sbjct: 636 LYEDLTI 642
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/510 (31%), Positives = 279/510 (54%), Gaps = 35/510 (6%)
Query: 7 LRQLHSSCILHQHT--QSINRLQSP-----ANTNPYPSKKTL----KRHLNSKSRNKPKP 55
L LH+S + Q + Q + ++ SP AN+N S + K ++R +
Sbjct: 32 LCNLHNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEE 91
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFN-SMPRRSSVSYNAMISGYLLNGQLDPARQV 114
D D+ W IT +++ G + A +F+ + ++ V++ A++SGY+ +++ AR++
Sbjct: 92 MPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRL 151
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
FD MP ++++SWN MI GY R + A +LFE MP+R+VVSWNT+++ + Q D A+
Sbjct: 152 FDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQ 211
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
+F+RM E++ ISW ++A +NGRI++A +LF+ VVSWN+++ G+ + RL +
Sbjct: 212 ELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDE 271
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
A +F++MP R+ SWNTMITG+ QN L A F + K+V TWTA++SG+VQ+G+
Sbjct: 272 AFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRS 331
Query: 295 DEARMIFDAMPEKNTVSWN-----------AMIAGYVQTKRMDMARELFEAMTCKNVAS- 342
+EA IF M N V N + +A + +++ ++ + VA
Sbjct: 332 EEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQI---HQIISKTVYQEVADV 388
Query: 343 WNTMITGYAQSGEITHARNLFD--RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
+ +I Y++ GE+ AR +FD + D +SW +IA YA G+ ++ LF EM+
Sbjct: 389 VSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQAL 448
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVK---VGFEAGCFVGNALLVMYCKCGSV 457
G R + + ++LS C++ ++ G +L LV+ + F L+ ++ + G +
Sbjct: 449 GFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHF--TCLVDLFGRAGRL 506
Query: 458 EEAYHAFEEIVDKDVIS-WNTMIAGYARHG 486
+EA+ + + K S W ++AG HG
Sbjct: 507 QEAFDFIKGLEVKPSASVWAALLAGCNVHG 536
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/601 (41%), Positives = 370/601 (61%), Gaps = 4/601 (0%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
H R G +A VF+ M R+ ++N MISG + NG L AR VFD MP R+ VSW ++
Sbjct: 3 HFRAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALL 62
Query: 131 SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
+GY R ++ AR LF+ MP R VVSWN M+SGY NG D AR +FD M +N++SW
Sbjct: 63 TGYARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLM 122
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+++ Y++ R+ EA +F+ + N+L+ G+ + L DA+ +F RM D VSW
Sbjct: 123 MISGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLVSW 182
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N MITGY + + AQRLF+E P KD +WTA+V GY+QNG VD A +F MP+++ +
Sbjct: 183 NAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDVL 242
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
+WN M++G+V ++R+D A LF M +++ SWNT++ GY Q G++ A F +MP+ D
Sbjct: 243 AWNTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRKMPEKD 302
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
SW +I+GY G +L L EM + G R +++ ++ +S C++LA+L G+ +H
Sbjct: 303 EASWNTLISGYKDEG----ALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCGRMVHV 358
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+K GFE V ++L+ MY KCG + EA F+ IV +D ++WN MIA YA HG +
Sbjct: 359 CTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAE 418
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
AL LF+ M G PD T + +LSAC+H G + +G +F SM +D+ +IP S HY+CMV
Sbjct: 419 ALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDHYSCMV 478
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLLGR+G + +A N + +P + W L +C +G +L E A+ + + P + G
Sbjct: 479 DLLGRSGFVHQAYNFTRRIPSDLQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDGG 538
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
MY LLSN+YAA G W + VR M+++G+KK TG SW+E++ V +FS D HP ++
Sbjct: 539 MYTLLSNIYAAKGMWSSAASVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDKAHPLIEQ 598
Query: 671 I 671
I
Sbjct: 599 I 599
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 232/466 (49%), Gaps = 49/466 (10%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W +T + R G A +F+ MP RS VS+NAMISGYL NG +D AR +FD MP R+
Sbjct: 58 WAALLTGYARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARND 117
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKR------------------------------- 152
VSW +MISGY++ K + AR +F+ P
Sbjct: 118 VSWLMMISGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTP 177
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
D+VSWN M++GY + G A+R+FD M EK+ +SW ++ Y+QNG ++ A +F+
Sbjct: 178 DLVSWNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMP 237
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ +V++WN++M GFV +RL DA +F MP RD VSWNT++ GY Q + A F +
Sbjct: 238 DRDVLAWNTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRK 297
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
P KD +W ++SGY G ++ + + +W+ I+ + R +
Sbjct: 298 MPEKDEASWNTLISGYKDEGALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCGR-MV 356
Query: 333 EAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
T K + +++I+ Y++ G IT A +FD + Q D ++W A+IA YA G +
Sbjct: 357 HVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLA 416
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG------KQLHGQLVKVGFEAGC 441
++L LF M + G + + F SVLS CA+ L G Q L+ C
Sbjct: 417 AEALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDHYSC 476
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
V + + G V +AY+ I D + +W T+ + HG
Sbjct: 477 MVD-----LLGRSGFVHQAYNFTRRIPSDLQINAWETLFSSCNAHG 517
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 225/461 (48%), Gaps = 57/461 (12%)
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
A+ + GR+ A +F+ + V +WN ++ G V+ L DA+ +FD MP R+ VSW +
Sbjct: 2 AHFRAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAAL 61
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
+TGYA+ +AEA+ LF+ P + V +W AM+SGY+ NG VD AR +FD MP +N VSW
Sbjct: 62 LTGYARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWL 121
Query: 314 AMIAGYVQTKRMDMARELFE-------------------------------AMTCKNVAS 342
MI+GY++ KR+ ARE+F+ M ++ S
Sbjct: 122 MMISGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLVS 181
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN MITGY ++G + A+ LFD MP+ D +SW AI+ GY Q+G + + ++F +M
Sbjct: 182 WNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDM----- 236
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG--FEAGCFVGNALLVMYCKCGSVEEA 460
P VL+ ++ + ++L L + N +L Y + G ++ A
Sbjct: 237 -----PDRDVLAWNTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGA 291
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F ++ +KD SWNT+I+GY G AL L M G +PD T +S CS
Sbjct: 292 TAWFRKMPEKDEASWNTLISGYKDEG----ALNLLSEMTQGGYRPDQATWSVAISICSSL 347
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
+ G + G ++ + ++ + + G + EA + ++ + D TW A
Sbjct: 348 AALGCG-RMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVF-DLIVQRDTVTWNA 405
Query: 581 LLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
++ +G LA +A + M P++A +LS
Sbjct: 406 MIATYAYHG---LAAEALTLFDRMTKDGFSPDHATFLSVLS 443
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/607 (41%), Positives = 385/607 (63%), Gaps = 6/607 (0%)
Query: 95 YNAMISGYLLNGQLDP--ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
+N+++S Q+ P + V D ++ N +I+ + + AR +FE MP R
Sbjct: 36 HNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDR 95
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
DVVSW +++GY + G + A+ +FDR KN ++W L++ YV+ RIEEA LF++
Sbjct: 96 DVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAM 155
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
V+SWN+++ G+ ++ + A +F+ MP R+ VSWNT+IT + Q + EAQ LF
Sbjct: 156 PVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFN 215
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
P +DV +WT MV+G +NG++D+AR++FD MP +N VSWN MI GY Q R+D A +L
Sbjct: 216 RMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKL 275
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
FE M + ++SWNTMITG+ Q+G++ A + F +M + ++W A+I+G+ Q G SE++L
Sbjct: 276 FEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEAL 335
Query: 392 RLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
++F EM+ + N F SVL C+ LA+L G+Q+H + K ++ V +AL+ M
Sbjct: 336 KIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINM 395
Query: 451 YCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
Y KCG +E A F++ I +DV+SWN MIA YA HG G A+ LF+ M+ +G +PD++
Sbjct: 396 YSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNV 455
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + +LSACSH GLV++G + F ++ RD + H+TC+VDL GRAGRL EA + +K
Sbjct: 456 TYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKG 515
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
+ +P A+ W ALL C ++G +L + AE + E EPENAG Y++LSN+YA++G+W +
Sbjct: 516 LEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREA 575
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+ VR+KM+D+G+KK G SW+EV N VH F VGD H E + IY L +L K+K+ G
Sbjct: 576 AGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHT 635
Query: 689 YSTKLVL 695
L +
Sbjct: 636 LYEDLTI 642
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/510 (31%), Positives = 279/510 (54%), Gaps = 35/510 (6%)
Query: 7 LRQLHSSCILHQHT--QSINRLQSP-----ANTNPYPSKKTL----KRHLNSKSRNKPKP 55
L LH+S + Q + Q + ++ SP AN+N S + K ++R +
Sbjct: 32 LCNLHNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEE 91
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFN-SMPRRSSVSYNAMISGYLLNGQLDPARQV 114
D D+ W IT +++ G + A +F+ + ++ V++ A++SGY+ +++ AR++
Sbjct: 92 MPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRL 151
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
FD MP ++++SWN MI GY R + A +LFE MP+R+VVSWNT+++ + Q D A+
Sbjct: 152 FDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQ 211
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
+F+RM E++ ISW ++A +NGRI++A +LF+ VVSWN+++ G+ + RL +
Sbjct: 212 ELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDE 271
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
A +F++MP R+ SWNTMITG+ QN L A F + K+V TWTA++SG+VQ+G+
Sbjct: 272 AFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRS 331
Query: 295 DEARMIFDAMPEKNTVSWN-----------AMIAGYVQTKRMDMARELFEAMTCKNVAS- 342
+EA IF M N V N + +A + +++ ++ + VA
Sbjct: 332 EEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQI---HQIISKTVYQEVADV 388
Query: 343 WNTMITGYAQSGEITHARNLFD--RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
+ +I Y++ GE+ AR +FD + D +SW +IA YA G+ ++ LF EM+
Sbjct: 389 VSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQAL 448
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVK---VGFEAGCFVGNALLVMYCKCGSV 457
G R + + ++LS C++ ++ G +L LV+ + F L+ ++ + G +
Sbjct: 449 GFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHF--TCLVDLFGRAGRL 506
Query: 458 EEAYHAFEEIVDKDVIS-WNTMIAGYARHG 486
+EA+ + + K S W ++AG HG
Sbjct: 507 QEAFDFIKGLEVKPSASVWAALLAGCNVHG 536
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/628 (39%), Positives = 400/628 (63%), Gaps = 22/628 (3%)
Query: 44 HLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL 103
H + +PK + D+ N I+ +RNG + A +F++MP+R+ V++N+MI+GY+
Sbjct: 50 HCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYV 109
Query: 104 LNGQLDPARQVFDQMPQRDLVSWNVMISGYV--RNKSLSAARNLFEMMPKRDVVSWNTML 161
++ AR++FD+MP RD+VSWN+MISGYV + + + R+LF+ MP+RD VSWNTM+
Sbjct: 110 RRREMAKARKLFDEMPDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMI 169
Query: 162 SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
SGY ++G D A ++FD M E+N +SWN ++ ++QNG +E A F + S ++
Sbjct: 170 SGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSA 229
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEV------SWNTMITGYAQNNYLAEAQRLFEEAPV 275
L+ G ++ L +AK I +D+ ++N ++ GY QN + +A++LF++ P
Sbjct: 230 LVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPF 289
Query: 276 KD------------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
D V +W +M+ YV+ + AR++FD M E++T+SWN MI+GYV+
Sbjct: 290 YDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMS 349
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
M+ A LF+ M + +WN+MI+G+AQ G + AR LF +PQ + +SW ++IAGY
Sbjct: 350 DMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYEN 409
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G + + L+ +M GE+ +R +SVLS C+ A+L LG Q+H Q+ K +
Sbjct: 410 NGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPI 468
Query: 444 GNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
N+L+ MY +CG++ EA F+E+ + K+VISWN MI GYA HGF DAL LFE MK +
Sbjct: 469 NNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLK 528
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
++P IT + +L+AC+H G V++G +F SM ++G+ P +H+ +VD++GR G+L+EA
Sbjct: 529 VRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEA 588
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+L+ +MPFEPD A WGALLGACR++ ELA AAE + ++EPE++ YVLL N+YA
Sbjct: 589 MDLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADV 648
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
G+W + +++R+ M ++K GYSW++
Sbjct: 649 GQWDNATEMRMMMERNNIRKQPGYSWVD 676
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/737 (36%), Positives = 418/737 (56%), Gaps = 55/737 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY-------------VRNKSLSAA 142
NA+I Y LD AR+VF++MP RD+VSWN +ISGY R ++L
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213
Query: 143 RNLFEMMP--------------------------KRDVVSWNTMLSGYAQ-NGYADAARR 175
+ + M K+DV+ N +LS Y + NG D RR
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDG-RR 272
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW---EVVSWNSLMGGFVKQKRL 232
IFD+M+ ++ +SWN ++ Y Q G EE+ LF N ++++ S++ L
Sbjct: 273 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDL 332
Query: 233 GDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
K++ D M D + N +I YA+ L +Q +F KD +W +M++ Y
Sbjct: 333 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 392
Query: 289 VQNGKVDEARMIFDAMP---EKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVA 341
+QNG DEA +F M + ++V++ +++ Q + + +EL + N+
Sbjct: 393 IQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIV 452
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
NT++ YA+ GE+ + +F+ M D I+W IIA S LR+ M+ G
Sbjct: 453 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 512
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ + S+L C+ LA+ GK++HG + K+G E+ VGN L+ MY KCGS+ ++
Sbjct: 513 VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSF 572
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + KDV++W +I+ +G GK A+ F M+ GI PD + V I+ ACSH+G
Sbjct: 573 QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 632
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE+G YF+ M +DY + P +HY C+VDLL R+ LD+A++ + +MP +PD++ WGAL
Sbjct: 633 LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 692
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
L ACR+ G TE+AE+ +E I E+ P++ G YVL+SN+YAA G+W V +R ++ RG+K
Sbjct: 693 LSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLK 752
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G SW+E+QNKV+ F G + + + L L + ++G++ + + VLHD+ E+
Sbjct: 753 KDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDED 812
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EK +L HSE+LA+A+G+L+ G P++VMKNLRVCEDCH K+ISKIV R +++RD
Sbjct: 813 EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDA 872
Query: 762 NRFHHFSGGSCSCGDYW 778
NRFH F G+CSCGDYW
Sbjct: 873 NRFHVFKDGACSCGDYW 889
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 244/564 (43%), Gaps = 94/564 (16%)
Query: 129 MISGYVRNKSLSAARNLFEMM-PKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEK 183
+I+ Y + +++ ++F + P +V WN+++ NG A ++ L+
Sbjct: 54 LIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQP 113
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIF 239
+ ++ ++ A E A + + + ++ N+L+ + + L A+ +F
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVF 173
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----------------------------E 271
+ MP+RD VSWN++I+GY N Y EA ++ E
Sbjct: 174 EEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVE 233
Query: 272 EAPV-----------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
E + KDV ++S Y + + + R IFD M ++ VSWN MI GY
Sbjct: 234 EGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYS 293
Query: 321 QTKRMDMARELFEAMT---------------------------------------CKNVA 341
Q + + +LF M C A
Sbjct: 294 QVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 353
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
S N +I YA+ G + ++ +F M D +SW ++I Y Q+G +++++LF +M +
Sbjct: 354 S-NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTD 411
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ + + +LS L L LGK+LH L K+GF + V N L+ MY KCG + ++
Sbjct: 412 VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSL 471
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
FE + +D+I+WNT+IA L + M+T G+ PD TM+ IL CS
Sbjct: 472 KVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLA 531
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+G E + + G+ + ++++ + G L + + K M D TW AL
Sbjct: 532 AKRQGKEIHGCIFK-LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTAL 589
Query: 582 LGACRLYGKTELAEKAAEVIFEME 605
+ AC +YG+ +KA EME
Sbjct: 590 ISACGMYGE---GKKAVRAFGEME 610
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 188/410 (45%), Gaps = 44/410 (10%)
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMA 328
+P +V+ W +++ NG EA ++ + +T ++ ++I +MA
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134
Query: 329 RELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ + + + S N +I Y + ++ AR +F+ MP D +SW ++I+GY +
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
GY ++L ++ + G + +SVL C L S+E G +HG + K+G + V
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
N LL MYCK + + F+++V +D +SWNTMI GY++ G ++++ LF M K
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFK 313
Query: 505 PDDITMVGILSACSHTGLVEKG------------------TEYFYSMNRDYGVI------ 540
PD +T+ IL AC H G +E G + +M G +
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 541 ------PNSKHYTCMVDLLGRAGRLDEAQNLMKNMP--FEPDAATWGALLGACRLYGKTE 592
+S + M+++ + G DEA L K M +PD+ T+ LL G
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLH 433
Query: 593 LAEKAAEVIFEMEPENAGMYV--LLSNLYAASGRWGDVSKVRLKMRDRGV 640
L ++ + +M N+ + V L ++YA G GD KV M+ R +
Sbjct: 434 LGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 482
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 150/285 (52%), Gaps = 8/285 (2%)
Query: 346 MITGYAQSGEITHARNLFDRM--PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+I YA + T + ++F R+ P ++ W +II +G ++L L+ E +R +
Sbjct: 54 LIAKYAHFRDPTSSFSVF-RLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQ 112
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ F SV++ CA L E+ K +H +++ +GF + ++GNAL+ MYC+ +++A
Sbjct: 113 PDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKV 172
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
FEE+ +DV+SWN++I+GY +G+ +AL ++ + +G+ PD TM +L AC G V
Sbjct: 173 FEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSV 232
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E+G + + + G+ + ++ + + L + + + M DA +W ++
Sbjct: 233 EEG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR-DAVSWNTMIC 290
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
Y + L E++ ++ EM + + ++++ A G GD+
Sbjct: 291 G---YSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDL 332
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/694 (40%), Positives = 395/694 (56%), Gaps = 70/694 (10%)
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EK 183
+ S R+ +S A +LF + + ++ WN+M+ G + + A F RM+ E
Sbjct: 68 IEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEP 127
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
N ++ LL ++C S + + + L GFV
Sbjct: 128 NSYTFPFLL----------KSCAKLASAHEGKQIHAHVLKLGFVS--------------- 162
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
D ++I YAQ+ + AQ +F+++ +D ++TA+++GY G +D AR +FD
Sbjct: 163 --DVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDE 220
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------------------------- 335
MP K+ VSWNAMIAGY Q R A LFE M
Sbjct: 221 MPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLG 280
Query: 336 -----------TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
C N+ N +I Y++ G++ AR LFD M + D ISW +I GY
Sbjct: 281 NSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHM 340
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
+++L LF EM G F S+L +CA+L +++LGK +H + K +
Sbjct: 341 CSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLS 400
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
+L+ +Y KCG++ A F+ + K + SWN MI G A HG A LF M + GI+
Sbjct: 401 TSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIE 460
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
P++IT VGILSAC H GLV+ G ++F SM +DY + P S+HY CM+DLLGRAG +EA++
Sbjct: 461 PNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAES 520
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
L++NM +PD A WG+LLGACR +G+ EL E AE +FE+EP+N G YVLLSN+YA +G+
Sbjct: 521 LLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGK 580
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W DV+++R ++ DRG+KKV G + +EV N VH F VGD +HP+ + IY LEE++ +LK
Sbjct: 581 WDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKV 640
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
GFV T VL+D+ EE KE L +HSEKLA+A+G++S G PIR++KNLRVC +CH+A
Sbjct: 641 FGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSA 700
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKI R II RD NRFHHF GSCSC DYW
Sbjct: 701 TKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 225/554 (40%), Gaps = 102/554 (18%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA--------------------- 111
R+G A+ +FNS+ + +N+MI G L+ L PA
Sbjct: 75 RSGDISYAISLFNSIEEPNLFIWNSMIRG--LSMSLSPALALVFFVRMIYSGVEPNSYTF 132
Query: 112 ----------------RQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPK 151
+Q+ + + VS +I+ Y ++ ++ A+ +F+
Sbjct: 133 PFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNF 192
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
RD +S+ +++GYA GY D AR++FD M K+ +SWN ++A Y Q GR +EA +LFE
Sbjct: 193 RDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDM 252
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDA--------KWIFDRMPVRDEVSWNTMITGYAQNNYL 263
V S + + +A WI DR + N +I Y++ L
Sbjct: 253 RKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDL 312
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGY 319
A+ LF++ +DV +W M+ GY EA +F M E +++ +++
Sbjct: 313 QTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSC 372
Query: 320 VQTKRMDMARELFEAMTCKNV-----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+D+ + + A KN + ++I YA+ G I AR +FD M SW
Sbjct: 373 AHLGAIDLGKWI-HAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASW 431
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
A+I G A G ++ + LF +M G N F +LS C + ++LG+Q +V+
Sbjct: 432 NAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ 491
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
+ + + MI R G ++A L
Sbjct: 492 ------------------------------DYKISPKSQHYGCMIDLLGRAGLFEEAESL 521
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVD 551
++M+ +KPD +L AC G VE G E + + D N Y + +
Sbjct: 522 LQNME---VKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPD-----NPGAYVLLSN 573
Query: 552 LLGRAGRLDEAQNL 565
+ AG+ D+ +
Sbjct: 574 IYAGAGKWDDVARI 587
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 189/395 (47%), Gaps = 32/395 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I + ++G ++A VF+ R ++S+ A+I+GY L G +D ARQ+FD+MP +D+VSWN
Sbjct: 171 INMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWN 230
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARR----IFDR 179
MI+GY + A LFE M K +V + ++LS AQ+ D I DR
Sbjct: 231 AMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDR 290
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
L N N L+ Y + G ++ A LF+ +V+SWN ++GG+ +A +F
Sbjct: 291 GLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALF 350
Query: 240 DRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT------WTAMVSGYV 289
M E+++ +++ A + + + A + F T+++ Y
Sbjct: 351 REMLASGVEPTEITFLSILPSCAHLGAIDLGKWI--HAYINKNFNSVSTSLSTSLIDLYA 408
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNT 345
+ G + AR +FD M K+ SWNAMI G + D A ELF M+ N ++
Sbjct: 409 KCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVG 468
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRY 400
+++ +G + + F M Q IS + +I ++G E++ L M+
Sbjct: 469 ILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEV- 527
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+ + + + S+L C + +ELG+ + +L ++
Sbjct: 528 --KPDGAIWGSLLGACRDHGRVELGELVAERLFEL 560
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 10/223 (4%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM--YCKCGSVEEAY 461
L P +LS C ++ + KQ+H ++K G F + L+ + G + A
Sbjct: 27 LQEHPSLKLLSKCQSIRTF---KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAI 83
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F I + ++ WN+MI G + AL+ F M G++P+ T +L +C+
Sbjct: 84 SLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLA 143
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+G + ++ G + + +T ++++ ++G ++ AQ + F DA ++ AL
Sbjct: 144 SAHEGKQ-IHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFR-DAISFTAL 201
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
+ L+G ++A ++ EM ++ + + YA GR
Sbjct: 202 IAGYALWGYM---DRARQLFDEMPVKDVVSWNAMIAGYAQMGR 241
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY---------------LL 104
+++ N I + + G +A +F+ M R +S+N MI GY +L
Sbjct: 295 NLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREML 354
Query: 105 NGQLDPARQVF-------DQMPQRDLVSW-----------------NVMISGYVRNKSLS 140
++P F + DL W +I Y + ++
Sbjct: 355 ASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIV 414
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AAR +F+ M + + SWN M+ G A +G AD A +F +M +E NEI++ G+L+A
Sbjct: 415 AARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACK 474
Query: 197 QNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G ++ F S +S + ++ + +A+ + M V+ D W
Sbjct: 475 HAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIW 534
Query: 251 NTMITGYAQNNYLAE-----AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
+++ G +++ E A+RLFE P + + + + Y GK D+ I
Sbjct: 535 GSLL-GACRDHGRVELGELVAERLFELEP-DNPGAYVLLSNIYAGAGKWDDVARI 587
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/667 (40%), Positives = 392/667 (58%), Gaps = 47/667 (7%)
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
R+V+ N +L N D AR +FD++ + + +++ Y ++ R+ +A LF+
Sbjct: 38 REVLICNHLL-----NRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEM 92
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+VVSWNS++ G V+ + A +FD MP R VSW M+ G + + +A+RLF
Sbjct: 93 PLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFC 152
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+ PVKD+ W AMV GY+Q GKVD+A +F MP KN +SW MI G Q +R A L
Sbjct: 153 QMPVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNL 212
Query: 332 FEAM-----------------TCKNVASWN----------------------TMITGYAQ 352
F+ M C N +++ ++IT YA
Sbjct: 213 FKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYAN 272
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
+R +F M W A+++GY+ + ED+L +F EM R N+S F S
Sbjct: 273 CKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASG 332
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L++C+ L +L+ GK++HG VK+G FVGN+L+VMY G+V +A F EI K +
Sbjct: 333 LNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSI 392
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWN++I G A+HG GK A ++F M + +PD+IT G+LSACSH G ++KG + FY
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYY 452
Query: 533 MNRDYGVIPNS-KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
++ I +HYTCMVD+LGR G L EA+ L+++M +P+ W ALL ACR++
Sbjct: 453 ISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDV 512
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
+ EKAA IF ++ +++ YVLLSN+YA++GRW VSK+R+KM+ +G+ K G SW+ +
Sbjct: 513 DRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVI 572
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
+ K H F GD P RI+ LE L KLK+ G+V + LHDV +E+KE ML YHS
Sbjct: 573 RGKKHEFFSGD--RPHCLRIFEKLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHS 630
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
E+LA+A+G+++ G + VMKNLRVCEDCH IK IS++VG I+LRD RFHHF G
Sbjct: 631 ERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGM 690
Query: 772 CSCGDYW 778
CSCGDYW
Sbjct: 691 CSCGDYW 697
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 220/410 (53%), Gaps = 17/410 (4%)
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
N EV+ N L+ +RL +A+ +FD++P + MI+GY ++N L +A LF+E
Sbjct: 37 NREVLICNHLL-----NRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDE 91
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
P++DV +W +M+SG V+ G +D A +FD MPE++ VSW AM+ G + +D A LF
Sbjct: 92 MPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLF 151
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
M K++A+WN M+ GY Q G++ A LF +MP+ + ISW +I G Q+ S ++L
Sbjct: 152 CQMPVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALN 211
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF M R + FT V++ CAN + +G Q+HG ++K GF +V +L+ +Y
Sbjct: 212 LFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYA 271
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
C E++ F E+V + V W +++GY+ + +DAL +F M I P+ T
Sbjct: 272 NCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFAS 331
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
L++CS G ++ G E + + G+ + +V + +G +++A ++ + F+
Sbjct: 332 GLNSCSALGTLDWGKE-IHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEI-FK 389
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIF------EMEPENAGMYVLLS 616
+W +++ C +G+ K A VIF EP+ LLS
Sbjct: 390 KSIVSWNSIIVGCAQHGRG----KWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 249/552 (45%), Gaps = 83/552 (15%)
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS 125
V I H+ N D A VF+ +P Y MISGY + +L A +FD+MP RD+VS
Sbjct: 40 VLICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVS 99
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
WN MISG V + A +F+ MP+R VVSW M++G + G D A R+F +M K+
Sbjct: 100 WNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDI 159
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-- 243
+WN ++ Y+Q G++++A LF+ V+SW +++ G + +R G+A +F M
Sbjct: 160 AAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRC 219
Query: 244 -------------------------------------VRDEVSWNTMITGYAQNNYLAEA 266
+ +E ++IT YA ++
Sbjct: 220 CIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDS 279
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT---- 322
+++F E + V WTA++SGY N K ++A +F M + + + A + +
Sbjct: 280 RKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSAL 339
Query: 323 KRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+D +E+ + + N+++ Y+ SG + A ++F + + +SW +II
Sbjct: 340 GTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSII 399
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
G AQ G + + +F +M R + + FT +LS C++ L+ G++L
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFY-------- 451
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
++ + L +D+ + + M+ R G K+A L ESM
Sbjct: 452 ---YISSGL------------------NHIDRKIQHYTCMVDILGRCGELKEAEKLIESM 490
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAG 557
+KP+++ + +LSAC V++G + ++ N D +S Y + ++ AG
Sbjct: 491 V---VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS---KSSAAYVLLSNIYASAG 544
Query: 558 RLDEAQNLMKNM 569
R L M
Sbjct: 545 RWSSVSKLRVKM 556
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/473 (50%), Positives = 333/473 (70%)
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
E + V A++ Y + ++ A +F+ M+ ++ +WN MITG+AQ+ ++ A LF
Sbjct: 42 ESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYE 101
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
M + D +SW A+IAGYAQ+GY ++SL +F +M++ G + +R SVLS CA+LA+LELG
Sbjct: 102 MSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELG 161
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+Q H +V+ GF VG+AL+ MY K GS+E+A F+++ ++ +SWN++I G A+H
Sbjct: 162 RQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQH 221
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G G DA++LFE M GIKP++I+ VG+LSACSHTGLV +G YF M ++YG++P+ H
Sbjct: 222 GRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSH 281
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
YTCM+DLLGRAG LDEA+N + MP EPD + WGALLGACR++G TELA++ AE + ME
Sbjct: 282 YTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGME 341
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
+ AG+YVLLSN+YAA+G+W D +KVR M+DRGV K GYSW+EV+ +H F G+T H
Sbjct: 342 VQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSH 401
Query: 666 PEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
P+ I+ +LE L K+K G+V + VL DV ++EKE L +HSEKLA+A+GI++
Sbjct: 402 PQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNP 461
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IRV KNLRVC DCH IK IS R I++RD NRFHHF G CSCGDYW
Sbjct: 462 GTTIRVAKNLRVCGDCHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 150/292 (51%), Gaps = 16/292 (5%)
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
M FES +VV +L+ + + L DA +FD+M R +WN MITG+AQN + +
Sbjct: 39 MGFES----DVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKK 94
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A +LF E +DV +WTA+++GY QNG DE+ +F+ M K + + I G V +
Sbjct: 95 ALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQM-RKTGMKSDRFIMGSVLSACA 153
Query: 326 DMAR-EL---FEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
D+A EL F A + ++ + ++ YA+SG + A +FD+MPQ + +SW +
Sbjct: 154 DLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNS 213
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-V 435
II G AQ G D++ LF +M + G + N F VLS C++ + G+ + +
Sbjct: 214 IITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNY 273
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
G ++ + + G ++EA + + V+ DV W ++ HG
Sbjct: 274 GIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHG 325
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 39/314 (12%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V A++ Y G L+ A VFD+M +R +WN MI+G+ +N+ + A LF M +R
Sbjct: 46 VVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSER 105
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA---- 204
DVVSW +++GYAQNGY D + +F++M ++ + +L+A +E
Sbjct: 106 DVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFH 165
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+ +S ++V ++L+ + K + DA +FD+MP R+EVSWN++ITG AQ+
Sbjct: 166 AYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGN 225
Query: 265 EAQRLFE---EAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
+A LFE +A +K + ++ ++S G V+E R F+ M + +
Sbjct: 226 DAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGI---------- 275
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIA 379
+V+ + MI ++G + A N + MP + D W A++
Sbjct: 276 ----------------VPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLG 319
Query: 380 GYAQSGYSEDSLRL 393
G +E + R+
Sbjct: 320 ACRIHGNTELAKRI 333
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 33/221 (14%)
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
G + N+ ++V+ CA++ASLE GKQ H ++K+GFE+ V AL+ MY +CGS+E+A
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64
Query: 461 YHAFE-------------------------------EIVDKDVISWNTMIAGYARHGFGK 489
H F+ E+ ++DV+SW +IAGYA++G+G
Sbjct: 65 GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
++L +F M+ G+K D M +LSAC+ +E G + F++ G + + +
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVVGSAL 183
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
VD+ ++G +++A + MP + + +W +++ C +G+
Sbjct: 184 VDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHGR 223
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 159/329 (48%), Gaps = 26/329 (7%)
Query: 33 NPYPSKKTLKRHLNSKSRNKPKPAGDWDIR---QWNVAITT---HM--RNGCCDSALHVF 84
N + +K + S + K A ++ I+ + +V + T HM R G + A HVF
Sbjct: 9 NQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVF 68
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
+ M RS+ ++NAMI+G+ N + A ++F +M +RD+VSW +I+GY +N + N
Sbjct: 69 DKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLN 128
Query: 145 LFEMMPKRDVVS----WNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
+F M K + S ++LS A + R+ +++ + + + L+ Y
Sbjct: 129 VFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYA 188
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNT 252
++G +E+AC +F+ VSWNS++ G + R DA +F++M +E+S+
Sbjct: 189 KSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVG 248
Query: 253 MITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+++ + + E + F V DV +T M+ + G +DEA + MP +
Sbjct: 249 VLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVE 308
Query: 308 NTVS-WNAMIAGYVQTKRMDMARELFEAM 335
VS W A++ ++A+ + E +
Sbjct: 309 PDVSVWGALLGACRIHGNTELAKRIAEHL 337
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 183/397 (46%), Gaps = 41/397 (10%)
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+ +M + DVV ++ YA+ G + A +FD+M E++ +WN ++ + QN +++A
Sbjct: 36 IIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKA 95
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQN 260
LF + +VVSW +++ G+ + ++ +F++M D ++++ A
Sbjct: 96 LKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADL 155
Query: 261 NYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
L E R F V+ D+ +A+V Y ++G +++A +FD MP++N VSWN++
Sbjct: 156 AAL-ELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSI 214
Query: 316 IAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQH-- 369
I G Q R + A LFE M N S+ +++ + +G + R F+ M Q+
Sbjct: 215 ITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYG 274
Query: 370 ---DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D + +I ++G +++ M + S + ++L C + EL K
Sbjct: 275 IVPDVSHYTCMIDLLGRAGCLDEAENFINGMPV---EPDVSVWGALLGACRIHGNTELAK 331
Query: 427 QLHGQLVKVGFE-AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI-----SW----- 475
++ L+ + + AG +V L +Y G ++A + + D+ V+ SW
Sbjct: 332 RIAEHLLGMEVQIAGIYV--LLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKT 389
Query: 476 --NTMIAGYARHGFGKDALMLFES----MKTVGIKPD 506
+ +AG H K+ ES MK G P+
Sbjct: 390 IMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPN 426
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/631 (40%), Positives = 375/631 (59%), Gaps = 44/631 (6%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
++ + Q R++EA +++L+ ++ ++L K + + +
Sbjct: 38 IIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPG 97
Query: 251 ----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
N +I YA+ L +AQ LF+E P KD+ +W M+SGY G++++AR +FD MP
Sbjct: 98 IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPH 157
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELF------EAMTCK---------------------- 338
++ SWNA+I+GYV A +LF E+ C
Sbjct: 158 RDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKE 217
Query: 339 ------------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ W ++ Y + G + AR +FD+M D +SW +I + G
Sbjct: 218 IHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGR 277
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
++ LF ++ G R N F VL+ CA+LA+ ++GK++HG + +VG++ F +A
Sbjct: 278 KKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASA 337
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ +Y KCG+ E A F ++ D++SW ++I GYA++G AL FES+ G KPD
Sbjct: 338 LVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPD 397
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+IT VG+LSAC+H GLV+ G EYF+S+ +G++ + HY C++DLL R+GR EA+N++
Sbjct: 398 EITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENII 457
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
NMP +PD W +LLG CR++G ELAE+AA+ +FE+EPEN Y+ LSN+YA +G W
Sbjct: 458 DNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWT 517
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+ +KVR M +RG+ K G SW+E++ +VH F VGDT HP+ I+ YL EL K+K++G
Sbjct: 518 EETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEG 577
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T VLHDV EE+KE + YHSEKLAVA+GI+S G PI+V KNLR C DCHNA+K
Sbjct: 578 YVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMK 637
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+ISKIV R II+RD+NRFH F GSCSC DY
Sbjct: 638 YISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 160/379 (42%), Gaps = 93/379 (24%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V N +I Y G L A+ +FD++PQ+DL SWN MISGY + AR LF+ MP R
Sbjct: 99 VISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR 158
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA-----------AYVQNGRI 201
D SWN ++SGY G+ A +F RM+++NE S + + ++ G+
Sbjct: 159 DNFSWNAVISGYVSQGWYMEALDLF-RMMQENESSNCNMFTLSSALAAAAAISSLRRGK- 216
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI------- 254
E L S + V W +L+ + K L +A+ IFD+M +D VSW TMI
Sbjct: 217 EIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDG 276
Query: 255 --------------TGYAQNNY-----LAEAQRLFEEAPVKDV-------------FTWT 282
+G N Y L L E K+V F +
Sbjct: 277 RKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAAS 336
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------- 335
A+V Y + G + AR +F+ MP + VSW ++I GY Q + DMA + FE++
Sbjct: 337 ALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKP 396
Query: 336 ----------TCKNVA-----------------------SWNTMITGYAQSGEITHARNL 362
C + + +I A+SG A N+
Sbjct: 397 DEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENI 456
Query: 363 FDRMP-QHDCISWAAIIAG 380
D MP + D WA+++ G
Sbjct: 457 IDNMPMKPDKFLWASLLGG 475
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 49/242 (20%)
Query: 388 EDSLRLFIEMKRYGER---LNRSP------FTSVLSTCANLASLELGKQLHGQLVKVGFE 438
E+ + LF + R E L+R P ++++++ C LELGK++H F
Sbjct: 36 EEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFI 95
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
G + N L+ MY KCGS+ +A F+EI KD+ SWNTMI+GYA G + A LF+ M
Sbjct: 96 PGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEM 155
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD---------------------- 536
D+ + ++S G + + F M +
Sbjct: 156 P----HRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISS 211
Query: 537 -------------YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
G+ + +T ++DL G+ G L+EA+ + M + D +W ++
Sbjct: 212 LRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMA-DKDIVSWTTMIH 270
Query: 584 AC 585
C
Sbjct: 271 RC 272
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 297/845 (35%), Positives = 431/845 (51%), Gaps = 126/845 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI N+ I +++ A VF MPRR +S+N++IS Y G A Q+F++M
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 120 ---------------------------------------QRDLVSWNVMISGYVRNKSLS 140
QRD N ++S Y + L
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AR +F + RDVVS+NTML YAQ Y +F +M + +++++ LL A+
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240
Query: 197 QNGRIEEAC----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
++E + E N ++ +L+ V+ + AK F + RD V +N
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNA 300
Query: 253 MITGYAQNNYLAEA---------------------------------------QRLFEEA 273
+I AQ+ + EA + E+
Sbjct: 301 LIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
DV A++S Y + G + +AR +F MP+++ +SWNA+IAGY + + A L++
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYK 420
Query: 334 AM-----------------TCKNVASW----------------------NTMITGYAQSG 354
M C N +++ N ++ Y + G
Sbjct: 421 QMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCG 480
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ A+N+F+ D ISW ++IAG+AQ G E + +LF EM+ + F SVLS
Sbjct: 481 SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
C N +LELGKQ+HG++ + G + +GNAL+ MY +CGS+++A + F + +DV+S
Sbjct: 541 GCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMS 600
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDD-ITMVGILSACSHTGLVEKGTEYFYSM 533
W MI G A G A+ LF M+ G +P D T ILSAC+H GLV +G + F SM
Sbjct: 601 WTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSM 660
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+YGV+P +HY C+V LLGRA R EA+ L+ MPF PDAA W LLGACR++G L
Sbjct: 661 ESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIAL 720
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
AE AA ++ N +Y+LLSN+YAA+GRW DV+K+R M RG++K G SW+EV N
Sbjct: 721 AEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDN 780
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+H F D HPE IYA L+ L ++++ G+ T+ VLHD+G+ +E L HSE+
Sbjct: 781 IIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSER 840
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+AYG++ P G PIR+ KNLR+C DCH A K ISK+VGR II RD+NRFH F G CS
Sbjct: 841 LAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCS 900
Query: 774 CGDYW 778
C DYW
Sbjct: 901 CEDYW 905
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/604 (28%), Positives = 288/604 (47%), Gaps = 95/604 (15%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMM 149
+Y A++ L A+++ QM + D+ N++I+ YV+ +S+ A +F+ M
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA- 204
P+RDV+SWN+++S YAQ G+ A ++F+ M N+I++ +L A +E
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 205 ---CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ ++ + NSL+ + K L A+ +F + RD VS+NTM+ YAQ
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 262 YLAEAQRLF---------------------------------------EEAPVKDVFTWT 282
Y+ E LF EE D+ T
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA- 341
A+V+ V+ G VD A+ F + +++ V +NA+IA Q A E + M VA
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 342 --------------------------------------SWNTMITGYAQSGEITHARNLF 363
N +I+ YA+ G++ AR LF
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
MP+ D ISW AIIAGYA+ +++RL+ +M+ G + R F +LS CAN ++
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYA 448
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
GK +H +++ G ++ + NAL+ MY +CGS+ EA + FE +DVISWN+MIAG+A
Sbjct: 449 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHA 508
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+HG + A LF+ M+ ++PD+IT +LS C + +E G + + + G+ +
Sbjct: 509 QHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ-IHGRITESGLQLDV 567
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
++++ R G L +A+N+ ++ D +W A++G C G+ KA E+ ++
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGCADQGED---MKAIELFWQ 623
Query: 604 MEPE 607
M+ E
Sbjct: 624 MQNE 627
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 155/288 (53%), Gaps = 6/288 (2%)
Query: 306 EKNTVSWNAMIAGYVQTKRMDMAR----ELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
E + ++ A++ + + + A+ ++ EA ++ N +I Y + + A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+F MP+ D ISW ++I+ YAQ G+ + + +LF EM+ G N+ + S+L+ C + A
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
LE GK++H Q++K G++ V N+LL MY KCG + A F I +DV+S+NTM+
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA+ + K+ L LF M + GI PD +T + +L A + ++++G + + + G+
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEGLNS 262
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+ + T +V + R G +D A+ K + + D + AL+ A +G
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAALAQHG 309
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R+ + ++L C L K++H Q+V+ G F+ N L+ MY KC SV +A+ F
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+E+ +DVISWN++I+ YA+ GF K A LFE M+ G P+ IT + IL+AC +E
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + +S G + + ++ + G+ G L A+ + + D ++ +LG
Sbjct: 146 NGKK-IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS-PRDVVSYNTMLG- 202
Query: 585 CRLYGKTELAEKAAEVIFEMEPE 607
LY + ++ + +M E
Sbjct: 203 --LYAQKAYVKECLGLFGQMSSE 223
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/634 (40%), Positives = 372/634 (58%), Gaps = 44/634 (6%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N LL Y + G++ +A LF+ ++ SWN+L+ + K + + K FDRMP RD V
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 249 SWNTMITGYAQNNYLAEAQRLFE--------------------EAPVKD----------- 277
S+NT I G++ N+ E+ LF+ A + D
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSI 181
Query: 278 --------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
VF W A+ Y + G++++AR +FD + +KN VSWN MI+GY + + +
Sbjct: 182 IVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCI 241
Query: 330 ELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
L M + + +T+I Y Q G + AR +F + D + W A++ GYA++G
Sbjct: 242 GLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNG 301
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
ED+L LF EM + +SV+S+CA LASL G+ +HG+ + G V +
Sbjct: 302 REEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSS 361
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG +++A F + ++V+SWN MI G A++G KDAL LFE+M KP
Sbjct: 362 ALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKP 421
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D++T +GILSAC H +E+G EYF S+ +G+ P HY CMV+LLGR GR+++A L
Sbjct: 422 DNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVAL 481
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+KNM +PD W LL C G AE AA +FE++P A Y++LSN+YA+ GRW
Sbjct: 482 IKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRW 541
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
DV+ VR M+ + VKK G+SW+E+ N+VH F+ D HPE + IY L L KL+++
Sbjct: 542 KDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEE 601
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG-RPIRVMKNLRVCEDCHNA 744
GF +T LVLHDVGE+EK + +HSEKLA+A+G++ P G PIR++KN+R+C DCH
Sbjct: 602 GFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEF 661
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+K S+I+GR IILRD+NRFHHFS G CSC D W
Sbjct: 662 MKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 213/452 (47%), Gaps = 61/452 (13%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
S +N ++ Y G+L A+ +FD+M +RD+ SWN ++S Y ++ S+ + F+ MP
Sbjct: 58 SFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPF 117
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ------NGRI 201
RD VS+NT ++G++ N + +F RM E E + +L A Q +I
Sbjct: 118 RDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQI 177
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ ++ N V WN+L + K + A+W+FD + ++ VSWN MI+GYA+N
Sbjct: 178 HGSIIVRNFLGN--VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235
Query: 262 Y------LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
L RL P D T + +++ Y Q G+VDEAR +F EK+ V W AM
Sbjct: 236 QPEKCIGLLHQMRLSGHMP--DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAM 293
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCKNVASWN-------------- 344
+ GY + R + A LF M +C +AS +
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353
Query: 345 --------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+I Y++ G I AR++F+ MP + +SW A+I G AQ+G+ +D+L LF
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYCKCG 455
M + + + F +LS C + +E G++ + A +V + + G
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTG 473
Query: 456 SVEEAYHAFEEIV-DKDVISWNTMIAGYARHG 486
+E+A + + D D + W+T+++ + G
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 191/426 (44%), Gaps = 60/426 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI WN ++ + ++G + F+ MP R SVSYN I+G+ N + ++F +M
Sbjct: 88 DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
+ ++ WN + Y + +
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
AR LF+ + K+++VSWN M+SGYA+NG + + +M ++++ + ++AAY
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNT 252
Q GR++EA +F ++V W ++M G+ K R DA +F+ M + D + ++
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327
Query: 253 MITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+++ A+ L Q + ++ + ++ +A++ Y + G +D+AR +F+ MP +N
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS----GEITHARNLFD 364
VSWNAMI G Q A ELFE M + N G + I + FD
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFD 447
Query: 365 RMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+ ++ +A ++ ++G E ++ L M + L S S+ ST ++
Sbjct: 448 SITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDI 507
Query: 420 ASLELG 425
+ E+
Sbjct: 508 VNAEVA 513
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 280/723 (38%), Positives = 409/723 (56%), Gaps = 92/723 (12%)
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAY-----VQN 198
M KRD+VSW+ ++S YA N A A F MLE NE + G+ A +
Sbjct: 1 MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVK-QKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
G+I +L +V +L+ FVK L A +FDRMP R+ V+W MIT +
Sbjct: 61 GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120
Query: 258 AQNNYLAEAQRLFEE----APVKDVFTWTAMVSGY------------------------- 288
Q + +A LF + V D FT + +VS
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180
Query: 289 -------------VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM-ARELFEA 334
V +G VD+AR +FD MP N +SW A+I GYVQ+ D A ELF
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLE 240
Query: 335 MT-----------------CKNVAS-W---------------------NTMITGYAQSGE 355
M C N++ W N++I+ Y++ G
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ +AR FD + + + +S+ I+ YA+S SE++ LF E++ G +N F S+LS
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
+++ ++ G+Q+H +++K GF++ + NAL+ MY +CG++E A+ F E+ D +VISW
Sbjct: 361 ASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+MI G+A+HGF AL F M G+ P+++T + +LSACSH GL+ +G ++F SM
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKV 480
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
++G++P +HY C+VDLLGR+G L+EA L+ +MPF+ DA LGACR++G +L +
Sbjct: 481 EHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGK 540
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AAE+I E +P + Y+LLSNL+A++G+W +V+++R KM++R + K G SW+EV+NKV
Sbjct: 541 HAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKV 600
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F VGDT HP+ IY L++L K+K+ G++ ST VLHDV EE+KE L HSEK+A
Sbjct: 601 HKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIA 660
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
VAYG +S RPIRV KNLRVC DCH A K+ S + + I+LRD NRFHHF G+CSC
Sbjct: 661 VAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCN 720
Query: 776 DYW 778
DYW
Sbjct: 721 DYW 723
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 208/506 (41%), Gaps = 120/506 (23%)
Query: 83 VFNSMPRRSSVSYNAMISGYLL----------------------NGQLDPARQVFDQMPQ 120
VF + + ++S +I G+LL NG L+ A +VFD+MP
Sbjct: 48 VFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPD 107
Query: 121 RDLVSWNVMI---------------------SGYVRNKS--------------LSAARNL 145
R++V+W +MI SGYV ++ LS R
Sbjct: 108 RNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF 167
Query: 146 FEMMPKR----DVVSWNTMLSGYAQ---NGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
++ K DV +++ YA+ +G D AR++FDRM N +SW ++ YVQ+
Sbjct: 168 HCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQS 227
Query: 199 GRIE-EACMLF------ESKANWEVVS------------W-------------------- 219
G + EA LF + K N S W
Sbjct: 228 GGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCV 287
Query: 220 -NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----AP 274
NSL+ + + + +A+ FD + ++ VS+NT++ YA++ EA LF E
Sbjct: 288 GNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGT 347
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGYVQTKRMDMARE 330
+ FT+ +++SG G + + I + + S NA+I+ Y + ++ A +
Sbjct: 348 GVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQ 407
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGY 386
+F M NV SW +MITG+A+ G T A F +M + +++ A+++ + G
Sbjct: 408 VFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGL 467
Query: 387 SEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ L+ F MK +G + V+ LE +L + F+A V
Sbjct: 468 ISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSM---PFKADALVLR 524
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKD 471
L G+++ HA E I+++D
Sbjct: 525 TFLGACRVHGNMDLGKHAAEMILEQD 550
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 133/305 (43%), Gaps = 57/305 (18%)
Query: 60 DIRQWNVAITTHMRNGCCD-SALHVFNSMP------------------------------ 88
++ W IT ++++G CD A+ +F M
Sbjct: 213 NVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQV 272
Query: 89 -------RRSSVSY--NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
R +S++ N++IS Y G ++ AR+ FD + +++LVS+N +++ Y ++ +
Sbjct: 273 YALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNS 332
Query: 140 SAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS----WNGL 191
A LF + + ++ ++LSG + G +I R+L+ S N L
Sbjct: 333 EEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNAL 392
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDE 247
++ Y + G IE A +F + V+SW S++ GF K A F +M +E
Sbjct: 393 ISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNE 452
Query: 248 VSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
V++ +++ + ++E + F E V + + +V ++G ++EA + +
Sbjct: 453 VTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVN 512
Query: 303 AMPEK 307
+MP K
Sbjct: 513 SMPFK 517
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/737 (36%), Positives = 417/737 (56%), Gaps = 55/737 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY-------------VRNKSLSAA 142
NA+I Y LD AR+VF++MP RD+VSWN +ISGY R ++L
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272
Query: 143 RNLFEMMP--------------------------KRDVVSWNTMLSGYAQ-NGYADAARR 175
+ + M K+DV+ N +LS Y + NG D RR
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDG-RR 331
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW---EVVSWNSLMGGFVKQKRL 232
IFD+M+ ++ +SWN ++ Y Q G EE+ LF N ++++ S++ L
Sbjct: 332 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDL 391
Query: 233 GDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
K++ D M D + N +I YA+ L +Q +F KD +W +M++ Y
Sbjct: 392 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 451
Query: 289 VQNGKVDEARMIFDAMP---EKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVA 341
+QNG DEA +F M + ++V++ +++ Q + + +EL + N+
Sbjct: 452 IQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIV 511
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
NT++ YA+ GE+ + +F+ M D I+W IIA S LR+ M+ G
Sbjct: 512 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 571
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ + S+L C+ LA+ GK++HG + K+G E+ VGN L+ MY KCGS+ ++
Sbjct: 572 VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSF 631
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + KDV++W +I+ +G GK A+ F M+ GI PD + V I+ ACSH+G
Sbjct: 632 QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 691
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE+G YF+ M +DY + P +HY C+VDLL R+ LD+A++ + +MP +PD++ WGAL
Sbjct: 692 LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 751
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
L ACR+ G TE+A++ +E I E+ P++ G YVL+SN+YAA G+W V +R ++ RG+K
Sbjct: 752 LSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLK 811
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G SW+E+QNKV+ F G + + + L L + ++G++ + + VLHD+ E+
Sbjct: 812 KDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDED 871
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EK +L HSE+LA+A+G+L+ G P++VMKNLRVCEDCH K+ISKI R +++RD
Sbjct: 872 EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDA 931
Query: 762 NRFHHFSGGSCSCGDYW 778
NRFH F G+CSCGDYW
Sbjct: 932 NRFHVFKDGACSCGDYW 948
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 243/564 (43%), Gaps = 94/564 (16%)
Query: 129 MISGYVRNKSLSAARNLFEMM-PKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEK 183
+I+ Y + +++ ++F + P +V WN+++ NG A ++ L+
Sbjct: 113 LIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQP 172
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIF 239
+ ++ ++ A E A + + ++ N+L+ + + L A+ +F
Sbjct: 173 DTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVF 232
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----------------------------E 271
+ MP+RD VSWN++I+GY N Y EA ++ E
Sbjct: 233 EEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVE 292
Query: 272 EAPV-----------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
E + KDV ++S Y + + + R IFD M ++ VSWN MI GY
Sbjct: 293 EGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYS 352
Query: 321 QTKRMDMARELFEAMT---------------------------------------CKNVA 341
Q + + +LF M C A
Sbjct: 353 QVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 412
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
S N +I YA+ G + ++ +F M D +SW ++I Y Q+G +++++LF +M +
Sbjct: 413 S-NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTD 470
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ + + +LS L L LGK+LH L K+GF + V N L+ MY KCG + ++
Sbjct: 471 VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSL 530
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
FE + +D+I+WNT+IA L + M+T G+ PD TM+ IL CS
Sbjct: 531 KVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLA 590
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+G E + + G+ + ++++ + G L + + K M D TW AL
Sbjct: 591 AKRQGKEIHGCIFK-LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTAL 648
Query: 582 LGACRLYGKTELAEKAAEVIFEME 605
+ AC +YG+ +KA EME
Sbjct: 649 ISACGMYGE---GKKAVRAFGEME 669
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 188/410 (45%), Gaps = 44/410 (10%)
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMA 328
+P +V+ W +++ NG EA ++ + +T ++ ++I +MA
Sbjct: 134 SPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 193
Query: 329 RELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ + + + S N +I Y + ++ AR +F+ MP D +SW ++I+GY +
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 253
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
GY ++L ++ + G + +SVL C L S+E G +HG + K+G + V
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
N LL MYCK + + F+++V +D +SWNTMI GY++ G ++++ LF M K
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFK 372
Query: 505 PDDITMVGILSACSHTGLVEKG------------------TEYFYSMNRDYGVI------ 540
PD +T+ IL AC H G +E G + +M G +
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 541 ------PNSKHYTCMVDLLGRAGRLDEAQNLMKNMP--FEPDAATWGALLGACRLYGKTE 592
+S + M+++ + G DEA L K M +PD+ T+ LL G
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLX 492
Query: 593 LAEKAAEVIFEMEPENAGMYV--LLSNLYAASGRWGDVSKVRLKMRDRGV 640
L ++ + +M N+ + V L ++YA G GD KV M+ R +
Sbjct: 493 LGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 541
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 148/284 (52%), Gaps = 6/284 (2%)
Query: 346 MITGYAQSGEITHARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+I YA + T + ++F P ++ W +II +G ++L L+ E +R +
Sbjct: 113 LIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQP 172
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ F SV++ CA L E+ K +H +++ +GF + ++GNAL+ MYC+ +++A F
Sbjct: 173 DTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVF 232
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
EE+ +DV+SWN++I+GY +G+ +AL ++ + +G+ PD TM +L AC G VE
Sbjct: 233 EEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVE 292
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + + + G+ + ++ + + L + + + M DA +W ++
Sbjct: 293 EG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR-DAVSWNTMICG 350
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
Y + L E++ ++ EM + + ++++ A G GD+
Sbjct: 351 ---YSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDL 391
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 296/839 (35%), Positives = 448/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA------------- 111
N+ I + + G A VF + R +VS+ AM+SGY NG + A
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 112 --------------------------RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNL 145
QV+ Q + V N +I+ Y+R SLS A +
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV 200
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRI 201
F MP D V++NT++S +AQ G ++A IF+ M + ++ LLAA G +
Sbjct: 201 FSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDL 260
Query: 202 EEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ L ++ + + + SL+ +VK + +A IF + V WN M+ Y
Sbjct: 261 NKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAY 320
Query: 258 AQNNYLAEAQRLFEEAPVKDV----FTWTAM----------------------------- 284
Q + LA++ LF + V FT+ +
Sbjct: 321 GQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDM 380
Query: 285 -VSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--- 335
VSG Y + G +D+AR I + + K+ VSW +MIAGYVQ + A E F+ M
Sbjct: 381 YVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLF 440
Query: 336 --------------TCK----------------------NVASWNTMITGYAQSGEITHA 359
C +V+ WN ++ YA+ G A
Sbjct: 441 GIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEA 500
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+LF+ + D I+W +++G+AQSG E++L +FI+M + G + N F S +S ANL
Sbjct: 501 FSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANL 560
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A ++ GKQ+H ++K G + V NAL+ +Y KCGS+E+A F E+ +++ +SWNT+I
Sbjct: 561 ADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTII 620
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
++HG+G +AL LF+ MK G+KP+D+T +G+L+ACSH GLVE+G YF SM+ ++G+
Sbjct: 621 TSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGI 680
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P HY C+VD+LGRAG+LD A+ ++ MP +A W LL ACR++ E+ E AA+
Sbjct: 681 HPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAK 740
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP ++ YVLLSN YA +G+W VR M+DRGV+K G SW+EV+N VH F
Sbjct: 741 YLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFF 800
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP +IY YL +L+ +L + G++ + H+ +E+K+ HSEKLAVA+G
Sbjct: 801 VGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFG 860
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S+P P+RV+KNLRVC DCH +K S+++GR I+LRD RFHHF+ G+CSCGD+W
Sbjct: 861 LMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 252/555 (45%), Gaps = 90/555 (16%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D ++ N++I Y + + AR +FE + RD VSW MLSGYA+NG + A ++ +M
Sbjct: 76 DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMH 135
Query: 182 EKNEISWNGLL---------AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
+ +L AA + GR+ A +++ + E V N+L+ +++ L
Sbjct: 136 CSGVVPTPYVLSSVLSACTKAALFEQGRLVHA-QVYKQGSCSETVVGNALIALYLRFGSL 194
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSG- 287
A+ +F MP D V++NT+I+ +AQ A +FEE + D T ++++
Sbjct: 195 SLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAAC 254
Query: 288 ----------------------------------YVQNGKVDEARMIFDAMPEKNTVSWN 313
YV+ G + EA IF + N V WN
Sbjct: 255 ASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWN 314
Query: 314 AMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN------------ 344
M+ Y Q + + +LF M TC N
Sbjct: 315 LMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKT 374
Query: 345 ----------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+I Y++ G + AR + + + D +SW ++IAGY Q + +++L F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+M+ +G + S +S CA + ++ G+Q+H ++ G+ A + NAL+ +Y +C
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARC 494
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G +EA+ FE I KD I+WN M++G+A+ G ++AL +F M G+K + T V +
Sbjct: 495 GRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSI 554
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
SA ++ +++G + ++ + G ++ ++ L G+ G +++A+ M E +
Sbjct: 555 SASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKMQFFEMS-ERN 612
Query: 575 AATWGALLGACRLYG 589
+W ++ +C +G
Sbjct: 613 HVSWNTIITSCSQHG 627
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 214/472 (45%), Gaps = 54/472 (11%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L ++ I+ N L+ Y + G ++ A +FE + + VSW +++ G+ + +A ++
Sbjct: 73 LGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYH 132
Query: 241 RMPVRDEVSWNTMIT---------GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
+M V +++ + L AQ ++++ + A+++ Y++
Sbjct: 133 QMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQ-VYKQGSCSETVVGNALIALYLRF 191
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------------- 335
G + A +F MP + V++N +I+ + Q + A E+FE M
Sbjct: 192 GSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLL 251
Query: 336 -TCKNVASWN----------------------TMITGYAQSGEITHARNLFDRMPQHDCI 372
C ++ N +++ Y + G I A +F + + +
Sbjct: 252 AACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVV 311
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
W ++ Y Q S LF +M G R N + +L TC + LG+Q+H
Sbjct: 312 LWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLS 371
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
+K GFE+ +V L+ MY K G +++A E + KDV+SW +MIAGY +H F K+AL
Sbjct: 372 IKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEAL 431
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
F+ M+ GI PD+I + +SAC+ + +G + +S G + + +V+L
Sbjct: 432 ETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQ-IHSRVYVSGYSADVSIWNALVNL 490
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
R GR EA +L + + + D TW ++ + ++ L E+A EV +M
Sbjct: 491 YARCGRSKEAFSLFEAIEHK-DKITWNGMVSG---FAQSGLYEEALEVFIKM 538
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 201/415 (48%), Gaps = 25/415 (6%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D ++ N +I YA+ + A+R+FE+ +D +W AM+SGY +NG +EA ++ M
Sbjct: 76 DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMH 135
Query: 306 EKNTVS----WNAMIAGYVQTKRMDMAR----ELFEAMTCKNVASWNTMITGYAQSGEIT 357
V +++++ + + R ++++ +C N +I Y + G ++
Sbjct: 136 CSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLS 195
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F MP D +++ +I+ +AQ G E +L +F EM+ G + S+L+ CA
Sbjct: 196 LAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACA 255
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
++ L GKQLH L+K G + +LL +Y KCG + EA F+ +V+ WN
Sbjct: 256 SIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNL 315
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
M+ Y + + LF M G++P++ T +L C++ G + G E + ++
Sbjct: 316 MLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG-EQIHLLSIKT 374
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G + ++D+ + G LD+A+ +++ + D +W +++ Y + E ++A
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLE-AKDVVSWTSMIAG---YVQHEFCKEA 430
Query: 598 AEVIFEME-----PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
E +M+ P+N G L S + A +G + +R + V+GYS
Sbjct: 431 LETFKDMQLFGIWPDNIG---LASAISACAG----IKAMRQGQQIHSRVYVSGYS 478
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 150/275 (54%), Gaps = 8/275 (2%)
Query: 333 EAMTC---KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+A+TC ++ + N +I YA+ G + AR +F+++ D +SW A+++GYA++G E+
Sbjct: 67 KAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEE 126
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
++ L+ +M G +SVLS C A E G+ +H Q+ K G + VGNAL+
Sbjct: 127 AVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIA 186
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
+Y + GS+ A F E+ D +++NT+I+ +A+ G G+ AL +FE M+ G PD +T
Sbjct: 187 LYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVT 246
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ +L+AC+ G + KG + +S G+ P+ ++DL + G + EA + K+
Sbjct: 247 IASLLAACASIGDLNKGKQ-LHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ W +L A YG+ K+ ++ +M
Sbjct: 306 D-RTNVVLWNLMLVA---YGQISDLAKSFDLFCQM 336
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 7/255 (2%)
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-ANLASLELGKQLHGQLVKVG 436
+ G+ E L LF R L F L C ++ L +H + + G
Sbjct: 13 LTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCG 72
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
GN L+ +Y K G V+ A FE++ +D +SW M++GYAR+G G++A+ L+
Sbjct: 73 LGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYH 132
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M G+ P + +LSAC+ L E+G ++ G + ++ L R
Sbjct: 133 QMHCSGVVPTPYVLSSVLSACTKAALFEQG-RLVHAQVYKQGSCSETVVGNALIALYLRF 191
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN-AGMYVLL 615
G L A+ + MP+ D T+ L+ + + E A E+ EM V +
Sbjct: 192 GSLSLAERVFSEMPY-CDRVTFNTLISR---HAQCGNGESALEIFEEMRLSGWTPDCVTI 247
Query: 616 SNLYAASGRWGDVSK 630
++L AA GD++K
Sbjct: 248 ASLLAACASIGDLNK 262
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/634 (40%), Positives = 372/634 (58%), Gaps = 44/634 (6%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N LL Y + G++ +A LF+ + SWN+L+ + K + + K FDRMP RD V
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 249 SWNTMITGYAQNNYLAEAQRLFEE------APVK-------------------------- 276
S+NT I G++ N+ E+ LF+ P +
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSI 181
Query: 277 -------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+VF W A+ Y + G++++AR +FD + +KN VSWN MI+GY + + +
Sbjct: 182 IVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCI 241
Query: 330 ELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
L M + + +T+I Y Q G + AR +F + D + W A++ GYA++G
Sbjct: 242 GLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNG 301
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
ED+L LF EM + +SV+S+CA LASL G+ +HG+ + G V +
Sbjct: 302 REEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSS 361
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG +++A F + ++V+SWN MI G A++G KDAL LFE+M KP
Sbjct: 362 ALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKP 421
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D++T +GILSAC H +E+G EYF S++ +G+ P HY CMV+LLGR GR+++A L
Sbjct: 422 DNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVAL 481
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+KNM +PD W LL C G AE AA +FE++P A Y++LSN+YA+ GRW
Sbjct: 482 IKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRW 541
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
DV+ VR M+ + VKK G+SW+E+ N+VH F+ D HPE + IY L L KL+++
Sbjct: 542 KDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEE 601
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG-RPIRVMKNLRVCEDCHNA 744
GF +T LVLHDVGE+EK + +HSEKLA+A+G++ P G PIR++KN+R+C DCH
Sbjct: 602 GFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEF 661
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+K S+I+GR IILRD+NRFHHFS G CSC D W
Sbjct: 662 MKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 73/458 (15%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
S +N ++ Y G+L A+ +FD+M +RD SWN ++S Y ++ S+ + F+ MP
Sbjct: 58 SFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPF 117
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ------NGRI 201
RD VS+NT ++G++ N + +F RM E E + +L A Q +I
Sbjct: 118 RDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQI 177
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ ++ N V WN+L + K + A+W+FD + ++ VSWN MI+GYA+N
Sbjct: 178 HGSIIVRNFLGN--VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235
Query: 262 Y------LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
L RL P D T + +++ Y Q G+VDEAR +F EK+ V W AM
Sbjct: 236 QPEKCIGLLHQMRLSGHMP--DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAM 293
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCKNVASWN-------------- 344
+ GY + R + A LF M +C +AS +
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353
Query: 345 --------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+I Y++ G I AR++F+ MP + +SW A+I G AQ+G+ +D+L LF
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQL-------HGQLVKVGFEAGCFVGNALLV 449
M + + + F +LS C + +E G++ HG + A C V
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYA-CMVN----- 467
Query: 450 MYCKCGSVEEAYHAFEEIV-DKDVISWNTMIAGYARHG 486
+ + G +E+A + + D D + W+T+++ + G
Sbjct: 468 LLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 190/426 (44%), Gaps = 60/426 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN ++ + ++G + F+ MP R SVSYN I+G+ N + ++F +M
Sbjct: 88 DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
+ ++ WN + Y + +
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
AR LF+ + K+++VSWN M+SGYA+NG + + +M ++++ + ++AAY
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNT 252
Q GR++EA +F ++V W ++M G+ K R DA +F+ M + D + ++
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327
Query: 253 MITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+++ A+ L Q + ++ + ++ +A++ Y + G +D+AR +F+ MP +N
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS----GEITHARNLFD 364
VSWNAMI G Q A ELFE M + N G + I + FD
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFD 447
Query: 365 RMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+ ++ +A ++ ++G E ++ L M + L S S+ ST ++
Sbjct: 448 SISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDI 507
Query: 420 ASLELG 425
+ E+
Sbjct: 508 VNAEVA 513
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 299/771 (38%), Positives = 440/771 (57%), Gaps = 57/771 (7%)
Query: 51 NKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP 110
N K D D+ N I ++R G C SA +F+ MP R+ V++ +ISGY NG +
Sbjct: 25 NVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPED 84
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSL--SAARNLFEMMPKR---------------- 152
A V +M + G++ N+ SA R E M R
Sbjct: 85 ACGVLKEM----------IFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLN 134
Query: 153 --DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
V N +++ YA+ G D AR +F M++K+ +SWN ++ QN E+A + S
Sbjct: 135 DAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNS 194
Query: 211 -------KANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+N+ ++S SL + Q+ G+ + M V VS NT++ YA+
Sbjct: 195 MRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDV--SVS-NTLLALYAE 251
Query: 260 NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG-KVDEARMIFDAMPEK----NTVSWNA 314
+ LAE Q++F +D +W ++ +G V EA +F M N V++
Sbjct: 252 TSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFIN 311
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQH- 369
++A ++ ++ + NV A N ++ Y +SGE+ + +F RM +
Sbjct: 312 LLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERR 371
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D +SW ++I+GY + ++ L M + G+RL+ F +VLS CA +A+LE G ++H
Sbjct: 372 DEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVH 431
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
++ E+ +G+AL+ MY KCG ++ A F + +++ SWN+MI+GYARHG G
Sbjct: 432 ACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGD 491
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+AL LF MK G PD IT VG+LSACSH GLV++G EYF SM YG++P +HY+CM
Sbjct: 492 NALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCM 551
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA-CRLYG-KTELAEKAAEVIFEMEPE 607
VDLLGRAG LD+ +N + MP +P+ W +LGA CR G KTEL +AAE++F M+P+
Sbjct: 552 VDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQ 611
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
NA YVLLSN+YA+ G+W D+++ R MR+ VKK G SW+ +++ VH F GD HPE
Sbjct: 612 NAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPE 671
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
K IYA L+EL+ K++ G+V K L+D+ E KE +L YHSEKLAVA+ +L+ +G
Sbjct: 672 KGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGL 730
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PIR+MKNLRVC DCH+A K+ISK+V R I+LRD+NRFHHF G CSC DYW
Sbjct: 731 PIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
H ++K GF++ F+ N L+ +Y + G A F+E+ D++ ++W +I+GY ++G
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK------GTEYFYSMNRDYGVIP 541
+DA + + M G P+ + AC + L + G +N +
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
N ++++ + G +D A+++ M + D+ +W +++
Sbjct: 142 NG-----LINMYAKCGDIDHARSVFGLM-VDKDSVSWNSMI 176
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/695 (39%), Positives = 403/695 (57%), Gaps = 22/695 (3%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA-RNLFEMMPKRDVVSWNTM--- 160
+G+L AR VF +MP+RD VSW VM+ G R A + L +M + T+
Sbjct: 5 SGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNV 64
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISW----NGLLAAYVQNGRIEEACMLFESKANWEV 216
LS A R++ +++ S N +L Y + G E A +FE V
Sbjct: 65 LSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSV 124
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-----E 271
SWN+++ R+ A+ +F+ MP R VSWN MI GY QN A+A +LF E
Sbjct: 125 SSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHE 184
Query: 272 EAPVKDVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+ D FT T+++S G V+ GK A ++ M + V+ NA+I+ Y ++ ++
Sbjct: 185 SSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT-NALISTYAKSGSVE 243
Query: 327 MARELFEAM--TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
AR + + T NV S+ ++ GY + G++ AR +F M D ++W A+I GY Q+
Sbjct: 244 NARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQN 303
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G +++++ LF M G N +VLS CA+LA L+ GKQ+H + ++ E V
Sbjct: 304 GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVS 363
Query: 445 NALLVMYCKCGSVEEAYHAFEEIV-DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
NA++ MY + GS A F+++ K+ I+W +MI A+HG G++A+ LFE M G+
Sbjct: 364 NAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGV 423
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+PD IT VG+LSACSH G V +G Y+ + ++ + P HY CMVDLL RAG EAQ
Sbjct: 424 EPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQ 483
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
++ MP EPDA WG+LL ACR++ ELAE AAE + ++P N+G Y ++N+Y+A G
Sbjct: 484 EFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACG 543
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW D +++ +++ V+K TG+SW +++K+H F D +HP++D +YA + ++K
Sbjct: 544 RWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIK 603
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
GFV + VLHDV +E KE +L HSEKLA+A+G++S P +RVMKNLRVC DCH
Sbjct: 604 GAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHA 663
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK ISK+ R II+RD RFHHF G CSC DYW
Sbjct: 664 AIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 234/495 (47%), Gaps = 61/495 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N++++ Y G + A VF++MP R + SWN M+S + A +LFE MP R +V
Sbjct: 97 NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 156
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK-----NEISWNGLLAAYVQNGRI----EEACM 206
SWN M++GY QNG A ++F RML + +E + +L+A G + +
Sbjct: 157 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 216
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD--EVSWNTMITGYAQNNYLA 264
+ ++ + N+L+ + K + +A+ I D+ D +S+ ++ GY + +
Sbjct: 217 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 276
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYV 320
A+ +F +DV WTAM+ GY QNG+ DEA +F +M PE N+ + A+++
Sbjct: 277 SAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 336
Query: 321 QTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWA 375
+D +++ ++ ++ + N +IT YA+SG AR +FD++ + + I+W
Sbjct: 337 SLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 396
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++I AQ G E+++ LF EM R G +R + VLS C++ + GK+ + Q+
Sbjct: 397 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN- 455
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
E + ++ + M+ AR G +A
Sbjct: 456 -----------------------------EHQIAPEMSHYACMVDLLARAGLFSEAQ--- 483
Query: 496 ESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
E ++ + ++PD I +LSAC + L E E S++ + NS Y+ + ++
Sbjct: 484 EFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPN-----NSGAYSAIANV 538
Query: 553 LGRAGRLDEAQNLMK 567
GR +A + K
Sbjct: 539 YSACGRWSDAARIWK 553
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 181/441 (41%), Gaps = 103/441 (23%)
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTW 281
F K RL DA+ +F MP RD VSW M+ G + EA + + FT
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 282 TAMVSG-----------------------------------YVQNGKVDEARMIFDAMPE 306
T ++S Y + G + A +F+ MP
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
++ SWNAM++ RMD+A LFE+M +++ SWN MI GY Q+G A LF RM
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+S + D + TSVLS CANL ++ +GK
Sbjct: 182 LH--------------ESSMAPDEFTI----------------TSVLSACANLGNVRIGK 211
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD----------------- 469
Q+H +++ V NAL+ Y K GSVE A ++ ++
Sbjct: 212 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 271
Query: 470 ----------------KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
+DV++W MI GY ++G +A+ LF SM T G +P+ T+ +
Sbjct: 272 IGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAV 331
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
LS C+ ++ G + R + +S ++ + R+G A+ + + +
Sbjct: 332 LSVCASLACLDYGKQIHCRAIRSL-LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRK 390
Query: 574 DAATWGALLGACRLYGKTELA 594
+ TW +++ A +G+ E A
Sbjct: 391 ETITWTSMIVALAQHGQGEEA 411
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 159/379 (41%), Gaps = 82/379 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVS----------------------- 94
D I WN I + +NG AL +F+ M SS++
Sbjct: 152 DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 211
Query: 95 -----------------YNAMISGYLLNGQLDPARQVFDQMPQRDL--VSWNVMISGYVR 135
NA+IS Y +G ++ AR++ DQ + DL +S+ ++ GYV+
Sbjct: 212 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 271
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGL 191
+ +AR +F +M RDVV+W M+ GY QNG D A +F M+ E N + +
Sbjct: 272 IGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAV 331
Query: 192 LAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
L+ ++ C S N+++ + + A+ +FD++ R E
Sbjct: 332 LSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKE 391
Query: 248 -VSWNTMITGYAQNNYLAEAQRLFEE---APVK-DVFTWTAMVSGYVQNGKVDEARMIFD 302
++W +MI AQ+ EA LFEE A V+ D T+ ++S G V+E + +D
Sbjct: 392 TITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYD 451
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
+ ++ ++ ++ + M+ A++G + A+
Sbjct: 452 QIKNEHQIA--------------------------PEMSHYACMVDLLARAGLFSEAQEF 485
Query: 363 FDRMP-QHDCISWAAIIAG 380
RMP + D I+W ++++
Sbjct: 486 IRRMPVEPDAIAWGSLLSA 504
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
M+ K G + +A F E+ ++D +SW M+ G R G +A+ M G P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 510 MVGILSACSHT--GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+ +LS+C+ T G V + F +P + ++++ G+ G + A + +
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANS---VLNMYGKCGDSETATTVFE 117
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
MP ++W A++ G+ +LAE +FE P+ +
Sbjct: 118 RMPVR-SVSSWNAMVSLNTHLGRMDLAES----LFESMPDRS 154
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/583 (42%), Positives = 373/583 (63%), Gaps = 4/583 (0%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N IS L G++ AR+VFD+MP+RD VS+ MI+ Y++NK L A LF +P+R+VV
Sbjct: 55 NVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVV 114
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
+ + M+SGY + G D AR++FD+M+E+N SW L++ Y + G ++EA LF
Sbjct: 115 ADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKN 174
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
VVSW + + G+ + + +A+ IF++MP ++ ++W M+ Y +N+ + EA LF + P
Sbjct: 175 VVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQ 234
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+++++W M+SG + +++EA +F++MP++N VSW ++ G + M++AR+ F+ M
Sbjct: 235 RNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKYFDHM 294
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
K++A+WN MIT Y G + A NLF+ MP+ + +SW A+I GYA++G +SLR I
Sbjct: 295 PTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLI 354
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M R + N + TSVL+ C ++ LEL Q HG ++ +GFE + N L+ Y +CG
Sbjct: 355 LMLRSNFKPNETTITSVLTACDSI--LEL-MQAHGLVIHLGFEQDKVLANGLVTTYSRCG 411
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
V A F+++ KD++SW MI Y+ HG G AL +F M G KPD IT VG+LS
Sbjct: 412 DVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLS 471
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM-PFEPD 574
ACSH GLV+KG F SM+ YGV P ++HY+C+VD+LGRAG +++A ++ M P E D
Sbjct: 472 ACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECD 531
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
A GALLGACRL+ LA E + E EP ++G YVLL+N YAA G+W + ++VR +
Sbjct: 532 GAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFAEVRKE 591
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
M++R VKK G+S +EV+ K H F V D HP+ + IY +L+E
Sbjct: 592 MKERNVKKEPGFSQIEVKGKSHVFFVRDRSHPQLEEIYLFLDE 634
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 249/495 (50%), Gaps = 77/495 (15%)
Query: 1 MRGNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
M G+ R+L + Q + +NR S T P PSK T + P P D
Sbjct: 1 MSGSRLYRRLLNFPATFQSLRHLNRSFSSLKT-PNPSKITTR---------IPFPVFASD 50
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY------------------------- 95
+ NV I+ G A VF+ MPRR +VSY
Sbjct: 51 TYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPE 110
Query: 96 ------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
+AMISGY+ G+LD ARQVFDQM +R++ SW ++SGY + ++ A LF M
Sbjct: 111 RNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQM 170
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
P+++VVSW T + GYAQNG+ D AR IF++M EKN I+W ++ +YV+N I+EA LF
Sbjct: 171 PEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFY 230
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
+ SWN ++ G + RL +A +F+ MP R+EVSW T++TG A+N + A++
Sbjct: 231 QMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKY 290
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ-------- 321
F+ P KD+ W AM++ YV G + EA +F+ MPEKN VSWNA+I GY +
Sbjct: 291 FDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSL 350
Query: 322 ------------------TKRMDMARELFEAMTC----------KNVASWNTMITGYAQS 353
T + + E M ++ N ++T Y++
Sbjct: 351 RYLILMLRSNFKPNETTITSVLTACDSILELMQAHGLVIHLGFEQDKVLANGLVTTYSRC 410
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ AR +FD++ D +SW A+I Y+ G +L++F M R G + + F +L
Sbjct: 411 GDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLL 470
Query: 414 STCANLASLELGKQL 428
S C++ ++ G+ L
Sbjct: 471 SACSHAGLVKKGQML 485
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 157/321 (48%), Gaps = 35/321 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN+ I+ + + A+ +FNSMP+R+ VS+ +++G NG ++ AR+ FD MP
Sbjct: 236 NLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKYFDHMP 295
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+D+ +WN MI+ YV S++ A NLF +MP++++VSWN ++ GYA+NG + R
Sbjct: 296 TKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLIL 355
Query: 180 ML----EKNEISWNGLLAAYVQNGRIEEA-CMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
ML + NE + +L A + +A ++ + V N L+ + + +
Sbjct: 356 MLRSNFKPNETTITSVLTACDSILELMQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLS 415
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQN----NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
A++IFD++ ++D VSW MI Y+ + + L R+ D T+ ++S
Sbjct: 416 ARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSH 475
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
G V + +M+FD+M V A E +C ++
Sbjct: 476 AGLVKKGQMLFDSMSCAYGVEPRA------------------EHYSC--------LVDIL 509
Query: 351 AQSGEITHARNLFDRMPQHDC 371
++GE+ A + MP H+C
Sbjct: 510 GRAGEMNKAMKVVSEMPPHEC 530
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/649 (40%), Positives = 385/649 (59%), Gaps = 13/649 (2%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY 95
P + L R S + AGD + Q N AI H R G +A VF+ M R+ ++
Sbjct: 11 PFRCLLLRRFCSLGPPQRHAAGD--VFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTW 68
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N M+SG + N L AR+VFD MP R+ VSW +++GY R ++ AR LF +P R+VV
Sbjct: 69 NCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVV 128
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
SWN M+SGYA+NG AR +FD M ++++SW +++ Y++ + EA LF+S +
Sbjct: 129 SWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVREARELFDSMPSPP 188
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
N+L+ G+V+ + A+ +F +M R+ VSWN MITGYA+ + AQRLF+E P
Sbjct: 189 TSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPE 248
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
KDV + TA++ GY+QNG VD A +F MP ++TV+WN M+ G+V+ R+D A +LF M
Sbjct: 249 KDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEM 308
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++ SWN ++ GY Q G++ A F R P D ISW +I+GY G +L L
Sbjct: 309 PDRDQISWNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKDEG----ALSLLS 364
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM R G + +++ + V+S CA+L SL GK +H +K GFE V ++L+ MY KCG
Sbjct: 365 EMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCG 424
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ EA FE I+ +D ++WN MIA YA HG +AL +F+ M G +PD T + ILS
Sbjct: 425 LISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILS 484
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H G + +G +F SM D+ ++P S HY+CMVDLLGR+G + +A + + +P +
Sbjct: 485 ACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRT 544
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W L C +G+ +L E A + + P + GMY LLSN+YAA W + VR M
Sbjct: 545 TAWETLFSVCNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFM 604
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP-------EKDRIYAYLEE 677
++RG+KK TG SW+E++ +V TFS D+ HP E D I +EE
Sbjct: 605 KERGLKKETGCSWIELKGEVVTFSSNDSNHPLIEQICQEVDSISVMIEE 653
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/636 (40%), Positives = 382/636 (60%), Gaps = 6/636 (0%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY 95
P + L R S + AGD + Q N AI H R G +A VF+ M R+ ++
Sbjct: 11 PFRCLLLRRFCSLGPPQRHAAGD--VFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTW 68
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N M+SG + N L AR+VFD MP R+ VSW +++GY R ++ AR LF +P R+VV
Sbjct: 69 NCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVV 128
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
SWN M+SGYA+NG AR +FD M ++++SW +++ Y++ + EA LF+S +
Sbjct: 129 SWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVREARELFDSMPSPP 188
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
N+L+ G+V+ + A+ +F +M R+ VSWN MITGYA+ + AQRLF+E P
Sbjct: 189 TSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPE 248
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
KDV + TA++ GY+QNG VD A +F MP ++TV+WN M+ G+V+ R+D A +LF M
Sbjct: 249 KDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEM 308
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++ SWN ++ GY Q G++ A F R P D ISW +I+GY G +L L
Sbjct: 309 PDRDQISWNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKDEG----ALSLLS 364
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM R G + +++ + V+S CA+L SL GK +H +K GFE V ++L+ MY KCG
Sbjct: 365 EMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCG 424
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ EA FE I+ +D ++WN MIA YA HG +AL +F+ M G +PD T + ILS
Sbjct: 425 LISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILS 484
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H G + +G +F SM D+ ++P S HY+CMVDLLGR+G + +A + + +P +
Sbjct: 485 ACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRT 544
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W L C +G+ +L E A + + P + GMY LLSN+YAA W + VR M
Sbjct: 545 TAWETLFSVCNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFM 604
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
++RG+KK TG SW+E++ +V TFS D+ HP ++I
Sbjct: 605 KERGLKKETGCSWIELKGEVVTFSSNDSNHPLIEQI 640
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 283/785 (36%), Positives = 439/785 (55%), Gaps = 86/785 (10%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
++H + S N +++ +GQ++ AR++FD+MPQ+D SWN MIS YV L
Sbjct: 53 SIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRL 112
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LE---KNEISWNGLLAAY 195
AR LF+ + ++W++++SGY + G A +F M LE ++ + +L
Sbjct: 113 VEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVC 172
Query: 196 VQNGRIEEACML--FESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPV--RDEVS 249
G I+ M+ F K +E V L+ + K K + +A+++F + ++ V
Sbjct: 173 SSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVL 232
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVK--------------------------------- 276
W M+TGYAQN +A F +
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292
Query: 277 ------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+V+ +A+V Y + G + A+ + + M + + VSWN+++ G+V+ + A
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352
Query: 331 LFEAM----------------TCKNVASWN---------------------TMITGYAQS 353
LF+ M C V S N ++ YA++
Sbjct: 353 LFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKT 412
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ A +F++M + D ISW +++ GYAQ+ E+SL++F +M+ G ++ S+L
Sbjct: 413 GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASIL 472
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S CA L LE GKQ+H +K G V N+L+ MY KCG +++A F + KDVI
Sbjct: 473 SACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVI 532
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
+W +I GYA++G G+++L +++M + G +PD IT +G+L ACSH GLV++G +YF M
Sbjct: 533 TWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQM 592
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
N+ YG+ P +HY CM+DL GR+G+LDEA+ L+ M +PDA W +LL ACR++ EL
Sbjct: 593 NKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLEL 652
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
AE+AA +FE+EP NA YV+LSN+Y+AS +W DV+K+R M+ +G+ K G SWLE+ +
Sbjct: 653 AERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINS 712
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+V+TF D HP + IY ++E+ ++K+ G+V LHD+ +E KE L YHSEK
Sbjct: 713 RVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEK 772
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LAVA+G+L+ P PIR+ KNLRVC DCH+A+K+IS++ R IILRD+N FHHF G CS
Sbjct: 773 LAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECS 832
Query: 774 CGDYW 778
CGDYW
Sbjct: 833 CGDYW 837
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 159/353 (45%), Gaps = 40/353 (11%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY----LL 104
++N + D D+ WN + +R+G + AL +F +M R N I Y +L
Sbjct: 319 AKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGR-----NMKIDDYTFPSVL 373
Query: 105 N----GQLDPARQ----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
N G ++P + LVS N ++ Y + + A +FE M ++DV+S
Sbjct: 374 NCCVVGSINPKSVHGLIIKTGFENYKLVS-NALVDMYAKTGDMDCAYTVFEKMLEKDVIS 432
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML----F 208
W ++++GYAQN + + +IF M + ++ +L+A + +E +
Sbjct: 433 WTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFI 492
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN----NYLA 264
+S W +NSL+ + K L DA IF M V+D ++W +I GYAQN N L
Sbjct: 493 KSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLK 552
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGY 319
+ D T+ ++ G VDE R F M + + + MI +
Sbjct: 553 FYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLF 612
Query: 320 VQTKRMDMARELFEAMTCKNVAS-WNTMITG--YAQSGEITH--ARNLFDRMP 367
++ ++D A++L + M K A+ W ++++ ++ E+ A NLF+ P
Sbjct: 613 GRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEP 665
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/750 (37%), Positives = 420/750 (56%), Gaps = 106/750 (14%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
++Q+FD+ PQ+ L N ++ + RN A NLF + + + + LS +
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLK---- 100
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
+FDR++ K ++ + +V+ +V SL+ ++K +
Sbjct: 101 -VCGCLFDRIVGK-QVHCQCIKCGFVE-----------------DVSVGTSLVDMYMKTE 141
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVS 286
+ D + +FD M V++ VSW +++ GY QN +A +LF + ++ + FT+ A++
Sbjct: 142 SVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLG 201
Query: 287 GYVQNGKVD-----------------------------------EARMIFDAMPEKNTVS 311
G +G V+ +A+ +FD+M +N VS
Sbjct: 202 GLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVS 261
Query: 312 WNAMIAGYVQTKRMDM-ARELFEAM-----------------TCKNVASWN--------- 344
WN+MIAG+V T +D+ A ELF M C N+ +
Sbjct: 262 WNSMIAGFV-TNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQV 320
Query: 345 -------------TMITGYAQSGEITHARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDS 390
++ Y++ EI A LF M + +SW AII+GY Q+G ++ +
Sbjct: 321 IKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRA 380
Query: 391 LRLFIEMKRY-GERLNRSPFTSVLSTCAN-LASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ LF +M+R G N F+SVL+ CA AS+E GKQ H +K GF V +AL+
Sbjct: 381 MNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALV 440
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY K G++E A F+ VD+D++SWN+MI+GYA+HG GK +L +FE M++ ++ D I
Sbjct: 441 TMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGI 500
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T +G++SAC+H GLV +G YF M +DY ++P +HY+CMVDL RAG L++A +L+
Sbjct: 501 TFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINK 560
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MPF A W LL ACR++ +L E AAE + ++P+++ YVLLSN+YA +G W +
Sbjct: 561 MPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQER 620
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+KVR M + VKK GYSW+EV+NK +F GD HP+ DRIY LEEL +LK G+
Sbjct: 621 AKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYY 680
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
TK VLHDV EE KE +L HSE+LA+A+G+++ P G PI+++KNLRVC DCH IK I
Sbjct: 681 PDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLI 740
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKI GR I++RD+NRFHHF GGSCSCGDYW
Sbjct: 741 SKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 132/254 (51%), Gaps = 5/254 (1%)
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
H++ LFD PQ ++ ++++ ++++L LF+ ++R G + S + VL C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L +GKQ+H Q +K GF VG +L+ MY K SVE+ F+E+ K+V+SW +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
++AGY ++G + AL LF M+ GIKP+ T +L + G VEKG + ++M
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKS 222
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ MV++ ++ + +A+ + +M +A +W +++ G L +A
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNG---LDLEA 278
Query: 598 AEVIFEMEPENAGM 611
E+ + M E +
Sbjct: 279 FELFYRMRLEGVKL 292
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G ++ W I+ +++NG D A+++F M R V N +LN P V +
Sbjct: 357 GVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASV-E 415
Query: 117 QMPQ-----------RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
Q Q L + +++ Y + ++ +A +F+ RD+VSWN+M+SGYA
Sbjct: 416 QGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA 475
Query: 166 QNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
Q+G + +IF+ M LE + I++ G+++A G + E F+
Sbjct: 476 QHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFD 523
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/649 (40%), Positives = 386/649 (59%), Gaps = 13/649 (2%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY 95
P + L R S + AGD + Q N AI H R G +A VF+ M R+ ++
Sbjct: 11 PFRCLLLRRFCSLGPPQRHAAGD--VFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTW 68
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N M+SG + N L AR+VFD MP R+ VSW +++GY R ++ AR LF +P R+VV
Sbjct: 69 NCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVV 128
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
SWN M+SGYA+NG AR +FD M ++++SW +++ Y++ + EA LF+S +
Sbjct: 129 SWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVREARELFDSMPSPP 188
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
N+L+ G+V+ + A+ +F +M R+ VSWN MITGYA+ + AQRLF+E P
Sbjct: 189 TSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPE 248
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
KDV + TA++ GY+QNG VD A +F MP ++TV+WN M+ G+V+ R+D A +LF M
Sbjct: 249 KDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEM 308
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++ SW+ ++ GY Q G++ A F R P D ISW +I+GY G +L L
Sbjct: 309 PDRDQISWHAILQGYVQQGDMDSANVWFPRAPNKDAISWNTLISGYKDEG----ALSLLS 364
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM R G + +++ + V+S CA+L SL GK +H +K GFE V ++L+ MY KCG
Sbjct: 365 EMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCG 424
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ EA FE I+ +D ++WN MIA YA HG +AL +F+ M G +PD T + ILS
Sbjct: 425 LISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILS 484
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H G + +G +F SM D+ ++P S HY+CMVDLLGR+G + +A + + +P +
Sbjct: 485 ACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRT 544
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W L AC +G+ +L E A + + P + GMY LLSN+YAA W + VR M
Sbjct: 545 TAWETLFSACNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFM 604
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP-------EKDRIYAYLEE 677
++RG+KK TG SW+E++ +V TFS D+ HP E D I +EE
Sbjct: 605 KERGLKKETGCSWIELKGEVVTFSSNDSNHPLIEQICQEVDSISVMIEE 653
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/634 (41%), Positives = 379/634 (59%), Gaps = 44/634 (6%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N LL Y ++G + +A LF+ + +V SWN+++ + K + D + +FD+M V D V
Sbjct: 62 NRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAV 121
Query: 249 SWNTMITGYAQNNYLAEAQRLF----EE-------------------------------- 272
S+NT+I G++ N ++A F EE
Sbjct: 122 SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI 181
Query: 273 ---APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+ + VF W A+ + Y + G +D+AR +FD M KN VSWN+MI+GY+Q + +
Sbjct: 182 VATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCT 241
Query: 330 ELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+LF M + + + +++ Y Q G I A F + + D + W ++ G AQ+G
Sbjct: 242 KLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNG 301
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
ED+L LF EM R + +SV+S+CA LASL G+ +HG+ V G + V +
Sbjct: 302 KEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSS 361
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG +A+ F+ ++ ++VISWN+MI GYA++G +AL L+E M +KP
Sbjct: 362 ALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKP 421
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D+IT VG+LSAC H GLVE+G YFYS+++ +G+ P HY+CM++LLGRAG +D+A +L
Sbjct: 422 DNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDL 481
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+K+M FEP+ W LL CR+ E AA +FE++P NAG Y++LSN+YAA GRW
Sbjct: 482 IKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRW 541
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
DV+ VR M++ +KK YSW+E+ N+VH F D H E ++IY L L KL++
Sbjct: 542 KDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQES 601
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR-PIRVMKNLRVCEDCHNA 744
GF T LVLHDV EEEK + YHSEKLA+A+ ++ P GR PIR+MKN+RVC DCH
Sbjct: 602 GFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVF 661
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+K +SKI+ R IILRD NRFHHF G CSC D W
Sbjct: 662 MKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 240/572 (41%), Gaps = 108/572 (18%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y +G L AR +FD+M +RD+ SWN M+S Y ++ ++ R +F+ M D V
Sbjct: 62 NRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAV 121
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ----------NGRI 201
S+NT+++G++ NG + A F RM E + + +L A Q +GRI
Sbjct: 122 SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI 181
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
A L ES V WN+L + K L A+W+FDRM ++ VSWN+MI+GY QN
Sbjct: 182 -VATSLGES-----VFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNG 235
Query: 262 YLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
+LF E + D T + ++S Y Q G +DEA F + EK+ V W M+
Sbjct: 236 QPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMV 295
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITG---------------------------- 349
G Q + + A LF M +NV N I+
Sbjct: 296 GCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDH 355
Query: 350 -----------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
Y++ GE A +F RM + ISW ++I GYAQ+G ++L L+ EM
Sbjct: 356 DLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEML 415
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ + F VLS C + +E G+ + K+
Sbjct: 416 HENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKI----------------------- 452
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
H D ++ MI R G+ A+ L +SM +P+ + +LS C
Sbjct: 453 ---HGMNPTFDH----YSCMINLLGRAGYMDKAVDLIKSMT---FEPNCLIWSTLLSVCR 502
Query: 519 HTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE---AQNLMKNMPFE 572
V G + + ++ N+ Y + ++ GR + ++LMKN +
Sbjct: 503 INCDVNNGEMAARHLFELDPH-----NAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIK 557
Query: 573 PDAA-TWGALLGACRLYGKTELAEKAAEVIFE 603
AA +W + + + E I+E
Sbjct: 558 KFAAYSWIEIDNQVHKFVAEDRTHSETEQIYE 589
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 218/501 (43%), Gaps = 66/501 (13%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + ++G A +F+ M RR S+NAM+S Y +G ++ R VFDQM D V
Sbjct: 62 NRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAV 121
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPK--------------------------------- 151
S+N +I+G+ N S A F M +
Sbjct: 122 SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI 181
Query: 152 ------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
V WN + + YA+ G D AR +FDRM+ KN +SWN +++ Y+QNG+ E
Sbjct: 182 VATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCT 241
Query: 206 MLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
LF S + V+ ++++ + + + +A F + +D+V W TM+ G AQN
Sbjct: 242 KLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNG 301
Query: 262 YLAEAQRLFEEAPVKDV----FTWTAMVS------GYVQNGKVDEARMIFDAMPEKNTVS 311
+A LF E +++V FT +++VS Q V +IF + + +
Sbjct: 302 KEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGV--DHDLLV 359
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH-- 369
+A++ Y + A +F+ M +NV SWN+MI GYAQ+G+ A L++ M
Sbjct: 360 SSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENL 419
Query: 370 --DCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGK 426
D I++ +++ +G E F + K +G ++ +++ ++
Sbjct: 420 KPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAV 479
Query: 427 QLHGQLVKVGFEAGCFVGNALLV---MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
L + + FE C + + LL + C + E A E+ + + + YA
Sbjct: 480 DL---IKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYA 536
Query: 484 RHGFGKDALMLFESMKTVGIK 504
G KD + MK IK
Sbjct: 537 ACGRWKDVAAVRSLMKNNKIK 557
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 176/397 (44%), Gaps = 61/397 (15%)
Query: 14 CILHQHTQSINRLQSPANTNPYPSKKTLKR----HLNSKSRNKPKPAGDWD------IRQ 63
C+ RLQ+ + + Y T + HL +KS N +D +
Sbjct: 32 CVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFS 91
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ + ++G + VF+ M +VSYN +I+G+ NG A + F +M +
Sbjct: 92 WNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGF 151
Query: 124 VS---------------------------------------WNVMISGYVRNKSLSAARN 144
S WN + + Y + +L AR
Sbjct: 152 ESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARW 211
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGR 200
LF+ M ++VVSWN+M+SGY QNG + ++F M L ++++ + +L+AY Q G
Sbjct: 212 LFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGY 271
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITG 256
I+EAC F + V W ++M G + + DA +F M + D + +++++
Sbjct: 272 IDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSS 331
Query: 257 YAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
A+ L + Q + +A + D+ +A+V Y + G+ +A ++F M +N +SW
Sbjct: 332 CARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISW 391
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
N+MI GY Q + A L+E M +N+ N G
Sbjct: 392 NSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVG 428
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 171/355 (48%), Gaps = 33/355 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-- 121
WN + + G D A +F+ M ++ VS+N+MISGYL NGQ + ++F +M
Sbjct: 193 WNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGL 252
Query: 122 --DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
D V+ + ++S Y + + A F + ++D V W TM+ G AQNG + A +F
Sbjct: 253 MPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFRE 312
Query: 180 MLEKN----------EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
ML +N +S LA+ Q + ++F + V S +L+ + K
Sbjct: 313 MLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSS--ALVDMYSKC 370
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMV 285
DA +F RM R+ +SWN+MI GYAQN EA L+EE + D T+ ++
Sbjct: 371 GETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVL 430
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-N 339
S + G V+ + F ++ + + ++ ++ MI + MD A +L ++MT + N
Sbjct: 431 SACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPN 490
Query: 340 VASWNTM-----ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
W+T+ I +GE+ AR+LF+ P H+ + + YA G +D
Sbjct: 491 CLIWSTLLSVCRINCDVNNGEMA-ARHLFELDP-HNAGPYIMLSNIYAACGRWKD 543
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 286/811 (35%), Positives = 433/811 (53%), Gaps = 111/811 (13%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----- 119
N I + +NG SA VF ++ R SVS+ AMISG NG + A +F Q+
Sbjct: 203 NPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACT 262
Query: 120 --------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+ N +++ Y R+ +LS+A +F M +RD VS+N+
Sbjct: 263 KVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNS 322
Query: 160 MLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKA--- 212
++SG AQ GY + A +F +M + + ++ LL+A G + F S A
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG-KQFHSYAIKA 381
Query: 213 --NWEVVSWNSLMGGFVKQKRLGDAKWIF------DRMPVRDEVSWNTMITGYAQNNYLA 264
++V SL+ +VK + A F D + ++ I G N +
Sbjct: 382 GMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTY 441
Query: 265 E----------AQRLFEEAPVK--------DVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
A L E+ + +V+ + ++ Y ++GK+D A IF + E
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE 501
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS------------------------ 342
+ VSW AMIAGY Q + A LF+ M + + S
Sbjct: 502 NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561
Query: 343 ---------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
N +++ YA+ G++ A FD++ D +SW ++++G+AQSGY
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYF 621
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
E++L +F +M + G +N F S +S AN+A++ +GKQ+HG + K G+++ V NAL
Sbjct: 622 EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNAL 681
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ +Y KCG++++ ISWN+MI GY++HG G +AL LFE MK + + P+
Sbjct: 682 ITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNH 728
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T VG+LSACSH GLV++G YF SM+ + ++P +HY C+VDLLGR+G L A+ ++
Sbjct: 729 VTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVE 788
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP +PDA W LL AC ++ ++ E AA + E+EP+++ YVL+SN+YA SG+W
Sbjct: 789 EMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDC 848
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
+ R M+DRGVKK G SW+EV N VH F GD HP D IY YL L+F+ ++G+
Sbjct: 849 RDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGY 908
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V +L D +K+ HSE+LA+A+G+LS+ + P+ V KNLRVCEDCHN IKH
Sbjct: 909 VPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKH 968
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+SKI R+II+RD+ RFHHF GSCSC DYW
Sbjct: 969 VSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 76/200 (38%), Gaps = 24/200 (12%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+++G R N F +L C N S + G L+ Y G
Sbjct: 72 MEQHGVRANSQTFLWLLEGCLNSRSF-------------------YDGLKLIDFYLAFGD 112
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+ A + F+E+ + + WN + + LF M T ++ D+ +L
Sbjct: 113 LNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRG 172
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPD 574
CS + + E ++ G S + C ++DL + G L A+ + +N+ D
Sbjct: 173 CSGNAVSFRFVEQIHAKTITSGF--ESSTFICNPLIDLYFKNGFLSSAKKVFENLK-ARD 229
Query: 575 AATWGALLGACRLYGKTELA 594
+ +W A++ G E A
Sbjct: 230 SVSWVAMISGLSQNGYEEEA 249
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 294/839 (35%), Positives = 447/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+ I + + G A VF + R +VS+ A++SGY NG + A +++ +M + +V
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 125 SW---------------------------------------NVMISGYVRNKSLSAARNL 145
N +IS Y+R +S A +
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M D V++NT++SG+AQ G+ D A IFD M L + ++ LLAA G +
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260
Query: 202 EEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ L ++ + + + SL+ +VK + +A IFD + V WN M+ Y
Sbjct: 261 RKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAY 320
Query: 258 AQNNYLAEAQRLFEEAPVKDV----FTWTAM----------------------------- 284
Q + LA++ +F V FT+ M
Sbjct: 321 GQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDM 380
Query: 285 -VSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC- 337
VSG Y + G +D+A+ I D + EK+ VSW +MIAGYVQ + A E F+ M
Sbjct: 381 YVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQAC 440
Query: 338 --------------------------------------KNVASWNTMITGYAQSGEITHA 359
+V+ WN ++ YA+ G A
Sbjct: 441 GIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEA 500
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+ F+ + + I+W +I+G+AQSG E++L++F++M + G + N F S +S ANL
Sbjct: 501 FSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANL 560
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A ++ GKQ+H +++K G+ + + NAL+ +Y KCGS+E+A F E+ ++ +SWNT+I
Sbjct: 561 ADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTII 620
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
++HG G +AL LF+ MK G+KP D+T VG+L+ACSH GLVE+G YF SM+ ++G+
Sbjct: 621 TCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGI 680
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P HY C+VD+LGRAG+LD A+ ++ MP D+ W LL AC+++ E+ E AA+
Sbjct: 681 HPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAK 740
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP ++ YVLLSN YA +G+W ++R M+DRGV+K G SW+EV+N VH F
Sbjct: 741 HLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFF 800
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP D+IY +L L +L + G+ + H+ +E K+ HSEKLAVA+G
Sbjct: 801 VGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFG 860
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S+P+ P+RV+KNLRVC DCH +K S ++GR I+LRD RFHHF+ GSCSCGDYW
Sbjct: 861 LMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 43/299 (14%)
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL-ELGKQLHGQLVKVG 436
+AG+ E L LF R L F L C L ++H + + G
Sbjct: 13 LAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKAIICG 72
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+GN L+ +Y K G V A FEE+ +D +SW +++GYA++G G++A+ L+
Sbjct: 73 LSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYR 132
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKG-------------TEYF--------YSMNR 535
M G+ P + ILSAC+ T L + G +E F Y R
Sbjct: 133 EMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCR 192
Query: 536 DYGVIP---------NSKHYTCMVDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLG 583
+ + +S + ++ + G D A + M PD+ T +LL
Sbjct: 193 SFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLA 252
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAASGRWGDVSKVRLKMRDRG 639
AC G ++ + + AGM Y++ +L + GD+ + L++ D G
Sbjct: 253 ACSAVGDLRKGKQLHSYLLK-----AGMSLDYIMEGSLLDLYVKSGDIEEA-LQIFDSG 305
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 54/287 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN + + R G A F ++ + +++N +ISG+ +G + A +VF +M
Sbjct: 480 DVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMD 539
Query: 120 QR-------DLVS--------------------------------WNVMISGYVRNKSLS 140
Q VS N +IS Y + S+
Sbjct: 540 QAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIE 599
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A+ F M KR+ VSWNT+++ +Q+G A +FD+M L+ +++++ G+L A
Sbjct: 600 DAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACS 659
Query: 197 QNGRIEEACMLFESKANWEVV-----SWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSW 250
G +EE F+S +N + + ++ + +L AK + MP+ D + W
Sbjct: 660 HVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVW 719
Query: 251 NTMITGYAQNNYLA----EAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
T+++ + L A+ L E P D ++ + + Y GK
Sbjct: 720 RTLLSACKVHKNLEIGEFAAKHLLELEP-HDSASYVLLSNAYAVTGK 765
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/646 (39%), Positives = 389/646 (60%), Gaps = 13/646 (2%)
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
+ D N +L+ YA++G AR++FD M +++ SWN +L+ Y ++G +E+
Sbjct: 50 LHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLR 109
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNN 261
++F++ + + VS+N+++ GF R G A +F RM E + +++ Q
Sbjct: 110 VIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLL 169
Query: 262 YLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
L +++ + +VF A+ Y + G++D+AR +FD M +N V+WN MI+
Sbjct: 170 DLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMIS 229
Query: 318 GYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
GY++ ++ + +LF M N+ + ++++ Y Q+G I AR +F + + D +
Sbjct: 230 GYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVC 289
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +I G AQ+G ED+L LF EM R + +SV+S+CA LASL G+ +HG+
Sbjct: 290 WTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAF 349
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+G V +AL+ MYCKCG +A+ F + ++V+SWN+MI GYA +G +AL
Sbjct: 350 LMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALS 409
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
L+E+M +KPD +T VG+LSAC H GLVE+G EYF SM+ +G+ P HY CMV+L
Sbjct: 410 LYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLF 469
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GR+G +D+A +L+ +M EP++ W +L C + G + E AA + E+ P NA Y+
Sbjct: 470 GRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYI 529
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
+LSN+YAA GRW DV+ +R M+ + VKK + YSW+E+ N+VH F D HP+ I+
Sbjct: 530 MLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHV 589
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG-RPIRVM 732
L L KL++ GF +T LVLHD GE+EK + YHSEKLA+AYG++ P G PIR++
Sbjct: 590 QLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRII 649
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KN+R C DCH +K +S I R +ILRD+NRFHHF G CSC DYW
Sbjct: 650 KNIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 220/503 (43%), Gaps = 99/503 (19%)
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
LH+F P + + +N +++ Y +G++ AR++FD+M QRD SWN M+S Y ++ +
Sbjct: 50 LHLFK--PNDTFI-HNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVE 106
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
R +F+ MP RD VS+NT++SG+A NG A +F RM L+ E + +L A
Sbjct: 107 DLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACT 166
Query: 197 Q----------NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
Q +GRI C L V N+L + + + A+ +FDRM +R+
Sbjct: 167 QLLDLRRGKQIHGRI-IICNL-----GGNVFVCNALTDLYARCGEIDQARRLFDRMVIRN 220
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFD 302
V+WN MI+GY +N + LF E V D T ++++ Y+Q G +DEAR +F
Sbjct: 221 VVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFG 280
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW-- 343
+ EK+ V W MI G Q + + A LF M +C +AS
Sbjct: 281 EIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYH 340
Query: 344 --------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
+ ++ Y + G A +F M + +SW ++I GYA
Sbjct: 341 GQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYAL 400
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G ++L L+ M + + F VLS C +H LV+ G E C +
Sbjct: 401 NGQDLEALSLYENMLEENLKPDSVTFVGVLSAC-----------VHAGLVEEGKEYFCSM 449
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
+ H E D + M+ + R G A+ L SM
Sbjct: 450 SDQ---------------HGLEPTPDH----YACMVNLFGRSGHMDKAVDLISSMSQ--- 487
Query: 504 KPDDITMVGILSACSHTGLVEKG 526
+P+ + +LS C G ++ G
Sbjct: 488 EPNSLIWTTVLSVCVMKGDIKHG 510
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 156/300 (52%), Gaps = 8/300 (2%)
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
V K ++ M +T N ++ Y ++ + AR+LF+ MT ++ SWN M++
Sbjct: 38 VDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLS 97
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
YA+SG + R +FD MP D +S+ +I+G+A +G +L +F+ M++ G +
Sbjct: 98 LYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYT 157
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
SVL+ C L L GKQ+HG+++ FV NAL +Y +CG +++A F+ +V
Sbjct: 158 HVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMV 217
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++V++WN MI+GY ++ + + LF M+ +KPD +T +L A G +++ +
Sbjct: 218 IRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARK 277
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE---PDAATWGALLGAC 585
F + V +T M+ + G+ ++A L M E PD T +++ +C
Sbjct: 278 VFGEIREKDEVC-----WTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSC 332
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 185/389 (47%), Gaps = 57/389 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + ++G A +F+ M +R + S+NAM+S Y +G ++ R +FD MP RD V
Sbjct: 62 NRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSV 121
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR-------------------------------- 152
S+N +ISG+ N A +F M K
Sbjct: 122 SYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRI 181
Query: 153 -------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
+V N + YA+ G D ARR+FDRM+ +N ++WN +++ Y++N + E+
Sbjct: 182 IICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCI 241
Query: 206 MLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
LF S + V+ +S++G +++ + +A+ +F + +DEV W MI G AQN
Sbjct: 242 DLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNG 301
Query: 262 YLAEAQRLFEEAPVK----DVFTWTAMVSGYVQ-----NGKVDEARMIFDAMPEKNTVSW 312
+A LF E ++ D +T +++VS + +G+V + + + VS
Sbjct: 302 KEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVS- 360
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH--- 369
+A++ Y + A +F M +NV SWN+MI GYA +G+ A +L++ M +
Sbjct: 361 SALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLK 420
Query: 370 -DCISWAAIIAGYAQSGYSEDSLRLFIEM 397
D +++ +++ +G E+ F M
Sbjct: 421 PDSVTFVGVLSACVHAGLVEEGKEYFCSM 449
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + + G A +F++M R+ VS+N+MI GY LNGQ A +++ M
Sbjct: 356 DLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENML 415
Query: 120 QRDL----VSWNVMISGYVRNKSLSAARNLFEMM-------PKRDVVSWNTMLSGYAQNG 168
+ +L V++ ++S V + + F M P D + M++ + ++G
Sbjct: 416 EENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPD--HYACMVNLFGRSG 473
Query: 169 YADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACM 206
+ D A + M E N + W +L+ V G I+ M
Sbjct: 474 HMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEM 512
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/744 (37%), Positives = 420/744 (56%), Gaps = 61/744 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGYVRNKSLSAARNLFEMM-- 149
NA+++ Y G +D AR++FD+ +R+ VSWN MIS YV+N A +F M
Sbjct: 139 NALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVW 198
Query: 150 --PKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEE 203
+ + ++ +++ + +A R++ ++ EK+ + N L+ Y + G IE
Sbjct: 199 SGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEM 258
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQ 259
A +FE +VVSWN+ + G V A + +M V + + ++++ A
Sbjct: 259 AATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAG 318
Query: 260 NNYLAEAQRL--FEEAPVKDV--FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
+++ F V D F +V Y ++G +D+AR +FD MP ++ + WNA+
Sbjct: 319 AGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNAL 378
Query: 316 IAGYVQTKRMDMARELFEAM----------------TCKNVAS----------------- 342
I+G R LF M K+ AS
Sbjct: 379 ISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKI 438
Query: 343 --------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
N +I Y + G++ +A +F D IS ++ +Q + ED+++LF
Sbjct: 439 GLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLF 498
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
++M R G + +S+L+ C +L++ E GKQ+H L+K F + F GNAL+ Y KC
Sbjct: 499 VQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKC 558
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GS+E+A AF + ++ ++SW+ MI G A+HG GK AL LF M G+ P+ IT+ +L
Sbjct: 559 GSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVL 618
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
SAC+H GLV+ +YF SM +G+ +HY CM+D+LGRAG+L++A L+ NMPF+ +
Sbjct: 619 SACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQAN 678
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
AA WGALLGA R++ EL AAE +F +EPE +G +VLL+N YA++G W +++KVR
Sbjct: 679 AAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKL 738
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
M+D VKK SW+E+++KVHTF VGD HP IY L EL + + G+V + ++
Sbjct: 739 MKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVD 798
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
LHDV EKE +L +HSE+LAVA+ ++S P+G PIRV KNLR+C DCH A K+ISKIV R
Sbjct: 799 LHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSR 858
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
II+RD NRFHHF+ G+CSCGDYW
Sbjct: 859 EIIIRDINRFHHFTNGTCSCGDYW 882
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 260/598 (43%), Gaps = 99/598 (16%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA----RRIFDRMLE 182
N +++ Y R + SAAR +F+ +P VSW+++++ Y+ NG A R + R +
Sbjct: 41 NHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVP 100
Query: 183 KNEISW--------------------------------NGLLAAYVQNGRIEEACMLFES 210
NE + N L+A Y G ++EA +F+
Sbjct: 101 CNEFALPVVLKCAPDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDE 160
Query: 211 ----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNY 262
VSWN+++ +VK + GDA +F M +E ++ ++ +
Sbjct: 161 YVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRD 220
Query: 263 LAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
L EA R A V KDVFT A+V Y + G ++ A +F+ MP + VSWNA I+
Sbjct: 221 L-EAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFIS 279
Query: 318 GYVQTKRMDMARELFEAM-----------------TCKNVASWNT--------------- 345
G V A EL M C ++N
Sbjct: 280 GCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADF 339
Query: 346 -------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
++ YA+ G + AR +FD MP+ D I W A+I+G + G + L LF M+
Sbjct: 340 DEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMR 399
Query: 399 RYGERL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
+ G L NR+ SVL + A+ ++ +Q+H K+G + V N L+ Y KCG
Sbjct: 400 KEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQ 459
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
++ A F+E D+IS TM+ ++ G+DA+ LF M G++PD + +L+A
Sbjct: 460 LDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNA 519
Query: 517 CSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
C+ E+G + + + + R + + +V + G +++A +P E
Sbjct: 520 CTSLSAYEQGKQVHAHLIKRQF--TSDVFAGNALVYAYAKCGSIEDADMAFSGLP-ERGI 576
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPEN-AGMYVLLSNLYAASGRWGDVSKVR 632
+W A++G +G ++A ++ M E A ++ L+++ +A G V +
Sbjct: 577 VSWSAMIGGLAQHGH---GKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAK 631
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 406 RSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
R+P T S L+ SL G LH L+K G AG N LL +Y +C A
Sbjct: 2 RTPETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAV 59
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+EI D +SW++++ Y+ +G +DAL+ F +M+ G+ ++ + +L V
Sbjct: 60 FDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---V 116
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK---NMPFEPDAATWGA 580
G + +++ ++ + +V + G G +DEA+ + + E +A +W
Sbjct: 117 RFGAQ-VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 581 LLGACRLYGKTELAEKAAEVIFEM 604
++ A Y K + + A V EM
Sbjct: 176 MISA---YVKNDQSGDAIGVFREM 196
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/574 (41%), Positives = 365/574 (63%), Gaps = 4/574 (0%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
+G+LD AR++FD+MPQRD VS+N MI+ Y++NK L A +F+ MP+R+VV+ + M+ GY
Sbjct: 78 HGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNVVAESAMIDGY 137
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
A+ G D AR++FD M ++N SW L++ Y G+IEEA LF+ VVSW ++
Sbjct: 138 AKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVL 197
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
GF + + A F MP ++ ++W M+ Y N +EA +LF E P ++V +W M
Sbjct: 198 GFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPERNVRSWNIM 257
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
+SG ++ +VDEA +F++MP++N VSW AM++G Q K + +AR+ F+ M K++A+W
Sbjct: 258 ISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKMIGIARKYFDLMPYKDMAAWT 317
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
MIT G + AR LFD++P+ + SW +I GYA++ Y ++L LF+ M R R
Sbjct: 318 AMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLMLRSCFRP 377
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N + TSV+++C + L Q H ++ +GFE ++ NAL+ +Y K G + A F
Sbjct: 378 NETTMTSVVTSCDGMVEL---MQAHAMVIHLGFEHNTWLTNALITLYSKSGDLCSARLVF 434
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E++ KDV+SW MI Y+ HG G AL +F M GIKPD++T VG+LSACSH GLV
Sbjct: 435 EQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTFVGLLSACSHVGLVH 494
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP-DAATWGALLG 583
+G F S+ Y + P ++HY+C+VD+LGRAG +DEA +++ +P D A ALLG
Sbjct: 495 QGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAGLVDEAMDVVATIPPSARDEAVLVALLG 554
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
ACRL+G +A E + E+EP ++G YVLL+N YAA G+W + +KVR +MR+R VK++
Sbjct: 555 ACRLHGDVAIANSIGEKLLELEPSSSGGYVLLANTYAAEGQWDEFAKVRKRMRERNVKRI 614
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
GYS +++ K H F VG+ HP+ + IY L++
Sbjct: 615 PGYSQIQITGKNHVFVVGERSHPQIEEIYRLLQQ 648
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/444 (34%), Positives = 230/444 (51%), Gaps = 68/444 (15%)
Query: 52 KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN------ 105
KP+ + D + + NV IT R+G D A +F+ MP+R VSYN+MI+ YL N
Sbjct: 57 KPRSSDD-ALHKRNVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEA 115
Query: 106 -------------------------GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
G+LD AR+VFD M QR+ SW +ISGY +
Sbjct: 116 ETVFKEMPQRNVVAESAMIDGYAKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGKIE 175
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
A +LF+ MP+R+VVSW ++ G+A+NG D A R F M EKN I+W ++ AY+ NG
Sbjct: 176 EALHLFDQMPERNVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGC 235
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
EA LF V SWN ++ G ++ R+ +A +F+ MP R+ VSW M++G AQN
Sbjct: 236 FSEAYKLFLEMPERNVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQN 295
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
+ A++ F+ P KD+ WTAM++ V G +DEAR +FD +PEKN SWN MI GY
Sbjct: 296 KMIGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYA 355
Query: 321 QTKRMDMARELFEAM-----------------TCKNVA-----------------SW--N 344
+ + A LF M +C + +W N
Sbjct: 356 RNSYVGEALNLFVLMLRSCFRPNETTMTSVVTSCDGMVELMQAHAMVIHLGFEHNTWLTN 415
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+IT Y++SG++ AR +F+++ D +SW A+I Y+ G+ +L++F M G +
Sbjct: 416 ALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKP 475
Query: 405 NRSPFTSVLSTCANLASLELGKQL 428
+ F +LS C+++ + G++L
Sbjct: 476 DEVTFVGLLSACSHVGLVHQGRRL 499
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 138/260 (53%), Gaps = 21/260 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++R WN+ I+ +R D A+ +F SMP R+ VS+ AM+SG N + AR+ FD MP
Sbjct: 250 NVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKMIGIARKYFDLMP 309
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+D+ +W MI+ V + AR LF+ +P+++V SWNTM+ GYA+N Y A +F
Sbjct: 310 YKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVL 369
Query: 180 MLEK----NEISWNGLLAAYVQNGRIEEACMLFESKA-----NWEVVSW--NSLMGGFVK 228
ML NE + ++ + +G +E L ++ A +E +W N+L+ + K
Sbjct: 370 MLRSCFRPNETTMTSVVTSC--DGMVE----LMQAHAMVIHLGFEHNTWLTNALITLYSK 423
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAM 284
L A+ +F+++ +D VSW MI Y+ + + A ++F V D T+ +
Sbjct: 424 SGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTFVGL 483
Query: 285 VSGYVQNGKVDEARMIFDAM 304
+S G V + R +FD++
Sbjct: 484 LSACSHVGLVHQGRRLFDSI 503
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/718 (37%), Positives = 405/718 (56%), Gaps = 47/718 (6%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
++ + Q+F + + N M+ GY++ S A +++ M + +V + N Q+
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135
Query: 168 GYADAA----RRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
A + I D +L + + N L+ Y G + +A +F+ + ++VSW
Sbjct: 136 CSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSW 195
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
NS++ G+V + +AK ++DRMP R+ ++ N+MI + + + EA +LF E KD+
Sbjct: 196 NSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLV 255
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---------------------------- 311
+W+A++S Y QN +EA ++F M +
Sbjct: 256 SWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLV 315
Query: 312 -----------WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
NA+I Y + + A++LF C + SWN+MI+GY + GEI AR
Sbjct: 316 VKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKAR 375
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LFD MP D +SW+A+I+GYAQ ++L LF EM+ G + + + SV+S C +LA
Sbjct: 376 ALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLA 435
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+L+ GK +H + K G + +G L+ MY K G VE+A F+ + +K V +WN +I
Sbjct: 436 ALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALIL 495
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G A +G +L F MK G+ P++IT V +L AC H GLV++G +F SM +++ +
Sbjct: 496 GLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIG 555
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
PN KHY CMVDLLGRAG L EA+ L+++MP PD +TWGALLGAC+ YG E E+
Sbjct: 556 PNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRK 615
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+ E+ P++ G VLLSN+YA+ G W DV +VR MR GV K G S +E +VH F
Sbjct: 616 LVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLA 675
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HP+ + I L+E+ KLK +G+ T+ V D+ EEEKE L HSEKLA+A+G+
Sbjct: 676 GDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGL 735
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++I PIR++KNLR+C DCH A K ISK R I++RD +RFHHF GSCSC DYW
Sbjct: 736 IAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 222/460 (48%), Gaps = 36/460 (7%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ N I + G A VF+ VS+N+M++GY+L G ++ A+
Sbjct: 154 KVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKD 213
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
V+D+MP+R++++ N MI + + ++ A LF M ++D+VSW+ ++S Y QN + A
Sbjct: 214 VYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEA 273
Query: 174 RRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEEACML---FESKANWEVVSWNS 221
+F M + +E+ +L+A V G++ ++ E+ N + N+
Sbjct: 274 LILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQ----NA 329
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
L+ + + + A+ +F D++SWN+MI+GY + + +A+ LF+ P KD +W
Sbjct: 330 LIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSW 389
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTC 337
+AM+SGY Q + E ++F M + T ++I+ +D + + +
Sbjct: 390 SAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRK 449
Query: 338 K----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
N+ T+I Y + G + A +F + + +W A+I G A +G + SL+
Sbjct: 450 NGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKT 509
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV---KVGFEA---GCFVGNAL 447
F EMK +G N F +VL C ++ ++ G + ++ K+G GC V
Sbjct: 510 FSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVD--- 566
Query: 448 LVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+ + G ++EA E + + DV +W ++ ++G
Sbjct: 567 --LLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYG 604
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 302/843 (35%), Positives = 440/843 (52%), Gaps = 129/843 (15%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
R ++ + R CC A VF+ +P VS++++++ Y NG A Q F M
Sbjct: 39 FRNHLISFYSKCRRPCC--ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRA 96
Query: 121 RDLVSWNV---MISGYVRNKSLSAARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARR 175
+ ++ V + L A + M DV N +++ Y G+ D ARR
Sbjct: 97 EGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARR 156
Query: 176 IFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKA---------------------- 212
+F+ E+N +SWNGL++AYV+N + +A +F
Sbjct: 157 VFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 216
Query: 213 -----------------NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ +V + N+L+ ++K R+ A IF++MP D VSWN +I+
Sbjct: 217 NIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALIS 276
Query: 256 GYAQNNYLAEAQRLFEEAP----VKDVFTWTA---------------------------- 283
G N + A L + V +VFT ++
Sbjct: 277 GCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADS 336
Query: 284 -------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE--- 333
+V Y +N +D+AR +FD M ++ + NA+I+G R D A LF
Sbjct: 337 DDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELR 396
Query: 334 -----------AMTCKNVASW-------------------------NTMITGYAQSGEIT 357
A K+ AS N +I Y + ++
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLS 456
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF--TSVLST 415
A +F+ D I+ ++I +Q + E +++LF+EM R G L PF +S+L+
Sbjct: 457 DANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG--LEPDPFVLSSLLNA 514
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA+L++ E GKQ+H L+K F + F GNAL+ Y KCGS+E+A AF + ++ V+SW
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 574
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+ MI G A+HG GK AL LF M GI P+ ITM +L AC+H GLV++ YF SM
Sbjct: 575 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+G+ +HY+CM+DLLGRAG+LD+A L+ +MPF+ +A+ WGALLGA R++ EL +
Sbjct: 635 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGK 694
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AAE +F +EPE +G +VLL+N YA++G W +V+KVR M+D +KK SW+EV++KV
Sbjct: 695 LAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKV 754
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
HTF VGD HP IYA L EL + + GFV + + LHD+ EKE +L +HSE+LA
Sbjct: 755 HTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLA 814
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
VA+ +LS P G PIRV KNLR+C DCH A K ISKIV R II+RD NRFHHF G+CSCG
Sbjct: 815 VAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCG 874
Query: 776 DYW 778
DYW
Sbjct: 875 DYW 877
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 174/435 (40%), Gaps = 95/435 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + +M+ G D A +F MP VS+NA+ISG +LNG A ++ Q
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPKRDVVSWNTMLSG----YAQNGY 169
M LV +S ++ S + A R + M K + S + + G YA+N +
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-------------------ES 210
D AR++FD M ++ I N L++ GR +EA LF +S
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Query: 211 KANWEVVSW--------------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
A+ E S N L+ + K L DA +F+ D ++
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIAC 473
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVK---------------------------------- 276
+MIT +Q ++ A +LF E K
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 277 -----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
D F A+V Y + G +++A + F ++PE+ VSW+AMI G Q A EL
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593
Query: 332 FEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYA 382
F M + + + +++ +G + A+ F+ M + I ++ +I
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653
Query: 383 QSGYSEDSLRLFIEM 397
++G +D++ L M
Sbjct: 654 RAGKLDDAMELVNSM 668
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/763 (36%), Positives = 423/763 (55%), Gaps = 62/763 (8%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K + D + N + +R G +AL V++ MP +++VS N MISGY+ G L AR
Sbjct: 37 KTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARH 96
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSG----YA 165
+FD MP R +V+W +++ Y N A LF M + D V++ T+L G
Sbjct: 97 LFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVP 156
Query: 166 QNG----YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
QN +A A + FD L N LL +Y + R++ AC+LFE + + V++N+
Sbjct: 157 QNAVGQVHAFAVKLGFDTNLFLT--VCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNT 214
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL----FEEA 273
L+ G+ K +A +F +M + +++ ++ + A Q+L
Sbjct: 215 LITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTG 274
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
+D ++ Y ++ +V E R +F+ MPE + VS+N +I+ Y Q ++ + + LF
Sbjct: 275 FSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFR 334
Query: 334 AMTC-----------------KNVASW----------------------NTMITGYAQSG 354
M C N++S N+++ YA+
Sbjct: 335 EMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCE 394
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
A +F + Q +SW A+I+GY Q G L+LF +M+ R ++S F +VL
Sbjct: 395 MFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLK 454
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
A ASL LGKQLH +++ G F G+ L+ MY KCGS+++A FEE+ D++ +S
Sbjct: 455 ASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 514
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WN +I+ YA +G G+ A+ F M G++PD ++++G+L ACSH G VE+GTE+F +M+
Sbjct: 515 WNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMS 574
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
YG+ P KHY CM+DLLGR GR EA+ LM MPFEPD W ++L ACR+Y LA
Sbjct: 575 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLA 634
Query: 595 EKAAEVIFEMEP-ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
E+AAE +F ME +A YV +SN+YAA+G+W +V V+ MR+RG+KKV YSW+EV +
Sbjct: 635 ERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNH 694
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
K+H FS D HP D I + EL +++++G+ T V+ D+ E+ K L+YHSE+
Sbjct: 695 KIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSER 754
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
LAVA+ ++S P G PI VMKNLR C DCH AIK ISKIV R+I
Sbjct: 755 LAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVI 797
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 252/547 (46%), Gaps = 67/547 (12%)
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN--------------GYADAARRIFDR 179
VR+++L+ R L + P V + +G+ + G AA +++D
Sbjct: 10 VRSRTLATLRQLRQPPPATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDE 69
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M KN +S N +++ YV+ G + A LF++ + VV+W LMG + +A +F
Sbjct: 70 MPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLF 129
Query: 240 DRM----PVRDEVSWNTMITG-------------------------------------YA 258
+M + D V++ T++ G Y
Sbjct: 130 RQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYC 189
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNA 314
+ L A LFEE KD T+ +++GY ++G EA +F M + + +++
Sbjct: 190 EVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSG 249
Query: 315 MIAGYVQTKRMDMAREL--FEAMT--CKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
++ V + ++L T ++ + N ++ Y++ + RNLF+ MP+ D
Sbjct: 250 VLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELD 309
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+S+ +I+ Y+Q+ E+SL LF EM+ G PF ++LS ANL+SL++G+Q+H
Sbjct: 310 FVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHC 369
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
Q + ++ VGN+L+ MY KC +EA F+ + + +SW +I+GY + G
Sbjct: 370 QAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGA 429
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
L LF M+ ++ D T +L A + + G + + R G + N + +V
Sbjct: 430 GLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRS-GNLENVFSGSGLV 488
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE--MEPEN 608
D+ + G + +A + + MP + +A +W AL+ A G E A A + + ++P++
Sbjct: 489 DMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDS 547
Query: 609 AGMYVLL 615
+ +L
Sbjct: 548 VSILGVL 554
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 153/376 (40%), Gaps = 61/376 (16%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYL 103
++RN + D +NV I+++ + + +L++F M R + + M+S
Sbjct: 297 ETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAA 356
Query: 104 LNGQLDPARQVFDQ----MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
L RQV Q L N ++ Y + + A +F+ + +R VSW
Sbjct: 357 NLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTA 416
Query: 160 MLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI----EEACMLFESK 211
++SGY Q G A ++F +M L ++ ++ +L A + + + S
Sbjct: 417 LISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSG 476
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN----------- 260
V S + L+ + K + DA +F+ MP R+ VSWN +I+ YA N
Sbjct: 477 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFT 536
Query: 261 ------------------------NYLAEAQRLFEE-APVKDVFT----WTAMVSGYVQN 291
++ + F+ +P+ + + M+ +N
Sbjct: 537 KMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRN 596
Query: 292 GKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM----ARELFEAMTCKNVASWNTM 346
G+ EA + D MP E + + W++++ K + A +LF ++ A++ +M
Sbjct: 597 GRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSM 656
Query: 347 ITGYAQSGEITHARNL 362
YA +G+ + R++
Sbjct: 657 SNIYAAAGKWENVRHV 672
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 300/844 (35%), Positives = 440/844 (52%), Gaps = 131/844 (15%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+R ++ + R CC A VF+ +P VS++++++ Y NG A Q F M
Sbjct: 39 LRNHLISFYSKCRRPCC--ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRA 96
Query: 121 RDLVSWNV---MISGYVRNKSLSAARNLFEMMP--KRDVVSWNTMLSGYAQNGYADAARR 175
+ ++ V + L A + M DV N +++ Y G+ D ARR
Sbjct: 97 EGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARR 156
Query: 176 IFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW-------------------- 214
+FD E+N +SWNGL++AYV+N + +A +F + W
Sbjct: 157 VFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVF-GEMVWSGIQPTEFGFSCVVNACTGS 215
Query: 215 --------------------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
+V + N+L+ +VK R+ A IF++MP D VSWN +I
Sbjct: 216 RNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALI 275
Query: 255 TGYAQNNYLAEAQRLF----EEAPVKDVFTWTA--------------------------- 283
+G N + A L V +VF ++
Sbjct: 276 SGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANAD 335
Query: 284 --------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE-- 333
+V Y +N +D+A +FD M ++ + WNA+I+G R D A +F
Sbjct: 336 SDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGL 395
Query: 334 ------------AMTCKNVASW-------------------------NTMITGYAQSGEI 356
A K+ AS N +I Y + +
Sbjct: 396 RKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCL 455
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF--TSVLS 414
+ A +F+ D I+ ++I +Q + E +++LF+EM R G L PF +S+L+
Sbjct: 456 SDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG--LEPDPFVLSSLLN 513
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA+L++ E GKQ+H L+K F + F GNAL+ Y KCGS+E+A AF + ++ V+S
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS 573
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W+ MI G A+HG GK AL LF M GI P+ ITM +L AC+H GLV++ YF SM
Sbjct: 574 WSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMK 633
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+G+ +HY+CM+DLLGRAG+LD+A L+ +MPF+ +A+ WGALLGA R++ EL
Sbjct: 634 EMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELG 693
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
+ AAE +F +EPE +G +VLL+N YA+SG W +V+KVR M+D +KK SW+EV++K
Sbjct: 694 KLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDK 753
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
VHTF VGD HP IY+ L+EL + + G++ + + LHD+ EKE +L +HSE+L
Sbjct: 754 VHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERL 813
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
AVA+ +LS P G PIRV KNLR+C DCH A K IS IV R II+RD NRFHHF G+CSC
Sbjct: 814 AVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSC 873
Query: 775 GDYW 778
GDYW
Sbjct: 874 GDYW 877
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 172/433 (39%), Gaps = 67/433 (15%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL----NGQLDPARQ 113
D D+ WN I+ + NG A+ + M V M+S L G D RQ
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 324
Query: 114 VFDQMPQRDLVSWNVMISG----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ M + + S + + G Y +N L A +F+ M RD++ WN ++SG + G
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGR 384
Query: 170 ADAARRIFDRMLEKN-EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW-------NS 221
D A IF + ++ ++ L A +E A + A E + + N
Sbjct: 385 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG 444
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----- 276
L+ + K L DA +F+ D ++ +MIT +Q ++ A +LF E K
Sbjct: 445 LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 504
Query: 277 ----------------------------------DVFTWTAMVSGYVQNGKVDEARMIFD 302
D F A+V Y + G +++A + F
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITH 358
++PE+ VSW+AMI G Q A ELF M + + + +++ +G +
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 359 ARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
A+ F+ M + I ++ +I ++G +D++ L M + N S + ++L
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF---QANASVWGALL 681
Query: 414 STCANLASLELGK 426
ELGK
Sbjct: 682 GASRVHKDPELGK 694
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L+ A +L G LH L+K GF A + N L+ Y KC A F+EI D
Sbjct: 11 LTRYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCH 68
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SW++++ Y+ +G + A+ F M+ G+ ++ + +L L + ++
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQ----VHA 124
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M G + +V + G G +D+A+ + E +A +W L+ A Y K +
Sbjct: 125 MAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA---YVKND 181
Query: 593 LAEKAAEVIFEM 604
A +V EM
Sbjct: 182 QCGDAIQVFGEM 193
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/832 (34%), Positives = 443/832 (53%), Gaps = 107/832 (12%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY 95
P + TL ++L ++ PKP+ + + H+ + H+ + ++
Sbjct: 3 PYRATLFQNLVLRNSPAPKPSLN----------SNHLIDA------HIVKTGFNPNTCRS 46
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ +L G L A QVFDQMP ++ +S N+MISG+++ LS AR LF+ M +R V
Sbjct: 47 NFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAV 106
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY----VQNGRIEEACML 207
SW ++ GY Q+ + A R++ M +E + ++ LL+ + +N ++ +
Sbjct: 107 SWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHV 166
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + ++ NSL+ + K L A +F M +D V++N+++TGY+ EA
Sbjct: 167 IKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAI 226
Query: 268 RLFEEAP---------------------------------------VKDVFTWTAMVSGY 288
LF E V +VF A++ Y
Sbjct: 227 ELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYY 286
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGY---------------VQTKRMDMARELFE 333
++ +VDE +F MPE + +S+N +I Y +Q R D R F
Sbjct: 287 SKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD--RRQFP 344
Query: 334 AMTCKNVASW--------------------------NTMITGYAQSGEITHARNLFDRMP 367
T ++A+ N ++ YA+ A+ +FD +
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ W A+I+ Y Q G E+ + +F +M+R G +++ F S+L CANLAS+ LG+Q
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ 464
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
LH L++ GF + + G+ALL Y KCG + +A +F E+ +++ +SWN +I+ YA++G
Sbjct: 465 LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGN 524
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
L F+ M G KPD ++ + +LSACSH G VE+ +F SM + Y V P +HYT
Sbjct: 525 VDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYT 584
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP- 606
MVD+L R GR DEA+ LM MPFEP W ++L +CR++ ELA+KAA+ +F ME
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDL 644
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+A Y+ +SN+YA +G+W +V+KV+ MRDRGV+KV YSW+E++++ H FS D HP
Sbjct: 645 RDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHP 704
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
E +I + L ++++ G+ T LHDV E K L+YHSE+ A+A+ +++ P G
Sbjct: 705 EMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDG 764
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PI VMKNLR C DCH AIK IS+IV R II+RD++RFHHF G CSCGDYW
Sbjct: 765 SPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/622 (40%), Positives = 363/622 (58%), Gaps = 43/622 (6%)
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW---NTMITG 256
R+ EA L + +L+ +KQ+ L + K + + + N ++
Sbjct: 103 RLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIGLYISNRLLDM 162
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ L +A+++F+E +D+ +W M+SGYV+ G ++AR +FD MP ++ SW A+I
Sbjct: 163 YAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAII 222
Query: 317 AGYVQTKRMDMARELFEAMTCKNVAS---------------------------------- 342
+G VQ R + A EL+ M + +
Sbjct: 223 SGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGL 282
Query: 343 ------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
W +++ Y + G I AR +FD+M + D +SW +I Y ++G E+ LF
Sbjct: 283 DSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRH 342
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
+ N F VL+ CA+LA+ +LGKQ+H +V+VGF++ +AL+ MY KCG
Sbjct: 343 LMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGD 402
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+E A FE + D+ SW +++ GYA+HG AL FE + G KPD I +G+LSA
Sbjct: 403 IENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSA 462
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C+H GLV+KG EYF+S+ +G+ HY C++DLL RAG+ EA++++ MP +PD
Sbjct: 463 CAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKY 522
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W ALLG CR++G ELA++AA+ +FE+EPEN YV L+N+YA++G + + +R M
Sbjct: 523 IWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMD 582
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
RG+ K G SW+E++ +VH FSVGD HP+ I YL EL ++K+ G+V T VLH
Sbjct: 583 SRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLH 642
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
DV E+KE L YHSEKLAVA+GI+S P+G PI+V KNLR C DCHNAIK IS I GR I
Sbjct: 643 DVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKI 702
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
I+RD+NRFH F GGSCSC DYW
Sbjct: 703 IVRDSNRFHCFEGGSCSCKDYW 724
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 156/325 (48%), Gaps = 23/325 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y G L A +VFD+M RDL SWN+MISGYV+ + ARNLF+ MP RD
Sbjct: 157 NRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNF 216
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA--- 212
SW ++SG Q+ + A ++ R+++K++ S + L K
Sbjct: 217 SWTAIISGCVQHNRPEEALELY-RLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHG 275
Query: 213 -------NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+ + V W SL+ + K + +A++IFD+M RD VSW TMI Y +N E
Sbjct: 276 HIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREE 335
Query: 266 AQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW----NAMIA 317
LF ++ FT+ +++ D + I M S+ +A++
Sbjct: 336 GFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVH 395
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCIS 373
Y + ++ A+ +FE + ++ SW +++ GYAQ G+ A + F+ + + D I+
Sbjct: 396 MYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIA 455
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMK 398
+ +++ A +G + L F +K
Sbjct: 456 FIGVLSACAHAGLVDKGLEYFHSIK 480
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 172/389 (44%), Gaps = 66/389 (16%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K +G + N + + + G A VF+ M R S+N MISGY+ G + AR
Sbjct: 146 KTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARN 205
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV------------------- 154
+FD+MP RD SW +ISG V++ A L+ +M K D
Sbjct: 206 LFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIP 265
Query: 155 ---------------------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
V W ++L Y + G + AR IFD+M E++ +SW ++
Sbjct: 266 SLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIH 325
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV------------KQKRLGDAKWIFDR 241
Y++NGR EE LF N ++ + G + KQ + FD
Sbjct: 326 TYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDS 385
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
+ + ++ Y++ + A+ +FE P D+F+WT+++ GY Q+G+ D+A F
Sbjct: 386 F----SSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFF 441
Query: 302 DAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VASWNTMITGYAQ 352
+ + + T +++ +++ +D E F ++ K+ + + +I A+
Sbjct: 442 ELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLAR 501
Query: 353 SGEITHARNLFDRMP-QHDCISWAAIIAG 380
+G+ T A ++ + MP + D WAA++ G
Sbjct: 502 AGQFTEAESIINEMPIKPDKYIWAALLGG 530
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+ LR +++ E+ S + ++L C +L+ GKQ+H +K G ++ N L
Sbjct: 101 QSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRL 159
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
L MY KCGS+ +A F+E+V +D+ SWN MI+GY + G + A LF+ M D+
Sbjct: 160 LDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPN----RDN 215
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNR-DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+ I+S C E+ E + M + DY SK C + A + ++
Sbjct: 216 FSWTAIISGCVQHNRPEEALELYRLMQKHDY-----SKSNKCTISSALAASAAIPSLHMG 270
Query: 567 KN-------MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
K M + D W +LL +YGK E+A + +ME + + + + Y
Sbjct: 271 KKIHGHIMRMGLDSDEVVWCSLLD---MYGKCGSIEEARYIFDKMEERDVVSWTTMIHTY 327
Query: 620 AASGR 624
+GR
Sbjct: 328 LKNGR 332
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/691 (40%), Positives = 394/691 (57%), Gaps = 83/691 (12%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLA 193
+LS A LFE + + + WNTM+ G + + A + RML E N ++ LL
Sbjct: 81 NLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLK 140
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
+ + G +E + G +K LG D ++
Sbjct: 141 SCAKVGATQEG---------------KQIHGHVLK---LGLES---------DPFVHTSL 173
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
I YAQN L A+ +F ++ ++D ++TA+++GY G +D+AR +F+ +P ++ VSWN
Sbjct: 174 INMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWN 233
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVA--------------------------SW---- 343
AMIAGY Q+ R + A F+ M NVA SW
Sbjct: 234 AMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDH 293
Query: 344 ---------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
N +I Y++ G++ AR+LF+ + + D ISW +I GY+ +++L LF
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALF 353
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG-------NAL 447
+M++ N F S+L CA L +L+LGK +H + K F+G +L
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK------FLGLTNTSLWTSL 407
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KCG++E A F + K + SWN MI+G A HG AL LF M+ G +PDD
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
IT VG+LSACSH GLVE G + F SM DY + P +HY CM+DLLGRAG DEA+ LMK
Sbjct: 468 ITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMK 527
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
NM +PD A WG+LLGACR++G EL E AA+ +FE+EPEN G YVLLSN+YA +GRW D
Sbjct: 528 NMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDD 587
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
V+++R K+ D+G+KKV G S +EV + VH F VGD +H + IY L+E++ L++ G
Sbjct: 588 VARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGH 647
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V T VL+D+ EE KE L +HSEKLA+A+G++S IR++KNLRVC +CH+AIK
Sbjct: 648 VPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKL 707
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKI R II RD NRFHHF GSCSC DYW
Sbjct: 708 ISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 213/511 (41%), Gaps = 103/511 (20%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
HV + ++I+ Y NG+L A VF + RD VS+ +I+GY L
Sbjct: 157 HVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ 197
AR LFE +P RD VSWN M++GYAQ+G + A F M + NE + +L+A Q
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276
Query: 198 NGRIEEACMLFESKANWEVVSW-------------NSLMGGFVKQKRLGDAKWIFDRMPV 244
+G +E NW V SW N+L+ + K L A+ +F+ +
Sbjct: 277 SGSLE--------LGNW-VRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMI 300
+D +SWN MI GY+ N EA LF + +V T+ +++ G +D + I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 301 FDAMPEK-----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE 355
+ +K NT W ++I Y + ++ A+++F M K++ SWN MI+G A G
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
A LF +M G+ D + F VLS
Sbjct: 448 ANMALELFRQM---------------RDEGFEPDDIT----------------FVGVLSA 476
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C++ +ELG+Q CF S+ E Y + + +
Sbjct: 477 CSHAGLVELGRQ-------------CF------------SSMVEDYD-----ISPKLQHY 506
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
MI R G +A L MK + +KPD +L AC G VE G ++
Sbjct: 507 GCMIDLLGRAGLFDEAEAL---MKNMEMKPDGAIWGSLLGACRVHGNVELGE---FAAKH 560
Query: 536 DYGVIP-NSKHYTCMVDLLGRAGRLDEAQNL 565
+ + P N Y + ++ AGR D+ +
Sbjct: 561 LFELEPENPGAYVLLSNIYATAGRWDDVARI 591
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 182/385 (47%), Gaps = 29/385 (7%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I + +NG A VF+ R +VS+ A+I+GY L G LD AR++F+++P RD VSWN
Sbjct: 174 INMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWN 233
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSGYAQNGYADAAR----RIFDR 179
MI+GY ++ A F+ M + +V + T+LS AQ+G + I D
Sbjct: 234 AMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDH 293
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
L N N L+ Y + G +++A LFE +++SWN ++GG+ +A +F
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALF 353
Query: 240 DRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQ 290
+M ++V++ +++ A L + + K + WT+++ Y +
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
G ++ A+ +F M K+ SWNAMI+G +MA ELF M + + G
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473
Query: 351 ----AQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+ +G + R F M + IS + +I ++G +++ L MK
Sbjct: 474 LSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEAL---MKNME 530
Query: 402 ERLNRSPFTSVLSTCANLASLELGK 426
+ + + + S+L C ++ELG+
Sbjct: 531 MKPDGAIWGSLLGACRVHGNVELGE 555
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 133/262 (50%), Gaps = 33/262 (12%)
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G +++A LF+ + Q + W +I G + S ++ ++ M G N F +L
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS----------------- 456
+CA + + + GKQ+HG ++K+G E+ FV +L+ MY + G
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199
Query: 457 --------------VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+++A FEEI +D +SWN MIAGYA+ G ++AL F+ MK
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+ P++ TMV +LSAC+ +G +E G + S D+G+ N + ++D+ + G LD+A
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGN-WVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318
Query: 563 QNLMKNMPFEPDAATWGALLGA 584
++L + + E D +W ++G
Sbjct: 319 RDLFEGI-CEKDIISWNVMIGG 339
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 186/437 (42%), Gaps = 71/437 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D + IT + GC D A +F +P R +VS+NAMI+GY +G+ + A F +M
Sbjct: 197 DAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK 256
Query: 120 QRDLV--------------------------SW-------------NVMISGYVRNKSLS 140
+ ++ SW N +I Y + L
Sbjct: 257 RANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLD 316
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AR+LFE + ++D++SWN M+ GY+ A +F +M +E N++++ +L A
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376
Query: 197 QNGRIEEACML-------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
G ++ + F N + W SL+ + K + AK +F M + S
Sbjct: 377 YLGALDLGKWIHAYIDKKFLGLTNTSL--WTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS 434
Query: 250 WNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
WN MI+G A + + A LF +E D T+ ++S G V+ R F +M
Sbjct: 435 WNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV 494
Query: 306 EKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTM-----ITGYAQSG 354
E +S + MI + D A L + M K + A W ++ + G + G
Sbjct: 495 EDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELG 554
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
E A++LF+ P++ ++ + YA +G +D R+ ++ G + + P S +
Sbjct: 555 EFA-AKHLFELEPENPG-AYVLLSNIYATAGRWDDVARIRTKLNDKG--MKKVPGCSSIE 610
Query: 415 TCANLASLELGKQLHGQ 431
+ + +G ++H Q
Sbjct: 611 VDSVVHEFLVGDKVHEQ 627
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 47/275 (17%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC---GSVEEA 460
L P ++LSTC + +L KQ+H Q++K G F + L+ +C G++ A
Sbjct: 30 LQNHPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSK-LIEFCAISPFGNLSYA 85
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
FE I + WNTMI G + A+ + M G++P+ T +L +C+
Sbjct: 86 LLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKV 145
Query: 521 GLVEKGTEY---------------------FYSMNRDYGV---------IPNSKHYTCMV 550
G ++G + Y+ N + G + ++ +T ++
Sbjct: 146 GATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALI 205
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME----- 605
G LD+A+ L + +P DA +W A++ Y ++ E+A EM+
Sbjct: 206 TGYTLRGCLDDARRLFEEIPVR-DAVSWNAMIAG---YAQSGRFEEALAFFQEMKRANVA 261
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
P + M +LS A SG + VR + D G+
Sbjct: 262 PNESTMVTVLSAC-AQSGSLELGNWVRSWIEDHGL 295
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/572 (43%), Positives = 352/572 (61%), Gaps = 12/572 (2%)
Query: 219 WNSLMGGFVKQKR--------LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+N L+ G+ + R L DA+ +FDR+P D VS+NT+++ + + A+ LF
Sbjct: 46 YNRLLAGYARAARPGGRRDRLLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLF 105
Query: 271 EEAPV--KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
P ++V +W M+SG ++G V EAR +F AMP +N++SWNAM++ + M A
Sbjct: 106 AAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAA 165
Query: 329 RELFE-AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
E FE A +N W M++GY SG + A F+ MP +SW A++AGY ++ +
Sbjct: 166 EECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRA 225
Query: 388 EDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
ED+L +F M R + R N S +SVL C+NL++L G+Q+H K+ G +
Sbjct: 226 EDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTS 285
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MYCKCG ++ A F E+ +DVI+WN MI+GYA HG G++A+ LFE MK+ G++P+
Sbjct: 286 LVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPN 345
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT V +L+AC HTG+ + G + F M YG+ HY+CMVDLL RAG L+ A +L+
Sbjct: 346 WITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLI 405
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
++MPF+P + +G LL A R+Y E AE AA + E P+NAG YV L+N+YA + +W
Sbjct: 406 RSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWA 465
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DVS+VR M+D V K GYSW+E+ +H F D LHP+ I+ L +LE ++K G
Sbjct: 466 DVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMG 525
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V LHDV E K ML HSEKLA+A+G+LS G +R+ KNLRVC DCH A K
Sbjct: 526 YVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGDCHTAAK 585
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKI R IILRD RFHHF G CSCGDYW
Sbjct: 586 LISKIEDREIILRDTTRFHHFRSGHCSCGDYW 617
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 207/403 (51%), Gaps = 31/403 (7%)
Query: 87 MPR--RSSVSYNAMISGYLLNGQLDPARQ---VFDQMPQRDLVS-WNVMISGYVR----- 135
MPR R V ++ + + G L A + V PQR + +N +++GY R
Sbjct: 1 MPRHLRLGVGARSLATAAIRRGDLAGAAEPEAVASTTPQRKTTADYNRLLAGYARAARPG 60
Query: 136 ---NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM--LEKNEISWNG 190
++ L+ AR+LF+ +P+ D VS+NT+LS + G AR +F M +N SWN
Sbjct: 61 GRRDRLLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNT 120
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE-VS 249
+L+ ++G + EA +F + +SWN+++ F + A+ F+ P ++ V
Sbjct: 121 MLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVL 180
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----- 304
W M++GY + ++ +A + FE PV+ + +W A+V+GYV+N + ++A +F M
Sbjct: 181 WTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDAD 240
Query: 305 --PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITH 358
P ++T+S +++ G + R++ + T + V + ++++ Y + G++
Sbjct: 241 VRPNESTLS--SVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDG 298
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A LF M D I+W A+I+GYA G +++ LF +MK G N F +VL+ C +
Sbjct: 299 ACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIH 358
Query: 419 LASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEA 460
+ G Q ++ +V G EA + ++ + C+ GS+E A
Sbjct: 359 TGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERA 401
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 167/306 (54%), Gaps = 18/306 (5%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ--RDLVSWNVMISGYVRNK 137
A H+F+ +PR +VSYN ++S + G + AR +F MP R++ SWN M+SG R+
Sbjct: 70 ARHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGLSRSG 129
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-NEISWNGLLAAYV 196
++ AR +F MP R+ +SWN M+S +A G AA F+ +K N + W +++ Y+
Sbjct: 130 AVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVLWTAMVSGYM 189
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD------EVSW 250
+G +E+A FE+ +VSWN+++ G+VK R DA W+F M VRD E +
Sbjct: 190 DSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTM-VRDADVRPNESTL 248
Query: 251 NTMITGYAQNNYLAEAQRLFE---EAPV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++++ G + + L +++ + + P+ + V T++VS Y + G +D A +F M
Sbjct: 249 SSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRI 308
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMI---TGYAQSGEITHARNL 362
++ ++WNAMI+GY A ELFE M + V +W T + T +G
Sbjct: 309 RDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQC 368
Query: 363 FDRMPQ 368
F+RM +
Sbjct: 369 FERMQE 374
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 14/266 (5%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
PA ++ WN ++ R+G A VF +MP R+S+S+NAM+S + G + A +
Sbjct: 109 PATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEEC 168
Query: 115 FDQMPQRD-LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
F+ P ++ V W M+SGY+ + + A FE MP R +VSWN +++GY +N A+ A
Sbjct: 169 FEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDA 228
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN-W--------EVVSWNSLMG 224
+F M+ ++ N + V G + + F + + W V + SL+
Sbjct: 229 LWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVS 288
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FT 280
+ K L A +F M +RD ++WN MI+GYA + EA LFE+ + V T
Sbjct: 289 MYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWIT 348
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPE 306
+ A+++ + G D F+ M E
Sbjct: 349 FVAVLTACIHTGMCDFGMQCFERMQE 374
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/613 (41%), Positives = 382/613 (62%), Gaps = 24/613 (3%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ Q N ++ +R+G A +F+SM RR +V++N+MISGY+ ++ ARQ+FD+MP+
Sbjct: 38 LNQSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPR 97
Query: 121 RDLVSWNVMISGYVR---NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
RD+VSWN+++SGY ++ + R LFE+MP+RD VSWNT++SGYA+NG D A ++F
Sbjct: 98 RDVVSWNLIVSGYFSCCGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLF 157
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+ M E N +S+N ++ ++ NG +E A F + + S +L+ G V+ L A
Sbjct: 158 NAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAG 217
Query: 238 IFDRMPVRDEV------SWNTMITGYAQNNYLAEAQRLFEEAPV-------------KDV 278
I D+ ++NT+I GY Q ++ EA+RLF+ P ++V
Sbjct: 218 ILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNV 277
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+W +M+ YV+ G + AR +FD M E++ SWN +I+ YVQ M+ A +LF M
Sbjct: 278 VSWNSMMMCYVKAGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSP 337
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+V SWN++I+G AQ G++ A++ F+RMP + ISW IIAGY ++ + +++LF EM+
Sbjct: 338 DVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQ 397
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
GER ++ +SV+S L L LGKQLH QLV + N+L+ MY +CG++
Sbjct: 398 LEGERPDKHTLSSVISVSTGLVDLYLGKQLH-QLVTKTVLPDSPINNSLITMYSRCGAIV 456
Query: 459 EAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+A F EI + KDVI+WN MI GYA HG +AL LF+ MK + I P IT + +L+AC
Sbjct: 457 DACTVFNEIKLYKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNAC 516
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+H GLVE+G F SM DYG+ P +H+ +VD+LGR G+L EA +L+ MPF+PD A
Sbjct: 517 AHAGLVEEGWRQFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAV 576
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
WGALLGACR++ ELA AA+ + +EPE++ YVLL N+YA G+W D VR+ M +
Sbjct: 577 WGALLGACRVHNNVELALVAADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEE 636
Query: 638 RGVKKVTGYSWLE 650
+ VKK GYSW++
Sbjct: 637 KNVKKQAGYSWVD 649
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 172/595 (28%), Positives = 272/595 (45%), Gaps = 101/595 (16%)
Query: 6 RLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWN 65
R+R H S + + N SP N + ++ S++R D WN
Sbjct: 19 RIRCCHVSA-----SPTHNYNSSPLNQSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWN 73
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL---NGQLDPARQVFDQMPQRD 122
I+ +++ A +F+ MPRR VS+N ++SGY + ++ R++F+ MPQRD
Sbjct: 74 SMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSGYFSCCGSRFVEEGRRLFELMPQRD 133
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
VSWN +ISGY +N + A LF MP+ + VS+N +++G+ NG ++A F M E
Sbjct: 134 CVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPE 193
Query: 183 KNEIS-------------------------------------WNGLLAAYVQNGRIEEAC 205
+ S +N L+A Y Q G +EEA
Sbjct: 194 HDSTSLCALISGLVRNGELDLAAGILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEAR 253
Query: 206 MLF-----------ESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
LF E K + VVSWNS+M +VK + A+ +FDRM RD SWNT
Sbjct: 254 RLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRMVERDNCSWNT 313
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
+I+ Y Q + + EA +LF E P DV +W +++SG Q G ++ A+ F+ MP KN +SW
Sbjct: 314 LISCYVQISNMEEASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISW 373
Query: 313 NAMIAGYVQTKRMDMARELFEAM----------TCKNVASW------------------- 343
N +IAGY + + A +LF M T +V S
Sbjct: 374 NTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVSTGLVDLYLGKQLHQLVTK 433
Query: 344 ---------NTMITGYAQSGEITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRL 393
N++IT Y++ G I A +F+ + + D I+W A+I GYA G + ++L L
Sbjct: 434 TVLPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGSAAEALEL 493
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYC 452
F MKR F SVL+ CA+ +E G +Q + G E +L+ +
Sbjct: 494 FKLMKRLKIHPTYITFISVLNACAHAGLVEEGWRQFKSMINDYGIEPRVEHFASLVDILG 553
Query: 453 KCGSVEEAYHAFEEIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+ G ++EA + K D W ++ H + AL+ +++ + ++P+
Sbjct: 554 RQGQLQEAMDLINTMPFKPDKAVWGALLGACRVHNNVELALVAADAL--IRLEPE 606
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/647 (40%), Positives = 380/647 (58%), Gaps = 64/647 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+N ++ R+G D A +F+ MP R++VS+NAMI+ +G++ AR +FD+MP RD
Sbjct: 52 YNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDE 111
Query: 124 VSW--------------------------------NVMISGYVRNKSLSAARNLFEMMPK 151
SW N MISGY +N A L MP
Sbjct: 112 FSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPA 171
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
D+VSWN+ L+G Q+G A + FD M+ K+ SWN +LA +V+ G + A F
Sbjct: 172 PDLVSWNSALAGLTQSGEMVRAVQFFDEMV-KDMTSWNLMLAGFVRTGDLNAASSFFAKI 230
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+ V+SW +L+ G+ + R+ DA+ +FDRMP R+ V+WN M+ GY + + EA +LF+
Sbjct: 231 ESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFD 290
Query: 272 EAPVKDVFTWTAMVSG-------------------------------YVQNGKVDEARMI 300
E P+K+ +WT ++SG Y+Q D+AR I
Sbjct: 291 EMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRI 350
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
FD M +TV WN MI+GYVQ ++ A LF+ M K++ SWNTMI GYAQ G++ A
Sbjct: 351 FDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAI 410
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+F RM + + +SW ++I+G+ Q+ D+L F+ M+R R + S + S L CANLA
Sbjct: 411 GIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLA 470
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
L +G+QLH LV+ G F GNAL+ Y KCG + EA F+E+V KD++SWN +I
Sbjct: 471 VLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALID 530
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYA +G G +A+ +F M+ G++PD++T VGILSACSH GL+++G +FYSM ++Y +
Sbjct: 531 GYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLK 590
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P ++HY CMVDLLGRAG+L+EA L++ M +P+A WGALLGAC ++ ELA+ AAE
Sbjct: 591 PVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAER 650
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+ E+EP A YVLLSN+ A +G+W + K R ++++GV K G +
Sbjct: 651 LSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKPPGLA 697
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 203/374 (54%), Gaps = 8/374 (2%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN+ + +R G ++A F + + +S+ +++GY G++ AR +FD+MP
Sbjct: 203 DMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMP 262
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+R++V+WNVM+ GYV + A LF+ MP ++ +SW T++SG A+ G A+ + D+
Sbjct: 263 ERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDK 322
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M + L+ Y+Q ++A +F+ + V WN+++ G+V+ L +A +F
Sbjct: 323 MSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLF 382
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
RMP +D VSWNTMI GYAQ+ + +A +F ++ +W +++SG+VQN + +A
Sbjct: 383 QRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALH 442
Query: 300 IFDAMPE-KNTVSWN---AMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYA 351
F M N W+ + + + + R+L + + + N +I+ YA
Sbjct: 443 HFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYA 502
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G I A+ +FD M D +SW A+I GYA +G +++ +F EM+ G R + F
Sbjct: 503 KCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVG 562
Query: 412 VLSTCANLASLELG 425
+LS C++ ++ G
Sbjct: 563 ILSACSHAGLIDEG 576
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 186/356 (52%), Gaps = 23/356 (6%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N +T A++ LA A+RLF+ P+++ T+ AM+S ++G++DEAR +FD MP +NTV
Sbjct: 22 NKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTV 81
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
SWNAMIA R+ AR LF+ M ++ SW M++ YA+ G++ AR++ DRMP
Sbjct: 82 SWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDK 141
Query: 371 CIS-WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
C + + A+I+GYA++G +D+++L EM + + S L+ + Q
Sbjct: 142 CTACYNAMISGYAKNGRFDDAMKLLREMPAP----DLVSWNSALAGLTQSGEMVRAVQFF 197
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
++VK N +L + + G + A F +I +VISW T++ GY R G
Sbjct: 198 DEMVK-----DMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIA 252
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
DA LF+ M + ++ + G + H +E+ + F M I NS +T +
Sbjct: 253 DARDLFDRMPERNVVAWNVMLDGYV----HLSPIEEACKLFDEMP-----IKNSISWTTI 303
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ L RAG+L EA++L+ M F AA + G Y + +A+ A + ME
Sbjct: 304 ISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHG----YLQRNMADDARRIFDGME 355
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 44/319 (13%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK----- 398
N +T A+SG++ AR LFD MP + +++ A+++ A+ G +++ LF M
Sbjct: 22 NKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTV 81
Query: 399 -------------RYGER---LNRSP------FTSVLSTCANLASLELGKQLHGQLVKVG 436
R + +R P +T ++S A LEL + + ++
Sbjct: 82 SWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDK 141
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
A C+ NA++ Y K G ++A E+ D++SWN+ +AG + G A+ F+
Sbjct: 142 CTA-CY--NAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFD 198
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M D + +L+ TG + + +F + PN + +++ RA
Sbjct: 199 EMVK-----DMTSWNLMLAGFVRTGDLNAASSFFAKIES-----PNVISWVTLLNGYCRA 248
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
GR+ +A++L MP E + W +L Y E+A ++ EM +N+ + +
Sbjct: 249 GRIADARDLFDRMP-ERNVVAWNVMLDG---YVHLSPIEEACKLFDEMPIKNSISWTTII 304
Query: 617 NLYAASGRWGDVSKVRLKM 635
+ A +G+ + + KM
Sbjct: 305 SGLARAGKLQEAKDLLDKM 323
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/661 (40%), Positives = 383/661 (57%), Gaps = 42/661 (6%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
+L + N D AR IFD++ + + +L AY QN R+ EA LF +VVSW
Sbjct: 61 LLFHHLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSW 120
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--EEAPVKD 277
NS++ G + + A+ +FD MP R VSW T++ G + + EA+ LF E +D
Sbjct: 121 NSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRD 180
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
V W AM+ GY NG+VD+A +F MP ++ +SW++MIAG + + A LF M
Sbjct: 181 VAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVA 240
Query: 338 KNVA-----------------SWN-----------------------TMITGYAQSGEIT 357
V +W +++T YA ++
Sbjct: 241 SGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQME 300
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F + + W A++ GY + ++L +F EM R N S FTS L++C
Sbjct: 301 AACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCC 360
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L +E GK +H VK+G E+G +VG +L+VMY KCG V +A + F+ I +K+V+SWN+
Sbjct: 361 GLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNS 420
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I G A+HG G AL LF M G+ PD IT+ G+LSACSH+G+++K +F +
Sbjct: 421 VIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKR 480
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
V +HYT MVD+LGR G L+EA+ ++ +MP + ++ W ALL ACR + +LA++A
Sbjct: 481 SVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRA 540
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
A IFE+EP+ + YVLLSNLYA+S RW +V+ +R KM+ GV K G SWL ++ + H
Sbjct: 541 ANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHK 600
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP ++IY LE L KLK+ G+V + LHDV E+KE ML YHSE+LA+A
Sbjct: 601 FLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIA 660
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G+LS G I VMKNLRVC DCHNAIK ++KIV R I++RD++RFH F G CSCGDY
Sbjct: 661 FGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDY 720
Query: 778 W 778
W
Sbjct: 721 W 721
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/604 (23%), Positives = 262/604 (43%), Gaps = 84/604 (13%)
Query: 38 KKTLKRHLNSKSRNKPKPAGDW----DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV 93
K L HLN++S ++ + D + + + + + +N A+ +F +P + V
Sbjct: 59 KYLLFHHLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVV 118
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--K 151
S+N++I G L G + AR++FD+MP+R +VSW ++ G +R + A LF M
Sbjct: 119 SWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMD 178
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES- 210
RDV +WN M+ GY NG D A ++F +M ++ ISW+ ++A NG+ E+A +LF
Sbjct: 179 RDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDM 238
Query: 211 ----------------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
A ++ +W + +LGD W F DE +++
Sbjct: 239 VASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGD--WHF------DEFVSASLV 290
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV---- 310
T YA + A R+F E K V WTA+++GY N K EA +F M + V
Sbjct: 291 TFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNES 350
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRM 366
S+ + + + ++ + + A + S +++ Y++ G ++ A +F +
Sbjct: 351 SFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGI 410
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ + +SW ++I G AQ G +L LF +M R G + T +LS C++ L+
Sbjct: 411 NEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQ--- 467
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+A CF Y + V + + +M+ R G
Sbjct: 468 -----------KARCFF----------------RYFGQKRSVTLTIEHYTSMVDVLGRCG 500
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNS 543
++A + SM +K + + + +LSAC S+ L ++ + + D S
Sbjct: 501 ELEEAEAVVMSMP---MKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDC-----S 552
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMP----FEPDAATWGALLGACRLYGKTELAEKAAE 599
Y + +L + R E + + M + ++W L G + + + AE
Sbjct: 553 AAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAE 612
Query: 600 VIFE 603
I++
Sbjct: 613 KIYQ 616
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/832 (34%), Positives = 443/832 (53%), Gaps = 107/832 (12%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY 95
P + TL ++L ++ PKP+ + + H+ + H+ + ++
Sbjct: 3 PYRATLFQNLVLRNSPAPKPSLN----------SNHLIDA------HIVKTGFNPNTCRS 46
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ +L G L A QVFDQMP ++ +S N+MISG+++ LS AR LF+ M +R V
Sbjct: 47 NFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAV 106
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY----VQNGRIEEACML 207
SW ++ GY Q+ + A R++ M +E + ++ LL+ + +N ++ +
Sbjct: 107 SWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHV 166
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + ++ NSL+ + K L A +F M +D V++N+++TGY+ EA
Sbjct: 167 IKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAI 226
Query: 268 RLFEEAP---------------------------------------VKDVFTWTAMVSGY 288
LF E V +VF A++ Y
Sbjct: 227 ELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYY 286
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGY---------------VQTKRMDMARELFE 333
++ +VDE +F MPE + +S+N +I Y +Q R D R F
Sbjct: 287 SKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD--RRQFP 344
Query: 334 AMTCKNVASW--------------------------NTMITGYAQSGEITHARNLFDRMP 367
T ++A+ N ++ YA+ A+ +FD +
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ W A+I+ Y Q G E+ + +F +M+R G +++ F S+L CANLAS+ LG+Q
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ 464
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
LH L++ GF + + G+ALL Y KCG + +A +F E+ +++ +SWN +I+ YA++G
Sbjct: 465 LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGN 524
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
L F+ M G KPD ++ + +LSACSH G VE+ +F SM + Y V P +HYT
Sbjct: 525 VDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYT 584
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP- 606
MVD+L R GR DEA+ LM MPFEP W ++L +CR++ ELA+KAA+ +F ME
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDL 644
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+A Y+ +SN+YA +G+W +V+KV+ MRDRGV+KV YSW+E++++ H FS D HP
Sbjct: 645 RDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHP 704
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
E +I + L ++++ G+ T LHDV E K L+YHSE+ A+A+ +++ P G
Sbjct: 705 EMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDG 764
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PI VMKNLR C DCH AIK IS+IV R II+RD++RFHHF G CSCGDYW
Sbjct: 765 SPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/627 (39%), Positives = 370/627 (59%), Gaps = 45/627 (7%)
Query: 197 QNGRIEEAC-MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW----N 251
Q R++EA +L + +++L+ V+ + L + + + V N
Sbjct: 67 QQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISN 126
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
++ YA+ L +AQ LF+E +D+ +W M+ GY + G++++AR +FD MP+++ S
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFS 186
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVAS----------------------------- 342
WNA I+GYV + A ELF M +S
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246
Query: 343 -----------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
W+ ++ Y + G + AR +FD+M D +SW +I + G E+
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGF 306
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF ++ + G R N F VL+ CA+ A+ LGK++HG ++ G++ G F +AL+ MY
Sbjct: 307 LLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMY 366
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG+ A F E+ D++SW ++I GYA++G +AL FE + G KPD +T V
Sbjct: 367 SKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYV 426
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+LSAC+H GLV+KG EYF+S+ +G++ + HY C++DLL R+GR EA+N++ NMP
Sbjct: 427 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPV 486
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
+PD W +LLG CR++G ELA++AA+ ++E+EPEN Y+ L+N+YA +G W +V+ V
Sbjct: 487 KPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANV 546
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R M + G+ K G SW+E++ +VH F VGDT HP+ I+ +L EL K+K++G+V T
Sbjct: 547 RKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDT 606
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
VLHDV EE+KE L YHSEKLAV +GI+S P G PI+V KNLR C DCH AIK+ISKI
Sbjct: 607 NFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKI 666
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
V R I +RD+NRFH F GSCSC DYW
Sbjct: 667 VQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 158/362 (43%), Gaps = 49/362 (13%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G D+ WN I + + G + A +F+ MP+R + S+NA ISGY+ + Q A ++F
Sbjct: 149 GHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFR 208
Query: 117 QMPQRDLVSWNVM--------------------ISGYVRNKSLSAARNLFEMMPKRDVVS 156
M + + S N I GY+ L+ D V
Sbjct: 209 VMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNL-----------DEVV 257
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
W+ +L Y + G D AR IFD+M +++ +SW ++ ++GR EE +LF V
Sbjct: 258 WSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGV 317
Query: 217 VSWNSLMGGFVK------QKRLGDAKWIFDRMPVRDEVSW--NTMITGYAQNNYLAEAQR 268
G + + LG + D S+ + ++ Y++ A+R
Sbjct: 318 RPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARR 377
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKR 324
+F E D+ +WT+++ GY QNG+ DEA F+ + + T V++ +++
Sbjct: 378 VFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGL 437
Query: 325 MDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
+D E F ++ K+ + +I A+SG A N+ D MP + D WA+++
Sbjct: 438 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLL 497
Query: 379 AG 380
G
Sbjct: 498 GG 499
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 13/153 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVF----NSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ W I + +NG D ALH F S + V+Y ++S G +D + F
Sbjct: 386 DLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYF 445
Query: 116 DQMPQRDLV-----SWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGY 169
+ ++ + + +I R+ A N+ + MP K D W ++L G +G
Sbjct: 446 HSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGN 505
Query: 170 ADAARRIFDRMLE---KNEISWNGLLAAYVQNG 199
+ A+R + E +N ++ L Y G
Sbjct: 506 LELAKRAAKALYEIEPENPATYITLANIYANAG 538
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/563 (42%), Positives = 355/563 (63%), Gaps = 12/563 (2%)
Query: 128 VMISGYVRNKS-----------LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
V +SG+V++ + +S AR LF+ P RDVVSW +++ YA+ G AR +
Sbjct: 29 VDVSGHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARAL 88
Query: 177 FDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
FDR +N ++W LL+ Y + GR++EA LF+ VVSWN+++ + R+ DA
Sbjct: 89 FDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDA 148
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
+FD MPVRD SWN ++ ++ + +A++LF+ P ++V WT MV+G ++G VD
Sbjct: 149 WTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVD 208
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE 355
EAR +FD MPE+N VSWNAMI+GY + R+D A +LF M +++ASWN MITG+ Q +
Sbjct: 209 EARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRD 268
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ A++LFD+MP+ + I+W ++ GY QS SE +L++F M G R N+ F +
Sbjct: 269 LERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDA 328
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C+NLA L G+Q+H + K F+ F+ + L+ +Y KCG + A F+ +KDVISW
Sbjct: 329 CSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISW 388
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N MIA YA HG G +A+ L+E M+ G KP+D+T VG+LSACSH+GLV++G F M +
Sbjct: 389 NGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVK 448
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
D + +HYTC++DL RAGRL +A+ L+ + EP + W ALLG C +G + +
Sbjct: 449 DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGD 508
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AA + E EP NAG Y LL N+YA++G+W + +K+R +M DRG+KK G SW+EV+NKV
Sbjct: 509 LAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKV 568
Query: 656 HTFSVGDTLHPEKDRIYAYLEEL 678
H F D H E D I + L+++
Sbjct: 569 HVFVSRDKSHSESDLINSLLQDI 591
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/443 (31%), Positives = 235/443 (53%), Gaps = 17/443 (3%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM-PRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D D+ W + + R G A +F+ RR+ V++ A++SGY G++D A +F
Sbjct: 63 DRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQ 122
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+MP+R++VSWN M+ Y + A LF+ MP RD SWN +L+ ++G D AR++
Sbjct: 123 RMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKL 182
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
FDRM E+N ++W ++A ++G ++EA LF+ VVSWN+++ G+ + R+ +A
Sbjct: 183 FDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARNHRIDEAH 242
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+F +MP RD SWN MITG+ Q+ L AQ LF++ P ++V TWT M++GY+Q+ + +
Sbjct: 243 DLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSET 302
Query: 297 ARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG--- 349
A IF+ M N V++ + + +++ + M CK ++T I
Sbjct: 303 ALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQ-MICKTSFQFDTFIESTLM 361
Query: 350 --YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA+ GEI AR +FD + D ISW +IA YA G +++ L+ +M+ G + N
Sbjct: 362 NLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDV 421
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC----KCGSVEEAYHA 463
+ +LS C++ ++ G ++ +VK A L+ C + G + H
Sbjct: 422 TYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHF 481
Query: 464 FEEIVDKDVISWNTMIAGYARHG 486
+ V+ WN ++ G HG
Sbjct: 482 LK--VEPSSTVWNALLGGCNSHG 502
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 200/393 (50%), Gaps = 48/393 (12%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
+P ++ W ++ + R G D A +F MP R+ VS+N M+ Y G++ A
Sbjct: 91 RPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWT 150
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+FD MP RD SWN++++ VR+ ++ AR LF+ MP+R+V++W TM++G A++G D A
Sbjct: 151 LFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEA 210
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
R +FD M E+N +SWN +++ Y +N RI+EA LF ++ SWN ++ GF++ + L
Sbjct: 211 RALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLE 270
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----------------- 276
A+ +FD+MP R+ ++W TM+ GY Q+ A ++F V+
Sbjct: 271 RAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACS 330
Query: 277 ----------------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
D F + +++ Y + G++ AR +FD EK+ +SWN
Sbjct: 331 NLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNG 390
Query: 315 MIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
MIA Y A L+E M K N ++ +++ + SG + +F+ M +
Sbjct: 391 MIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDR 450
Query: 371 CIS-----WAAIIAGYAQSGYSEDSLRLFIEMK 398
I+ + +I +++G D+ RL +K
Sbjct: 451 SIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLK 483
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 301/843 (35%), Positives = 439/843 (52%), Gaps = 129/843 (15%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
R ++ + R CC A F+ +P VS++++++ Y NG A Q F M
Sbjct: 39 FRNHLISFYSKCRRPCC--ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRA 96
Query: 121 RDLVSWNV---MISGYVRNKSLSAARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARR 175
+ ++ V + L A + M DV N +++ Y G+ D ARR
Sbjct: 97 EGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARR 156
Query: 176 IFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKA---------------------- 212
+F+ E+N +SWNGL++AYV+N + +A +F
Sbjct: 157 VFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 216
Query: 213 -----------------NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ +V + N+L+ ++K R+ A IF++MP D VSWN +I+
Sbjct: 217 NIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALIS 276
Query: 256 GYAQNNYLAEAQRLFEEAP----VKDVFTWTA---------------------------- 283
G N + A L + V +VFT ++
Sbjct: 277 GCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADS 336
Query: 284 -------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE--- 333
+V Y +N +D+AR +FD M ++ + NA+I+G R D A LF
Sbjct: 337 DDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELR 396
Query: 334 -----------AMTCKNVASW-------------------------NTMITGYAQSGEIT 357
A K+ AS N +I Y + ++
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLS 456
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF--TSVLST 415
A +F+ D I+ ++I +Q + E +++LF+EM R G L PF +S+L+
Sbjct: 457 DANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG--LEPDPFVLSSLLNA 514
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA+L++ E GKQ+H L+K F + F GNAL+ Y KCGS+E+A AF + ++ V+SW
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 574
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+ MI G A+HG GK AL LF M GI P+ ITM +L AC+H GLV++ YF SM
Sbjct: 575 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+G+ +HY+CM+DLLGRAG+LD+A L+ +MPF+ +A+ WGALLGA R++ EL +
Sbjct: 635 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGK 694
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AAE +F +EPE +G +VLL+N YA++G W +V+KVR M+D +KK SW+EV++KV
Sbjct: 695 LAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKV 754
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
HTF VGD HP IYA L EL + + GFV + + LHD+ EKE +L +HSE+LA
Sbjct: 755 HTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLA 814
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
VA+ +LS P G PIRV KNLR+C DCH A K ISKIV R II+RD NRFHHF G+CSCG
Sbjct: 815 VAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCG 874
Query: 776 DYW 778
DYW
Sbjct: 875 DYW 877
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 174/435 (40%), Gaps = 95/435 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + +M+ G D A +F MP VS+NA+ISG +LNG A ++ Q
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPKRDVVSWNTMLSG----YAQNGY 169
M LV +S ++ S + A R + M K + S + + G YA+N +
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-------------------ES 210
D AR++FD M ++ I N L++ GR +EA LF +S
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Query: 211 KANWEVVSW--------------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
A+ E S N L+ + K L DA +F+ D ++
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIAC 473
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVK---------------------------------- 276
+MIT +Q ++ A +LF E K
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 277 -----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
D F A+V Y + G +++A + F ++PE+ VSW+AMI G Q A EL
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593
Query: 332 FEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYA 382
F M + + + +++ +G + A+ F+ M + I ++ +I
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653
Query: 383 QSGYSEDSLRLFIEM 397
++G +D++ L M
Sbjct: 654 RAGKLDDAMELVNSM 668
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 302/852 (35%), Positives = 447/852 (52%), Gaps = 124/852 (14%)
Query: 26 LQSPANTNPYPSKKTLKRHLNSKSRNKP--------KPAGDWDIRQWNVAITTHMRNGCC 77
LQ P TNP P L + +N+ +K D++ +++ + +R
Sbjct: 23 LQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSF 82
Query: 78 DSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISG 132
D V + + SV+ N++IS Y GQ + A +F M RDL+SW+ M+S
Sbjct: 83 DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSC 142
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTML-SGYAQNGYADAARRIFDRMLEKNEISWNG- 190
+ N M R ++++ M+ +GY N Y AA R E G
Sbjct: 143 FANNN-----------MGFRALLTFVDMIENGYYPNEYCFAAA---TRACSTAEFVSVGD 188
Query: 191 -LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK-RLGDAKWIFDRMPVRDEV 248
+ V+ G ++ +V L+ FVK + L A +F++MP R+ V
Sbjct: 189 SIFGFVVKTGYLQS-----------DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAV 237
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQ-------------- 290
+W MIT Q Y EA LF E + D FT + ++S
Sbjct: 238 TWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297
Query: 291 ------------------------NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+G + AR IFD + + N SW AMI GYVQ D
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYD 357
Query: 327 M-ARELFEAM-----------------TCKNVASW----------------------NTM 346
A +LF M C N+A+ N++
Sbjct: 358 EEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSL 417
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I+ YA+SG I AR FD + + + IS+ +I YA++ SE++L LF E++ G +
Sbjct: 418 ISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASA 477
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
F S+LS A++ ++ G+Q+H +++K G + V NAL+ MY +CG++E A+ FE+
Sbjct: 478 FTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFED 537
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ D++VISW ++I G+A+HGF AL LF M G++P+ +T + +LSACSH GLV +G
Sbjct: 538 MEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEG 597
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
++F SM ++GVIP +HY CMVD+LGR+G L EA + +MP++ DA W LGACR
Sbjct: 598 WKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACR 657
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++G EL + AA++I E EP + Y+LLSNLYA++ +W +VS +R M+++ + K G
Sbjct: 658 VHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGC 717
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHM 706
SW+EV+NKVH F VGDT HP+ IY L+ L K+K+ G+V + VLHDV EE+KE +
Sbjct: 718 SWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKL 777
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
L HSEK+AVA+G++S +PIRV KNLR+C DCH+AIK+IS GR II+RD NRFHH
Sbjct: 778 LFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHH 837
Query: 767 FSGGSCSCGDYW 778
G CSC +YW
Sbjct: 838 IKDGRCSCNEYW 849
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 282/712 (39%), Positives = 413/712 (58%), Gaps = 24/712 (3%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF------DQMPQRDLVSWNVMISGYVRN 136
+F S P + Y+ M+ Y G + +F + PQ + + + ++G N
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ L + D N +L YA+NG D AR +F++M E+ WN +++
Sbjct: 116 MFHAYVLKLGHI---DDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
++G EA +LF +++W S++ G+ K L A+ FD MP R VSWN M +
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 257 YAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----N 308
YAQ EA LF EE D TW +S G A I + +K N
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ A++ + + +++AR +F+ + + +N +WN MI+ Y + G+++ AR LFD MP
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGK 426
+ D +SW ++IAGYAQ+G S S+ LF EM + + + SVLS C ++ +L+L
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+ + + + G N+L+ MY KCGSV +A+ F+ + +DV+S+NT+I+G+A +G
Sbjct: 413 WVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANG 472
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
GK+A+ L +M+ GI+PD +T +G+L+ACSH GL+ +G F S+ P HY
Sbjct: 473 HGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHY 527
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
CMVDLLGRAG LDEA+ L+++MP +P A +G+LL A R++ + L E AA +FE+EP
Sbjct: 528 ACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEP 587
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+N G YVLLSN+YA+ GRW DV +VR M+ G+KK G SW+E + +VH F+VGD H
Sbjct: 588 QNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHE 647
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ IY L ELE K+K+ GFV L DV EEEKE ML HSEKLA+ + +L G
Sbjct: 648 QSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVG 707
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IRV+KNLR+C DCH AIK ISK+ GR I++RDNNRFH FS G CSC DYW
Sbjct: 708 TTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 196/438 (44%), Gaps = 62/438 (14%)
Query: 17 HQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRN-------KPKPAGDWDIRQWNVAIT 69
H S+ + N P P L KS N K D IR N +
Sbjct: 81 HNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMFHAYVLKLGHIDDHFIR--NAILD 138
Query: 70 THMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVM 129
+ +NG D A ++F M R+ +N+MISG +G A +F+ MP R++++W M
Sbjct: 139 MYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSM 198
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NE 185
++GY + L +AR F+ MP+R VVSWN M S YAQ A +F +MLE+ ++
Sbjct: 199 VTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDD 258
Query: 186 ISW-----------------------------------NGLLAAYVQNGRIEEACMLF-E 209
+W LL + + G +E A +F E
Sbjct: 259 TTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDE 318
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
+ V+WN ++ + + +L A+ +FD MP RD VSWN+MI GYAQN A + L
Sbjct: 319 LGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIEL 378
Query: 270 FEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYV 320
F+E D T +++S G + + + D + EKN +N++I Y
Sbjct: 379 FKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYS 438
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAA 376
+ + A +F+ M ++V S+NT+I+G+A +G A L M + D +++
Sbjct: 439 KCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIG 498
Query: 377 IIAGYAQSGYSEDSLRLF 394
++ + +G + +F
Sbjct: 499 VLTACSHAGLLNEGKNVF 516
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/647 (37%), Positives = 384/647 (59%), Gaps = 63/647 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+N ++ R+G A +F+ +PRR++VS+NAMI+ +G++ AR +FD MP RD
Sbjct: 45 YNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDG 104
Query: 124 VSWNVMISGYVRNKSLSAARN--------------------------------LFEMMPK 151
SW +M+S Y R L AR+ L MP
Sbjct: 105 FSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPA 164
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
D++SWN++L G +NG A + FD M ++ +SWN +L YV+ G ++ A LF
Sbjct: 165 PDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGV 224
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+ VVSW +L+ G+ + R+G+A+ +FDR+P R+ +WN M++GY + +++ EA +LF
Sbjct: 225 PSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFT 284
Query: 272 EAPVKDVFTWTAMVS-------------------------------GYVQNGKVDEARMI 300
E P K+ +WT M+S GY+Q+ +D+AR+I
Sbjct: 285 EMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLI 344
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
FD + ++ V WN MI+GYV +D A LF+ M K++ SWNTMI GYA G++ A
Sbjct: 345 FDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAV 404
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+F +M Q + +SW ++I+G+ Q+G ++L+ F+ M+R +R + S + LS CA+LA
Sbjct: 405 GIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLA 464
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+L +G+Q H L + G+ F GNAL+ Y KCG + EA F+E+ D++SWN +I
Sbjct: 465 ALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALID 524
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYA +G G +A+ +F M+ ++PD++T VG+LSACSH GL+++G ++F SM +DY +
Sbjct: 525 GYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALR 584
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P ++HY CMVDLLGR+GRL EA +++ M +P+A WGA+LGACR++ ELA+ AAE
Sbjct: 585 PVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEK 644
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
++E+EP YVLLSN+ A +G+W + +R+ +++RGV K G +
Sbjct: 645 LYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPGLA 691
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N +T A++ LA A+RLF+ P ++ ++ AM+S ++G++ +AR +FD +P +NTV
Sbjct: 15 NQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTV 74
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
SWNAMIA R+ AR+LF+AM ++ SW M++ YA++GE+ AR+ DRMP
Sbjct: 75 SWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDK 134
Query: 371 CIS-WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
C + + A+I+GYA+ G +D++ L EM P ++S S+ +G +
Sbjct: 135 CTACYNAMISGYAKHGRFDDAVALLREM----------PAPDIIS----WNSVLVGLTRN 180
Query: 430 GQLVK-VGF----EAGCFVG-NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G++V+ V F A V N +L Y + G V+ A F + +V+SW T++ GY
Sbjct: 181 GEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYC 240
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
R G +A LF+ + + ++ + G L SH +E+ + F M NS
Sbjct: 241 RAGRIGEARELFDRIPDRNVAAWNVMLSGYLR-LSH---MEEAYKLFTEMPD-----KNS 291
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+T M+ L R G+L EA++L+ MPF+ AA + G Y ++++ + A +
Sbjct: 292 ISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHG----YLQSKMIDDARLIFDG 347
Query: 604 MEPENA 609
+E +A
Sbjct: 348 LEVRDA 353
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 281/749 (37%), Positives = 432/749 (57%), Gaps = 35/749 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM-PRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
D+ N + + G D A VF+ R++VS+N ++S Y+ N Q A QVF +M
Sbjct: 41 DVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 100
Query: 119 P----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYA 170
Q ++ +++ ++++ A R + M+ + +DV + N ++ Y + G
Sbjct: 101 VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-MLFESKANWEVVSWNSLMGGFVKQ 229
D A IF++M + + +SWN L++ V NG A +L + K++ V N M + +
Sbjct: 161 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP--NVFMLSSILK 218
Query: 230 KRLGDAKWIFDRM---------PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
G + R D+ ++ YA+N++L +A ++F+ +D+
Sbjct: 219 ACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLIL 278
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMT 336
W A++SG G+ DEA IF + ++ N + A++ + R++ A+
Sbjct: 279 WNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQV-HALA 337
Query: 337 CK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
K + N +I Y + ++ A +F+ D I+ ++I +Q + E ++
Sbjct: 338 EKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAI 397
Query: 392 RLFIEMKRYGERLNRSPF--TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+LF+EM R G L PF +S+L+ CA+L++ E GKQ+H L+K F + F GNAL+
Sbjct: 398 KLFMEMLRKG--LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 455
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
Y KCGS+E+A AF + ++ V+SW+ MI G A+HG GK AL LF M GI P+ IT
Sbjct: 456 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 515
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
M +L AC+H GLV++ YF SM +G+ +HY+CM+DLLGRAG+LD+A L+ +M
Sbjct: 516 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 575
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
PF+ +A+ WGALLGA R++ EL + AAE +F +EPE +G +VLL+N YA+SG W +V+
Sbjct: 576 PFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVA 635
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
KVR M+D +KK SW+EV++KVHTF VGD HP IY+ L+EL + + G++
Sbjct: 636 KVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIP 695
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
+ + LHD+ EKE +L +HSE+LAVA+ +LS P G PIRV KNLR+C DCH A K IS
Sbjct: 696 NVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFIS 755
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IV R II+RD NRFHHF G+CSCGDYW
Sbjct: 756 NIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 172/433 (39%), Gaps = 67/433 (15%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL----NGQLDPARQ 113
D D+ WN I+ + NG A+ + M V M+S L G D RQ
Sbjct: 172 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 231
Query: 114 VFDQMPQRDLVSWNVMISG----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ M + + S + + G Y +N L A +F+ M RD++ WN ++SG + G
Sbjct: 232 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGR 291
Query: 170 ADAARRIFDRMLEKN-EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW-------NS 221
D A IF + ++ ++ L A +E A + A E + + N
Sbjct: 292 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG 351
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----- 276
L+ + K L DA +F+ D ++ +MIT +Q ++ A +LF E K
Sbjct: 352 LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 411
Query: 277 ----------------------------------DVFTWTAMVSGYVQNGKVDEARMIFD 302
D F A+V Y + G +++A + F
Sbjct: 412 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 471
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITH 358
++PE+ VSW+AMI G Q A ELF M + + + +++ +G +
Sbjct: 472 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 531
Query: 359 ARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
A+ F+ M + I ++ +I ++G +D++ L M + N S + ++L
Sbjct: 532 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF---QANASVWGALL 588
Query: 414 STCANLASLELGK 426
ELGK
Sbjct: 589 GASRVHKDPELGK 601
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
+LG Q+H + GF + FV NAL+ MY G +++A F+E +++ +SWN +++
Sbjct: 24 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 83
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y ++ DA+ +F M GI+P + +++AC+ + ++ G + ++M G
Sbjct: 84 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ-VHAMVVRMGYEK 142
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+ +VD+ + GR+D A + + MP + D +W AL+ C L G +A E++
Sbjct: 143 DVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGHD---HRAIELL 198
Query: 602 FEMEPEN--AGMYVLLSNLYAASG 623
+M+ +++L S L A +G
Sbjct: 199 LQMKSSGLVPNVFMLSSILKACAG 222
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 282/712 (39%), Positives = 413/712 (58%), Gaps = 24/712 (3%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF------DQMPQRDLVSWNVMISGYVRN 136
+F S P + Y+ M+ Y G + +F + PQ + + + ++G N
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ L + D N +L YA+NG D AR +F++M E+ WN +++
Sbjct: 116 LFHAYVLKLGHI---DDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
++G EA +LF +++W S++ G+ K L A+ FD MP R VSWN M +
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 257 YAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----N 308
YAQ EA LF EE D TW +S G A I + +K N
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ A++ + + +++AR +F+ + + +N +WN MI+ Y + G+++ AR LFD MP
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGK 426
+ D +SW ++IAGYAQ+G S S+ LF EM + + + SVLS C ++ +L+L
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+ + + + G N+L+ MY KCGSV +A+ F+ + +DV+S+NT+I+G+A +G
Sbjct: 413 WVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANG 472
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
GK+A+ L +M+ GI+PD +T +G+L+ACSH GL+ +G F S+ P HY
Sbjct: 473 HGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHY 527
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
CMVDLLGRAG LDEA+ L+++MP +P A +G+LL A R++ + L E AA +FE+EP
Sbjct: 528 ACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEP 587
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+N G YVLLSN+YA+ GRW DV +VR M+ G+KK G SW+E + +VH F+VGD H
Sbjct: 588 QNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHE 647
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ IY L ELE K+K+ GFV L DV EEEKE ML HSEKLA+ + +L G
Sbjct: 648 QSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVG 707
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IRV+KNLR+C DCH AIK ISK+ GR I++RDNNRFH FS G CSC DYW
Sbjct: 708 TTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 196/438 (44%), Gaps = 62/438 (14%)
Query: 17 HQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRN-------KPKPAGDWDIRQWNVAIT 69
H S+ + N P P L KS N K D IR N +
Sbjct: 81 HNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLFHAYVLKLGHIDDHFIR--NAILD 138
Query: 70 THMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVM 129
+ +NG D A ++F M R+ +N+MISG +G A +F+ MP R++++W M
Sbjct: 139 MYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSM 198
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NE 185
++GY + L +AR F+ MP+R VVSWN M S YAQ A +F +MLE+ ++
Sbjct: 199 VTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDD 258
Query: 186 ISW-----------------------------------NGLLAAYVQNGRIEEACMLF-E 209
+W LL + + G +E A +F E
Sbjct: 259 TTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDE 318
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
+ V+WN ++ + + +L A+ +FD MP RD VSWN+MI GYAQN A + L
Sbjct: 319 LGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIEL 378
Query: 270 FEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYV 320
F+E D T +++S G + + + D + EKN +N++I Y
Sbjct: 379 FKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYS 438
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAA 376
+ + A +F+ M ++V S+NT+I+G+A +G A L M + D +++
Sbjct: 439 KCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIG 498
Query: 377 IIAGYAQSGYSEDSLRLF 394
++ + +G + +F
Sbjct: 499 VLTACSHAGLLNEGKNVF 516
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/552 (44%), Positives = 359/552 (65%), Gaps = 2/552 (0%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQ 197
+S AR LF+ MP RDVVSW M++ YA+ G AR +FDR +N ++W LL+ Y +
Sbjct: 57 VSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYAR 116
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
R++EA LFE A VVSWN+++ + R+ DA +F+RMPVRD SWN ++ G
Sbjct: 117 ARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGL 176
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
++ L A+++FE PV+DV +WT M+SG +NG VD+A ++FDAMPE+N VSWNAMI+
Sbjct: 177 VRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMIS 236
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
GY + R++ A +LF M ++VASWN MITG+ Q+ ++ AR LFD MP+ + I+W +
Sbjct: 237 GYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTM 296
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+ GY Q SE +L+LF M G + N+ F L C+NLA+L G+Q+H + K
Sbjct: 297 MNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPS 356
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ FV + L+ +Y KCG + A + F+ ++KD+ISWN +IA YA HGFG +A+ L+++
Sbjct: 357 QFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKN 416
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ G KP+D T VG+LSACSH GLV++G + F SM +D ++ +HYTC+VDL RAG
Sbjct: 417 MQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAG 476
Query: 558 RLDEAQNLMKNMPFEPDAAT-WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
RL++A+ L+ +P ++T W ALLG C +G + + AA+ + E EP+NAG Y LL
Sbjct: 477 RLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLC 536
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+YA++G+W + +++R +M RG+KK G SW+EV NKVH F D H E D I L+
Sbjct: 537 NIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINDLLQ 596
Query: 677 ELEFKLKQDGFV 688
++ ++ G V
Sbjct: 597 DIHRIMRMAGTV 608
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 240/455 (52%), Gaps = 43/455 (9%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISGY 133
G A +F+ MP R VS+ AM++ Y G L AR +FD+ +R++V+W ++SGY
Sbjct: 55 GRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGY 114
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
R + + A LFE M +R+VVSWNTML Y G + A +F+RM ++ SWN LL
Sbjct: 115 ARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLC 174
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
V++G +E A +FE +V+SW +++ G + + DA +FD MP R+ VSWN M
Sbjct: 175 GLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAM 234
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
I+GYA+N+ + EA LF + P++DV +W M++G++QN + AR +FD MP++N ++W
Sbjct: 235 ISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWT 294
Query: 314 AMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW------------- 343
M+ GY+Q + +MA +LF M C N+A+
Sbjct: 295 TMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKT 354
Query: 344 ---------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+T++ YA+ GEI ARN+FD + D ISW IIA YA G+ +++ L+
Sbjct: 355 PSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLY 414
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC-K 453
M+ G + N + + +LS C++ ++ G ++ +VK LV C +
Sbjct: 415 KNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSR 474
Query: 454 CGSVEEAYHAFE--EIVDKDVISWNTMIAGYARHG 486
G +E+A +I W+ ++ G HG
Sbjct: 475 AGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHG 509
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 13/388 (3%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
+P ++ W ++ + R D A +F M R+ VS+N M+ Y G+++ A
Sbjct: 97 RPDARRNVVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASA 156
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+F++MP RD SWN+++ G VR+ SL AR +FE MP RDV+SW TM+SG A+NG D A
Sbjct: 157 LFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDA 216
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
+FD M E+N +SWN +++ Y +N RIEEA LF +V SWN ++ GF++ K L
Sbjct: 217 WVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLK 276
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYV 289
A+ +FD MP R+ ++W TM+ GY Q A +LF V+ + T+ +
Sbjct: 277 SARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACS 336
Query: 290 QNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+ E +MI + +T + ++ Y + + +AR +F+ K++ SWN
Sbjct: 337 NLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNG 396
Query: 346 MITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+I YA G A +L+ M ++ + ++ +++ + +G ++ L++F M +
Sbjct: 397 IIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDN 456
Query: 402 ERLNRSP-FTSVLSTCANLASLELGKQL 428
+ R +T ++ C+ LE K+L
Sbjct: 457 SIVVRDEHYTCLVDLCSRAGRLEDAKRL 484
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 203/454 (44%), Gaps = 87/454 (19%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE--KN 308
N + A +++A+RLF+ P +DV +WTAMV+ Y + G + EAR++FD P+ +N
Sbjct: 45 NWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR-PDARRN 103
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
V+W A+++GY + +R+D A LFE M +NV SWNTM+ Y G + A LF+RMP
Sbjct: 104 VVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPV 163
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D SW ++ G +SG E + ++F R P V+S ++ L +
Sbjct: 164 RDAGSWNILLCGLVRSGSLERARKMF----------ERMPVRDVMSWTTMISGLARNGSV 213
Query: 429 HGQ--LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY---- 482
L E NA++ Y + +EEA F ++ +DV SWN MI G+
Sbjct: 214 DDAWVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNK 273
Query: 483 ----ARHGF-----------------------GKDALMLFESMKTVGIKPDDITMVGILS 515
AR F + AL LF M GI+P+ +T +G L
Sbjct: 274 DLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLD 333
Query: 516 ACSHTGLVEKGTEY---------------------FYSMNRDYGVIPNSKHYTCMVDLLG 554
ACS+ + +G + Y+ + + N ++ DL+
Sbjct: 334 ACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLIS 393
Query: 555 RAGRLD---------EAQNLMKNMP---FEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
G + EA +L KNM ++P+ AT+ LL AC G L ++ ++
Sbjct: 394 WNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAG---LVDEGLKIFE 450
Query: 603 EMEPENAGM-----YVLLSNLYAASGRWGDVSKV 631
M +N+ + Y L +L + +GR D ++
Sbjct: 451 SMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRL 484
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/680 (38%), Positives = 390/680 (57%), Gaps = 62/680 (9%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV--- 216
+L Y Q G + ARR+FD+M E+N SW ++ Y G EE LF N V
Sbjct: 51 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 110
Query: 217 -VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG-----YAQNNYLAEAQRLF 270
+ + + K K ++D M + N+ + G + + + A+R F
Sbjct: 111 HFVFPKVFKACSELKNYRVGKDVYDYM-LSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 169
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVS------------- 311
EE KDVF W MVSGY G+ +A +F M P T++
Sbjct: 170 EEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLR 229
Query: 312 ---------------------WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM--IT 348
N+++ Y + + +++AR F + ++ SWN M +T
Sbjct: 230 HGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVT 289
Query: 349 GYAQSGEITHARNLFDRM----------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
G+ Q G+ A F RM D + W +II+ AQSG S ++L L EM
Sbjct: 290 GFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 349
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+N S L C+ LA+L GK++H +++ G + F+ N+L+ MY +CGS++
Sbjct: 350 LSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQ 409
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
++ F+ + +D++SWN MI+ Y HGFG DA+ LF+ +T+G+KP+ IT +LSACS
Sbjct: 410 KSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS 469
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H+GL+E+G +YF M +Y + P + Y CMVDLL RAG+ +E ++ MPFEP+AA W
Sbjct: 470 HSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVW 529
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
G+LLGACR++ +LAE AA +FE+EP+++G YVL++N+Y+A+GRW D +K+R M++R
Sbjct: 530 GSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKER 589
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
GV K G SW+EV+ K+H+F VGDT HP ++I A +E L F +K+ G+V T VL DV
Sbjct: 590 GVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDV 649
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
E+EKE L HSEK+A+A+G++S AG P+R++KNLRVC DCH+A K ISK+ R II+
Sbjct: 650 DEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIM 709
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RDN RFHHF G CSCGDYW
Sbjct: 710 RDNYRFHHFVDGVCSCGDYW 729
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 167/395 (42%), Gaps = 77/395 (19%)
Query: 96 NAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
N+ + G +L+ G++D AR+ F+++ +D+ WN+M+SGY A N+F M
Sbjct: 145 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMV 204
Query: 151 ----------------------------------------KRDVVSWNTMLSGYAQNGYA 170
D++ N+++ YA+
Sbjct: 205 LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV 264
Query: 171 DAARRIFDRMLEKNEISWNGLLA--AYVQNG----------RIEEACMLFESKANWEVVS 218
+ ARR F + + + +SWN +LA + Q G R+ AC +F + +VV
Sbjct: 265 EVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVV 324
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITGYAQNNYLA------EAQRLFE 271
WNS++ + R +A + M + + EV+ TM++ + LA E +
Sbjct: 325 WNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFII 384
Query: 272 EAPVKDV-FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY-VQTKRMDMAR 329
+ F +++ Y + G + ++R IFD MP+++ VSWN MI+ Y + MD
Sbjct: 385 RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVN 444
Query: 330 --ELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGY 381
+ F M K N ++ +++ + SG I F M + +A ++
Sbjct: 445 LFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLL 504
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+++G ++L FIE + N + + S+L C
Sbjct: 505 SRAGQFNETLE-FIEKMPFEP--NAAVWGSLLGAC 536
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 181/451 (40%), Gaps = 91/451 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN+ ++ + G AL+VF M + +S++ + +S L R++
Sbjct: 176 DVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 235
Query: 116 D-----QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML--SGYAQNG 168
+ DL+ N ++ Y + +S+ AR F M+ + D+VSWN ML +G+ Q G
Sbjct: 236 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYG 295
Query: 169 YADAARRIFDRM----------LEKNEISWNGLLAAYVQNGRIEEACMLFESK--ANWEV 216
AA F RM ++ + WN +++A Q+GR A L +N EV
Sbjct: 296 DGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 355
Query: 217 VS-------------------------------------WNSLMGGFVKQKRLGDAKWIF 239
+ NSL+ + + + ++ IF
Sbjct: 356 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 415
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVD 295
D MP RD VSWN MI+ Y + + +A LF++ + T+T ++S +G ++
Sbjct: 416 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 475
Query: 296 EARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG 349
E F M + + + M+ + + + E E M + N A W +++
Sbjct: 476 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 535
Query: 350 -----------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
YA AR LF+ PQ ++ + Y+ +G ED+ ++ MK
Sbjct: 536 CRIHCNPDLAEYA-------ARYLFELEPQSSG-NYVLMANIYSAAGRWEDAAKIRCLMK 587
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLH 429
G + + P S + L S +G H
Sbjct: 588 ERG--VTKPPGCSWIEVKRKLHSFVVGDTSH 616
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ S+L C L +L LG Q+H QLV G + F+G+ LL +YC+ G VE+A F+++
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+++V SW ++ Y G ++ + LF M G++PD + ACS G +
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
Y G NS ++D+ + GR+D A+ + + F+ D W ++
Sbjct: 133 -VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMV 184
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/714 (35%), Positives = 414/714 (57%), Gaps = 18/714 (2%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
++ ++P + +N ++ Y L AR+VFD +PQ +L SWN ++ Y ++ LS
Sbjct: 28 NIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSE 87
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-----NEISWNGLLAAYV 196
FE +P RD V+WN ++ GY+ +G AA + ++ M++ ++ +L
Sbjct: 88 MERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSS 147
Query: 197 QNGRIEEACMLFES--KANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
NG + + K +E ++ + L+ + K + DAK +F + R+ V +NT
Sbjct: 148 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNT 207
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKN 308
++ G + +A +LF KD +W+AM+ G QNG EA F M + +
Sbjct: 208 LMGGLLACGMIEDALQLFRGME-KDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMD 266
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFD 364
+ +++ ++ R++ + N+ + +I Y + + +A+ +FD
Sbjct: 267 QYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFD 326
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
RM Q + +SW A++ GY Q+G + +++++F++M+R G + +S CAN++SLE
Sbjct: 327 RMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEE 386
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G Q HG+ + G V N+L+ +Y KCG ++++ F E+ +D +SW M++ YA+
Sbjct: 387 GSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQ 446
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
G +A+ LF+ M +G+KPD +T+ G++SACS GLVEKG YF M +YG++P++
Sbjct: 447 FGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNG 506
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY+CM+DL R+GR++EA + MPF PDA W LL ACR G E+ + AAE + E+
Sbjct: 507 HYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 566
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
+P + Y LLS++YA+ G+W V+++R M+++ V+K G SW++ + K+H+FS D
Sbjct: 567 DPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDES 626
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
P D+IYA LEEL K+ +G+ T V HDV E K ML HSE+LA+A+G++ +P
Sbjct: 627 SPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVP 686
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+G PIRV KNLRVC DCHNA KHIS + GR I++RD RFH F G+CSCGD+W
Sbjct: 687 SGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 218/499 (43%), Gaps = 96/499 (19%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A VF+ +P+ + S+N ++ Y +G L + F+++P RD V+WNV+I GY + +
Sbjct: 57 ARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLV 116
Query: 140 SAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----NG 190
AA + M K V+ TML + NG+ ++I ++++ S+ +
Sbjct: 117 GAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 176
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
LL Y + G I +A +F + V +N+LMGG + + DA +F M +D VSW
Sbjct: 177 LLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSW 235
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKD--------------------------------- 277
+ MI G AQN EA F E ++
Sbjct: 236 SAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIR 295
Query: 278 ------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
++ +A++ Y + + A+ +FD M +KN VSW AM+ GY QT R A ++
Sbjct: 296 TNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKI 355
Query: 332 FEAM-----------------TCKNVASW----------------------NTMITGYAQ 352
F M C N++S N+++T Y +
Sbjct: 356 FLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGK 415
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G+I + LF+ M D +SW A+++ YAQ G + ++++LF +M + G + + T V
Sbjct: 416 CGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGV 475
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA----LLVMYCKCGSVEEAYHAFEEI- 467
+S C+ +E G++ ++ E G N ++ ++ + G +EEA +
Sbjct: 476 ISACSRAGLVEKGQRYFELMIN---EYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMP 532
Query: 468 VDKDVISWNTMIAGYARHG 486
D I W T+++ G
Sbjct: 533 FRPDAIGWTTLLSACRNKG 551
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 196/478 (41%), Gaps = 99/478 (20%)
Query: 44 HLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS----------- 92
HL+ R K D D WNV I + +G +A+ +N+M + S
Sbjct: 84 HLSEMERTFEKLP-DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTM 142
Query: 93 ---------VSYNAMISG---------YLLNGQ-----------LDPARQVFDQMPQRDL 123
VS I G YLL G + A++VF + R+
Sbjct: 143 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNT 202
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM--- 180
V +N ++ G + + A LF M K D VSW+ M+ G AQNG A F M
Sbjct: 203 VMYNTLMGGLLACGMIEDALQLFRGMEK-DSVSWSAMIKGLAQNGMEKEAIECFREMKIE 261
Query: 181 -LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
L+ ++ + +L A + +GR AC++ + + ++L+ + K K L
Sbjct: 262 GLKMDQYPFGSVLPACGGLGAINDGRQIHACII-RTNLQDHIYVGSALIDMYCKCKCLHY 320
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQ 290
AK +FDRM ++ VSW M+ GY Q EA ++F D +T +S
Sbjct: 321 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACAN 380
Query: 291 NGKVDE-----ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
++E + I + TVS N+++ Y + +D + LF M ++ SW
Sbjct: 381 ISSLEEGSQFHGKAITAGLIHYITVS-NSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTA 439
Query: 346 MITGYAQSGEITHARNLFDRMPQ----HDCISWAAIIAGYAQSGYSEDSLRLF-IEMKRY 400
M++ YAQ G A LFD+M Q D ++ +I+ +++G E R F + + Y
Sbjct: 440 MVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEY 499
Query: 401 G------------ERLNRS-------------PF-------TSVLSTCANLASLELGK 426
G + +RS PF T++LS C N +LE+GK
Sbjct: 500 GIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGK 557
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 11/216 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+++ + C L + K +HG +++ F+ N ++ Y S A F+ I
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++ SWN ++ Y++ G + FE + D +T ++ S +GLV +
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVK 121
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL---MKNMPFEPDAATWGALLGAC 585
+ +M +D+ M+ L G + + + + + FE LL
Sbjct: 122 AYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL--- 178
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMY-VLLSNLYA 620
+Y K A +V + ++ N MY L+ L A
Sbjct: 179 DMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLA 214
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/659 (37%), Positives = 394/659 (59%), Gaps = 7/659 (1%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N ++S ++RN + AR+LF M V + M+ GYA G + A ++F M K+ I
Sbjct: 54 NYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLI 113
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
SWN +L ++ G + AC +F+ + VVSW +++ G ++ R+ A+ +F MP +D
Sbjct: 114 SWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPTKD 173
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-- 304
+WN+M+ G+ N + +A LFE+ P ++V +WT+++ G NG+ EA ++F M
Sbjct: 174 VTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLA 233
Query: 305 ---PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT--CKNVASWNTMITGYAQSGEITHA 359
+T++ + T + + T C N ++I+ YA I +A
Sbjct: 234 SFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNA 293
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
++F+ + + W A++ GY + D+L++F M R N+S TS L++C L
Sbjct: 294 SSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGL 353
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+++ G+++H K+G E+ FV N+L+VMY KCG + + F + K+V+SWN++I
Sbjct: 354 EAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSII 413
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
G A+HGFG+ AL LF M + PD+IT+ G+LSAC H+G++ KG +F +++G+
Sbjct: 414 VGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGI 473
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
++HY+ MVDLLGR G+L+EA+ L+ MP + + W ALL + + +AE+AA+
Sbjct: 474 EMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAK 533
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ +++P + Y LLSNLYA++G+W +VSK+R KM+D G+ K G SW+ ++ H F
Sbjct: 534 CVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFI 593
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD HP +IY LE L KLK+ G+V K HDV E+KE ML YHSE+LA+ +G
Sbjct: 594 SGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFG 653
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S G I VMKNLR+C DCHNA+K SK+VGR I++RD +RFHHF G+CSCGDYW
Sbjct: 654 LISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 194/409 (47%), Gaps = 48/409 (11%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ H+RNG D A +FN M Y MI GY G+L+ A ++F +MP +DL+
Sbjct: 54 NYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLI 113
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
SWN M+ G ++ L+ A N+F+ M +R+VVSW T+++G + G + A +F M K+
Sbjct: 114 SWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPTKD 173
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
+WN ++ + NGR+E+A LFE N V+SW S++GG R +A +F +M
Sbjct: 174 VTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLA 233
Query: 245 RDEVSWNTMI------------------------TGYAQNNYLA--------------EA 266
+ + +T+ TGY N Y++ A
Sbjct: 234 SFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNA 293
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQT 322
+F + ++V WTA+++GY N + +A +F M N S + +
Sbjct: 294 SSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGL 353
Query: 323 KRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ +D RE+ A+ K ++ N+++ Y + G I +F RM + + +SW +I
Sbjct: 354 EAVDRGREV-HAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSI 412
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
I G AQ G+ +L LF +M R + +LS C + L G+
Sbjct: 413 IVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGR 461
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 175/389 (44%), Gaps = 20/389 (5%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN + ++ G A ++F+ M R+ VS+ +I+G L G+++ A +F MP
Sbjct: 111 DLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMP 170
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+D+ +WN M+ G+ N + A LFE MP R+V+SW +++ G NG + A +F +
Sbjct: 171 TKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHK 230
Query: 180 MLEKNEISWNGLLAAYVQNGRI-------EEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
ML + + + L A I + ++ ++ + SL+ + K +
Sbjct: 231 MLASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLI 290
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF----TWTAMVSGY 288
+A IF+ R+ V W ++TGY N +A ++F+ V + T+ ++
Sbjct: 291 DNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSC 350
Query: 289 VQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
VD R + E + N+++ Y + ++ +F M+ KNV SWN
Sbjct: 351 CGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWN 410
Query: 345 TMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEM-KR 399
++I G AQ G A LF +M + D I+ A +++ SG F K
Sbjct: 411 SIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKN 470
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQL 428
+G + ++S++ LE + L
Sbjct: 471 FGIEMTNEHYSSMVDLLGRYGQLEEAEAL 499
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/688 (40%), Positives = 388/688 (56%), Gaps = 68/688 (9%)
Query: 136 NKSLSAARNLFEMMPKR--DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
++ LS A +LF + + ++ WNT++ ++ ++ +F +ML +GL
Sbjct: 72 SRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLH------SGLYP 125
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
+ ++C +SKA E KQ K P ++
Sbjct: 126 NSHTFPSLFKSCA--KSKATHEA-----------KQLHAHALKLALHLHPHVH----TSL 168
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
I Y+Q L A+ +F+++ ++D ++TA+++GYV G VD+AR +FD +P K+ VSWN
Sbjct: 169 IHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWN 228
Query: 314 AMIAGYVQTKRMDMARELFEAM-----------------TC---------KNVASW---- 343
AMIAGYVQ+ R + A F M C K + SW
Sbjct: 229 AMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDR 288
Query: 344 ---------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
N ++ Y++ GEI AR LFD M D I W +I GY E++L LF
Sbjct: 289 GFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLF 348
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK----VGFEAGCFVGNALLVM 450
M R N F +VL CA+L +L+LGK +H + K G + +++VM
Sbjct: 349 EVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVM 408
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG VE A F + + + SWN MI+G A +G + AL LFE M G +PDDIT
Sbjct: 409 YAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITF 468
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
VG+LSAC+ G VE G YF SMN+DYG+ P +HY CM+DLL R+G+ DEA+ LM NM
Sbjct: 469 VGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNME 528
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
EPD A WG+LL ACR++G+ E E AE +FE+EPEN+G YVLLSN+YA +GRW DV+K
Sbjct: 529 MEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAK 588
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
+R K+ D+G+KKV G + +E+ VH F VGD HP+ + I+ L+E++ L++ GFV
Sbjct: 589 IRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPD 648
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
T VL+D+ EE KE L HSEKLA+A+G++S G IR++KNLRVC +CH+A K ISK
Sbjct: 649 TSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISK 708
Query: 751 IVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I R II RD NRFHHF G CSC D W
Sbjct: 709 IFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 176/370 (47%), Gaps = 39/370 (10%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+ ++I Y G+L AR VFD+ RD VS+ +I+GYV + AR LF+ +P +DV
Sbjct: 165 HTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDV 224
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--KA 212
VSWN M++GY Q+G + A F RM E ++S N V + AC S
Sbjct: 225 VSWNAMIAGYVQSGRFEEALACFTRMQEA-DVSPNQSTMVSVLS-----ACGHLRSLELG 278
Query: 213 NWEVVSW-------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
W + SW N+L+ + K +G A+ +FD M +D + WNTMI GY
Sbjct: 279 KW-IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCH 337
Query: 260 NNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-------N 308
+ EA LFE E + T+ A++ G +D + + + + N
Sbjct: 338 LSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVN 397
Query: 309 TVS-WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
VS W ++I Y + +++A ++F +M +++ASWN MI+G A +G A LF+ M
Sbjct: 398 NVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMI 457
Query: 368 ----QHDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASL 422
Q D I++ +++ Q+G+ E R F M K YG + ++ A
Sbjct: 458 NEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKF 517
Query: 423 ELGKQLHGQL 432
+ K L G +
Sbjct: 518 DEAKVLMGNM 527
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ W I + + GC + A VF SM RS S+NAMISG +NG + A +F++M
Sbjct: 398 NVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMI 457
Query: 120 ----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS-----WNTMLSGYAQNGYA 170
Q D +++ ++S + + F M K +S + M+ A++G
Sbjct: 458 NEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKF 517
Query: 171 DAARRIFDRM-LEKNEISWNGLLAAYVQNGRIE 202
D A+ + M +E + W LL A +G++E
Sbjct: 518 DEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE 550
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 286/839 (34%), Positives = 446/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N I + +NG +SA VF+ + +R SVS+ AM+SG +G + A +F QM
Sbjct: 209 NPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVY 268
Query: 119 PQRDLVS---------------------------------WNVMISGYVRNKSLSAARNL 145
P + S N +++ Y R + A +
Sbjct: 269 PTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQV 328
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M +RD VS+N+++SG +Q GY+D A +F +M L+ + ++ LL+A G +
Sbjct: 329 FNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGAL 388
Query: 202 ----EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ ++ + +++ +L+ +VK + A F + V WN M+ Y
Sbjct: 389 LVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAY 448
Query: 258 AQNNYLAEAQRLFEEAPVK---------------------------------------DV 278
+ L E+ ++F + ++ +V
Sbjct: 449 GLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNV 508
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--- 335
+ + ++ Y + GK+D A IF + EK+ VSW AMIAGY Q ++ A LF+ M
Sbjct: 509 YVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQ 568
Query: 336 --------------TCKNVASWN----------------------TMITGYAQSGEITHA 359
C + + N +++ YA+ G++ A
Sbjct: 569 GIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDA 628
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
FD++ D ISW ++I+G+AQSG+ E++L LF +M + G+ +N F +S AN+
Sbjct: 629 YFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANV 688
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++LGKQ+H ++K G ++ V N L+ +Y KCG++++A F E+ +K+ ISWN M+
Sbjct: 689 ANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAML 748
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
GY++HG G AL LFE MK +G+ P+ +T VG+LSACSH GLV++G +YF SM +G+
Sbjct: 749 TGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGL 808
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P +HY C+VDLLGR+G L A+ ++ MP +PDA LL AC ++ ++ E AA
Sbjct: 809 VPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAAS 868
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP+++ YVLLSN+YA +G+WG + R M+DRGVKK G SW+EV N VH F
Sbjct: 869 HLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFF 928
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD HP D+IY YL +L ++G++ T +L+D +K HSEKLA+A+G
Sbjct: 929 AGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFG 988
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+ + PI V KNLRVC DCHN IK++SKI R+I++RD+ RFHHF GG CSC DYW
Sbjct: 989 LLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 160/639 (25%), Positives = 264/639 (41%), Gaps = 161/639 (25%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV------- 154
Y+ G LD A VFD+MP R L WN ++ +V K LF M + V
Sbjct: 113 YIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTY 172
Query: 155 ---------------------------------VSWNTMLSGYAQNGYADAARRIFDRML 181
N ++ Y +NG+ ++A+++FD +
Sbjct: 173 AGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ 232
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLF---------------------ESKANWEVVSWN 220
+++ +SW +L+ Q+G EEA +LF +K + V
Sbjct: 233 KRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG-E 291
Query: 221 SLMGGFVKQ----------------KRLGD---AKWIFDRMPVRDEVSWNTMITGYAQNN 261
L G +KQ RLG+ A+ +F+ M RDEVS+N++I+G +Q
Sbjct: 292 QLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQG 351
Query: 262 YLAEAQRLFEEAPV---------------------------------------KDVFTWT 282
Y +A LF++ + D+
Sbjct: 352 YSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEG 411
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------- 335
A++ YV+ + A F + +N V WN M+ Y ++ + ++F M
Sbjct: 412 ALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471
Query: 336 ----------TCK----------------------NVASWNTMITGYAQSGEITHARNLF 363
TC NV + +I YA+ G++ HA +F
Sbjct: 472 NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIF 531
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
R+ + D +SW A+IAGYAQ ++L LF EM+ G + F S +S CA + +L
Sbjct: 532 RRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALN 591
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G+Q+H Q G+ VGNAL+ +Y +CG V +AY AF++I KD ISWN++I+G+A
Sbjct: 592 QGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFA 651
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+ G ++AL LF M G + + T G + + K + ++M G +
Sbjct: 652 QSGHCEEALSLFSQMSKAGQEINSFTF-GPAVSAAANVANVKLGKQIHAMIIKTGHDSET 710
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ ++ L + G +D+A+ MP E + +W A+L
Sbjct: 711 EVSNVLITLYAKCGNIDDAERQFFEMP-EKNEISWNAML 748
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 213/478 (44%), Gaps = 34/478 (7%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
+VV ++ Y G D A +FD M + WN +L +V LF
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKW-IFDRMPVRDEVS--------WNTMITGYAQNNYL 263
+V G ++ GD + +++ R N +I Y +N +L
Sbjct: 162 QEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFL 221
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGY 319
A+++F+ +D +W AM+SG Q+G +EA ++F M ++++++
Sbjct: 222 NSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSAC 281
Query: 320 VQTKRMDMAREL----------FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
+ + + +L E C N ++T Y++ G A +F+ M Q
Sbjct: 282 TKVEFYKVGEQLHGLVLKQGFSLETYVC------NALVTLYSRLGNFIPAEQVFNAMLQR 335
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D +S+ ++I+G +Q GYS+ +L LF +M + + S+LS C+++ +L +GKQ H
Sbjct: 336 DEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFH 395
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
+K G + + ALL +Y KC ++ A+ F ++V+ WN M+ Y
Sbjct: 396 SYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLN 455
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
++ +F M+ GI+P+ T IL CS V+ G E ++ G N + +
Sbjct: 456 ESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG-EQIHTQVLKTGFQFNVYVSSVL 514
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+D+ + G+LD A + + + E D +W A++ Y + E +A + EM+ +
Sbjct: 515 IDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAG---YAQHEKFAEALNLFKEMQDQ 568
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 150/399 (37%), Gaps = 68/399 (17%)
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
C V ++ Y G++ A +FD MP W ++ + + L LF
Sbjct: 100 CAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRR 159
Query: 397 MKRYGERLNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M + + + + VL C +++H + + G+E FV N L+ +Y K G
Sbjct: 160 MLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNG 219
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ A F+ + +D +SW M++G ++ G ++A++LF M T G+ P +LS
Sbjct: 220 FLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLS 279
Query: 516 ACSHTGLVEKGTEYF-------YSM------------NRDYGVIPNSK-----------H 545
AC+ + G + +S+ +R IP +
Sbjct: 280 ACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVS 339
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFE---PDAATWGALLGACR---------------- 586
Y ++ L + G D+A L K M + PD T +LL AC
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399
Query: 587 ----------------LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
LY K + A E E EN ++ ++ Y + K
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFK 459
Query: 631 VRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPE 667
+ +M+ G++ + T S L + + +G+ +H +
Sbjct: 460 IFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQ 498
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 14/253 (5%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
F + +H+ A+ Y+ + + M+ G R N + +L C +
Sbjct: 28 FFQKFLEHN----TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGW 83
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
G +LHG+++K+GF A + L+ +Y G ++ A F+E+ + + WN ++
Sbjct: 84 FSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHR 143
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
+ L LF M +KPD+ T G+L C + E ++ +G
Sbjct: 144 FVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGY-- 201
Query: 542 NSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ + C ++DL + G L+ A+ + + + D+ +W A+L G E A
Sbjct: 202 ENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ-KRDSVSWVAMLSGLSQSGCEEEA----- 255
Query: 600 VIFEMEPENAGMY 612
V+ + +G+Y
Sbjct: 256 VLLFCQMHTSGVY 268
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D + NV IT + + G D A F MP ++ +S+NAM++GY +G A
Sbjct: 703 KTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALS 762
Query: 114 VFDQMPQRDLVSWNVMISGYVRN-----------KSLSAARNLFEMMPKRDVVSWNTMLS 162
+F+ M Q ++ +V G + K + R + ++PK + + ++
Sbjct: 763 LFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPE--HYACVVD 820
Query: 163 GYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIE 202
++G ARR + M ++ + + LL+A + + I+
Sbjct: 821 LLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNID 861
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/773 (35%), Positives = 423/773 (54%), Gaps = 92/773 (11%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+N MI GQL ARQ+ DQMP R+ S +++ISGYV++ +L+ AR +F+ +R V
Sbjct: 46 FNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTV 105
Query: 155 VSWNTMLSGYAQ-NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
V+W TM+ Y++ N + DA + + ++ + + +E A L+++ A
Sbjct: 106 VAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHA- 164
Query: 214 WEVVSW---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
++V N+L+ + K L A+ +F M D VS+N MITGYA N
Sbjct: 165 -QIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNE 223
Query: 265 EAQRLFEE---------------------------------------APVKDVFTWTAMV 285
EA LF E + +++VF A +
Sbjct: 224 EAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFL 283
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------- 335
Y ++ V+E R +F+ MPE + VS+N +I Y ++ + +LF+ +
Sbjct: 284 DFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNF 343
Query: 336 ---TCKNVASW--------------------------NTMITGYAQSGEITHARNLFDRM 366
T ++A+ N+++ YA+ G+ A +F R+
Sbjct: 344 PFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRL 403
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ W A+I+ Q G E+ L+LF EM+R +++ F VL ANLAS+ LGK
Sbjct: 404 SSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGK 463
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
QLH +++ GF + G ALL MY C S+++A FEE+ +++V++WN +++ YA++G
Sbjct: 464 QLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNG 522
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
GK L FE M G +PD ++ + IL+ACSH LVE+G +YF M+ Y + P +HY
Sbjct: 523 DGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHY 582
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
T MVD L R+GR DEA+ LM MPFEPD W ++L +CR++ LA KAA +F M+
Sbjct: 583 TAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKV 642
Query: 607 -ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
+A YV +SN++A +G+W V KV+ MRDRGV+K+ YSW+E+++KVH FS D H
Sbjct: 643 LRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKH 702
Query: 666 PEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
P++ I +E L +++++G+ +V +E K L+YHSE+LA+A+ +++ P
Sbjct: 703 PQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPE 762
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PI VMKNLR C DCH AIK ISKIVGR I +RD+NRFHHF GSCSCGDYW
Sbjct: 763 GSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 179/401 (44%), Gaps = 47/401 (11%)
Query: 296 EARMI---FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+AR++ FD + T +N MI + ++ AR+L + M +N S + +I+GY +
Sbjct: 31 DARIVKTGFDPI----TSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVK 86
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG +T AR +FD + ++W +I Y++S D+ +LF EM R G + + + ++
Sbjct: 87 SGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITL 146
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L+ C +L + Q H Q+VK+G V N LL Y K G ++ A F E+ D
Sbjct: 147 LTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDS 206
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG-TEYFY 531
+S+N MI GYA +G ++A+ LF M+ +G KP D T ++SA GL + + +
Sbjct: 207 VSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA--SVGLDDTAFGQQIH 264
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK- 590
I N +D + ++E + L MP E D ++ ++ A GK
Sbjct: 265 GFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMP-ELDGVSYNVIITAYAWVGKV 323
Query: 591 -----------------------TELAEKA------------AEVIFEMEPENAGMYVLL 615
T L+ A A+V+ M + + L
Sbjct: 324 KESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSL 383
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
++YA G++ + ++ L++ R T VQ +H
Sbjct: 384 VDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH 424
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 226/535 (42%), Gaps = 65/535 (12%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR 121
R N + ++ + G DSA +F M SVS+N MI+GY NG + A ++F +M
Sbjct: 176 RVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNL 235
Query: 122 DL----VSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAA 173
++ +IS V + + + + K R+V N L Y+++ +
Sbjct: 236 GFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEV 295
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-------SKANWEVVSWNSLMGGF 226
R++F+ M E + +S+N ++ AY G+++E+ LF+ + N+ + S+
Sbjct: 296 RKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASS 355
Query: 227 --VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
++ R A+ + VS N+++ YA+ EA R+F + WTAM
Sbjct: 356 LDLQMGRQLHAQVVVSMADPDFRVS-NSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAM 414
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK----RMDMARELFEAMT---C 337
+S VQ G + +F M N + A A ++ + + ++L +
Sbjct: 415 ISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF 474
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
NV S ++ YA I A F+ M + + ++W A+++ YAQ+G + +L+ F EM
Sbjct: 475 MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEM 534
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
G + + F +L+ C+ H +LV+ G + N + +Y
Sbjct: 535 IMSGYQPDSVSFLCILTACS-----------HCRLVEEGLK----YFNDMSGVY-NLAPK 578
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E Y A M+ R G +A L M + +PD+I +L++C
Sbjct: 579 REHYTA--------------MVDALCRSGRFDEAEKL---MGQMPFEPDEIVWTSVLNSC 621
Query: 518 ---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ L K ++M V+ ++ Y M ++ AG+ D + K M
Sbjct: 622 RIHKNYALARKAAGQLFNMK----VLRDAAPYVTMSNIFAEAGQWDSVVKVKKAM 672
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 48/318 (15%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D D R N + + + G + A +F + RS+V + AMIS + G + ++F
Sbjct: 373 ADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFY 432
Query: 117 QMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKR---DVVSWNTMLSGYAQNGY 169
+M + D ++ ++ S+ + L + + +V S +L YA
Sbjct: 433 EMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSGCALLDMYANCAS 492
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
A + F+ M E+N ++WN LL+AY QNG + FE +M G+
Sbjct: 493 IKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEM----------IMSGY--- 539
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-------APVKDVFTWT 282
P D VS+ ++T + + E + F + AP ++ +T
Sbjct: 540 ------------QP--DSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKRE--HYT 583
Query: 283 AMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAR----ELFEAMTC 337
AMV ++G+ DEA + MP E + + W +++ K +AR +LF
Sbjct: 584 AMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVL 643
Query: 338 KNVASWNTMITGYAQSGE 355
++ A + TM +A++G+
Sbjct: 644 RDAAPYVTMSNIFAEAGQ 661
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/606 (41%), Positives = 381/606 (62%), Gaps = 21/606 (3%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I+ +R+G A +F+SM R +V++N+MI+GY+ ++ ARQ+FD+MP+RD+V
Sbjct: 43 NKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVV 102
Query: 125 SWNVMISGYVR---NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
SWN+++SGY ++ + R LFE+MP+RD VSWNT++SGYA+NG D A ++F+ M
Sbjct: 103 SWNLIVSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMP 162
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
E+N +S N L+ ++ NG ++ A F + S ++L+ G V+ L A I
Sbjct: 163 ERNAVSSNALITGFLLNGDVDSAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGILCE 222
Query: 242 MPVRDEV---SWNTMITGYAQNNYLAEAQRLFEEAP-------------VKDVFTWTAMV 285
D+ ++NT+I GY Q ++ EA+RLF+ P ++V +W +M+
Sbjct: 223 CGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMM 282
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
YV+ G + AR +FD M E++T SWN MI+GYVQ M+ A +LF M +V SWN
Sbjct: 283 MCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPDVLSWNL 342
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+++G+AQ G++ A++ F+RMP + ISW +IIAGY ++ + +++LF M+ GER +
Sbjct: 343 IVSGFAQKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPD 402
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
R +SV+S C L +L LGKQ+H QLV + N+L+ MY +CG++ +A F
Sbjct: 403 RHTLSSVMSVCTGLVNLYLGKQIH-QLVTKIVIPDSPINNSLITMYSRCGAIVDACTVFN 461
Query: 466 EI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
EI + KDVI+WN MI GYA HG +AL LF+ MK + I P IT + +++AC+H GLVE
Sbjct: 462 EIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVE 521
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G F SM DYG+ +H+ +VD+LGR G+L EA +L+ MPF+PD A WGALL A
Sbjct: 522 EGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLSA 581
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CR++ ELA AA+ + +EPE++ YVLL N+YA G+W D VR+ M ++ VKK
Sbjct: 582 CRVHNNVELALVAADALIRLEPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNVKKQA 641
Query: 645 GYSWLE 650
GYSW++
Sbjct: 642 GYSWVD 647
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 237/469 (50%), Gaps = 32/469 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN I+ + +NG D AL +FN+MP R++VS NA+I+G+LLNG +D A F MP
Sbjct: 134 DCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVDFFRTMP 193
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD---VVSWNTMLSGYAQNGYADAARRI 176
+ S + +ISG VRN L A + D V ++NT+++GY Q G+ + ARR+
Sbjct: 194 EHYSTSLSALISGLVRNGELDMAAGILCECGNGDDDLVHAYNTLIAGYGQRGHVEEARRL 253
Query: 177 FD-------------RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
FD R +N +SWN ++ YV+ G I A LF+ + SWN+++
Sbjct: 254 FDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQDTCSWNTMI 313
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
G+V+ + +A +F MP+ D +SWN +++G+AQ L A+ FE P+K++ +W +
Sbjct: 314 SGYVQISNMEEASKLFREMPIPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLKNLISWNS 373
Query: 284 MVSGYVQNGKVDEARMIFDAM------PEKNTV-SWNAMIAGYVQTKRMDMARELFEAMT 336
+++GY +N A +F M P+++T+ S ++ G V +L +
Sbjct: 374 IIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIV 433
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFI 395
+ N++IT Y++ G I A +F+ + + D I+W A+I GYA G + ++L LF
Sbjct: 434 IPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGLAAEALELFK 493
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
MKR F SV++ CA+ +E G +Q + G E +L+ + +
Sbjct: 494 LMKRLKIHPTYITFISVMNACAHAGLVEEGRRQFKSMINDYGIERRVEHFASLVDILGRQ 553
Query: 455 GSVEEAYHAFEEIVDK-DVISWNTMIAGYARHG------FGKDALMLFE 496
G ++EA + K D W +++ H DAL+ E
Sbjct: 554 GQLQEAMDLINTMPFKPDKAVWGALLSACRVHNNVELALVAADALIRLE 602
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 168/356 (47%), Gaps = 60/356 (16%)
Query: 53 PKPAGDWD---------IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL 103
P GD D + WN + +++ G SA +F+ M + + S+N MISGY+
Sbjct: 258 PDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYV 317
Query: 104 LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
++ A ++F +MP D++SWN+++SG+ + L+ A++ FE MP ++++SWN++++G
Sbjct: 318 QISNMEEASKLFREMPIPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLKNLISWNSIIAG 377
Query: 164 YAQNGYADAARRIFDRMLEKNEIS-----------WNGLLAAYV--QNGRIEEACMLFES 210
Y +N A ++F RM + E GL+ Y+ Q ++ ++ +S
Sbjct: 378 YEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVIPDS 437
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRL 269
N +++ S G V DA +F+ + + +D ++WN MI GYA + AEA L
Sbjct: 438 PINNSLITMYSRCGAIV------DACTVFNEIKLYKDVITWNAMIGGYASHGLAAEALEL 491
Query: 270 FEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
F+ + T+ ++++ G V+E R F +MI Y +R
Sbjct: 492 FKLMKRLKIHPTYITFISVMNACAHAGLVEEGRRQF-----------KSMINDYGIERR- 539
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
V + +++ + G++ A +L + MP + D W A+++
Sbjct: 540 --------------VEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLSA 581
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/564 (42%), Positives = 363/564 (64%), Gaps = 4/564 (0%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNE 185
N+ IS R + AR +FE MP+RD+ W TM++GY + G AR++FDR +KN
Sbjct: 5 NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNV 64
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++W ++ Y++ +++EA LF VVSWN+++ G+ + A +F RMP R
Sbjct: 65 VTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPER 124
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ VSWNT+IT Q + +AQRLF++ +DV +WT MV+G +NG+V++AR +FD MP
Sbjct: 125 NVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMP 184
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+N VSWNAMI GY Q +R+D A +LF+ M +++ SWNTMITG+ Q+GE+ A LF
Sbjct: 185 VRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGE 244
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLEL 424
M + + I+W A++ GY Q G SE++LR+FI+M E + N F +VL C++LA L
Sbjct: 245 MQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTE 304
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGY 482
G+Q+H + K F+ V +AL+ MY KCG + A F++ + +D+ISWN MIA Y
Sbjct: 305 GQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAY 364
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A HG+GK+A+ LF M+ +G+ +D+T VG+L+ACSHTGLVE+G +YF + ++ +
Sbjct: 365 AHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLR 424
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
HY C+VDL GRAGRL EA N+++ + E WGALL C ++G ++ + AE I
Sbjct: 425 EDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKIL 484
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
++EP+NAG Y LLSN+YA+ G+W + + VR++M+D G+KK G SW+EV N V F VGD
Sbjct: 485 KIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVGD 544
Query: 663 TLHPEKDRIYAYLEELEFKLKQDG 686
H + + + L +L K+K+ G
Sbjct: 545 KPHSQYEPLGHLLHDLHTKMKKAG 568
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 172/503 (34%), Positives = 271/503 (53%), Gaps = 53/503 (10%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-P 119
+++ N+ I+ R G D A VF MP R + MI+GYL G + AR++FD+
Sbjct: 1 MKRCNLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDA 60
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
++++V+W M++GY++ + A LF MP R+VVSWNTM+ GYA+NG A +F R
Sbjct: 61 KKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRR 120
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M E+N +SWN ++ A VQ GRIE+A LF+ + +VVSW +++ G K R+ DA+ +F
Sbjct: 121 MPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALF 180
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
D+MPVR+ VSWN MITGYAQN L EA +LF+ P +D+ +W M++G++QNG+++ A
Sbjct: 181 DQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEK 240
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT-------------- 345
+F M EKN ++W AM+ GYVQ + A +F M N NT
Sbjct: 241 LFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLA 300
Query: 346 --------------------------MITGYAQSGEITHARNLFDR--MPQHDCISWAAI 377
+I Y++ GE+ AR +FD + Q D ISW +
Sbjct: 301 GLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGM 360
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--- 434
IA YA GY ++++ LF EM+ G N F +L+ C++ +E G + +++K
Sbjct: 361 IAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRS 420
Query: 435 VGFEAGCFVGNALLVMYC-KCGSVEEAYHAFEEIVDKDVIS-WNTMIAGYARHGFGKDAL 492
+ + A LV C + G ++EA + E + ++ ++ W ++AG HG
Sbjct: 421 IQLREDHY---ACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGK 477
Query: 493 MLFESMKTVGIKPDDITMVGILS 515
++ E K + I+P + +LS
Sbjct: 478 LVAE--KILKIEPQNAGTYSLLS 498
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 250/492 (50%), Gaps = 44/492 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN + + RNG AL +F MP R+ VS+N +I+ + G+++ A+++FDQM
Sbjct: 94 NVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMK 153
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
RD+VSW M++G +N + AR LF+ MP R+VVSWN M++GYAQN D A ++F R
Sbjct: 154 DRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQR 213
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M E++ SWN ++ ++QNG + A LF V++W ++M G+V+ +A +F
Sbjct: 214 MPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVF 273
Query: 240 DRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVF-----TWTAMVSGYV 289
+M +E+ N T++ + L E Q++ + K VF +A+++ Y
Sbjct: 274 IKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMIS-KTVFQDSTCVVSALINMYS 332
Query: 290 QNGKVDEARMIFD--AMPEKNTVSWNAMIAGYVQ----TKRMDMARELFEAMTCKNVASW 343
+ G++ AR +FD + +++ +SWN MIA Y + +++ E+ E C N ++
Sbjct: 333 KCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTF 392
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMK 398
++T + +G + FD + ++ I +A ++ ++G +++ + ++
Sbjct: 393 VGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNI---IE 449
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE-AGCFVGNALLVMYCKCGSV 457
GE + + + ++L+ C + ++GK + +++K+ + AG + + L MY G
Sbjct: 450 GLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTY--SLLSNMYASVGKW 507
Query: 458 EEAYHAFEEIVDKDV-----ISW----NTM---IAGYARHG----FGKDALMLFESMKTV 501
+EA + + D + SW NT+ + G H G L MK
Sbjct: 508 KEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHLLHDLHTKMKKA 567
Query: 502 GIKPDDITMVGI 513
G PDD +V +
Sbjct: 568 GDMPDDDLLVSV 579
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 196/406 (48%), Gaps = 32/406 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ W + +NG + A +F+ MP R+ VS+NAMI+GY N +LD A Q+F +
Sbjct: 154 DRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQR 213
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+RD+ SWN MI+G+++N L+ A LF M +++V++W M++GY Q+G ++ A R+F
Sbjct: 214 MPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVF 273
Query: 178 DRMLEKNEISWN-----------GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
+ML NE+ N LA + +I + M+ ++ ++L+ +
Sbjct: 274 IKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQ--MISKTVFQDSTCVVSALINMY 331
Query: 227 VKQKRLGDAKWIFDR--MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FT 280
K L A+ +FD + RD +SWN MI YA + Y EA LF E V T
Sbjct: 332 SKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVT 391
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM 335
+ +++ G V+E FD + + ++ + ++ + R+ A + E +
Sbjct: 392 FVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGL 451
Query: 336 TCK-NVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDS 390
+ + W ++ G G + + +++ PQ + +++ + YA G +++
Sbjct: 452 GEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQ-NAGTYSLLSNMYASVGKWKEA 510
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+ + MK G L + P S + + +G + H Q +G
Sbjct: 511 ANVRMRMKDMG--LKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLG 554
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/736 (36%), Positives = 427/736 (58%), Gaps = 53/736 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
A++ Y+ G ++ R VF+ MP+R++V+W +++GYV+ ++ S LF M V
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW 198
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML 207
++ ++LS A G D RR+ + ++ N L+ Y + G +EEA +
Sbjct: 199 PNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAV 258
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD----RMPVRDEVSWNTMITGYAQNNYL 263
F ++VSWN+LM G + + +A +F M + +++T+I A L
Sbjct: 259 FRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQL 318
Query: 264 AEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG 318
A A++L + D TA++ Y + G++D+A IF MP +N VSW AMI G
Sbjct: 319 ALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGG 378
Query: 319 YVQTKRMDMARELFEAMTCKNVA----SWNTMITG------------------------- 349
+Q + +A LF M NV +++T++T
Sbjct: 379 CIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSVG 438
Query: 350 ------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
Y++ G A ++F + D ++W+A+++ Y+Q+G + + +FI+M G +
Sbjct: 439 TALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMK 498
Query: 404 LNRSPFTSVLSTCAN-LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
N +S + CA+ A ++ G+Q H +K ++ VG+AL+ MY + GS++ A
Sbjct: 499 PNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARI 558
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
FE D+D++SWN+MI+GYA+HG+ K+AL F M+TVGI+ D T + ++ C+H GL
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGL 618
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V++G +YF SM D+ + P +HY+CMVDL RAG+LDE NL++ MPF A W LL
Sbjct: 619 VKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLL 678
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
GACR++ EL + AA+ + +EP+++ YVLLSN+YAA+GRW + +VR M + VKK
Sbjct: 679 GACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKK 738
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G SW++++NKVH+F D HP ++IYA L+ + +LKQ+G+ +T +VLHD+ EE+
Sbjct: 739 EAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQ 798
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE ML HSE+LA+A+G+++ P P++++KNLRVC DCH +K +S I R II+RD +
Sbjct: 799 KETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCS 858
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF+ G+CSCGD+W
Sbjct: 859 RFHHFNAGACSCGDFW 874
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 187/395 (47%), Gaps = 41/395 (10%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
EV +L+ ++K + D + +F+ MP R+ V+W +++TGY Q ++ LF
Sbjct: 134 EVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMR 193
Query: 275 VKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ V FT+T+++S G VD R + + Q+ +
Sbjct: 194 AEGVWPNPFTFTSVLSAVASQGAVDLGRRV------------------HAQSVKFGCRST 235
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
+F C N++I Y++ G + A+ +F +M D +SW ++AG + + ++
Sbjct: 236 VF---VC------NSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEA 286
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L+LF + + +L++S +++V+ CANL L L +QLH ++K GF + V A++
Sbjct: 287 LQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDA 346
Query: 451 YCKCGSVEEAYHAFEEIV-DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
Y KCG +++A++ F + ++V+SW MI G ++ A LF M+ +KP++ T
Sbjct: 347 YSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFT 406
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+L+A L + + + +Y P+ T ++ + G +EA ++ K M
Sbjct: 407 YSTVLTASIPILLPQIHAQI---IKTNYQHAPSVG--TALLASYSKLGNTEEALSIFK-M 460
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
D W A+L Y + + A V +M
Sbjct: 461 IDHKDVVAWSAMLSC---YSQAGDCDGATNVFIKM 492
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 176/423 (41%), Gaps = 93/423 (21%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN------------------- 105
N I + + G + A VF M R VS+N +++G LLN
Sbjct: 240 NSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAK 299
Query: 106 ----------------GQLDPARQVFDQMPQRDLVS-WNVM---ISGYVRNKSLSAARNL 145
QL ARQ+ + + S NVM + Y + L A N+
Sbjct: 300 LSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNI 359
Query: 146 FEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWN----------- 189
F +MP ++VVSW M+ G QN A +F RM E NE +++
Sbjct: 360 FLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL 419
Query: 190 --------------------GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
LLA+Y + G EEA +F+ + +VV+W++++ + +
Sbjct: 420 PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQA 479
Query: 230 KRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFT 280
A +F +M ++ +E + ++ I A + R F +K +
Sbjct: 480 GDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICV 539
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+A+V+ Y + G +D AR++F+ +++ VSWN+MI+GY Q A + F M +
Sbjct: 540 GSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGI 599
Query: 341 ----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSL 391
A++ +I G +G + + FD M IS ++ ++ Y+++G ++++
Sbjct: 600 EMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETM 659
Query: 392 RLF 394
L
Sbjct: 660 NLI 662
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 13/237 (5%)
Query: 359 ARNLFDRMPQHDCISWAA----IIAGYAQSGYSE-DSLRLFIEMKRYGERLNRSPFTSVL 413
AR D MP D + ++ I Y + G ++L F+++ R G R+ + + VL
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCG-RVQGAAVSRVL 106
Query: 414 STCANLASLELGKQLHGQLVKVGFE-AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C + G+QLH VK GF+ A VG AL+ MY KCG VE+ FE + ++V
Sbjct: 107 KVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNV 166
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
++W +++ GY + D + LF M+ G+ P+ T +LSA + G V+ G ++
Sbjct: 167 VTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRR-VHA 225
Query: 533 MNRDYGVIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+ +G S + C ++++ + G ++EA+ + + M D +W L+ L
Sbjct: 226 QSVKFGC--RSTVFVCNSLINMYSKCGLVEEAKAVFRQMETR-DMVSWNTLMAGLLL 279
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 50/216 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRS---------------------------- 91
D+ W+ ++ + + G CD A +VF M +
Sbjct: 465 DVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQF 524
Query: 92 ---SVSY---------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
S+ Y +A+++ Y G +D AR VF++ RDLVSWN MISGY ++
Sbjct: 525 HAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYS 584
Query: 140 SAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNG 190
A + F M + D ++ ++ G G ++ FD M+ + IS ++
Sbjct: 585 KEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSC 644
Query: 191 LLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGG 225
++ Y + G+++E L E + W +L+G
Sbjct: 645 MVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGA 680
>gi|224103137|ref|XP_002312939.1| predicted protein [Populus trichocarpa]
gi|222849347|gb|EEE86894.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/609 (40%), Positives = 383/609 (62%), Gaps = 24/609 (3%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I+ +NG D A +F+ M ++VS+NA+I Y+ ++ AR++FD+MPQRD+V
Sbjct: 1 NKKISNLAKNGRIDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIV 60
Query: 125 SWNVMISGYVR---NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
SWN+MISGYV + L RNLF+ MP+RD+VSWNTM+SGYA+NG D A R+F M
Sbjct: 61 SWNLMISGYVSCHGIRFLKEGRNLFDRMPERDIVSWNTMISGYAKNGRMDEALRMFKLMP 120
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI--- 238
E + +SWN ++ ++QNG + A FE + S ++L+ G ++ L +A +
Sbjct: 121 EGDVVSWNAIVTGFLQNGDVARAIEYFERMPERDAASLSALVSGLIRNGELDEAARVVVR 180
Query: 239 FDRMPVRDE---VSWNTMITGYAQNNYLAEAQRLFEEAPV-------------KDVFTWT 282
F+R R E ++NT+I GY + + + EA++LF++ P ++V +W
Sbjct: 181 FERDGGRKENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGKGKGGDGRFGRNVVSWN 240
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
M+ YV+ G + AR +FD M E++T+SWN MI+GYV MD A LF M ++ S
Sbjct: 241 TMIMCYVKAGNIVFARELFDQMMERDTISWNTMISGYVNMLDMDEASRLFCEMPNPDIFS 300
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN MI G+AQ G++ +LF RMPQ + +SW ++I GY ++ ++++FI+M+ GE
Sbjct: 301 WNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQMQVEGE 360
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ +R +SVLS A + L+LG Q+H QLV + NAL+ MY +CG++ EA
Sbjct: 361 KPDRHTLSSVLSVSAGIVDLQLGMQIH-QLVTKTVIPDVPINNALITMYSRCGAIIEAGT 419
Query: 463 AFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+E+ + K+VISWN MI GYA HG+ +AL +F+ MK+ ++P IT + +L AC+H G
Sbjct: 420 IFDEVKLQKEVISWNAMIGGYASHGYAVEALEVFKLMKSFDVRPTHITFISVLHACAHAG 479
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE+G E F SM ++G+ P+ +HY +VD++ R G+L++A +L+ +MPFEPD A WGAL
Sbjct: 480 LVEEGREIFESMADEFGIEPSVEHYASLVDIMSRHGQLEQALDLINSMPFEPDKAVWGAL 539
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
L A +++ K E+A AAE + +EP+++ YVLL N+YA G+W ++VR+ M +K
Sbjct: 540 LSAAKVHNKIEVARVAAEALIRLEPDSSAPYVLLYNMYADVGQWDSAAEVRIMMERSNIK 599
Query: 642 KVTGYSWLE 650
K YSW++
Sbjct: 600 KQAAYSWVD 608
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 241/476 (50%), Gaps = 31/476 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI WN I+ + +NG D AL +F MP VS+NA+++G+L NG + A + F++MP
Sbjct: 92 DIVSWNTMISGYAKNGRMDEALRMFKLMPEGDVVSWNAIVTGFLQNGDVARAIEYFERMP 151
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNL---FEMMPKRD---VVSWNTMLSGYAQNGYADAA 173
+RD S + ++SG +RN L A + FE R + ++NT+++GY + D A
Sbjct: 152 ERDAASLSALVSGLIRNGELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEA 211
Query: 174 RRIFDRM-------------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
R++FD++ +N +SWN ++ YV+ G I A LF+ + +SWN
Sbjct: 212 RKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERDTISWN 271
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+++ G+V + +A +F MP D SWN MI G+AQ L LF P K++ +
Sbjct: 272 TMISGYVNMLDMDEASRLFCEMPNPDIFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVS 331
Query: 281 WTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMI-AGYVQTKRMDMARELFE 333
W ++++GY +N A IF M P+++T+S + AG V + +L
Sbjct: 332 WNSVITGYEKNDDYIGAIKIFIQMQVEGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVT 391
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLR 392
+V N +IT Y++ G I A +FD + Q + ISW A+I GYA GY+ ++L
Sbjct: 392 KTVIPDVPINNALITMYSRCGAIIEAGTIFDEVKLQKEVISWNAMIGGYASHGYAVEALE 451
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMY 451
+F MK + R F SVL CA+ +E G+++ + + G E +L+ +
Sbjct: 452 VFKLMKSFDVRPTHITFISVLHACAHAGLVEEGREIFESMADEFGIEPSVEHYASLVDIM 511
Query: 452 CKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+ G +E+A + + D W +++ H + A + E++ + ++PD
Sbjct: 512 SRHGQLEQALDLINSMPFEPDKAVWGALLSAAKVHNKIEVARVAAEAL--IRLEPD 565
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 176/361 (48%), Gaps = 21/361 (5%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN I +++ G A +F+ M R ++S+N MISGY+ +D A ++F +MP
Sbjct: 235 NVVSWNTMIMCYVKAGNIVFARELFDQMMERDTISWNTMISGYVNMLDMDEASRLFCEMP 294
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
D+ SWN MI+G+ + L +LF MP++++VSWN++++GY +N A +IF +
Sbjct: 295 NPDIFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQ 354
Query: 180 MLEKNEISWNGLLAAY--VQNGRIE-----EACMLFESKANWEVVSWNSLMGGFVKQKRL 232
M + E L++ V G ++ + L +V N+L+ + + +
Sbjct: 355 MQVEGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVIPDVPINNALITMYSRCGAI 414
Query: 233 GDAKWIFDRMPVRDEV-SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSG 287
+A IFD + ++ EV SWN MI GYA + Y EA +F+ DV T+ +++
Sbjct: 415 IEAGTIFDEVKLQKEVISWNAMIGGYASHGYAVEALEVFKLMKSFDVRPTHITFISVLHA 474
Query: 288 YVQNGKVDEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVA 341
G V+E R IF++M E + + +++ + +++ A +L +M + + A
Sbjct: 475 CAHAGLVEEGREIFESMADEFGIEPSVEHYASLVDIMSRHGQLEQALDLINSMPFEPDKA 534
Query: 342 SWNTMITGYAQSGEITHAR---NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
W +++ +I AR R+ + + YA G + + + I M+
Sbjct: 535 VWGALLSAAKVHNKIEVARVAAEALIRLEPDSSAPYVLLYNMYADVGQWDSAAEVRIMME 594
Query: 399 R 399
R
Sbjct: 595 R 595
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 299/852 (35%), Positives = 446/852 (52%), Gaps = 124/852 (14%)
Query: 26 LQSPANTNPYPSKKTLKRHLNSKSRNKP--------KPAGDWDIRQWNVAITTHMRNGCC 77
LQ P TNP P L + +N+ +K D++ +++ + +R
Sbjct: 23 LQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSF 82
Query: 78 DSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISG 132
D V + + SV+ N++IS Y GQ + A +F M RDL+SW+ M+S
Sbjct: 83 DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSC 142
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTML-SGYAQNGYADAARRIFDRMLEKNEISWNG- 190
+ N M R ++++ M+ +GY N Y AA R E G
Sbjct: 143 FANNN-----------MGFRALLTFVDMIENGYYPNEYCFAAAT---RACSTAEFVSVGD 188
Query: 191 -LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK-RLGDAKWIFDRMPVRDEV 248
+ ++ G ++ +V L+ FVK + L A +F++MP R+ V
Sbjct: 189 SIFGFVIKTGYLQS-----------DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAV 237
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQ-------------- 290
+W MIT Q Y EA LF + D FT + ++S
Sbjct: 238 TWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297
Query: 291 ------------------------NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+G + AR IFD + + N SW AMI GYVQ D
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYD 357
Query: 327 M-ARELFEAM-----------------TCKNVASW----------------------NTM 346
A +LF M C N+A+ N++
Sbjct: 358 EEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSL 417
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I+ YA+SG I AR FD + + + IS+ +I YA++ SE++L LF E++ G +
Sbjct: 418 ISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASA 477
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
F S+LS A++ ++ G+Q+H +++K G + V NAL+ MY +CG++E A+ FE+
Sbjct: 478 FTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFED 537
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ D++VISW ++I G+A+HGF AL LF M G++P+++T + +LSACSH GLV +G
Sbjct: 538 MEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEG 597
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
++F SM ++GVIP +HY C+VD+LGR+G L EA + +MP++ DA W LGACR
Sbjct: 598 WKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACR 657
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++G EL + AA++I E EP + Y+LLSNLYA+ +W +VS +R M+++ + K G
Sbjct: 658 VHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGC 717
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHM 706
SW+EV+NKVH F VGDT HP+ IY L+ L K+K+ G+V + VLHDV EE+KE +
Sbjct: 718 SWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKL 777
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
L HSEK+AVA+G++S +PIRV KNLR+C DCH+AIK+IS GR II+RD NRFHH
Sbjct: 778 LFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHH 837
Query: 767 FSGGSCSCGDYW 778
G CSC +YW
Sbjct: 838 IKDGRCSCNEYW 849
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/653 (39%), Positives = 384/653 (58%), Gaps = 16/653 (2%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQ 197
AR +F+ MP + WN M+ GY++ G ++A ++ MLE+ +E ++ LL + +
Sbjct: 72 ARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTR 131
Query: 198 NGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
+ ++ L + V N+L+ + + A+ +FDR D V+WN M
Sbjct: 132 DTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVM 191
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVF-TWTAMVSGYVQNGKVDEA-------RMIFDAMP 305
I+GY ++ E+ +LF+E V + +VS K+ + R + D
Sbjct: 192 ISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKI 251
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
E V NA+I Y MD A +F+ M ++V SW ++TG+ G++ ARN FD+
Sbjct: 252 EPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDK 311
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
MP+ D +SW A+I GY Q ++ L LF EM+ + + S+L+ CA+L +LELG
Sbjct: 312 MPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG 371
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+ + + K + FVGNAL+ MY CG+VE+A F + +D ISW +I G A +
Sbjct: 372 EWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN 431
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G+G++AL +F M I PD++T +G+L AC+H+G+V+KG ++F M +G+ PN H
Sbjct: 432 GYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAH 491
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y CMVDLLGRAG L EA ++KNMP +P++ WG+LLGACR++ E+AE AA+ I E+E
Sbjct: 492 YGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELE 551
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
PEN +YVLL N+YAA RW + +VR M DRG+KK G S +E+ VH F GD +H
Sbjct: 552 PENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVH 611
Query: 666 PEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
P+ IY+ L+E+ LK G+ T V D+GEEEKE + HSEKLA+A+G++S
Sbjct: 612 PQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGP 671
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IR++KNLR+C DCH K +SK+ R +I+RD RFHHF GSCSC DYW
Sbjct: 672 GVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 199/452 (44%), Gaps = 66/452 (14%)
Query: 6 RLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWN 65
+L+Q+HS I T I+ PA + K L ++ P + + WN
Sbjct: 34 QLKQIHSQTIC---TGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFV--WN 88
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVS------------------------------- 94
I + R GC +SA+ ++ M R +
Sbjct: 89 NMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKL 148
Query: 95 --------YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
NA+I Y L+G++ AR VFD+ + D+V+WNVMISGY R+K + LF
Sbjct: 149 GFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLF 208
Query: 147 EMMPKRDV----VSWNTMLSGYAQNGYADAARRIF----DRMLEKNEISWNGLLAAYVQN 198
+ M + V ++ ++LS ++ + +R+ D +E + N L+ Y
Sbjct: 209 DEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAAC 268
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
G ++ A +F++ + +V+SW +++ GF ++G A+ FD+MP RD VSW MI GY
Sbjct: 269 GDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYL 328
Query: 259 QNNYLAEAQRLFEE---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW-- 312
Q N E LF E A +K D FT ++++ G ++ I A +KN +
Sbjct: 329 QVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWI-KAYIDKNEIKIDS 387
Query: 313 ---NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ- 368
NA+I Y ++ A +F AM ++ SW +I G A +G A ++F +M +
Sbjct: 388 FVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKA 447
Query: 369 ---HDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
D ++ ++ SG + + F M
Sbjct: 448 SITPDEVTCIGVLCACTHSGMVDKGKKFFARM 479
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 159/338 (47%), Gaps = 18/338 (5%)
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ +AR +FD MP + W +I GY++ G ++ ++ EM G + + +L
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
+++ G++LH +VK+GF + FV NAL+ +Y G V A F+ DV+
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
+WN MI+GY R +++ LF+ M+ + + P IT+V +LSACS + G +
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKR-VHRY 245
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+D + P ++D+ G +D A + NM D +W A++ G+ L
Sbjct: 246 VKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMK-SRDVISWTAIVTGFTNLGQVGL 304
Query: 594 AEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLE 650
A F+ PE + + + + Y R+ +V + +M+ +K + T S L
Sbjct: 305 ARN----YFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILT 360
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+ +G+ I AY+++ E K+ D FV
Sbjct: 361 ACAHLGALELGEW-------IKAYIDKNEIKI--DSFV 389
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 146/345 (42%), Gaps = 57/345 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSY-------------------- 95
D+ WNV I+ + R+ D ++ +F+ M R SS++
Sbjct: 184 DVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH 243
Query: 96 ---------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
NA+I Y G +D A +FD M RD++SW +++G+ +
Sbjct: 244 RYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVG 303
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
ARN F+ MP+RD VSW M+ GY Q +F M ++ +E + +L A
Sbjct: 304 LARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACA 363
Query: 197 QNGRIE--EACMLFESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
G +E E + K ++ S+ N+L+ + + A IF+ MP RD++SW
Sbjct: 364 HLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTA 423
Query: 253 MITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP--- 305
+I G A N Y EA +F + + D T ++ +G VD+ + F M
Sbjct: 424 VIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQH 483
Query: 306 --EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
E N + M+ + + A E+ + M K N W +++
Sbjct: 484 GIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLL 528
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 158/373 (42%), Gaps = 57/373 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ---- 120
N I + +G A VF+ + V++N MISGY + Q D + ++FD+M +
Sbjct: 158 NALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVL 217
Query: 121 ----------------RDL-------------------VSWNVMISGYVRNKSLSAARNL 145
+DL V N +I Y + A +
Sbjct: 218 PSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGI 277
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
F+ M RDV+SW +++G+ G AR FD+M E++ +SW ++ Y+Q R +E
Sbjct: 278 FDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVL 337
Query: 206 MLFE--SKANWEVVSWN--SLMGGFVKQKRLGDAKWI---FDRMPVR-DEVSWNTMITGY 257
LF AN + + S++ L +WI D+ ++ D N +I Y
Sbjct: 338 SLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMY 397
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWN 313
+ +A R+F P +D +WTA++ G NG +EA +F M + + V+
Sbjct: 398 FNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCI 457
Query: 314 AMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP- 367
++ + +D ++ F MT + NVA + M+ ++G + A + MP
Sbjct: 458 GVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPV 517
Query: 368 QHDCISWAAIIAG 380
+ + I W +++
Sbjct: 518 KPNSIVWGSLLGA 530
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 106/268 (39%), Gaps = 53/268 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ W +T G A + F+ MP R VS+ AMI GYL + +F +M
Sbjct: 285 DVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQ 344
Query: 119 -----PQR----------------DLVSW-----------------NVMISGYVRNKSLS 140
P +L W N +I Y ++
Sbjct: 345 AANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVE 404
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYV 196
A +F MP RD +SW ++ G A NGY + A +F +ML+ +E++ G+L A
Sbjct: 405 KAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACT 464
Query: 197 QNGRIEEACMLFESKANWE-----VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
+G +++ F V + ++ + L +A + MPV+ + + W
Sbjct: 465 HSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVW 524
Query: 251 NTMITG--YAQNNYLAE--AQRLFEEAP 274
+++ ++ +AE AQ++ E P
Sbjct: 525 GSLLGACRVHRDEEMAEMAAQQILELEP 552
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 120/291 (41%), Gaps = 53/291 (18%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK--CGSVEEAY 461
L ++P S++ TC ++A L KQ+H Q + G + V ++ CK G +E A
Sbjct: 17 LPQTPPLSLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYAR 73
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + + WN MI GY+R G A+ ++ M G+ PD+ T +L +
Sbjct: 74 MVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDT 133
Query: 522 LVEKGTE---------------------YFYSMNRDY----GVIPNSKH-----YTCMVD 551
V+ G E + YS++ + GV S + M+
Sbjct: 134 AVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMIS 193
Query: 552 LLGRAGRLDEAQNL---MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI--FEMEP 606
R+ + DE+ L M+ M P + T ++L AC + ++ + ++EP
Sbjct: 194 GYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEP 253
Query: 607 ----ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK----VTGYSWL 649
ENA L ++YAA G + M+ R V VTG++ L
Sbjct: 254 VRVLENA-----LIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNL 299
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/679 (38%), Positives = 404/679 (59%), Gaps = 21/679 (3%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYADAARRI 176
RD + +I Y + K L + L ++ N +++ Y++ G D A ++
Sbjct: 3 RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKRLGDA 235
FD M ++N +SW +++ QN + EA F + EV + + LG
Sbjct: 63 FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122
Query: 236 KW------IFDRMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+ + + + E+ + + Y++ + +A ++FEE P KD +WTAM+ GY
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182
Query: 289 VQNGKVDEARMIFDAM-PEKNTVSWNAM---IAGYVQTKRMDMARELFEAMTC----KNV 340
+ G+ +EA + F M E+ T+ + + + K R + ++ ++
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQ-HDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N + Y+++G++ A N+F + + +S+ +I GY ++ E L +F+E++R
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G N F+S++ CAN A+LE G QLH Q++K+ F+ FV + L+ MY KCG +E+
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 362
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A AF+EI D I+WN++++ + +HG GKDA+ +FE M G+KP+ IT + +L+ CSH
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 422
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
GLVE+G +YFYSM++ YGV+P +HY+C++DLLGRAGRL EA+ + MPFEP+A W
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
+ LGACR++G E+ + AAE + ++EP+N+G VLLSN+YA +W DV VR++MRD
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 542
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
VKK+ GYSW++V K H F D HP K IY L+ L ++K G+V T V D+
Sbjct: 543 VKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMD 602
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
+ KE +L HSE++AVA+ ++S+P G+PI V KNLRVC DCH+AIK ISK+ GR II+R
Sbjct: 603 DSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVR 662
Query: 760 DNNRFHHFSGGSCSCGDYW 778
DN+RFHHF+ GSCSCGDYW
Sbjct: 663 DNSRFHHFTDGSCSCGDYW 681
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 176/392 (44%), Gaps = 38/392 (9%)
Query: 68 ITTHMRN-----GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
+T H+ N G D AL +F++MP+R+ VS+ AMISG N + A + F M
Sbjct: 42 LTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICG 101
Query: 123 LVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYADAAR 174
V S +R S+ + + + K + S + + Y++ G A
Sbjct: 102 EVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDAC 161
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV----SWNSLMG--GFVK 228
++F+ M K+E+SW ++ Y + G EEA + F+ + EV S +G G +K
Sbjct: 162 KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALK 221
Query: 229 QKRLGDA------KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE-EAPVKDVFTW 281
+ G + K F+ D N + Y++ + A +F ++ ++V ++
Sbjct: 222 ACKFGRSVHSSVVKLGFE----SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSY 277
Query: 282 TAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
T ++ GYV+ ++++ +F + E N +++++I ++ +L +
Sbjct: 278 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337
Query: 338 KNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
N + ++ Y + G + A FD + I+W ++++ + Q G +D++++
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKI 397
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
F M G + N F S+L+ C++ +E G
Sbjct: 398 FERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/551 (43%), Positives = 350/551 (63%), Gaps = 2/551 (0%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGR 200
AR LF+ P+RDVVSW ++S YA+ G AR +FDR +N ++W LL+ Y + G
Sbjct: 59 ARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGL 118
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++EA +LF+ VVSWN+++ + R GDA +FDRMPVRD SWN ++ ++
Sbjct: 119 VDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRS 178
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
+ +A+ LF P +DV WT MV G ++G VDEAR++FD+MPE+N VSWNAMI+GY
Sbjct: 179 GSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYT 238
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ R+D A +LF M +++AS N MITG+ Q+ ++ AR LFD MP+ + ++W ++ G
Sbjct: 239 RNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNG 298
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Y + SE SL LF M G R N+ F L C++LA+L GKQ+H + K F+
Sbjct: 299 YLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVD 358
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
FVG+AL+ +Y KCG V A F+ +KD+ISWN +IA YA HG G +A+ L+E M+
Sbjct: 359 TFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQG 418
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G +P+D+T V +LSACSH+GLV++G + F SM D + +HYTC++DL RAGRLD
Sbjct: 419 NGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLD 478
Query: 561 EAQNLMKNMPFEP-DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
+A+ L+ + +P + W ALLG C +G + AA + + EP+NAG Y LLSN+Y
Sbjct: 479 DAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIY 538
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A++G+W + +++R +M +RG+KK G SW+EV NKVH F D H E D IY L+ +
Sbjct: 539 ASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNIH 598
Query: 680 FKLKQDGFVYS 690
+ ++ G V S
Sbjct: 599 YMMRIVGTVPS 609
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 258/536 (48%), Gaps = 86/536 (16%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISGYVRNKS 138
A +F+ P R VS+ A++S Y G L AR +FD+ +R++V+W ++SGY R
Sbjct: 59 ARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGL 118
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ A LF+ MP+R+VVSWNTML YA G A A +FDRM ++ SWN LLA V++
Sbjct: 119 VDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRS 178
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
G +++A LF +V++W +++ G + + +A+ +FD MP R+ VSWN MI+GY
Sbjct: 179 GSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYT 238
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
+N+ L EA LF + P +D+ + M++G++QN + AR +FD MPE+N V+W M+ G
Sbjct: 239 RNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNG 298
Query: 319 YVQTKRMDMARELFEAM-----------------TCKNVASW------------------ 343
Y++ K+ +++ LF M C ++A+
Sbjct: 299 YLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVD 358
Query: 344 ----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+ ++ YA+ GE+ AR LFD + D ISW IIA YA G +++ L+ +M+
Sbjct: 359 TFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQG 418
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G R N + +LS C++ G V+E
Sbjct: 419 NGYRPNDVTYVVLLSACSH-----------------------------------SGLVDE 443
Query: 460 AYHAFEEIVDKDVIS-----WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM-VGI 513
FE +V+ I+ + +I +R G DA L +K IKP ++ +
Sbjct: 444 GLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLK---IKPASGSVWSAL 500
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
L C+ G G + N N+ YT + ++ AG+ EA + M
Sbjct: 501 LGGCNAHGNESIGN--LAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEM 554
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 196/387 (50%), Gaps = 48/387 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ W ++ + R G D A +F MP+R+ VS+N M+ Y + G+ A +FD+MP
Sbjct: 102 NVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMP 161
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
RD SWN++++ VR+ S+ AR LF MP+RDV++W TM+ G A++G D AR +FD
Sbjct: 162 VRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDS 221
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M E+N +SWN +++ Y +N R++EA LF + ++ S N ++ GF++ K L A+ +F
Sbjct: 222 MPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLF 281
Query: 240 DRMPVRDEVSWNTMITGYAQNN-----------------------------------YLA 264
D MP R+ V+W TM+ GY + L
Sbjct: 282 DEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLC 341
Query: 265 EA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
E Q + + A D F +A+++ Y + G+V AR +FD EK+ +SWN +IA Y
Sbjct: 342 EGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYA 401
Query: 321 QTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS--- 373
A L+E M N ++ +++ + SG + +F+ M I+
Sbjct: 402 HHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRD 461
Query: 374 --WAAIIAGYAQSGYSEDSLRLFIEMK 398
+ +I +++G +D+ RL +K
Sbjct: 462 EHYTCLIDLCSRAGRLDDAKRLIHYLK 488
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 190/407 (46%), Gaps = 59/407 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN+ + +R+G D A +F MP R +++ M+ G +G +D AR +FD MP
Sbjct: 164 DAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMP 223
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+R++VSWN MISGY RN L A +LF MP RD+ S N M++G+ QN AR++FD
Sbjct: 224 ERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDE 283
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFES----------------------------- 210
M E+N ++W ++ Y++ + E + LF
Sbjct: 284 MPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEG 343
Query: 211 --------KANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
K ++V ++ ++LM + K +G A+ +FD +D +SWN +I YA +
Sbjct: 344 KQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHH 403
Query: 261 NYLAEAQRLFEEAP-----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---- 311
EA L+E+ DV T+ ++S +G VDE IF++M +++
Sbjct: 404 GVGIEAIHLYEKMQGNGYRPNDV-TYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDE 462
Query: 312 -WNAMIAGYVQTKRMDMARELFEAMTCKNVAS--WNTMITGYAQSGEIT----HARNLFD 364
+ +I + R+D A+ L + K + W+ ++ G G + ARNL
Sbjct: 463 HYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQ 522
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
P + ++ + YA +G +++ + EM G L + P S
Sbjct: 523 AEPD-NAGTYTLLSNIYASAGKWKEAAEIRSEMNNRG--LKKQPGCS 566
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 182/371 (49%), Gaps = 42/371 (11%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD-AMPEKNT 309
N +I A + +A++LF+ P +DV +WTA+VS Y + G + +AR +FD + +N
Sbjct: 44 NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNV 103
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA------------------ 351
V+W A+++GY + +D A LF+ M +NV SWNTM+ YA
Sbjct: 104 VTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVR 163
Query: 352 -------------QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+SG + AR LF RMP+ D ++W ++ G A+SG +++ LF M
Sbjct: 164 DAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMP 223
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
ER N + +++S L+ L ++ A C N ++ + + ++
Sbjct: 224 ---ER-NVVSWNAMISGYTRNHRLDEALDLFTKMPHRDI-ASC---NIMITGFIQNKDLK 275
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A F+E+ +++V++W TM+ GY + + +L LF M GI+P+ +T +G L ACS
Sbjct: 276 RARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACS 335
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
+ +G + + M ++ + ++++ + G + A+ L ++ E D +W
Sbjct: 336 DLATLCEGKQ-VHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLF-DLSREKDLISW 393
Query: 579 GALLGACRLYG 589
++ A +G
Sbjct: 394 NGIIAAYAHHG 404
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 53/262 (20%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N +I A +G + AR LFD P+ D +SW A+++ YA+ G D+ LF R R
Sbjct: 44 NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLF---DRSDAR 100
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N +T++LS Y + G V+EA
Sbjct: 101 RNVVTWTALLSG-----------------------------------YARAGLVDEAEVL 125
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+ + ++V+SWNTM+ YA G DA LF+ M +I +L+ +G V
Sbjct: 126 FQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNI----LLAMLVRSGSV 181
Query: 524 EKGTEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+K E F M RD +T MVD + R+G +DEA+ L +MP E + +W A++
Sbjct: 182 DKARELFGRMPERDV------MAWTTMVDGVARSGNVDEARLLFDSMP-ERNVVSWNAMI 234
Query: 583 GACRLYGKTELAEKAAEVIFEM 604
Y + ++A ++ +M
Sbjct: 235 SG---YTRNHRLDEALDLFTKM 253
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/568 (42%), Positives = 368/568 (64%), Gaps = 15/568 (2%)
Query: 130 ISGYVRNKSLSAARNLFEMMPKRD------VVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
I G+ S++ R +P++D V N M++ +++G ARR+FD M E
Sbjct: 37 IPGFYLYHSINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREP 96
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+ I+W +++ Y++ G IEEA LF+ A VV+W +++GG+++ ++ DA+ +F+ M
Sbjct: 97 DVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM 156
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
P ++ VSWNTMI GYAQN + A LFE+ P ++V +W ++S Q G+++EAR +FD
Sbjct: 157 PNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFD 216
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
MPE++ +SW AMIAG +D A +LFE M +++ SWNTMITG Q+G++ AR L
Sbjct: 217 RMPERDVISWTAMIAGL-----LDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKL 271
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLAS 421
F+ MP+ + ISW +I G Q G SE++L++F M G + N+ F SVL C+NLA
Sbjct: 272 FNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAG 331
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE--IVDKDVISWNTMI 479
L G+Q+H + K ++ FV +AL+ MY KCG + A F++ +D++SWN +I
Sbjct: 332 LGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGII 391
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
A YA HG+GK+A+ F+ M+ G KPDD+T VG+LSACSH GLVE+G +YF + +D +
Sbjct: 392 AAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSI 451
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ HY C+VDL GRAGRL EA ++ + +P A WGALL C ++ ++ ++AA+
Sbjct: 452 LVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAK 511
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPENAG Y+LLSN+YA++G+W + ++VRLKM+D+G+KK G SW+EV N+VH F
Sbjct: 512 KLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFV 571
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGF 687
VGD H + IY+ L +L K+K+ G+
Sbjct: 572 VGDKSHSQSKLIYSLLRDLHSKMKKAGY 599
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 265/482 (54%), Gaps = 41/482 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ + N IT ++G A +F+ M +++ +ISGY+ G ++ AR++FD+
Sbjct: 64 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 123
Query: 118 M-PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+ ++++V+W M+ GY+R+ +S A LF MP ++VVSWNTM+ GYAQNG D+A +
Sbjct: 124 VDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYL 183
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
F++M E+N +SWN +++ Q GRIEEA LF+ +V+SW +++ G L +A
Sbjct: 184 FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGL-----LDEAL 238
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+F+RMP RD SWNTMITG QN L A++LF E P K+V +WT M++G VQ G+ +E
Sbjct: 239 DLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEE 298
Query: 297 ARMIFDAMPEKNTVSWN-----------AMIAGYVQTKRMD--MARELFEAMTCKNVASW 343
A IF M N N + +AG + +++ +++ +++ T V S
Sbjct: 299 ALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTF--VVS- 355
Query: 344 NTMITGYAQSGEITHARNLFDR--MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+I Y++ GE+ AR +FD Q D +SW IIA YA GY ++++ F EM++ G
Sbjct: 356 -ALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSG 414
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN---ALLVMYC-KCGSV 457
+ + + +LS C++ +E G + +LVK + V A LV C + G +
Sbjct: 415 FKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK---DRSILVREDHYACLVDLCGRAGRL 471
Query: 458 EEAYHAFEEIVDK-DVISWNTMIAGYARHG---FGKDALMLFESMKTVGIKPDDITMVGI 513
+EA+ E + K W ++AG H GK A + K + ++P++ +
Sbjct: 472 KEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQA-----AKKLLEVEPENAGTYLL 526
Query: 514 LS 515
LS
Sbjct: 527 LS 528
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 288/839 (34%), Positives = 445/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N+ I + +NG A VF + R VS+ AM+SGY G A +++ QM
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 119 PQRDLVS---------------------------------WNVMISGYVRNKSLSAARNL 145
P ++S N +I+ Y+ S A +
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M D V++NT++SG+AQ G+ + A +IFD M L + ++ LLAA G +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 202 EEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
++ L ++ +++ ++ SL+ +VK + A IF+ + V WN M+ Y
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 258 AQNNYLAEAQRLFEEAPVKDV----FTW-----TAMVSGYVQNGK--------------- 293
Q + LA++ +F + + FT+ T +G ++ G+
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDM 381
Query: 294 ---------------VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-- 336
+D+AR I + + +++ VSW +MIAGYVQ + A F+ M
Sbjct: 382 YVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC 441
Query: 337 -------------------------------------CKNVASWNTMITGYAQSGEITHA 359
+++ WNT++ YA+ G A
Sbjct: 442 GVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEA 501
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+LF + D I+W +I+G+ QS E +L +F++M + G + N F S +S ANL
Sbjct: 502 FSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANL 561
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A ++ GKQ+HG+ VK G + V NAL+ +Y KCGS+E+A F E+ ++ +SWNT+I
Sbjct: 562 ADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTII 621
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
++HG G +AL LF+ MK G+KP+D+T +G+L+ACSH GLVE+G YF SM+ YG+
Sbjct: 622 TSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGL 681
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P HY C+VD+LGRAG+LD A+ + MP +A W LL AC+++ E+ E AA+
Sbjct: 682 NPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAK 741
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP ++ YVLLSN YA +G+W + +VR M+DRG++K G SW+EV+N VH F
Sbjct: 742 HLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFF 801
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP D+IY +L EL +L + G+ + H+ +E+K+ HSEKLAVA+G
Sbjct: 802 VGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFG 861
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++++P P+RV+KNLRVC+DCH+ +K S++ R I+LRD RFHHF+ GSCSCGDYW
Sbjct: 862 LMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 253/545 (46%), Gaps = 43/545 (7%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D + N++I Y +N + AR +F+ + RD VSW MLSGYAQ G A R++ +M
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQM- 135
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
W ++ + AC G Q R+ A+ ++ +
Sbjct: 136 -----HWTAVIPTPYVLSSVLSACT----------------KGKLFAQGRMIHAQ-VYKQ 173
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
+ N +I Y A+R+F + D T+ ++SG+ Q G + A IF
Sbjct: 174 AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233
Query: 302 DAMP----EKNTVSWNAMIAGYVQTKRMDMARE----LFEAMTCKNVASWNTMITGYAQS 353
D M + V+ +++A + ++ L +A + + +++ Y +
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC 293
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G+I A ++F+ + + + W ++ Y Q S +F +M+ G N+ + +L
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCIL 353
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
TC +ELG+Q+H +K GFE+ +V L+ MY K +++A E + +DV+
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVV 413
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SW +MIAGY +H F ++AL F+ M+ G+ PD+I + SAC+ + +G + ++
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ-IHAR 472
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
G + + +V+L R GR +EA +L + + + D TW L+ +G++ L
Sbjct: 473 VYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISG---FGQSRL 528
Query: 594 AEKAAEVIFEMEPENA--GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY-SWLE 650
E+A V +M A ++ +S + +A D+ + + ++ R VK TG+ S E
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAI-SALANLADIKQGK-QVHGRAVK--TGHTSETE 584
Query: 651 VQNKV 655
V N +
Sbjct: 585 VANAL 589
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 174/375 (46%), Gaps = 33/375 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQV----F 115
WN+ + + + + +F M + +Y ++ GQ++ Q+
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSI 373
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ D+ V+I Y + + L AR + EM+ KRDVVSW +M++GY Q+ + + A
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433
Query: 176 IFDRMLEKNEISWN-GLLAAYVQNGRIEEA-------CMLFESKANWEVVSWNSLMGGFV 227
F M + N GL +A I+ ++ S ++ WN+L+ +
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYA 493
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTA 283
+ R +A +F + +DE++WN +I+G+ Q+ +A +F +A K +VFT+ +
Sbjct: 494 RCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFIS 553
Query: 284 MVSGY-----VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+S ++ GK R + + V+ NA+I+ Y + ++ A+ +F M+ +
Sbjct: 554 AISALANLADIKQGKQVHGRAVKTGHTSETEVA-NALISLYGKCGSIEDAKMIFSEMSLR 612
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLF 394
N SWNT+IT +Q G A +LFD+M Q +++ ++A + G E+ L F
Sbjct: 613 NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYF 672
Query: 395 IEMKR-YGERLNRSP 408
M YG LN P
Sbjct: 673 KSMSNVYG--LNPIP 685
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 174/405 (42%), Gaps = 43/405 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPR----------RSSVSYNAMISGYLLNGQLD 109
D+ W I ++++ C+ AL F M S+ S A I + L
Sbjct: 411 DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKA--MRQGLQ 468
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+V+ D+ WN +++ Y R A +LF + +D ++WN ++SG+ Q+
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNS 221
+ A +F +M + N ++ ++A I++ + ++ E N+
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--- 278
L+ + K + DAK IF M +R+EVSWNT+IT +Q+ EA LF++ + +
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 279 -FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV-------QTKRMDMARE 330
T+ +++ G V+E F +M N N + Y + ++D AR
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSM--SNVYGLNPIPDHYACVVDILGRAGQLDRARR 706
Query: 331 LFEAM-TCKNVASWNTMITGYA-----QSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ M N W T+++ + GE+ A++L + P HD S+ + YA +
Sbjct: 707 FVDEMPITANAMIWRTLLSACKVHKNIEIGELA-AKHLLELEP-HDSASYVLLSNAYAVT 764
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
G + ++ MK G R + P S + + + +G +LH
Sbjct: 765 GKWANRDQVRKMMKDRGIR--KEPGRSWIEVKNAVHAFFVGDRLH 807
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 11/247 (4%)
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL-ELGKQLHGQLVKVGFEAGCFVGNA 446
E L L + L + T L C + L ++H V G A +GN
Sbjct: 24 EKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNL 83
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ +Y K G V +A F+E+ +D +SW M++GYA+ G GK+A L+ M + P
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPT 143
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+ +LSAC+ L +G ++ + ++ L G A+ +
Sbjct: 144 PYVLSSVLSACTKGKLFAQG-RMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVF 202
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAASG 623
+M F D T+ L+ G E A + IF+ E + +G+ V +++L AA
Sbjct: 203 CDMLF-CDRVTFNTLISGHAQCGHGECALQ----IFD-EMQLSGLRPDCVTVASLLAACA 256
Query: 624 RWGDVSK 630
GD+ K
Sbjct: 257 SVGDLQK 263
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/552 (44%), Positives = 352/552 (63%), Gaps = 19/552 (3%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMPVRDE 247
N ++A V++G I+ A +F VSWNSL+ G K R+ +A +FD +P D
Sbjct: 65 NKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
S+N M++ Y +N +AQ F P KD +W M++GY + G++++AR++F +M EK
Sbjct: 125 FSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVLFYSMMEK 184
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
N VSWNAMI+GY++ ++ A F+A + V +W MITGY ++ ++ A +F M
Sbjct: 185 NEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 368 -QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ + ++W A+I+GY ++ ED L+LF M G R N S +S L C+ L++L LG+
Sbjct: 245 VKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALCLGR 304
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H +VMYCKCG + +A+ FE + KDV++WN MI+GYA+HG
Sbjct: 305 QIHQ-----------------IVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHG 347
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+ AL LF M+ KPD IT V +L AC+H GLV+ G YF SM RDY V P HY
Sbjct: 348 NAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHY 407
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
TCMVDLLGRAG+++EA L+++MPF P AA +G LLGACR++ ELAE AAE + E++P
Sbjct: 408 TCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLELDP 467
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
NA YV L+N+YA+ W DV++VR +M++ V KV GYSW+E++NK+H F D +HP
Sbjct: 468 RNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKIHHFRSSDRIHP 527
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
E D I+ L+ELE K+K G+ + LH+V EE+KE +L +HSEKLAVA+G + +P G
Sbjct: 528 ELDSIHKKLKELERKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQG 587
Query: 727 RPIRVMKNLRVC 738
PI+V KNLR+C
Sbjct: 588 SPIQVFKNLRIC 599
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 223/421 (52%), Gaps = 48/421 (11%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR- 112
KP+ + I N I T +R+G D AL VF+ M +++VS+N+++ G DP+R
Sbjct: 54 KPSDEDQIFPLNKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGI----SKDPSRM 109
Query: 113 ----QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+FD++P+ D S+N+M+S YVRN + A++ F MP +D SWNTM++GYA+ G
Sbjct: 110 MEAHQLFDEIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRG 169
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ AR +F M+EKNE+SWN +++ Y++ G +E+A F++ VV+W +++ G++K
Sbjct: 170 EMEKARVLFYSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMK 229
Query: 229 QKRLGDAKWIFDRMPVRDE-VSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTA 283
K++ A+ +F M V+ V+WN MI+GY +N+ + +LF EE + ++
Sbjct: 230 AKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 284 MVSG------------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
+ G Y + G++ +A +F+AM +K+ V+WNAMI+GY Q
Sbjct: 290 ALLGCSELSALCLGRQIHQIVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHGNA 349
Query: 326 DMARELFEAM-TCKNVASWNTMIT---GYAQSGEITHARNLFDRM-------PQHDCISW 374
+ A LF M K W T + +G + FD M P+ D +
Sbjct: 350 EKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPD--HY 407
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
++ ++G E++L+L M R + + F ++L C ++EL + +L++
Sbjct: 408 TCMVDLLGRAGKVEEALKLIRSMPF---RPHAAVFGTLLGACRVHKNVELAEFAAEKLLE 464
Query: 435 V 435
+
Sbjct: 465 L 465
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 289/839 (34%), Positives = 445/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N+ I + +NG A VF + R VS+ AM+SGY +G A +++ QM
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 119 PQRDLVS---------------------------------WNVMISGYVRNKSLSAARNL 145
P ++S N +I+ Y+ S A +
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M D V++NT++SG+AQ G+ + A +IFD M L + ++ LLAA G +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 202 EEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
++ L ++ +++ ++ SL+ +VK + A IF+ + V WN M+ Y
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 258 AQNNYLAEAQRLFEEA----------------------------------PVKDVFTWTA 283
Q + LA++ +F + +K+ F
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDM 381
Query: 284 MVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-- 336
VSG Y + G +D+AR I + + +++ VSW +MIAGYVQ + A F+ M
Sbjct: 382 YVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC 441
Query: 337 -------------------------------------CKNVASWNTMITGYAQSGEITHA 359
+++ WNT++ YA+ G A
Sbjct: 442 GVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEA 501
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+LF + D I+W +I+G+ QS + +L +F++M + G + N F S +S ANL
Sbjct: 502 FSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANL 561
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A ++ GKQ+HG+ VK G + V NAL+ +Y KCGS+E+A F E+ ++ +SWNT+I
Sbjct: 562 ADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTII 621
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
++HG G +AL LF+ MK G+KP+D+T +G+L+ACSH GLVE+G YF SM+ YG+
Sbjct: 622 TSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGL 681
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P HY C+VD+LGRAG+LD A+ + MP +A W LL AC+++ E+ E AA+
Sbjct: 682 NPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAK 741
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP ++ YVLLSN YA +G+W + +VR M+DRG++K G SW+EV+N VH F
Sbjct: 742 HLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFF 801
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP D+IY +L EL +L + G+ + H+ +E+K+ HSEKLAVA+G
Sbjct: 802 VGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFG 861
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++++P P+RV+KNLRVC+DCH+ +K S++ R I+LRD RFHHF+ GSCSCGDYW
Sbjct: 862 LMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 255/545 (46%), Gaps = 43/545 (7%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D + N++I Y +N + AR +F+ + RD VSW MLSGYAQ+G A R++ +M
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQM- 135
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
W ++ + AC G Q R+ A+ ++ +
Sbjct: 136 -----HWTAVIPTPYVLSSVLSACT----------------KGKLFAQGRMIHAQ-VYKQ 173
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
+ N +I Y A+R+F + D T+ ++SG+ Q G + A IF
Sbjct: 174 AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233
Query: 302 DAMP----EKNTVSWNAMIAGYVQTKRMDMARE----LFEAMTCKNVASWNTMITGYAQS 353
D M + V+ +++A + ++ L +A + + +++ Y +
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC 293
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G+I A ++F+ + + + W ++ Y Q S +F +M+ G N+ + +L
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCIL 353
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
TC +ELG+Q+H +K GFE+ +V L+ MY K G +++A E + +DV+
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVV 413
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SW +MIAGY +H F ++AL F+ M+ G+ PD+I + SAC+ + +G + ++
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ-IHAR 472
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
G + + +V+L R GR +EA +L + + + D TW L+ +G++ L
Sbjct: 473 VYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHK-DEITWNGLISG---FGQSRL 528
Query: 594 AEKAAEVIFEMEPENA--GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY-SWLE 650
++A V +M A ++ +S + +A D+ + + ++ R VK TG+ S E
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAI-SALANLADIKQGK-QVHGRAVK--TGHTSETE 584
Query: 651 VQNKV 655
V N +
Sbjct: 585 VANAL 589
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 171/375 (45%), Gaps = 33/375 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQV----F 115
WN+ + + + + +F M + +Y ++ GQ++ Q+
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSI 373
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ D+ V+I Y + L AR + EM+ KRDVVSW +M++GY Q+ + + A
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433
Query: 176 IFDRMLEKNEISWN-GLLAAYVQNGRIEEA-------CMLFESKANWEVVSWNSLMGGFV 227
F M + N GL +A I+ ++ S ++ WN+L+ +
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYA 493
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTA 283
+ R +A +F + +DE++WN +I+G+ Q+ +A +F + +VFT+ +
Sbjct: 494 RCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFIS 553
Query: 284 MVSGY-----VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+S ++ GK R + + V+ NA+I+ Y + ++ A+ +F M+ +
Sbjct: 554 AISALANLADIKQGKQVHGRAVKTGHTSETEVA-NALISLYGKCGSIEDAKMIFSEMSLR 612
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLF 394
N SWNT+IT +Q G A +LFD+M Q +++ ++A + G E+ L F
Sbjct: 613 NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYF 672
Query: 395 IEMKR-YGERLNRSP 408
M YG LN P
Sbjct: 673 KSMSNVYG--LNPIP 685
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 173/405 (42%), Gaps = 43/405 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPR----------RSSVSYNAMISGYLLNGQLD 109
D+ W I ++++ C+ AL F M S+ S A I + L
Sbjct: 411 DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKA--MRQGLQ 468
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+V+ D+ WN +++ Y R A +LF + +D ++WN ++SG+ Q+
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRL 528
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNS 221
A +F +M + N ++ ++A I++ + ++ E N+
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--- 278
L+ + K + DAK IF M +R+EVSWNT+IT +Q+ EA LF++ + +
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 279 -FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV-------QTKRMDMARE 330
T+ +++ G V+E F +M N N + Y + ++D AR
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSM--SNVYGLNPIPDHYACVVDILGRAGQLDRARR 706
Query: 331 LFEAM-TCKNVASWNTMITGYA-----QSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ M N W T+++ + GE+ A++L + P HD S+ + YA +
Sbjct: 707 FVDEMPITANAMIWRTLLSACKVHKNIEIGELA-AKHLLELEP-HDSASYVLLSNAYAVT 764
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
G + ++ MK G R + P S + + + +G +LH
Sbjct: 765 GKWANRDQVRKMMKDRGIR--KEPGRSWIEVKNAVHAFFVGDRLH 807
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 11/247 (4%)
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL-ELGKQLHGQLVKVGFEAGCFVGNA 446
E L L + L + T L C + L ++H V G A +GN
Sbjct: 24 EKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNL 83
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ +Y K G V +A F+E+ +D +SW M++GYA+ G GK+A L+ M + P
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPT 143
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+ +LSAC+ L +G ++ + ++ L G A+ +
Sbjct: 144 PYVLSSVLSACTKGKLFAQG-RMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVF 202
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAASG 623
+M F D T+ L+ G E A + IF+ E + +G+ V +++L AA
Sbjct: 203 CDMLF-CDRVTFNTLISGHAQCGHGECALQ----IFD-EMQLSGLRPDCVTVASLLAACA 256
Query: 624 RWGDVSK 630
GD+ K
Sbjct: 257 SVGDLQK 263
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 283/818 (34%), Positives = 451/818 (55%), Gaps = 96/818 (11%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQL 108
P +++ N + ++ R+ AL++F S+ P S++S I L+G+L
Sbjct: 52 PHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKL 111
Query: 109 DPARQVFDQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
RQV Q + LV ++ Y++ ++++ R +F+ M +R+VVSW ++L+GY
Sbjct: 112 --GRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGY 169
Query: 165 AQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI----EEACMLFESKANWEV 216
+ NG +F +M + N + + ++AA V G + + M+ + +
Sbjct: 170 SWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAI 229
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------ 270
+NSL+ + + L DA+ +FD+M +RD V+WN+MI GY +N E +F
Sbjct: 230 PVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLA 289
Query: 271 --------------------EEAPVK-------------DVFTWTAMVSGYVQNGKVDEA 297
E A VK D TA++ + ++D+A
Sbjct: 290 GVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDA 349
Query: 298 RMIFDAMPE-KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMIT---- 348
+F M E KN VSW AMI+G +Q D A LF M + V +++ ++T
Sbjct: 350 LSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYP 409
Query: 349 ---------------------------GYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
Y + G A +F+ + D ++W+A++AGY
Sbjct: 410 VFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGY 469
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN-LASLELGKQLHGQLVKVGFEAG 440
AQ+G +E++ +LF ++ + G + N F+SV++ CA+ A+ E GKQ H +K+
Sbjct: 470 AQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNA 529
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
V +AL+ MY K G+++ A+ F+ ++D++SWN+MI+GY++HG K AL +F+ M+
Sbjct: 530 LCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQK 589
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
+ D +T +G+++AC+H GLVEKG +YF SM D+ + P KHY+CM+DL RAG L+
Sbjct: 590 RNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLE 649
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
+A ++ MPF P A W LLGA R++ EL E AAE + ++PE++ YVLLSN+YA
Sbjct: 650 KAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYA 709
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
A+G W + + VR M R VKK GYSW+EV+NK ++F GD HP ++IY+ L EL
Sbjct: 710 AAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSI 769
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
+LK G+ TK V HD+ +E+KE +L +HSE+LA+A+G+++ P PI+++KNLRVC D
Sbjct: 770 RLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGD 829
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CHN K +S + R I++RD+NRFHHF G CSCGDYW
Sbjct: 830 CHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 359 ARNLFDRMPQHDCI--SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A NLFD++P ++ Y++ ++++L LF+ + + + S + V + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A +LG+Q+H Q VK G VG +L+ MY K +V + F+E+ +++V+SW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
+++AGY+ +G LF M+ G+ P+ T+ +++A + G+V G + ++M
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQ-VHAMVVK 222
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+G + ++ L R G L +A+++ M D TW +++
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIA 268
>gi|302760949|ref|XP_002963897.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
gi|300169165|gb|EFJ35768.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
Length = 714
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/703 (38%), Positives = 388/703 (55%), Gaps = 42/703 (5%)
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
FD + S NVM++ Y +N L A F+ P +DVVSWN MLSGYA+ G A+
Sbjct: 15 FDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDVVSWNGMLSGYARYGSFRDAK 74
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
FD M KN +S+N L++A+ + G + EA LF S + +WN L+ G+ ++
Sbjct: 75 LFFDEMPYKNTVSYNTLISAFARQGNLAEARNLFNSMKIRDAATWNVLIAGYTQRCLCTH 134
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
A+ IFDR PVR+ V+WNTMI GYAQ +L A LF P + W A++SG +N ++
Sbjct: 135 AREIFDRAPVRNVVTWNTMIGGYAQAGHLDNATELFGLMPQWNEVCWNALISGMGRNRRL 194
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
+A +F A+P ++ VSW AMI G V + + A +LF+ M +V W ++T +A SG
Sbjct: 195 PDALELFQALPFRDMVSWIAMIQGCVHSGDLHRAWDLFKRMPLTDVVIWTAIVTAFAHSG 254
Query: 355 EITHARNLFDRMP--------------------------------QHDCISWAAIIAGYA 382
+ AR+LFD +P D ISW A++A ++
Sbjct: 255 FLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKDLFDSAGDLRDVISWNALLAAFS 314
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-----KVGF 437
Q+G++ +L +F M G + F S L C L +L GK LH +L+ ++
Sbjct: 315 QNGHARQALGIFAGMDLEGIHPDGISFVSALDACTILTALREGKLLHEELLLASQGEIFV 374
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
EA + AL+ Y KCG ++EA F+ + D I N+M+ YA+ G +A LF+
Sbjct: 375 EAS--LATALVNFYAKCGRLDEARSLFDAMAFCDAILLNSMLGAYAQSGRAGEAADLFQR 432
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
GI PD +T V ++SACSH GL++ G YF S+ D+ + P++ HYTCMVDLL R G
Sbjct: 433 AILSGIHPDAVTFVSMVSACSHAGLLDLGHRYFLSLVGDFALAPHAAHYTCMVDLLARTG 492
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
L + ++L+ MPF+P+ W +LL CR +G + A P + YVLLS
Sbjct: 493 HLMDGEDLLDAMPFQPEYTAWKSLLAGCRTHGDVGRGARLARRATNANPVCSSPYVLLSR 552
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
LY A+G+ GD VR M R ++K G S + ++ + H F G HPE I L
Sbjct: 553 LYDAAGKHGDGISVRKAMDARRLRKPAGLSSITIKGRAHEFVAGGKNHPEISAILDELHS 612
Query: 678 LEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR--PIRVMKNL 735
L K+++ G+V T VLHD +EEKE L +HSEKLAV +G++S GR P+ V+KNL
Sbjct: 613 LNAKMREAGYVPDTSNVLHDFDDEEKEQSLSFHSEKLAVVFGMISTR-GRSDPLFVVKNL 671
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+C DCH A K +S+I R I +RD +RFHHF G+C+C D+W
Sbjct: 672 RMCTDCHTATKFMSRIAKRAITVRDAHRFHHFQDGACACADFW 714
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 222/447 (49%), Gaps = 27/447 (6%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
Y + G A FD + S N ++AAY QNG ++ A F+ N +VVSWN ++
Sbjct: 2 YGRCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDVVSWNGML 61
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
G+ + DAK FD MP ++ VS+NT+I+ +A+ LAEA+ LF ++D TW
Sbjct: 62 SGYARYGSFRDAKLFFDEMPYKNTVSYNTLISAFARQGNLAEARNLFNSMKIRDAATWNV 121
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW 343
+++GY Q AR IFD P +N V+WN MI GY Q +D A ELF M N W
Sbjct: 122 LIAGYTQRCLCTHAREIFDRAPVRNVVTWNTMIGGYAQAGHLDNATELFGLMPQWNEVCW 181
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N +I+G ++ + A LF +P D +SW A+I G SG ++ R +
Sbjct: 182 NALISGMGRNRRLPDALELFQALPFRDMVSWIAMIQGCVHSG----------DLHRAWDL 231
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA----GCFVGNALLVMYCKCGSVEE 459
R P T V+ A + + L Q + F+A NA++ Y G +
Sbjct: 232 FKRMPLTDVVIWTAIVTAFAHSGFL--QEARDLFDAIPIKDAAAVNAMIAAYGLHGEIAR 289
Query: 460 AYHAFEEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A F+ D +DVISWN ++A ++++G + AL +F M GI PD I+ V L AC+
Sbjct: 290 AKDLFDSAGDLRDVISWNALLAAFSQNGHARQALGIFAGMDLEGIHPDGISFVSALDACT 349
Query: 519 HTGLVEKGT----EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ +G E + + + + T +V+ + GRLDEA++L M F D
Sbjct: 350 ILTALREGKLLHEELLLASQGE--IFVEASLATALVNFYAKCGRLDEARSLFDAMAF-CD 406
Query: 575 AATWGALLGACRLYGKTELAEKAAEVI 601
A ++LGA Y ++ A +AA++
Sbjct: 407 AILLNSMLGA---YAQSGRAGEAADLF 430
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 235/478 (49%), Gaps = 57/478 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN ++ + R G A F+ MP +++VSYN +IS + G L AR +F+ M
Sbjct: 53 DVVSWNGMLSGYARYGSFRDAKLFFDEMPYKNTVSYNTLISAFARQGNLAEARNLFNSMK 112
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
RD +WNV+I+GY + + AR +F+ P R+VV+WNTM+ GYAQ G+ D A +F
Sbjct: 113 IRDAATWNVLIAGYTQRCLCTHAREIFDRAPVRNVVTWNTMIGGYAQAGHLDNATELFGL 172
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M + NE+ WN L++ +N R+ +A LF++ ++VSW +++ G V L A +F
Sbjct: 173 MPQWNEVCWNALISGMGRNRRLPDALELFQALPFRDMVSWIAMIQGCVHSGDLHRAWDLF 232
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
RMP+ D V W ++T +A + +L EA+ LF+ P+KD AM++ Y +G++ A+
Sbjct: 233 KRMPLTDVVIWTAIVTAFAHSGFLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKD 292
Query: 300 IFDAMPE-KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV------------------ 340
+FD+ + ++ +SWNA++A + Q A +F M + +
Sbjct: 293 LFDSAGDLRDVISWNALLAAFSQNGHARQALGIFAGMDLEGIHPDGISFVSALDACTILT 352
Query: 341 -----------------------ASWNT-MITGYAQSGEITHARNLFDRMPQHDCISWAA 376
AS T ++ YA+ G + AR+LFD M D I +
Sbjct: 353 ALREGKLLHEELLLASQGEIFVEASLATALVNFYAKCGRLDEARSLFDAMAFCDAILLNS 412
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
++ YAQSG + ++ LF G + F S++S C++ L+LG + LV
Sbjct: 413 MLGAYAQSGRAGEAADLFQRAILSGIHPDAVTFVSMVSACSHAGLLDLGHRYFLSLV--- 469
Query: 437 FEAGCFVGNALLVMY-CKCGSVEEAYHAF--EEIVDK-----DVISWNTMIAGYARHG 486
G F Y C + H E+++D + +W +++AG HG
Sbjct: 470 ---GDFALAPHAAHYTCMVDLLARTGHLMDGEDLLDAMPFQPEYTAWKSLLAGCRTHG 524
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 167/349 (47%), Gaps = 22/349 (6%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
W+ WN I+ RN AL +F ++P R VS+ AMI G + +G L A +F +M
Sbjct: 176 WNEVCWNALISGMGRNRRLPDALELFQALPFRDMVSWIAMIQGCVHSGDLHRAWDLFKRM 235
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P D+V W +++ + + L AR+LF+ +P +D + N M++ Y +G A+ +FD
Sbjct: 236 PLTDVVIWTAIVTAFAHSGFLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKDLFD 295
Query: 179 RMLE-KNEISWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFVKQKRLG 233
+ ++ ISWN LLAA+ QNG +A +F + + +S+ S + L
Sbjct: 296 SAGDLRDVISWNALLAAFSQNGHARQALGIFAGMDLEGIHPDGISFVSALDACTILTALR 355
Query: 234 DAKWIFDRMPVRD------EVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
+ K + + + + E S T ++ YA+ L EA+ LF+ D +M+
Sbjct: 356 EGKLLHEELLLASQGEIFVEASLATALVNFYAKCGRLDEARSLFDAMAFCDAILLNSMLG 415
Query: 287 GYVQNGKVDEARMIFD----AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----C 337
Y Q+G+ EA +F + + V++ +M++ +D+ F ++
Sbjct: 416 AYAQSGRAGEAADLFQRAILSGIHPDAVTFVSMVSACSHAGLLDLGHRYFLSLVGDFALA 475
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSG 385
+ A + M+ A++G + +L D MP Q + +W +++AG G
Sbjct: 476 PHAAHYTCMVDLLARTGHLMDGEDLLDAMPFQPEYTAWKSLLAGCRTHG 524
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 13/182 (7%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY +CG V +A F+ I + S N M+A YA++G+ A F+ D ++
Sbjct: 1 MYGRCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTP----NKDVVS 56
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
G+LS + G +F M N+ Y ++ R G L EA+NL +M
Sbjct: 57 WNGMLSGYARYGSFRDAKLFFDEMP-----YKNTVSYNTLISAFARQGNLAEARNLFNSM 111
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
DAATW L+ Y + L A E+ N + + YA +G + +
Sbjct: 112 KIR-DAATWNVLIAG---YTQRCLCTHAREIFDRAPVRNVVTWNTMIGGYAQAGHLDNAT 167
Query: 630 KV 631
++
Sbjct: 168 EL 169
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/572 (43%), Positives = 357/572 (62%), Gaps = 9/572 (1%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
+V WN L+ + K L DA+ +FD MP RD SWN M+ GYA+ L EA++LF+E
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVSWNAMIAGYVQTKR--MD 326
KD ++WTAMV+GYV+ + +EA +++ M P TVS A V+ R +
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ + A + W++++ Y + G I ARN+FD++ + D +SW ++I Y +S
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+ LF E+ ER N F VL+ CA+L + ELGKQ+HG + +VGF+ F ++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG++E A H + D++SW ++I G A++G +AL F+ + G KPD
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T V +LSAC+H GLVEKG E+FYS+ + + S HYTC+VDLL R+GR ++ ++++
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
MP +P W ++LG C YG +LAE+AA+ +F++EPEN YV ++N+YAA+G+W
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 539
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+ K+R +M++ GV K G SW E++ K H F DT HP ++I +L EL K+K++G
Sbjct: 540 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V +T LVLHDV +E+KE L YHSEKLAVA+ ILS G I+V KNLR C DCH AIK
Sbjct: 600 YVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIK 659
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS I R I +RD+ RFH F G CSCGDYW
Sbjct: 660 FISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 167/380 (43%), Gaps = 58/380 (15%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN + + + G A VF+ MP R S+N M++GY G L+ AR++FD+M ++D
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPK-------------------------------- 151
SW M++GYV+ A L+ +M +
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 152 --------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
D V W++++ Y + G D AR IFD+++EK+ +SW ++ Y ++ R E
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 204 ACMLF-ESKANWEVVSWNSLMGGF-----VKQKRLGDAKWIFDRMPVRDEVSW--NTMIT 255
LF E + E + + G + + LG + D S+ ++++
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VS 311
Y + + A+ + + P D+ +WT+++ G QNG+ DEA FD + + T V+
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-----WNTMITGYAQSGEITHARNLFDRM 366
+ +++ ++ E F ++T K+ S + ++ A+SG +++ M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 367 PQHDC-ISWAAIIAGYAQSG 385
P WA+++ G + G
Sbjct: 483 PMKPSKFLWASVLGGCSTYG 502
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 198/437 (45%), Gaps = 30/437 (6%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N ++ Y G L AR+VFD+MP RDL SWNVM++GY L AR LF+ M ++
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM------ 206
D SW M++GY + + A ++ M N + C+
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 207 ---LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ + + + V W+SLM + K + +A+ IFD++ +D VSW +MI Y +++
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 264 AEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAM 315
E LF E + +T+ +++ + + + M + + + +++
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDC 371
+ Y + ++ A+ + + ++ SW ++I G AQ+G+ A FD + + D
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP--FTSVLSTCANLASLELGKQLH 429
+++ +++ +G E L F + RL+ + +T ++ A E QL
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITE-KHRLSHTSDHYTCLVDLLARSGRFE---QLK 476
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSV---EEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+ ++ + F+ ++L G++ EEA +I ++ +++ TM YA G
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 487 FGKDALMLFESMKTVGI 503
++ + + M+ +G+
Sbjct: 537 KWEEEGKMRKRMQEIGV 553
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 18/242 (7%)
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
LR +++ ++ S + +++ C+ +LE GK++H + GF G + N LL M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCGS+ +A F+E+ ++D+ SWN M+ GYA G ++A LF+ M + D +
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSYSW 185
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG-------RLDEAQ 563
+++ E+ + M R +PNS+ V + A R E
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQR----VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ + D W +L+ +YGK ++A + ++ ++ + + + Y S
Sbjct: 242 GHIVRAGLDSDEVLWSSLMD---MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 624 RW 625
RW
Sbjct: 299 RW 300
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/667 (40%), Positives = 386/667 (57%), Gaps = 33/667 (4%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-----NEISWNGLL 192
SL A+ +F+ +P ++ +WNT++ YA + + IF RML + ++ ++ L+
Sbjct: 84 SLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLI 143
Query: 193 AAYVQNGRIEEACMLFESKA----------NWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
A +EE LF KA +V NSL+ + K LG +F +
Sbjct: 144 KA---ASELEE---LFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI 197
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEAR 298
P RD VSWN+MIT + Q EA LF+E ++V T ++S + + R
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR 257
Query: 299 MIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
+ + E+N + NAM+ Y + ++ A+ LF+ M K++ SW TM+ GYA+
Sbjct: 258 WVHSYI-ERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSV 412
GE A+ +FD MP D +W A+I+ Y Q G +++L LF E++ + + S
Sbjct: 317 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVST 376
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
LS CA L +++LG +H + K G + C + +L+ MYCKCG +++A F + KDV
Sbjct: 377 LSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDV 436
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
W+ MIAG A HG GKDA+ LF M+ +KP+ +T IL ACSH GLVE+G +F
Sbjct: 437 FVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ 496
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M YGV+P KHY CMVD+LGRAG L+EA L++ MP P A+ WGALLGAC ++
Sbjct: 497 MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVV 556
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
LAE+A + E+EP N G YVLLSN+YA +G+W VS +R MRD G+KK G S +EV
Sbjct: 557 LAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD 616
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE-KEHMLRYHS 711
VH F VGD HP +IYA L+E+ +L+ G+V + +L V EE+ KE L HS
Sbjct: 617 GIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHS 676
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EKLA+A+G++S +PIR++KNLRVC DCH+ K +SK+ R I+LRD RFHHF G
Sbjct: 677 EKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGH 736
Query: 772 CSCGDYW 778
CSC DYW
Sbjct: 737 CSCMDYW 743
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 231/524 (44%), Gaps = 61/524 (11%)
Query: 4 NNRLRQLHSSCI---LHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
+L+Q+H+ + L S +RL + A +P+PS ++ + P P +
Sbjct: 48 TKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFD----QIPHP----N 99
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR-------- 112
+ WN I + + +L +F M +S + +L+ +
Sbjct: 100 LYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFH 159
Query: 113 -QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
V + D+ N +I Y + L +F +P+RDVVSWN+M++ + Q G +
Sbjct: 160 GMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPE 219
Query: 172 AARRIFDRM----LEKNEISWNGLLAA---------------YVQNGRIEEACMLFESKA 212
A +F M ++ N I+ G+L+A Y++ RI E+ L
Sbjct: 220 EALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTL----- 274
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
N+++ + K + DAK +FD+MP +D VSW TM+ GYA+ AQ +F+
Sbjct: 275 ------SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDA 328
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VSWNAMIAGYVQTKRMDM 327
P +D+ W A++S Y Q GK EA +F + T V+ + ++ Q MD+
Sbjct: 329 MPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDL 388
Query: 328 ARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
+ + + N ++I Y + G++ A +F + + D W+A+IAG A
Sbjct: 389 GGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAM 448
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCF 442
G+ +D++ LF +M+ + N FT++L C+++ +E G+ Q+ V G G
Sbjct: 449 HGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVK 508
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS-WNTMIAGYARH 485
++ + + G +EEA E++ S W ++ H
Sbjct: 509 HYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 552
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/680 (39%), Positives = 405/680 (59%), Gaps = 50/680 (7%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+R + + V+ Y N +L+ N + + K +V SWN++++ A++G + A R F
Sbjct: 85 RRSICAGAVLRRRYSNNPNLTTLFNKY--VDKTNVFSWNSVIAELARSGDSVEALRAFSS 142
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M + + ++ R C + A ++ S G Q+ L IF
Sbjct: 143 MRKLS-----------LKPNRSTFPCAIKSCSALLDLHS-----GRQAHQQAL-----IF 181
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
P D + ++ Y++ L +A+ LF+E +++ +WT+M++GYVQN A +
Sbjct: 182 GFEP--DLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALL 239
Query: 300 IFDAMPEKNT---------VSWNAMIAGYVQTKRMD-----------MARELFEAMTCKN 339
+F + + V AM++ R+ + + FE +
Sbjct: 240 LFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEG----D 295
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+ NT++ YA+ GE+ +R +FD M + D ISW +IIA YAQ+G S +S+ +F M +
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 355
Query: 400 YGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
GE N ++VL CA+ S LGK +H Q++K+G E+ FVG +++ MYCKCG VE
Sbjct: 356 DGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVE 415
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A AF+ + +K+V SW+ M+AGY HG K+AL +F M G+KP+ IT V +L+ACS
Sbjct: 416 MARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS 475
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H GL+E+G +F +M+ ++ V P +HY CMVDLLGRAG L EA +L+K M PD W
Sbjct: 476 HAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVW 535
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
GALLGACR++ +L E +A +FE++P+N G YVLLSN+YA +GRW DV ++R+ M++
Sbjct: 536 GALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNS 595
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
G+ K G+S ++++ +VH F VGD HP+ ++IY YLE+L KL++ G+V VLHDV
Sbjct: 596 GLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDV 655
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
G EEKE +LR HSEKLAVA+GI++ G I ++KNLRVC DCH AIK ISKIV R I++
Sbjct: 656 GHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVV 715
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD+ RFHHF G CSCGDYW
Sbjct: 716 RDSKRFHHFRDGLCSCGDYW 735
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 202/517 (39%), Gaps = 145/517 (28%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVS------------------- 94
++ WN I R+G AL F+SM P RS+
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 95 --------------YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
+A++ Y G+L AR +FD++ R++VSW MI+GYV+N
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235
Query: 141 AARNLFE-------------------------------------------MMPKR----D 153
A LF+ + KR D
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----- 208
+ NT++ YA+ G +RR+FD M E++ ISWN ++A Y QNG E+ +F
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 355
Query: 209 ESKANWEVVSWNSLMGGFVK--QKRLGDAKWIFD---RMPVRDEVSWNT-MITGYAQNNY 262
+ + N+ V+ ++++ +RLG K I D +M + V T +I Y +
Sbjct: 356 DGEINYNAVTLSAVLLACAHSGSQRLG--KCIHDQVIKMGLESNVFVGTSIIDMYCKCGK 413
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAG 318
+ A++ F+ K+V +W+AMV+GY +G EA +F M + N +++ +++A
Sbjct: 414 VEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAA 473
Query: 319 YVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCI 372
++ F+AM+ + V + M+ ++G + A +L M + D +
Sbjct: 474 CSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFV 533
Query: 373 SWAAIIAG----------------------------------YAQSGYSEDSLRLFIEMK 398
W A++ YA +G ED R+ I MK
Sbjct: 534 VWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMK 593
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
G L + P S++ + +G + H Q K+
Sbjct: 594 NSG--LVKPPGFSLVDIKGRVHVFLVGDREHPQHEKI 628
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/664 (40%), Positives = 392/664 (59%), Gaps = 26/664 (3%)
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
+++ K L + L PK D N +L YA+ G A+ +FD M +++ SWN LL
Sbjct: 38 FIQAKRLQSHMELNLFQPK-DSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLL 96
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+AY + G +E ++F+ + VS+N+L+ F G A + RM E +
Sbjct: 97 SAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRM---QEDGFQP 153
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDV-------------FTWTAMVSGYVQNGKVDEARM 299
T Y+ N L +L + K + F AM Y + G +D+AR+
Sbjct: 154 --TQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARL 211
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGE 355
+FD M +KN VSWN MI+GYV+ + LF M ++ + + ++ Y + G
Sbjct: 212 LFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGR 271
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ ARNLF ++P+ D I W +I GYAQ+G ED+ LF +M R + + +S++S+
Sbjct: 272 VDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSS 331
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA LASL G+ +HG++V +G + V +AL+ MYCKCG +A FE + ++VI+W
Sbjct: 332 CAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITW 391
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N MI GYA++G +AL L+E M+ KPD+IT VG+LSAC + +V++G +YF S++
Sbjct: 392 NAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSIS- 450
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
++G+ P HY CM+ LLGR+G +D+A +L++ MP EP+ W LL C G + AE
Sbjct: 451 EHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCA-KGDLKNAE 509
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AA +FE++P NAG Y++LSNLYAA GRW DV+ VR M+++ KK YSW+EV NKV
Sbjct: 510 LAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKV 569
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F D HPE +IY L L L+Q G+ T +VLH+VGEEEK + YHSEKLA
Sbjct: 570 HRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLA 629
Query: 716 VAYGILSIPAG-RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
+A+ ++ P G PIR++KN+RVC+DCH +K S + R II+RD+NRFHHF GG CSC
Sbjct: 630 LAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSC 689
Query: 775 GDYW 778
D W
Sbjct: 690 NDNW 693
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 217/488 (44%), Gaps = 101/488 (20%)
Query: 30 ANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR 89
A N + K L+ H+ + +PK D N + + + G A +VF++M +
Sbjct: 33 ARANDFIQAKRLQSHM-ELNLFQPK-----DSFIHNQLLHLYAKFGKLSDAQNVFDNMTK 86
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN------------- 136
R S+N ++S Y G ++ VFDQMP RD VS+N +I+ + N
Sbjct: 87 RDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRM 146
Query: 137 -------------KSLSAARNLFEM-----MPKRDVVS--------WNTMLSGYAQNGYA 170
+L A L ++ + R VV+ N M YA+ G
Sbjct: 147 QEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDI 206
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGF 226
D AR +FD M++KN +SWN +++ YV+ G E LF S ++V+ ++++ +
Sbjct: 207 DKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAY 266
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWT 282
+ R+ DA+ +F ++P +DE+ W TMI GYAQN +A LF + ++V +T +
Sbjct: 267 FRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTIS 326
Query: 283 AMVS----------GYVQNGKVD-------------------------EARMIFDAMPEK 307
+MVS G V +GKV +AR+IF+ MP +
Sbjct: 327 SMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR 386
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY----AQSGEITHARNLF 363
N ++WNAMI GY Q ++ A L+E M +N N G + + + F
Sbjct: 387 NVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYF 446
Query: 364 DRMPQHDCIS----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA-- 417
D + +H +A +I +SG + ++ L M N ++++LS CA
Sbjct: 447 DSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMP---HEPNYRIWSTLLSVCAKG 503
Query: 418 NLASLELG 425
+L + EL
Sbjct: 504 DLKNAELA 511
>gi|147859671|emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
Length = 833
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/646 (37%), Positives = 380/646 (58%), Gaps = 20/646 (3%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
+++ N I+ MRNG + A +F+ MP+R++V+YNAMI GY NG +FD+MP
Sbjct: 194 NLKPLNSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMP 253
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+RD+ S+N MI+G ++ ++ A +F+ MP RDVVSWN+M+SGY NG A R+F
Sbjct: 254 ERDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSG 313
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M+ K+ +SWN ++A V G+++ A F+ ++ SW +++ G R+ +A+ +F
Sbjct: 314 MVLKDVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLF 373
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+ MPVRD +WNTMI GY +N + + LF++ P +D +W M++G V+N ++ A
Sbjct: 374 EDMPVRDVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQNAMR 433
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+F MP+K SWN+++ G ++ + A E + SW +I GY ++GE+ A
Sbjct: 434 LFVEMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTA 493
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
++F+ MP D +W II G ++ + E+ L+ F++MK G + + FTSVL+ C++L
Sbjct: 494 VSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDL 553
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+L LG+Q+H Q+ K GF V NA++ +Y +CG+ A F + DVISWN++I
Sbjct: 554 PTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSSMTSHDVISWNSII 613
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
G A +G G +A+ +FE M++ IKP+ IT VG+LSACSH GLV++G YF M +
Sbjct: 614 CGLAHNGNGVEAIEMFEKMRSTDIKPNRITFVGVLSACSHAGLVDQGKYYFDFMKYKCCL 673
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLGACRLYGKTELAEK 596
P +HYTC+VDLLGR G +DEA + ++ M E A+ WGA+LGACR++ ++ E
Sbjct: 674 EPTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNIQVGEI 733
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
A E I E+EP N G+ D +V ++MR++GVKK SW+EV H
Sbjct: 734 AGERILEIEPHN------------FCGKREDAERVWVRMREKGVKKQPACSWMEVNGSGH 781
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFK-----LKQDGFVYSTKLVLHD 697
F GD+ HP+ R+ L L + LK + + VL+D
Sbjct: 782 VFLSGDSSHPQFSRVCGVLGLLHMEMEIGILKSNAASFQEMQVLND 827
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 184/391 (47%), Gaps = 19/391 (4%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K G DI W I+ G A +F MP R ++N MI+GYL NG ++
Sbjct: 343 KEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPVRDVRAWNTMIAGYLENGCIEIGEV 402
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+F +MPQRD SWN MI+G VRN+ + A LF MP++ SWN+++ G +NG A
Sbjct: 403 LFQKMPQRDFRSWNEMINGLVRNQRIQNAMRLFVEMPQKCRRSWNSIVFGLIRNGLIKEA 462
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
++ + +SW L+ Y + G ++ A +FE + +WN ++ G +
Sbjct: 463 HAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGE 522
Query: 234 DAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW-----TAM 284
+ F +M P DE ++ +++T + L +++ + K F + AM
Sbjct: 523 EGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQV-TKTGFNYFVAVSNAM 581
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA--- 341
V+ Y + G + A ++F +M + +SWN++I G A E+FE M ++
Sbjct: 582 VTLYARCGNSNSALLLFSSMTSHDVISWNSIICGLAHNGNGVEAIEMFEKMRSTDIKPNR 641
Query: 342 -SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFI 395
++ +++ + +G + + FD M C+ + I+ + G ++++
Sbjct: 642 ITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFLR 701
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+M+ G + S + +VL C ++++G+
Sbjct: 702 QMEANGVEVPASVWGAVLGACRIHKNIQVGE 732
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 286/750 (38%), Positives = 417/750 (55%), Gaps = 58/750 (7%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL-----NGQL 108
+P D ++ + + RN D A+ F M R V YLL N L
Sbjct: 133 QPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRM-RYDGVRPVVYNFTYLLKVCGDNADL 191
Query: 109 DPARQVFDQMPQRDLVSWNVMISG----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
+++ Q+ S ++G Y + + + A +F+ MP+RD+V WNT++SGY
Sbjct: 192 RKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGY 251
Query: 165 AQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNG--RIEEACMLFESKANWE--V 216
AQNG+ A + RM E+ + I+ +L A G RI + + +A +E V
Sbjct: 252 AQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFV 311
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
+L+ + K +G A+ IFDRM + VSWN+MI GY QN A +F++ +
Sbjct: 312 NVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDE 371
Query: 277 DVFTWTAMVSGYVQN----GKVDEARMI---FDAMPEKNTVS-WNAMIAGYVQTKRMDMA 328
V V G + G V++ R + D + + VS N++I+ Y + KR+D+A
Sbjct: 372 QVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIA 431
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
E+FE + K + SWN MI GYAQ+G I A + F +M +
Sbjct: 432 AEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNI---------------KP 476
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
DS + SV+ A L+ L K +HG +++ + FV AL+
Sbjct: 477 DSFTM----------------VSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALV 520
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG+V A F+ + ++ V +WN MI GY HG GK AL LFE MK IKP+++
Sbjct: 521 DMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEV 580
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + +LSACSH+GLVE+G +YF SM +DYG+ P HY MVDLLGRA RL+EA + ++
Sbjct: 581 TFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQK 640
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MP EP + +GA+LGACR++ EL EKAA IF+++P++ G +VLL+N+YA + W V
Sbjct: 641 MPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKV 700
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++VR M +G++K G+S +E+QN+VHTF G T HP+ +IYA+LE L ++K G++
Sbjct: 701 ARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYM 760
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T V HDV + KE +L HSEKLA+A+ +L+ G I + KNLRVC DCHNA K+I
Sbjct: 761 PDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYI 819
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S + R II+RD RFHHF G+CSCGDYW
Sbjct: 820 SLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 8/202 (3%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+ P +L C ++ L Q ++K G + L+ ++CK GS+ EA F+
Sbjct: 77 KHPSAILLELCTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQ 133
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
I DK ++TM+ GYAR+ DA+ F M+ G++P +L C + K
Sbjct: 134 PIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRK 193
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E + + G N T +V++ + ++EA + MP E D W ++
Sbjct: 194 GKEIHCQLIVN-GFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMP-ERDLVCWNTIISG- 250
Query: 586 RLYGKTELAEKAAEVIFEMEPE 607
Y + + A E++ M+ E
Sbjct: 251 --YAQNGFGKTALELVLRMQEE 270
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/589 (41%), Positives = 365/589 (61%), Gaps = 1/589 (0%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP-RRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
D W V ++ + R G + A V + MP + + YNAMISGY NG+ D A ++ +M
Sbjct: 110 DDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREM 169
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P DL SWN ++G ++ + A F+ M ++D+VSWN ML G+ + G DAA F
Sbjct: 170 PAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFG 229
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
R+ N +SW LL Y + GRI +A LF+ VV+ N ++ G+V+ RL +A +
Sbjct: 230 RIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKL 289
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
FD MP ++ +SW T+I+G A+ L EA+ L ++ V TA++ GY+Q V++AR
Sbjct: 290 FDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDAR 349
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
IFD M +TV WN MI+GYVQ ++ A LF+ M K+ SWNTMI GYAQ G++
Sbjct: 350 QIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRK 409
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A +F RM + + +SW ++I+G+ Q+G D+ F+ M+R R + S + S L CAN
Sbjct: 410 AIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACAN 469
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
LA+L +G+QLH LV+ G F NAL+ Y KCG + EA F+E+V KD++SWN +
Sbjct: 470 LAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNAL 529
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ GYA +G G +A+ +F M+ G++PD++T VGILSACS GL+++G +F SM +Y
Sbjct: 530 VDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYS 589
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P ++HY CM DLLGRAG+L+EA L++ M +P+A WGALLGAC++Y ELA AA
Sbjct: 590 LKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAA 649
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
E + E+EP A YVLLSN+ A +G+W + K R ++++G K G +
Sbjct: 650 EKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPPGLA 698
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 182/358 (50%), Gaps = 26/358 (7%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N +T A++ LA A+RLF+ P ++ T+ +M+S ++G++DEAR +FD MP +N V
Sbjct: 22 NQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAV 81
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
SWNAMIA R+ AR LF+ M ++ SW M++ YA++GE+ AR++ DRMP
Sbjct: 82 SWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPGDK 141
Query: 371 CIS-WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL- 428
C + + A+I+GYA++G +D+++L EM P + S + LA L Q+
Sbjct: 142 CTACYNAMISGYAKNGRFDDAVKLLREM----------PAPDLFSWNSALAGLTQSGQMV 191
Query: 429 -HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
Q E N +L + + G ++ A F I +V+SW T++ GY R G
Sbjct: 192 RAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGR 251
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
DA LF+ M + ++ + G + +E+ + F M NS +T
Sbjct: 252 ISDARDLFDRMPERNVVACNVMLDGYV----RLSRLEEACKLFDEMPG-----KNSISWT 302
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
++ L RAG+L EA++L+ M F AA + G Y + + A ++ ME
Sbjct: 303 TIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHG----YLQRNMVNDARQIFDGME 356
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 157/320 (49%), Gaps = 21/320 (6%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
VF ++ ++G++ AR +FD+MP +NTV++N+M++ + R+D AR LF+ M
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N SWN MI + G + AR LFDRMP D SW +++ YA++G E + + M
Sbjct: 78 RNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRM 137
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
G++ + + +++S A + +L ++ F N+ L + G +
Sbjct: 138 P--GDKCT-ACYNAMISGYAKNGRFDDAVKLLREMPAPDL----FSWNSALAGLTQSGQM 190
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A F+E+V+KD++SWN M+ G+ R G A F +++ P+ ++ V +L+
Sbjct: 191 VRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIES----PNVVSWVTLLNGY 246
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG--RAGRLDEAQNLMKNMPFEPDA 575
G + + F M P C V L G R RL+EA L MP + ++
Sbjct: 247 CRAGRISDARDLFDRM-------PERNVVACNVMLDGYVRLSRLEEACKLFDEMPGK-NS 298
Query: 576 ATWGALLGACRLYGKTELAE 595
+W ++ GK + A+
Sbjct: 299 ISWTTIISGLARAGKLQEAK 318
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 390/639 (61%), Gaps = 18/639 (2%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP-RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
W + ++ ++R G A + + MP + + YN MISGY NG+ + A + +MP D
Sbjct: 107 WTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPD 166
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
+VSWN ++ G +RN+ +S + F+ MP +D+VSWN ML GY + G D A F R+
Sbjct: 167 IVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPS 226
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
N ISW L+ Y Q GR+ EA LF+ VV+WN L+ G+V+ ++ A +F M
Sbjct: 227 PNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEM 286
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
P ++ +SW TM++G+ ++ L EA+ + + P +V TA++ GY+++ +D+AR +FD
Sbjct: 287 PEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFD 346
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
+ ++ V WN MI+GYVQ +D A LF+ M K++ SWNTMI G AQ G+I A ++
Sbjct: 347 GIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASI 406
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F +M + + +SW +II+G+ Q+G ++L+ F+ M+R + + + LS ANLA+L
Sbjct: 407 FRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATL 466
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
++G+Q H LV+ GF + GNAL+ Y KCG + EA F+E+V +D++SWN +I GY
Sbjct: 467 QIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGY 526
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A +G G + + +F M+ ++PD+IT+V +LSACSH GL+++G +F SM + Y + P
Sbjct: 527 ASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPV 586
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
++HYTCMVDLLGRAGRL EA L++ M +P+A WGALLGACR++ E+A AAE +F
Sbjct: 587 AEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLF 646
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS--- 659
E+EP A YVLLSN+ +G+W D KVR+ M++ ++ + + NK+ S
Sbjct: 647 ELEPCKASNYVLLSNICVEAGKWDDADKVRVLMKESILRSCN----IHISNKMLDNSGYR 702
Query: 660 -VGDTLHP--------EKDRIYAYLE-ELEFKLKQDGFV 688
G + P E+ A LE LEF K+D V
Sbjct: 703 CYGASWKPRHCLWKWQEQKDFKALLELSLEFGSKKDDAV 741
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 307/582 (52%), Gaps = 53/582 (9%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N +T+ R+G +A +F MPRR+ VSYNAM+S +G+L AR++FD+MP+R+ V
Sbjct: 15 NQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPV 74
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML-EK 183
SWN M+ ++ + AR LF+ MP R+ SW M+S Y + G AR + DRM EK
Sbjct: 75 SWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEK 134
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+N +++ Y +NGR E+A L + ++VSWNS++GG ++ + + + FD MP
Sbjct: 135 CAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMP 194
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+D VSWN M+ GY + L A F P +V +W +V+GY Q G++ EAR +FD
Sbjct: 195 DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDR 254
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
MPE+N V+WN +++GYVQ +++ A LF M KN SW TM++G+ +SG++ A+++
Sbjct: 255 MPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVL 314
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
+MP + + A++ GY +S +D+ +LF
Sbjct: 315 SKMPSDNVGAKTALMHGYLKSNLIDDARQLF----------------------------- 345
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G +V+ +A C+ N ++ Y +CG ++EA F+++ +KD+ISWNTMIAG A
Sbjct: 346 -----DGIVVR---DAVCW--NTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCA 395
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+ G + A +F MK + + ++ I+S GL + ++F M RD
Sbjct: 396 QGGQIRKAASIFRKMK----RRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWC 451
Query: 544 KHYTCMVDLLGRA----GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ C+ A GR + +L+ F D++ AL+ A Y K +A +
Sbjct: 452 TYACCLSASANLATLQIGR--QFHSLLVRTGFISDSSPGNALISA---YAKCGRMLEARQ 506
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
V EM ++ + L + YA++G +V V +M V+
Sbjct: 507 VFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVR 548
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 224/422 (53%), Gaps = 43/422 (10%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P P DI WN + +RN ++ F+ MP + VS+N M+ GY+ G LD A
Sbjct: 163 PAP----DIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVAS 218
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
F ++P +++SW +++GY + + AR LF+ MP+R+VV+WN +LSGY Q +A
Sbjct: 219 AFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEA 278
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
A +F M EKN ISW +++ +V++G+++EA + + V + +LM G++K +
Sbjct: 279 AYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLI 338
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
DA+ +FD + VRD V WNTMI+GY Q L EA LF++ P KD+ +W M++G Q G
Sbjct: 339 DDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGG 398
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--------MDMARELFEAMTCK------ 338
++ +A IF M +NTVSWN++I+G+VQ M M R+ A C
Sbjct: 399 QIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLS 458
Query: 339 ---NVASW----------------------NTMITGYAQSGEITHARNLFDRMPQHDCIS 373
N+A+ N +I+ YA+ G + AR +FD M D +S
Sbjct: 459 ASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVS 518
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I GYA +G + + +F EM+ R + VLS C++ ++ G ++
Sbjct: 519 WNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMI 578
Query: 434 KV 435
K+
Sbjct: 579 KL 580
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 51/368 (13%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
VF ++ ++G++ AR +F+ MP +N VS+NAM++ R+ AR LF+ M
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N SWNTM+ +Q G + AR LFD MP + SW +++ Y ++G E+
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAG----------EL 120
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
E L+R P G++ A C+ N ++ Y K G
Sbjct: 121 TLARELLDRMP----------------GEKC----------AACY--NTMISGYAKNGRF 152
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E+A +E+ D++SWN+++ G R+ ++ F+ M + ++ + G + A
Sbjct: 153 EDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRA- 211
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
G ++ + +F + PN + +V+ +AGR+ EA+ L MP E +
Sbjct: 212 ---GDLDVASAFFSRIPS-----PNVISWVNLVNGYCQAGRMGEARELFDRMP-ERNVVA 262
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
W LL Y + E A + EM +N+ + + + + SG+ + V KM
Sbjct: 263 WNVLLSG---YVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPS 319
Query: 638 RGVKKVTG 645
V T
Sbjct: 320 DNVGAKTA 327
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/663 (39%), Positives = 388/663 (58%), Gaps = 22/663 (3%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
+L AR +F+ +P+ ++ SWN ++ A + + +F RML + N +
Sbjct: 188 ALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLI 247
Query: 198 NGRIEEACML---------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV--RD 246
E C L ++ +V NSL+ + L A +F+ + +D
Sbjct: 248 KAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKD 307
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
VSWN+M+TG+ Q Y +A LFE E + T +++S + + R + D
Sbjct: 308 IVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCD 367
Query: 303 AMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
+ N NA I +V+ +++AR LF+ M ++V SW T+I GYA+ E
Sbjct: 368 YIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGI 427
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF--IEMKRYGERLNRSPFTSVLSTC 416
AR++FD MP+ D +W +I+GY QSG +++L +F +++ + G R ++ S LS C
Sbjct: 428 ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A L ++++G+ +HG + K + + +L+ MY K G VE+A F I +KDV W+
Sbjct: 488 AQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWS 547
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
MIAG A HG G+ A+ LF M+ +KP+ +T +L ACSH+GLV++G F M R
Sbjct: 548 AMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERV 607
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
YGV+P +KHY+CMVD+LGRAG L+EA ++ MP P A+ WGALLGAC ++G ELAEK
Sbjct: 608 YGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEK 667
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
A + E+EP N G YVLLSNLYA +G W VS++R +MRD G+KK TG S +E+ VH
Sbjct: 668 ACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVH 727
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE-KEHMLRYHSEKLA 715
F VGD HP IYA L+E+ +L+ G+V +T +L V EEE KE L+ HSEK+A
Sbjct: 728 EFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMA 787
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+A+G++ + + IR++KNLRVC DCH K +SK+ GR I+LRD RFHHFSGG CSC
Sbjct: 788 IAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQ 847
Query: 776 DYW 778
DYW
Sbjct: 848 DYW 850
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 195/410 (47%), Gaps = 47/410 (11%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMP--QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
N++I Y G LD A VF+ + +D+VSWN M++G+V+ A +LFE M
Sbjct: 279 NSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEG 338
Query: 154 V----VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW-----NGLLAAYVQNGRIEEA 204
V V+ +++S A+ R++ D +++NE+ N + +V+ G +E A
Sbjct: 339 VHPNAVTMVSVMSACAKTMNLTLGRKVCD-YIDRNEMMMNLNVCNATIDMFVKCGEVEIA 397
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
LF++ +VVSW +++ G+ K G A+ IFD MP +D +WN +I+GY Q+
Sbjct: 398 RGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPK 457
Query: 265 EAQRLFEEAPVK------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
EA +F E + D T + +S Q G +D W I G
Sbjct: 458 EALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE-------------W---IHG 501
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y++ +R+ + R L ++I Y++SG++ A +F + D W+A+I
Sbjct: 502 YIKKERIQLNRNLA-----------TSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMI 550
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GF 437
AG A G E ++ LF++M+ + N FT++L C++ ++ GK+L ++ +V G
Sbjct: 551 AGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGV 610
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+ ++ + + G +EEA E + + W ++ HG
Sbjct: 611 VPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHG 660
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 165/334 (49%), Gaps = 18/334 (5%)
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM---KRYGERLN 405
++ + +AR +FD++PQ + SW +I A S S+ +FI M +G N
Sbjct: 182 AFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGP--N 239
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+ F ++ A +GK +HG +K F FV N+L+ Y CG ++ AY FE
Sbjct: 240 KFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFE 299
Query: 466 EIV--DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
I +KD++SWN+M+ G+ + G+ AL LFE M+ G+ P+ +TMV ++SAC+ T +
Sbjct: 300 MIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNL 359
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
G + ++R+ ++ N +D+ + G ++ A+ L NM + D +W ++
Sbjct: 360 TLGRKVCDYIDRNE-MMMNLNVCNATIDMFVKCGEVEIARGLFDNME-KRDVVSWTTIID 417
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV--RLKMRDRGVK 641
Y K A ++ M ++ + +L + Y SGR + + L++ G +
Sbjct: 418 G---YAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGAR 474
Query: 642 --KVTGYSWLEVQNKVHTFSVGDTLHP--EKDRI 671
+VT S L ++ +G+ +H +K+RI
Sbjct: 475 PDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERI 508
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 144/309 (46%), Gaps = 43/309 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA I ++ G+++ AR +FD M +RD+VSW +I GY + AR++F+ MP++D+
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM------LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
+WN ++SGY Q+G A IF + ++++ L+A Q G +
Sbjct: 442 AWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAM-------- 493
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
++ W + G++K++R+ + + ++I Y+++ + +A +
Sbjct: 494 -----DIGEW---IHGYIKKERIQLNRNLA-----------TSLIDMYSKSGDVEKAIEV 534
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRM 325
F KDVF W+AM++G +G+ + A +F M E N+V++ ++ + +
Sbjct: 535 FHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLV 594
Query: 326 DMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIA 379
D + LF+ M ++ M+ ++G + A + MP S W A++
Sbjct: 595 DEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLG 654
Query: 380 GYAQSGYSE 388
G E
Sbjct: 655 ACCIHGNLE 663
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 22/287 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I ++ G + A +F++M +R VS+ +I GY + AR +FD MP++D+
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441
Query: 125 SWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGYADAARRIFD 178
+WNV+ISGY ++ A +F + + D V+ + LS AQ G D I
Sbjct: 442 AWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHG 501
Query: 179 RMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
++K I N L+ Y ++G +E+A +F S N +V W++++ G R
Sbjct: 502 -YIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560
Query: 234 DAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEE-----APVKDVFTWTAM 284
A +F M + V++ ++ + + + E +RLF+E V ++ M
Sbjct: 561 AAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCM 620
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDMARE 330
V + G ++EA + MP + S W A++ +++A +
Sbjct: 621 VDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEK 667
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 291/827 (35%), Positives = 428/827 (51%), Gaps = 162/827 (19%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR------------------ 152
AR+VFD+ P VSW+ +++ Y N A F M R
Sbjct: 56 ARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPD 115
Query: 153 ------------------DVVSWNTMLSGYAQNGYADAARRIFDRML-EKNEISWNGLLA 193
D+ N +++ Y G+ D ARR+FD ++N +SWNG+++
Sbjct: 116 AGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175
Query: 194 AYVQNGRIEEACMLF---------------------------------------ESKANW 214
A+V+N R +A LF + +
Sbjct: 176 AFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDK 235
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---- 270
+V + N+L+ + K + A +F ++P D VSWN I+G + + A L
Sbjct: 236 DVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMK 295
Query: 271 EEAPVKDVFTWT-------------------------------------AMVSGYVQNGK 293
V +VFT + A+V Y + G
Sbjct: 296 SSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGL 355
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAG---------------YVQTKRMDMARELFEAMTCK 338
+D+AR +F+ +P K+ + WNA+I+G ++ + D+ R A+ K
Sbjct: 356 LDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVL-K 414
Query: 339 NVASW-------------------------NTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+ AS N +I Y + + +A +F+ + I+
Sbjct: 415 STASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIA 474
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF--TSVLSTCANLASLELGKQLHGQ 431
+ ++I +Q + ED+++LF+EM R G L PF +S+L+ CA+L++ E GKQ+H
Sbjct: 475 FTSMITALSQCDHGEDAIKLFMEMLRKG--LEPDPFVLSSLLNACASLSAYEQGKQVHAH 532
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
L+K F F GNAL+ Y KCGS+E+A AF + DK V+SW+ MI G A+HG GK A
Sbjct: 533 LIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRA 592
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L +F M I P+ IT+ +L AC+H GLV++ YF SM +G+ +HY+CM+D
Sbjct: 593 LDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMID 652
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG+LD+A L+ +MPFE +AA WGALL A R++ EL + AAE +F +EPE +G
Sbjct: 653 LLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGT 712
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
+VLL+N YA++G W +V+KVR M+D VKK SW+E++++VHTF VGD HP I
Sbjct: 713 HVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDI 772
Query: 672 YAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
YA LEEL + + G+V + ++ LHDV + EKE +L +HSE+LAVA+ ++S PAG PIRV
Sbjct: 773 YAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRV 832
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLR+C DCH A K ISKIV R II+RD NRFHHFS G+CSCGDYW
Sbjct: 833 KKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 136/280 (48%), Gaps = 14/280 (5%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N +++ Y++ AR +FD P +SW++++ Y+ + ++L F M+ G R
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVR 100
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N VL CA A LG Q+H V G FV NAL+ MY G V+EA
Sbjct: 101 CNEFALPIVLK-CAPDAG--LGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRV 157
Query: 464 FEEIV-DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+E D++ +SWN M++ + ++ DA+ LF M G++P++ +++AC+ +
Sbjct: 158 FDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRD 217
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+E G + ++M G + +VD+ + G + A + +P + D +W A +
Sbjct: 218 LEAGRK-VHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFI 275
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
C L+G + A E++ +M+ L+ N++ S
Sbjct: 276 SGCVLHGHD---QHALELLLQMKSSG-----LVPNVFTLS 307
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 170/438 (38%), Gaps = 99/438 (22%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + G A VF +P+ VS+NA ISG +L+G A ++ Q
Sbjct: 234 DKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 118 MPQRDLVSWNV------------------------------------------MISGYVR 135
M LV NV ++ Y +
Sbjct: 294 MKSSGLVP-NVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAK 352
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML-EKNEISWNGLLAA 194
L AR +FE +P++D++ WN ++SG + G + +F RM E ++I+ L A
Sbjct: 353 YGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAV 412
Query: 195 YVQNGRIEEACMLFESKANWEVVSW-------NSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+E + A E + + N L+ + K L A +F+ +
Sbjct: 413 LKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNI 472
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVK------------------------------- 276
+++ +MIT +Q ++ +A +LF E K
Sbjct: 473 IAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 532
Query: 277 --------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ----TKR 324
DVF A+V Y + G +++A + F +P+K VSW+AMI G Q +
Sbjct: 533 LIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRA 592
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIA 379
+D+ R + + N + +++ +G + A+ F M + I ++ +I
Sbjct: 593 LDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMID 652
Query: 380 GYAQSGYSEDSLRLFIEM 397
++G +D++ L M
Sbjct: 653 LLGRAGKLDDAMELVNSM 670
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 406 RSP--FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
RSP + +L+ A SL LG +H L+K G N LL Y KC A
Sbjct: 2 RSPESISPLLTRYAATQSLFLGAHIHAHLLKSGLLHA--FRNHLLSFYSKCRLPGSARRV 59
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+E D +SW++++ Y+ + ++AL F +M+ G++ ++ + +L GL
Sbjct: 60 FDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL- 118
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
G + +++ G+ + +V + G G +DEA+ + + +A +W ++
Sbjct: 119 --GVQ-VHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175
Query: 584 ACRLYGKTELAEKAAEVIFEM 604
A + K + A E+ EM
Sbjct: 176 A---FVKNDRCSDAVELFGEM 193
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/634 (41%), Positives = 385/634 (60%), Gaps = 50/634 (7%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
N ++ Y + G I A +F+ ++E V WN+++ G+ K + G A+W+FD MP R+
Sbjct: 134 NAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERN 193
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP- 305
++W M+TGYA+ L A+R F+ P + V +W AM+SGY QNG +E +FD M
Sbjct: 194 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVN 253
Query: 306 ---EKNTVSWNAMIAG--------------------------YVQTKRMDM--------- 327
E + +W +I+ +V+T +DM
Sbjct: 254 AGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGA 313
Query: 328 ARELFEAMTC-KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
AR +F+ + +N +WN MI+ Y + G + AR LF+ MP + ++W ++IAGYAQ+G
Sbjct: 314 ARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQ 373
Query: 387 SEDSLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
S ++ LF EM ++L T SV+S C +L +LELG + L + +
Sbjct: 374 SAMAIELFKEMIT-AKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGH 432
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NA++ MY +CGS+E+A F+E+ +DV+S+NT+I+G+A HG G +A+ L +MK GI+
Sbjct: 433 NAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE 492
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD +T +G+L+ACSH GL+E+G + F S+ P HY CMVDLLGR G L++A+
Sbjct: 493 PDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKR 547
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
M+ MP EP A +G+LL A R++ + EL E AA +FE+EP+N+G ++LLSN+YA++GR
Sbjct: 548 TMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGR 607
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W DV ++R M+ GVKK TG+SW+E K+H F V D H D IY L EL K+++
Sbjct: 608 WKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMRE 667
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
G++ VL DV EEEKE ++ HSEKLA+ Y +L AG IRV+KNLRVC DCH A
Sbjct: 668 AGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTA 727
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IK ISK+ GR+II+RDNNRFH F+ G CSC DYW
Sbjct: 728 IKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 201/387 (51%), Gaps = 26/387 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
N I + R G A VF+ +P R +NAM+SGY A+ +FD MP+R+
Sbjct: 134 NAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERN 193
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-- 180
+++W M++GY + K L AAR F+ MP+R VVSWN MLSGYAQNG A+ R+FD M
Sbjct: 194 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVN 253
Query: 181 --LEKNEISWNGLLAAYVQNGRIEEACM-------LFESKANWEVVSWNSLMGGFVKQKR 231
+E +E +W +++A G + C+ L + + +L+ + K
Sbjct: 254 AGIEPDETTWVTVISACSSRG---DPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGS 310
Query: 232 LGDAKWIFDRM-PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
+G A+ IFD + R+ V+WN MI+ Y + L A+ LF P ++V TW +M++GY Q
Sbjct: 311 IGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQ 370
Query: 291 NGKVDEARMIFDAM-------PEKNTVSWNAMIAGYVQTKRMD--MARELFEAMTCKNVA 341
NG+ A +F M P++ T+ G++ + + R L E +++
Sbjct: 371 NGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSIS 430
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N MI Y++ G + A+ +F M D +S+ +I+G+A G+ +++ L MK G
Sbjct: 431 GHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGG 490
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQL 428
+R F VL+ C++ LE G+++
Sbjct: 491 IEPDRVTFIGVLTACSHAGLLEEGRKV 517
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 183/366 (50%), Gaps = 22/366 (6%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
P + + WN ++ + + A +F+ MP R+ +++ AM++GY L+ AR+
Sbjct: 157 PDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRY 216
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNG-- 168
FD MP+R +VSWN M+SGY +N LF+ M + D +W T++S + G
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276
Query: 169 --YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE-VVSWNSLMGG 225
A R + + ++ N LL Y + G I A +F+ + V+WN+++
Sbjct: 277 CLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISA 336
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFT 280
+ + L A+ +F+ MP R+ V+WN+MI GYAQN A A LF+E D T
Sbjct: 337 YTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 396
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPE---KNTVS-WNAMIAGYVQTKRMDMARELFEAMT 336
+++S G ++ + + E K ++S NAMI Y + M+ A+ +F+ M
Sbjct: 397 MVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 456
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLR 392
++V S+NT+I+G+A G A NL M + D +++ ++ + +G E+ +
Sbjct: 457 TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK 516
Query: 393 LFIEMK 398
+F +K
Sbjct: 517 VFESIK 522
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 20/276 (7%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+ + + +++ Y+ + +F M+ G R + + ++ + N
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNG-- 113
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD--KDVISWNTMI 479
G H ++K+G + FV NA++ MY + G + A F+EI D + V WN M+
Sbjct: 114 ---GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
+GY + A LF+ M + IT +++ + +E YF M V
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNV----ITWTAMVTGYAKVKDLEAARRYFDCMPERSVV 226
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNL---MKNMPFEPDAATWGALLGACRLYGKTELAEK 596
N+ M+ + G +E L M N EPD TW ++ AC G LA
Sbjct: 227 SWNA-----MLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAAS 281
Query: 597 AAEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKV 631
+ + + + N + L ++YA G G ++
Sbjct: 282 LVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRI 317
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 279/807 (34%), Positives = 433/807 (53%), Gaps = 126/807 (15%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR------NKSLSAARNLFEMMP 150
A+++ YL G++ R +F++MP RD+V WN+M+ Y+ LS+A + + P
Sbjct: 192 ALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHP 251
Query: 151 KR--------------------------------DVVSWNTMLSGYAQNGYADAARRIFD 178
+++S N +LSGY G A + F
Sbjct: 252 NEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFM 311
Query: 179 RM----LEKNEISWNGLLAAYVQNGRI----EEACMLFESKANWEVVSWNSLMGGFVKQK 230
M LE +++++ +LA V+ + + CM + + + NSL+ + K +
Sbjct: 312 DMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 371
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------AP---------- 274
++G A+ +F+ M RD +SWN++I G AQ++ EA LF + P
Sbjct: 372 KIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLK 431
Query: 275 ------------------------VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
V D F TA++ Y +N + EA ++F + V
Sbjct: 432 AASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLV 490
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWNT-------- 345
+WNAM++GY Q+ ELF M TC + + N
Sbjct: 491 AWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYA 550
Query: 346 --------------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
++ Y + G+++ A+ FD +P D ++W +I+G ++G E +L
Sbjct: 551 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERAL 610
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+F +M+ G + ++ + L +LE G+Q+H +K+ + FVG +L+ MY
Sbjct: 611 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMY 670
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCGS+++AY F+ I ++ +WN M+ G A+HG GK+AL LF+ M+++GIKPD +T +
Sbjct: 671 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFI 730
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+LSACSH+GLV + +Y SM+RDYG+ P +HY+C+ D LGRAG + EA+NL+ +M
Sbjct: 731 GVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSM 790
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
E A+ + LL ACR+ G TE ++ A + E+EP ++ YVLLSN+YAA+ +W ++
Sbjct: 791 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 850
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R M+ VKK G+SW+EV+NK+H F V D +P+ + IY ++++ +KQ+G+V T
Sbjct: 851 RTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPET 910
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
L DV EEEKE L YHSEKLAVA+G+LS P PIRV+KNLRVC DCHNA+K+ISK+
Sbjct: 911 DFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKV 970
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
R I+LRD NRFH F G CSCGDYW
Sbjct: 971 YDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 173/695 (24%), Positives = 303/695 (43%), Gaps = 121/695 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN--GQLDPARQVF--DQMPQ 120
N I+ + + G A VF+ MP R VS+N++++ Y + G ++ ++ F ++ +
Sbjct: 85 NNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILR 144
Query: 121 RDLVSWNVMI----------SGYV------------------------------RNKSLS 140
+D+V + M SGYV + +
Sbjct: 145 QDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVK 204
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
R LFE MP RDVV WN ML Y + G+ + A + L NEI+ LL+
Sbjct: 205 EGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLR-LLSRIS 263
Query: 197 QNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEV 248
+ FE + A E++S N ++ G++ + F M D+V
Sbjct: 264 GDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQV 323
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEA---PVKDVFTWT-AMVSGYVQNGKVDEARMIFDAM 304
++ ++ + + LA Q++ A + + T + ++++ Y + K+ AR +F+ M
Sbjct: 324 TFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNM 383
Query: 305 PEKNTVSWNAMIAG--------------------------YVQTKRMDMARELFE----- 333
E++ +SWN++IAG Y T + A L E
Sbjct: 384 SERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLS 443
Query: 334 ------AMTCKNVAS---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
A+ NVA +I Y+++ + A LF R D ++W A+++GY QS
Sbjct: 444 KQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQS 502
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
+L LF M + GER + +VL TC L ++ GKQ+H +K G++ +V
Sbjct: 503 HDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 562
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
+ +L MY KCG + A AF+ I D ++W T+I+G +G + AL +F M+ +G+
Sbjct: 563 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVL 622
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD+ T+ + A S +E+G + ++ + T +VD+ + G +D+A
Sbjct: 623 PDEFTIATLAKASSCLTALEQGRQ-IHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYC 681
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLSNLY 619
L K + + W A+L +G+ ++A ++ +ME P+ +LS
Sbjct: 682 LFKRIEMM-NITAWNAMLVGLAQHGE---GKEALQLFKQMESLGIKPDKVTFIGVLS--- 734
Query: 620 AASGRWGDVSK----VRLKMRDRGVK-KVTGYSWL 649
A G VS+ +R RD G+K ++ YS L
Sbjct: 735 -ACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCL 768
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 265/562 (47%), Gaps = 70/562 (12%)
Query: 96 NAMISGYLLNGQLDPARQV-FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+A+ + L+ G+ AR + ++ P+R LV N +IS Y + SL+ AR +F+ MP+RD+
Sbjct: 55 DAISTSDLMLGKCTHARILALEENPERFLV--NNLISMYSKCGSLTYARRVFDKMPERDL 112
Query: 155 VSWNTMLSGYAQN--GYADAARRIF--DRMLEKN-----EISWNGLLAAYVQNGRI--EE 203
VSWN++L+ YAQ+ G + + F R+L ++ ++ + +L + +G + E
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASE 172
Query: 204 ACMLFESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ + K + + +L+ ++K ++ + + +F+ MP RD V WN M+ Y +
Sbjct: 173 SFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMG 232
Query: 262 YLAEAQRL----------------------------------FEE----APVKDVFTWTA 283
+ EA L FE + V ++ +
Sbjct: 233 FKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNK 292
Query: 284 MVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK- 338
++SGY+ G+ F M E + V++ ++A V+ + + +++ M K
Sbjct: 293 ILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQV-HCMALKL 351
Query: 339 ----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+ N++I Y + +I AR +F+ M + D ISW ++IAG AQS +++ LF
Sbjct: 352 GLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLF 411
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLAS-LELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
+++ R G + + TSVL ++L L L KQ+H +K A FV AL+ Y +
Sbjct: 412 MQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSR 471
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
++EA F + D+++WN M++GY + G L LF M G + DD T+ +
Sbjct: 472 NRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATV 530
Query: 514 LSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
L C + +G + + Y++ Y + + + ++D+ + G + AQ ++P
Sbjct: 531 LKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAAQFAFDSIPV- 587
Query: 573 PDAATWGALLGACRLYGKTELA 594
PD W L+ C G+ E A
Sbjct: 588 PDDVAWTTLISGCIENGEEERA 609
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 206/453 (45%), Gaps = 63/453 (13%)
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
++ IS + L+ + RI + N E N+L+ + K L A+ +FD+M
Sbjct: 54 RDAISTSDLMLGKCTHARI------LALEENPERFLVNNLISMYSKCGSLTYARRVFDKM 107
Query: 243 PVRDEVSWNTMITGYAQNNY-----LAEAQRLFE-------------EAPV--------- 275
P RD VSWN+++ YAQ++ + EA LF +P+
Sbjct: 108 PERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 167
Query: 276 -----------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
D F A+V+ Y++ GKV E R++F+ MP ++ V WN M+
Sbjct: 168 VCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA 227
Query: 319 YVQTKRMDMARELFEAMTCKNV------ASWNTMITGY-AQSGEITHARNLFDRMPQHDC 371
Y++ + A +L A + + I+G +++G++ N D +
Sbjct: 228 YLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEI 287
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
IS I++GY +G L+ F++M ++ F VL+T L SL LG+Q+H
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCM 347
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+K+G + V N+L+ MYCK + A F + ++D+ISWN++IAG A+ +A
Sbjct: 348 ALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEA 407
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHT--GLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+ LF + G+KPD TM +L A S GL + +++ + + +S T +
Sbjct: 408 VCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNN--VADSFVSTAL 465
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+D R + EA+ L F D W A++
Sbjct: 466 IDAYSRNRCMKEAEVLFGRNNF--DLVAWNAMM 496
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 59 WDIRQWNVAITTHMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
+D+ W + M C D +A F+S+P V++ +ISG + NG+ + A VF
Sbjct: 555 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFS 614
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAA--------RNLFEMMPKRDVVSWNTMLSGYAQNG 168
QM ++ I+ + S A N ++ D +++ YA+ G
Sbjct: 615 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCG 674
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
D A +F R+ N +WN +L Q+G +EA LF+
Sbjct: 675 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFK 715
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 282/766 (36%), Positives = 425/766 (55%), Gaps = 62/766 (8%)
Query: 75 GCCDS---ALHVFNSMP--RRSSVSYNAMISGYLLNGQ---------------------- 107
G CDS A VF SM +R+ VS+NAMI+ Y NG
Sbjct: 53 GKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVT 112
Query: 108 ----------LDPARQVFDQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRD 153
L R++ +++ L S+ N +++ Y R S+ A+ +F+ + RD
Sbjct: 113 FVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRD 172
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM---LEKNEISWNGLLAAYVQNGRIEEA----CM 206
SWN ++ ++Q+G A RIF M ++ N ++ +++ + + E
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAE 232
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ + + ++V +L+ + K +A+ +FD+M RD VSWN MI Y QN EA
Sbjct: 233 IVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEA 292
Query: 267 QRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAG 318
L++ E + T+ +++ + + R++ + E+ S A++
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG---EITHARNLFDRMPQHDCISWA 375
Y + ++ AR++F AM ++ +W+T+I YA +G + AR +FDR+ D I W
Sbjct: 353 YAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWN 412
Query: 376 AIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
A+I Y Q+G + ++++F EM G + + F +VL CA+L L K LH Q+ +
Sbjct: 413 AMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISE 472
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
E+ V N L+ MY +CGS+EEA F +K V+SW M+A ++++G +AL L
Sbjct: 473 SELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDL 532
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F+ M G+KPDD+T IL C+H G +E+G YF M +G+ P + H+ MVDLLG
Sbjct: 533 FQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLG 592
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
R+GRL +A+ L+++MPFEPD W L ACR++GK EL E AAE ++E++P + Y+
Sbjct: 593 RSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIA 652
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
+SN+YAA G W V+ VR KM +RG+KK+ G S++EV K+H FS G HP D I
Sbjct: 653 MSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEE 712
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI-PAGRPIRVMK 733
L L ++ G+V TK VLHDV E EKE ML YHSEK+A+A+G++S +G PIRV+K
Sbjct: 713 LTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVK 772
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG-GSCSCGDYW 778
NLRVC DCH A K I++I GR IILRD NRFH FS G CSCGDYW
Sbjct: 773 NLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 19/191 (9%)
Query: 404 LNRSP----FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
++R P F +VL +C++ + G+ LH ++ FE VGNAL+ MY KC S+ +
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 460 AYHAFEEI--VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A FE + ++V+SWN MIA YA++G +AL+L+ M G+ D +T V +L AC
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 518 SHTGLVEKGTE----YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
S + +G E FYS + + N+ +V + R G + +A+ + +++
Sbjct: 121 SS---LAQGREIHNRVFYSGLDSFQSLANA-----LVTMYARFGSVGDAKRMFQSLQTR- 171
Query: 574 DAATWGALLGA 584
D +W A++ A
Sbjct: 172 DETSWNAVILA 182
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMP-----RRSSVSYNAMISGY 102
K+R G D WN ITT+++NGC +A+ +F M + +V++ A++
Sbjct: 395 KARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454
Query: 103 LLNGQLDPARQVFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
G+L + + Q+ + +L V N +I+ Y R SL A LF ++ VVSW
Sbjct: 455 ASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWT 514
Query: 159 TMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
M++ ++Q G A +F M ++ +++++ +L G +E+ F A
Sbjct: 515 AMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL 574
Query: 215 EVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYL----A 264
++ + +++ + RL DAK + + MP D V+W T +T + L A
Sbjct: 575 HGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEA 634
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
A+R++E P + AM + Y +G ++ + M E+
Sbjct: 635 AAERVYELDP-SSTAPYIAMSNIYAAHGMWEKVASVRKKMEER 676
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/778 (34%), Positives = 418/778 (53%), Gaps = 72/778 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG-----------QL 108
D+ WN ++ + ++ ++L F SM R S NA Y + QL
Sbjct: 101 DVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQL 160
Query: 109 DPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q F D+ + ++ +VR ++ A LF + + + N+ML GY +
Sbjct: 161 LGMVQKFGSQDDSDVAA--ALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTY 218
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-MLFESKANWEVVSWNSLMGGFV 227
D A +FD M E++ +SWN +++A Q+GR+ EA M+ + ++ + +
Sbjct: 219 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 278
Query: 228 KQKRLGDAKW-------IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
RL +W + +P D + ++ YA+ EA+ +F ++
Sbjct: 279 ACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVA 338
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPE---------------------------------- 306
WT +++G++Q+G E+ +F+ M
Sbjct: 339 WTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCL 398
Query: 307 -----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
+ V N++I+ Y + + A +F M K++ SW +MIT ++Q G I AR
Sbjct: 399 KSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKARE 458
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF-IEMKRYGERLNRSPFTSVLSTCANLA 420
FD M + I+W A++ Y Q G ED LR++ + + R + + ++ CA+L
Sbjct: 459 FFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLG 518
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+ +LG Q+ G+ VKVG V NA++ MY KCG + EA F+ + KD++SWN MI
Sbjct: 519 ANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMIT 578
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GY++HG GK A+ +F+ + G KPD I+ V +LS CSH+GLV++G YF M R + +
Sbjct: 579 GYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNIS 638
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P +H++CMVDLLGRAG L EA++L+ MP +P A WGALL AC+++G ELAE AA+
Sbjct: 639 PGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKH 698
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+FE++ ++G Y+L++ +YA +G+ D +++R MRD+G+KK GYSW+EV NKVH F
Sbjct: 699 VFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKA 758
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
D HP+ I L+EL K+ + G+V + D E +HSEKLAVA+G+
Sbjct: 759 DDVSHPQVIAIRKKLDELMEKIARLGYVRT------DSPRSEI-----HHSEKLAVAFGL 807
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S+PA PI +MKNLR+C DCH IK IS + GR ++RD RFHHF+GGSCSCGDYW
Sbjct: 808 MSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 219/430 (50%), Gaps = 15/430 (3%)
Query: 189 NGLLAAYVQNGRIEEAC-MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
N LL AY+ G + +A +L A+ V++ N ++ G+VK RL DA +F RMP RD
Sbjct: 43 NTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDV 102
Query: 248 VSWNTMITGYAQNN-YLAEAQ------RLFEEAPVKDVFTWTAMVSGYV--QNGKVDEAR 298
SWNT+++GY Q+ YLA + R + +P F + G + ++ +
Sbjct: 103 ASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLG 162
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
M+ + ++ A++ +V+ +D+A LF + + N+M+ GY ++ + H
Sbjct: 163 MVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDH 222
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A LFD MP+ D +SW +++ +QSG ++L + ++M+ G RL+ + +TS L+ CA
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 282
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
L+SL GKQLH Q+++ +V +AL+ +Y KCG +EA F + D++ ++W +
Sbjct: 283 LSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVL 342
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
IAG+ +HG +++ LF M+ + D + ++S C + G + +S+ G
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQ-LHSLCLKSG 401
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
I ++ + + L A+++ + M E D +W +++ A G KA
Sbjct: 402 QIQAVVVSNSLISMYAKCDNLQSAESIFRFMN-EKDIVSWTSMITAHSQVGNI---AKAR 457
Query: 599 EVIFEMEPEN 608
E M +N
Sbjct: 458 EFFDGMSTKN 467
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 157/359 (43%), Gaps = 72/359 (20%)
Query: 8 RQLHSSCILHQHTQSI---NRLQSP-ANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQ 63
RQLHS C+ Q++ N L S A + S +++ R +N K DI
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEK-----------DIVS 439
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG----------------Q 107
W IT H + G A F+ M ++ +++NAM+ Y+ +G
Sbjct: 440 WTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKD 499
Query: 108 LDP----------------ARQVFDQMPQR--------DLVSWNVMISGYVRNKSLSAAR 143
+ P A ++ DQ+ R D N +I+ Y + + AR
Sbjct: 500 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEAR 559
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNG 199
+F+ + +D+VSWN M++GY+Q+G A IFD +L++ + IS+ +L+ +G
Sbjct: 560 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 619
Query: 200 RIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTM 253
++E F+ +S ++ ++ + L +AK + D MP++ W +
Sbjct: 620 LVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGAL 679
Query: 254 ITG--YAQNNYLAE--AQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
++ NN LAE A+ +FE ++P D ++ M Y GK D++ I M +K
Sbjct: 680 LSACKIHGNNELAELAAKHVFELDSP--DSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 736
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 119/300 (39%), Gaps = 46/300 (15%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH-AFEEI 467
F L +C +L + LHG+LV VG + F+ N LL Y CG++ +A +I
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+VI+ N M+ GY + G DA+ LF M + + M G + + +E
Sbjct: 67 AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLES-- 124
Query: 528 EYFYSMNRDYGVIPNSKHY-----TC------------------------------MVDL 552
F SM+R PN+ + +C +VD+
Sbjct: 125 --FVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDM 182
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
R G +D A L + EP ++L Y KT + A E+ M + +
Sbjct: 183 FVRCGTVDLASRLFVRIK-EPTIFCRNSMLVG---YVKTYGVDHALELFDSMPERDVVSW 238
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
++ + + SGR + + + M+ +GV+ T S L ++ + G LH + R
Sbjct: 239 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 298
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 281/765 (36%), Positives = 419/765 (54%), Gaps = 41/765 (5%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQL 108
P D + WN I ++ NGC + L++F M P + + G + + +
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 109 DPARQVFDQMPQ--RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
+ + ++ N +++ Y R +SLS AR +F+ M DVVSWN+++ YA+
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 167 NGYADAARRIFDRMLEK-----NEISWNGLLAAYVQNGR----IEEACMLFESKANWEVV 217
G A +F RM + + I+ +L G + C S+ +
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---EAP 274
N L+ + K + +A +F M V+D VSWN M+ GY+Q +A RLFE E
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 275 VK-DVFTWTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+K DV TW+A +SGY Q G EA R + + + N V+ ++++G + +
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 330 EL------FEAMTCKNVAS-----WNTMITGYAQSGEITHARNLFDRMP--QHDCISWAA 376
E+ + KN N +I YA+ ++ AR +FD + + D ++W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 377 IIAGYAQSGYSEDSLRLFIEM--KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+I GY+Q G + +L L EM + R N + L CA+LA+L +GKQ+H ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 435 VGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
A FV N L+ MY KCGS+ +A F+ ++ K+ ++W +++ GY HG+G++AL
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
+F+ M+ +G K D +T++ +L ACSH+G++++G EYF M +GV P +HY C+VDLL
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GRAGRL+ A L++ MP EP W A L CR++GK EL E AAE I E+ + G Y
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYT 685
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LLSNLYA +GRW DV+++R MR +GVKK G SW+E TF VGD HP IY
Sbjct: 686 LLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ 745
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L + ++K G+V T LHDV +EEK+ +L HSEKLA+AYGIL+ P G IR+ K
Sbjct: 746 VLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITK 805
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLRVC DCH A ++S+I+ IILRD++RFHHF GSCSC YW
Sbjct: 806 NLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 164/350 (46%), Gaps = 21/350 (6%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDC--ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+I+ Y G ++HA +L R P D W ++I Y +G + L LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ F V C ++S+ G+ H + GF + FVGNAL+ MY +C S+ +A
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F+E+ DV+SWN++I YA+ G K AL +F M G +PD+IT+V +L C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
G + + +I N C+VD+ + G +DEA + NM + D +W A++
Sbjct: 245 HSLGKQ-LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMV 302
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL----YAASGRWGDVSKVRLKMRDR 638
Y + E A + +M+ E M V+ + YA G + V +M
Sbjct: 303 AG---YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 639 GVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
G+K +VT S L SVG +H ++ I+ Y + L+++G
Sbjct: 360 GIKPNEVTLISVLS-----GCASVGALMHGKE--IHCYAIKYPIDLRKNG 402
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/720 (36%), Positives = 412/720 (57%), Gaps = 53/720 (7%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQN 167
R+VF+ MP+R++V+W +++GY+++ +LS LF M V V++ ++LS A
Sbjct: 159 RKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQ 218
Query: 168 GYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
G D RR+ + ++ S N L+ Y + G +EEA ++F ++VSWN+LM
Sbjct: 219 GMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLM 278
Query: 224 GGFVKQKRLGDAKWIF----DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
G V +A +F + + + ++ T+I A L A++L +
Sbjct: 279 AGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFH 338
Query: 280 TW----TAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEA 334
++ TA++ Y + G++ A IF M +N VSW AMI G +Q + +A LF
Sbjct: 339 SYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSR 398
Query: 335 MTCKNVA----SWNTMITG-------------------------------YAQSGEITHA 359
M VA +++T++T Y++ A
Sbjct: 399 MREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEA 458
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN- 418
++F + Q D +SW+A++ YAQ+G S+ + +FI+M +G + N +SV+ CA+
Sbjct: 459 LSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASP 518
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
A ++LG+Q H +K V +AL+ MY + GS+E A FE D+D++SWN+M
Sbjct: 519 TAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSM 578
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
++GYA+HG+ + AL +F M+ GI+ D +T + ++ C+H GLVE+G YF SM RDYG
Sbjct: 579 LSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYG 638
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P +HY CMVDL RAG+LDEA +L++ M F W LLGAC+++ EL + AA
Sbjct: 639 ITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAA 698
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
E + +EP ++ YVLLSN+Y+A+G+W + +VR M + VKK G SW++++NKVH+F
Sbjct: 699 EKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSF 758
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
D HP ++IYA L + KLKQ+G+ T LH+V EE+KE ML HSE+LA+A+
Sbjct: 759 IASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAF 818
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G+++ P G P+ + KNLRVC DCH IK +SKI R I++RD +RFHHF+ G CSCGD+W
Sbjct: 819 GLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 23/267 (8%)
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+V +++ Y + + R +F+ MP+ + ++W +++ GY Q G D + LF M+
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G N F SVLS A+ ++LG+++H Q VK G + FV N+L+ MY KCG VE
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
EA F + +D++SWNT++AG +G +AL LF ++ T ++ C+
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 519 -----------HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
H+ ++++G F+S YG + T ++D +AG+L A ++
Sbjct: 318 NIKQLGLARQLHSSVLKRG---FHS----YGNV-----MTALMDAYSKAGQLGNALDIFL 365
Query: 568 NMPFEPDAATWGALLGACRLYGKTELA 594
M + +W A++ C G LA
Sbjct: 366 LMSGSQNVVSWTAMINGCIQNGDVPLA 392
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 132/280 (47%), Gaps = 40/280 (14%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
DV T++V Y++ V + R +F+AMP++N V+W +++ GY+Q + ELF M
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197
Query: 336 --------------------------------------TCKNVASWNTMITGYAQSGEIT 357
C V N+++ YA+ G +
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR +F M D +SW ++AG +G+ ++L+LF + + L +S + +V+ CA
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKDVISWN 476
N+ L L +QLH ++K GF + V AL+ Y K G + A F + ++V+SW
Sbjct: 318 NIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWT 377
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
MI G ++G A LF M+ G+ P+D T IL+A
Sbjct: 378 AMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 60/396 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG------------------ 106
N + + + G + A VF M R VS+N +++G +LNG
Sbjct: 244 NSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITM 303
Query: 107 -----------------QLDPARQVFDQMPQRDLVSW-NVM---ISGYVRNKSLSAARNL 145
QL ARQ+ + +R S+ NVM + Y + L A ++
Sbjct: 304 LTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDI 363
Query: 146 FEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGR 200
F +M ++VVSW M++G QNG A +F RM E N+ +++ +L A V +
Sbjct: 364 FLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLP 423
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ + ++ + +L+ + K +A IF + +D VSW+ M+T YAQ
Sbjct: 424 PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQA 483
Query: 261 NYLAEAQRLF----------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
A +F E + V A + V G+ A I + V
Sbjct: 484 GDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCV 543
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP--- 367
S +A+++ Y + ++ A+ +FE T +++ SWN+M++GYAQ G A ++F +M
Sbjct: 544 S-SALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEG 602
Query: 368 -QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YG 401
+ D +++ ++I G A +G E+ R F M R YG
Sbjct: 603 IEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYG 638
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YGERLNRSPFTSVL 413
+ T AR FD +P + + A + +A+ G +L F+++ R +G R+ VL
Sbjct: 53 DATGARQAFDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVL 110
Query: 414 STCANLASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C ++ LGKQLHG ++ G + G VG +L+ MY K SV + FE + ++V
Sbjct: 111 KVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNV 170
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
++W +++ GY + G D + LF M+ G+ P+ +T +LS + G+V+ G ++
Sbjct: 171 VTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRR-VHA 229
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+ +G ++++ + G ++EA+ + M D +W L+ L G
Sbjct: 230 QSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR-DMVSWNTLMAGLVLNG 285
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 33/164 (20%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
++ + R G +SA +F R VS+N+M+SGY +G A VF QM +
Sbjct: 548 VSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGI---- 603
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
EM D V++ +++ G A G + +R FD M I+
Sbjct: 604 -------------------EM----DGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGIT 640
Query: 188 -----WNGLLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGG 225
+ ++ Y + G+++EA L E + + W +L+G
Sbjct: 641 PTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGA 684
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/679 (37%), Positives = 401/679 (59%), Gaps = 21/679 (3%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYADAARRI 176
RD + +I Y + K L + L ++ N +++ Y++ G D A ++
Sbjct: 3 RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKRLGDA 235
FD M ++N +SW +++ QN + EA F + EV + + LG
Sbjct: 63 FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122
Query: 236 KW------IFDRMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+ + + + E+ + + Y++ + +A ++FEE P KD +WTAM+ GY
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182
Query: 289 VQNGKVDEARMIFDAM-PEKNTVSWNAM---IAGYVQTKRMDMARELFEAMTC----KNV 340
+ G+ +EA + F M E+ T+ + + + K R + ++ ++
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQ-HDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N + Y+++G++ A N+F + + +S+ +I GY ++ E L +F+E++R
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G N F+S++ CAN A+LE G QLH Q++K+ F+ FV + L+ MY KCG +E
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEH 362
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A AF+EI D I+WN++++ + +HG GKDA+ FE M G+KP+ IT + +L+ CSH
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSH 422
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
GLVE+G +YFYSM++ YGV+P +HY+C++DLLGRAGRL EA+ + MPFEP+A W
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
+ LGACR++G E+ + AAE + ++EP+N+G VLLSN+YA +W DV VR++MRD
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 542
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
VKK+ GYSW++V K H F D H K IY L+ L ++K G+V T V D+
Sbjct: 543 VKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMD 602
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
+ KE +L HSE++AVA+ ++S+P G+PI V KNLRVC DCH+AIK ISK+ GR II+R
Sbjct: 603 DXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVR 662
Query: 760 DNNRFHHFSGGSCSCGDYW 778
DN+RFHHF+ GSCSCGDYW
Sbjct: 663 DNSRFHHFTDGSCSCGDYW 681
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 176/392 (44%), Gaps = 38/392 (9%)
Query: 68 ITTHMRN-----GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
+T H+ N G D AL +F++MP+R+ VS+ AMISG N + A + F M
Sbjct: 42 LTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICG 101
Query: 123 LVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYADAAR 174
V S +R S+ + + + K + S + + Y++ G A
Sbjct: 102 EVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDAC 161
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV----SWNSLMG--GFVK 228
++F+ M K+E+SW ++ Y + G EEA + F+ + EV S +G G +K
Sbjct: 162 KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALK 221
Query: 229 QKRLGDA------KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE-EAPVKDVFTW 281
+ G + K F+ D N + Y++ + A +F ++ ++V ++
Sbjct: 222 ACKFGRSVHSSVVKLGFE----SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSY 277
Query: 282 TAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
T ++ GYV+ ++++ +F + E N +++++I ++ +L +
Sbjct: 278 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337
Query: 338 KNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
N + ++ Y + G + HA FD + I+W ++++ + Q G +D+++
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKF 397
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
F M G + N F S+L+ C++ +E G
Sbjct: 398 FERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/541 (43%), Positives = 356/541 (65%), Gaps = 4/541 (0%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACML 207
M +RDVV+W ++SGY + G ARR+FDR+ K+ ++W +L+ YV+ RIEEA L
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
FE VVSWN+++ G+ K + + A +F+RM R+ VSWN +I Q + EA+
Sbjct: 61 FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEAR 120
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
R F+E P +DV +WT MV G ++G+VDEAR +FD MPE+N VSWNAM+ GY + R+D
Sbjct: 121 RRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDE 180
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A +LFE M +N++SWNTMITG+ Q+GE+ AR +F+ MP+ + +SW +I GY Q G S
Sbjct: 181 AFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGES 240
Query: 388 EDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E +L++F+EM K G R N F +VL C+++A L G+Q+H + K ++ FV +A
Sbjct: 241 ESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASA 300
Query: 447 LLVMYCKCGSVEEAYHAFEEIV--DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
LL MY KCG + A F+++V +D++ WN MIA YA HG G +A+ LFE M+ +G K
Sbjct: 301 LLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFK 360
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
P+D++ V +LSACSH GLV++G YF + RD + H+ C+VDL GRAGRL EA +
Sbjct: 361 PNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYD 420
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
+K + + ++ WG LL C +G E+ + AA+ + + +PENAG Y+LLSN+YA+ +
Sbjct: 421 FIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAGTYLLLSNIYASGRK 480
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W + S+VRLKM+++G+KK G SW+EV N+VH F D H + + IY+ + ++ ++K
Sbjct: 481 WREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVFLARDKSHYQSNLIYSLVHDIHAEMKA 540
Query: 685 D 685
+
Sbjct: 541 E 541
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 247/445 (55%), Gaps = 45/445 (10%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ-RDLVSWNVMISGYVRNKSLSAARNL 145
M R V++ A+ISGY+ G + AR++FD++ +D+V+W M+SGYVR K + A L
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
FE+MP ++VVSWNTM+ GY +N D A +F+RM E+N +SWN ++AA VQ GR+EEA
Sbjct: 61 FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEAR 120
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
F+ +V+SW +++ G + R+ +A+ +FDRMP R+ VSWN M+TGYA+N L E
Sbjct: 121 RRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDE 180
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A LFE P +++ +W M++G++QNG++ AR +F+ MPEKN VSW MI GYVQ
Sbjct: 181 AFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGES 240
Query: 326 DMARELFEAM------------------TCKNVASW----------------------NT 345
+ A ++F M C ++A +
Sbjct: 241 ESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASA 300
Query: 346 MITGYAQSGEITHARNLFDR--MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
++ Y++ GE++ AR +FD + Q D + W +IA YA G +++ LF +M+ G +
Sbjct: 301 LLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFK 360
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC-KCGSVEEAYH 462
N + +LS C++ ++ G +L + +A LV C + G ++EAY
Sbjct: 361 PNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYD 420
Query: 463 AFEEIVDKDVIS-WNTMIAGYARHG 486
+++ K S W ++AG HG
Sbjct: 421 FIKQLGTKASSSIWGGLLAGCNAHG 445
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 213/432 (49%), Gaps = 66/432 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ W ++ ++R + A +F MP ++ VS+N MI GY N ++D A +VF++M
Sbjct: 37 DVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMH 96
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+R++VSWN +I+ V+ + AR F+ MPKRDV+SW TM+ G A++G D AR++FDR
Sbjct: 97 ERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDR 156
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M E+N +SWN ++ Y +N R++EA LFE + SWN+++ GF++ L A+ +F
Sbjct: 157 MPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVF 216
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD---------------------- 277
+ MP ++ VSW TMITGY Q A ++F E +KD
Sbjct: 217 NEMPEKNVVSWTTMITGYVQEGESESALKVFVEM-IKDGGARPNEGTFVNVLGACSDMAG 275
Query: 278 -------------------VFTWTAMVSGYVQNGKVDEARMIFD--AMPEKNTVSWNAMI 316
F +A+++ Y + G++ AR IFD + +++ V WN MI
Sbjct: 276 LGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMI 335
Query: 317 AGYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFD-------- 364
A Y A ELFE M N S+ +++ + +G + N FD
Sbjct: 336 AAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSI 395
Query: 365 --RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
R H C+ AG + Y FI K+ G + + S + +L+ C L
Sbjct: 396 QLREDHHACLVDLCGRAGRLKEAYD------FI--KQLGTKASSSIWGGLLAGCNAHGDL 447
Query: 423 ELGKQLHGQLVK 434
E+G+ +L K
Sbjct: 448 EIGQLAAKELEK 459
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 286/839 (34%), Positives = 447/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N+ I + +NG +SA VFN + + V++ AMISG NG + A +F M ++
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 124 -----------------------------VSW---------NVMISGYVRNKSLSAARNL 145
+ W N +++ Y R++ L +A +
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M RD VS+N+++SG Q G++D A +F +M L+ + I+ LL+A G +
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378
Query: 202 EEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ L ++ + +++ SL+ + K + A F + V WN M+ Y
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAY 438
Query: 258 AQNNYLAEAQRLFEEAPVK---------------------------------------DV 278
Q + L+++ +F + ++ +V
Sbjct: 439 GQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV 498
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--- 335
+ + ++ Y + G++ A I +PE + VSW AMIAGYVQ A +LFE M
Sbjct: 499 YVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYR 558
Query: 336 --------------TCKNVASW----------------------NTMITGYAQSGEITHA 359
C + + N +I+ YA+ G I A
Sbjct: 559 GIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEA 618
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F+++ + ISW ++++G AQSGY E++L++F+ M R +N + S +S A+L
Sbjct: 619 YLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASL 678
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++ G+Q+H ++K G+++ V N+L+ +Y K GS+ +A+ F ++ +++VISWN MI
Sbjct: 679 ANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMI 738
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
GY++HG G +AL LFE MK GI P+ +T VG+LSACSH GLV++G +YF SM + + +
Sbjct: 739 TGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDL 798
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P S+HY C+VDLLGRAG+LD A +K MP DA W LL AC ++ E+ E+AA
Sbjct: 799 VPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAH 858
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPE++ YVL+SN+YA S +W R M+DRGVKK G SW+EV+N VH F
Sbjct: 859 HLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFY 918
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD LHP ++IY Y+ L + + G+V + +L++ + +K+ + HSEKLA+A+G
Sbjct: 919 AGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFG 978
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+ PIRVMKNLRVC DCHN IK++SKI R II+RD +RFHHF GG CSC D+W
Sbjct: 979 LLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 186/803 (23%), Positives = 322/803 (40%), Gaps = 193/803 (24%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
++++ Y +G A +VFD+ R + SWN MI +V KS LF M +
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 155 ---------------------------------------VSWNTMLSGYAQNGYADAARR 175
+ N ++ Y++NGY ++A++
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--------------------------- 208
+F+ + K+ ++W +++ QNG EEA +LF
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 209 ---ESKANWEVVSW---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ + V+ W N L+ + + ++L A+ IF M RD VS+N++I+G
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 257 YAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSG------------------------- 287
Q + A LF + D T +++S
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396
Query: 288 ----------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
Y + V+ A F +N V WN M+ Y Q + + E+F M
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456
Query: 336 ---------------TCK----------------------NVASWNTMITGYAQSGEITH 358
TC NV + +I YA+ G++
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLAL 516
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A + R+P+ D +SW A+IAGY Q ++L+LF EM+ G + + F S +S CA
Sbjct: 517 ALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+ +L G+Q+H Q GF A + NAL+ +Y +CG ++EAY AFE+I DK+ ISWN++
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSL 636
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
++G A+ G+ ++AL +F M + + T +SA + +++G + +SM G
Sbjct: 637 VSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTG 695
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ ++ L ++G + +A +M E + +W A++ Y + +A
Sbjct: 696 YDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITG---YSQHGCGMEAL 751
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ EM+ + ++ N G S + L VK+ G + E K+H
Sbjct: 752 RLFEEMK-----VCGIMPNHVTFVGVLSACSHIGL------VKE--GLDYFESMFKIHDL 798
Query: 659 --------SVGDTL--HPEKDRIYAYLEELEFKLKQDGFVYSTKL---VLH---DVGEEE 702
V D L + DR Y++E+ + D ++ T L V+H ++GE
Sbjct: 799 VPKSEHYVCVVDLLGRAGQLDRAMEYIKEM--PIPADAMIWRTLLSACVIHKNIEIGERA 856
Query: 703 KEHMLRYHSEKLAVAYGILSIPA 725
H+L E A I +I A
Sbjct: 857 AHHLLELEPEDSATYVLISNIYA 879
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 217/512 (42%), Gaps = 90/512 (17%)
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLG 233
+R + N ++ LL + +G + E C + +S + E + +SL+ + +
Sbjct: 51 ERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQH 110
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYA--QNNY--LAEAQRLFEEAPVKDVFTWTAMVSG-- 287
A +FD R SWN MI + ++N+ +R+ E + +T+ ++
Sbjct: 111 GAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV 170
Query: 288 ----------------------------------YVQNGKVDEARMIFDAMPEKNTVSWN 313
Y +NG ++ A+ +F+ + K+ V+W
Sbjct: 171 GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230
Query: 314 AMIAGYVQTKRMDMARELF-------------------------------EAMTCKNVAS 342
AMI+G Q + A LF E + C V
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL-VIK 289
Query: 343 W---------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
W N ++ Y++S ++ A +F M D +S+ ++I+G Q G+S+ +L L
Sbjct: 290 WGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALEL 349
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F +M+R + + S+LS CA++ +L G QLH +K G A + +LL +Y K
Sbjct: 350 FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK 409
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
C VE A+ F ++++ WN M+ Y + D+ +F M+ G+ P+ T I
Sbjct: 410 CADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L C+ G + G E ++ G N + ++D+ + G+L A +++ +P E
Sbjct: 470 LRTCTSLGALYLG-EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-ED 527
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEME 605
D +W A++ Y + ++ +A ++ EME
Sbjct: 528 DVVSWTAMIAG---YVQHDMFSEALQLFEEME 556
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 6/234 (2%)
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
++L M+ G R N + +L C SL +LH ++ K GF+ + ++L+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y + G A F+E ++ V SWN MI + LF M GI P+ T
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
G+L AC + + +S YG + ++DL + G ++ A+ + N
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF-NCI 221
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYAAS 622
D TW A++ G L E+A + +M YVL S L A++
Sbjct: 222 CMKDIVTWVAMISGLSQNG---LEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 43/194 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N I+ + R G A F + ++++S+N+++SG +G + A QVF +M
Sbjct: 598 DLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRML 657
Query: 119 ---PQRDLVSW-----------------------------------NVMISGYVRNKSLS 140
+ ++ ++ N +IS Y ++ S+S
Sbjct: 658 RTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSIS 717
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A F M +R+V+SWN M++GY+Q+G A R+F+ M + N +++ G+L+A
Sbjct: 718 DAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACS 777
Query: 197 QNGRIEEACMLFES 210
G ++E FES
Sbjct: 778 HIGLVKEGLDYFES 791
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/599 (40%), Positives = 380/599 (63%), Gaps = 17/599 (2%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I+ +R G + A +F+S +++++N MI+ Y+ ++ ARQ+F++MP RD+V
Sbjct: 61 NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120
Query: 125 SWNVMISGYVR--NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
SWN+M+SGY+ K + ARN+F+ MP+ D VSWNTMLSGYA++G D A +F+ M E
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPE 180
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF--- 239
+N +SWN +++ Y+ NG +E+A F+ + S +L+ G ++ +L +A+ I
Sbjct: 181 RNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQY 240
Query: 240 -DRMPVRDEV-SWNTMITGYAQNNYLAEAQRLFEEAPV--------KDVFTWTAMVSGYV 289
+ D V ++NT+I GY Q EA++LF+ P+ ++V +W +M+ YV
Sbjct: 241 GGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYV 300
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+ G + AR +FD M E++T SWN MI+GYVQ M A LF M + SWN MI+G
Sbjct: 301 RAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISG 360
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
+++ G + A +LF R+P+ +SW ++I+GY ++ + ++ +F++M+ G++ +R
Sbjct: 361 FSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTL 420
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-V 468
+S+LS CA L L LG Q+H QLV F A + N+L+ MY +CG++ EA F+E+ +
Sbjct: 421 SSILSACAGLVDLVLGTQIH-QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNL 479
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+DVISWN MI GYA HGF +AL LF+ MK ++P IT + +L+AC+H GL+E+G
Sbjct: 480 QRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRR 539
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
F SM +G+ P +HY +VD++GR G+L+EA +L+ +MP EPD A WGALLGAC+++
Sbjct: 540 EFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVH 599
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
E+A AAE + +++PE++ YVLL N+YA GRW D +++R M V+K GYS
Sbjct: 600 NNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYS 658
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 270/543 (49%), Gaps = 64/543 (11%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ 107
++RN + D WN ++ + ++G D A +FN MP R+ VS+NAM+SGYL+NG
Sbjct: 139 RARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVSGYLMNGH 198
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRN-KSLSAARNLFEM---MPKRDVV-SWNTMLS 162
++ A + F MP+RD S +ISG ++N K + A R L + + K D+V ++NT+++
Sbjct: 199 VEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIA 258
Query: 163 GYAQNGYADAARRIFDRM--------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
GY Q G A AR++FDR+ +N ISWN ++ YV+ G I A LF+
Sbjct: 259 GYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVER 318
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ SWN+++ G+V+ + +A +F RMP D +SWN MI+G+++ L A LF+ P
Sbjct: 319 DTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIP 378
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTV-SWNAMIAGYVQTKRMDM 327
K + +W +M+SGY +N A IF M P+++T+ S + AG V
Sbjct: 379 EKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQ 438
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGY 386
+L ++ N+++T Y++ G I AR +FD M Q D ISW A+I GYA G+
Sbjct: 439 IHQLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGF 498
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGN 445
+ ++L+LF MK+ + + F SVL+ CA+ +E G++ +V G +
Sbjct: 499 ATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQV---- 554
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
E Y A +I+ RHG ++A+ L SM +P
Sbjct: 555 -------------EHYAALVDII--------------GRHGQLEEAMSLINSMPC---EP 584
Query: 506 DDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
D +L AC ++ + E + + +S Y + ++ GR D+A
Sbjct: 585 DKAVWGALLGACKVHNNVEMARAAAEALMKLQPE-----SSAPYVLLHNMYADVGRWDDA 639
Query: 563 QNL 565
+
Sbjct: 640 AEM 642
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/540 (42%), Positives = 352/540 (65%)
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
++ +DV ++N + A+ G AAR++FD M ++ +SWN ++ Y +NG +E+
Sbjct: 39 IKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESK 98
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
LF VVSWNS++ G ++ +R+ +A F MP R+ SWN MI+G + + + E
Sbjct: 99 RLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEE 158
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A RLFEE P ++V ++TAMV GY + G++++AR +F+ MP+KN VSW MI+GYV+ +
Sbjct: 159 ASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKF 218
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
D A LFE M KN+ + MITGY + G+ A+ LFD++P D SW A+I GYAQ+G
Sbjct: 219 DEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNG 278
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
E++L+L +M + G + + S SVL+ C++LASL+ G++ H ++K G+E+ + N
Sbjct: 279 SGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICN 338
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MYCKCGS+ ++ AF +I DV+SWN MIA +ARHGF AL F M++ ++P
Sbjct: 339 ALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEP 398
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D IT + +LSAC H G V + +F SM Y ++P +H+ C+VD+L R G++++A +
Sbjct: 399 DGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKI 458
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
++ MPFE D WGALL AC ++ +L E AA+ I E+EP+N+G YV+LSN+YAA+G W
Sbjct: 459 IQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMW 518
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
G+V++VR MR++GVKK YSW+E+ NKVH F D HPE RI L+ ++ ++ D
Sbjct: 519 GEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELKGMKLQMIAD 578
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 230/440 (52%), Gaps = 18/440 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ +NV I R G +A +F+ MP R +VS+N++I+GY NG D ++++F MP
Sbjct: 46 DVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMP 105
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+++VSWN MI+G + ++ + A F+ MP+R+ SWN M+SG + + A R+F+
Sbjct: 106 TKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEE 165
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M +N IS+ ++ Y + G IE+A LF VVSW ++ G+V+ + +A+ +F
Sbjct: 166 MPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLF 225
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
++MP ++ V+ MITGY + +A+ LF++ P +D+ +W AM++GY QNG +EA
Sbjct: 226 EQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALK 285
Query: 300 IFDAM------PEKNTVSWNAMIAGYVQTKRMDMARE----LFEAMTCKNVASWNTMITG 349
+ M P+ +T+ +++ + R+ + ++ ++ N +IT
Sbjct: 286 LHSQMLKMGMQPDHSTLI--SVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITM 343
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G I + F ++ D +SW A+IA +A+ G+ + +L F EM+ + F
Sbjct: 344 YCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITF 403
Query: 410 TSVLSTCANLASLELGKQLHGQLV---KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S+LS C + + ++ K+ F L+ + + G VE+AY +E
Sbjct: 404 LSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFA--CLVDILSRGGQVEKAYKIIQE 461
Query: 467 I-VDKDVISWNTMIAGYARH 485
+ + D W ++A H
Sbjct: 462 MPFEADCGIWGALLAACHVH 481
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 19/247 (7%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L RSP S++ T +Q H +K+ + N + + G++ A
Sbjct: 12 LPRSP--SIIRTIFLPIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQL 69
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+E+ +D +SWN++I GY ++G ++ LF M T + ++ +++ C +
Sbjct: 70 FDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNV----VSWNSMIAGCIEDERI 125
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
++ +YF +M + N+ + M+ L R R++EA L + MP + ++ A++
Sbjct: 126 DEAWQYFQAMPQR-----NTASWNAMISGLVRYDRVEEASRLFEEMP-RRNVISYTAMVD 179
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV--- 640
Y K E+A + M +N + ++ + Y +G++ + + +M D+ +
Sbjct: 180 G---YAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAM 236
Query: 641 -KKVTGY 646
+TGY
Sbjct: 237 TAMITGY 243
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 43/196 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D +I IT + + G D A +F+ +P R S+NAMI+GY NG + A ++ Q
Sbjct: 230 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 289
Query: 118 M-------PQRDLVS--------------------------------WNVMISGYVRNKS 138
M L+S N +I+ Y + S
Sbjct: 290 MLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGS 349
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ + F + DVVSWN M++ +A++G+ D A F M +E + I++ LL+A
Sbjct: 350 ILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSA 409
Query: 195 YVQNGRIEEACMLFES 210
G++ E+ F S
Sbjct: 410 CGHAGKVHESLNWFNS 425
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 291/824 (35%), Positives = 431/824 (52%), Gaps = 158/824 (19%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNL---------------FEMMPK 151
AR+VFD++P VSW+ +++ Y N +L A R++ + P
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPD 115
Query: 152 R-----------------DVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLA 193
D+ N +++ Y G+ D AR +FD E+N +SWNGL++
Sbjct: 116 AGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMS 175
Query: 194 AYVQNGR-------------------------IEEAC--------------MLFESKANW 214
AYV+N R + AC M+ + +
Sbjct: 176 AYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDK 235
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---- 270
+V + N+L+ + K + A +F ++P D VSWN I+G + + A L
Sbjct: 236 DVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMK 295
Query: 271 EEAPVKDVFTWTA-----------------------------------MVSGYVQNGKVD 295
V +VFT ++ +V Y ++G +D
Sbjct: 296 SSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLD 355
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF--------------EAMTCKNVA 341
+A+ +FD +P+++ V WNA+I+G + A LF A K+ A
Sbjct: 356 DAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTA 415
Query: 342 SW-------------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
S N +I Y + + +A +F++ +D I++ +
Sbjct: 416 SLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTS 475
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF--TSVLSTCANLASLELGKQLHGQLVK 434
+I +Q + ED+++LF+EM R G L+ PF +S+L+ CA+L++ E GKQ+H L+K
Sbjct: 476 MITALSQCDHGEDAIKLFMEMLRKG--LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
F + F GNAL+ Y KCGS+E+A AF + +K V+SW+ MI G A+HG GK AL +
Sbjct: 534 RQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDV 593
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F M I P+ ITM +L AC+H GLV++ YF SM +G+ +HY CM+DLLG
Sbjct: 594 FHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLG 653
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAG+LD+A L+ +MPF+ +AA WGALL A R++ EL AAE +F +EPE +G +VL
Sbjct: 654 RAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVL 713
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
L+N YA++G W DV+KVR M+D VKK SW+E+++KVHTF VGD HP IYA
Sbjct: 714 LANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAK 773
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
L+EL + + G+V + ++ LHDV + EKE +L +HSE+LAVA+ ++S PAG PIRV KN
Sbjct: 774 LDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKN 833
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LR+C DCH A K IS IV R II+RD NRFHHF G+CSC DYW
Sbjct: 834 LRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 146/631 (23%), Positives = 267/631 (42%), Gaps = 125/631 (19%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV--VSWNTMLSGYAQNGYADAARRIFD 178
R L + +++ Y +SL ++ + K + V N +LS Y++ +ARR+FD
Sbjct: 2 RSLETIGPLLTRYAATQSLLQGAHIHAHLLKSGLFAVFRNHLLSFYSKCRLPGSARRVFD 61
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV---------------------- 216
+ + +SW+ L+ AY N +A F S + V
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQ 121
Query: 217 ---VSWNSLMGG--FVKQKRLG---------DAKWIFDRMPV-RDEVSWNTMITGYAQNN 261
++ + +GG FV + +A+ +FD R+ VSWN +++ Y +N+
Sbjct: 122 LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKND 181
Query: 262 YLAEAQRLFEE---------------------------------APV------KDVFTWT 282
+ A ++F E A V KDVFT
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN 241
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------- 335
A+V Y + G + A ++F +PE + VSWNA I+G V A EL M
Sbjct: 242 ALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 336 ----------TCKNVASWNT----------------------MITGYAQSGEITHARNLF 363
C ++N ++ YA+ G + A+ +F
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVF 361
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
D +PQ D + W A+I+G + ++L LF M++ G +NR+ +VL + A+L ++
Sbjct: 362 DWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAIS 421
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
+Q+H K+GF + V N L+ Y KC + AY FE+ D+I++ +MI +
Sbjct: 422 DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALS 481
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPN 542
+ G+DA+ LF M G+ PD + +L+AC+ E+G + + + + R + + +
Sbjct: 482 QCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSD 539
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+V + G +++A +P E +W A++G +G ++A +V
Sbjct: 540 VFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVSWSAMIGGLAQHGH---GKRALDVFH 595
Query: 603 EMEPEN-AGMYVLLSNLYAASGRWGDVSKVR 632
M E+ + ++ ++++ A G V + +
Sbjct: 596 RMVDEHISPNHITMTSVLCACNHAGLVDEAK 626
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 176/435 (40%), Gaps = 95/435 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + G A VF +P VS+NA ISG +L+G A ++ Q
Sbjct: 234 DKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPKRDVVSWNTMLSG----YAQNGY 169
M LV +S ++ + S A R + M K + S N + G YA++G
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGL 353
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-------------------ES 210
D A+++FD + +++ + WN L++ + EA LF +S
Sbjct: 354 LDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Query: 211 KANWEVVS--------------------WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
A+ E +S N L+ + K L A +F++ D +++
Sbjct: 414 TASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAF 473
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVK---------------------------------- 276
+MIT +Q ++ +A +LF E K
Sbjct: 474 TSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 277 -----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
DVF A+V Y + G +++A + F +PEK VSW+AMI G Q A ++
Sbjct: 534 RQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDV 593
Query: 332 FEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYA 382
F M ++++ + +++ +G + A+ F+ M + I +A +I
Sbjct: 594 FHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLG 653
Query: 383 QSGYSEDSLRLFIEM 397
++G +D++ L M
Sbjct: 654 RAGKLDDAMELVNSM 668
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/736 (36%), Positives = 407/736 (55%), Gaps = 87/736 (11%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKN 184
++S + + S++ A +FE + + ++TML GYA+N + A RM ++
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 185 EISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
++ LL N ++ L + V + ++ + K +++ DA +FD
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQ----RLFEEAPVKDVFTW--------------- 281
RMP RD VSWNT+I G++QN + +A R+ +E D T
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 282 --------------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
TA+ Y + G V+ AR+IFD M +K VSWN+M+ GYVQ
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 322 TKRMDMARELFEAM-----------------TC----------------------KNVAS 342
+ A +FE M C +++
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N++I+ Y++ + A ++F+ + +SW A+I GYAQ+G ++L F EMK G
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ + SV+ A L+ K +HG +++ + FV AL+ MY KCG++ A
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ I D+ VI+WN MI GY HG G+ AL LF+ MK ++P+DIT + ++SACSH+GL
Sbjct: 507 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 566
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V++G +F SM +DYG+ P+ HY MVDLLGRAGR+ EA + ++NMP P +GA+L
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAML 626
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
GAC+++ E+ EKAA+ +FE+ P+ G +VLL+N+YA++ +W V++VR M +G+KK
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKK 686
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G S +E++N+VH+F G T HP+ RIYA+LEEL +++K G+V T L+L DV ++
Sbjct: 687 TPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDV 745
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
+E +L HSEKLA+A+G+L+ G I V KNLRVC DCHNA K+IS + GR II+RD
Sbjct: 746 QEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQ 805
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF G CSCGDYW
Sbjct: 806 RFHHFKNGICSCGDYW 821
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 172/386 (44%), Gaps = 91/386 (23%)
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTMLS 162
Q+D A ++FD+MP+RDLVSWN +I+G+ +N K+L + + + D ++ T+L
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 163 G-----------------------------------YAQNGYADAARRIFDRMLEKNEIS 187
Y++ G + AR IFD M +K +S
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS 316
Query: 188 WNGLLAAYVQNGRIEEACMLFES------------------------------------- 210
WN ++ YVQNG E+A +FE
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 211 --KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
++ NSL+ + K KR+ A IF+ + R VSWN MI GYAQN ++EA
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 269 LFEEAPV----KDVFTWTAMVSGYVQNGKVDEAR----MIFDAMPEKNTVSWNAMIAGYV 320
F E D FT +++ + A+ +I + +KN A++ Y
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAA 376
+ + MAR+LF+ ++ ++V +WN MI GY G A +LFD+M + + I++ +
Sbjct: 497 KCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 377 IIAGYAQSGYSEDSLRLFIEMKR-YG 401
+I+ + SG ++ LR F MK+ YG
Sbjct: 557 VISACSHSGLVDEGLRHFKSMKQDYG 582
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 56/317 (17%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------------- 121
G ++A +F+ M +++ VS+N+M+ GY+ NG+ + A VF++M +
Sbjct: 297 GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEAL 356
Query: 122 --------------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
D+ N +IS Y + K + A ++F + R V
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CML 207
SWN M+ GYAQNG A F M ++ + + ++ A + A ++
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
S + + +L+ + K + A+ +FD + R ++WN MI GY + A
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536
Query: 268 RLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSWNAMIAG 318
LF++ A + T+ +++S +G VDE F +M E + + AM+
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 319 YVQTKRMDMARELFEAM 335
+ R+ A + E M
Sbjct: 597 LGRAGRIKEAWDFIENM 613
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 53/268 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI N I+ + + D A +FN++ R+ VS+NAMI GY NG++ A F +M
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 120 Q----------------------------------RDLVSWNVMISG-----YVRNKSLS 140
R + N+ ++ Y + ++
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AR LF+M+ R V++WN M+ GY +G AA +FD+M +E N+I++ +++A
Sbjct: 503 MARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACS 562
Query: 197 QNGRIEEACMLFES-KANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVSWN 251
+G ++E F+S K ++ + G V + R+ +A + MP+ ++
Sbjct: 563 HSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVY 622
Query: 252 TMITGYA---QNNYLAE--AQRLFEEAP 274
+ G +N + E A++LFE P
Sbjct: 623 GAMLGACKIHKNIEVGEKAAKKLFELNP 650
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/752 (36%), Positives = 415/752 (55%), Gaps = 87/752 (11%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
AR V + Q +S +++ Y +++ AR+ F+ + RDV +WN M+SGY + G +
Sbjct: 75 ARLVVSKQIQNVCISAK-LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNS 133
Query: 171 DAARRIFDRMLEKNEIS-----WNGLLAA---YVQNGRIEEACMLFESKANWEVVSWNSL 222
R F + + ++ + +L A + +I C+ + W+V SL
Sbjct: 134 SEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIH--CLALKFGFMWDVYVAASL 191
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ + + K +G+A+ +FD MPVRD SWN MI+GY Q+ EA L D T
Sbjct: 192 IHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVV 251
Query: 283 AMVSG-----------------------------------YVQNGKVDEARMIFDAMPEK 307
+++S Y + G++ + + +FD M +
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAM--------------------------TCKNVA 341
+ +SWN++I Y ++ A LF+ M C++V
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 342 SW--------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ N ++ YA+ G + AR +F+ +P D ISW II+GYAQ+G++
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 431
Query: 388 EDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+++ ++ M+ GE N+ + SVL C+ +L G +LHG+L+K G FV +
Sbjct: 432 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS 491
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L MY KCG +E+A F +I + + WNT+IA + HG G+ A+MLF+ M G+KPD
Sbjct: 492 LADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 551
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT V +LSACSH+GLV++G F M DYG+ P+ KHY CMVD+ GRAG+L+ A +
Sbjct: 552 HITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI 611
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
K+M +PDA+ WGALL ACR++G +L + A+E +FE+EPE+ G +VLLSN+YA++G+W
Sbjct: 612 KSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWE 671
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
V ++R +G++K G+S +EV NKV F G+ HP + +Y L L+ KLK G
Sbjct: 672 GVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V + VL DV ++EKEH+L HSE+LA+A+ +++ PA IR+ KNLRVC DCH+ K
Sbjct: 732 YVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTK 791
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKI R II+RD+NRFHHF G CSCGDYW
Sbjct: 792 FISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 195/470 (41%), Gaps = 96/470 (20%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WD+ I + R +A +F+ MP R S+NAMISGY +G A + + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 119 PQRDLVSWNVMISGYVR----NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
D V+ ++S N+ ++ + + ++ N ++ YA+ G +
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 175 RIFDRMLEKNEISWNGLLAAYVQN---------------GRIEEACML------------ 207
++FDRM ++ ISWN ++ AY N RI+ C+
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 208 ----------FESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
F + W ++ N+++ + K + A+ +F+ +P D +SWNT+I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 255 TGYAQNNYLAEA----------------------------------------QRLFEEAP 274
+GYAQN + +EA RL +
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
DVF T++ Y + G++++A +F +P N+V WN +IA + + A LF+
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542
Query: 335 MTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSG 385
M + V ++ T+++ + SG + + F+ M I+ + ++ Y ++G
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
E +L+ +K + + S + ++LS C +++LGK L +V
Sbjct: 603 QLETALKF---IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 25/312 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI N + + + G DSA VFN +P +S+N +ISGY NG A ++++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 120 QRDLV-----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYA 170
+ + +W ++ + +L L + K DV ++ Y + G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGF 226
+ A +F ++ N + WN L+A + +G E+A MLF+ + V +++ +L+
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 227 VKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFT 280
+ + +W F+ M ++ + M+ Y + L A + + ++ D
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 281 WTAMVSGYVQNGKVDEARM----IFDAMPEK--NTVSWNAMIAGYVQTKRMDMARELFEA 334
W A++S +G VD ++ +F+ PE V + M A + + +D R +
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 335 MTCKNVASWNTM 346
+ W++M
Sbjct: 683 KGLRKTPGWSSM 694
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/802 (34%), Positives = 422/802 (52%), Gaps = 99/802 (12%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF-------DQ 117
N+ + + + G A +F MPRR S+N ++SGY +G+ A + F D
Sbjct: 99 NIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDS 158
Query: 118 MP---------------------------------QRDLVSWNVMISGYVRNKSLSAARN 144
+P Q D ++ +VR ++ A
Sbjct: 159 LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASK 218
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
F + + V N+ML+GYA++ D A +F+ M E++ +SWN +++A Q+GR EA
Sbjct: 219 QFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREA 278
Query: 205 CMLFESKANWEV----VSWNSLMGGFVKQKRLGDAK----WIFDRMPVRDEVSWNTMITG 256
+ N V ++ S + K LG K + +P D + M+
Sbjct: 279 LSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVEL 338
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------------ 304
YA+ EA+R+F ++ +WT ++ G++Q G E+ +F+ M
Sbjct: 339 YAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFAL 398
Query: 305 ---------------------------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+ V N++I+ Y + + A +F +M
Sbjct: 399 ATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEE 458
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+++ SW M+T Y+Q G I AR FD M + I+W A++ Y Q G ED L+++ M
Sbjct: 459 RDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAM 518
Query: 398 KRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
+ + + + ++ CA++ + +LG Q+ G VKVG V NA++ MY KCG
Sbjct: 519 LTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGR 578
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+ EA F+ + KD++SWN MI GY++HG GK A+ +F+ M G KPD I+ V +LS+
Sbjct: 579 ISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSS 638
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH+GLV++G YF + RD+ V P +H++CMVDLL RAG L EA+NL+ MP +P A
Sbjct: 639 CSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAE 698
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
WGALL AC+ +G ELAE AA+ +F+++ ++G Y+LL+ +YA +G+ D ++VR MR
Sbjct: 699 VWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMR 758
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
D+G+KK GYSW+EV+NKVH F D HP+ I L+EL K+ Q G+V + L
Sbjct: 759 DKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESL--- 815
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
+ H HSEKLAVA+GI+++PA PI +MKNLR+C DCH IK IS + GR
Sbjct: 816 ----RSEIH----HSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREF 867
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
++RD RFHHF GGSCSCGDYW
Sbjct: 868 VIRDAVRFHHFKGGSCSCGDYW 889
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 211/435 (48%), Gaps = 56/435 (12%)
Query: 220 NSLMGGFVKQKRLGDAKWIF-DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
N+L+ ++ L DA+ + + + ++ N M+ GYA+ L++A+ LF P +DV
Sbjct: 67 NTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDV 126
Query: 279 FTWTAMVSGYVQNGKVDEARMIF-------DAMPEKNT----------VSWN-------- 313
+W ++SGY Q+G+ +A F D++P T + W+
Sbjct: 127 TSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLG 186
Query: 314 ---------------AMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
++ +V+ +D A + F + V N+M+ GYA+S + H
Sbjct: 187 LLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDH 246
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A LF+ MP+ D +SW +++ +QSG + ++L + ++M G RL+ + +TS L+ CA
Sbjct: 247 ALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAK 306
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
L+SL GKQLH Q+++ +V +A++ +Y KCG +EA F + D++ +SW +
Sbjct: 307 LSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVL 366
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I G+ ++G ++L LF M+ + D + I+S CS+ + + +S++ G
Sbjct: 367 IGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQ-LHSLSLKSG 425
Query: 539 -----VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
VI NS ++ + + G L A+++ +M E D +W +L A Y +
Sbjct: 426 HTRAVVISNS-----LISMYAKCGNLQNAESIFSSME-ERDIVSWTGMLTA---YSQVGN 476
Query: 594 AEKAAEVIFEMEPEN 608
KA E M N
Sbjct: 477 IGKAREFFDGMSTRN 491
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/568 (23%), Positives = 244/568 (42%), Gaps = 94/568 (16%)
Query: 127 NVMISGYVRNKSLSAARNLFEM-MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
N ++ Y+ +L AR L + + +V++ N M++GYA+ G A +F RM ++
Sbjct: 67 NTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDV 126
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV---KQKRLGDAKW----- 237
SWN L++ Y Q+GR +A F S S +SL F K G W
Sbjct: 127 TSWNTLMSGYYQSGRFLDAMESFVSMRR----SGDSLPNAFTFGCAMKSCGALGWHEVAL 182
Query: 238 ----IFDRMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
+ + + + T I + + + A + F + VF +M++GY ++
Sbjct: 183 QLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSY 242
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--------MDMAR--------------- 329
VD A +F++MPE++ VSWN M++ Q+ R +DM
Sbjct: 243 GVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLT 302
Query: 330 ----------------ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
++ ++ C + + M+ YA+ G AR +F + + +S
Sbjct: 303 ACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVS 362
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +I G+ Q G +SL LF +M+ +++ +++S C+N + L +QLH +
Sbjct: 363 WTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSL 422
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD---------------------- 471
K G + N+L+ MY KCG+++ A F + ++D
Sbjct: 423 KSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKARE 482
Query: 472 ---------VISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTG 521
VI+WN M+ Y +HG +D L ++ +M T + PD +T V + C+ G
Sbjct: 483 FFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMG 542
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+ G + G+I ++ ++ + + GR+ EA+ + + D +W A+
Sbjct: 543 ANKLGDQ-ITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS-RKDLVSWNAM 600
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENA 609
+ Y + + ++A E+ +M + A
Sbjct: 601 ITG---YSQHGMGKQAIEIFDDMLKKGA 625
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 157/348 (45%), Gaps = 65/348 (18%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVA 67
RQLHS + HT+++ + S + + Y L+ + S + + DI W
Sbjct: 415 RQLHSLSLKSGHTRAV--VISNSLISMYAKCGNLQNAESIFSSMEER-----DIVSWTGM 467
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLV-S 125
+T + + G A F+ M R+ +++NAM+ Y+ +G + +++ M ++D++
Sbjct: 468 LTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPD 527
Query: 126 W--------------------------------------NVMISGYVRNKSLSAARNLFE 147
W N +I+ Y + +S AR +F+
Sbjct: 528 WVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFD 587
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEE 203
+ ++D+VSWN M++GY+Q+G A IFD ML+K + IS+ +L++ +G ++E
Sbjct: 588 FLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQE 647
Query: 204 ACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITGY 257
F+ VS ++ ++ + L +AK + D MP++ W +++
Sbjct: 648 GKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSAC 707
Query: 258 AQ--NNYLAE--AQRLFE-EAPVKDVFTWTAMVSGYVQNGK-VDEARM 299
NN LAE A+ LF+ ++P D + + Y GK VD A++
Sbjct: 708 KTHGNNELAELAAKHLFDLDSP--DSGGYMLLAKIYADAGKSVDSAQV 753
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 121/296 (40%), Gaps = 38/296 (12%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE-EI 467
L +C +L + LHG+LV VG + F+ N LL Y CG++ +A +I
Sbjct: 31 LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+ +VI+ N M+ GYA+ G DA LF M + D + ++S +G
Sbjct: 91 TEPNVITHNIMMNGYAKLGSLSDAEELFGRMP----RRDVTSWNTLMSGYYQSGRFLDAM 146
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK-----NMPFEPDAAT----- 577
E F SM R +PN+ + C + G G + A L+ +PD AT
Sbjct: 147 ESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDM 206
Query: 578 ---WGALLGA-------------CR-----LYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
GA+ A CR Y K+ + A E+ M + + ++
Sbjct: 207 FVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMV 266
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
+ + SGR + V + M +RGV+ T S L K+ + G LH + R
Sbjct: 267 SALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIR 322
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/599 (40%), Positives = 380/599 (63%), Gaps = 17/599 (2%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I+ +R G + A +F+S +++++N MI+ Y+ ++ ARQ+F++MP RD+V
Sbjct: 61 NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120
Query: 125 SWNVMISGYVR--NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
SWN+M+SGY+ K + ARN+F+ MP+ D VSWNTMLSGYA++G D A +F+ M E
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPE 180
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF--- 239
+N +SWN +++ Y+ NG +E+A F+ + S +L+ G ++ +L +A+ I
Sbjct: 181 RNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQY 240
Query: 240 -DRMPVRDEV-SWNTMITGYAQNNYLAEAQRLFEEAPV--------KDVFTWTAMVSGYV 289
+ D V ++NT+I GY Q EA++LF+ P+ ++V +W +M+ YV
Sbjct: 241 GGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYV 300
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+ G + AR +FD M E++T SWN MI+GYVQ M A LF M + SWN MI+G
Sbjct: 301 RAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISG 360
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
+++ G + A +LF R+P+ +SW ++I+GY ++ + ++ +F++M+ G++ +R
Sbjct: 361 FSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTL 420
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-V 468
+S+LS CA L L LG Q+H QLV F A + N+L+ MY +CG++ EA F+E+ +
Sbjct: 421 SSILSACAGLVDLVLGTQIH-QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNL 479
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+DVISWN MI GYA HGF +AL LF+ MK ++P IT + +L+AC+H GL+E+G
Sbjct: 480 QRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRR 539
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
F SM +G+ P +HY +VD++GR G+L+EA +L+ +MP EPD A WGALLGAC+++
Sbjct: 540 EFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVH 599
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
E+A AAE + +++PE++ YVLL N+YA GRW D +++R M V+K GYS
Sbjct: 600 NNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYS 658
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 246/461 (53%), Gaps = 23/461 (4%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ 107
++RN + D WN ++ + ++G D A +FN MP R+ VS+NAM+SGYL+NG
Sbjct: 139 RARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPERNVVSWNAMVSGYLMNGH 198
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRN-KSLSAARNLFEM---MPKRDVV-SWNTMLS 162
++ A + F MP+RD S ++SG ++N K + A R L + + K D+V ++NT+++
Sbjct: 199 VEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIA 258
Query: 163 GYAQNGYADAARRIFDRM--------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
GY Q G A AR++FDR+ +N ISWN ++ YV+ G I A LF+
Sbjct: 259 GYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVER 318
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ SWN+++ G+V+ + +A +F RMP D +SWN MI+G+++ L A LF+ P
Sbjct: 319 DTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIP 378
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTV-SWNAMIAGYVQTKRMDM 327
K + +W +M+SGY +N A IF M P+++T+ S + AG V
Sbjct: 379 EKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQ 438
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGY 386
+L ++ N+++T Y++ G I AR +FD M Q D ISW A+I GYA G+
Sbjct: 439 IHQLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGF 498
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGN 445
+ ++L+LF MK+ + + F SVL+ CA+ +E G++ +V G +
Sbjct: 499 ATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYA 558
Query: 446 ALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
AL+ + + G +EEA + + D W ++ H
Sbjct: 559 ALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVH 599
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 24/322 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN I ++R G SA +F+ M R + S+N MISGY+ + A +F +MP
Sbjct: 288 NVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMP 347
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF-- 177
+ D +SWN+MISG+ SL A +LF+ +P++ +VSWN+M+SGY +N A IF
Sbjct: 348 EPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQ 407
Query: 178 --------DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
DR + +S L V +I + L ++ NSL+ + +
Sbjct: 408 MQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQ---LVTKAFIADLPINNSLVTMYSRC 464
Query: 230 KRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAM 284
+ +A+ +FD M + RD +SWN MI GYA + + EA +LF+ +V T+ ++
Sbjct: 465 GAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISV 524
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK- 338
++ G ++E R F++M + + + A++ + +++ A L +M C+
Sbjct: 525 LNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEP 584
Query: 339 NVASWNTMITGYAQSGEITHAR 360
+ A W ++ + AR
Sbjct: 585 DKAVWGALLGACKVHNNVEMAR 606
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/541 (43%), Positives = 341/541 (63%), Gaps = 1/541 (0%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQ 197
+S AR LF+ P RDVVSW +++ YA G AR +FDR +N ++W LL+ Y +
Sbjct: 51 VSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYAR 110
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
GR++EA LF VVSWN+++ + R+GDA +F+ MPVRD SWN ++
Sbjct: 111 AGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAAL 170
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
++ + +A++LF+ P ++V WT MV+G ++G V+EAR +FD MPE+N VSWNAMI+
Sbjct: 171 VRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMIS 230
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
GY + +D A +LF M +++ASWN MITG+ Q+ + A+ LFD+MP+ + ++W +
Sbjct: 231 GYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTM 290
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+ GY QS SE +L+LF M G R N+ F + C+NLA L G+Q+H + K F
Sbjct: 291 MNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPF 350
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ F+ + L+ +Y KCG + A F +KDVISWN MIA YA HG G +A+ L+E
Sbjct: 351 QFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEK 410
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ G KP+D+T VG+LSACSH+GLV++G F M +D + +HYTC++DL RAG
Sbjct: 411 MQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAG 470
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
RL +A+ L+ + EP + W ALLG C +G + + AA + E EP NAG Y LL N
Sbjct: 471 RLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCN 530
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
+YA++G+W + +K+R +M DRG+KK G SW+EV NKVH F D H E D I + L++
Sbjct: 531 IYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINSLLQD 590
Query: 678 L 678
+
Sbjct: 591 I 591
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 232/443 (52%), Gaps = 17/443 (3%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM-PRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D D+ W + + G A +F+ RR+ V++ A++SGY G++D A +F
Sbjct: 63 DRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFG 122
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+MP+R++VSWN M+ Y + + A LF MP RD SWN +L+ ++G D AR++
Sbjct: 123 RMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKL 182
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
FDRM E+N ++W ++A ++G + EA LF+ VVSWN+++ G+ + + +A
Sbjct: 183 FDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGYARNHMIDEAH 242
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+F +MP RD SWN MITG+ QN L AQ LF++ P ++V TWT M++GY+Q+ + +
Sbjct: 243 DLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSET 302
Query: 297 ARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG--- 349
A +F+ M N V++ + + +++ + M CK ++T I
Sbjct: 303 ALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQ-MICKTPFQFDTFIESTLM 361
Query: 350 --YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA+ GEI AR +F+ + D ISW +IA YA G +++ L+ +M+ G + N
Sbjct: 362 NLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDV 421
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC----KCGSVEEAYHA 463
+ +LS C++ ++ G ++ +VK A L+ C + G + H
Sbjct: 422 TYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHF 481
Query: 464 FEEIVDKDVISWNTMIAGYARHG 486
+ V+ WN ++ G HG
Sbjct: 482 LK--VEPSSTVWNALLGGCNSHG 502
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 218/408 (53%), Gaps = 16/408 (3%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
+P ++ W ++ + R G D A +F MP R+ VS+N M+ Y +G++ A
Sbjct: 91 RPDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACT 150
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+F+ MP RD SWN++++ VR+ ++ AR LF+ MP+R+V++W TM++G A++G + A
Sbjct: 151 LFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEA 210
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
R +FD M E+N +SWN +++ Y +N I+EA LF ++ SWN ++ GF++ K L
Sbjct: 211 RALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLE 270
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYV 289
A+ +FD+MP R+ V+W TM+ GY Q+ A +LF + + T+ V
Sbjct: 271 RAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACS 330
Query: 290 QNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+ E +MI + +T + ++ Y + + +AR++F K+V SWN
Sbjct: 331 NLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNG 390
Query: 346 MITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEM-KRY 400
MI YA G A +L+++M ++ + +++ +++ + SG ++ LR+F M K
Sbjct: 391 MIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDR 450
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ +T ++ C+ L K+L +KV E V NALL
Sbjct: 451 SIAVRDEHYTCLIDLCSRAGRLGDAKRLI-HFLKV--EPSSTVWNALL 495
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 51/261 (19%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N + A +G ++ AR LFDR P D +SW A++A YA G D+ LF R R
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALF---DRPDAR 95
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N +T++LS Y + G V+EA
Sbjct: 96 RNVVTWTALLSG-----------------------------------YARAGRVDEAEAL 120
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F + +++V+SWNTM+ Y G DA LF M +I +L+A +G +
Sbjct: 121 FGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNI----LLAALVRSGNI 176
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+K + F M N +T MV + R+G ++EA+ L MP E + +W A++
Sbjct: 177 DKARKLFDRMPE-----RNVMAWTTMVAGIARSGSVNEARALFDGMP-ERNVVSWNAMIS 230
Query: 584 ACRLYGKTELAEKAAEVIFEM 604
Y + + ++A ++ +M
Sbjct: 231 G---YARNHMIDEAHDLFMKM 248
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/540 (42%), Positives = 351/540 (65%)
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
++ +DV ++N + A+ G AAR++FD M ++ +SWN ++ Y +NG +E+
Sbjct: 39 IKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESK 98
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
LF VVSWNS++ G ++ +R+ +A F MP R+ SWN MI+G + + + E
Sbjct: 99 RLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEE 158
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A RLFEE P ++V ++TAMV GY + G++++AR +F+ MP+KN VSW MI+GYV+ +
Sbjct: 159 ASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKF 218
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
D A LFE M KN+ + MITGY + G+ A+ LFD++P D SW A+I GYAQ+G
Sbjct: 219 DEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNG 278
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
E++L+L +M + G + + S SVL+ C++LASL+ G++ H ++K G+E+ + N
Sbjct: 279 SGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICN 338
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MYCKCGS+ ++ AF +I DV+SWN MIA +ARHGF AL F M++ ++P
Sbjct: 339 ALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEP 398
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D IT + +LSAC H G V + +F SM Y ++ +H+ C+VD+L R G++++A +
Sbjct: 399 DGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKI 458
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
++ MPFE D WGALL AC ++ +L E AA+ I E+EP+N+G YV+LSN+YAA+G W
Sbjct: 459 IQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMW 518
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
G+V++VR MR++GVKK YSW+E+ NKVH F D HPE RI L+ ++ ++ D
Sbjct: 519 GEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELKGMKLQMIAD 578
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 244/470 (51%), Gaps = 20/470 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ +NV I R G +A VF+ MP R +VS+N++I+GY NG D ++++F MP
Sbjct: 46 DVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMP 105
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+++VSWN MI+G + ++ + A F+ MP+R+ SWN M+SG + + A R+F+
Sbjct: 106 TKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEE 165
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M +N IS+ ++ Y + G IE+A LF VVSW ++ G+V+ + +A+ +F
Sbjct: 166 MPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLF 225
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
++MP ++ V+ MITGY + +A+ LF++ P +D+ +W AM++GY QNG +EA
Sbjct: 226 EQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALK 285
Query: 300 IFDAM------PEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+ M P+ +T ++ + +A + ++ + + ++ ++ N +IT
Sbjct: 286 LHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVL--VLKSGYESRISICNALITM 343
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G I + F ++ D +SW A+IA +A+ G+ + +L F EM+ + F
Sbjct: 344 YCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITF 403
Query: 410 TSVLSTCANLASLELGKQLHGQLV---KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S+LS C + + ++ K+ F L+ + + G VE+AY +E
Sbjct: 404 LSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFA--CLVDILSRGGQVEKAYKIIQE 461
Query: 467 I-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ + D W ++A H K L + K V ++P + +LS
Sbjct: 462 MPFEADCGIWGALLAACHVHLNVK--LGELAAKKIVELEPQNSGAYVVLS 509
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 19/247 (7%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L RSP S++ T +Q H +K+ + N + + G++ A
Sbjct: 12 LPRSP--SIIRTIFLPIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQV 69
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+E+ +D +SWN++I GY ++G ++ LF M T + ++ +++ C +
Sbjct: 70 FDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNV----VSWNSMIAGCIEDERI 125
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
++ +YF +M + N+ + M+ L R R++EA L + MP + ++ A++
Sbjct: 126 DEAWQYFQAMPQR-----NTASWNAMISGLVRYDRVEEASRLFEEMP-RRNVISYTAMVD 179
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV--- 640
Y K E+A + M +N + ++ + Y +G++ + + +M D+ +
Sbjct: 180 G---YAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAM 236
Query: 641 -KKVTGY 646
+TGY
Sbjct: 237 TAMITGY 243
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 43/196 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D +I IT + + G D A +F+ +P R S+NAMI+GY NG + A ++ Q
Sbjct: 230 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 289
Query: 118 M-------PQRDLVS--------------------------------WNVMISGYVRNKS 138
M L+S N +I+ Y + S
Sbjct: 290 MLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGS 349
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ + F + DVVSWN M++ +A++G+ D A F M +E + I++ LL+A
Sbjct: 350 ILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSA 409
Query: 195 YVQNGRIEEACMLFES 210
G++ E+ F S
Sbjct: 410 CGHAGKVHESLNWFNS 425
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/534 (44%), Positives = 338/534 (63%), Gaps = 1/534 (0%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D +++I YA L A++LF +DV +W AM+ GYV++ ++ ARM+FD M
Sbjct: 229 DSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMV 288
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
++ +SWN MI GY ++D A+ LF+ M +N+ SWN+M+ G+ + G + A LF
Sbjct: 289 CRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSE 348
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
MP D +SW +++A YAQ G ++L LF +M+ G + + S+LS CA+L +L+ G
Sbjct: 349 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 408
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
LH + E VG AL+ MY KCG + A F + KDV++WNT+IAG A H
Sbjct: 409 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 468
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G K+A LF+ MK G++P+DIT V ILSACSH G+V++G + M+ YG+ P +H
Sbjct: 469 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEH 528
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y C++DLL RAG L+EA L+ MP EP+ + GALLG CR++G EL E + + ++
Sbjct: 529 YGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQ 588
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
P ++G Y+LLSN+YAA+ +W D KVR M+ G+ KV G S +E++ VH F GD H
Sbjct: 589 PCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSH 648
Query: 666 PEKDRIYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
PE ++IY L E+ +LK G+ T VL D+ EE+KEH L HSEKLA+AYG+L +
Sbjct: 649 PESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLD 708
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ IR++KNLRVC DCH+ IK ISK+ GR II+RD NRFHHF G CSC D+W
Sbjct: 709 SKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 189/371 (50%), Gaps = 20/371 (5%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
HV S S +++I Y L A+Q+F+ RD+VSWN MI GYV++ +
Sbjct: 220 HVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGH 279
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
AR +F+ M RDV+SWNTM++GYA G D A+R+FD M E+N +SWN +LA +V+ G +
Sbjct: 280 ARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNV 339
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGY 257
E+A LF +VVSWNS++ + + + +A +FD+M E + ++++
Sbjct: 340 EDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSAC 399
Query: 258 AQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
A L + L + + TA+V Y + GK+ A +F+AM K+ ++WN
Sbjct: 400 AHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWN 459
Query: 314 AMIAGYVQTKRMDMARELF----EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
+IAG + A++LF EA N ++ +++ + +G + + L D M
Sbjct: 460 TIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSS 519
Query: 370 DCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
I + +I A++G+ E+++ L M N S ++L C + EL
Sbjct: 520 YGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPM---EPNPSALGALLGGCRIHGNFEL 576
Query: 425 GKQLHGQLVKV 435
G+ + +L+ +
Sbjct: 577 GEMVGKRLINL 587
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 148/258 (57%), Gaps = 14/258 (5%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN I ++++ A VF+ M R +S+N MI+GY + G++D A+++FD+MP
Sbjct: 260 DVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMP 319
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+R+LVSWN M++G+V+ ++ A LF MP RDVVSWN+ML+ YAQ G + A +FD+
Sbjct: 320 ERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQ 379
Query: 180 M----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG-----FVKQK 230
M ++ E + LL+A G +++ L + N + NS++G + K
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLHL-HTYINDNRIEVNSIVGTALVDMYAKCG 438
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVS 286
++ A +F+ M +D ++WNT+I G A + + EAQ+LF+E V T+ A++S
Sbjct: 439 KISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 498
Query: 287 GYVQNGKVDEARMIFDAM 304
G VDE + + D M
Sbjct: 499 ACSHAGMVDEGQKLLDCM 516
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 18/266 (6%)
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ +A+ +F + + ++I + S ++L L+ M + G + + + V+
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C + G +H +VK GFE ++ ++L+ +Y + A F +DV+SW
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N MI GY +H A M+F+ M + D I+ +++ + G +++ F M
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRLFDEMPE 320
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
V NS M+ + G +++A L MP D +W ++L AC Y +
Sbjct: 321 RNLVSWNS-----MLAGFVKCGNVEDAFGLFSEMPCR-DVVSWNSML-AC--YAQCGKPN 371
Query: 596 KAAEVIFEM-----EPENAGMYVLLS 616
+A + +M +P A + LLS
Sbjct: 372 EALALFDQMRAVGVKPTEATVVSLLS 397
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/541 (46%), Positives = 353/541 (65%), Gaps = 10/541 (1%)
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
M R WN M++GY + +AQ LF+ P ++V TWTAMV+GY + ++ AR F
Sbjct: 69 MYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYF 128
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--TCKNVASWNTMITGYAQSGEITHA 359
D MPE++ VSWNAM++GY Q + A LF+ M +N +WN MI+ Y + G++ A
Sbjct: 129 DCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSA 188
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT--SVLSTCA 417
R LF+ MP + ++W ++IAGYAQ+G S ++ LF EM ++L T SV+S C
Sbjct: 189 RKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMIT-AKKLTPDEVTMVSVISACG 247
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+L +LELG + L + + NA++ MY +CGS+E+A F+E+ +DV+S+NT
Sbjct: 248 HLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNT 307
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I+G+A HG G +A+ L +MK GI+PD +T +G+L+ACSH GL+E+G + F S+
Sbjct: 308 LISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-- 365
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
P HY CMVDLLGR G L++A+ M+ MP EP A +G+LL A R++ + EL E A
Sbjct: 366 ---PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELA 422
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
A +FE+EP+N+G ++LLSN+YA++GRW DV ++R M+ GVKK TG+SW+E K+H
Sbjct: 423 ANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHK 482
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F V D H D IY L EL K+++ G++ VL DV EEEKE ++ HSEKLA+
Sbjct: 483 FIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAIC 542
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
Y +L AG IRV+KNLRVC DCH AIK ISK+ GR+II+RDNNRFH F+ G CSC DY
Sbjct: 543 YALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDY 602
Query: 778 W 778
W
Sbjct: 603 W 603
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 168/302 (55%), Gaps = 15/302 (4%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
R M R + WN M+SGY + +S A+ LF++MP+R+V++W M++GYA+ +
Sbjct: 63 RNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLE 122
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--KANWEVVSWNSLMGGFVKQ 229
AARR FD M E++ +SWN +L+ Y QNG EEA LF+ A V+WN+++ +++
Sbjct: 123 AARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRV 182
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAM 284
L A+ +F+ MP R+ V+WN+MI GYAQN A A LF+E D T ++
Sbjct: 183 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 242
Query: 285 VSGYVQNGKVDEARMIFDAMPE---KNTVSW-NAMIAGYVQTKRMDMARELFEAMTCKNV 340
+S G ++ + + E K ++S NAMI Y + M+ A+ +F+ M ++V
Sbjct: 243 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDV 302
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIE 396
S+NT+I+G+A G A NL M + D +++ ++ + +G E+ ++F
Sbjct: 303 VSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFES 362
Query: 397 MK 398
+K
Sbjct: 363 IK 364
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 209/425 (49%), Gaps = 34/425 (8%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
M R +NAM+SGY A+ +FD MP+R++++W M++GY + K L AAR F
Sbjct: 69 MYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYF 128
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE--KNEISWNGLLAAYVQNGRIEEA 204
+ MP+R VVSWN MLSGYAQNG A+ A R+FD ML +N ++WN +++AY++ G ++ A
Sbjct: 129 DCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSA 188
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQ 259
LF + VV+WNS++ G+ + + A +F M DEV+ ++I+
Sbjct: 189 RKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGH 248
Query: 260 NNYLAEAQ---RLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
L R E +K + AM+ Y + G +++A+ +F M ++ VS+N +
Sbjct: 249 LGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTL 308
Query: 316 IAGYVQ----TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
I+G+ + +++ + E + ++ ++T + +G + R +F+ +
Sbjct: 309 ISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAI 368
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL----ELGKQ 427
+A ++ + G ED+ KR ER+ P V + N + + ELG+
Sbjct: 369 DHYACMVDLLGRVGELEDA-------KRTMERMPMEPHAGVYGSLLNASRIHKQVELGEL 421
Query: 428 LHGQLVKVGFEAGCFVGNALLV--MYCKCG---SVEEAYHAFEEIVDKDVISWNTMIAGY 482
+L ++ + GN +L+ +Y G VE A ++ K W+ + G
Sbjct: 422 AANKLFELEPDNS---GNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGG 478
Query: 483 ARHGF 487
H F
Sbjct: 479 KLHKF 483
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 166/323 (51%), Gaps = 17/323 (5%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ WN ++ + + A +F+ MP R+ +++ AM++GY L+ AR+ FD MP+
Sbjct: 74 VADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPE 133
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMM--PKRDVVSWNTMLSGYAQNGYADAARRIFD 178
R +VSWN M+SGY +N A LF+ M R+ V+WN M+S Y + G D+AR++F+
Sbjct: 134 RSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFN 193
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLG 233
M +N ++WN ++A Y QNG+ A LF+ K + V+ S++ L
Sbjct: 194 TMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALE 253
Query: 234 DAKWIFDRMPVRDEVSW-----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
W+ R +++ N MI Y++ + +A+R+F+E +DV ++ ++SG+
Sbjct: 254 LGNWVV-RFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 312
Query: 289 VQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
+G EA + M E + V++ ++ ++ R++FE++ + +
Sbjct: 313 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYA 372
Query: 345 TMITGYAQSGEITHARNLFDRMP 367
M+ + GE+ A+ +RMP
Sbjct: 373 CMVDLLGRVGELEDAKRTMERMP 395
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYC--------------KCGSVEEAYHAFEEIVDK 470
G H ++K+G + FV NA++ MY K S +A F+ + ++
Sbjct: 44 GIGFHAHVLKLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPER 103
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
+VI+W M+ GYA+ + A F+ M + ++ +LS + GL E+ F
Sbjct: 104 NVITWTAMVTGYAKVKDLEAARRYFDCMPERSV----VSWNAMLSGYAQNGLAEEALRLF 159
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
M G NS + M+ R G LD A+ L MP + TW +++ G+
Sbjct: 160 DEM---LGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGR-NVVTWNSMIAGYAQNGQ 215
Query: 591 TELA-EKAAEVIF--EMEPENAGMYVLLS 616
+ +A E E+I ++ P+ M ++S
Sbjct: 216 SAMAIELFKEMITAKKLTPDEVTMVSVIS 244
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 279/765 (36%), Positives = 417/765 (54%), Gaps = 41/765 (5%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQL 108
P D + WN I ++ NG + L F M P + + G + + +
Sbjct: 86 PPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 109 DPARQVFDQMP--QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
+ ++ ++ N +++ Y R SLS AR +F+ MP DVVSWN+++ YA+
Sbjct: 146 GDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAK 205
Query: 167 NGYADAARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS--- 218
G A +F +M ++I+ +L G E++
Sbjct: 206 LGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMF 265
Query: 219 -WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---EAP 274
N L+ + K + +A +F MPV+D VSWN M+ GY+Q +A RLFE E
Sbjct: 266 VGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEK 325
Query: 275 VK-DVFTWTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+K DV TW+A +SGY Q G EA R + + + N V+ ++++G + +
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 330 EL------FEAMTCKNVAS-----WNTMITGYAQSGEITHARNLFDRMP--QHDCISWAA 376
E+ + KN N +I YA+ ++ AR +FD + + D ++W
Sbjct: 386 EIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTV 445
Query: 377 IIAGYAQSGYSEDSLRLFIEM--KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+I GY+Q G + +L L EM + R N + L CA+LA+L +GKQ+H ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALR 505
Query: 435 VGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
A FV N L+ MY KCG + +A F+ +++K+ ++W +++ GY HG+G++AL
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
+FE M+ +G K D +T++ +L ACSH+G++++G EYF M D+GV P +HY C+VDLL
Sbjct: 566 IFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLL 625
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GRAGRL+ A L++ MP EP W ALL CR++GK EL E AA+ I E+ N G Y
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYT 685
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LLSN+YA +GRW DV+++R MR +G+KK G SW+E TF VGD HP IY
Sbjct: 686 LLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ 745
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L + ++K G+V T LHDV +EEK+ +L HSEKLA+AYGIL+ P G IR+ K
Sbjct: 746 VLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITK 805
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLRVC DCH A ++S+I+ IILRD++RFHHF G CSC YW
Sbjct: 806 NLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 164/350 (46%), Gaps = 21/350 (6%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDC--ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+I+ Y G ++HA +L R P D W ++I Y +G + L F M
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ F V C ++S+ G H GF + FVGNAL+ MY +CGS+ +A
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F+E+ DV+SWN++I YA+ G K AL +F M G +PDDIT+V +L C+ G
Sbjct: 185 FDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT 244
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
G + F+ +I N C+VD+ + G +DEA + NMP + D +W A++
Sbjct: 245 RSLGKQ-FHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSWNAMV 302
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL----YAASGRWGDVSKVRLKMRDR 638
Y + E A + +M+ E M V+ + YA G + V +M
Sbjct: 303 AG---YSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 639 GVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
G+K +VT S L SVG +H ++ I+ Y + L+++G
Sbjct: 360 GIKPNEVTLISVLS-----GCASVGALMHGKE--IHCYAIKYPMDLRKNG 402
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 385/639 (60%), Gaps = 32/639 (5%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
MP+R++VSW M+SG +QN A R F M E+ ++ ++ AC
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIR------ACASL 54
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
S + + +L G + +G + + Y++ + +A +
Sbjct: 55 GSIEMGKQMHCLALKFGIGSELFVG-----------------SNLEDMYSKCGAMFDACK 97
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-PEKNTVSWNAM---IAGYVQTKR 324
+FEE P KD +WTAM+ GY + G+ +EA + F M E+ T+ + + + K
Sbjct: 98 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 157
Query: 325 MDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQ-HDCISWAAIIA 379
R + ++ ++ N + Y+++G++ A N+F + + +S+ +I
Sbjct: 158 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 217
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
GY ++ E L +F+E++R G N F+S++ CAN A+LE G QLH Q++K+ F+
Sbjct: 218 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 277
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
FV + L+ MY KCG +E+A AF+EI D I+WN++++ + +HG GKDA+ +FE M
Sbjct: 278 DPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMV 337
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
G+KP+ IT + +L+ CSH GLVE+G +YFYSM++ YGV+P +HY+C++DLLGRAGRL
Sbjct: 338 DRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRL 397
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
EA+ + MPFEP+A W + LGACR++G E+ + AAE + ++EP+N+G VLLSN+Y
Sbjct: 398 KEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIY 457
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A +W DV VR++MRD VKK+ GYSW++V K H F D HP K IY L+ L
Sbjct: 458 ANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLL 517
Query: 680 FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCE 739
++K G+V T V D+ + KE +L HSE++AVA+ ++S+P G+PI V KNLRVC
Sbjct: 518 DQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCV 577
Query: 740 DCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+AIK ISK+ GR II+RDN+RFHHF+ GSCSCGDYW
Sbjct: 578 DCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 163/368 (44%), Gaps = 33/368 (8%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAA 142
MP+R+ VS+ AMISG N + A + F M V S +R S+
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 143 RNLFEMMPKRDVVS----WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ + + K + S + + Y++ G A ++F+ M K+E+SW ++ Y +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 199 GRIEEACMLFESKANWEVV----SWNSLMG--GFVKQKRLGDA------KWIFDRMPVRD 246
G EEA + F+ + EV S +G G +K + G + K F+ D
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE----SD 176
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
N + Y++ + A +F ++ ++V ++T ++ GYV+ ++++ +F +
Sbjct: 177 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 236
Query: 306 ----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEIT 357
E N +++++I ++ +L + N + ++ Y + G +
Sbjct: 237 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 296
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A FD + I+W ++++ + Q G +D++++F M G + N F S+L+ C+
Sbjct: 297 QAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 356
Query: 418 NLASLELG 425
+ +E G
Sbjct: 357 HAGLVEEG 364
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 41/362 (11%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV-VSWNTMLSGY 164
G + A +VF++MP +D VSW MI GY + A F+ M +V + + + S
Sbjct: 90 GAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTL 149
Query: 165 AQNGYADAAR-------RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE-V 216
G A + + E + N L Y + G +E A +F + V
Sbjct: 150 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNV 209
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL--- 269
VS+ L+ G+V+ +++ +F + + +E +++++I A L + +L
Sbjct: 210 VSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 269
Query: 270 -----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
F+E P F + +V Y + G +++A FD + + ++WN++++ + Q
Sbjct: 270 VMKINFDEDP----FVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGL 325
Query: 325 MDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
A ++FE M + N ++ +++TG + +G + + F M + ++ G
Sbjct: 326 GKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT-----YGVVPG 380
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPF-------TSVLSTCANLASLELGKQLHGQLV 433
D L +K E +NR PF S L C E+GK +LV
Sbjct: 381 EEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLV 440
Query: 434 KV 435
K+
Sbjct: 441 KL 442
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/584 (42%), Positives = 350/584 (59%), Gaps = 40/584 (6%)
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------EEAPV------------- 275
A+ +FD +P D WNTMI Y + E+ LF E P+
Sbjct: 57 ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116
Query: 276 ---------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
D+F TA++ Y + G ++ AR I D M + V +N
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++A YV+ +++A +LF+ M +++ SWNTMI G+A G++ A+ LFDR + D ISW
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+++IA YA++ S ++LRLF EM+ ++ SVLS C ++ +L +GK +H + +
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIER 296
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
E +G +L+ MY KCG ++ + F + ++DV +W+ MI G A HGFG+ AL
Sbjct: 297 NRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDH 356
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F M + IKP+D+T +G+LSACSH GLV++G YF SM++ Y V P +HY C+VD+LG
Sbjct: 357 FSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILG 416
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAGRL EA L+K+MPF PDA W ALLGACR+Y E+AE+A + E+EP G YVL
Sbjct: 417 RAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVL 476
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
LSN+Y+ + W V VR M++ ++KV G S +EV N VH F GD HPE +I
Sbjct: 477 LSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRM 536
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
L E+ +LK +G+ T VL D E+EKE+ L +HSEKLA+A+G+LS G IR++KN
Sbjct: 537 LSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKN 596
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LRVC+DCH AIK IS+ R II+RD NRFHHF GSCSC DYW
Sbjct: 597 LRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 185/395 (46%), Gaps = 29/395 (7%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV---SWNTMLSGYAQN 167
AR VFD++P D WN MI Y+ +++ + +LF M ++ + S++ L A
Sbjct: 57 ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116
Query: 168 GYADAAR------RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
D ++ L + L+ Y + G IE A + + A+ ++V +N
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
L+ +V+ + A +FDRMP RD VSWNTMI G+A + A++LF+ +D+ +W
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236
Query: 282 TAMVSGYVQNGKVDEARMIF------DAMPEKNTVSWNAMIAGYVQTKRM-DMARELFEA 334
++M++ Y + + +EA +F + +P+K T+ G V M M E E
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIER 296
Query: 335 MTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ ++ +++ YA+ G+I ++ +F+ M D +W+A+I G A G+ E +L
Sbjct: 297 NRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDH 356
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA------GCFVGNAL 447
F +M + N F VLS C+++ ++ G + KV + GC V
Sbjct: 357 FSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVD--- 413
Query: 448 LVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
+ + G ++EA + + D I W ++
Sbjct: 414 --ILGRAGRLQEAMELIKSMPFAPDAIVWRALLGA 446
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 148/302 (49%), Gaps = 18/302 (5%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
A+I Y G ++ AR + D+M DLV +NV+++ YVR ++ A +LF+ MP+RD+VS
Sbjct: 145 ALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVS 204
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
WNTM+ G+A G A+++FDR E++ ISW+ ++AAY + + EA LF V
Sbjct: 205 WNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANV 264
Query: 217 ----VSWNSLMGGFVKQKRLGDAKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQR 268
V+ S++ LG K I +R + ++ T ++ YA+ + + R
Sbjct: 265 LPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLR 324
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKR 324
+F +DVF W+AM+ G +G + A F M + N V++ +++
Sbjct: 325 VFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGL 384
Query: 325 MDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
+D F +M+ + + ++ ++G + A L MP D I W A++
Sbjct: 385 VDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALL 444
Query: 379 AG 380
Sbjct: 445 GA 446
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 161/348 (46%), Gaps = 36/348 (10%)
Query: 11 HSSCI------LHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQW 64
H CI L Q+ RL+ P N ++ LK L S D+
Sbjct: 97 HQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQ-VLKIGLGS------------DLFVE 143
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
I + + G + A ++ + M V YN +++ Y+ G+++ A +FD+MP+RDLV
Sbjct: 144 TALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLV 203
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
SWN MI G+ + A+ LF+ +RD++SW++M++ YA+ ++ A R+F M N
Sbjct: 204 SWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLAN 263
Query: 185 ----EISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAK 236
+++ +L+A G + M+ E ++ ++ SL+ + K + ++
Sbjct: 264 VLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSL 323
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNG 292
+F+ M RD +W+ MI G A + + A F + +D+ T+ ++S G
Sbjct: 324 RVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIG 383
Query: 293 KVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM 335
VDE F +M + VS + ++ + R+ A EL ++M
Sbjct: 384 LVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSM 431
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 67/308 (21%)
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE--RLNRSP 408
+ + ++ +AR++FD +P D W +I Y S ++S+ LF +M R+ E ++
Sbjct: 49 SSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQM-RHQECIPIDSYS 107
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE---------- 458
+ V+ C L G++LH Q++K+G + FV AL+ MY K G +E
Sbjct: 108 LSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMA 167
Query: 459 ---------------------EAYHAFEEIVDKDVISWNTMIAGYARHG----------- 486
A+ F+ + ++D++SWNTMI G+A G
Sbjct: 168 HPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDR 227
Query: 487 ---------------FGK-----DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ K +AL LF M+ + PD +TMV +LSAC G + G
Sbjct: 228 TCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMG 287
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ R+ I + K T +VD+ + G +D + + M D W A++
Sbjct: 288 KMIHECIERNRIEI-DLKLGTSLVDMYAKCGDIDNSLRVFNGMN-NRDVFAWSAMIMGLA 345
Query: 587 LYGKTELA 594
+G ELA
Sbjct: 346 NHGFGELA 353
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 15/236 (6%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA---FEEIV 468
V+S N L Q+H ++K + FV LL C S + +A F+EI
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP-DDITMVGILSACSHTGLVEKGT 527
D WNTMI Y ++++ LF M+ P D ++ ++ AC L + G
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGR--LKDPGN 123
Query: 528 -EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ ++ G+ + T ++++ + G ++ A+N++ M PD + LL
Sbjct: 124 GQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMA-HPDLVPYNVLLAEYV 182
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
G+ LA +F+ PE V + + GDV + K+ DR ++
Sbjct: 183 RVGEINLAHD----LFDRMPERD--LVSWNTMIHGHASLGDVGTAK-KLFDRTCER 231
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 293/839 (34%), Positives = 456/839 (54%), Gaps = 124/839 (14%)
Query: 57 GDWDIR---QWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLD 109
GD +++ WN I+ + + G SA +F+SM R + ++ ++++ +
Sbjct: 164 GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC--SLTE 221
Query: 110 PARQVFDQM--------PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML 161
P ++ +Q+ DL + ++S + ++ SLS AR +F M R+ V+ N ++
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 162 SGYAQNGYADAARRIF---DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
G + + + A ++F + M++ + S+ LL+++ + EE + + + V++
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 219 W----------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
N L+ + K + DA+ +F M +D VSWN+MITG QN EA
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVE 401
Query: 269 LFEEAPVKDV----FT------------WT-----------------------AMVSGYV 289
++ D+ FT W A+++ Y
Sbjct: 402 RYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA 461
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC------------ 337
+ G ++E R IF +MPE + VSWN++I +++R L EA+ C
Sbjct: 462 ETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER-----SLPEAVVCFLNAQRAGQKLN 516
Query: 338 -----------------------------KNVA----SWNTMITGYAQSGEITHARNLFD 364
N+A + N +I Y + GE+ +F
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576
Query: 365 RMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
RM + D ++W ++I+GY + +L L M + G+RL+ + +VLS A++A+LE
Sbjct: 577 RMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLE 636
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G ++H V+ E+ VG+AL+ MY KCG ++ A F + ++ SWN+MI+GYA
Sbjct: 637 RGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYA 696
Query: 484 RHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
RHG G++AL LFE+MK G PD +T VG+LSACSH GL+E+G ++F SM+ YG+ P
Sbjct: 697 RHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR 756
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC-RLYG-KTELAEKAAEV 600
+H++CM D+LGRAG LD+ ++ ++ MP +P+ W +LGAC R G K EL +KAAE+
Sbjct: 757 IEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEM 816
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+F++EPENA YVLL N+YAA GRW D+ K R KM+D VKK GYSW+ +++ VH F
Sbjct: 817 LFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVA 876
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HP+ D IY L+EL K++ G+V T L+D+ +E KE +L YHSEKLAVA+ +
Sbjct: 877 GDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVL 936
Query: 721 LSIPAGR-PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ + PIR+MKNLRVC DCH+A K+ISKI GR IILRD+NRFHHF G+CSC D+W
Sbjct: 937 AAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 176/684 (25%), Positives = 289/684 (42%), Gaps = 145/684 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA------ 111
D D+ N I ++ G SA VF+ MP R+ VS+ ++SGY NG+ A
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 112 -------------------------------RQVFDQMPQR----DLVSWNVMISGYVRN 136
RQ+ M + D V NV+IS Y +
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 137 -KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGL 191
S+ A F + ++ VSWN+++S Y+Q G +A RIF M E ++ L
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 192 LAAYVQ----NGRIEEA--CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+ + R+ E C + +S ++ + L+ F K L A+ +F++M R
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLF---------------------------EEAPVKD- 277
+ V+ N ++ G + + EA +LF EE +K
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332
Query: 278 ----------------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
V +V+ Y + G + +AR +F M +K++VSWN+MI G Q
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 322 TKRMDMARELFEAM-----------------TCK----------------------NVAS 342
A E +++M +C NV+
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS-EDSLRLFIEMKRYG 401
N ++T YA++G + R +F MP+HD +SW +II A+S S +++ F+ +R G
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
++LNR F+SVLS ++L+ ELGKQ+HG +K NAL+ Y KCG ++
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 462 HAFEEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F + + +D ++WN+MI+GY + AL L M G + D +LSA +
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632
Query: 521 GLVEKGTEYFYSMNR---DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+E+G E R + V+ S +VD+ + GRLD A MP ++ +
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSA----LVDMYSKCGRLDYALRFFNTMPVR-NSYS 687
Query: 578 WGALLGACRLYGKTELAEKAAEVI 601
W +++ +G+ E A K E +
Sbjct: 688 WNSMISGYARHGQGEEALKLFETM 711
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 225/473 (47%), Gaps = 42/473 (8%)
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
L++ +DV N +++ Y + G + +AR++FD M +N +SW +++ Y +NG +EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMP---------VRDEVSWNTMI 254
+ + S ++ + +G +F R D V N +I
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 255 TGYAQN-NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNT 309
+ Y + + A F + VK+ +W +++S Y Q G A IF +M
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTC--------KNVASWNTMITGYAQSGEITHARN 361
++ +++ D+ L E + C ++ + +++ +A+SG +++AR
Sbjct: 207 YTFGSLVTTACSLTEPDV--RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL-------S 414
+F++M + ++ ++ G + + E++ +LF++M ++ SP + V+
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN---SMIDVSPESYVILLSSFPEY 321
Query: 415 TCANLASLELGKQLHGQLVKVG---FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+ A L+ G+++HG ++ G F G +GN L+ MY KCGS+ +A F + DKD
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVG--IGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
+SWN+MI G ++G +A+ ++SM+ I P T++ LS+C+ + G + +
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ-IH 438
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+ G+ N ++ L G L+E + + +MP E D +W +++GA
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 149/288 (51%), Gaps = 17/288 (5%)
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
K+V N +I Y ++G+ AR +FD MP +C+SWA I++GY+++G +++L +M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 398 KRYGERLNRSPFTSVLSTCANLASLEL--GKQLHGQLVKVGFEAGCFVGNALLVMYCKC- 454
+ G N+ F SVL C + S+ + G+Q+HG + K+ + V N L+ MY KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GSV A AF +I K+ +SWN++I+ Y++ G + A +F SM+ G +P + T ++
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 515 -SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
+ACS T + E + G++ + + +V ++G L A+ + M
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEM------EPENAGMYVLL 615
G ++G R + E+A ++ +M PE+ YV+L
Sbjct: 274 AVTLNGLMVGLVR----QKWGEEATKLFMDMNSMIDVSPES---YVIL 314
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 138/303 (45%), Gaps = 47/303 (15%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--- 324
RL++ KDV+ +++ Y++ G AR +FD MP +N VSW +++GY +
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 325 -----MDMARE-LFEAM--------TCKNVASW------------------------NTM 346
DM +E +F C+ + S N +
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 347 ITGYAQS-GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
I+ Y + G + +A F + + +SW +II+ Y+Q+G + R+F M+ G R
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 406 RSPFTSVLSTCANLA--SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
F S+++T +L + L +Q+ + K G FVG+ L+ + K GS+ A
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F ++ ++ ++ N ++ G R +G++A LF M + + + P+ + V +LS+ L
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSL 323
Query: 523 VEK 525
E+
Sbjct: 324 AEE 326
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
H +L K + ++ N L+ Y + G A F+E+ ++ +SW +++GY+R+G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
K+AL+ M GI + V +L AC G V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 274/752 (36%), Positives = 414/752 (55%), Gaps = 86/752 (11%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
AR V Q +S +++ Y +++ AR F+ + RDV +WN M+SGY + GY+
Sbjct: 75 ARLVVSNAIQNVCISAK-LVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYS 133
Query: 171 DAARRIFDRM-----LEKNEISWNGLLAAY--VQNGRIEEACMLFESKANWEVVSWNSLM 223
R F L+ + ++ +L A V +G + C+ + W+V SL+
Sbjct: 134 SEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGN-KIHCLALKFGFMWDVYVAASLI 192
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
+ + + +A+ +FD MP RD SWN MI+GY Q+ EA L + D T +
Sbjct: 193 HLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVS 252
Query: 284 MVSG-----------------------------------YVQNGKVDEARMIFDAMPEKN 308
++S Y + G + + + +FD M ++
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRD 312
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAM--------------------------TCKNVAS 342
+SWN++I Y ++ A LF+ M C++V
Sbjct: 313 LISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQG 372
Query: 343 W--------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+ N ++ YA+ G + AR +F+ +P D ISW II+GYAQ+G++
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFAS 432
Query: 389 DSLRLFIEMKRYGERL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+++ ++ M+ G + N+ + SVL C+ +L G +LHG+L+K G FVG +
Sbjct: 433 EAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTS 492
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L MY KCG +++A F +I + + WNT+IA + HG G+ A+MLF+ M G+KPD
Sbjct: 493 LADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 552
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT V +LSACSH+GLV++G F M DYG+ P+ KHY CMVDL GRAG+L+ A N +
Sbjct: 553 HITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFI 612
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
K+MP +PDA+ WGALL ACR++G +L + A+E +FE+EPE+ G +VLLSN+YA++G+W
Sbjct: 613 KSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWE 672
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
V ++R +G++K G+S +EV NKV F G+ HP + +Y L L KLK G
Sbjct: 673 GVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVG 732
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V + VL DV ++EKEH+L HSE+LA+A+ +++ PA IR+ KNLRVC DCH+ K
Sbjct: 733 YVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTK 792
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKI R II+RD+NRFHHF G CSCGDYW
Sbjct: 793 FISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
++ C NL S K LH +LV + L+ +YC G+V A + F+ I ++
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115
Query: 471 DVISWNTMIAGYARHGFGKDALMLFE-SMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
DV +WN MI+GY R G+ + + F M + G++PD T +L AC + V G +
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNK- 171
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL-GACR 586
+ + +G + + ++ L R G + A+ L MP D +W A++ G C+
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMISGYCQ 228
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/543 (45%), Positives = 353/543 (65%), Gaps = 17/543 (3%)
Query: 249 SWNTMITGYAQNNYLAEAQRLFEE------APVKDVF-----TWTAMVSGYVQNGK-VDE 296
SWN++I A++ EA R F P + F + +A++ + +G+ +
Sbjct: 43 SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD--LHSGRQAHQ 100
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
+IF P+ S A++ Y + + AR LF+ ++ +N+ SW +MITGY Q+ +
Sbjct: 101 QALIFGFEPDLFVSS--ALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 158
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLST 415
A +FD M + D ISW +IIA YAQ+G S +S+ +F M + GE N ++VL
Sbjct: 159 HRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA 218
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA+ S LGK +H Q++K+G E+ FVG +++ MYCKCG VE A AF+ + +K+V SW
Sbjct: 219 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 278
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+ M+AGY HG K+AL +F M G+KP+ IT V +L+ACSH GL+E+G +F +M+
Sbjct: 279 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSH 338
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
++ V P +HY CMVDLLGRAG L EA +L+K M PD WGALLGACR++ +L E
Sbjct: 339 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGE 398
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
+A +FE++P+N G YVLLSN+YA +GRW DV ++R+ M++ G+ K G+S ++++ +V
Sbjct: 399 ISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRV 458
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F VGD HP+ ++IY YLE+L KL++ G+V VLHDVG EEKE +LR HSEKLA
Sbjct: 459 HVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLA 518
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
VA+GI++ G I ++KNLRVC DCH AIK ISKIV R I++RD+ RFHHF G CSCG
Sbjct: 519 VAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCG 578
Query: 776 DYW 778
DYW
Sbjct: 579 DYW 581
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 180/366 (49%), Gaps = 32/366 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+A++ Y G+L AR +FD++ R++VSW MI+GYV+N A +F+ M +RDV+
Sbjct: 115 SALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVI 174
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN-----GLLAAYVQNGR------IEEA 204
SWN++++ YAQNG + + IF RM++ EI++N +L A +G I +
Sbjct: 175 SWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQ 234
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+ ++N V S++ + K ++ A+ FDRM ++ SW+ M+ GY + +
Sbjct: 235 VIKMGLESN--VFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAK 292
Query: 265 EAQRLFEE---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAM 315
EA +F E A VK + T+ ++++ G ++E F AM + V + M
Sbjct: 293 EALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCM 352
Query: 316 IAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGY-----AQSGEITHARNLFDRMPQH 369
+ + + A +L + M + + W ++ GEI+ AR LF+ P+
Sbjct: 353 VDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEIS-ARKLFELDPK- 410
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+C + + YA +G ED R+ I MK G L + P S++ + +G + H
Sbjct: 411 NCGYYVLLSNIYADAGRWEDVERMRILMKNSG--LVKPPGFSLVDIKGRVHVFLVGDREH 468
Query: 430 GQLVKV 435
Q K+
Sbjct: 469 PQHEKI 474
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 464 FEEIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F + VDK +V SWN++IA AR G +AL F SM+ + +KP+ T + +CS
Sbjct: 32 FNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD 91
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ G + + +G P+ + +VD+ + G L +A+ L + + +W +++
Sbjct: 92 LHSGRQA-HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR-NIVSWTSMI 149
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
Y + + A +A V M + + + +YA +G
Sbjct: 150 TG---YVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNG 187
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/497 (46%), Positives = 338/497 (68%), Gaps = 2/497 (0%)
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM-ARELFEAMTCKNV-A 341
M + +G VD++R +F+ MPE N +SW A+I YVQ+ D A ELF M +V
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNC 60
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N++I+ YA+SG + AR FD + + + +S+ AI+ GYA++ SE++ LF E+ G
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
++ F S+LS A++ ++ G+Q+HG+L+K G+++ + NAL+ MY +CG++E A+
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F E+ D++VISW +MI G+A+HGF AL +F M G KP++IT V +LSACSH G
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
++ +G ++F SM +++G++P +HY CMVDLLGR+G L EA + +MP DA W L
Sbjct: 241 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 300
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++G TEL AAE+I E EP++ Y+LLSNL+A++G+W DV K+R M++R +
Sbjct: 301 LGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 360
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G SW+EV+N+VH F VG+T HP+ +IY L++L K+K+ G++ T VLHD+ EE
Sbjct: 361 KEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEE 420
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
+KE L HSEK+AVA+G++S +PIR+ KNLRVC DCH AIK+IS GR I++RD+
Sbjct: 421 QKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDS 480
Query: 762 NRFHHFSGGSCSCGDYW 778
NRFHH G CSC DYW
Sbjct: 481 NRFHHIKNGVCSCNDYW 497
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 151/304 (49%), Gaps = 20/304 (6%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA-ARNLFEMMPKRDV-VSWNTMLS 162
+G +D +R+VF+QMP+ +++SW +I+ YV++ A LF M V N+++S
Sbjct: 8 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVGNSLIS 67
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VS 218
YA++G + AR+ FD + EKN +S+N ++ Y +N + EEA +LF A+ + +
Sbjct: 68 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 127
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ SL+ G +G + I R+ ++ N +I+ Y++ + A ++F E
Sbjct: 128 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 187
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARE 330
++V +WT+M++G+ ++G A +F M E N +++ A+++ + ++
Sbjct: 188 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247
Query: 331 LFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQS 384
F +M + + M+ +SG + A + MP D + W ++
Sbjct: 248 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 307
Query: 385 GYSE 388
G +E
Sbjct: 308 GNTE 311
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 133/260 (51%), Gaps = 21/260 (8%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR-----IEEACMLFESKANW 214
M + A +G D +R++F++M E N +SW ++ AYVQ+G IE C + + N
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVN- 59
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
NSL+ + + R+ DA+ FD + ++ VS+N ++ GYA+N EA LF E
Sbjct: 60 --CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 117
Query: 275 VKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMD 326
+ FT+ +++SG G + + I + + N NA+I+ Y + ++
Sbjct: 118 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 177
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYA 382
A ++F M +NV SW +MITG+A+ G T A +F +M + + I++ A+++ +
Sbjct: 178 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 237
Query: 383 QSGYSEDSLRLFIEM-KRYG 401
G + + F M K +G
Sbjct: 238 HVGMISEGQKHFNSMYKEHG 257
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 135/276 (48%), Gaps = 19/276 (6%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCD-SALHVFNSMPRRS-SVSYNAMISGYLLNG 106
SR + + ++ W IT ++++G CD A+ +F M S + N++IS Y +G
Sbjct: 14 SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVGNSLISMYARSG 73
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLS 162
+++ AR+ FD + +++LVS+N ++ GY +N A LF + + ++ ++LS
Sbjct: 74 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 133
Query: 163 GYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
G A G +I R+L + N+ N L++ Y + G IE A +F + V+S
Sbjct: 134 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 193
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLF---- 270
W S++ GF K A +F +M +E+++ +++ + ++E Q+ F
Sbjct: 194 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 253
Query: 271 -EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
E V + + MV ++G + EA ++MP
Sbjct: 254 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 289
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/639 (38%), Positives = 377/639 (58%), Gaps = 24/639 (3%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+RQ N ++ +R G +A +F+++P RS V++N++++ + AR FD MP
Sbjct: 36 VRQHNRSLVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPV 95
Query: 121 RDLVSWNVMISGYVRN---KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
RD++SWN ++S Y R+ L+AAR LF MP+RD VSW+T+L Y + G + A+R+F
Sbjct: 96 RDIISWNTLLSAYARSLQPNDLAAARRLFYEMPQRDAVSWSTLLGAYTRRGLMEEAQRLF 155
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK- 236
D M +N SWN ++ + G++ +A +F + + + S ++++ GF++ RL +A
Sbjct: 156 DEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADD 215
Query: 237 WIFDRMPVRDEV----SWNTMITGYAQNNYLAEAQRLFEEAPV--------------KDV 278
+ R+ V D ++NT+I Y Q + +A+RLF P ++V
Sbjct: 216 LLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNV 275
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+W +M+ Y++ G V AR +FD MP K+ VSWN MIAGY Q M+ A +LF +
Sbjct: 276 VSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPDP 335
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ +WN MI G+ Q G++ HAR FDRMP+ I+W +I+GY Q+ + +++LF M
Sbjct: 336 DAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRML 395
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
GER + +SVL+ CA+LA L LG QLH QL++ F NAL+ MY +CG +
Sbjct: 396 EVGERPDHHTLSSVLAACASLAMLRLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELI 454
Query: 459 EAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A F + +D++SWN +I GY + G +AL LFE M++ + P IT + +LSAC
Sbjct: 455 SAKAIFGHMHTQRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSAC 514
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+ GLV +G F++M DYG+ + +HY +V+L+GR G+L++A L+K+MP PD A
Sbjct: 515 GNAGLVSEGRVVFHTMVHDYGLAASVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAV 574
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
WGA LGAC LAE AA + +++P+++ YVL+ NL+A GRWG S VR M
Sbjct: 575 WGAFLGACTAKKNEPLAEMAANALSKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMER 634
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
G+ K GYSW+++ +KVH F GDT HP I++ LE
Sbjct: 635 LGIHKHPGYSWIDLHDKVHVFISGDTSHPLTHEIFSVLE 673
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 250/540 (46%), Gaps = 68/540 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D W+ + + R G + A +F+ MP R++ S+N MI+G+ GQ+ A VF MP
Sbjct: 131 DAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMP 190
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFE-----MMPKRDVVSWNTMLSGYAQNGYADAAR 174
+D S + M+SG++RN L A +L M + V ++NT+++ Y Q G AR
Sbjct: 191 DKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDAR 250
Query: 175 RIFD-------------RML-EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
R+F RM+ E+N +SWN ++ Y++ G + A LF+ + ++VSWN
Sbjct: 251 RLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWN 310
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+++ G+ + + +A+ +F +P D V+WN MI G+ Q + A+ F+ P + T
Sbjct: 311 TMIAGYTQASEMEEAEKLFWEVPDPDAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTIT 370
Query: 281 WTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWN-AMIAGYVQTKRMDMARELFE 333
W M+SGY QN D +F M P+ +T+S A A + +L E
Sbjct: 371 WNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTLSSVLAACASLAMLRLGAQLHQLIE 430
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDSLR 392
+ A+ N ++T Y++ GE+ A+ +F M Q D +SW A+I GY Q G + ++LR
Sbjct: 431 KSFLPDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALIGGYEQQGNATEALR 490
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF EM+ F S+LS C N + G+ V + ++ Y
Sbjct: 491 LFEEMRSAKVMPTHITFISLLSACGNAGLVSEGR---------------VVFHTMVHDYG 535
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
SVE Y A ++ RHG +DAL L +SM I PD
Sbjct: 536 LAASVEH-YAALVNLI--------------GRHGQLEDALELIKSMP---IAPDRAVWGA 577
Query: 513 ILSACS---HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
L AC+ + L E ++ D +S Y M +L GR A + ++M
Sbjct: 578 FLGACTAKKNEPLAEMAANALSKIDPD-----SSAPYVLMHNLHAHEGRWGSASLVREDM 632
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 51/259 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D WN+ I + G + A F+ MP RS++++N MISGY N D ++F +
Sbjct: 334 DPDAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQR 393
Query: 118 MPQ--------------------------------------RDLVSWNVMISGYVRNKSL 139
M + D + N +++ Y R L
Sbjct: 394 MLEVGERPDHHTLSSVLAACASLAMLRLGAQLHQLIEKSFLPDTATNNALMTMYSRCGEL 453
Query: 140 SAARNLF-EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+A+ +F M +RD+VSWN ++ GY Q G A A R+F+ M + I++ LL+A
Sbjct: 454 ISAKAIFGHMHTQRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSA 513
Query: 195 -----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
V GR+ M+ + V + +L+ + +L DA + MP+ D
Sbjct: 514 CGNAGLVSEGRVVFHTMVHDYGLAASVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRA 573
Query: 249 SWNTMITGYA--QNNYLAE 265
W + +N LAE
Sbjct: 574 VWGAFLGACTAKKNEPLAE 592
>gi|449433223|ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
gi|449487596|ref|XP_004157705.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 675
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/621 (39%), Positives = 369/621 (59%), Gaps = 34/621 (5%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N+ IS + NG ++ A+++FD MPQR++V+WN MI GY N S +LF MP+RDV
Sbjct: 50 NSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVF 109
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
S+NT++ G Q G D A+ IFD M ++ +SWN ++A ++NG +EEA LF+
Sbjct: 110 SYNTVIGGLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKN 169
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
V+SWN ++GG V +L A F +M RD VSW MI+G + L EA+ LF P
Sbjct: 170 VISWNLIIGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLDEARGLFNNMPT 229
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
KD W AM+ GY++NGK++ A +F MPE+N SWN ++ G+V ++R+D AR+LF M
Sbjct: 230 KDARVWNAMMVGYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFMEM 289
Query: 336 TCK-------------------------------NVASWNTMITGYAQSGEITHARNLFD 364
K N+ASW +I GY GE+ A +F+
Sbjct: 290 PDKCQKTWNNIVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFE 349
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
M D W A I G ++ E+ L+LF M R G L+++ FTS+L+ C++L +L+L
Sbjct: 350 SMQYKDTTVWNATIFGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQL 409
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G+Q H ++K GF V NA++ MY +CG+++ A+ F + D+DVISWN+MI G+A
Sbjct: 410 GRQTHALILKEGFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICGFAH 469
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HG G+DAL +FE M+ I+P+ IT +G+LSACSH GL++KG YF M + + P +
Sbjct: 470 HGNGEDALEMFEKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIE 529
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLGACRLYGKTELAEKAAEVI 601
HYTC+VDL GR G +DEA + + M E + WGALLGACR++ ++ A E +
Sbjct: 530 HYTCLVDLFGRFGLIDEALSFLAEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKV 589
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
E EP NAG+Y++L+ +Y +G+ + K+ +M++ GVKK G SW+EV N + F G
Sbjct: 590 LEKEPHNAGVYLILAEMYLRNGKRENAEKIFARMKNNGVKKQPGCSWIEVNNCGYVFLSG 649
Query: 662 DTLHPEKDRIYAYLEELEFKL 682
D +P DRI + ++ + ++
Sbjct: 650 DCSNPHFDRICSVVKLVNLEI 670
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 54/304 (17%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
T N+ N+ I+ ++G + A+ LFD MPQ + ++W A+I GY +G D + LF
Sbjct: 42 TFPNLKLLNSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLF- 100
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+R ER F N ++ +CG
Sbjct: 101 --RRMPER------------------------------------DVFSYNTVIGGLMQCG 122
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
V+ A F+ + +DV+SWN+MIAG R+G ++A+ LF+ M + ++ + G+++
Sbjct: 123 DVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLIIGGLVN 182
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
G ++ EYF M+R V +T M+ L RAGRLDEA+ L NMP DA
Sbjct: 183 C----GKLDSAGEYFGKMSRRDLV-----SWTIMISGLCRAGRLDEARGLFNNMP-TKDA 232
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLK 634
W A++ GK E+AE+ +F + PE N G + L N + S R D K+ ++
Sbjct: 233 RVWNAMMVGYIENGKIEMAEE----LFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFME 288
Query: 635 MRDR 638
M D+
Sbjct: 289 MPDK 292
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/623 (39%), Positives = 370/623 (59%), Gaps = 82/623 (13%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQ--- 290
+FD+MP R+ V+W MIT +AQ +A LF + V D FT+++++S +
Sbjct: 7 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66
Query: 291 -----------------------------------NGKVDEARMIFDAMPEKNTVSWNAM 315
+G VD++R +F+ MPE N +SW A+
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 316 IAGYVQTKRMDM-ARELFEAM-----------------TCKNVAS--------------- 342
I Y Q+ D A ELF M C N++
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 343 -------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N++I+ YA+SG + AR FD + + + +S+ AI+ GYA++ SE++ LF
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
E+ G ++ F S+LS A++ ++ G+Q+HG+L+K G+++ + NAL+ MY +CG
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
++E A+ F E+ D++VISW +MI G+A+HGF AL +F M G KP++IT V +LS
Sbjct: 307 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH G++ +G ++F SM +++G++P +HY CMVDLLGR+G L EA + +MP DA
Sbjct: 367 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 426
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W LLGACR++G TEL AAE+I E EP++ Y+LLSNL+A++G+W DV K+R M
Sbjct: 427 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 486
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
++R + K G SW+EV+N+VH F VG+T HP+ +IY L++L K+K+ G++ T VL
Sbjct: 487 KERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVL 546
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HD+ EE+KE L HSEK+AVA+G++S +PIR+ KNLRVC DCH AIK+IS GR
Sbjct: 547 HDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGRE 606
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I++RD+NRFHH G CSC DYW
Sbjct: 607 IVVRDSNRFHHIKNGVCSCNDYW 629
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 178/375 (47%), Gaps = 33/375 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV----SYNAMISGYLLNGQLDPARQVF 115
++ W + IT + GC A+ +F M V +Y++++S G L +Q+
Sbjct: 15 NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLH 74
Query: 116 DQMPQRDLV-------SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
++ + L S M + + S+ +R +FE MP+ +V+SW +++ YAQ+G
Sbjct: 75 SRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSG 134
Query: 169 YADA-ARRIFDRMLE----KNEISWNGLLAAY--VQNGRIEEACMLFESKANWEVVSW-- 219
D A +F +M+ N S++ +L A + + E + K V+
Sbjct: 135 ECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG 194
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV- 278
NSL+ + + R+ DA+ FD + ++ VS+N ++ GYA+N EA LF E +
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 254
Query: 279 ---FTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAREL 331
FT+ +++SG G + + I + + N NA+I+ Y + ++ A ++
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYS 387
F M +NV SW +MITG+A+ G T A +F +M + I++ A+++ + G
Sbjct: 315 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 374
Query: 388 EDSLRLFIEM-KRYG 401
+ + F M K +G
Sbjct: 375 SEGQKHFNSMYKEHG 389
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 58/342 (16%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNV---------------------MISGYVR------NK 137
+G +D +R+VF+QMP+ +++SW MISG++R +
Sbjct: 102 DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 161
Query: 138 SLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQNGYADAARRIFDRMLEKN 184
L A NL + V S+ N+++S YA++G + AR+ FD + EKN
Sbjct: 162 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 221
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFD 240
+S+N ++ Y +N + EEA +LF A+ + ++ SL+ G +G + I
Sbjct: 222 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 281
Query: 241 RMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
R+ ++ N +I+ Y++ + A ++F E ++V +WT+M++G+ ++G
Sbjct: 282 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 341
Query: 297 ARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMI 347
A +F M E N +++ A+++ + ++ F +M + + M+
Sbjct: 342 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 401
Query: 348 TGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
+SG + A + MP D + W ++ G +E
Sbjct: 402 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE 443
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 17/227 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N++IS Y +G+++ AR+ FD + +++LVS+N ++ GY +N A LF + +
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 254
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACML 207
++ ++LSG A G +I R+L + N+ N L++ Y + G IE A +
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYL 263
F + V+SW S++ GF K A +F +M +E+++ +++ + +
Sbjct: 315 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 374
Query: 264 AEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+E Q+ F E V + + MV ++G + EA ++MP
Sbjct: 375 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 54/299 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N I+ + R+G + A F+ + ++ VSYNA++ GY N + + A +F+++ +
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 254
Query: 124 --------------------------------------VSWNVMISGYVRNKSLSAARNL 145
N +IS Y R ++ AA +
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRI 201
F M R+V+SW +M++G+A++G+A A +F +MLE NEI++ +L+A G I
Sbjct: 315 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 374
Query: 202 EEACMLFESKANWEVV-----SWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMIT 255
E F S + + ++ + L +A + MP+ D + W T++
Sbjct: 375 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 434
Query: 256 G--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N L A+ + E+ P D + + + + G+ + I +M E+N +
Sbjct: 435 ACRVHGNTELGRHAAEMILEQEP-DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 492
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/645 (40%), Positives = 374/645 (57%), Gaps = 47/645 (7%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L+ + L+ YV+ IE+A LF+ ++V+W ++GG+ + + ++ +F+
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 241 RM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNG 292
+M V D+V+ T++ A+ + +A+ + + K DV TAM+ Y + G
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----------------- 335
V+ AR IFD M EKN +SW+AMIA Y + A +LF M
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 336 TCKNVASWN----------------------TMITGYAQSGEITHARNLFDRMPQHDCIS 373
C ++ + ++ Y + EI AR LFD+MP+ D ++
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +I GYA+ G + +SL LF +M+ G ++ +V+ CA L ++ + + +
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+ F+ +G A++ M+ KCG VE A F+ + +K+VISW+ MIA Y HG G+ AL
Sbjct: 361 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 420
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LF M GI P+ IT+V +L ACSH GLVE+G +F M DY V + KHYTC+VDLL
Sbjct: 421 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLL 480
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GRAGRLDEA L+++M E D WGA LGACR + LAEKAA + E++P+N G Y+
Sbjct: 481 GRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYI 540
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LLSN+YA +GRW DV+K R M R +KK+ G++W+EV NK H FSVGDT HP IY
Sbjct: 541 LLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYE 600
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L+ L KL+ G+V T VLHDV EE K +L HSEKLA+A+G+++ P PIR++K
Sbjct: 601 MLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIK 660
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLRVC DCH K +S I GR+II+RD NRFHHF G+CSCGDYW
Sbjct: 661 NLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 184/423 (43%), Gaps = 91/423 (21%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------P 150
A++ Y+ +++ AR +FD+M +RDLV+W VMI GY + + LFE M P
Sbjct: 70 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 129
Query: 151 KR---------------------------------DVVSWNTMLSGYAQNGYADAARRIF 177
+ DV+ M+ YA+ G ++AR IF
Sbjct: 130 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 189
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEAC----MLFESKANWEVVSWNSL----------- 222
DRM EKN ISW+ ++AAY +G+ +A M+ S + ++ SL
Sbjct: 190 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQ 249
Query: 223 MGGFV------------------------KQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
MG + K + + DA+++FD+MP RD V+W MI GYA
Sbjct: 250 MGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYA 309
Query: 259 QNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTV 310
+ E+ LF EE V D +V + G + +AR I D + K + +
Sbjct: 310 ECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI 369
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
AMI + + ++ ARE+F+ M KNV SW+ MI Y G+ A +LF M +
Sbjct: 370 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 429
Query: 371 C----ISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELG 425
I+ +++ + +G E+ LR F M + Y R + +T V+ L+
Sbjct: 430 ILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEA 489
Query: 426 KQL 428
+L
Sbjct: 490 LKL 492
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/544 (22%), Positives = 217/544 (39%), Gaps = 145/544 (26%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----N 184
++ YV+ + + AR LF+ M +RD+V+W M+ GYA+ G A+ + +F++M E+ +
Sbjct: 71 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 130
Query: 185 EISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+++ ++ A + G + +A ++ + K +V+ +++ + K + A+ IFD
Sbjct: 131 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 190
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA------PVK------------------ 276
RM ++ +SW+ MI Y + +A LF P K
Sbjct: 191 RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQM 250
Query: 277 ---------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
D F A+V Y + ++++AR +FD MPE++ V+W MI GY +
Sbjct: 251 GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAE 310
Query: 322 TKRMDMARELFEAM-----------------TCKNVASWN-------------------- 344
+ + LF+ M C + + +
Sbjct: 311 CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 370
Query: 345 --TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
MI +A+ G + AR +FDRM + + ISW+A+IA Y G +L LF M R G
Sbjct: 371 GTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 430
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
N+ S+L C++ G VEE
Sbjct: 431 LPNKITLVSLLYACSH-----------------------------------AGLVEEGLR 455
Query: 463 AFEEI-----VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
F + V DV + ++ R G +AL L ESM ++ D+ L AC
Sbjct: 456 FFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT---VEKDEGLWGAFLGAC 512
Query: 518 -SHTGLV--EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE--------AQNLM 566
+H +V EK + N HY + ++ AGR ++ +Q +
Sbjct: 513 RTHKDVVLAEKAATSLLELQPQ-----NPGHYILLSNIYANAGRWEDVAKTRDLMSQRRL 567
Query: 567 KNMP 570
K +P
Sbjct: 568 KKIP 571
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 129/253 (50%), Gaps = 17/253 (6%)
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
++ G+A+ G + F E+ R G R + V+ C +L +L++G+ +H + K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ FV AL+ MY KC +E+A F+++ ++D+++W MI GYA G ++L+LFE
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLL 553
M+ G+ PD + MV ++ AC+ G + K +Y VI T M+D+
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG----TAMIDMY 176
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY- 612
+ G ++ A+ + M E + +W A++ A YG KA + +F M ++GM
Sbjct: 177 AKCGCVESAREIFDRME-EKNVISWSAMIAA---YGYHGQGRKALD-LFRMML-SSGMLP 230
Query: 613 ---VLLSNLYAAS 622
L S LYA S
Sbjct: 231 DKITLASLLYACS 243
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 158/371 (42%), Gaps = 61/371 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ I + + GC +SA +F+ M ++ +S++AMI+ Y +GQ A +F M
Sbjct: 165 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMML 224
Query: 119 -----PQR---------------------------------DLVSWNVMISGYVRNKSLS 140
P + D ++ Y + + +
Sbjct: 225 SSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIE 284
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
AR LF+ MP+RD+V+W M+ GYA+ G A+ + +FD+M E+ ++++ ++ A
Sbjct: 285 DARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACA 344
Query: 197 QNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+ G + +A + + K +V+ +++ K + A+ IFDRM ++ +SW+
Sbjct: 345 KLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSA 404
Query: 253 MITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
MI Y + +A LF + + T +++ G V+E F M E
Sbjct: 405 MIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDY 464
Query: 309 TV-----SWNAMIAGYVQTKRMDMARELFEAMTC-KNVASWNTMITGYAQSGEITHAR-- 360
+V + ++ + R+D A +L E+MT K+ W + ++ A
Sbjct: 465 SVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKA 524
Query: 361 --NLFDRMPQH 369
+L + PQ+
Sbjct: 525 ATSLLELQPQN 535
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/777 (33%), Positives = 419/777 (53%), Gaps = 87/777 (11%)
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
F+ + R ++ +++S +G L AR +FDQMP +++ S N+++S Y + L AA+
Sbjct: 39 FDVLTYRLNLGLRSLLS----SGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQ 94
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN--GRI 201
+LF P R+ +W M+ +A G A +F ML + I + + V N G
Sbjct: 95 HLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIP-DRVTVTTVLNLPGCT 153
Query: 202 EEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+ F K + V N+L+ + K L A+ +F M +D V++N M+ G ++
Sbjct: 154 VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSK 213
Query: 260 NNYLAEAQRLF---------------------------------------EEAPVKDVFT 280
+A +LF V +VF
Sbjct: 214 EGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFV 273
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV-------------QTKRMDM 327
+++ Y + +D+ R +FD MPE++ VS+N +IA Y + +++
Sbjct: 274 NNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333
Query: 328 ARELFEAMTCKNVAS--------------------------WNTMITGYAQSGEITHARN 361
R++ T +VA N +I Y++ G + A++
Sbjct: 334 DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
F + ISW A+I GY Q+G E++L+LF +M+R G R +R+ F+S++ ++LA
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+ LG+QLH L++ G+++ F G+ L+ MY KCG ++EA F+E+ +++ ISWN +I+
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA +G K+A+ +FE M G PD +T + +L+ACSH GL ++ +YF+ M Y + P
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISP 573
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+HY C++D LGR G + Q ++ MPF+ D W ++L +CR++G ELA AA+ +
Sbjct: 574 WKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKL 633
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
F MEP +A YV+LSN+YA +G+W D + V+ MRDRGV+K +GYSW+E++ K+++F+
Sbjct: 634 FGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASN 693
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D P D I L+ L ++ + G+ LH V E K L+YHSE+LA+A+ ++
Sbjct: 694 DLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALM 753
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ PAG PIR+MKNL C DCH IK ISKIV R II+RD+ RFHHF G CSCGDYW
Sbjct: 754 NTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 18/337 (5%)
Query: 296 EARMI---FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+ARM+ FD + T N + + + + AR +F+ M KN+ S N +++ Y+
Sbjct: 31 DARMVKTGFDVL----TYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSS 86
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG++ A++LF P + +W ++ +A +G + D+L LF M G +R T+V
Sbjct: 87 SGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTV 146
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L NL + LH +K G + FV N LL YCK G + A F E+ DKD
Sbjct: 147 L----NLPGCTV-PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDA 201
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+++N M+ G ++ G AL LF +M+ GI T IL+ + + G +
Sbjct: 202 VTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHAL 261
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ R V+ N ++D + LD+ + L MP E D ++ ++ A Y +
Sbjct: 262 VLRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMP-ERDNVSYNVIIAA---YAWNQ 316
Query: 593 LAEKAAEVIFEMEPENAGMYVL-LSNLYAASGRWGDV 628
A + EM+ VL + + + +G DV
Sbjct: 317 CAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDV 353
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 62/359 (17%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRN 136
H +++ RS+ N ++ LL+ LD R++FD+MP+RD VS+NV+I+ Y N
Sbjct: 256 HQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWN 315
Query: 137 KSLSAARNLFEMMPK----RDVVSWNTMLS------------------------------ 162
+ + LF M K R V+ + TMLS
Sbjct: 316 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 375
Query: 163 -----GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKAN 213
Y++ G DAA+ F EK+ ISW L+ YVQNG+ EEA LF +
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVRDEV-SWNTMITGYAQNNYLAEAQRL 269
+ +++S++ +G + + R + V S + ++ YA+ L EA R
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRM 325
F+E P ++ +W A++S Y G+ A +F+ M ++V++ +++A
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 555
Query: 326 DMARELFEAMTCK-NVASWN----TMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
D + F M + +++ W +I + G + + + MP + D I W +I+
Sbjct: 556 DECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 18/258 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + G D+A F++ +S++S+ A+I+GY+ NGQ + A Q+F M + L
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435
Query: 125 SWNVMISGYVRNKS----LSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRI 176
S ++ S + R L + K V S + ++ YA+ G D A R
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVSWNSLMGGFVKQKRL 232
FD M E+N ISWN +++AY G + A +FE N + V++ S++
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 555
Query: 233 GDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVS 286
+ F M + +S + +I + ++ Q++ E P K D WT+++
Sbjct: 556 DECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILH 615
Query: 287 GYVQNGKVDEARMIFDAM 304
+G + AR+ D +
Sbjct: 616 SCRIHGNQELARVAADKL 633
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 23/281 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMIS--GYLLN---GQLDPARQV 114
+NV I + N C + L +F M + R + Y M+S G L + G+ A+ V
Sbjct: 305 YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 364
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+ DL+ N +I Y + L AA++ F ++ +SW +++GY QNG + A
Sbjct: 365 LLGLASEDLLG-NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEAL 423
Query: 175 RIFDRM----LEKNEISWNGLLAAYVQNGRI----EEACMLFESKANWEVVSWNSLMGGF 226
++F M L + +++ ++ A I + L S V S + L+ +
Sbjct: 424 QLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMY 483
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWT 282
K L +A FD MP R+ +SWN +I+ YA A ++FE D T+
Sbjct: 484 AKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFL 543
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQT 322
++++ NG DE F M + ++S W A + T
Sbjct: 544 SVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 23/266 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQMP 119
W IT +++NG + AL +F+ M R +++++I + RQ+ +
Sbjct: 406 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 120 ----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ + S +V++ Y + L A F+ MP+R+ +SWN ++S YA G A A +
Sbjct: 466 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIK 525
Query: 176 IFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQ- 229
+F+ ML + +++ +LAA NG +E F K + + W +
Sbjct: 526 MFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTL 585
Query: 230 KRLG---DAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEAPVKDVFTW 281
R+G + + MP + D + W +++ N LA A +LF P D +
Sbjct: 586 GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPT-DATPY 644
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEK 307
+ + Y + G+ ++A + M ++
Sbjct: 645 VILSNIYARAGQWEDAACVKKIMRDR 670
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/572 (42%), Positives = 351/572 (61%), Gaps = 17/572 (2%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+V N+LM + + L A+ +FD+M RD VSW+TMI Y LF
Sbjct: 143 DVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFS 193
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL--- 331
+ + +WTAM++GY++ ++E +F M E+N + + + + A +L
Sbjct: 194 QRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKR 253
Query: 332 FEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
A +N +A ++ Y + GEI AR +FD M D ++W A+I+ YAQ+
Sbjct: 254 LHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANC 313
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+ + +LF++M+ G R N S+LS CA +L++GK H + K G E + A
Sbjct: 314 IDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTA 373
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG + A F E +D+D+ +WN M+AGY HG+G+ AL LF M+T+G+KP+
Sbjct: 374 LIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPN 433
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
DIT +G L ACSH GLV +G F M D+G++P +HY CMVDLLGRAG LDEA ++
Sbjct: 434 DITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMI 493
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
++MP P+ A WGA+L AC+++ + + E AA + +EP+N G VL+SN+YAA+ RW
Sbjct: 494 ESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWN 553
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DV+ +R ++D G+KK G S +EV VH F +GDT HP ++I L E+ KLK+ G
Sbjct: 554 DVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAG 613
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
++ T +VLH++ EEEKE L YHSEKLA+A+G++S G PIRV+KNLR+C+DCH K
Sbjct: 614 YLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTK 673
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+SKI R+II+RD NRFHHF GSCSCG YW
Sbjct: 674 LLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 45/331 (13%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V DVF A++ Y + G + AR++FD M E++ VSW+ MI Y+ LF
Sbjct: 141 VSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYG 191
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+ +++ SW MI GY + ++ LF RM + +
Sbjct: 192 FSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFP--------------------- 230
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
N S++ +C + +++LGK+LH +++ GF + AL+ MY KC
Sbjct: 231 ----------NDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKC 280
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G + A F+ + +KDV++W MI+ YA+ A LF M+ G++P+++TMV +L
Sbjct: 281 GEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLL 340
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
S C+ G ++ G ++F++ GV + T ++D+ + G + AQ L + D
Sbjct: 341 SLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRD 398
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEME 605
TW ++ YG EKA ++ EME
Sbjct: 399 ICTWNVMMAG---YGMHGYGEKALKLFTEME 426
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 185/410 (45%), Gaps = 62/410 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA++ Y G L AR +FD+M +RD+VSW+ MI Y+ LF +R +V
Sbjct: 148 NALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYI---------TLFYGFSQRSIV 198
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLL-----AAYVQNGRIEEACM 206
SW M++GY + + R+F RM+E+ N+I+ L+ VQ G+ A +
Sbjct: 199 SWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYI 258
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
L + + +L+ + K + A+ IFD M +D ++W MI+ YAQ N + A
Sbjct: 259 L-RNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYA 317
Query: 267 QRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
+LF + V T +++S NG +D + F A +K V + ++ +T
Sbjct: 318 FQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKW-FHAYIDKQGVEVDVIL----KT 372
Query: 323 KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+DM YA+ G+I+ A+ LF D +W ++AGY
Sbjct: 373 ALIDM----------------------YAKCGDISGAQRLFSEAIDRDICTWNVMMAGYG 410
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGF---- 437
GY E +L+LF EM+ G + N F L C++ + GK L +++ G
Sbjct: 411 MHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKV 470
Query: 438 -EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
GC V + + G ++EAY E + V ++ W M+A H
Sbjct: 471 EHYGCMVD-----LLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 35/262 (13%)
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L + M++ ++ SVL C+ ++ +GK++HG VK G + FV NAL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR--HGFGKDALM-------------- 493
MY +CGS+ A F+++ ++DV+SW+TMI Y +GF + +++
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 494 ------LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHY 546
LF M + P+DITM+ ++ +C G V+ G + Y + +G+ +
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM--SLALA 270
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-- 604
T +VD+ G+ G + A+ + +M D TW A++ A Y + + A ++ +M
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA---YAQANCIDYAFQLFVQMRD 326
Query: 605 ---EPENAGMYVLLSNLYAASG 623
P M LLS L A +G
Sbjct: 327 NGVRPNELTMVSLLS-LCAVNG 347
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 43/351 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ W+ I ++ +F +RS VS+ AMI+GY+ L+ ++F +M
Sbjct: 174 DVVSWSTMIRAYIT---------LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMI 224
Query: 120 QR-----DLVSWNVMIS-GYV----RNKSLSA--ARNLFEMMPKRDVVSWNTMLSGYAQN 167
+ D+ +++IS G+V K L A RN F M + ++ Y +
Sbjct: 225 EENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM----SLALATALVDMYGKC 280
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLM 223
G +AR IFD M K+ ++W +++AY Q I+ A LF + V ++ SL+
Sbjct: 281 GEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLL 340
Query: 224 GGFVKQKRLGDAKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVF 279
L KW D+ V +V T +I YA+ ++ AQRLF EA +D+
Sbjct: 341 SLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDIC 400
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
TW M++GY +G ++A +F M + N +++ + + + LFE M
Sbjct: 401 TWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKM 460
Query: 336 T-----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAG 380
V + M+ ++G + A + + MP I+ W A++A
Sbjct: 461 IHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/765 (34%), Positives = 412/765 (53%), Gaps = 83/765 (10%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N + L +G L AR +FDQMP +++ S N+++S Y + L AA++LF P R+
Sbjct: 47 NLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNAT 106
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN--GRIEEACMLFESKAN 213
+W M+ +A G A +F ML + I + + V N G + F K
Sbjct: 107 TWTIMMRAHAAAGRTSDALSLFRAMLGEGVIP-DRVTVTTVLNLPGCTVPSLHPFAIKFG 165
Query: 214 WE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF- 270
+ V N+L+ + K L A+ +F M +D V++N M+ G ++ +A +LF
Sbjct: 166 LDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFA 225
Query: 271 --------------------------------------EEAPVKDVFTWTAMVSGYVQNG 292
V +VF +++ Y +
Sbjct: 226 AMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCD 285
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYV-------------QTKRMDMARELFEAMTCKN 339
+D+ R +FD MPE++ VS+N +IA Y + +++ R++ T +
Sbjct: 286 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 345
Query: 340 VAS--------------------------WNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
VA N +I Y++ G + A++ F + IS
Sbjct: 346 VAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAIS 405
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I GY Q+G E++L+LF +M+R G R +R+ F+S++ ++LA + LG+QLH L+
Sbjct: 406 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+ G+++ F G+ L+ MY KCG ++EA F+E+ +++ ISWN +I+ YA +G K+A+
Sbjct: 466 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIK 525
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
+FE M G PD +T + +L+ACSH GL ++ +YF+ M Y + P +HY C++D L
Sbjct: 526 MFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTL 585
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GR G + Q ++ MPF+ D W ++L +CR++G ELA AA+ +F MEP +A YV
Sbjct: 586 GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYV 645
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
+LSN+YA +G+W D + V+ MRDRGV+K +GYSW+E++ K+++F+ D P D I
Sbjct: 646 ILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKD 705
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L+ L ++ + G+ LH V E K L+YHSE+LA+A+ +++ PAG PIR+MK
Sbjct: 706 ELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMK 765
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NL C DCH IK ISKIV R II+RD+ RFHHF G CSCGDYW
Sbjct: 766 NLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 18/337 (5%)
Query: 296 EARMI---FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+ARM+ FD + T N + + + + AR +F+ M KN+ S N +++ Y+
Sbjct: 31 DARMVKTGFDVL----TYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSS 86
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG++ A++LF P + +W ++ +A +G + D+L LF M G +R T+V
Sbjct: 87 SGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTV 146
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L NL + LH +K G + FV N LL YCK G + A F E+ DKD
Sbjct: 147 L----NLPGCTV-PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDA 201
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+++N M+ G ++ G AL LF +M+ GI T IL+ + + G +
Sbjct: 202 VTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHAL 261
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ R V+ N ++D + LD+ + L MP E D ++ ++ A Y +
Sbjct: 262 VLRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMP-ERDNVSYNVIIAA---YAWNQ 316
Query: 593 LAEKAAEVIFEMEPENAGMYVL-LSNLYAASGRWGDV 628
A + EM+ VL + + + +G DV
Sbjct: 317 CAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDV 353
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 62/359 (17%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRN 136
H +++ RS+ N ++ LL+ LD R++FD+MP+RD VS+NV+I+ Y N
Sbjct: 256 HQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWN 315
Query: 137 KSLSAARNLFEMMPK----RDVVSWNTMLS------------------------------ 162
+ + LF M K R V+ + TMLS
Sbjct: 316 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 375
Query: 163 -----GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKAN 213
Y++ G DAA+ F EK+ ISW L+ YVQNG+ EEA LF +
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVRDEV-SWNTMITGYAQNNYLAEAQRL 269
+ +++S++ +G + + R + V S + ++ YA+ L EA R
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRM 325
F+E P ++ +W A++S Y G+ A +F+ M ++V++ +++A
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 555
Query: 326 DMARELFEAMTCK-NVASWN----TMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
D + F M + +++ W +I + G + + + MP + D I W +I+
Sbjct: 556 DECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 18/258 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + G D+A F++ +S++S+ A+I+GY+ NGQ + A Q+F M + L
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435
Query: 125 SWNVMISGYVRNKS----LSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRI 176
S ++ S + R L + K V S + ++ YA+ G D A R
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVSWNSLMGGFVKQKRL 232
FD M E+N ISWN +++AY G + A +FE N + V++ S++
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 555
Query: 233 GDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVS 286
+ F M + +S + +I + ++ Q++ E P K D WT+++
Sbjct: 556 DECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILH 615
Query: 287 GYVQNGKVDEARMIFDAM 304
+G + AR+ D +
Sbjct: 616 SCRIHGNQELARVAADKL 633
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 23/281 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMIS--GYLLN---GQLDPARQV 114
+NV I + N C + L +F M + R + Y M+S G L + G+ A+ V
Sbjct: 305 YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 364
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+ DL+ N +I Y + L AA++ F ++ +SW +++GY QNG + A
Sbjct: 365 LLGLASEDLLG-NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEAL 423
Query: 175 RIFDRM----LEKNEISWNGLLAAYVQNGRI----EEACMLFESKANWEVVSWNSLMGGF 226
++F M L + +++ ++ A I + L S V S + L+ +
Sbjct: 424 QLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMY 483
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWT 282
K L +A FD MP R+ +SWN +I+ YA A ++FE D T+
Sbjct: 484 AKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFL 543
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQT 322
++++ NG DE F M + ++S W A + T
Sbjct: 544 SVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 23/266 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQMP 119
W IT +++NG + AL +F+ M R +++++I + RQ+ +
Sbjct: 406 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 120 ----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ + S +V++ Y + L A F+ MP+R+ +SWN ++S YA G A A +
Sbjct: 466 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIK 525
Query: 176 IFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQ- 229
+F+ ML + +++ +LAA NG +E F K + + W +
Sbjct: 526 MFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTL 585
Query: 230 KRLG---DAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEAPVKDVFTW 281
R+G + + MP + D + W +++ N LA A +LF P D +
Sbjct: 586 GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPT-DATPY 644
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEK 307
+ + Y + G+ ++A + M ++
Sbjct: 645 VILSNIYARAGQWEDAACVKKIMRDR 670
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 285/839 (33%), Positives = 446/839 (53%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N+ I + +NG +SA VFN + + V++ AMISG NG + A +F M ++
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 124 -----------------------------VSW---------NVMISGYVRNKSLSAARNL 145
+ W N +++ Y R++ L +A +
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M RD VS+N+++SG Q G++D A +F +M L+ + I+ LL+A G +
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378
Query: 202 EEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ L ++ + +++ SL+ + K + A F + V WN M+ Y
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAY 438
Query: 258 AQNNYLAEAQRLFEEAPVK---------------------------------------DV 278
Q + L+++ +F + ++ +V
Sbjct: 439 GQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV 498
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--- 335
+ + ++ Y + G++ A I +PE + VSW AMIAGYVQ A +LFE M
Sbjct: 499 YVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYR 558
Query: 336 --------------TCKNVASW----------------------NTMITGYAQSGEITHA 359
C + + N +I+ YA+ G I A
Sbjct: 559 GIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEA 618
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F+++ + ISW ++++G AQSGY E++L++F+ M R +N + S +S A+L
Sbjct: 619 YLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASL 678
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++ G+Q+H ++K G+++ V N+L+ +Y K GS+ +A+ F ++ +++VISWN MI
Sbjct: 679 ANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMI 738
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
GY++HG G +AL LFE MK GI P+ +T VG+LSACSH GLV++G +YF SM + + +
Sbjct: 739 TGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDL 798
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P S+HY C+VDLLGRAG+LD A +K MP DA W LL AC ++ E+ E+AA
Sbjct: 799 VPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAH 858
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPE++ YVL+SN+YA S +W R M+D GVKK G SW+EV+N VH F
Sbjct: 859 HLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFY 918
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD LHP ++IY Y+ L + + G+V + +L++ + +K+ + HSEKLA+A+G
Sbjct: 919 AGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFG 978
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+ PIRVMKNLRVC DCHN IK++SKI R II+RD +RFHHF GG CSC D+W
Sbjct: 979 LLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 186/803 (23%), Positives = 322/803 (40%), Gaps = 193/803 (24%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
++++ Y +G A +VFD+ R + SWN MI +V KS LF M +
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 155 ---------------------------------------VSWNTMLSGYAQNGYADAARR 175
+ N ++ Y++NGY ++A++
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--------------------------- 208
+F+ + K+ ++W +++ QNG EEA +LF
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 209 ---ESKANWEVVSW---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ + V+ W N L+ + + ++L A+ IF M RD VS+N++I+G
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 257 YAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSG------------------------- 287
Q + A LF + D T +++S
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396
Query: 288 ----------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
Y + V+ A F +N V WN M+ Y Q + + E+F M
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456
Query: 336 ---------------TCK----------------------NVASWNTMITGYAQSGEITH 358
TC NV + +I YA+ G++
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLAL 516
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A + R+P+ D +SW A+IAGY Q ++L+LF EM+ G + + F S +S CA
Sbjct: 517 ALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+ +L G+Q+H Q GF A + NAL+ +Y +CG ++EAY AFE+I DK+ ISWN++
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSL 636
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
++G A+ G+ ++AL +F M + + T +SA + +++G + +SM G
Sbjct: 637 VSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTG 695
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ ++ L ++G + +A +M E + +W A++ Y + +A
Sbjct: 696 YDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITG---YSQHGCGMEAL 751
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ EM+ + ++ N G S + L VK+ G + E K+H
Sbjct: 752 RLFEEMK-----VCGIMPNHVTFVGVLSACSHIGL------VKE--GLDYFESMFKIHDL 798
Query: 659 --------SVGDTL--HPEKDRIYAYLEELEFKLKQDGFVYSTKL---VLH---DVGEEE 702
V D L + DR Y++E+ + D ++ T L V+H ++GE
Sbjct: 799 VPKSEHYVCVVDLLGRAGQLDRAMEYIKEM--PIPADAMIWRTLLSACVIHKNIEIGERA 856
Query: 703 KEHMLRYHSEKLAVAYGILSIPA 725
H+L E A I +I A
Sbjct: 857 AHHLLELEPEDSATYVLISNIYA 879
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 217/512 (42%), Gaps = 90/512 (17%)
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLG 233
+R + N ++ LL + +G + E C + +S + E + +SL+ + +
Sbjct: 51 ERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQH 110
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYA--QNNY--LAEAQRLFEEAPVKDVFTWTAMVSG-- 287
A +FD R SWN MI + ++N+ +R+ E + +T+ ++
Sbjct: 111 GAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV 170
Query: 288 ----------------------------------YVQNGKVDEARMIFDAMPEKNTVSWN 313
Y +NG ++ A+ +F+ + K+ V+W
Sbjct: 171 GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230
Query: 314 AMIAGYVQTKRMDMARELF-------------------------------EAMTCKNVAS 342
AMI+G Q + A LF E + C V
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL-VIK 289
Query: 343 W---------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
W N ++ Y++S ++ A +F M D +S+ ++I+G Q G+S+ +L L
Sbjct: 290 WGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALEL 349
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F +M+R + + S+LS CA++ +L G QLH +K G A + +LL +Y K
Sbjct: 350 FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK 409
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
C VE A+ F ++++ WN M+ Y + D+ +F M+ G+ P+ T I
Sbjct: 410 CADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L C+ G + G E ++ G N + ++D+ + G+L A +++ +P E
Sbjct: 470 LRTCTSLGALYLG-EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-ED 527
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEME 605
D +W A++ Y + ++ +A ++ EME
Sbjct: 528 DVVSWTAMIAG---YVQHDMFSEALQLFEEME 556
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 6/234 (2%)
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
++L M+ G R N + +L C SL +LH ++ K GF+ + ++L+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y + G A F+E ++ V SWN MI + LF M GI P+ T
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
G+L AC + + +S YG + ++DL + G ++ A+ + N
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF-NCI 221
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYAAS 622
D TW A++ G L E+A + +M YVL S L A++
Sbjct: 222 CMKDIVTWVAMISGLSQNG---LEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 43/194 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N I+ + R G A F + ++++S+N+++SG +G + A QVF +M
Sbjct: 598 DLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRML 657
Query: 119 ---PQRDLVSW-----------------------------------NVMISGYVRNKSLS 140
+ ++ ++ N +IS Y ++ S+S
Sbjct: 658 RTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSIS 717
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A F M +R+V+SWN M++GY+Q+G A R+F+ M + N +++ G+L+A
Sbjct: 718 DAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACS 777
Query: 197 QNGRIEEACMLFES 210
G ++E FES
Sbjct: 778 HIGLVKEGLDYFES 791
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/623 (39%), Positives = 370/623 (59%), Gaps = 82/623 (13%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQ--- 290
+FD+MP R+ V+W MIT +AQ +A LF + V D FT+++++S +
Sbjct: 12 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71
Query: 291 -----------------------------------NGKVDEARMIFDAMPEKNTVSWNAM 315
+G VD++R +F+ MPE N +SW A+
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 316 IAGYVQTKRMDM-ARELFEAM-----------------TCKNVAS--------------- 342
I Y Q+ D A ELF M C N++
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 343 -------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N++I+ YA+SG + AR FD + + + +S+ AI+ GYA++ SE++ LF
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
E+ G ++ F S+LS A++ ++ G+Q+HG+L+K G+++ + NAL+ MY +CG
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
++E A+ F E+ D++VISW +MI G+A+HGF AL +F M G KP++IT V +LS
Sbjct: 312 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH G++ +G ++F SM +++G++P +HY CMVDLLGR+G L EA + +MP DA
Sbjct: 372 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 431
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W LLGACR++G TEL AAE+I E EP++ Y+LLSNL+A++G+W DV K+R M
Sbjct: 432 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 491
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
++R + K G SW+EV+N+VH F VG+T HP+ +IY L++L K+K+ G++ T VL
Sbjct: 492 KERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVL 551
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HD+ EE+KE L HSEK+AVA+G++S +PIR+ KNLRVC DCH AIK+IS GR
Sbjct: 552 HDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGRE 611
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I++RD+NRFHH G CSC DYW
Sbjct: 612 IVVRDSNRFHHIKNGVCSCNDYW 634
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 175/375 (46%), Gaps = 33/375 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV----SYNAMISGYLLNGQLDPARQVF 115
++ W + IT + GC A+ +F M V +Y++++S G L +Q+
Sbjct: 20 NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLH 79
Query: 116 DQMPQRDLV-------SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
++ + L S M + + S+ +R +FE MP+ +V+SW +++ YAQ+G
Sbjct: 80 SRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSG 139
Query: 169 YADA-ARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN--- 220
D A +F +M+ N S++ +L A ++ + S N
Sbjct: 140 ECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG 199
Query: 221 -SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV- 278
SL+ + + R+ DA+ FD + ++ VS+N ++ GYA+N EA LF E +
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 259
Query: 279 ---FTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAREL 331
FT+ +++SG G + + I + + N NA+I+ Y + ++ A ++
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYS 387
F M +NV SW +MITG+A+ G T A +F +M + I++ A+++ + G
Sbjct: 320 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 379
Query: 388 EDSLRLFIEM-KRYG 401
+ + F M K +G
Sbjct: 380 SEGQKHFNSMYKEHG 394
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 58/342 (16%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNV---------------------MISGYVR------NK 137
+G +D +R+VF+QMP+ +++SW MISG++R +
Sbjct: 107 DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 166
Query: 138 SLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQNGYADAARRIFDRMLEKN 184
L A NL + V S+ N+++S YA++G + AR+ FD + EKN
Sbjct: 167 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 226
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFD 240
+S+N ++ Y +N + EEA +LF A+ + ++ SL+ G +G + I
Sbjct: 227 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 286
Query: 241 RMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
R+ ++ N +I+ Y++ + A ++F E ++V +WT+M++G+ ++G
Sbjct: 287 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 346
Query: 297 ARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMI 347
A +F M E N +++ A+++ + ++ F +M + + M+
Sbjct: 347 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 406
Query: 348 TGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
+SG + A + MP D + W ++ G +E
Sbjct: 407 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE 448
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 17/227 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N++IS Y +G+++ AR+ FD + +++LVS+N ++ GY +N A LF + +
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 259
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACML 207
++ ++LSG A G +I R+L + N+ N L++ Y + G IE A +
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYL 263
F + V+SW S++ GF K A +F +M +E+++ +++ + +
Sbjct: 320 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 379
Query: 264 AEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+E Q+ F E V + + MV ++G + EA ++MP
Sbjct: 380 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 54/299 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N I+ + R+G + A F+ + ++ VSYNA++ GY N + + A +F+++ +
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 259
Query: 124 --------------------------------------VSWNVMISGYVRNKSLSAARNL 145
N +IS Y R ++ AA +
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRI 201
F M R+V+SW +M++G+A++G+A A +F +MLE NEI++ +L+A G I
Sbjct: 320 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 379
Query: 202 EEACMLFESKANWEVV-----SWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMIT 255
E F S + + ++ + L +A + MP+ D + W T++
Sbjct: 380 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 439
Query: 256 G--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N L A+ + E+ P D + + + + G+ + I +M E+N +
Sbjct: 440 ACRVHGNTELGRHAAEMILEQEP-DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 497
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/739 (35%), Positives = 421/739 (56%), Gaps = 49/739 (6%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVFD 116
I WN+ I+ + +G ++++F M + +S ++++++ + +++ RQV
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 117 QMPQRDLVSWNV----MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+ + S+N +IS Y + + A+ LF+ + RDV+SWN+M+SGY +NG D
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335
Query: 173 ARRIFDRMLEKN-EISWNGLLAAYVQN--------GRIEEACMLFESKANWEVVSWNSLM 223
IF +ML +I ++ +V G++ + + + + EV N+L+
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVF 279
+ K L A +F+RM + VSW +MITGY + A +LF+E V DV+
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
T++++ NG + +++ D + E N + N+ ++
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRE-NNLETNSFVS---------------------- 492
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N + YA+ G + A ++F M + D ISW +I GY ++ ++L LF EM+R
Sbjct: 493 ----NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR 548
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
+ + + +L CA+LA+L+ G+++HG ++ G+ +V NA++ MY KCG +
Sbjct: 549 ES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVL 607
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F+ I +KD++SW MIAGY HG+G +A+ F M+ GI+PD+++ + IL ACSH
Sbjct: 608 ARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSH 667
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+GL+++G + F M ++ + PN +HY CMVDLL R G L +A +K MP +PDA WG
Sbjct: 668 SGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWG 727
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
ALL CR++ +LAEK AE IFE+EPEN G YVLL+N+YA + +W +V K+R K+ RG
Sbjct: 728 ALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRG 787
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
+KK G SW+E++ K++ F GD P+ +I L+ L K+K++G+ T L +
Sbjct: 788 LKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNAD 847
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
E EKE L HSEKLA+A+G+L++P G+ IRV KNLRVC DCH K +SK R IILR
Sbjct: 848 EREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILR 907
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D++RFHHF GSCSC YW
Sbjct: 908 DSSRFHHFKDGSCSCRGYW 926
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 246/530 (46%), Gaps = 72/530 (13%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACML 207
D+ ++ ++L A+ RR+ ++E + + +G+L YV+ G ++E M+
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRV-RSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMV 207
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM---------------------PVRD 246
F+ + ++ WN ++ + G++ +F +M R
Sbjct: 208 FDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARV 267
Query: 247 EV--------------SWNT----MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
E S+NT +I+ Y + AQ+LF+E +DV +W +M+SGY
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327
Query: 289 VQNGKVDEARMIFDAMPEKNT-VSWNAMIAGYVQTKRMDM--------ARELFEAMTCKN 339
V+NG D IF M + M+ +V + + + A +
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
V NT++ Y++ G++ A +F+RM + +SW ++I GY + G S+ +++LF EMK
Sbjct: 388 VRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKS 447
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G + TS+L+ CA +L+ GK +H + + E FV NAL MY KCGS+++
Sbjct: 448 RGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKD 507
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A+ F + KDVISWNTMI GY ++ +AL LF M+ KPD T+ IL AC+
Sbjct: 508 AHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACAS 566
Query: 520 TGLVEKGTE-YFYSMNRDYGVIPNSKHYT-CMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
++KG E + Y++ Y K+ T +VD+ + G L A++L +P D +
Sbjct: 567 LAALDKGREIHGYALRNGY---SEDKYVTNAVVDMYVKCGLLVLARSLFDMIP-NKDLVS 622
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAAS 622
W ++ YG +A +M EP+ +S LYA S
Sbjct: 623 WTVMIAG---YGMHGYGSEAINTFNQMRMTGIEPDEVS---FISILYACS 666
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 180/371 (48%), Gaps = 30/371 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS-SVSYNAMIS--------GYLLNGQL 108
D D+ WN I+ +++NG D + +F M + M++ G LL G++
Sbjct: 314 DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKV 373
Query: 109 DPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
+ + R++ N ++ Y + L++A +FE M ++ VVSW +M++GY + G
Sbjct: 374 LHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREG 433
Query: 169 YADAARRIFDRMLEKNEI----SWNGLLAAYVQNGRIEEACMLFE--SKANWEVVSW--N 220
+D A ++FD M + + + +L A NG ++ ++ + + N E S+ N
Sbjct: 434 LSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSN 493
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---D 277
+L + K + DA +F M +D +SWNTMI GY +N+ EA LF E + D
Sbjct: 494 ALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPD 553
Query: 278 VFTWTAMVSGYVQNGKVDEARMIF-----DAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
T ++ +D+ R I + E V+ NA++ YV+ + +AR LF
Sbjct: 554 GTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVT-NAVVDMYVKCGLLVLARSLF 612
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSE 388
+ + K++ SW MI GY G + A N F++M + D +S+ +I+ + SG +
Sbjct: 613 DMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLD 672
Query: 389 DSLRLFIEMKR 399
+ ++F MK+
Sbjct: 673 EGWKIFNIMKK 683
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 58/366 (15%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++R N + + + G +SA+ VF M ++ VS+ +MI+GY+ G D A ++FD+
Sbjct: 385 DREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDE 444
Query: 118 MPQRDLVS---------------------------------------WNVMISGYVRNKS 138
M R +V N + Y + S
Sbjct: 445 MKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGS 504
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA----- 193
+ A ++F M K+DV+SWNTM+ GY +N + A +F M +++ +
Sbjct: 505 MKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACILPAC 564
Query: 194 ---AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
A + GR L + + V+ N+++ +VK L A+ +FD +P +D VSW
Sbjct: 565 ASLAALDKGREIHGYALRNGYSEDKYVT-NAVVDMYVKCGLLVLARSLFDMIPNKDLVSW 623
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMP- 305
MI GY + Y +EA F + + D ++ +++ +G +DE IF+ M
Sbjct: 624 TVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKK 683
Query: 306 ----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHAR 360
E N + M+ +T + A + +AM K A+ W ++ G ++ A
Sbjct: 684 ECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAE 743
Query: 361 NLFDRM 366
+ +R+
Sbjct: 744 KVAERI 749
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 284/818 (34%), Positives = 429/818 (52%), Gaps = 99/818 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFN---SMPRRSSVSYNAMISGYLLNGQLDPAR-QVF 115
++ QWN ++ + RN + A+ +F+ S+ ++ G LD Q+
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 116 DQMPQR-DLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
M + DLVS N +I+ Y + + A +FE MP+R++VSWN+++ G+++NG+
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 171 DAARRIFDRMLEKNE------ISWNGLLAAYVQNGRIEEAC----MLFESKANWEVVSWN 220
+ F ML E + +L IE+ + + N E++ N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV-- 278
SL+ + K + L +A+ +FD+ ++ VSWN+MI GYA+ + L ++ +D
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303
Query: 279 ----------------------------FTW-----------TAMVSGYVQNGKVDEARM 299
++W A ++ Y + G + +
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----------------CKNVAS 342
+FD M K SWNA++ GY Q A +L+ MT C + S
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423
Query: 343 WN----------------------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ ++++ Y G+ A+ LFD M +SW +IAG
Sbjct: 424 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG 483
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Y+Q+G ++++ LF +M G + V C+ L++L LGK+LH +K
Sbjct: 484 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTED 543
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
FV ++++ MY K G + + F+ + +KDV SWN +IAGY HG GK+AL LFE M
Sbjct: 544 IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLR 603
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
+G+KPDD T GIL ACSH GLVE G EYF M + + P +HYTC+VD+LGRAGR+D
Sbjct: 604 LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRID 663
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
+A L++ MP +PD+ W +LL +CR++G L EK A + E+EPE YVL+SNL+A
Sbjct: 664 DALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 723
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
SG+W DV +VR +M+D G++K G SW+EV KVH F +GD + PE + + LE
Sbjct: 724 GSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEV 783
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
K+ G+ T VLHD+ EE+K +LR HSEKLA+++G+L+ G P+RV KNLR+C D
Sbjct: 784 KISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGD 843
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CHNA K ISK+V R I++RDN RFHHF G CSCGDYW
Sbjct: 844 CHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 173/341 (50%), Gaps = 29/341 (8%)
Query: 321 QTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
Q K +++ R L E ++ C + +IT Y+ G + +R +FD++ + + W
Sbjct: 10 QRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWN 69
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
AI++ Y ++ ED++ +F E+ E + + V+ CA L L LG+ +HG K
Sbjct: 70 AIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATK 129
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
+ + FVGNAL+ MY KCG VEEA FE + +++++SWN++I G++ +GF +++
Sbjct: 130 MDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNA 189
Query: 495 FESMKTVG---IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
F M VG PD T+V +L C+ +EKG + + G+ ++D
Sbjct: 190 FREM-LVGEESFVPDVATLVTVLPVCAGEEDIEKGMA-VHGLAVKLGLNEELMVNNSLID 247
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
+ + L EAQ L+ + + + +W +++G Y + E + ++ +M+ E+A M
Sbjct: 248 MYSKCRFLSEAQ-LLFDKNDKKNIVSWNSMIGG---YAREEDVCRTFYLLQKMQTEDAKM 303
Query: 612 ----YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
+ +L+ L R S++ + +K++ GYSW
Sbjct: 304 KADEFTILNVLPVCLER----SEL------QSLKELHGYSW 334
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 158/712 (22%), Positives = 280/712 (39%), Gaps = 142/712 (19%)
Query: 128 VMISGYVRNKSLSAARNLFEMMPK-----RDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
V++ + K + R L EM+ D V +++ Y+ G +R +FD++
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
KN LF+ WN+++ + + + DA IF +
Sbjct: 63 KN----------------------LFQ---------WNAIVSAYTRNELFEDAMSIFSEL 91
Query: 243 PV-----RDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGK 293
D + +I A L Q + A V DVF A+++ Y + G
Sbjct: 92 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 151
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT------CKNVASW---- 343
V+EA +F+ MPE+N VSWN++I G+ + + + F M +VA+
Sbjct: 152 VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211
Query: 344 -------------------------------NTMITGYAQSGEITHARNLFDRMPQHDCI 372
N++I Y++ ++ A+ LFD+ + + +
Sbjct: 212 PVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIV 271
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHG 430
SW ++I GYA+ + L +M+ ++ FT +VL C + L+ K+LHG
Sbjct: 272 SWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHG 331
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+ G ++ V NA + Y +CG++ + F+ + K V SWN ++ GYA++ +
Sbjct: 332 YSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRK 391
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPN------S 543
AL L+ M G+ PD T+ +L ACS + G E + +++ V P S
Sbjct: 392 ALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLS 451
Query: 544 KHYTC-----------------------MVDLLGRAGRLDEAQNLMKNM---PFEPDAAT 577
+ C M+ + G DEA NL + M +P
Sbjct: 452 LYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 511
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEME-PENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+ GAC L ++ + E+ + + ++YA G G ++ ++R
Sbjct: 512 IMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR 571
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE-KDRIYAYLEELEFKLKQDGFVYSTKLV- 694
++ V SW + G +H K+ + + + L LK D F ++ L+
Sbjct: 572 EKDVA-----SW-------NVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 619
Query: 695 -----LHDVGEEEKEHMLRYHS-EKLAVAYGILSIPAGRPIRVMKNLRVCED 740
L + G E ML H+ E Y + GR R+ LR+ E+
Sbjct: 620 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEE 671
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/806 (33%), Positives = 423/806 (52%), Gaps = 107/806 (13%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL--------------------- 103
NV + + + G A+ +F MP R S+N ++SGY
Sbjct: 95 NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 154
Query: 104 ---------------------LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
L QL Q FD ++ + ++ +VR ++ A
Sbjct: 155 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAA--ALVDMFVRCGAVDLA 212
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
LF + + + N+ML+GY + D A +FD M E++ +SWN +++A Q+GR+
Sbjct: 213 SRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVR 272
Query: 203 EAC-MLFESKANWEVVSWNSLMGGFVKQKRLGDAKW-------IFDRMPVRDEVSWNTMI 254
EA M+ + ++ + + RL +W + +P D + ++
Sbjct: 273 EALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALV 332
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE-------- 306
YA++ EA+ +F ++ WT ++SG++Q G E+ +F+ M
Sbjct: 333 ELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQF 392
Query: 307 -------------------------------KNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+ V N++I+ Y + + A +F M
Sbjct: 393 ALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFM 452
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF- 394
K++ SW +MIT Y+Q G + AR FD M + + I+W A++ Y Q G ED LR++
Sbjct: 453 NEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYK 512
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+ + R + + ++ CA+L + +LG Q+ G+ VKVG V NA++ MY KC
Sbjct: 513 VMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKC 572
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G + EA F+ + KD++SWN MI GY++HG GK A+ +F+ + G KPD I+ V +L
Sbjct: 573 GRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVL 632
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
S CSH+GLV++G YF M R + + P +H++CMVDLLGRAG L EA++L+ +MP +P
Sbjct: 633 SGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPT 692
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
A WGALL AC+++G ELAE AA+ +FE++ ++G Y+L++ +YA +G+ D +++R
Sbjct: 693 AEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKL 752
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY--STK 692
MRD+G+KK GYSW+EV NKVH F D HP+ I L+EL K+ + G+V ST+
Sbjct: 753 MRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTR 812
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
+H HSEKLAVA+G++++P PI +MKNLR+C DCH IK IS +
Sbjct: 813 SEIH-------------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVT 859
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
GR ++RD RFHHF+GGSCSCGDYW
Sbjct: 860 GREFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 190/403 (47%), Gaps = 38/403 (9%)
Query: 19 HTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPA----GDWDIRQWNVAITTHMRN 74
H Q I L + +PY + ++ + S + K D + W V I+ ++
Sbjct: 313 HAQVIRNL---PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQY 369
Query: 75 GCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQMPQ----RDLVSW 126
GC ++ +FN M + +ISG L RQ+ + + +V
Sbjct: 370 GCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS 429
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N +IS Y + +L +A +F M ++D+VSW +M++ Y+Q G AR FD M EKN I
Sbjct: 430 NSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 489
Query: 187 SWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVSWNSLMGGF--VKQKRLGDAKWIF 239
+WN +L AY+Q+G E+ ML E + V++ +L G + +LGD I
Sbjct: 490 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQ--II 547
Query: 240 DRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
R + D N +IT Y++ + EA+++F+ VKD+ +W AM++GY Q+G
Sbjct: 548 GRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGK 607
Query: 296 EARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTM 346
+A IFD + ++ +S+ A+++G + + + F+ M + ++ M
Sbjct: 608 QAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCM 667
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAGYAQSGYSE 388
+ ++G +T A++L D MP W A+++ G +E
Sbjct: 668 VDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNE 710
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 313 NAMIAGYVQTKRM-DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
N ++ Y+ + D R L + NV + N M+ GYA+ G ++ A LF RMP D
Sbjct: 63 NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 122
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHG 430
SW +++GY QS SL F+ M R G+ N + +C L L QL
Sbjct: 123 ASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLA 182
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGS-------------------------------VEE 459
+ K + V AL+ M+ +CG+ V+
Sbjct: 183 MVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDH 242
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F+ + ++DV+SWN M++ ++ G ++AL + M++ G++ D T L+AC+
Sbjct: 243 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 302
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHY--TCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+ G + + R+ +P+ Y + +V+L ++G EA+ + ++ + A
Sbjct: 303 LSSLRWGKQLHAQVIRN---LPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA- 358
Query: 578 WGALLGACRLYG 589
W L+ YG
Sbjct: 359 WTVLISGFLQYG 370
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 154/359 (42%), Gaps = 72/359 (20%)
Query: 8 RQLHSSCILHQHTQSI---NRLQSP-ANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQ 63
RQLHS C+ Q++ N L S A + S + + R +N K DI
Sbjct: 411 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK-----------DIVS 459
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W IT + + G A F+ M ++ +++NAM+ Y+ +G + +++ M +
Sbjct: 460 WTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEY 519
Query: 124 V--SW--------------------------------------NVMISGYVRNKSLSAAR 143
V W N +I+ Y + + AR
Sbjct: 520 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEAR 579
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNG 199
+F+ + +D+VSWN M++GY+Q+G A IFD +L++ + IS+ +L+ +G
Sbjct: 580 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 639
Query: 200 RIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTM 253
++E F+ +S ++ ++ + L +AK + D MP++ W +
Sbjct: 640 LVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGAL 699
Query: 254 ITG--YAQNNYLAE--AQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
++ NN LAE A+ +FE ++P D ++ M Y GK D++ I M +K
Sbjct: 700 LSACKIHGNNELAELAAKHVFELDSP--DSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 756
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 118/300 (39%), Gaps = 46/300 (15%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH-AFEEI 467
F L +C +L + LHG+LV VG + F+ N LL Y CG++ +A +I
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+VI+ N M+ GYA+ G DA+ LF M + + M G S LV
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQ--SRQYLVS--L 142
Query: 528 EYFYSMNRDYGVIPNSKHYTC-----------------------------------MVDL 552
E F SM+R PN+ C +VD+
Sbjct: 143 ETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDM 202
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
R G +D A L + EP ++L Y KT + A E+ M + +
Sbjct: 203 FVRCGAVDLASRLFVRIK-EPTMFCRNSMLAG---YVKTYGVDHALELFDSMPERDVVSW 258
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
++ + + SGR + + + M+ +GV+ T S L ++ + G LH + R
Sbjct: 259 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 318
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 280/766 (36%), Positives = 424/766 (55%), Gaps = 62/766 (8%)
Query: 75 GCCDS---ALHVFNSMP--RRSSVSYNAMISGYLLNGQ---------------------- 107
G CDS A VF SM +R+ VS+NAMI+ Y NG
Sbjct: 53 GKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVT 112
Query: 108 ----------LDPARQVFDQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRD 153
L R++ +++ L S+ N +++ Y R S+ A+ +F+ + RD
Sbjct: 113 FVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRD 172
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM---LEKNEISWNGLLAAYVQNGRIEEA----CM 206
SWN ++ ++Q+G A RIF M ++ N ++ +++ + + E
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAE 232
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ + + ++V +L+ + K +A+ +FD+M RD VSWN MI Y N EA
Sbjct: 233 IVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEA 292
Query: 267 QRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAG 318
L++ E + T+ +++ + + R++ + E+ S A++
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG---EITHARNLFDRMPQHDCISWA 375
Y + ++ AR++F AM ++ +W+T+I YA +G + AR +FDR+ D ISW
Sbjct: 353 YAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWN 412
Query: 376 AIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
A+I Y Q+G + ++++F EM G + + F +VL CA+L L K LH Q+ +
Sbjct: 413 AMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISE 472
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
E+ V N L+ MY +CGS+EEA F +K V+SW M+A ++++G +AL L
Sbjct: 473 SELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDL 532
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F+ M G+KPDD+T IL C+H G +E+G YF M + + P + H+ MVDLLG
Sbjct: 533 FQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLG 592
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
R+GRL +A+ L+++MPFEPD W L ACR++GK EL E AAE ++E++P + Y+
Sbjct: 593 RSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIA 652
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
+SN+YAA G W V+ VR KM +RG+KK+ G S++EV K+H FS G HP D I
Sbjct: 653 MSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEE 712
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI-PAGRPIRVMK 733
L L ++ G+V TK VLHDV E EKE ML YHSEK+A+A+G++S +G PIRV+K
Sbjct: 713 LTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVK 772
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG-GSCSCGDYW 778
NLRVC DCH A K I++I GR II+RD NRFH FS G CSCGDYW
Sbjct: 773 NLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 19/191 (9%)
Query: 404 LNRSP----FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
++R P F +VL +C++ + G+ LH ++ FE VGNAL+ MY KC S+ +
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 460 AYHAFEEI--VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A FE + ++V+SWN MIA YA++G +AL+L+ M G+ D +T V +L AC
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 518 SHTGLVEKGTE----YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
S + +G E FYS + + N+ +V + R G + +A+ + +++
Sbjct: 121 SS---LAQGREIHNRVFYSGLDSFQSLANA-----LVTMYARFGSVGDAKRMFQSLQTR- 171
Query: 574 DAATWGALLGA 584
D +W A++ A
Sbjct: 172 DETSWNAVILA 182
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMP-----RRSSVSYNAMISGY 102
K+R G D WN ITT+++NGC +A+ +F M + +V++ A++
Sbjct: 395 KARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454
Query: 103 LLNGQLDPARQVFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
G+L + + Q+ + +L V N +I+ Y R SL A LF ++ VVSW
Sbjct: 455 ASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWT 514
Query: 159 TMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
M++ ++Q G A +F M ++ +++++ +L G +E+ F A
Sbjct: 515 AMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL 574
Query: 215 EVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYL----A 264
++ + +++ + RL DAK + + MP D V+W T +T + L A
Sbjct: 575 HALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEA 634
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
A+R++E P + AM + Y +G ++ + M E+
Sbjct: 635 AAERVYELDP-SSTAPYIAMSNIYAAHGMWEKVASVRKKMEER 676
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/726 (37%), Positives = 404/726 (55%), Gaps = 72/726 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQR---DLVSWNVMISGYVRNKSLSAARNLFEMMP-- 150
NA+++ Y G L+ A +FD++ QR D++SWN ++S +V++ + A +LF M
Sbjct: 49 NALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI 108
Query: 151 --------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
+ D++S +L + + E+ N ++NG
Sbjct: 109 VHEKPTNERSDIISIVNILPACGS----------LKAVPQTKEVHGNA-----IRNGTF- 152
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
+V N+L+ + K + +A +F+ M +D VSWN M+ GY+Q+
Sbjct: 153 -----------LDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGN 201
Query: 263 LAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWN 313
A LF E P+ D+ TWTA+++GY Q G EA +F M N V+
Sbjct: 202 FKAAFELFKNMRKENIPL-DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTII 260
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKN---------------VASWNTMITGYAQSGEITH 358
++++ E+ A + KN + +N +I Y++
Sbjct: 261 SVLSACASLGAFSQGMEI-HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKA 319
Query: 359 ARNLFDRMP--QHDCISWAAIIAGYAQSGYSEDSLRLFIEM--KRYGERLNRSPFTSVLS 414
AR++FD +P + + ++W +I G+AQ G S D+L+LF+EM + YG N + +L
Sbjct: 320 ARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILM 379
Query: 415 TCANLASLELGKQLHGQLVKVGF--EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
CA+LA++ +GKQ+H +++ + FV N L+ MY KCG V+ A H F+ + K
Sbjct: 380 ACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSA 439
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
ISW +M+ GY HG G +AL +F+ M+ G PDDIT + +L ACSH G+V++G YF S
Sbjct: 440 ISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDS 499
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M+ DYG+ P ++HY +DLL R GRLD+A +K+MP EP A W ALL ACR++ E
Sbjct: 500 MSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVE 559
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
LAE A + EM EN G Y L+SN+YA +GRW DV+++R M+ G+KK G SW++ Q
Sbjct: 560 LAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQ 619
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
+F VGD HP +IYA LE L ++K G+V T LHDV EEEK ++L HSE
Sbjct: 620 KGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSE 679
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLA+AYG+L+ G PIR+ KNLRVC DCH+A +ISKIV I++RD +RFHHF GSC
Sbjct: 680 KLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSC 739
Query: 773 SCGDYW 778
SCG YW
Sbjct: 740 SCGGYW 745
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 206/447 (46%), Gaps = 70/447 (15%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFE---SKANWEVVSWNSLMGGFVKQKRLGDAKW 237
E N N L+A Y + G +EEA M+F+ + +V+SWNS++ VK A
Sbjct: 41 FESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 100
Query: 238 IFDRMPV----------RDEVSWNTMITGYAQNNYLAEAQRLFEEA----PVKDVFTWTA 283
+F +M + D +S ++ + + + + A DVF A
Sbjct: 101 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNA 160
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV--- 340
++ Y + G ++ A +F+ M K+ VSWNAM+AGY Q+ A ELF+ M +N+
Sbjct: 161 LIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLD 220
Query: 341 -ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+W +I GY+ Q G S ++L +F +M
Sbjct: 221 MVTWTAVIAGYS-------------------------------QRGCSHEALNVFRQMIF 249
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK----------VGFEAGCFVGNALLV 449
G N SVLS CA+L + G ++H +K G + V NAL+
Sbjct: 250 SGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 309
Query: 450 MYCKCGSVEEAYHAFEEIV--DKDVISWNTMIAGYARHGFGKDALMLFESM--KTVGIKP 505
MY KC S + A F++I +++V++W MI G+A++G DAL LF M + G+ P
Sbjct: 310 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 369
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT--CMVDLLGRAGRLDEAQ 563
+ T+ IL AC+H + G + + R + +S ++ C++++ + G +D A+
Sbjct: 370 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY-DSSAYFVANCLINMYSKCGDVDTAR 428
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGK 590
++ +M + A +W +++ ++G+
Sbjct: 429 HVFDSMS-QKSAISWTSMMTGYGMHGR 454
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 133/572 (23%), Positives = 233/572 (40%), Gaps = 110/572 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN ++ H+++ +AL +F+ M S + + PA +P
Sbjct: 78 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 137
Query: 120 QR--------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
Q D+ N +I Y + + A +F MM +DVVSWN M++GY+
Sbjct: 138 QTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 197
Query: 166 QNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACMLFE------SKANW- 214
Q+G AA +F M ++N ++W ++A Y Q G EA +F S N
Sbjct: 198 QSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCV 257
Query: 215 ---EVVSWNSLMGGF-----VKQKRLGDAKWIFDR---MPVRDEVSWNTMITGYAQNNYL 263
V+S + +G F + L + D D + +N +I Y++
Sbjct: 258 TIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 317
Query: 264 AEAQRLFEEAPV--KDVFTWTAMVSGYVQNGKVDEARMIFDAM--------PEKNTVSWN 313
A+ +F++ P+ ++V TWT M+ G+ Q G ++A +F M P T+S
Sbjct: 318 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 377
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQH 369
M ++ R+ + + +S N +I Y++ G++ AR++FD M Q
Sbjct: 378 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 437
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
ISW +++ GY G ++L +F +M++ G + F VL C++
Sbjct: 438 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH----------- 486
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH-GFG 488
CG V++ F D +S + + A H +
Sbjct: 487 ------------------------CGMVDQGLSYF------DSMSADYGLTPRAEHYAYA 516
Query: 489 KDALMLF-------ESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYG 538
D L F +++K + ++P + V +LSAC S+ L E MN +
Sbjct: 517 IDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE-- 574
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEA---QNLMK 567
N YT + ++ AGR + ++LMK
Sbjct: 575 ---NDGSYTLISNIYATAGRWKDVARIRHLMK 603
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 62/339 (18%)
Query: 332 FEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMPQH---DCISWAAIIAGYAQ 383
F + C NV N ++ Y++ G + A +FD + Q D ISW +I++ + +
Sbjct: 32 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 91
Query: 384 SGYSEDSLRLFIEM------KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
S + +L LF +M K ER + ++L C +L ++ K++HG ++ G
Sbjct: 92 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 151
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
FVGNAL+ Y KCG +E A F + KDV+SWN M+AGY++ G K A LF++
Sbjct: 152 FLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKN 211
Query: 498 MKTVGIK-----------------------------------PDDITMVGILSACSHTGL 522
M+ I P+ +T++ +LSAC+ G
Sbjct: 212 MRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGA 271
Query: 523 VEKGTEY--------FYSMNRDY-GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
+G E +++ D+ G + Y ++D+ + A+++ ++P E
Sbjct: 272 FSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEE 331
Query: 574 -DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
+ TW ++G YG + A ++ EM E G+
Sbjct: 332 RNVVTWTVMIGGHAQYGDS---NDALKLFVEMISEPYGV 367
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 104/221 (47%), Gaps = 14/221 (6%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M R G RL+ VL C L S G HG + GFE+ F+ NAL+ MY +CGS
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 457 VEEAYHAFEEIVDK---DVISWNTMIAGYARHGFGKDALMLFESM------KTVGIKPDD 507
+EEA F+EI + DVISWN++++ + + AL LF M K + D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
I++V IL AC V + E + R+ G + ++D + G ++ A +
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRN-GTFLDVFVGNALIDAYAKCGLMENAVKVFN 179
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
M F+ D +W A++ Y ++ + A E+ M EN
Sbjct: 180 MMEFK-DVVSWNAMVAG---YSQSGNFKAAFELFKNMRKEN 216
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 183/441 (41%), Gaps = 60/441 (13%)
Query: 38 KKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV---- 93
K + N + N P D+ W I + + GC AL+VF M S+
Sbjct: 203 KAAFELFKNMRKENIP-----LDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCV 257
Query: 94 ---------------SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
S I Y L L F DL+ +N +I Y + +S
Sbjct: 258 TIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGG-EDEDLMVYNALIDMYSKCRS 316
Query: 139 LSAARNLFEMMP--KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK------NEISWNG 190
AAR++F+ +P +R+VV+W M+ G+AQ G ++ A ++F M+ + N + +
Sbjct: 317 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 376
Query: 191 LLA-----AYVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+L A ++ G+ A +L ++S A + N L+ + K + A+ +FD
Sbjct: 377 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA---NCLINMYSKCGDVDTARHVFDS 433
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEA 297
M + +SW +M+TGY + +EA +F++ V D T+ ++ G VD+
Sbjct: 434 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 493
Query: 298 RMIFDAMPEKNTVSWNAMIAGY-----VQTKRMDMARELFEAMTCKNVA-SWNTMITGYA 351
FD+M ++ A Y + R+D A + + M + A W +++
Sbjct: 494 LSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACR 553
Query: 352 QSGEI---THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ HA N M + S+ I YA +G +D R+ MK+ G + + P
Sbjct: 554 VHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG--IKKRP 611
Query: 409 FTSVLSTCANLASLELGKQLH 429
S + AS +G + H
Sbjct: 612 GCSWVQGQKGTASFFVGDRSH 632
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/741 (35%), Positives = 417/741 (56%), Gaps = 62/741 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK---- 151
+++ Y+ R+VFD+M +R++V+W +ISGY RN LF M
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 152 -----------------------------------RDVVSWNTMLSGYAQNGYADAARRI 176
+ + N++++ Y + G AR +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 177 FDRMLEKNEISWNGLLAAYVQNG-RIEEACMLFESKANWEVVSWNSLMG----------- 224
FD+ K+ ++WN +++ Y NG +E M + + N+ +S +S
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-APVKDVFTWTA 283
F +Q K+ F + D+ ++ Y++ + +A RLF+E V +V +WTA
Sbjct: 312 RFTEQLHCSVVKYGF----LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367
Query: 284 MVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
M+SG++QN +EA +F M K N +++ ++ ++ ++ + ++
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERS 427
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
++ Y + G++ A +F + D ++W+A++AGYAQ+G +E ++++F E+ +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 400 YGERLNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G + N F+S+L+ CA AS+ GKQ HG +K ++ V +ALL MY K G++E
Sbjct: 488 GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A F+ +KD++SWN+MI+GYA+HG AL +F+ MK +K D +T +G+ +AC+
Sbjct: 548 SAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT 607
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H GLVE+G +YF M RD + P +H +CMVDL RAG+L++A +++NMP + W
Sbjct: 608 HAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIW 667
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
+L ACR++ KTEL AAE I M+PE++ YVLLSN+YA SG W + +KVR M +R
Sbjct: 668 RTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 727
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
VKK GYSW+EV+NK ++F GD HP KD+IY LE+L +LK G+ T VL D+
Sbjct: 728 NVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+E KE +L HSE+LA+A+G+++ P G P+ ++KNLRVC DCH IK I+KI R I++
Sbjct: 788 DDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVV 847
Query: 759 RDNNRFHHFSG-GSCSCGDYW 778
RD+NRFHHFS G CSCGD+W
Sbjct: 848 RDSNRFHHFSSDGVCSCGDFW 868
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/589 (24%), Positives = 253/589 (42%), Gaps = 100/589 (16%)
Query: 132 GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF----------DRML 181
G V + L A NLF+ P RD S+ ++L G++++G A+R+F D +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ + + L + ++ C+ F + V SL+ ++K D + +FD
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSV--GTSLVDTYMKGSNFKDGRKVFDE 153
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTA-------------- 283
M R+ V+W T+I+GYA+N+ E LF E + FT+ A
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 284 ---------------------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
+++ Y++ G V +AR++FD K+ V+WN+MI+GY
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 323 KRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQH----DCISW 374
A +F +M V +S+ ++I A E+ L + ++ D
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 375 AAIIAGYAQSGYSEDSLRLF--------------------------------IEMKRYGE 402
A++ Y++ D+LRLF EMKR G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
R N ++ +L+ ++ E +H Q+VK +E VG ALL Y K G VEEA
Sbjct: 394 RPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F I DKD+++W+ M+AGYA+ G + A+ +F + GIKP++ T IL+ C+ T
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ F+ + + + ++ + + G ++ A+ + K E D +W +++
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMI 568
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMY-VLLSNLYAASGRWGDVSK 630
+G+ A KA +V EM+ M V ++AA G V +
Sbjct: 569 SGYAQHGQ---AMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEE 614
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 125/243 (51%), Gaps = 2/243 (0%)
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
VA G S + +A NLFD+ P D S+ +++ G+++ G ++++ RLF+ + R
Sbjct: 27 VAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR 86
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G ++ S F+SVL A L G+QLH Q +K GF VG +L+ Y K + ++
Sbjct: 87 LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
F+E+ +++V++W T+I+GYAR+ + L LF M+ G +P+ T L +
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
G+ +G + + ++ G+ +++L + G + +A+ L + TW
Sbjct: 207 EGVGGRGLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWN 264
Query: 580 ALL 582
+++
Sbjct: 265 SMI 267
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/582 (40%), Positives = 368/582 (63%), Gaps = 8/582 (1%)
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR---DEVSWNTMITGYAQN 260
A +F S N V WN ++ G ++ +L A + + RM + ++ ++ T+ +
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVA 145
Query: 261 NYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
+ E +++ + DV +A + Y G++++AR +F + E + V WN MI
Sbjct: 146 QAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMI 204
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
GY++ ++ A+ LF M KN+ SWN MI G A+ G + AR LFD M + D ISW++
Sbjct: 205 DGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSS 264
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
++ GY +G +++L +F +M+R R R +SVL+ C+N+ +++ G+ +H L +
Sbjct: 265 MVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNS 324
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ +G ALL MY KCG ++ + FEE+ ++++ +WN MI G A HG +DAL LF
Sbjct: 325 IKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFS 384
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
++ +KP+ IT+VG+L+AC+H G V+KG F +M YGV P +HY CMVDLLGR+
Sbjct: 385 KLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRS 444
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G EA++L+ +MP +P+AA WGALLGACR++G +LAE+ +++ E+EP+N+G YVLLS
Sbjct: 445 GLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLS 504
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+YA GR+ DVSK+R M+DRG+K V G S +++ VH F +GD HP+ IY L+
Sbjct: 505 NIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
++ +L+ G T VL D+ EEEKE + YHSEKLA+A+G+++ G+ I ++KNLR
Sbjct: 565 IIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLR 624
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC+DCH+A K IS+I R II+RD R+HHF G+CSC D+W
Sbjct: 625 VCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 222/507 (43%), Gaps = 68/507 (13%)
Query: 90 RSSVSYNAMISGYLLNGQLDP-------ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
RS + +SG LL +P A +VF +P ++ WN++I G + N L A
Sbjct: 58 RSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKA 117
Query: 143 -----RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA--- 194
R + + P + ++ T+ + R+I +++ S + +A
Sbjct: 118 IYFYGRMVIDARPNK--FTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIH 175
Query: 195 -YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
Y GR+E+A +F S + +VV WN+++ G++K L AK +F +MPV++ SWN M
Sbjct: 176 MYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVM 234
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT---- 309
I G A+ L +A++LF+E +D +W++MV GY+ G+ EA IF M + T
Sbjct: 235 INGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGR 294
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDR 365
++++A +D R + + ++ ++ YA+ G + +F+
Sbjct: 295 FILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEE 354
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
M + + +W A+I G A G +ED+L LF +++ + N VL+ CA+
Sbjct: 355 MKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAH------- 407
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
AG FV L + ++ E Y VD ++ + M+ R
Sbjct: 408 -------------AG-FVDKGLRIFQ----TMREFYG-----VDPELEHYGCMVDLLGRS 444
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG---LVEKGTEYFYSMNRDYGVIPN 542
G +A L SM +KP+ +L AC G L E+ + + N
Sbjct: 445 GLFSEAEDLINSMP---MKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQ-----N 496
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNM 569
S Y + ++ + GR D+ + K M
Sbjct: 497 SGRYVLLSNIYAKVGRFDDVSKIRKLM 523
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 26/345 (7%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA-----RQVFDQMPQRDLVSWNVMISG 132
D AL VF+S+P + +N +I G L N +L A R V D P + ++ +
Sbjct: 84 DFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNK--FTYPTLFKA 141
Query: 133 YVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+++ R + + K DV + + YA G + AR++F E + + W
Sbjct: 142 CSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSG-ESDVVCW 200
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N ++ Y++ G +E A LF + SWN ++ G K LGDA+ +FD M RDE+
Sbjct: 201 NTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI 260
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
SW++M+ GY EA +F++ ++ F +++++ G +D+ R + A
Sbjct: 261 SWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWV-HAY 319
Query: 305 PEKNTVSWNAMIAG-----YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
++N++ +A++ Y + R+DM E+FE M + + +WN MI G A G A
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDA 379
Query: 360 RNLFDRMPQ----HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
LF ++ + + I+ ++ A +G+ + LR+F M+ +
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREF 424
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 166/366 (45%), Gaps = 27/366 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N MI GYL G L+ A+ +F QMP +++ SWNVMI+G + +L AR LF+ M +R
Sbjct: 198 VCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSER 257
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA---- 204
D +SW++M+ GY G A IF +M + + +LAA G I++
Sbjct: 258 DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVH 317
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW-IFDRMPVRDEVSWNTMITGYAQNNYL 263
L + + V +L+ + K RL D W +F+ M R+ +WN MI G A +
Sbjct: 318 AYLKRNSIKLDAVLGTALLDMYAKCGRL-DMGWEVFEEMKEREIFTWNAMIGGLAIHGRA 376
Query: 264 AEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNA 314
+A LF +E +K + T +++ G VD+ IF M E V +
Sbjct: 377 EDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGC 436
Query: 315 MIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHA----RNLFDRMPQH 369
M+ ++ A +L +M K N A W ++ G A + L + PQ+
Sbjct: 437 MVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQN 496
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ + YA+ G +D ++ MK G + P S++ + ++G H
Sbjct: 497 SG-RYVLLSNIYAKVGRFDDVSKIRKLMKDRG--IKTVPGVSIVDLNGTVHEFKMGDGSH 553
Query: 430 GQLVKV 435
Q+ ++
Sbjct: 554 PQMKEI 559
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 24/297 (8%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
+G+ D+ WN I +++ G ++A +F MP ++ S+N MI+G G L AR++F
Sbjct: 192 SGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLF 251
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGY 169
D+M +RD +SW+ M+ GY+ A +F+ M P R ++S ++L+ + G
Sbjct: 252 DEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILS--SVLAACSNIGA 309
Query: 170 ADAARRIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMG 224
D R + L++N I + +L Y + GR++ +FE E+ +WN+++G
Sbjct: 310 IDQGRWV-HAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIG 368
Query: 225 GFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEE-----APV 275
G R DA +F ++ + ++ ++T A ++ + R+F+
Sbjct: 369 GLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVD 428
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMAREL 331
++ + MV ++G EA + ++MP K N W A++ D+A +
Sbjct: 429 PELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV 485
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 9/223 (4%)
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK--CGSVEEAYHAFEEIVDKDVISW 475
++ SL+ QLHG +++ G +V ALL Y + + A F I + +V W
Sbjct: 42 SITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N +I G + A+ + M + +P+ T + ACS V++G + +
Sbjct: 102 NIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQ-IHGHVV 159
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+G+ + + + + GRL++A+ + + E D W ++ Y K + E
Sbjct: 160 KHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSG--ESDVVCWNTMIDG---YLKCGVLE 214
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
A + +M +N G + ++ N A G GD K+ +M +R
Sbjct: 215 AAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSER 257
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/806 (33%), Positives = 423/806 (52%), Gaps = 107/806 (13%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL--------------------- 103
NV + + + G A+ +F MP R S+N ++SGY
Sbjct: 75 NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 134
Query: 104 ---------------------LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
L QL Q FD ++ + ++ +VR ++ A
Sbjct: 135 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAA--ALVDMFVRCGAVDLA 192
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
LF + + + N+ML+GY + D A +FD M E++ +SWN +++A Q+GR+
Sbjct: 193 SRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVR 252
Query: 203 EAC-MLFESKANWEVVSWNSLMGGFVKQKRLGDAKW-------IFDRMPVRDEVSWNTMI 254
EA M+ + ++ + + RL +W + +P D + ++
Sbjct: 253 EALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALV 312
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE-------- 306
YA++ EA+ +F ++ WT ++SG++Q G E+ +F+ M
Sbjct: 313 ELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQF 372
Query: 307 -------------------------------KNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+ V N++I+ Y + + A +F M
Sbjct: 373 ALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFM 432
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF- 394
K++ SW +MIT Y+Q G + AR FD M + + I+W A++ Y Q G ED LR++
Sbjct: 433 NEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYK 492
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+ + R + + ++ CA+L + +LG Q+ G+ VKVG V NA++ MY KC
Sbjct: 493 VMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKC 552
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G + EA F+ + KD++SWN MI GY++HG GK A+ +F+ + G KPD I+ V +L
Sbjct: 553 GRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVL 612
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
S CSH+GLV++G YF M R + + P +H++CMVDLLGRAG L EA++L+ +MP +P
Sbjct: 613 SGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPT 672
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
A WGALL AC+++G ELAE AA+ +FE++ ++G Y+L++ +YA +G+ D +++R
Sbjct: 673 AEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKL 732
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY--STK 692
MRD+G+KK GYSW+EV NKVH F D HP+ I L+EL K+ + G+V ST+
Sbjct: 733 MRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTR 792
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
+H HSEKLAVA+G++++P PI +MKNLR+C DCH IK IS +
Sbjct: 793 SEIH-------------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVT 839
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
GR ++RD RFHHF+GGSCSCGDYW
Sbjct: 840 GREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 190/403 (47%), Gaps = 38/403 (9%)
Query: 19 HTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPA----GDWDIRQWNVAITTHMRN 74
H Q I L + +PY + ++ + S + K D + W V I+ ++
Sbjct: 293 HAQVIRNL---PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQY 349
Query: 75 GCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQMPQ----RDLVSW 126
GC ++ +FN M + +ISG L RQ+ + + +V
Sbjct: 350 GCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS 409
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N +IS Y + +L +A +F M ++D+VSW +M++ Y+Q G AR FD M EKN I
Sbjct: 410 NSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 469
Query: 187 SWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVSWNSLMGGF--VKQKRLGDAKWIF 239
+WN +L AY+Q+G E+ ML E + V++ +L G + +LGD I
Sbjct: 470 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQ--II 527
Query: 240 DRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
R + D N +IT Y++ + EA+++F+ VKD+ +W AM++GY Q+G
Sbjct: 528 GRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGK 587
Query: 296 EARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTM 346
+A IFD + ++ +S+ A+++G + + + F+ M + ++ M
Sbjct: 588 QAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCM 647
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAGYAQSGYSE 388
+ ++G +T A++L D MP W A+++ G +E
Sbjct: 648 VDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNE 690
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 313 NAMIAGYVQTKRM-DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
N ++ Y+ + D R L + NV + N M+ GYA+ G ++ A LF RMP D
Sbjct: 43 NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 102
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHG 430
SW +++GY QS SL F+ M R G+ N + +C L L QL
Sbjct: 103 ASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLA 162
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGS-------------------------------VEE 459
+ K + V AL+ M+ +CG+ V+
Sbjct: 163 MVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDH 222
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F+ + ++DV+SWN M++ ++ G ++AL + M++ G++ D T L+AC+
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 282
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHY--TCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+ G + + R+ +P+ Y + +V+L ++G EA+ + ++ + A
Sbjct: 283 LSSLRWGKQLHAQVIRN---LPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA- 338
Query: 578 WGALLGACRLYG 589
W L+ YG
Sbjct: 339 WTVLISGFLQYG 350
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 154/359 (42%), Gaps = 72/359 (20%)
Query: 8 RQLHSSCILHQHTQSI---NRLQSP-ANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQ 63
RQLHS C+ Q++ N L S A + S + + R +N K DI
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK-----------DIVS 439
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W IT + + G A F+ M ++ +++NAM+ Y+ +G + +++ M +
Sbjct: 440 WTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEY 499
Query: 124 V--SW--------------------------------------NVMISGYVRNKSLSAAR 143
V W N +I+ Y + + AR
Sbjct: 500 VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEAR 559
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNG 199
+F+ + +D+VSWN M++GY+Q+G A IFD +L++ + IS+ +L+ +G
Sbjct: 560 KVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 619
Query: 200 RIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTM 253
++E F+ +S ++ ++ + L +AK + D MP++ W +
Sbjct: 620 LVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGAL 679
Query: 254 ITG--YAQNNYLAE--AQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
++ NN LAE A+ +FE ++P D ++ M Y GK D++ I M +K
Sbjct: 680 LSACKIHGNNELAELAAKHVFELDSP--DSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 736
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 118/300 (39%), Gaps = 46/300 (15%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH-AFEEI 467
F L +C +L + LHG+LV VG + F+ N LL Y CG++ +A +I
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+VI+ N M+ GYA+ G DA+ LF M + + M G S LV
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQ--SRQYLVS--L 122
Query: 528 EYFYSMNRDYGVIPNSKHYTC-----------------------------------MVDL 552
E F SM+R PN+ C +VD+
Sbjct: 123 ETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDM 182
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
R G +D A L + EP ++L Y KT + A E+ M + +
Sbjct: 183 FVRCGAVDLASRLFVRIK-EPTMFCRNSMLAG---YVKTYGVDHALELFDSMPERDVVSW 238
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
++ + + SGR + + + M+ +GV+ T S L ++ + G LH + R
Sbjct: 239 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 298
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/802 (33%), Positives = 415/802 (51%), Gaps = 99/802 (12%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA-------RQVFDQ 117
N+ + + + G A+ +F MP R S+N ++SGY +GQ A RQ D
Sbjct: 96 NIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDS 155
Query: 118 MP---------------------------------QRDLVSWNVMISGYVRNKSLSAARN 144
+P Q D ++ VR ++ A
Sbjct: 156 LPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASK 215
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
F + ++ N+ML GYA++ D A IF M E++ +SWN +++A ++GR+ EA
Sbjct: 216 QFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREA 275
Query: 205 C-MLFESKANWEVVSWNSLMGGFVKQKRLGDAKW-------IFDRMPVRDEVSWNTMITG 256
M+ + + RL +W + +P D + M+
Sbjct: 276 LDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVEL 335
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------------ 304
YA+ EA+R+F ++ +WT ++ G++Q G E+ +F+ M
Sbjct: 336 YAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFAL 395
Query: 305 ---------------------------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+ V N++I+ Y + + A +F M
Sbjct: 396 ATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAE 455
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+++ SW MIT Y+Q G I AR FD M + I+W A++ Y Q G ED L+++ +M
Sbjct: 456 RDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDM 515
Query: 398 KRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
+ + + + ++ CA++ + +LG Q+ G VKVG V NA++ MY KCG
Sbjct: 516 LTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGR 575
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+ EA AF+ + KD++SWN MI GY++HG GK A+ +F+ + G KPD I+ V +LS
Sbjct: 576 ISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSG 635
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH+GLVE+G YF M RD+ + P +H++CMVDLLGRAG L EA+NL+ MP +P A
Sbjct: 636 CSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAE 695
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
WGALL AC+ +G +LAE AA+ +F+++ +G Y+LL+ +YA +G+ D ++VR MR
Sbjct: 696 VWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMR 755
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
D+G+KK GYSW+EV N+VH F D HP+ I L+EL K+ G+V +
Sbjct: 756 DKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVRT------ 809
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
E + + +HSEKLAVA+GI+S+PA PI +MKNLR+C+DCH IK IS + R
Sbjct: 810 ---ESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREF 864
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
++RD RFHHF GGSCSC DYW
Sbjct: 865 VIRDGVRFHHFKGGSCSCMDYW 886
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 149/312 (47%), Gaps = 39/312 (12%)
Query: 313 NAMIAGYVQTKRMDMARELF-EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
N ++ Y+ + AR L + +T NV + N M+ GYA+ G ++ A LF RMP D
Sbjct: 64 NTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDV 123
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHG 430
SW I++GY QSG ++L +F+ M++ G+ L N F V+ +C L E+ QL G
Sbjct: 124 ASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLG 183
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGS-------------------------------VEE 459
L K + V AL+ M +CG+ V+
Sbjct: 184 LLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDH 243
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F+ + ++DV+SWN +I+ ++ G ++AL + M G++PD T L+AC+
Sbjct: 244 ALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACAR 303
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHY--TCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+E G + + R+ +P+ Y + MV+L + G EA+ + ++ + ++ +
Sbjct: 304 LSSLEWGKQLHVQVIRN---LPHIDPYVASAMVELYAKCGCFKEAKRVFSSLR-DRNSVS 359
Query: 578 WGALLGACRLYG 589
W L+G YG
Sbjct: 360 WTVLIGGFLQYG 371
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 33/352 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISG------YLLNGQLDPARQ 113
W V I ++ GC ++ +FN M + +ISG L QL
Sbjct: 360 WTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSL-- 417
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
R +V N +IS Y + +L A +F M +RD+VSW M++ Y+Q G A
Sbjct: 418 CLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKA 477
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-----MLFESKANWEVVSWNSLMGGF-- 226
R FD M +N I+WN +L AY+Q+G E+ ML E + V++ +L G
Sbjct: 478 REFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCAD 537
Query: 227 VKQKRLGDAKWIFDRMPV---RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
+ +LGD + I + V D N +IT Y++ ++EA++ F+ KD+ +W A
Sbjct: 538 IGANKLGD-QIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNA 596
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAM---- 335
M++GY Q+G +A IFD + K +S+ A+++G + ++ + F+ M
Sbjct: 597 MITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDH 656
Query: 336 -TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAGYAQSG 385
+ ++ M+ ++G + A+NL D MP W A+++ G
Sbjct: 657 NISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHG 708
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 155/354 (43%), Gaps = 64/354 (18%)
Query: 9 QLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAI 68
QLHS C+ HT+++ + S + + Y L+ + + DI W I
Sbjct: 413 QLHSLCLKSGHTRAV--VVSNSLISMYAKCGNLQ-----NAELIFNFMAERDIVSWTGMI 465
Query: 69 TTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF-DQMPQRDLV-SW 126
T + + G A F+ M R+ +++NAM+ Y+ +G + +++ D + ++D++ W
Sbjct: 466 TAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDW 525
Query: 127 --------------------------------------NVMISGYVRNKSLSAARNLFEM 148
N +I+ Y + +S AR F+
Sbjct: 526 VTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDF 585
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA 204
+ ++D+VSWN M++GY+Q+G A IFD +L K + IS+ +L+ +G +EE
Sbjct: 586 LSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEG 645
Query: 205 CMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITGYA 258
F+ +S ++ ++ + L +AK + D MP++ W +++
Sbjct: 646 KFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACK 705
Query: 259 Q--NNYLAE--AQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
NN LAE A+ LF+ ++P + A + Y GK D++ + M +K
Sbjct: 706 THGNNDLAELAAKHLFDLDSPGSGGYMLLAKM--YADAGKSDDSAQVRKLMRDK 757
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 46/306 (15%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF-EEI 467
L +C ++L + LH +L+ VG + F+ N LL Y CG++ +A + +EI
Sbjct: 28 LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+ +VI+ N M+ GYA+ G DA+ LF M T D + I+S +G
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPT----RDVASWNTIMSGYYQSGQFLNAL 143
Query: 528 EYFYSMNRDYGVIPNSKHYTC-----------------------------------MVDL 552
+ F SM + +PN+ + C +VD+
Sbjct: 144 DIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDM 203
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
L R G +D A + L+G Y K+ + A E+ M + +
Sbjct: 204 LVRCGAMDFASKQFSRIKNPTIICRNSMLVG----YAKSHGVDHALEIFKSMPERDVVSW 259
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
++ + + SGR + + + M +GV+ T S L ++ + G LH + R
Sbjct: 260 NMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIR 319
Query: 671 IYAYLE 676
+++
Sbjct: 320 NLPHID 325
>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 662
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/640 (39%), Positives = 394/640 (61%), Gaps = 30/640 (4%)
Query: 40 TLKRHLNSKSRNKPKP------AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV 93
T + + KSR+ P D ++ N I+ R G + A +F+ + RR++V
Sbjct: 20 TRQLYFTVKSRSFAMPPRAKTSVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTV 79
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR---NKSLSAARNLFEMMP 150
++N+MISGY+ G++ AR++FD+MP+RD+VSWN++ISGYV + + RNLF+ MP
Sbjct: 80 TWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMP 139
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
+R VSWNTM+SGYA+NG D A +F+ M EKN +SWN +++ ++QNG + A F+
Sbjct: 140 ERCCVSWNTMISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKR 199
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIF----DRMPVRDEV--SWNTMITGYAQNNYLA 264
+V S ++L+ G ++ L A+ I + ++ + ++NT+I GY Q +
Sbjct: 200 MPERDVTSLSALVSGLIQNSELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVD 259
Query: 265 EAQRLFEEAPV-------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
EAQ LF++ P ++V +W M+ YV+ G V AR +FD MP++++ S
Sbjct: 260 EAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFS 319
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
WN MI+GYV M+ A LF M + SWN MI+GYAQSG + A + F+RMPQ +
Sbjct: 320 WNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNL 379
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+SW ++IAGY ++G ++ LFI+M+ GE+ +R +S+LS + + L+LG Q+H Q
Sbjct: 380 VSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLGMQIH-Q 438
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKD 490
LV + NAL+ MY +CG++ EA F E+ + K+VISWN MI GYA HG+ +
Sbjct: 439 LVSKTVIPDVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIGGYASHGYATE 498
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
AL LF+ M++ ++P IT + +L+AC+H GLVE+G F SM DYGV P +H+ +V
Sbjct: 499 ALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRIFESMVSDYGVEPRVEHFASLV 558
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
D++GR G+L+EA +L+ +M EPD A WGALLGA R++ E+A AAE + ++EP+++
Sbjct: 559 DIVGRQGQLEEALDLINSMTIEPDKAVWGALLGASRVHNNVEMARVAAEALMKLEPDSSV 618
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
Y+LL N+Y G+W + +++R M +KK SW++
Sbjct: 619 PYILLYNMYVDVGQWDNAAEIRSMMERNNIKKEAAISWVD 658
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/679 (37%), Positives = 396/679 (58%), Gaps = 37/679 (5%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG-----YAQNGYADAARRIFDRMLEK 183
+I Y R K L+ + L M+ + + NT LS Y++ G D ++FD+M ++
Sbjct: 81 LIQTYARTKELNKGKQLHAMLIRGGCLP-NTFLSNHFLNLYSKCGELDYTIKLFDKMSQR 139
Query: 184 NEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFVKQKRLGDAKW----- 237
N +SW ++ + N R +EA F + + E+ + +L LG ++
Sbjct: 140 NMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVH 199
Query: 238 -IFDRMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
+ + E+ + +T Y++ L++A + FEE P KD WT+M+ G+V+NG
Sbjct: 200 CLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFK 259
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW------------ 343
+A + M V+ + I +V + L + K++ +
Sbjct: 260 KALTAYMKM-----VTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFI 314
Query: 344 -NTMITGYAQSGEITHARNLFDRMPQHDCIS---WAAIIAGYAQSGYSEDSLRLFIEMKR 399
N + Y++SG++ A N+F DCIS AII GY + E +L F++++R
Sbjct: 315 GNALTDMYSKSGDMVSASNVFQ--IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR 372
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G N FTS++ CAN A LE G QLHGQ+VK F+ FV + L+ MY KCG +
Sbjct: 373 RGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDH 432
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
+ F+EI + D I+WNT++ +++HG G++A+ F M G+KP+ +T V +L CSH
Sbjct: 433 SIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSH 492
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
G+VE G YF SM + YGV+P +HY+C++DLLGRAG+L EA++ + NMPFEP+ W
Sbjct: 493 AGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWC 552
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
+ LGAC+++G E A+ AA+ + ++EPEN+G +VLLSN+YA +W DV +R ++D
Sbjct: 553 SFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGN 612
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
+ K+ GYSW++++NK H F V D HP+K IY L+ L ++K+ G+V T+ VL D+
Sbjct: 613 MNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMD 672
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
+ KE +L YHSE++AVA+ +L+ P G PI V KNLRVC DCH+A+K ISK+ R II+R
Sbjct: 673 DNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVR 732
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D +RFHHFS GSCSCGDYW
Sbjct: 733 DISRFHHFSNGSCSCGDYW 751
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 150/363 (41%), Gaps = 45/363 (12%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV-VSWNTMLSGY 164
G+L A + F++MP +D V W MI G+V+N A + M DV + + + S
Sbjct: 225 GELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTL 284
Query: 165 AQNGYADAAR-------RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW-EV 216
+ A+ I E N L Y ++G + A +F+ ++ +
Sbjct: 285 SACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISI 344
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEE 272
VS +++ G+V+ ++ A F + R +E ++ ++I A L +L +
Sbjct: 345 VSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQ 404
Query: 273 AP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
+D F + +V Y + G D + +FD + + ++WN ++ + Q A
Sbjct: 405 VVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNA 464
Query: 329 RELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRM-------PQHDCISWAAI 377
E F M + N ++ ++ G + +G + N F M P+ + ++ +
Sbjct: 465 IETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEE--HYSCV 522
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF-TSVLSTCANLASLELGKQLHGQLVKVG 436
I ++G ++K + +N PF +V C+ L + ++HG + +
Sbjct: 523 IDLLGRAG----------KLKEAEDFINNMPFEPNVFGWCSFLGAC----KIHGDMERAK 568
Query: 437 FEA 439
F A
Sbjct: 569 FAA 571
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/782 (34%), Positives = 414/782 (52%), Gaps = 110/782 (14%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG-------------------- 132
+++N M++GY G L A ++FD+MP+RD+ SWN ++S
Sbjct: 88 ITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELA 147
Query: 133 -------------------------YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+VR + A LF + + + N+ML+GYA+
Sbjct: 148 PQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 207
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML-------------------F 208
D A F+ M E++ +SWN ++AA Q+GR+ EA L
Sbjct: 208 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 267
Query: 209 ESKANWEVVSW--------------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
+ A + W ++L+ + K +AK +F+ + R+ V
Sbjct: 268 TACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 327
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEAR----MI 300
SW +I G Q +++ LF + + D F ++SG + R +
Sbjct: 328 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 387
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
+ + V N++I+ Y + + A +F +M+ +++ SW +MIT Y+Q G I AR
Sbjct: 388 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 447
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP----FTSVLSTC 416
FD M + I+W A++ Y Q G ED L+++ M + + +P + ++ C
Sbjct: 448 EFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAML---SQKDVTPDWVTYVTLFRGC 504
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A++ + +LG Q+ G VK G V NA + MY KCG + EA F+ + KDV+SWN
Sbjct: 505 ADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWN 564
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
MI GY++HG GK A F+ M + G KPD I+ V +LS CSH+GLV++G YF M R
Sbjct: 565 AMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRV 624
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+G+ P +H++CMVDLLGRAG L EA++L+ MP +P A WGALL AC+++G ELAE
Sbjct: 625 HGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAEL 684
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
AA+ +FE++ ++G Y+LL+ +Y+ +G+ D ++VR MRD+G+KK GYSW+EV+NKVH
Sbjct: 685 AAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVH 744
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
F D HP+ I ++EL K+ G+V + E + + +HSEKLAV
Sbjct: 745 VFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRT---------ESPRSEI--HHSEKLAV 793
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+GI+S+PA PI +MKNLR+C DCH IK IS + R ++RD RFHHF GSCSCGD
Sbjct: 794 AFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGD 853
Query: 777 YW 778
YW
Sbjct: 854 YW 855
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 205/441 (46%), Gaps = 61/441 (13%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANW-EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
N LL AY+ G + +A L + V++ N +M G+ KQ L DA+ +FDRMP RD
Sbjct: 59 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 118
Query: 248 VSWNTMI--TGYAQNNYLA-EAQRLFEEAPVKDVFTW-----------TAMVSGYVQNGK 293
SWNT++ T ++++ A E AP W TA+V +V+ G
Sbjct: 119 ASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY 178
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
VD A +F + N+M+AGY + +D A E FE M ++V SWN MI +QS
Sbjct: 179 VDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS 238
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + ++L L +EM R G RL+ + +TS L
Sbjct: 239 GRV-------------------------------REALGLVVEMHRKGVRLDSTTYTSSL 267
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
+ CA L SL GKQLH ++++ + +V +AL+ +Y KCGS +EA F + D++ +
Sbjct: 268 TACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 327
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SW +I G ++ ++ LF M+ + D + ++S C + + G + +S+
Sbjct: 328 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ-LHSL 386
Query: 534 NRDYG-----VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
G V+ NS ++ L + G L A+ + +M E D +W +++ A Y
Sbjct: 387 CLKSGHNRAIVVSNS-----LISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITA---Y 437
Query: 589 GKTELAEKAAEVIFEMEPENA 609
+ KA E M NA
Sbjct: 438 SQIGNIIKAREFFDGMATRNA 458
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 139/604 (23%), Positives = 253/604 (41%), Gaps = 132/604 (21%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
GD D+ + +R G D A +F+ + R + N+M++GY +D A + F+
Sbjct: 161 GDPDVE--TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFE 218
Query: 117 QMPQRDLVSWNVMI-----SGYVR---------------------NKSLSAARNLFEM-- 148
M +RD+VSWN+MI SG VR SL+A LF +
Sbjct: 219 DMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGW 278
Query: 149 -----------MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
+P+ D + ++ YA+ G A+R+F+ + ++N +SW L+ +Q
Sbjct: 279 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 338
Query: 198 NGRIEEACMLF---------------------------------------ESKANWEVVS 218
++ LF +S N +V
Sbjct: 339 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 398
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
NSL+ + K L +A+++F M RD VSW +MIT Y+Q + +A+ F+ ++
Sbjct: 399 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNA 458
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VSWNAMIAGYVQTKRMDMARELF- 332
TW AM+ Y+Q+G ++ ++ AM + V++ + G + ++
Sbjct: 459 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 518
Query: 333 ---EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+A NV+ N IT Y++ G I+ A+ LFD + D +SW A+I GY+Q G +
Sbjct: 519 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 578
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALL 448
+ + F +M G + + + +VLS C++ ++ GK + +V G G + ++
Sbjct: 579 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 638
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
+ + G + EA ++++DK + +KP
Sbjct: 639 DLLGRAGHLTEA----KDLIDK------------------------------MPMKPTAE 664
Query: 509 TMVGILSACSHTG---LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+LSAC G L E ++ + ++ P+S Y + + AG+ D++ +
Sbjct: 665 VWGALLSACKIHGNDELAELAAKHVFELDS-----PDSGSYMLLAKIYSDAGKSDDSAQV 719
Query: 566 MKNM 569
K M
Sbjct: 720 RKLM 723
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 174/356 (48%), Gaps = 28/356 (7%)
Query: 76 CCDSALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
C LH S R+ V N++IS Y G L A VF M +RD+VSW MI+ Y
Sbjct: 378 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 437
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS--WNGL 191
+ ++ AR F+ M R+ ++WN ML Y Q+G + +++ ML + +++ W
Sbjct: 438 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 497
Query: 192 LAAY-----VQNGRIEEACMLFESKAN--WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
+ + + ++ + + KA V N+ + + K R+ +A+ +FD +
Sbjct: 498 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNG 557
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMI 300
+D VSWN MITGY+Q+ +A + F++ K D ++ A++SG +G V E ++
Sbjct: 558 KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLY 617
Query: 301 FDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMIT-----G 349
FD M + +S ++ M+ + + A++L + M K A W +++ G
Sbjct: 618 FDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHG 677
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+ E+ A+++F+ + D S+ + Y+ +G S+DS ++ M+ G + N
Sbjct: 678 NDELAELA-AKHVFE-LDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN 731
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 64/355 (18%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVA 67
RQLHS C+ H ++I + S + + Y L+ S + DI W
Sbjct: 381 RQLHSLCLKSGHNRAI--VVSNSLISLYAKCGDLQNAEFVFSSMSER-----DIVSWTSM 433
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLV-S 125
IT + + G A F+ M R+++++NAM+ Y+ +G + +++ M Q+D+
Sbjct: 434 ITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 493
Query: 126 W--------------------------------------NVMISGYVRNKSLSAARNLFE 147
W N I+ Y + +S A+ LF+
Sbjct: 494 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 553
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEE 203
++ +DVVSWN M++GY+Q+G A + FD ML K + IS+ +L+ +G ++E
Sbjct: 554 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 613
Query: 204 ACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG- 256
+ F+ +S ++ ++ + L +AK + D+MP++ W +++
Sbjct: 614 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 673
Query: 257 -YAQNNYLAE--AQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
N+ LAE A+ +FE ++P D ++ + Y GK D++ + M +K
Sbjct: 674 KIHGNDELAELAAKHVFELDSP--DSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK 726
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/736 (36%), Positives = 405/736 (55%), Gaps = 87/736 (11%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKN 184
++S + + S++ A +FE + + ++TML GYA+N + A RM ++
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 185 EISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
++ LL N ++ L + V + ++ + K +++ DA +FD
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQ----RLFEEAPVKDVFTW--------------- 281
RMP RD VSWNT+I G++QN + +A R+ +E D T
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 282 --------------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
TA+ Y + G V+ AR+IFD M +K VSWN+M+ GYVQ
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 322 TKRMDMARELFEAM-----------------TC----------------------KNVAS 342
+ A +FE M C +++
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N++I+ Y++ + A ++F+ + +SW A+I GYAQ+G ++L F EMK G
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ + SV+ A L+ K +HG +++ + FV AL+ MY KCG++ A
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ I D+ VI+WN MI GY HG G+ AL LF+ MK ++P+DIT + ++SACSH+GL
Sbjct: 507 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 566
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V++G +F SM +DYG+ P+ HY MVDLLGRAGR+ EA + ++NMP P +GA
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXX 626
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
GAC+++ E+ EKAA+ +FE+ P+ G +VLL+N+YA++ +W V++VR M +G+KK
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKK 686
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G S +E++N+VH+F G T HP+ RIYA+LEEL +++K G+V T L+L DV ++
Sbjct: 687 TPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDV 745
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
+E +L HSEKLA+A+G+L+ G I V KNLRVC DCHNA K+IS + GR II+RD
Sbjct: 746 QEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQ 805
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF G CSCGDYW
Sbjct: 806 RFHHFKNGICSCGDYW 821
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 172/386 (44%), Gaps = 91/386 (23%)
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTMLS 162
Q+D A ++FD+MP+RDLVSWN +I+G+ +N K+L + + + D ++ T+L
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 163 G-----------------------------------YAQNGYADAARRIFDRMLEKNEIS 187
Y++ G + AR IFD M +K +S
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS 316
Query: 188 WNGLLAAYVQNGRIEEACMLFES------------------------------------- 210
WN ++ YVQNG E+A +FE
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 211 --KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
++ NSL+ + K KR+ A IF+ + R VSWN MI GYAQN ++EA
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 269 LFEEAPV----KDVFTWTAMVSGYVQNGKVDEAR----MIFDAMPEKNTVSWNAMIAGYV 320
F E D FT +++ + A+ +I + +KN A++ Y
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAA 376
+ + MAR+LF+ ++ ++V +WN MI GY G A +LFD+M + + I++ +
Sbjct: 497 KCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 377 IIAGYAQSGYSEDSLRLFIEMKR-YG 401
+I+ + SG ++ LR F MK+ YG
Sbjct: 557 VISACSHSGLVDEGLRHFKSMKQDYG 582
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 56/317 (17%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------------- 121
G ++A +F+ M +++ VS+N+M+ GY+ NG+ + A VF++M +
Sbjct: 297 GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEAL 356
Query: 122 --------------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
D+ N +IS Y + K + A ++F + R V
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CML 207
SWN M+ GYAQNG A F M ++ + + ++ A + A ++
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
S + + +L+ + K + A+ +FD + R ++WN MI GY + A
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536
Query: 268 RLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSWNAMIAG 318
LF++ A + T+ +++S +G VDE F +M E + + AM+
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 319 YVQTKRMDMARELFEAM 335
+ R+ A + E M
Sbjct: 597 LGRAGRIKEAWDFIENM 613
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 53/268 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI N I+ + + D A +FN++ R+ VS+NAMI GY NG++ A F +M
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 120 Q----------------------------------RDLVSWNVMISG-----YVRNKSLS 140
R + N+ ++ Y + ++
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AR LF+M+ R V++WN M+ GY +G AA +FD+M +E N+I++ +++A
Sbjct: 503 MARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACS 562
Query: 197 QNGRIEEACMLFES-KANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVSWN 251
+G ++E F+S K ++ + G V + R+ +A + MP+ ++
Sbjct: 563 HSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVY 622
Query: 252 TMITGYA---QNNYLAE--AQRLFEEAP 274
G +N + E A++LFE P
Sbjct: 623 GAXXGACKIHKNIEVGEKAAKKLFELNP 650
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/699 (37%), Positives = 404/699 (57%), Gaps = 26/699 (3%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N+++ Y+ G +D A VF + + L WN MI GY + A +F MP+RD V
Sbjct: 185 NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEV 244
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML---- 207
SWNT++S ++Q+G+ +F M + N +++ +L+A ++ L
Sbjct: 245 SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI 304
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + ++V N L+ + K L AK +F + D +SWN++ITG +A
Sbjct: 305 LRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDAL 364
Query: 268 RLFEE----APVKDVF---TWTAMVSG--YVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
LF + + V D F T + SG Y G++ I M V NA+I
Sbjct: 365 ILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVG-NAIITM 423
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + D A +F M +N SW MIT +++SG+I AR FD MP+ + ++W +++
Sbjct: 424 YAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSML 483
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+ Y Q+G+SE+ L+L++ M+ G + + FT+ + CA+LA ++LG Q+ K G
Sbjct: 484 STYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLS 543
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
V N+++ MY +CG ++EA + F+ I DKD+ISWN M+A +A++G G + FE M
Sbjct: 544 LNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDM 603
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
KP+ I+ V +LS CSH GLV +G YF SM R +G+ P ++H++CMVDLLGRAG
Sbjct: 604 LKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGL 663
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L++A++L++ MPF+P+A W ALLG+CR++ LAE AA+ + E++ E + YVLLSN+
Sbjct: 664 LEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNM 723
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
Y+ SG +V+ +R M+ +G++ G SW+EV N+VH F+V +T HP+ +Y LEE+
Sbjct: 724 YSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEM 783
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K+ +D Y T E +YHSEKLA A+G+L++P+ PI VMKNLRVC
Sbjct: 784 -MKMIEDTGKYITV-------ESSVHRSKKYHSEKLAFAFGLLNLPSWMPIHVMKNLRVC 835
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+DCH IK +S + R +I+RD RFHHF G CSC DY
Sbjct: 836 DDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 229/465 (49%), Gaps = 27/465 (5%)
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR--DEVSWNT 252
Y G +A +F+ + + +WN+++ V R+ DA+ +FD MPVR D VSW T
Sbjct: 53 YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTT 112
Query: 253 MITGYAQNNYLAEAQRLF--------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD-- 302
MI+GY+QN + + + F + D F++T+++ G + ++R+
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKA---CGSLGDSRLAIQLH 169
Query: 303 AMPEK-----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
A+ K T N+++ YV+ +D+A +F + ++ WN+MI GY+Q
Sbjct: 170 ALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPY 229
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F+RMP+ D +SW +I+ ++Q G+ L +F+EM G N + SVLS CA
Sbjct: 230 KALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACA 289
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ + L+ G LH +++++ GN L+ MY KCG ++ A F+ + + D ISWN+
Sbjct: 290 STSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNS 349
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I G G G+DAL+LF M+ + D+ + IL CS G E +
Sbjct: 350 LITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG-ELLHGYTIKS 408
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ ++ ++ + + G D+A + + MP + +W A++ A G
Sbjct: 409 GMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFSRSGDI----GK 463
Query: 598 AEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
A F+M PE N + + + Y +G + K+ + MR GV+
Sbjct: 464 ARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 202/468 (43%), Gaps = 108/468 (23%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + +++ G D A VF + R S +N+MI GY A Q+F++MP+RD V
Sbjct: 185 NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEV 244
Query: 125 SWNVMIS---------------------GYVRN-----KSLSAARN-------------L 145
SWN +IS G+ N LSA + +
Sbjct: 245 SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI 304
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
M D+V N ++ YA+ G D A+R+F + E + ISWN L+ V G E+A
Sbjct: 305 LRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDAL 364
Query: 206 MLFESKANWEVV-------------------SWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+LF VV S L+ G+ + +G + PV
Sbjct: 365 ILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSA------PVG- 417
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
N +IT YA+ +A +F P+++ +WTAM++ + ++G + +AR FD MPE
Sbjct: 418 ----NAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPE 473
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCK----------- 338
+N V+WN+M++ YVQ + +L+ +M C
Sbjct: 474 RNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQV 533
Query: 339 -----------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
NV+ N+++T Y++ G I A+N FD + D ISW A++A +AQ+G
Sbjct: 534 VTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLG 593
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+ F +M + + N + SVLS C+++ + GK + +V
Sbjct: 594 IKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRV 641
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 153/352 (43%), Gaps = 71/352 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY------------------------ 95
D WN IT + G + AL +FN M RRSSV
Sbjct: 343 DHISWNSLITGVVHFGLGEDALILFNQM-RRSSVVLDEFILPTILGVCSGPDYASTGELL 401
Query: 96 ----------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
NA+I+ Y G D A VF MP R+ +SW MI+ + R+ +
Sbjct: 402 HGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDI 461
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
AR F+MMP+R++V+WN+MLS Y QNG+++ +++ M NG+ ++
Sbjct: 462 GKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRS------NGVQPDWITFT 515
Query: 200 RIEEACM-LFESKANWEVVSW-------------NSLMGGFVKQKRLGDAKWIFDRMPVR 245
AC L K +VV+ NS++ + + + +AK FD + +
Sbjct: 516 TSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDK 575
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF 301
D +SWN M+ +AQN + FE+ + ++ +++SG G V E + F
Sbjct: 576 DLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYF 635
Query: 302 DAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
D+M +S ++ M+ + ++ A++L E M K N W+ ++
Sbjct: 636 DSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALL 687
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 165/377 (43%), Gaps = 57/377 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I + + GC D A VF S+ +S+N++I+G + G + A +F+QM
Sbjct: 312 DLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMR 371
Query: 120 QRDLV---------------------------------------SWNVMISGYVRNKSLS 140
+ +V N +I+ Y +
Sbjct: 372 RSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTD 431
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
A +F +MP R+ +SW M++ ++++G AR FD M E+N ++WN +L+ YVQNG
Sbjct: 432 KADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGF 491
Query: 201 IEEACMLFES-KANWEVVSWNSLMGGFVKQKRLGDAKWIFD------RMPVRDEVSW-NT 252
EE L+ S ++N W + L K + + VS N+
Sbjct: 492 SEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANS 551
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG----KVDEARMIFDAMPEKN 308
++T Y++ + EA+ F+ KD+ +W AM++ + QNG +D + + N
Sbjct: 552 IVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPN 611
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLF 363
+S+ ++++G + + F++MT ++ M+ ++G + A++L
Sbjct: 612 HISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLI 671
Query: 364 DRMP-QHDCISWAAIIA 379
+ MP + + W+A++
Sbjct: 672 EGMPFKPNATVWSALLG 688
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
S + ++LH QL+ G ++ F+ N LL MY CG +A+ F+E +++ +WNTMI
Sbjct: 23 SPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIR 82
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY--- 537
DA LF+ M V +K D ++ ++S S G + E F M RD
Sbjct: 83 ALVSSSRMSDAEKLFDEMP-VRVK-DSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDG 140
Query: 538 GVIPNSKHYTCMVDLLGRAG--RLD-EAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
G + +T ++ G G RL + L+ + F + +++G G +LA
Sbjct: 141 GKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLA 200
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
E V F++ E ++ S +Y S +G +++ R
Sbjct: 201 ET---VFFDI--ERPSLFCWNSMIYGYSQMYGPYKALQIFNR 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 29/277 (10%)
Query: 47 SKSRNKPKPAGDWD------IRQWNVAITTHMRNGCCDSALHVFNSMPRRSS----VSYN 96
S+S + K G +D I WN ++T+++NG + L ++ SM +++
Sbjct: 456 SRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFT 515
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNV-----MISGYVRNKSLSAARNLFEMMPK 151
I + QV + L S NV +++ Y R + A+N F+ +
Sbjct: 516 TSIRACADLAIVKLGMQVVTHATKFGL-SLNVSVANSIVTMYSRCGLIKEAKNTFDSIDD 574
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML 207
+D++SWN ML+ +AQNG F+ ML+ N IS+ +L+ G + E
Sbjct: 575 KDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHY 634
Query: 208 FESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
F+S +S ++ ++ + L AK + + MP + + + + G + ++
Sbjct: 635 FDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHH 694
Query: 263 ---LAE-AQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
LAE A + E V+ + + + Y ++G++D
Sbjct: 695 DLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELD 731
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 276/817 (33%), Positives = 433/817 (52%), Gaps = 101/817 (12%)
Query: 60 DIRQWNVAITTHMRNGCC-DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ----- 113
++ WN + + GCC A+ +F M V N + +LN +DP
Sbjct: 123 NVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEG-VKANVITFLNVLNSVVDPDALRKGKF 181
Query: 114 ----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
V + D+ +++ Y + SL+ AR +F+ MP R V +WN+M+S Y+ +
Sbjct: 182 IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISER 241
Query: 170 ADAARRIFDRMLEKNE----ISWNGLLAAYV-----QNGR-IEEACMLFESKANWEVVSW 219
+ A IF RM ++ E +++ +L A V Q+G+ + E+ + E+ ++
Sbjct: 242 SGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRES--ISETSFELDLFVG 299
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPV 275
+L+ + + + DA +F RM + ++W+ +IT +A + + EA R F +E +
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359
Query: 276 KDVFTWTAMVSGY--------------------------VQNGKV---------DEARMI 300
+ T+ ++++G+ ++N V D+AR +
Sbjct: 360 PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTV 419
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS------------------ 342
FD + N +SWN+MI YVQ +R D A +LF M + +
Sbjct: 420 FDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHG 479
Query: 343 ---------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
+++ YA++GE+ A + M + +W +I GY
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGY 539
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
A G S ++L + +++ +++ F SVL+ C + SL GK +H V+ G ++
Sbjct: 540 ALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV 599
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
V NAL MY KCGS+E A F+ + + +SWN M+ YA+HG ++ L L M+
Sbjct: 600 IVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQE 659
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G+K + IT V +LS+CSH GL+ +G +YF+S+ D G+ ++HY C+VDLLGRAG+L E
Sbjct: 660 GVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQE 719
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A+ + MP EP TW +LLGACR+ + + AA + E++P N+ V+LSN+Y+
Sbjct: 720 AEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSE 779
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
G W + +K+R M R VKKV G S ++V+NKVH F V DT HP IY +EEL F
Sbjct: 780 RGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFA 839
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
+++ G+V TK+VLHDV EE+KE +L YHSEKLA+A+G++S P + + KNLRVCEDC
Sbjct: 840 MREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDC 899
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H A K ISKI GR I++RDN+RFHHF GSCSC DYW
Sbjct: 900 HTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 151/582 (25%), Positives = 270/582 (46%), Gaps = 75/582 (12%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PK-------- 151
G L A F ++ R++VSWNVMIS Y KS A LF M P
Sbjct: 6 GSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVL 65
Query: 152 -------------------------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
++ + +L+ Y + G A+ +F+ M EKN +
Sbjct: 66 NSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVV 125
Query: 187 SWNGLLAAYVQNGRIEEAC----------MLFES-KANWEVVSWNSLMGGFVKQKRLGDA 235
+WN +L Y G C ML E KAN V+++ +++ V L
Sbjct: 126 TWNAMLGVYSLQG----CCWKLAVELFTRMLLEGVKAN--VITFLNVLNSVVDPDALRKG 179
Query: 236 KWIFDRMPVRD-----EVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
K+I VR+ +V NT ++ Y + L +A+++F+ P + V TW +M+S Y
Sbjct: 180 KFIHS--CVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYS 237
Query: 290 QNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVA 341
+ + EA IF M ++ + V++ +++ V + + + + E+++ ++
Sbjct: 238 ISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLF 297
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+IT YA+ A +F RM Q + I+W+AII +A G+ ++LR F M++ G
Sbjct: 298 VGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEG 357
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
NR F S+L+ + LE ++H + + G + + NAL+ +Y +C S ++A
Sbjct: 358 ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDAR 417
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+++ ++ISWN+MI Y + DAL LF +M+ GI+PD + + IL AC+ G
Sbjct: 418 TVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IG 476
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+ + + + G+ + T +V++ +AG LD A+ +++ M E W L
Sbjct: 477 SHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVL 535
Query: 582 LGACRLYGKT-ELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ L+G++ E E ++ E P + ++ + N +S
Sbjct: 536 INGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSS 577
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 229/536 (42%), Gaps = 126/536 (23%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------------------- 270
LGDA F ++ R+ VSWN MI+ Y+ EA LF
Sbjct: 8 LGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNS 67
Query: 271 ------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
E ++ TA+++ Y + G + +A+ +F+ M EKN V+W
Sbjct: 68 CGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTW 127
Query: 313 NAMIAGY-VQTKRMDMARELFEAMTCKNVAS----------------------------- 342
NAM+ Y +Q +A ELF M + V +
Sbjct: 128 NAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVR 187
Query: 343 ---------WNT-MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
NT ++ Y + G +T AR +FD MP +W ++I+ Y+ S S ++
Sbjct: 188 ESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFF 247
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
+F M++ GER +R F S+L C N +L+ GK + + + FE FVG AL+ MY
Sbjct: 248 IFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYA 307
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+C S E+A F + ++I+W+ +I +A HG +AL F M+ GI P+ +T +
Sbjct: 308 RCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFIS 367
Query: 513 ILSACS-----------HTGLVEKGTEYFYSMNR-------------------DYGVIPN 542
+L+ + H + E G + +M D +PN
Sbjct: 368 LLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPN 427
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLGACRL--YGKT-ELAEK 596
+ M+ + + R D+A L + M +PD + +LGAC + +G+T +L +
Sbjct: 428 LISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQ 487
Query: 597 AAEVIFEMEPENAGMYVL---LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
E E G ++ L N+YA +G DV++V L+ D +++T ++ L
Sbjct: 488 CVE-----ESGLGGSPLVQTSLVNMYAKAGEL-DVAEVILQEMDE--QQITAWNVL 535
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY +CGS+ +A AF +I ++V+SWN MI+ Y+ + ++AL LF +M G+ P+ IT
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+V +L++C + G ++++ + G N+ T ++++ G+ G L +AQ++ + M
Sbjct: 61 LVAVLNSCGSFRELRDGI-LVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 570 PFEPDAATWGALLGACRLYG 589
E + TW A+LG L G
Sbjct: 120 A-EKNVVTWNAMLGVYSLQG 138
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + G ++A +F+SMP RS+VS+N M+ Y +G+ + ++ +
Sbjct: 596 DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRK 655
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M Q + K + +++ ++LS + G + F
Sbjct: 656 MEQEGV---------------------------KLNGITFVSVLSSCSHAGLIAEGCQYF 688
Query: 178 -----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE--VVSWNSLMGGFVKQK 230
DR +E + L+ + G+++EA + SK E +V+W SL+G QK
Sbjct: 689 HSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEA-EKYISKMPLEPGIVTWASLLGACRVQK 747
Query: 231 RLGDAK 236
L K
Sbjct: 748 DLDRGK 753
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/754 (35%), Positives = 427/754 (56%), Gaps = 37/754 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ W+ I+ +++NG + AL + M + + ++++++ G L L+ +Q+
Sbjct: 112 DLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIH 171
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNL-------------FEMMPKRDVVSWNTMLS 162
+++S + + + + L+A L ++ D S N +L
Sbjct: 172 RVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLD 231
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV----S 218
YA++G +AA +F + + + +SWN ++A V + + + A L ++ V +
Sbjct: 232 MYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFT 291
Query: 219 WNSLMG-----GFVKQKR-LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+S + G VK R L A D P D +I Y++ L +A+ +F+
Sbjct: 292 LSSALKACAAIGLVKLGRQLHSALMKMDMEP--DSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
P KDV W +++SGY G EA +F M ++ ++ +++ A
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 333 EAMTCKNVASW--------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
E + ++ S N+++ Y + + A +F+ P D +++ ++I Y+Q
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G E++L++++ M+ + + F+S+ + CANL++ E GKQ+H ++K G + F G
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
N+L+ MY KCGS+++A F EI + ++SW+ MI G A+HG G+ AL LF M GI
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGIL 589
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
P+ IT+V +LSAC+H GLV + +F M + +G+ P +HY CMVD+LGR GRLDEA
Sbjct: 590 PNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMV 649
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
L+K MPF+ AA WGALLGA R++ EL AAE++ +EPE +G ++LL+N+YA++G
Sbjct: 650 LVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGM 709
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W +V+KVR M++ VKK G SW+E+++KV+TF VGD HP IY L++L +L
Sbjct: 710 WDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTS 769
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
G+V + LHDV + EKE +L +HSEKLAVA+G+++ P G PIRV KNLRVC DCH A
Sbjct: 770 AGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTA 829
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISK+ R II+RD NRFHHF GSCSCGDYW
Sbjct: 830 FKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 246/520 (47%), Gaps = 68/520 (13%)
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM------LFESKANWEVVSWNSLMGGF 226
AR++ E + +SW+ L++ YVQNGR EEA + L +K N +++S++ G
Sbjct: 101 ARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE--FTFSSVLKGC 158
Query: 227 VKQKRLGDAKWIFDRMPVRD---------EVSWNTMI---TGYAQNNYLAEAQ-RLFEEA 273
+ L K I V + E S +T++ G NY + L +
Sbjct: 159 SLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLG 218
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
D F+ A++ Y ++G + A +F +P+ + VSWNA+IAG V ++ D+A +L
Sbjct: 219 YDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLG 278
Query: 334 AMTCKNVA-SWNT--------------------------------------MITGYAQSG 354
M VA S T +I Y++ G
Sbjct: 279 KMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCG 338
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ AR +FD MP D I W +II+GY+ GY +++ LF M + G N++ +++L
Sbjct: 339 LLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILK 398
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
+ A + +Q+H +K G++ +V N+LL Y KC +E+A FE +D+++
Sbjct: 399 STAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVA 458
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
+ +MI Y+++G G++AL ++ M+ IKPD + +AC++ E+G + +
Sbjct: 459 YTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVL 518
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ G++ + +V++ + G +D+A + + + +W A++G +G
Sbjct: 519 K-CGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGGLAQHGH---G 573
Query: 595 EKAAEVIFEMEPENAGM--YVLLSNLYAASGRWGDVSKVR 632
KA ++ ++M +N + ++ L ++ +A G V++ R
Sbjct: 574 RKALQLFYQM-LKNGILPNHITLVSVLSACNHAGLVTEAR 612
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 196/410 (47%), Gaps = 79/410 (19%)
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSW 312
Y++ A++L ++ D+ +W+A++SGYVQNG+ +EA + + M + N ++
Sbjct: 92 YSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTF 151
Query: 313 NAMIAGYVQTKRMDMAREL------------------FEAMTCKNVA------------- 341
++++ G T+ +++ +++ F T N
Sbjct: 152 SSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVH 211
Query: 342 -------------SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
S N ++ YA+SG A +F +P+ D +SW A+IAG ++
Sbjct: 212 GYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKND 271
Query: 389 DSLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+L+L +M Y R+ S FT S L CA + ++LG+QLH L+K+ E FVG
Sbjct: 272 LALKLLGKMGSY--RVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVG 329
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG +++A F+ + KDVI WN++I+GY+ G+ +A+ LF +M G++ +
Sbjct: 330 LIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFN 389
Query: 507 DITMVGILSACS-----------HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
T+ IL + + HT ++ G +Y G + NS ++D G+
Sbjct: 390 QTTLSTILKSTAGSQANGFCEQVHTISIKSGYQY-------DGYVANS-----LLDSYGK 437
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
L++A + + P E D + +++ A YG L E+A ++ M+
Sbjct: 438 CCLLEDAAKVFEVCPAE-DLVAYTSMITAYSQYG---LGEEALKMYLRMQ 483
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/568 (41%), Positives = 361/568 (63%), Gaps = 1/568 (0%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP-RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
W + ++ ++R G A + + MP + + YN MISGY NG+ + A + +MP D
Sbjct: 107 WTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPD 166
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
+VSWN ++ G +RN+ +S + F+ MP +D+VSWN ML GY + G D A F R+
Sbjct: 167 IVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPS 226
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
N ISW L+ Y Q GR+ EA LF+ VV+WN L+ G+V+ ++ A +F M
Sbjct: 227 PNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEM 286
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
P ++ +SW TM++G+ ++ L EA+ + + P +V TA++ GY+++ +D+AR +FD
Sbjct: 287 PEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFD 346
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
+ ++ V WN MI+GYVQ +D A LF+ M K++ SWNTMI G AQ G+I A ++
Sbjct: 347 GIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASI 406
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F +M + + +SW +II+G+ Q+G ++L+ F+ M+R + + + LS ANLA+L
Sbjct: 407 FRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATL 466
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
++G+Q H LV+ GF + GNAL+ Y KCG + EA F+E+V +D++SWN +I GY
Sbjct: 467 QIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGY 526
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A +G G + + +F M+ ++PD+IT+V +LSACSH GL+++G +F SM + Y + P
Sbjct: 527 ASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPV 586
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
++HYTCMVDLLGRAGRL EA L++ M +P+A WGALLGACR++ E+A AAE +F
Sbjct: 587 AEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLF 646
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSK 630
E+EP A YVLLSN+ +G+W D K
Sbjct: 647 ELEPCKASNYVLLSNICVEAGKWDDADK 674
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 307/582 (52%), Gaps = 53/582 (9%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N +T+ R+G +A +F MPRR+ VSYNAM+S +G+L AR++FD+MP+R+ V
Sbjct: 15 NQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPV 74
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML-EK 183
SWN M+ ++ + AR LF+ MP R+ SW M+S Y + G AR + DRM EK
Sbjct: 75 SWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEK 134
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+N +++ Y +NGR E+A L + ++VSWNS++GG ++ + + + FD MP
Sbjct: 135 CAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMP 194
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+D VSWN M+ GY + L A F P +V +W +V+GY Q G++ EAR +FD
Sbjct: 195 DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDR 254
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
MPE+N V+WN +++GYVQ +++ A LF M KN SW TM++G+ +SG++ A+++
Sbjct: 255 MPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVL 314
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
+MP + + A++ GY +S +D+ +LF
Sbjct: 315 SKMPSDNVGAKTALMHGYLKSNLIDDARQLF----------------------------- 345
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G +V+ +A C+ N ++ Y +CG ++EA F+++ +KD+ISWNTMIAG A
Sbjct: 346 -----DGIVVR---DAVCW--NTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCA 395
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+ G + A +F MK + + ++ I+S GL + ++F M RD
Sbjct: 396 QGGQIRKAASIFRKMK----RRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWC 451
Query: 544 KHYTCMVDLLGRA----GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ C+ A GR + +L+ F D++ AL+ A Y K +A +
Sbjct: 452 TYACCLSASANLATLQIGR--QFHSLLVRTGFISDSSPGNALISA---YAKCGRMLEARQ 506
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
V EM ++ + L + YA++G +V V +M V+
Sbjct: 507 VFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVR 548
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 224/422 (53%), Gaps = 43/422 (10%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P P DI WN + +RN ++ F+ MP + VS+N M+ GY+ G LD A
Sbjct: 163 PAP----DIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVAS 218
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
F ++P +++SW +++GY + + AR LF+ MP+R+VV+WN +LSGY Q +A
Sbjct: 219 AFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEA 278
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
A +F M EKN ISW +++ +V++G+++EA + + V + +LM G++K +
Sbjct: 279 AYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLI 338
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
DA+ +FD + VRD V WNTMI+GY Q L EA LF++ P KD+ +W M++G Q G
Sbjct: 339 DDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGG 398
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--------MDMARELFEAMTCK------ 338
++ +A IF M +NTVSWN++I+G+VQ M M R+ A C
Sbjct: 399 QIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLS 458
Query: 339 ---NVASW----------------------NTMITGYAQSGEITHARNLFDRMPQHDCIS 373
N+A+ N +I+ YA+ G + AR +FD M D +S
Sbjct: 459 ASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVS 518
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I GYA +G + + +F EM+ R + VLS C++ ++ G ++
Sbjct: 519 WNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMI 578
Query: 434 KV 435
K+
Sbjct: 579 KL 580
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 51/368 (13%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
VF ++ ++G++ AR +F+ MP +N VS+NAM++ R+ AR LF+ M
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N SWNTM+ +Q G + AR LFD MP + SW +++ Y ++G E+
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAG----------EL 120
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
E L+R P G++ A C+ N ++ Y K G
Sbjct: 121 TLARELLDRMP----------------GEKC----------AACY--NTMISGYAKNGRF 152
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E+A +E+ D++SWN+++ G R+ ++ F+ M + ++ + G + A
Sbjct: 153 EDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRA- 211
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
G ++ + +F + PN + +V+ +AGR+ EA+ L MP E +
Sbjct: 212 ---GDLDVASAFFSRIPS-----PNVISWVNLVNGYCQAGRMGEARELFDRMP-ERNVVA 262
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
W LL Y + E A + EM +N+ + + + + SG+ + V KM
Sbjct: 263 WNVLLSG---YVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPS 319
Query: 638 RGVKKVTG 645
V T
Sbjct: 320 DNVGAKTA 327
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/582 (40%), Positives = 368/582 (63%), Gaps = 8/582 (1%)
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR---DEVSWNTMITGYAQN 260
A +F S N V WN ++ G ++ +L A + + RM + ++ ++ T+ +
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVA 145
Query: 261 NYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
+ E +++ + DV +A + Y G++++AR +F + E + V WN MI
Sbjct: 146 QAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMI 204
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
GY++ ++ A+ LF M KN+ SWN MI G A+ G + AR LFD M + D ISW++
Sbjct: 205 DGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSS 264
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
++ GY +G +++L +F +M+R R R +SVL+ C+N+ +++ G+ +H L +
Sbjct: 265 MVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNS 324
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ +G ALL MY KCG ++ + FEE+ ++++ +WN MI G A HG +DAL LF
Sbjct: 325 IKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFS 384
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
++ +KP+ IT+VG+L+AC+H G V+KG F +M YGV P +HY CMVDLLGR+
Sbjct: 385 KLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRS 444
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G EA++L+ +MP +P+AA WGALLGACR++G +LAE+ +++ E+EP+N+G YVLLS
Sbjct: 445 GLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLS 504
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+YA GR+ DVSK+R M++RG+K V G S +++ VH F +GD HP+ IY L+
Sbjct: 505 NIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
++ +L+ G T VL D+ EEEKE + YHSEKLA+A+G+++ G+ I ++KNLR
Sbjct: 565 IIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLR 624
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC+DCH+A K IS+I R II+RD R+HHF G+CSC D+W
Sbjct: 625 VCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 226/517 (43%), Gaps = 69/517 (13%)
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDP-------ARQVFDQMPQRDLVSWNVMISGY 133
L +++ RS + +SG LL +P A +VF +P ++ WN++I G
Sbjct: 49 LTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGC 108
Query: 134 VRNKSLSAARNLFEMM---PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN-----E 185
+ N L A + M + + ++ T+ + R+I +++
Sbjct: 109 LENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVH 168
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
I G + Y GR+E+A +F S + +VV WN+++ G++K L AK +F +MPV+
Sbjct: 169 IKSAG-IQMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVK 226
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ SWN MI G A+ L +A++LF+E +D +W++MV GY+ G+ EA IF M
Sbjct: 227 NIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQ 286
Query: 306 EKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEIT 357
+ T ++++A +D R + + ++ ++ YA+ G +
Sbjct: 287 REETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLD 346
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+F+ M + + +W A+I G A G +ED+L LF +++ + N VL+ CA
Sbjct: 347 MGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACA 406
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ AG FV L + ++ E Y VD ++ +
Sbjct: 407 H--------------------AG-FVDKGLRIFQ----TMREFYG-----VDPELEHYGC 436
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG---LVEKGTEYFYSMN 534
M+ R G +A L SM +KP+ +L AC G L E+ + +
Sbjct: 437 MVDLLGRSGLFSEAEDLINSMP---MKPNAAVWGALLGACRIHGNFDLAERVGKILLELE 493
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEA---QNLMKN 568
NS Y + ++ + GR D+ + LMKN
Sbjct: 494 PQ-----NSGRYVLLSNIYAKVGRFDDVSKIRKLMKN 525
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 26/345 (7%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA-----RQVFDQMPQRDLVSWNVMISG 132
D AL VF+S+P + +N +I G L N +L A R V D P + ++ +
Sbjct: 84 DFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNK--FTYPTLFKA 141
Query: 133 YVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+++ R + + K DV + + YA G + AR++F E + + W
Sbjct: 142 CSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSG-ESDVVCW 200
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N ++ Y++ G +E A LF + SWN ++ G K LGDA+ +FD M RDE+
Sbjct: 201 NTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI 260
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
SW++M+ GY EA +F++ ++ F +++++ G +D+ R + A
Sbjct: 261 SWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWV-HAY 319
Query: 305 PEKNTVSWNAMIAG-----YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
++N++ +A++ Y + R+DM E+FE M + + +WN MI G A G A
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDA 379
Query: 360 RNLFDRMPQ----HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
LF ++ + + I+ ++ A +G+ + LR+F M+ +
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREF 424
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 166/366 (45%), Gaps = 27/366 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N MI GYL G L+ A+ +F QMP +++ SWNVMI+G + +L AR LF+ M +R
Sbjct: 198 VCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSER 257
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA---- 204
D +SW++M+ GY G A IF +M + + +LAA G I++
Sbjct: 258 DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVH 317
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW-IFDRMPVRDEVSWNTMITGYAQNNYL 263
L + + V +L+ + K RL D W +F+ M R+ +WN MI G A +
Sbjct: 318 AYLKRNSIKLDAVLGTALLDMYAKCGRL-DMGWEVFEEMKEREIFTWNAMIGGLAIHGRA 376
Query: 264 AEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNA 314
+A LF +E +K + T +++ G VD+ IF M E V +
Sbjct: 377 EDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGC 436
Query: 315 MIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHA----RNLFDRMPQH 369
M+ ++ A +L +M K N A W ++ G A + L + PQ+
Sbjct: 437 MVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQN 496
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ + YA+ G +D ++ MK G + P S++ + ++G H
Sbjct: 497 SG-RYVLLSNIYAKVGRFDDVSKIRKLMKNRG--IKTVPGVSIVDLNGTVHEFKMGDGSH 553
Query: 430 GQLVKV 435
Q+ ++
Sbjct: 554 PQMKEI 559
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 142/297 (47%), Gaps = 24/297 (8%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
+G+ D+ WN I +++ G ++A +F MP ++ S+N MI+G G L AR++F
Sbjct: 192 SGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLF 251
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGY 169
D+M +RD +SW+ M+ GY+ A +F+ M P R ++S ++L+ + G
Sbjct: 252 DEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILS--SVLAACSNIGA 309
Query: 170 ADAARRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
D R + L++N I + LL Y + GR++ +FE E+ +WN+++G
Sbjct: 310 IDQGRWV-HAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIG 368
Query: 225 GFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEE-----APV 275
G R DA +F ++ + ++ ++T A ++ + R+F+
Sbjct: 369 GLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVD 428
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMAREL 331
++ + MV ++G EA + ++MP K N W A++ D+A +
Sbjct: 429 PELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV 485
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 9/223 (4%)
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK--CGSVEEAYHAFEEIVDKDVISW 475
++ SL+ QLH +++ G +V ALL Y + + A F I + +V W
Sbjct: 42 SITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N +I G + A+ + M + +P+ T + ACS V++G + +
Sbjct: 102 NIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQ-IHGHVV 159
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+G+ + + + + GRL++A+ + + E D W ++ Y K + E
Sbjct: 160 KHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSG--ESDVVCWNTMIDG---YLKCGVLE 214
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
A + +M +N G + ++ N A G GD K+ +M +R
Sbjct: 215 AAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSER 257
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/607 (41%), Positives = 369/607 (60%), Gaps = 22/607 (3%)
Query: 73 RNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVFDQMPQ-----RDL 123
+ G ALH+ M S +Y++++ G L L A+ + M Q +D+
Sbjct: 41 KQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDI 100
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM--- 180
N ++S YV+ SL AR +F+ MP ++VVSW M++ YA++ + A F M
Sbjct: 101 SLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDV 160
Query: 181 -LEKNEISWNGLLAAYVQN---GRIEEACML--FESKANWEVVSWNSLMGGFVKQKRLGD 234
++ N ++ +L A G + + FES V N L+ + K+ +
Sbjct: 161 GIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESN----VFVGNGLVDMYAKRGCIEF 216
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
A+ +FD+MP RD VSWN MI GY QN + +A +LF+E P +DV TW M++GY Q G V
Sbjct: 217 ARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDV 276
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
+ A +F+ MPE+N VSWN MIAGYVQ + A +LF+ M +NV SWN +I+G+AQ+G
Sbjct: 277 ENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNG 336
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
++ A LF MP+ + +SW A+IAGY+Q+G +E++L+LF +M+ + N F VL
Sbjct: 337 QVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLP 396
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA LA LE G + H +++ GF++ VGN L+ MY KCGS+E+A F+ + +D S
Sbjct: 397 ACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSAS 456
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
+ MI GYA +G K++L LFE M+ G+KPD +T VG+LSAC H GLV++G +YF M
Sbjct: 457 LSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMT 516
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
R Y + P +HY CM+DLLGRAG DEA +L+ MP +PDA WG+LL ACR + +L
Sbjct: 517 RFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLG 576
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
EK A+ + + P+N YVLLSN+YAA+GRW D+ VR +M+DR VKK G SW+ ++ +
Sbjct: 577 EKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQ 636
Query: 655 VHTFSVG 661
VH F VG
Sbjct: 637 VHAFLVG 643
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 271/593 (45%), Gaps = 94/593 (15%)
Query: 26 LQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFN 85
LQ N P K L H+ DI N ++ +++ G A VF+
Sbjct: 71 LQGCLNAKSLPDAKLLHAHMIQTQFECQ------DISLGNKLVSIYVKLGSLVEARRVFD 124
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-------------------------- 119
MP ++ VS+ AMI+ Y + A F +M
Sbjct: 125 EMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE 184
Query: 120 ----------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ ++ N ++ Y + + AR LF+ MP+RDVVSWN M++GY QNG
Sbjct: 185 FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGL 244
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
+ A ++F + +++ I+WN ++A Y Q G +E A LFE +VSWN+++ G+V+
Sbjct: 245 IEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQN 304
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
+ +A +F MP R+ +SWN +I+G+AQN + EA +LF+ P +V +W AM++GY
Sbjct: 305 GSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYS 364
Query: 290 QNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVA 341
QNG+ + A +F M + NT ++ ++ ++ E E + +V
Sbjct: 365 QNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVL 424
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
NT++ YA+ G I AR +FDRM Q D S +A+I GYA +G S++SL LF +M+ G
Sbjct: 425 VGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTG 484
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ +R F VLS C + ++ G+Q + + Y
Sbjct: 485 LKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRF-------------------------Y 519
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC---S 518
H + + + MI R G +A L M IKPD +LSAC +
Sbjct: 520 H-----ITPAMEHYGCMIDLLGRAGCFDEANDLINKMP---IKPDADMWGSLLSACRTHN 571
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE---AQNLMKN 568
+ L EK ++ ++N N Y + ++ AGR D+ +N MK+
Sbjct: 572 NIDLGEKVAQHLIALNPQ-----NPAPYVLLSNIYAAAGRWDDIGSVRNRMKD 619
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 124/254 (48%), Gaps = 12/254 (4%)
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++ + G ++L + +M G + S + S+L C N SL K LH +++
Sbjct: 34 GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93
Query: 436 GFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
FE +GN L+ +Y K GS+ EA F+E+ K+V+SW MIA YARH G++AL
Sbjct: 94 QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGF 153
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F M+ VGI+P+ T IL AC+ ++ + F+ G N +VD+
Sbjct: 154 FYEMQDVGIQPNHFTFASILPACTDLEVLGE----FHDEIVKGGFESNVFVGNGLVDMYA 209
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
+ G ++ A+ L MP + D +W A++ Y + L E A ++ E+ + +
Sbjct: 210 KRGCIEFARELFDKMP-QRDVVSWNAMIAG---YVQNGLIEDALKLFQEIPKRDV---IT 262
Query: 615 LSNLYAASGRWGDV 628
+ + A + GDV
Sbjct: 263 WNTMMAGYAQCGDV 276
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/815 (33%), Positives = 427/815 (52%), Gaps = 132/815 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN----------KSLSAARNL 145
A++ Y + G + +R+VF++MP R++VSW ++ GY K S R +
Sbjct: 213 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQI 272
Query: 146 FEMMPKRDVVS----WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
+ K + S N+++S G D A IFD+M E++ ISWN + AAY QNG I
Sbjct: 273 IGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI 332
Query: 202 EEACMLFE------SKANWEVVS-------------W--------------------NSL 222
EE+ +F + N VS W N+L
Sbjct: 333 EESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTL 392
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN--------------------NY 262
+ + R +A +F +MP +D +SWN+++ + + NY
Sbjct: 393 LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 452
Query: 263 LAEAQRL--------FEEA-------PVKDVF----TWTAMVSGYVQNGKVDEARMIFDA 303
+ L FE+ V +F A+VS Y + G++ E+R +
Sbjct: 453 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 512
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS--------------------- 342
MP ++ V+WNA+I GY + + D A F+ M + V+S
Sbjct: 513 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 572
Query: 343 -------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
N++IT YA+ G+++ +++LF+ + + I+W A++A A
Sbjct: 573 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 632
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G+ E+ L+L +M+ +G L++ F+ LS A LA LE G+QLHG VK+GFE F+
Sbjct: 633 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 692
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
NA MY KCG + E V++ + SWN +I+ RHG+ ++ F M +GI
Sbjct: 693 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 752
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
KP +T V +L+ACSH GLV+KG Y+ + RD+G+ P +H C++DLLGR+GRL EA+
Sbjct: 753 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 812
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ MP +P+ W +LL +C+++G + KAAE + ++EPE+ +YVL SN++A +G
Sbjct: 813 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 872
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW DV VR +M + +KK SW+++++KV +F +GD HP+ IYA LE+++ +K
Sbjct: 873 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 932
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+V T L D EE+KEH L HSE+LA+AY ++S P G +R+ KNLR+C DCH+
Sbjct: 933 ESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHS 992
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K +S+++GR I+LRD RFHHF G CSC DYW
Sbjct: 993 VYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 222/468 (47%), Gaps = 60/468 (12%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----- 270
V+ N+L+ + K R+ A+ +FD MPVR+EVSWNTM++G + E F
Sbjct: 107 VLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCD 166
Query: 271 -----------------------------------EEAPVKDVFTWTAMVSGYVQNGKVD 295
+ + DV+ TA++ Y G V
Sbjct: 167 LGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVS 226
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQT----------KRMDMARELFEAMTCKNVAS--- 342
+R +F+ MP++N VSW +++ GY K + R++ + + S
Sbjct: 227 CSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLA 286
Query: 343 -WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N++I+ G + +A +FD+M + D ISW +I A YAQ+G+ E+S R+F M+R+
Sbjct: 287 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 346
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ +N + +++LS ++ + G+ +HG +VK+GF++ V N LL MY G EA
Sbjct: 347 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 406
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+++ KD+ISWN+++A + G DAL L SM + G + +T L+AC
Sbjct: 407 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 466
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
EKG + + G+ N +V + G+ G + E++ ++ MP D W AL
Sbjct: 467 FFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 524
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPEN-AGMYVLLSNLYAASGRWGDV 628
+G Y + E +KA M E + Y+ + ++ +A GD+
Sbjct: 525 IGG---YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 569
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 116/292 (39%), Gaps = 52/292 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ + + G + V MPRR V++NA+I GY + D A F M +
Sbjct: 491 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 550
Query: 125 S----------------------------------------WNVMISGYVRNKSLSAARN 144
S N +I+ Y + LS++++
Sbjct: 551 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 610
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGR 200
LF + R++++WN ML+ A +G+ + ++ +M + ++ S++ L+A +
Sbjct: 611 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 670
Query: 201 IEEACML--FESKANWEVVS--WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+EE L K +E S +N+ + K +G+ + R SWN +I+
Sbjct: 671 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 730
Query: 257 YAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
++ Y E F E + T+ ++++ G VD+ +D +
Sbjct: 731 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 782
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/570 (43%), Positives = 346/570 (60%), Gaps = 42/570 (7%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
++I YAQN L A+ +F+++ ++D ++TA+++GY G +DEAR +FD +P ++ V
Sbjct: 167 TSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVV 226
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM-----------------TCKN----------VASW 343
SWNAMI+GY Q+ R++ A FE M C V SW
Sbjct: 227 SWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSW 286
Query: 344 -------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
N +I Y + G++ A NLF+++ + +SW +I GY +++
Sbjct: 287 IEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEA 346
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAGCFVGNALL 448
L LF M + N F S+L CANL +L+LGK +H + K + + +L+
Sbjct: 347 LGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLI 406
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG + A F+ + K + +WN MI+G+A HG AL LF M + G PDDI
Sbjct: 407 DMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDI 466
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T VG+L+AC H GL+ G YF SM +DY V P HY CM+DL GRAG DEA+ L+KN
Sbjct: 467 TFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKN 526
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
M +PD A W +LLGACR++ + ELAE A+ +FE+EPEN YVLLSN+YA +GRW DV
Sbjct: 527 MEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDV 586
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+K+R ++ D +KKV G S +EV + VH F VGD +HP+ + IY L+E++ +L++ GFV
Sbjct: 587 AKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFV 646
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T VL+D+ EE KE +L +HSEKLA+A+G++S G IR+MKNLRVC +CH+A K I
Sbjct: 647 PDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLI 706
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKI R II RD NRFHHF GSCSC DYW
Sbjct: 707 SKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 197/398 (49%), Gaps = 35/398 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I + +NG +A VF+ R +VS+ A+I+GY G LD AR++FD++P RD+VSWN
Sbjct: 170 INMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWN 229
Query: 128 VMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNG----YADAARR-IFD 178
MISGY ++ + A FE M + +V + ++LS AQ+G + R I D
Sbjct: 230 AMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIED 289
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
R L N NGL+ YV+ G +EEA LFE + VVSWN ++GG+ +A +
Sbjct: 290 RGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGL 349
Query: 239 FDRMPVR----DEVSWNTMITGYAQNNYLAEAQ--RLFEEAPVKD----VFTWTAMVSGY 288
F RM ++V++ +++ A L + + + +K V WT+++ Y
Sbjct: 350 FRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMY 409
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWN 344
+ G + A+ IFD M K+ +WNAMI+G+ D A LF MT + ++
Sbjct: 410 AKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFV 469
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLF--IEM 397
++T +G ++ R F M Q +S + +I + ++G +++ L +EM
Sbjct: 470 GVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEM 529
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
K G + + S+L C +EL + + L ++
Sbjct: 530 KPDG-----AIWCSLLGACRIHRRIELAESVAKHLFEL 562
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 32/262 (12%)
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++++A +LF + + + W +I G + S +L ++ M G N F S+
Sbjct: 76 GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS----------------- 456
+C + GKQ+H ++K+G E FV +L+ MY + G
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195
Query: 457 --------------VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
++EA F+EI +DV+SWN MI+GYA+ G ++A+ FE M+
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+ P+ TM+ +LSAC+ +G + + S D G+ N + ++D+ + G L+EA
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEA 315
Query: 563 QNLMKNMPFEPDAATWGALLGA 584
NL + + + + +W ++G
Sbjct: 316 SNLFEKIQ-DKNVVSWNVMIGG 336
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 184/437 (42%), Gaps = 69/437 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D + IT + G D A +F+ +P R VS+NAMISGY +G+++ A F++M
Sbjct: 193 DAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMR 252
Query: 120 QRDLV---------------------------SW-------------NVMISGYVRNKSL 139
+ + SW N +I YV+ L
Sbjct: 253 RAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDL 312
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAY 195
A NLFE + ++VVSWN M+ GY A +F RM++ N++++ +L A
Sbjct: 313 EEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPAC 372
Query: 196 VQNGRIEEACML-------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
G ++ + +S N V W SL+ + K L AK IFD M +
Sbjct: 373 ANLGALDLGKWVHAYVDKNMKSMKN-TVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLA 431
Query: 249 SWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+WN MI+G+A + + A LF E V D T+ +++ G + R F +M
Sbjct: 432 TWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSM 491
Query: 305 PEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEI-- 356
+ VS + MI + + D A L + M K + A W +++ I
Sbjct: 492 IQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIEL 551
Query: 357 --THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ A++LF+ P++ ++ + YA +G ED + I + R+ + P S +
Sbjct: 552 AESVAKHLFELEPENPS-AYVLLSNIYAGAGRWEDVAK--IRTRLNDNRMKKVPGCSSIE 608
Query: 415 TCANLASLELGKQLHGQ 431
+ + +G ++H Q
Sbjct: 609 VDSVVHEFLVGDKVHPQ 625
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 46/271 (16%)
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC---GSVEEAYHAF 464
P ++LS C L +L KQ+H Q++K G F + L+ +C G + A F
Sbjct: 30 PSLTLLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSK-LIEFCAVSPHGDLSYALSLF 85
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS------ 518
+ I + + + WN MI G + AL + M + G +P++ T I +C+
Sbjct: 86 KTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAH 145
Query: 519 -----HTGLVEKGTEY----------FYSMNR---------DYGVIPNSKHYTCMVDLLG 554
H +++ G E+ Y+ N D + ++ +T ++
Sbjct: 146 EGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYA 205
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME-----PENA 609
G LDEA+ L +P D +W A++ Y ++ E+A EM P +
Sbjct: 206 SKGFLDEARELFDEIPVR-DVVSWNAMISG---YAQSGRVEEAMAFFEEMRRAKVTPNVS 261
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
M +LS + + VR + DRG+
Sbjct: 262 TMLSVLSACAQSGSSLQLGNWVRSWIEDRGL 292
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/604 (42%), Positives = 377/604 (62%), Gaps = 22/604 (3%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
N ++ Y + G I A +F+ ++E V WN+++ G+ K + G A+W+FD MP R+
Sbjct: 134 NAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERN 193
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP- 305
++W M+TGYA+ L A+R F+ P + V +W AM+SGY QNG +EA +FD M
Sbjct: 194 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVN 253
Query: 306 ---EKNTVSWNAMIAGYVQTKRMD------MARELFEAMTCKNVASWNTMITGYAQSGEI 356
E + +W +I+ + R D + R L + N ++ YA+ G++
Sbjct: 254 AGIEPDETTWVTVISAC--SSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDL 311
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT--SVLS 414
AR LF+ MP + ++W ++IAGYAQ+G S ++ LF EM ++L T SV+S
Sbjct: 312 DSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMIT-AKKLTPDEVTMVSVIS 370
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
C +L +LELG + L + + NA++ MY +CGS+E+A F+E+ +DV+S
Sbjct: 371 ACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVS 430
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
+NT+I+G+A HG G +A+ L +MK GI+PD +T +G+L+ACSH GL+E+G + F S+
Sbjct: 431 YNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK 490
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
P HY CMVDLLGR G L++A+ M+ MP EP A +G+LL A R++ + EL
Sbjct: 491 D-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELG 545
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
E AA +FE+EP+N+G ++LLSN+YA++GRW DV ++R M+ GVKK TG+SW+E K
Sbjct: 546 ELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGK 605
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
+H F V D H D IY L EL K+++ G++ VL DV EEEKE ++ HSEKL
Sbjct: 606 LHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKL 665
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+ Y +L AG IRV+KNLRVC DCH AIK ISK+ GR+II+RDNNRFH F+ G CSC
Sbjct: 666 AICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSC 725
Query: 775 GDYW 778
DYW
Sbjct: 726 KDYW 729
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 188/360 (52%), Gaps = 29/360 (8%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
N I + R G A VF+ +P R +NAM+SGY A+ +FD MP+R+
Sbjct: 134 NAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERN 193
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-- 180
+++W M++GY + K L AAR F+ MP+R VVSWN MLSGYAQNG A+ A R+FD M
Sbjct: 194 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVN 253
Query: 181 --LEKNEISWNGLLAAYVQNGRIEEACM-------LFESKANWEVVSWNSLMGGFVKQKR 231
+E +E +W +++A G + C+ L + + +L+ + K
Sbjct: 254 AGIEPDETTWVTVISACSSRG---DPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGD 310
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-----APVKDVFTWTAMVS 286
L A+ +F+ MP R+ V+WN+MI GYAQN A A LF+E D T +++S
Sbjct: 311 LDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVIS 370
Query: 287 GYVQNGKVDEARMIFDAMPE---KNTVS-WNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G ++ + + E K ++S NAMI Y + M+ A+ +F+ M ++V S
Sbjct: 371 ACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVS 430
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+NT+I+G+A G A NL M + D +++ ++ + +G E+ ++F +K
Sbjct: 431 YNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK 490
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 168/366 (45%), Gaps = 54/366 (14%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
P + + WN ++ + + A +F+ MP R+ +++ AM++GY L+ AR+
Sbjct: 157 PDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRY 216
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSG------- 163
FD MP+R +VSWN M+SGY +N A LF+ M + D +W T++S
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276
Query: 164 ----------------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAY 195
YA+ G D+AR++F+ M +N ++WN ++A Y
Sbjct: 277 CLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGY 336
Query: 196 VQNGRIEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
QNG+ A LF+ K + V+ S++ L W+ R +++
Sbjct: 337 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVV-RFLTENQIKL 395
Query: 251 -----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
N MI Y++ + +A+R+F+E +DV ++ ++SG+ +G EA + M
Sbjct: 396 SISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMK 455
Query: 306 ----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
E + V++ ++ ++ R++FE++ + + M+ + GE+ A+
Sbjct: 456 EGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKR 515
Query: 362 LFDRMP 367
+RMP
Sbjct: 516 TMERMP 521
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 69/259 (26%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD--------------- 469
G H ++K+G + FV NA++ MY + G + A F+EI D
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 470 ------------------KDVISW-------------------------------NTMIA 480
++VI+W N M++
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYA++G ++AL LF+ M GI+PD+ T V ++SACS G ++++ +
Sbjct: 234 GYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKR-IQ 292
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA-EKAAE 599
N T ++D+ + G LD A+ L MP + TW +++ G++ +A E E
Sbjct: 293 LNCFVRTALLDMYAKFGDLDSARKLFNTMPGR-NVVTWNSMIAGYAQNGQSAMAIELFKE 351
Query: 600 VIF--EMEPENAGMYVLLS 616
+I ++ P+ M ++S
Sbjct: 352 MITAKKLTPDEVTMVSVIS 370
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH--AFEEIV 468
S+ S N L +QLH Q++ + ALL+ +C Y F +
Sbjct: 6 SIASRVGNFNHL---RQLHAQIIHNSLHHHNY-WVALLINHCTRLRAPPHYTHLLFNSTL 61
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ +V + +M+ Y+ ++++E M+ G++PD ++ + G+
Sbjct: 62 NPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI------ 115
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP-FEPDAATWGALLGACRL 587
F++ G ++ ++D+ R G + A+ + +P +E A W A++
Sbjct: 116 GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSG--- 172
Query: 588 YGKTELAEKAAEVIFEMEPE 607
Y K E +E A+ +F++ PE
Sbjct: 173 YWKWE-SEGQAQWLFDVMPE 191
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/823 (33%), Positives = 430/823 (52%), Gaps = 104/823 (12%)
Query: 28 SPANTNPY----PSKKTLKRHLNSKSRNKPKPAGDWDIRQW--NVAITTHMRNGCCDSAL 81
+P+ + P+ P+ + S+ P +D+ + N+ + + + +G A
Sbjct: 218 TPSTSPPWKEYAPAAPGVVPLKQPSSQAAPAGVTGFDVLTYRLNLGLRSLLSSGHLHRAR 277
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
+F+ MP ++ S N ++S Y +G L A+ +F P R+ +W +M+ + S
Sbjct: 278 AMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSD 337
Query: 142 ARNLFEMM------PKRDVVS----------------------------WNTMLSGYAQN 167
A +LF M P R V+ NT+L Y ++
Sbjct: 338 ALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKH 397
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF------------------- 208
G AARR+F M +K+ +++N ++ + G +A LF
Sbjct: 398 GLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYS 457
Query: 209 ----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
S + V NSL+ + K L D + +FD MP RD VS+N +I YA N A
Sbjct: 458 HSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAA 517
Query: 265 EAQRLFEEAPV----KDVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
RLF E + V + M+S V GK A+++ + ++ + NA+
Sbjct: 518 TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG-NAL 576
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
I Y + +D A+ F + K+ SW +ITGY Q+G QH
Sbjct: 577 IDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG-------------QH------ 617
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
E++L+LF +M+R G R +R+ F+S++ ++LA + LG+QLH L++
Sbjct: 618 ------------EEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 665
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G+++ F G+ L+ MY KCG ++EA F+E+ +++ ISWN +I+ YA +G K+A+ +F
Sbjct: 666 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMF 725
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
E M G PD +T + +L+ACSH GL ++ +YF+ M Y + P +HY C++D LGR
Sbjct: 726 EGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGR 785
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
G + Q ++ MPF+ D W ++L +CR++G ELA AA+ +F MEP +A YV+L
Sbjct: 786 VGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 845
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
SN+YA +G+W D + V+ MRDRGV+K +GYSW+E++ K+++F+ D P D I L
Sbjct: 846 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDEL 905
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
+ L ++ + G+ LH V E K L+YHSE+LA+A+ +++ PAG PIR+MKNL
Sbjct: 906 DRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNL 965
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
C DCH IK ISKIV R II+RD+ RFHHF G CSCGDYW
Sbjct: 966 TACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 277/772 (35%), Positives = 420/772 (54%), Gaps = 63/772 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSV----SYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+ + +RNG C + ++ + ++ + + N +++ Y+ L A ++FD+MP R+
Sbjct: 51 LQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNT 110
Query: 124 VSWNVMISGYVRNKSLSAARNLF--------EMMP------------------------- 150
VS+ +I GY + S A LF E+ P
Sbjct: 111 VSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHAC 170
Query: 151 ------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
D ++ Y+ GYA+ AR++FD + K+ +SW G++A YV+N EE+
Sbjct: 171 VYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEES 230
Query: 205 CMLFES------KANWEVVSWNSLMGGFVKQKRLGDAKWI----FDRMPVRDEVSWNTMI 254
LF K N ++ S++ V + K + F + + +I
Sbjct: 231 LKLFSRMRIVGFKPN--NFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELI 288
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
Y ++ + +A ++FEE P DV W+ M++ Y Q+ + +EA +F M +
Sbjct: 289 DLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQF 348
Query: 315 MIAGYVQTKRMDMARELFEAMTCK--------NVASWNTMITGYAQSGEITHARNLFDRM 366
+A +Q + +L + C NV N ++ YA+ G + ++ LF
Sbjct: 349 TLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSES 408
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
P +SW +I GY Q+G E +L LF +M + ++SVL CA +A+LE G
Sbjct: 409 PNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGS 468
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H VK ++ VGNAL+ MY KCG++++A F+ + + D +SWN MI+GY+ HG
Sbjct: 469 QIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHG 528
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+AL FESM KPD +T VGILSACS+ GL+++G YF SM +Y + P ++HY
Sbjct: 529 LYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHY 588
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
TCMV LLGR+G LD+A L+ +PFEP W ALL AC ++ EL +A+ + E+EP
Sbjct: 589 TCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEP 648
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
E+ +VLLSN+YA + RWG+V+ +R M+ +G++K G SW+E Q +VH FSVGDT HP
Sbjct: 649 EDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHP 708
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ I LE L K + +G+V VL DV + +KE L HSE+LA+AYG++ P+
Sbjct: 709 DTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSI 768
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P+R++KNLR+C DCH AIK ISKIV R II+RD NRFHHF G CSCGDYW
Sbjct: 769 SPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 131/306 (42%), Gaps = 29/306 (9%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D ++ N + + + G +++L +F+ P + VS+N +I GY+ G + A
Sbjct: 375 KVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALI 434
Query: 114 VFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPK----RDVVSWNTMLSGYA 165
+F M + + V S +R +L + + K ++ V N ++ YA
Sbjct: 435 LFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYA 494
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNS 221
+ G AR +FD + E +++SWN +++ Y +G EA FES E V++
Sbjct: 495 KCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVG 554
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK 276
++ L + F M ++ + M+ ++ +L +A +L E P +
Sbjct: 555 ILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFE 614
Query: 277 -DVFTWTAMVSGYVQNGKVDEARM----IFDAMPEK-------NTVSWNAMIAGYVQTKR 324
V W A++S V + V+ R+ + + PE + + NA G V + R
Sbjct: 615 PSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIR 674
Query: 325 MDMARE 330
M R+
Sbjct: 675 TSMKRK 680
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/726 (37%), Positives = 392/726 (53%), Gaps = 55/726 (7%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSG 163
L+ AR VFDQ Q + N M+ GY+++ LF +M R D S L
Sbjct: 80 LEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKA 139
Query: 164 YAQNGYADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
A + + I ++ +EKN + +++ V+ G+I EA +F+ N +VV W
Sbjct: 140 CASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCW 199
Query: 220 NSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNNYLAEAQR--LFE 271
NS++GG+V+ A +F M P ++ G N L + +
Sbjct: 200 NSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLG 259
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
D+ T+ V Y + G ++ AR +F MP +N VSWNAMI+G V+ + + +L
Sbjct: 260 LGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDL 319
Query: 332 FEAMT-----------------CKNVASWNT---------------------MITGYAQS 353
F + C AS T ++ Y++
Sbjct: 320 FHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKC 379
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + A +F+RM + I+W A++ G AQ+G++ED+LRLF +M+ G N F S++
Sbjct: 380 GSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLV 439
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE-IVDKDV 472
+CA+L SL+ G+ +HG L ++GF AL+ MY KCG + A F + KDV
Sbjct: 440 HSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDV 499
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+ WN+MI GY HG G A+ ++ M G+KP+ T + +LSACSH+ LVE+G F S
Sbjct: 500 VLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNS 559
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M RD+ + P KHY C+VDLL RAGR +EAQ L++ MPF+P A ALL CR +
Sbjct: 560 MERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNIN 619
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
L + ++ + ++ N G+Y++LSN+YA + RW V +R MR+RG+KK GYS +E
Sbjct: 620 LGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETG 679
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
N VHTF GD HP + IY +LE L ++ G+V T VL DV EE K ML HSE
Sbjct: 680 NWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSE 739
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
+LA+A+G+L+ PAG IR+ KNLRVC DCH K+ISKIV R II+RD NRFHHFS G C
Sbjct: 740 RLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGEC 799
Query: 773 SCGDYW 778
SCGDYW
Sbjct: 800 SCGDYW 805
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 172/396 (43%), Gaps = 46/396 (11%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
D F T +V Y ++ AR +FD + + NAM+ GY+Q+ R ELF M
Sbjct: 63 DQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMR 122
Query: 336 -------TC-------------------------------KNVASWNTMITGYAQSGEIT 357
+C KN ++MI+ + G+I
Sbjct: 123 SRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIG 182
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A+ +FD MP D + W +II GY Q+G + + +LF EM G + + TS++ C
Sbjct: 183 EAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACG 242
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ +L+LGK +HG ++ +G V + + MY K G +E A F ++ ++++SWN
Sbjct: 243 GIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNA 302
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI+G R+G ++ LF + D T+V +L CS T + G R +
Sbjct: 303 MISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSF 362
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
N T +VDL + G L +A + M + + TW A+L G AE A
Sbjct: 363 E--SNLILSTAIVDLYSKCGSLKQATFVFNRMK-DRNVITWTAMLVGLAQNGH---AEDA 416
Query: 598 AEVIFEMEPEN-AGMYVLLSNLYAASGRWGDVSKVR 632
+ +M+ E A V +L + G + + R
Sbjct: 417 LRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGR 452
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 182/386 (47%), Gaps = 26/386 (6%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQR 121
I+ ++ G A VF+ MP + V +N++I GY+ G D A Q+F +M P
Sbjct: 172 ISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSP 231
Query: 122 DLVSWNVMISGYVRNKSLSAARN--LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
++ + G + N L + + + D++ + + Y++ G ++AR +F +
Sbjct: 232 ITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYK 291
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDA 235
M +N +SWN +++ V+NG + E+ LF S +++ + SL+ G + L
Sbjct: 292 MPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATG 351
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
K I +R + + ++ Y++ L +A +F ++V TWTAM+ G QN
Sbjct: 352 K-ILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQN 410
Query: 292 GKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR----ELFEAMTCKNVASW 343
G ++A +F M E+ N+V++ +++ + R LF ++ +
Sbjct: 411 GHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNM 470
Query: 344 NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
++ YA+ G+I A +F D + W ++I GY G+ ++ ++ +M G
Sbjct: 471 TALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGL 530
Query: 403 RLNRSPFTSVLSTCANLASLELGKQL 428
+ N++ F S+LS C++ +E G L
Sbjct: 531 KPNQTTFLSLLSACSHSRLVEQGISL 556
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 190/444 (42%), Gaps = 75/444 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMIS--------------- 100
D+ WN I +++ GC D A +F M + S ++ ++I
Sbjct: 195 DVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMH 254
Query: 101 GYLLN--------------------GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
GY+L G ++ AR VF +MP R+LVSWN MISG VRN +
Sbjct: 255 GYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVG 314
Query: 141 AARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFD---RMLEKNEISWNGLLA 193
+ +LF + + D+ + ++L G +Q + + R E N I ++
Sbjct: 315 ESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVD 374
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVS 249
Y + G +++A +F + V++W +++ G + DA +F +M + V+
Sbjct: 375 LYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVT 434
Query: 250 WNTMITGYAQNNYLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD-AM 304
+ +++ A L + LF D+ TA+V Y + GK++ A IF
Sbjct: 435 FVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGS 494
Query: 305 PEKNTVSWNAMIAGYVQ----TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
K+ V WN+MI GY + + + ++ E N ++ ++++ + S +
Sbjct: 495 ISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGI 554
Query: 361 NLFDRMPQHDCI-----SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV--- 412
+LF+ M + I +A ++ +++G E++ L E++ P T+V
Sbjct: 555 SLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALI-------EKMPFQPGTAVLEA 607
Query: 413 -LSTCANLASLELGKQLHGQLVKV 435
LS C ++ LG Q +L+ +
Sbjct: 608 LLSGCRTHKNINLGIQTSDKLLAL 631
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
K H Q++ FV L+ Y S+E A + F++ + N M+ GY +
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G ++ L LF M++ ++ D + L AC+ + E G E S + G+ N
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSA-VEKGMEKNRFV 167
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ M+ L + G++ EAQ + MP D W +++G Y + + A ++ FEM
Sbjct: 168 GSSMISFLVKFGKIGEAQRVFDGMP-NKDVVCWNSIIGG---YVQAGCFDVAFQLFFEM- 222
Query: 606 PENAGMY---VLLSNLYAASGRWGDV 628
+G+ + +++L A G G++
Sbjct: 223 -HGSGIKPSPITMTSLIQACGGIGNL 247
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 279/821 (33%), Positives = 427/821 (52%), Gaps = 140/821 (17%)
Query: 98 MISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF------ 146
+SG L+N G + AR +FD+MP+RD V WNVM+ YV N A F
Sbjct: 753 FVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRS 812
Query: 147 ------------------------------------EMMP---KRDVVSWNTMLSGYAQN 167
+M P ++ +WN L+ +
Sbjct: 813 GFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHA 872
Query: 168 GYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSW 219
G AA F +L + ++ +L+A V ++ ++ +S V
Sbjct: 873 GQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVS 932
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------- 272
NSLM + K + A+ F P D +SWNTMI+ YAQNN EA F +
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLK 992
Query: 273 -----------------------------------APVKDVFTWTAMVSGYVQNGKVDEA 297
+ D F TA++ Y + GK+DEA
Sbjct: 993 PDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------------------- 335
+ + + SWNA++ GY+++ + A E F M
Sbjct: 1053 EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCL 1112
Query: 336 ----TCKNVASW-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
K + ++ + ++ Y + G++ +A LF + + D ++W +I
Sbjct: 1113 INLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMI 1172
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+GY ++G + +L ++ M+ G + + F +++ + L +LE GKQ+H +VK+ +
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYS 1232
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
FVG +L+ MYCKCGSV++AY F ++ + V+ WN M+ G A+HG +AL LF +M
Sbjct: 1233 LDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTM 1292
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
++ GI+PD +T +G+LSACSH+GL + +YF +M + YG+ P +HY+C+VD LGRAGR
Sbjct: 1293 QSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGR 1352
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
+ EA+N++ +MPF+ A+ + ALLGACR G E A++ A+ + ++P ++ YVLLSN+
Sbjct: 1353 IQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNI 1412
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
YAAS +W DV+ R M+ + VKK G+SW++V+NKVH F V D HP+ IY +E+L
Sbjct: 1413 YAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDL 1472
Query: 679 EFKLKQDG-FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRV 737
+++++G +V T L DV EEEKE L YHSEKLA+A+G++S P IRV+KNLRV
Sbjct: 1473 MKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRV 1532
Query: 738 CEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
C DCH+AIK ISK+ R I+LRD NRFHHF G+CSCGDYW
Sbjct: 1533 CGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 211/474 (44%), Gaps = 83/474 (17%)
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR--- 174
+P R L N +I+ Y + SL +AR +F+ RD+V+WN++L+ YAQ +AD++
Sbjct: 643 LPDRYLT--NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ--FADSSYENV 698
Query: 175 ----RIFDRM---------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
R+F + L + LL+ +VQ + E + K +E+ + S
Sbjct: 699 LEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQ---VSETVHGYAVKIGFELDLFVS 755
Query: 222 --LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------- 270
L+ + K +G A+ +FD+MP RD V WN M+ Y +N++ EA R F
Sbjct: 756 GALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFF 815
Query: 271 -------------------------EEAPV-----------KDVFTWTAMVSGYVQNGKV 294
E+ ++F W ++ ++ G++
Sbjct: 816 PDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQI 875
Query: 295 DEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VASWNT 345
A F + ++V+ +++ V +D+ ++ A+ K+ V N+
Sbjct: 876 VAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI-HALVIKSSFAPVVPVSNS 934
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y+++G + A F P+ D ISW +I+ YAQ+ +++ F ++ R G + +
Sbjct: 935 LMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPD 994
Query: 406 RSPFTSVLSTCANLASLE---LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ SVL C+ E LG Q+H +K G FV AL+ +Y K G ++EA
Sbjct: 995 QFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEF 1054
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
D D+ SWN ++ GY + + AL F M +GI D+IT+ + A
Sbjct: 1055 LLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 152/337 (45%), Gaps = 30/337 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS------SVSYNAMISGYLLNGQLDPA 111
D+D+ WN + ++++ AL F+ M +++ SG L+N L
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLIN--LKQG 1118
Query: 112 RQVFDQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+Q+ + DL + ++ Y++ + A LF + + D V+W TM+SGY +N
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIEN 1178
Query: 168 GYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES--KANWEVVSW-- 219
G D A ++ M ++ +E ++ L+ A +E+ + + K ++ + +
Sbjct: 1179 GDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVG 1238
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK--- 276
SL+ + K + DA +F +M VR V WN M+ G AQ+ ++ EA LF
Sbjct: 1239 TSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQ 1298
Query: 277 -DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARE 330
D T+ ++S +G EA FDAM + ++ ++ ++ + R+ A
Sbjct: 1299 PDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAEN 1358
Query: 331 LFEAMTCKNVASWNTMITGYAQS-GEITHARNLFDRM 366
+ +M K AS + G ++ G+ A+ + D++
Sbjct: 1359 VIASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 17/235 (7%)
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+A L+LGK+ H ++V G ++ N L+ MY KCGS+ A F++ D+D+++WN++
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 479 IAGYARHGFGK-----DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
+A YA+ + LF ++ G +T+ +L C +G V+ +E +
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQV-SETVHGY 742
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
G + +V++ + G + +A+ L MP E DA W +L A Y +
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA---YVENSF 798
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAA-SGRWGDVSKVRLKMRDRGVKKVTGYS 647
++A + F +G + SNL+ G DVS R R ++V Y+
Sbjct: 799 QDEA--LRFFSAFHRSGFFPDFSNLHCVIGGVNSDVS----NNRKRHAEQVKAYA 847
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 279/821 (33%), Positives = 427/821 (52%), Gaps = 140/821 (17%)
Query: 98 MISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF------ 146
+SG L+N G + AR +FD+MP+RD V WNVM+ YV N A F
Sbjct: 753 FVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRS 812
Query: 147 ------------------------------------EMMP---KRDVVSWNTMLSGYAQN 167
+M P ++ +WN L+ +
Sbjct: 813 GFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHA 872
Query: 168 GYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSW 219
G AA F +L + ++ +L+A V ++ ++ +S V
Sbjct: 873 GQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVS 932
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------- 272
NSLM + K + A+ F P D +SWNTMI+ YAQNN EA F +
Sbjct: 933 NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLK 992
Query: 273 -----------------------------------APVKDVFTWTAMVSGYVQNGKVDEA 297
+ D F TA++ Y + GK+DEA
Sbjct: 993 PDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------------------- 335
+ + + SWNA++ GY+++ + A E F M
Sbjct: 1053 EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCL 1112
Query: 336 ----TCKNVASW-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
K + ++ + ++ Y + G++ +A LF + + D ++W +I
Sbjct: 1113 INLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMI 1172
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+GY ++G + +L ++ M+ G + + F +++ + L +LE GKQ+H +VK+ +
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYS 1232
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
FVG +L+ MYCKCGSV++AY F ++ + V+ WN M+ G A+HG +AL LF +M
Sbjct: 1233 LDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTM 1292
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
++ GI+PD +T +G+LSACSH+GL + +YF +M + YG+ P +HY+C+VD LGRAGR
Sbjct: 1293 QSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGR 1352
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
+ EA+N++ +MPF+ A+ + ALLGACR G E A++ A+ + ++P ++ YVLLSN+
Sbjct: 1353 IQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNI 1412
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
YAAS +W DV+ R M+ + VKK G+SW++V+NKVH F V D HP+ IY +E+L
Sbjct: 1413 YAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDL 1472
Query: 679 EFKLKQDG-FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRV 737
+++++G +V T L DV EEEKE L YHSEKLA+A+G++S P IRV+KNLRV
Sbjct: 1473 MKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRV 1532
Query: 738 CEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
C DCH+AIK ISK+ R I+LRD NRFHHF G+CSCGDYW
Sbjct: 1533 CGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 204/445 (45%), Gaps = 74/445 (16%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ---NNY--LAEAQRLF---- 270
N+L+ + K L A+ +FD+ RD V+WN+++ YAQ ++Y + E RLF
Sbjct: 650 NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLR 709
Query: 271 ------------------------------EEAPVK-----DVFTWTAMVSGYVQNGKVD 295
VK D+F A+V+ Y + G V
Sbjct: 710 EFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVG 769
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITG-- 349
+AR++FD MPE++ V WN M+ YV+ D A F A + ++ + +I G
Sbjct: 770 QARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVN 829
Query: 350 ---------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
+A+ + +A +F + +W + + +G ++ F + R
Sbjct: 830 SDVSNNRKRHAEQVK-AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRS 888
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
+ +LS L+LG+Q+H ++K F V N+L+ MY K G V A
Sbjct: 889 TIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F + D+ISWNTMI+ YA++ +A+ F + G+KPD T+ +L ACS T
Sbjct: 949 EKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS-T 1007
Query: 521 GLVEKGTEYFYSMNRDY------GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
G ++G EYF ++ + G+I +S T ++DL + G++DEA+ L+ ++ D
Sbjct: 1008 G--DEG-EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG-KYDFD 1063
Query: 575 AATWGALLGACRLYGKTELAEKAAE 599
A+W A++ Y K+ + KA E
Sbjct: 1064 LASWNAIMFG---YIKSNKSRKALE 1085
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 211/474 (44%), Gaps = 83/474 (17%)
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR--- 174
+P R L N +I+ Y + SL +AR +F+ RD+V+WN++L+ YAQ +AD++
Sbjct: 643 LPDRYLT--NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ--FADSSYENV 698
Query: 175 ----RIFDRM---------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
R+F + L + LL+ +VQ + E + K +E+ + S
Sbjct: 699 LEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQ---VSETVHGYAVKIGFELDLFVS 755
Query: 222 --LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------- 270
L+ + K +G A+ +FD+MP RD V WN M+ Y +N++ EA R F
Sbjct: 756 GALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFX 815
Query: 271 -------------------------EEAPV-----------KDVFTWTAMVSGYVQNGKV 294
E+ ++F W ++ ++ G++
Sbjct: 816 PDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQI 875
Query: 295 DEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VASWNT 345
A F + ++V+ +++ V +D+ ++ A+ K+ V N+
Sbjct: 876 VAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQI-HALVIKSSFAPVVPVSNS 934
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y+++G + A F P+ D ISW +I+ YAQ+ +++ F ++ R G + +
Sbjct: 935 LMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPD 994
Query: 406 RSPFTSVLSTCANLASLE---LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ SVL C+ E LG Q+H +K G FV AL+ +Y K G ++EA
Sbjct: 995 QFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEF 1054
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
D D+ SWN ++ GY + + AL F M +GI D+IT+ + A
Sbjct: 1055 LLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 152/337 (45%), Gaps = 30/337 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS------SVSYNAMISGYLLNGQLDPA 111
D+D+ WN + ++++ AL F+ M +++ SG L+N L
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLIN--LKQG 1118
Query: 112 RQVFDQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+Q+ + DL + ++ Y++ + A LF + + D V+W TM+SGY +N
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIEN 1178
Query: 168 GYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES--KANWEVVSW-- 219
G D A ++ M ++ +E ++ L+ A +E+ + + K ++ + +
Sbjct: 1179 GDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVG 1238
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK--- 276
SL+ + K + DA +F +M VR V WN M+ G AQ+ ++ EA LF
Sbjct: 1239 TSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQ 1298
Query: 277 -DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARE 330
D T+ ++S +G EA FDAM + ++ ++ ++ + R+ A
Sbjct: 1299 PDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAEN 1358
Query: 331 LFEAMTCKNVASWNTMITGYAQS-GEITHARNLFDRM 366
+ +M K AS + G ++ G+ A+ + D++
Sbjct: 1359 VIASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+A L+LGK+ H ++V G ++ N L+ MY KCGS+ A F++ D+D+++WN++
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 479 IAGYARHGFGK-----DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
+A YA+ + LF ++ G +T+ +L C +G V+ +E +
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQV-SETVHGY 742
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + +V++ + G + +A+ L MP E DA W +L A
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/830 (34%), Positives = 441/830 (53%), Gaps = 122/830 (14%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-SYNAMISGYLLNGQLDPARQVFDQMP 119
IR W M +G D A+ +F+ M R + + A+++ G L R++ Q+
Sbjct: 116 IRAW-------MEHGRPDKAMELFDRMEVRPNCHALIALVNACSCLGNLAAGRRIHSQIS 168
Query: 120 QRDL----VSWNVMISGYVRNKSLSAARNLFEMMP---KRDVVSWNTMLSGYAQNGYADA 172
RD V N +IS Y + SL A+ F+ +P KRDVV+WN M+S + +NG A
Sbjct: 169 DRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSARE 228
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-----------SKANWEVVSWNS 221
A ++F M N + V + +E + E + E +
Sbjct: 229 ALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTA 288
Query: 222 LMGGFVKQKRLGDAKWIF----DRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------- 270
L+ + K L DA +F D P V+ + MI+ QN + E+ RLF
Sbjct: 289 LVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEG 348
Query: 271 ----------------------------EEA-----PVKDVFTWTAMVSGYVQNGKVDEA 297
E+A +D T +++ Y ++ + A
Sbjct: 349 TKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRA 408
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITG---- 349
R FDA+ + VSWNAM A Y+Q R A LFE M + +VA++ T +T
Sbjct: 409 RATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAY 468
Query: 350 ----------------------------------YAQSGEITHARNLFDRM--PQHDCIS 373
YA+ G + AR +F+R+ + DCI+
Sbjct: 469 PPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCIT 528
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERL---NRSPFTSVLSTCANLASLELGKQLHG 430
W +++A Y G +++ LF M+ E+L N+ F +VL + S+ G+++H
Sbjct: 529 WNSMLAAYGHHGLGKEAFELFQAME--AEKLVKPNKVTFVAVLDASTSRTSIAQGREIHA 586
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD--KDVISWNTMIAGYARHGFG 488
++V GFE+ + NALL MY KCGS+++A F++ +DVI+W ++IAGYA++G
Sbjct: 587 RVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQA 646
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+ AL LF +M+ G++P+ +T + L+AC+H G +E+G E M D+G++P SKH++C
Sbjct: 647 ERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSC 706
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
+VDLLGR GRLDEA+ L++ + D TW ALL AC+ + E E+ AE I +++PE
Sbjct: 707 IVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEV 765
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
A Y++L+++YAA+GRW + + +R M D+G++ G S +EV ++H+FS GD HP+
Sbjct: 766 ASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKS 825
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
+ IY LE L + +K G+V T LVLHDV +E KE +L HSEKLA+A+G++S P+G P
Sbjct: 826 EEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSP 885
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+RV+KNLRVC DCH A K ISK+ GR I++RD++R+HHF+ G+CSCGDYW
Sbjct: 886 LRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 217/537 (40%), Gaps = 115/537 (21%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSM-----PRRSSVSY--------------- 95
A D+ WN I+ +RNG AL +F M P +SV++
Sbjct: 205 ASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSL 264
Query: 96 ----------------------NAMISGYLLNGQLDPARQVF----DQMPQRDLVSWNVM 129
A++ Y G LD A +VF D+ P LV+ + M
Sbjct: 265 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAM 324
Query: 130 ISGYVRNK----------------------SLSAARNLFEMM------------------ 149
IS +N +L + N M+
Sbjct: 325 ISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVS 384
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
RD V T+L+ YA++ AR FD + + +SWN + AAY+Q+ R EA +LFE
Sbjct: 385 ATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFE 444
Query: 210 ---------SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITG 256
S A + ++ + + Q K I + D N +
Sbjct: 445 RMLLEGVRPSVATF--ITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNM 502
Query: 257 YAQNNYLAEAQRLFEE-APV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNT 309
YA+ LA+A+ +FE +P +D TW +M++ Y +G EA +F AM + N
Sbjct: 503 YAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNK 562
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDR 365
V++ A++ + RE+ + S N ++ YA+ G + A+ +FD+
Sbjct: 563 VTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDK 622
Query: 366 MP--QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
Q D I+W ++IAGYAQ G +E +L+LF M++ G R N F S L+ C + LE
Sbjct: 623 SSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLE 682
Query: 424 LGKQ-LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
G + L G G + ++ + +CG ++EA E DVI+W ++
Sbjct: 683 QGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 739
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 192/369 (52%), Gaps = 28/369 (7%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVS 311
+I +A+ LAEA+ L + V++ TAM+ ++++G+ D+A +FD M + N +
Sbjct: 86 LIVMHAKCGNLAEAEALADR--FASVYSCTAMIRAWMEHGRPDKAMELFDRMEVRPNCHA 143
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMP 367
A++ + R + ++ + N N +I+ Y++ G + A+ FDR+P
Sbjct: 144 LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 203
Query: 368 ---QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG-ERLNRSPFTSVLSTC--ANLAS 421
+ D ++W A+I+ + ++G + ++L+LF +M R G N F SVL +C A L S
Sbjct: 204 RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLS 263
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF----EEIVDKDVISWNT 477
LE + +HG++V G E FV AL+ Y K GS+++A+ F +E +++ +
Sbjct: 264 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSA 323
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI+ ++G+ +++L LF +M G KP +T+V +L+ACS +++ G+ + + +
Sbjct: 324 MISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS---MLQVGSATAFVLEQAM 380
Query: 538 GVIPNSKHY---TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
V+ ++ T ++ R+ L A+ + PD +W A+ A + ++
Sbjct: 381 EVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQ-SPDVVSWNAMAAAYLQHHRS--- 436
Query: 595 EKAAEVIFE 603
+ A V+FE
Sbjct: 437 -REALVLFE 444
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 137/276 (49%), Gaps = 22/276 (7%)
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
++ ++R+D+ F A + +I +A+ G + A L DR S A+
Sbjct: 67 AHILSRRIDLHNHSFLA---------SDLIVMHAKCGNLAEAEALADRFAS--VYSCTAM 115
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I + + G + ++ LF M+ R N ++++ C+ L +L G+++H Q+ F
Sbjct: 116 IRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDF 172
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEI---VDKDVISWNTMIAGYARHGFGKDALML 494
E +GNAL+ MY KCGS+ +A AF+ + +DV++WN MI+ + R+G ++AL L
Sbjct: 173 EENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQL 232
Query: 495 FESMKTVGI-KPDDITMVGILSACSHTGLVE-KGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
F M G P+ +T V +L +C GL+ + + G+ + T +VD
Sbjct: 233 FRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDS 292
Query: 553 LGRAGRLDEA-QNLMKNMPFEPDAA--TWGALLGAC 585
G+ G LD+A + ++ EP + T A++ AC
Sbjct: 293 YGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISAC 328
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 295/783 (37%), Positives = 436/783 (55%), Gaps = 76/783 (9%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I ++R G SA +F+ M R+ V++ +ISGY NG+ D A F RD+V
Sbjct: 138 NTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF-----RDMV 192
Query: 125 SWNVMISGYVRNKSLSAAR-----------NLFEMMPK----RDVVSWNTMLSGYAQN-G 168
+ + Y +L A + + ++ K DVV N ++S Y
Sbjct: 193 RAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLD 252
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----------KANWEVVS 218
A+ AR +FD + +N ISWN +++ Y + G A LF S K N
Sbjct: 253 SANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSE 312
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
++ L G K + + A I + N ++ YA++ +A+A +FE KD
Sbjct: 313 FSVLEEGRRKGREV-HAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDS 371
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG--------------YVQTKR 324
+W +++SG QN ++A +F MPE + VSWN++I ++Q R
Sbjct: 372 VSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMR 431
Query: 325 --MDMARELF-------------------EAMTCK-----NVASWNTMITGYAQSGEITH 358
++R F A+ K + A N +++ Y + GE+
Sbjct: 432 GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNE 491
Query: 359 ARNLFDRMPQ-HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+F RM + D +SW ++I+GY + ++ L M + G+RL+ F ++LS CA
Sbjct: 492 CEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACA 551
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
++A+LE G ++H ++ E+ VG+AL+ MY KCG ++ A FE + ++V SWN+
Sbjct: 552 SVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNS 611
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI+GYARHG G+ AL LF M G PD +T VG+LSACSH G VE+G E+F SM+ Y
Sbjct: 612 MISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVY 671
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA-CRLYGK-TELAE 595
+ P +H++CMVDLLGRAG+LDE + + +MP +P+ W +LGA CR G+ TEL
Sbjct: 672 RLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGR 731
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
+AAE++ E+EP+NA YVLL+N+YA+ +W DV+K R M++ VKK G SW+ +++ V
Sbjct: 732 RAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGV 791
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F GD LHPEKD IY L EL K++ G++ TK L D+ E KE +L YHSEK+A
Sbjct: 792 HVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIA 851
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
VA+ +L+ + PIR+MKNLRVC DCH+A +ISKIVGR I+LRD+NRFHHF G CSCG
Sbjct: 852 VAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCG 910
Query: 776 DYW 778
DYW
Sbjct: 911 DYW 913
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 269/559 (48%), Gaps = 35/559 (6%)
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS----WNVMISGYVRNKSLS 140
N+ SS ++ ++I+ Y + + AR++ Q + V N +I+ YVR L
Sbjct: 92 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 151
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
+A+ LF+ M R++V+W ++SGY QNG D A F M+ N ++ L A
Sbjct: 152 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 211
Query: 197 QNGR------IEEACMLFESKANWEVVSWNSLMGGFVK-QKRLGDAKWIFDRMPVRDEVS 249
++G ++ ++ +++ +VV N L+ + DA+ +FD + +R+ +S
Sbjct: 212 ESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS 271
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVK---------DVFTWTAMVSGYVQNGKVDEARMI 300
WN++I+ Y++ A LF + D F+ +++ + G+ A +I
Sbjct: 272 WNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVI 331
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
+ + N ++ Y ++ + A +FE M K+ SWN++I+G Q+ A
Sbjct: 332 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 391
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYS-EDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+F MP++D +SW ++I + S S +++ F++M R G L+R F ++LS ++L
Sbjct: 392 EMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSL 451
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD-KDVISWNTM 478
+ E+ Q+H ++K +GNALL Y KCG + E F + + +D +SWN+M
Sbjct: 452 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 511
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR--- 535
I+GY + A+ L M G + D T ILSAC+ +E+G E R
Sbjct: 512 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACL 571
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+ V+ S +VD+ + GR+D A + MP + +W +++ +G E A
Sbjct: 572 ESDVVVGSA----LVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKAL 626
Query: 596 KA-AEVIFEMEPENAGMYV 613
K ++ + +P + +V
Sbjct: 627 KLFTRMMLDGQPPDHVTFV 645
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 194/438 (44%), Gaps = 77/438 (17%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRS-SVSY--------------------------- 95
WN I+ + R G SA +F+SM + S+
Sbjct: 272 WNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVI 331
Query: 96 ------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
N +++ Y +G + A VF+ M ++D VSWN +ISG +N+ A
Sbjct: 332 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 391
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQN-GYADAARRIFDRMLEK----NEISWNGLLAAYVQN 198
+F +MP+ D VSWN+++ + + A + F +M+ + +++ +L+A V +
Sbjct: 392 EMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSA-VSS 450
Query: 199 GRIEEA-----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNT 252
+ E ++ + + + N+L+ + K + + + IF RM RDEVSWN+
Sbjct: 451 LSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNS 510
Query: 253 MITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMI----FDAM 304
MI+GY N L +A L ++ D FT+ ++S ++ + A
Sbjct: 511 MISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC 570
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
E + V +A++ Y + R+D A FE M +NV SWN+MI+GYA+ G A LF
Sbjct: 571 LESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT 630
Query: 365 RM------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
RM P H +++ +++ + G+ E+ F K E SP S +
Sbjct: 631 RMMLDGQPPDH--VTFVGVLSACSHVGFVEEGFEHF---KSMSEVYRLSPRVEHFSCMVD 685
Query: 419 LASLELGKQLHGQLVKVG 436
L LG+ G+L +VG
Sbjct: 686 L----LGRA--GKLDEVG 697
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 151/351 (43%), Gaps = 67/351 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV--FDQ 117
D WN I+ +N C + A +F+ MP VS+N++I G L + + ++ V F Q
Sbjct: 370 DSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVI-GALSDSEASVSQAVKYFLQ 428
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK-----------RDVVSWNTMLSGYAQ 166
M + W + ++ S ++ +L E+ + D N +LS Y +
Sbjct: 429 MMRG---GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGK 485
Query: 167 NGYADAARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLF----------------- 208
G + +IF RM E ++E+SWN +++ Y+ N + +A L
Sbjct: 486 CGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFAT 545
Query: 209 -----ESKANWE-----------------VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
S A E VV ++L+ + K R+ A F+ MP+R+
Sbjct: 546 ILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRN 605
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
SWN+MI+GYA++ + +A +LF + D T+ ++S G V+E F
Sbjct: 606 VYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFK 665
Query: 303 AMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
+M E +S ++ M+ + ++D + +M K NV W T++
Sbjct: 666 SMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 716
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/547 (42%), Positives = 345/547 (63%), Gaps = 2/547 (0%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGR 200
AR LF+ P RDVVSW M++ YA+ G A + R +N ++W LL+ Y + R
Sbjct: 58 ARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSGYARARR 117
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++EA LF+ VVSWN+++ + R+G A +FD MPVRD SWN ++ ++
Sbjct: 118 VDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRS 177
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
+ EA+RLFE P ++V +WT M+SG ++G DEAR +FD MPE+N VSWNAMI+GY
Sbjct: 178 GTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYA 237
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ R+D A +LF M ++VASWN MITG+ Q+ ++ A+ LFD MP+ + +SW ++ G
Sbjct: 238 RNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNG 297
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Q SE +L++F M G R N+ F + +NLA L G+Q+H + K F+
Sbjct: 298 CLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFD 357
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
F+ ++L+ +Y KCG + A F+ +KDVISWN MIA YA HG G +A+ L+E M+
Sbjct: 358 NFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQE 417
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
KP+D+T VG+LSACSH+GLV++G F M +D + +HY+C++DL RAGRLD
Sbjct: 418 NRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLD 477
Query: 561 EAQNLMKNMPFEPDAAT-WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
+A+ L+ + +P ++T W ALLG C +G + + AA + E EP+NAG Y LLSN+Y
Sbjct: 478 DAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIY 537
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A++G+W + +K+R +M DRG+KK G SW+E+ NKVH F D H E + IY+ L+++
Sbjct: 538 ASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELANKVHVFVARDKSHSESELIYSLLQDIH 597
Query: 680 FKLKQDG 686
++ DG
Sbjct: 598 HMMRMDG 604
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 244/484 (50%), Gaps = 45/484 (9%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISGY 133
G A +F+ P R VS+ AM++ Y GQL A + + +R++V+W ++SGY
Sbjct: 53 GRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSGY 112
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
R + + AR LF+ MP+R+VVSWNTML YA G AA +FD M ++ SWN LLA
Sbjct: 113 ARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLA 172
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
A V++G ++EA LFE V+SW +++ G + +A+ +FD MP R+ VSWN M
Sbjct: 173 ALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAM 232
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
I+GYA+N + EA LF P +DV +W M++G++QN + +A+ +FD MP++N VSW
Sbjct: 233 ISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWT 292
Query: 314 AMIAGYVQTKRMDMARELFEA----------------------------------MTCKN 339
M+ G +Q +MA ++F M CK
Sbjct: 293 TMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKT 352
Query: 340 VASWNTMITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
++ I YA+ GEI AR +FD + D ISW +IA YA G +++ L+
Sbjct: 353 PFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALY 412
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC-K 453
+M+ + N + +LS C++ ++ G ++ + K A + L+ C +
Sbjct: 413 EKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSR 472
Query: 454 CGSVEEAYHAFEEIVDKDVIS--WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
G +++A + K S W+ ++ G H G +++ + + +PD+
Sbjct: 473 AGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAH--GNESIGDLAARNLLEAEPDNAGTY 530
Query: 512 GILS 515
+LS
Sbjct: 531 TLLS 534
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 205/393 (52%), Gaps = 48/393 (12%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
+P ++ W ++ + R D A +F+ MP R+ VS+N M+ Y G++ A
Sbjct: 95 RPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACA 154
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+FD MP RD SWN++++ VR+ ++ AR LFE MP+R+V+SW TM+SG A++G AD A
Sbjct: 155 LFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEA 214
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
R +FD M E+N +SWN +++ Y +N RI+EA LF + +V SWN ++ GF++ K L
Sbjct: 215 RALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLK 274
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNY------------------------------- 262
A+ +FD MP R+ VSW TM+ G Q N
Sbjct: 275 KAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGS 334
Query: 263 ----LAEAQRLFE---EAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
L+E Q++ + + P + D F ++++ Y + G++ AR +FD EK+ +SWN
Sbjct: 335 NLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNG 394
Query: 315 MIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
MIA Y A L+E M N ++ +++ + SG + +F+ M +
Sbjct: 395 MIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDK 454
Query: 371 CIS-----WAAIIAGYAQSGYSEDSLRLFIEMK 398
I+ ++ +I +++G +D+ RL +K
Sbjct: 455 SIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLK 487
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 20/290 (6%)
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A +F +V N I A +G + AR LFDR P D +SW A++A YA+ G
Sbjct: 27 AAAVFSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQL 86
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
++ L + R R N +T++LS A ++ + L ++ E N +
Sbjct: 87 HEASAL---LHRPDARRNVVTWTALLSGYARARRVDEARALFDRMP----ERNVVSWNTM 139
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
L Y G + A F+ + +D SWN ++A R G +A LFE M +
Sbjct: 140 LEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPERNV---- 195
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
++ ++S + +G ++ F M N + M+ R R+DEA +L
Sbjct: 196 MSWTTMISGLARSGSADEARALFDGMPE-----RNVVSWNAMISGYARNLRIDEALDLFM 250
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
NMP E D A+W ++ + + + +KA E+ EM N + + N
Sbjct: 251 NMP-ERDVASWNIMITG---FIQNKDLKKAQELFDEMPKRNVVSWTTMMN 296
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 302/868 (34%), Positives = 450/868 (51%), Gaps = 114/868 (13%)
Query: 2 RGNNRLRQLHSSCILHQHTQSINRLQS----PANTNPYPSKKTL--------------KR 43
R N +RQ+H I + L S P ++ Y S K+L
Sbjct: 42 RSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASYLACGATSD 101
Query: 44 HLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR-------------- 89
L+ R P PA W WN+ + H+ G D A+ V M R
Sbjct: 102 ALSVLERVVPSPA-VW----WNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYAL 156
Query: 90 ---------RSSVSY----------------NAMISGYLLNGQLDPARQVFDQMPQR--- 121
RS ++ NA+++ Y +G L+ A VFD++ ++
Sbjct: 157 KACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGID 216
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D++SWN +++ +V+ + A +LF M T++ A N +D +
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALDLFSEM--------TTIVHEKATNERSDIISIV----- 263
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
N + L A Q I + + A+ V N+L+ + K + DA +F+
Sbjct: 264 --NILPACASLKALPQTKEIHSYAIRNGTFADAFVC--NALIDTYAKCGSMKDAVNVFNV 319
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDE 296
M +D VSWN M+TGY Q+ A LF E P+ DV TW+A+++GY Q G E
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPL-DVITWSAVIAGYAQRGYGQE 378
Query: 297 ARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW--------- 343
A F M E N+V+ ++++ + E K + S
Sbjct: 379 ALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGD 438
Query: 344 -------NTMITGYAQSGEITHARNLFDRMP--QHDCISWAAIIAGYAQSGYSEDSLRLF 394
N +I Y++ AR +F+ +P + + ++W +I GYAQ G S D+L+LF
Sbjct: 439 GEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLF 498
Query: 395 IEM--KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGC-FVGNALLVM 450
EM K Y N + +L CA+L+SL +GKQ+H + + +E+ FV N L+ M
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDM 558
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG V+ A + F+ + ++ +SW +M++GY HG GK+AL +F+ M+ G PDDI+
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+ +L ACSH+G+V++G +YF M DYGVI +++HY C++DLL R+GRLD+A ++ MP
Sbjct: 619 LVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMP 678
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
EP AA W ALL ACR++ ELAE A + M+ EN G Y L+SN+YA + RW DV++
Sbjct: 679 MEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVAR 738
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
+R M+ G+KK G SW++ + +F VGD HP IY+ LE L ++K G+V
Sbjct: 739 IRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPE 798
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
T LHDV +EEK ++L HSEKLA+AYG+L+ G PIR+ KNLRVC DCH+A +ISK
Sbjct: 799 TNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISK 858
Query: 751 IVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IV II+RD++RFHHF GSCSCG YW
Sbjct: 859 IVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 281/752 (37%), Positives = 414/752 (55%), Gaps = 70/752 (9%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQR--DLVSWNVMISGYVRNKSLSAARNLFEMM- 149
V + ++ Y+ +L AR VFD+MP R ++V WN++I Y N A +L+ M
Sbjct: 52 VPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKML 111
Query: 150 -----PKRDVVSWNTMLSGYAQNGYADAARRI---FDRM-LEKNEISWNGLLAAYVQNGR 200
P R ++ +L + A R I R+ LE N L+ Y + G
Sbjct: 112 GYGITPNR--FTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGC 169
Query: 201 IEEACMLFESKANWEVVSWNSLMGGF-VKQKRLGDAKWIFDRMPVRDEVSWNT-----MI 254
+++A +F+ +VV+WNS++ GF + + + + +M +++VS N+ ++
Sbjct: 170 LDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM--QNDVSPNSSTIVGVL 227
Query: 255 TGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNT 309
AQ N L + + V DV T ++ Y + +D AR IFD M KN
Sbjct: 228 PAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNE 287
Query: 310 VSWNAMIAGYVQTKRMDMARELF-------------EAMT-------CKNVASW------ 343
V+W+AM+ YV M A ELF A+T C N+
Sbjct: 288 VTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCL 347
Query: 344 ----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
NT+++ YA+ G I A F+ M D +S+ AII+GY Q+G S
Sbjct: 348 HCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNS 407
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
E+ LR+F+EM+ G ++ SVL CA+LA L G H + GF A + NAL
Sbjct: 408 EEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNAL 467
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KCG ++ A F+ + + ++SWNTMI Y HG G +AL+LF++M++ G+KPDD
Sbjct: 468 IDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDD 527
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T + ++SACSH+GLV +G +F +M +D+G+IP +HY CMVDLL RAG E + ++
Sbjct: 528 VTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIE 587
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP EPD WGALL ACR+Y EL E ++ I ++ PE+ G +VLLSN+Y+A GRW D
Sbjct: 588 KMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDD 647
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD-TLHPEKDRIYAYLEELEFKLKQDG 686
++VR +++G +K G SW+E+ VHTF G HP+ +I L+EL ++K+ G
Sbjct: 648 AAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLG 707
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ + V DV EEEKE +L YHSEKLA+A+GILS+ + I V KNLRVC DCH AIK
Sbjct: 708 YQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIK 767
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS + R I +RD +RFHHF G C+CGD+W
Sbjct: 768 FISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 199/433 (45%), Gaps = 44/433 (10%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAG---DWDIRQW----NVAITTHM-----RNGCCDSALHV 83
P++ T L + S K G DI++ NV ++T + + GC D A V
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 84 FNSMPRRSSVSYNAMISGYLLN-GQLDPARQVFDQMPQRDLVSWNVMISGYV----RNKS 138
F+ M +R V++N+MISG+ L+ G D ++ QM Q D+ + I G + + S
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNS 235
Query: 139 LSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLA 193
L + + +R DVV +L Y + D ARRIFD M + KNE++W+ ++
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVG 295
Query: 194 AYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAK-------WIFDRM 242
AYV + EA C L K + V+S +L L D +
Sbjct: 296 AYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSG 355
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
V D + NT+++ YA+ + A R F E ++D ++TA++SGYVQNG +E +F
Sbjct: 356 FVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFL 415
Query: 303 AM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS---WNTMITGYAQS 353
M PEK T++ ++ + A+ C A N +I YA+
Sbjct: 416 EMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCY-AIICGFTADTMICNALIDMYAKC 474
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G+I AR +FDRM + +SW +I Y G ++L LF M+ G + + F ++
Sbjct: 475 GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLI 534
Query: 414 STCANLASLELGK 426
S C++ + GK
Sbjct: 535 SACSHSGLVAEGK 547
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 155/375 (41%), Gaps = 47/375 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N ++ + + G + A+ FN M R +VS+ A+ISGY+ NG + ++F +M
Sbjct: 359 DLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQ 418
Query: 119 -----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--KRDVVSWNTMLSGYAQNGYAD 171
P++ ++ + ++ + + + ++ D + N ++ YA+ G D
Sbjct: 419 LSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKID 478
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFV 227
AR++FDRM ++ +SWN ++ AY +G EA +LF++ + + V++ L+
Sbjct: 479 TARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACS 538
Query: 228 KQKRLGDAKWIFDRMP-----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTW 281
+ + K+ F+ M + + M+ ++ E E+ P++ DV W
Sbjct: 539 HSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVW 598
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
A++S A ++ + VS G T + ++ A V
Sbjct: 599 GALLS----------ACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSA-----VG 643
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY---------SEDSLR 392
W+ A T F++ P I + ++ + GY S
Sbjct: 644 RWDD-----AAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDE 698
Query: 393 LFIEMKRYGERLNRS 407
L +EMKR G + S
Sbjct: 699 LLVEMKRLGYQAESS 713
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/747 (35%), Positives = 408/747 (54%), Gaps = 93/747 (12%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
DL S + + +++ R LF + K D+ +N ++ G++ NG ++ ++ +
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 182 EKNEISWNGLLAAYVQNG--RIEE--ACMLFESKANWEVVSWNSLMGG-----FVKQKRL 232
+K + + A+ + R+E+ +L + + + V+ N +G + K R
Sbjct: 105 KKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-------------APV---- 275
A+ +FD MP RD V WNTMI+G+++N+Y ++ R+F + A V
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224
Query: 276 ----------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
DV+ T ++S Y + GK + R++FD + + + +S+N
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYN 284
Query: 314 AMIAGYVQTKRMDMARELF-EAMTCKNVASWNTMI------------------------- 347
AMI+GY + A LF E + + +T++
Sbjct: 285 AMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKI 344
Query: 348 -------------TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
T Y + E+ AR LFD P+ SW A+I+GY Q+G ++ ++ LF
Sbjct: 345 GIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404
Query: 395 IEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
EM +L+ +P T S+LS CA L +L +GK +HG + E+ +V AL+ MY
Sbjct: 405 QEMM---PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYA 461
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCGS+ EA F+ +VDK+V++WN MI GY HG GK+AL LF M GI P +T +
Sbjct: 462 KCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLS 521
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
IL ACSH+GLV +G E F+SM +YG P S+HY CMVD+LGRAG+L A ++ MP E
Sbjct: 522 ILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLE 581
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
P A WGALLGAC ++ TE+A A++ +F+++PEN G YVLLSN+Y+ + + VR
Sbjct: 582 PGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVR 641
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST- 691
++ R + K G + +E+ ++ + F+ GD HP+ I+ LE+L K+++ G+ T
Sbjct: 642 QVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETV 701
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
LHDV +EEKE M+ HSEKLA+A+G++S G IR++KNLRVC DCH A K ISKI
Sbjct: 702 TTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKI 761
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+I++RD NRFHHF G CSCGDYW
Sbjct: 762 TERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 26/384 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVR 135
A VF+ MP R +V +N MISG+ N + + +VF M D + +++
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226
Query: 136 NKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
+ + + K+ DV ++S Y++ G + R +FD++ + + IS+N +
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 192 LAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMG--------GFVKQKRLGDAKWIFDRM 242
++ Y N E A LF E A+ + V+ ++L+G ++ RL + +
Sbjct: 287 ISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGI 346
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF- 301
++ VS + T Y + N + A++LF+E+P K + +W AM+SGY QNG D A +F
Sbjct: 347 ILQPSVS-TALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 302 DAMPE--KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGE 355
+ MP+ N V+ ++++ Q + + + + + + NV ++ YA+ G
Sbjct: 406 EMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGS 465
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I AR LFD M + ++W A+I GY G+ +++L+LF EM + G F S+L
Sbjct: 466 IVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYA 525
Query: 416 CANLASLELGKQL-HGQLVKVGFE 438
C++ + G ++ H GF+
Sbjct: 526 CSHSGLVSEGNEIFHSMANNYGFQ 549
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 69 TTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ-MPQ------- 120
T + R A +F+ P +S S+NAMISGY NG D A +F + MPQ
Sbjct: 358 TVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVT 417
Query: 121 -------------------------RDLVSWNVMISG-----YVRNKSLSAARNLFEMMP 150
+ + NV +S Y + S+ AR LF++M
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACM 206
++VV+WN M++GY +G+ A ++F ML+ +++ +L A +G + E
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537
Query: 207 LFESKAN---WEVVS--WNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITG--YA 258
+F S AN ++ +S + ++ + +L +A +RMP+ W ++
Sbjct: 538 IFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597
Query: 259 QNNYLAE--AQRLFEEAP 274
+N +A ++RLF+ P
Sbjct: 598 KNTEMANVASKRLFQLDP 615
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 9/197 (4%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F ++L+ L+ L Q+ QL+ G L + G+V F ++
Sbjct: 17 FLTLLNNATTLSQL---LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVS 73
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGT 527
D+ +N +I G++ +G K ++ L+ + K ++PD+ T +SA S E+
Sbjct: 74 KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLE-DERVG 132
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
++ + GV N + +VDL + R + A+ + MP E D W ++
Sbjct: 133 VLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISG--- 188
Query: 588 YGKTELAEKAAEVIFEM 604
+ + E + V +M
Sbjct: 189 FSRNSYFEDSIRVFVDM 205
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 283/827 (34%), Positives = 447/827 (54%), Gaps = 109/827 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR--------SSVSYNAMISGY--LLNGQLD 109
++ N I+ + + G SA +F++M + + ++ ++IS L N L
Sbjct: 242 NLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLV 301
Query: 110 PARQVFDQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
Q+ ++ + DL + ++SG+ + S+ A+N+F+ M R+VVS N ++ G
Sbjct: 302 LLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLV 361
Query: 166 QNGYADAARRIFDRM---LEKNEISWNGLLAAY-----VQNGRIE----EACMLFESKAN 213
+ + A +F M +E N S+ +L A+ ++NG+ + A ++ N
Sbjct: 362 RQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLN 421
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
++ N L+ + K + DA +F M +D V+WN+MITG QN EA + F+E
Sbjct: 422 AQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEM 481
Query: 274 ------PVK---------------------------------DVFTWTAMVSGYVQNGKV 294
P DV A+++ Y + G V
Sbjct: 482 RRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYV 541
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRM----------------------------- 325
E + F M + + VSWN++I ++
Sbjct: 542 KECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAA 601
Query: 326 -------DMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMP-QHDCIS 373
++ +++ + +NVA+ N ++ Y + G++ + N+F RM + D +S
Sbjct: 602 VSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVS 661
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W ++I+GY + ++ + M + G+RL+ F +VLS CA +A+LE G ++HG V
Sbjct: 662 WNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSV 721
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+ E+ +G+AL+ MY KCG ++ A FE + +++ SWN+MI+GYARHG G +L
Sbjct: 722 RACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLD 781
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LF MK G PD +T VG+LSACSH GLV +G +F SM+ YG+ P +H++CMVDLL
Sbjct: 782 LFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLL 841
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGA-CRLYGK-TELAEKAAEVIFEMEPENAGM 611
GR G L++ ++ + MP +P+ W +LGA CR G+ T L +AAE++ EMEP NA
Sbjct: 842 GRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVN 901
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
Y+LLSN+YA+ G+W DV+K R+ MR VKK G SW+ +++ VH F GD HPEKD I
Sbjct: 902 YILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLI 961
Query: 672 YAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
Y L+EL K++ G++ T+ L+D+ E KE +L YHSEK+AVA+ +L+ P+ PIR+
Sbjct: 962 YEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRI 1020
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLRVC DCH+A K+IS+IV R I+LRD+NRFHHF G CSCGD+W
Sbjct: 1021 LKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 163/649 (25%), Positives = 257/649 (39%), Gaps = 178/649 (27%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE------MM 149
N +I+ Y G L R+VFD+MP R+LVSW+ +ISGY RN+ + A LF M
Sbjct: 112 NTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFM 171
Query: 150 PKR-----------------------------------DVVSWNTMLSGYAQN-GYADAA 173
P DV + N ++S Y G D A
Sbjct: 172 PNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYA 231
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE------------------------ 209
RR FD + +N +S N +++ Y Q G A +F
Sbjct: 232 RRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISA 291
Query: 210 --SKANWEVVSW-------------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
S AN +V ++L+ GF K +G AK IF +M R+ V
Sbjct: 292 TCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVV 351
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEA-------PVKDVFTWTA------------------ 283
S N +I G + EA LF E P + TA
Sbjct: 352 SLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVH 411
Query: 284 ------------------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
+++ Y + G +++A ++F M K++V+WN+MI G Q K+
Sbjct: 412 AFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQF 471
Query: 326 DMARELFEAM-----------------TCK----------------------NVASWNTM 346
A + F+ M +C +V+ N +
Sbjct: 472 LEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNAL 531
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE-DSLRLFIEMKRYGERLN 405
+ Y + G + + F M +D +SW ++I A S S +++ F+ M R G N
Sbjct: 532 LALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPN 591
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
R F ++L+ ++L+ ELGKQ+H ++K A + NALL Y KCG + + F
Sbjct: 592 RVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFS 651
Query: 466 EIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ D+ D +SWN+MI+GY + A+ + M G + D T +LSAC+ +E
Sbjct: 652 RMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLE 711
Query: 525 KGTEYFYSMNR---DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+G E R + ++ S +VD+ + GR+D A + MP
Sbjct: 712 RGMEVHGCSVRACLESDIVIGSA----LVDMYAKCGRIDYASRFFEMMP 756
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 149/600 (24%), Positives = 256/600 (42%), Gaps = 120/600 (20%)
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
Q+F DL N +I+ Y R L + R +F+ MP R++VSW+ ++SGY +N +
Sbjct: 98 QLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNE 157
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC----------------MLFESKANWEV 216
A +F +M+ +G + + G + AC ++ +++ +V
Sbjct: 158 ACELFRKMVS------DGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211
Query: 217 VSWNSLMGGFVKQKRLGD-AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----- 270
+ N L+ + + D A+ FD + R+ VS N+MI+ Y Q A +F
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQK 271
Query: 271 ----------------------------------------EEAPVKDVFTWTAMVSGYVQ 290
+ + D++ +A+VSG+ +
Sbjct: 272 EVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAK 331
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------------- 336
G + A+ IF M +N VS N +I G V+ KR + A ELF M
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIIL 391
Query: 337 -----------------------------CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+A N +I YA+ G I A +F M
Sbjct: 392 TAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMD 451
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLELG 425
D ++W ++I G Q+ ++++ F EM+R L S FT S LS+CA+L + +G
Sbjct: 452 NKDSVTWNSMITGLDQNKQFLEAVKTFQEMRR--TELYPSNFTMISALSSCASLGWISVG 509
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+QLH + +K+G + V NALL +Y +CG V+E AF ++D D +SWN++I A
Sbjct: 510 EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADS 569
Query: 486 GFGK-DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
+A+ F M G P+ +T + IL+A S L E G + +++ V ++
Sbjct: 570 EPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQ-IHALVLKRNVAADTA 628
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
++ G+ G + +N+ M D +W +++ Y EL KA ++++ M
Sbjct: 629 IENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISG---YIHNELLPKAMDMVWFM 685
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 143/290 (49%), Gaps = 16/290 (5%)
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ +LF+ ++ NT+I YA+ G++ R +FD MP + +SW+ +I+GY ++
Sbjct: 94 ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA--SLELGKQLHGQLVKVGFEAGCFV 443
++ LF +M G N F SV+ C L+ G Q+HG + K +
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213
Query: 444 GNALLVMYCKC-GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV- 501
N L+ MY G V+ A AF+ I ++++S N+MI+ Y + G A +F +M+
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273
Query: 502 ---GIKPDDITMVGILSA-CS--HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
G+KP++ T ++SA CS ++GLV E + G + + + +V +
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVL--LEQLLTRVEKSGFLHDLYVGSALVSGFAK 331
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
AG + A+N+ + M + + G ++G R + E+A E+ EM+
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVR----QKRGEEAVELFMEMK 377
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
++LH QL K GF F+ N L+ +Y + G + F+E+ ++++SW+ +I+GY R
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
+ +A LF M + G P+ ++ AC G
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG 188
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/753 (35%), Positives = 408/753 (54%), Gaps = 56/753 (7%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H + S + + YL Q+ AR++FD++P ++ WN +I Y N
Sbjct: 33 HFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDG 92
Query: 142 ARNLFEMM------PKR---------------------------------DVVSWNTMLS 162
A +L+ M P + DV ++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
YA+ G A+R+F M ++ ++WN ++A G ++A L + +S
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 223 MGGFV----KQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ G + + K LG K + R V ++ YA+ L A+++F+
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ---TKRMDMARE- 330
V++ +W+AM+ GYV + + EA +FD M K+ + + G V K D++R
Sbjct: 273 VRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
Query: 331 -----LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ + + ++ NT+++ YA+ G I A FD M D +S++AI++G Q+G
Sbjct: 333 KLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNG 392
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ +L +F M+ G + + VL C++LA+L+ G HG L+ GF + N
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG + A F + D++SWN MI GY HG G +AL LF + +G+KP
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKP 512
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
DDIT + +LS+CSH+GLV +G +F +M+RD+ ++P +H CMVD+LGRAG +DEA +
Sbjct: 513 DDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF 572
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
++NMPFEPD W ALL ACR++ EL E+ ++ I + PE+ G +VLLSN+Y+A+GRW
Sbjct: 573 IRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRW 632
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
D + +R+ +D G+KK+ G SW+E+ VH F GD H + +I LEEL ++K+
Sbjct: 633 DDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRL 692
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+ V DV EEEKE +L YHSEKLA+A+GIL++ AGRPI V KNLRVC DCH AI
Sbjct: 693 GYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAI 752
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ++ I R I +RD NRFHHF G+C+CGD+W
Sbjct: 753 KFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 183/390 (46%), Gaps = 37/390 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + G A +F+SM R V++NAMI+G L G D A Q+ QM
Sbjct: 143 DVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQ 202
Query: 120 QRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRD----VVSWNTMLSGYAQNGYAD 171
+ + + I G + K+L + L +R VV +L YA+
Sbjct: 203 EEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLL 262
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-----SKANWEVVSWNSLMGGF 226
AR+IFD M +NE+SW+ ++ YV + ++EA LF+ + V+ S++
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Query: 227 VKQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
K L + +I V D + NT+++ YA+ + +A R F+E KD +++
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFS 382
Query: 283 AMVSGYVQNGKVDEARMIFDAM------PEKNTV--------SWNAMIAGYVQTKRMDMA 328
A+VSG VQNG A IF M P+ T+ A+ G+ + +
Sbjct: 383 AIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR 442
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+ + C N +I Y++ G+I+ AR +F+RM +HD +SW A+I GY G
Sbjct: 443 GFATDTLIC------NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
++L LF ++ G + + F +LS+C++
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSH 526
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 21/341 (6%)
Query: 304 MPEKNTVSWN--AMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG-----YAQSGEI 356
MP + V N ++ +Q+K + A+++ + KN ++ ++ + Y ++
Sbjct: 1 MPLRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFL-KNTSNADSSVLHKLTRLYLSCNQV 59
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD +P I W II YA +G + ++ L+ M G R N+ + VL C
Sbjct: 60 VLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKAC 119
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
+ L ++E G ++H G E+ FV AL+ Y KCG + EA F + +DV++WN
Sbjct: 120 SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN 179
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNR 535
MIAG + +G DA+ L M+ GI P+ T+VG+L + G + Y + R
Sbjct: 180 AMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRR 239
Query: 536 --DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
D GV+ T ++D+ + L A+ + M + +W A++G Y ++
Sbjct: 240 SFDNGVVVG----TGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGG---YVASDC 291
Query: 594 AEKAAEVIFEMEPENA--GMYVLLSNLYAASGRWGDVSKVR 632
++A E+ +M ++A V L ++ A + D+S+ R
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 275/755 (36%), Positives = 406/755 (53%), Gaps = 99/755 (13%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMM--PKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
D + N +I+ Y ++ A ++F+ M KRDVVS+++++S +A N A +FD+
Sbjct: 86 DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQ 145
Query: 180 MLEK-----NEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQ 229
+L + NE + ++ A ++ G + LF + V L+ FVK
Sbjct: 146 LLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKG 205
Query: 230 KRLGD---AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-----APVKDVFTW 281
L D A+ +FD+M ++ V+W MIT AQ Y EA LF E V D FT
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265
Query: 282 TAMVS-----------------------------------GYVQNGKVDEARMIFDAMPE 306
T ++S Y + G V EAR +FD M E
Sbjct: 266 TGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE 325
Query: 307 KNTVSWNAMIAGYV--------QTKRMDMARELFEAMTCKNVASW--------------- 343
N +SW A++ GYV + RM + L + N ++
Sbjct: 326 HNVMSWTALVNGYVRGGGGYEREAMRM-FSNMLLQGGVAPNCFTFSGVLKACASLPDFDF 384
Query: 344 --------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
N +++ YA+SG + AR FD + + + +S + +
Sbjct: 385 GEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVK 444
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
L E++ G ++ + S+LS A + ++ G+Q+H +VK+GF V
Sbjct: 445 DFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSV 504
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
NAL+ MY KCG+ E A F ++ D +VI+W ++I G+A+HGF AL LF +M G+
Sbjct: 505 NNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGV 564
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
KP+D+T + +LSACSH GL+++ ++F SM ++G++P +HY CMVDLLGR+G L EA
Sbjct: 565 KPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAI 624
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ +MPF+ DA W LG+CR++ T+L E AA++I E EP + Y+LLSNLYA G
Sbjct: 625 EFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEG 684
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW DV+ +R M+ + + K G SW+EV+N+VH F VGDTLHP+ +IY L+EL K+K
Sbjct: 685 RWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIK 744
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
G+V +T VLHDV +E+KE L HSEKLAVA+ ++S P +PIRV KNLRVC DCH
Sbjct: 745 NVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHT 804
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK+IS + GR I++RD NRFHH G+CSC DYW
Sbjct: 805 AIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 190/379 (50%), Gaps = 26/379 (6%)
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLA 264
ES N ++++ + L+ ++ K K + ++ D + N++IT Y+++N
Sbjct: 45 ESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPI 104
Query: 265 EAQRLFE--EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMI- 316
A +F+ E +DV ++++++S + N +A +FD + ++ V + A+I
Sbjct: 105 TAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIR 164
Query: 317 ----AGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
G+ +T L F++ C + + G + + ++ AR +FD+M +
Sbjct: 165 ACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLA-DLESARKVFDKMRE 223
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ ++W +I AQ GY+++++ LF+EM G +R T ++S CA + L LGK+
Sbjct: 224 KNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKE 283
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
LH +++ G VG +L+ MY KCG V+EA F+ + + +V+SW ++ GY R G
Sbjct: 284 LHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGG 343
Query: 488 G--KDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
G ++A+ +F +M G+ P+ T G+L AC+ + G E + G+
Sbjct: 344 GYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG-EQVHGQTIKLGLSAIDC 402
Query: 545 HYTCMVDLLGRAGRLDEAQ 563
+V + ++GR++ A+
Sbjct: 403 VGNGLVSVYAKSGRMESAR 421
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 123/564 (21%), Positives = 225/564 (39%), Gaps = 150/564 (26%)
Query: 5 NRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGD------ 58
N +QLH + T ++ +S N S LK+ + +K+ + K
Sbjct: 27 NNPQQLHKAIT----TLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSN 82
Query: 59 --WDIRQWNVAITTHMRNGCCDSALHVFNSM--PRRSSVSYNAMISGYLLNGQLDPARQV 114
D N IT + ++ +A +F SM +R VSY+++IS + N A ++
Sbjct: 83 LPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEM 142
Query: 115 FDQMPQRDLVSWN--------------------------VMISGY--------------- 133
FDQ+ +D V N V+ +GY
Sbjct: 143 FDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMF 202
Query: 134 VRNKSLS---AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-----NE 185
V+ SL+ +AR +F+ M +++VV+W M++ AQ GY D A +F ML +
Sbjct: 203 VKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDR 262
Query: 186 ISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+ GL++ ++ G+ E + S ++ SL+ + K + +A+ +FD
Sbjct: 263 FTLTGLISVCAEIQFLSLGK-ELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFD 321
Query: 241 RMPVRDEVSWNTMITGYAQ--NNYLAEAQRLFEEAPVK-----DVFTWT----------- 282
M + +SW ++ GY + Y EA R+F ++ + FT++
Sbjct: 322 GMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPD 381
Query: 283 ------------------------AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM--- 315
+VS Y ++G+++ AR FD + EKN VS +
Sbjct: 382 FDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDT 441
Query: 316 -IAGYVQTKRMDMAREL------------------------------FEAMTCK-----N 339
+ + D+ RE+ AM K +
Sbjct: 442 NVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTD 501
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
++ N +I+ Y++ G A +F+ M + I+W +II G+A+ G++ +L LF M
Sbjct: 502 LSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLE 561
Query: 400 YGERLNRSPFTSVLSTCANLASLE 423
G + N + +VLS C+++ ++
Sbjct: 562 TGVKPNDVTYIAVLSACSHVGLID 585
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQ----RDLVSWNVMISGYVRNKSLSAARNLF 146
SS +Y +++SG G + Q+ + + DL N +IS Y + + AA +F
Sbjct: 466 SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVF 525
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIE 202
M +V++W ++++G+A++G+A A +F MLE N++++ +L+A G I+
Sbjct: 526 NDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLID 585
Query: 203 EACMLFES-KANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITG 256
EA F S + N +V + ++ + L +A + MP D + W T +
Sbjct: 586 EAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGS 645
Query: 257 --YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+N L E A+ + E P D T+ + + Y G+ ++ I M +K
Sbjct: 646 CRVHRNTKLGEHAAKMILEREP-HDPATYILLSNLYATEGRWEDVAAIRKNMKQK 699
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/661 (38%), Positives = 388/661 (58%), Gaps = 23/661 (3%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAA 194
L A ++FE + +++ WNTML G A + + ++ RM+ N ++ LL +
Sbjct: 33 LPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKS 92
Query: 195 YVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
++ EE + + + + SL+ + + RL DA+ +FD RD VS
Sbjct: 93 CAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSC 152
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------ 304
+ITGYA + A+++F+ +DV +W AM++GYV+N +EA +F M
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVR 212
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHA 359
P++ T+ ++++ Q+ +++ RE+ + ++ N I Y++ G++ A
Sbjct: 213 PDEGTLV--SVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIA 270
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
LF+ + D +SW +I GY +++L LF EM R GE N SVL CA+L
Sbjct: 271 SGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 330
Query: 420 ASLELGKQLHGQLVK--VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
++++G+ +H + K G G + +L+ MY KCG +E A+ F ++ K + SWN
Sbjct: 331 GAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNA 390
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI G+A HG A LF M+ GI+PDDIT+VG+LSACSH+GL++ G F S+ +DY
Sbjct: 391 MIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDY 450
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ P +HY CM+DLLG AG EA+ ++ MP EPD W +LL AC+++G ELAE
Sbjct: 451 NITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESF 510
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
A+ + E+EPEN+G YVLLSN+YA +GRW DV+++R + +G+KKV G S +E+ + VH
Sbjct: 511 AQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHE 570
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F +GD LHP+ IY LEE++ L++ GFV T VL ++ EE KE LR+HSEKLA+A
Sbjct: 571 FIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 630
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G++S G + V+KNLRVC +CH A K ISKI R I+ RD RFHHF G CSC DY
Sbjct: 631 FGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDY 690
Query: 778 W 778
W
Sbjct: 691 W 691
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 198/416 (47%), Gaps = 49/416 (11%)
Query: 4 NNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQ 63
N LR L SS L + R+ S + P+ T L S +++K G RQ
Sbjct: 52 NTMLRGLASSSDLVSPLEMYVRMVSXGHV---PNAYTFPFLLKSCAKSKTFEEG----RQ 104
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+ + M+ GC ++ ++IS Y NG+L+ AR+VFD QRD+
Sbjct: 105 IHAQV---MKLGC------------ELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDV 149
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
VS +I+GY + +AR +F+ + +RDVVSWN M++GY +N + A +F M+
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRT 209
Query: 184 N----EISWNGLLAAYVQNGRIE---EACMLFESK----ANWEVVSWNSLMGGFVKQKRL 232
N E + +L+A Q+G IE E L + ++ ++V N+ +G + K +
Sbjct: 210 NVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIV--NAFIGLYSKCGDV 267
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGY 288
A +F+ + +D VSWNT+I GY N EA LF+E + T +++
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 327
Query: 289 VQNGKVDEARMIFDAMPEK------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G +D R I + ++ + ++I Y + ++ A ++F +M K+++S
Sbjct: 328 AHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSS 387
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLF 394
WN MI G+A G A +LF RM ++ D I+ +++ + SG + +F
Sbjct: 388 WNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIF 443
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 157/361 (43%), Gaps = 35/361 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ IT + G SA VF+ + R VS+NAMI+GY+ N + A ++F +M
Sbjct: 148 DVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM 207
Query: 120 QRD-------LVSWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQN 167
+ + LVS ++S ++ S+ R + ++ + N + Y++
Sbjct: 208 RTNVRPDEGTLVS---VLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKC 264
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLM 223
G + A +F+ + K+ +SWN L+ Y +EA +LF+ S + V+ S++
Sbjct: 265 GDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVL 324
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWN------TMITGYAQNNYLAEAQRLFEEAPVKD 277
+ +WI + R + N ++I YA+ + A ++F K
Sbjct: 325 PACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKS 384
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFE 333
+ +W AM+ G+ +G+ + A +F M E + ++ +++ + +D+ R +F+
Sbjct: 385 LSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFK 444
Query: 334 AMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYS 387
++T + + MI +G A + MP + D + W +++ G
Sbjct: 445 SVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNL 504
Query: 388 E 388
E
Sbjct: 505 E 505
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 288/812 (35%), Positives = 418/812 (51%), Gaps = 128/812 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRR---------SSVSYNAMISGYLLNGQLDPARQVF 115
N+ I T R C N RR SS N ++S G++D AR++F
Sbjct: 5 NLGIYTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLF 64
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
D MP RD SWN MI Y + L+ AR LF P R ++W++++SGY + G A
Sbjct: 65 DVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALE 124
Query: 176 IFDRML----EKNEISWNGLL---AAYV---QNGRIEEACMLFESKANWEVVSWNSLMGG 225
+F M N+ +W +L + YV + +I + + +N VV+ L+
Sbjct: 125 LFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVT--GLVDM 182
Query: 226 FVKQKRLGDAKWIFDRMP-VRDEVSWNTMITGYAQNNYLAEAQRLFEE------------ 272
+ K K + +A+++F+ P R+ V W M+TGY+QN +A F +
Sbjct: 183 YAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFT 242
Query: 273 -----------------APVK----------DVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
A V +VF +A+V Y + G + AR + + M
Sbjct: 243 FPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETME 302
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-------------NVASW--------- 343
+ VSWN+MI G V+ + A LF M + N S+
Sbjct: 303 VDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMS 362
Query: 344 -----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
N ++ YA+ G +A ++F++M D ISW +++ G +G
Sbjct: 363 VHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGS 422
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E++LRLF EM+ G ++ +VLS CA L LE GKQ+H +K G + V N+
Sbjct: 423 YEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNS 482
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG +E+A F+ + +DVI+W +I GYA++G G+D
Sbjct: 483 LVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD---------------- 526
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
H GLVE G YF SM YG+ P +HY CM+DLLGR+G+L EA+ L+
Sbjct: 527 ------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELL 574
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
M +PDA W ALL ACR++G EL E+AA +FE+EP+NA YVLLSNLY+A+G+W
Sbjct: 575 NQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWE 634
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+ +K R M+ RGV K G SW+E+ +KVH F D HP IY+ ++E+ +K+ G
Sbjct: 635 EAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAG 694
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V LHD+ EE KE L YHSEKLAVA+G+L++P G PIR+ KNLR+C DCH A+K
Sbjct: 695 YVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMK 754
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S + R +ILRD+N FHHF G+CSC DYW
Sbjct: 755 YVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 143/331 (43%), Gaps = 38/331 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D WN I +R G + AL +F M R +Y ++++ + + A V
Sbjct: 305 DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVH 364
Query: 116 DQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + ++ N ++ Y + A ++FE M +DV+SW ++++G NG +
Sbjct: 365 SLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYE 424
Query: 172 AARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLM 223
A R+F M + ++I +L+A + +E +S + NSL+
Sbjct: 425 EALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLV 484
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN--------------NYLAEAQRL 269
+ K + DA +FD M ++D ++W +I GYAQN +Y + +
Sbjct: 485 SMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEV 544
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM- 327
+ P + + M+ ++GK+ EA+ + + M + + W A++A +++
Sbjct: 545 YGIKPGPE--HYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELG 602
Query: 328 ---ARELFEAMTCKNVASWNTMITGYAQSGE 355
A LFE + KN + + Y+ +G+
Sbjct: 603 ERAANNLFE-LEPKNAVPYVLLSNLYSAAGK 632
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
RLN +T C L EL + + G N +L KCG V++A
Sbjct: 3 RLNLGIYTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARK 62
Query: 463 AFEEIVDKDVISWNTM-------------------------------IAGYARHGFGKDA 491
F+ + D+D SWNTM I+GY R+G +A
Sbjct: 63 LFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEA 122
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMV 550
L LF M+ G +P+ T +L CS L+EKG + + +++ + N+ T +V
Sbjct: 123 LELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFD--SNAFVVTGLV 180
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
D+ + + EA+ L + P + + W A++ Y + KA E +M E
Sbjct: 181 DMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG---YSQNGDGHKAIECFRDMRGE 234
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/677 (36%), Positives = 391/677 (57%), Gaps = 15/677 (2%)
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
Q P+ S N +++N+ L +AR +F +P V + +L YA N A +
Sbjct: 51 QNPKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINL 110
Query: 177 FDRMLE--KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
F+++ K+ ISWN ++ A + A LF+ +SW +++ GF+ R+ +
Sbjct: 111 FNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNE 170
Query: 235 AKWIFDRMPV--RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
A+ F+ MP +D +WN M+ GY N + +A RLF + P +DV +WT+++ G +NG
Sbjct: 171 AERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNG 230
Query: 293 KVDEARMIFDAMPEKNTV--SWNAMIAGYVQTKRM-------DMARELFEAMTCKNVASW 343
K +A F M + V S ++ G ++ + +F+ C + +
Sbjct: 231 KSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEF 290
Query: 344 --NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+++T YA + A +F + + W A++ G + ++L +F EM R+
Sbjct: 291 VSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFN 350
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
N S FTS L++C L LE G+ +H +K+G E + GN+L+VMY KCG + +A
Sbjct: 351 VVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDAL 410
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ I +K+V+SWN++I G A+HG G AL+LF+ M G++ D+IT+ G+LSACS +G
Sbjct: 411 CVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSG 470
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+++K +F R + +HY CMVD+LGR G ++EA+ L +MP E ++ W L
Sbjct: 471 MLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVL 530
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
L ACR++ ++AE+AA+ IFEMEP+ + YVLLSNLYA+S RW +V+++R+KM+ G+
Sbjct: 531 LSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIV 590
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G SW+ ++ H F D HP + IY L L KL++ G++ + LHDV E
Sbjct: 591 KQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALHDVEIE 650
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
+ E ML YHSE+LA+A+G+LS G I +MKNLRVC DCH AI ++KIV R I++RD+
Sbjct: 651 QNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNREIVVRDS 710
Query: 762 NRFHHFSGGSCSCGDYW 778
+RFHHF G CSCGDYW
Sbjct: 711 SRFHHFKNGICSCGDYW 727
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 211/491 (42%), Gaps = 75/491 (15%)
Query: 36 PSKKTLKRHLNSKSR------NKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR 89
PS + HL ++ PK + N H++N DSA VFN +P
Sbjct: 30 PSPNQITTHLKCRTTPFTTLIQNPKSSST----SLNFTFLNHLKNQKLDSARAVFNKIPS 85
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQ--RDLVSWNVMISGYVRNKSLSAARNLFE 147
Y ++ Y N L A +F+Q+P +D +SWN +I + A LF+
Sbjct: 86 PHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFD 145
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM--LEKNEISWNGLLAAYVQNGRIEEAC 205
MP+R+ +SW T++ G+ G + A R F+ M ++K+ +WN ++ Y NGR+ +A
Sbjct: 146 EMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDAL 205
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP---------------------- 243
LF + +V+SW S++ G + + A + F M
Sbjct: 206 RLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKI 265
Query: 244 --------------------VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
DE +++T YA + +A ++F E K+V WTA
Sbjct: 266 LDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTA 325
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTV----SWNAMIAGYVQTKRMDMARELFEA---MT 336
+++G N K EA +F M N V S+ + + V + ++ R + A M
Sbjct: 326 LLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMG 385
Query: 337 CKN-VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
+N V + N+++ Y++ G I A +F + + + +SW ++I G AQ G +L LF
Sbjct: 386 LENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFK 445
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-----VKVGFEA-GCFVGNALLV 449
EM R G + T +LS C+ L+ + G +K+ E C V
Sbjct: 446 EMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVD----- 500
Query: 450 MYCKCGSVEEA 460
+ +CG VEEA
Sbjct: 501 VLGRCGEVEEA 511
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/737 (36%), Positives = 416/737 (56%), Gaps = 89/737 (12%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML-----EK 183
+++ Y +S +R F+ + ++DV +WN+M+S Y +NG+ A F ++L +
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173
Query: 184 NEISWNGLLAA--YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ ++ +L A + +GR + C +F+ W+V SL+ + + +G A+ +FD
Sbjct: 174 DFYTFPPVLKACQTLVDGR-KIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDD 232
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------------------APVKDVFTW 281
MP RD SWN MI+G QN A+A + +E A + D+ T
Sbjct: 233 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTA 292
Query: 282 T-------------------AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
T A+++ Y + G + +A+ +F M ++ VSWN++IA Y Q
Sbjct: 293 TLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQN 352
Query: 323 KRMDMARELF----------EAMTCKNVAS----------------------W------- 343
AR F + +T ++AS W
Sbjct: 353 DDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVI 412
Query: 344 -NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N ++ YA+ G I A +F+ +P D +SW +I+GY Q+G + +++ ++ M+ E
Sbjct: 413 GNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECRE 472
Query: 403 -RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+LN+ + S+L+ A++ +L+ G ++HG L+K FVG L+ +Y KCG + +A
Sbjct: 473 IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAM 532
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F ++ + + WN +I+ + HG G+ AL LF M+ G+KPD +T + +LSACSH+G
Sbjct: 533 CLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSG 592
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV++G ++F+ + ++YG+ P+ KHY CMVDLLGRAG L+ A + +K+MP PDA+ WGAL
Sbjct: 593 LVDEG-KWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGAL 651
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++G EL + A++ +FE++ EN G YVLLSN+YA G+W V KVR R+RG+K
Sbjct: 652 LGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK 711
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G+S +EV +V F G+ HP+ IYA L L K+K G++ VL DV E+
Sbjct: 712 KTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEED 771
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EKEH+L HSE+LA+A+GI+S P IR+ KNLRVC DCHNA K IS+I R I++RD+
Sbjct: 772 EKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDS 831
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHHF G CSCGDYW
Sbjct: 832 KRFHHFKNGICSCGDYW 848
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 210/482 (43%), Gaps = 81/482 (16%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WD+ I + R G A +F+ MP R S+NAMISG + NG A V D+M
Sbjct: 205 WDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM 264
Query: 119 P---------------------------------------QRDLVSWNVMISGYVRNKSL 139
+ +L N +I+ Y + +L
Sbjct: 265 RLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNL 324
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGL--LA 193
A+ +F+ M RDVVSWN++++ Y QN AR F +M LE + ++ L +A
Sbjct: 325 GDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIA 384
Query: 194 AYVQNGRIEEACMLFESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
A ++ + + F + W VV N++M + K + A +F+ +PV+D VSW
Sbjct: 385 AQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSW 444
Query: 251 NTMITGYAQNNYLAEA---QRLFEEA-PVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
NT+I+GY QN +EA R+ EE +K + TW ++++ Y G + + I
Sbjct: 445 NTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRI----- 499
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+ + N + +V T +D+ Y + G + A LF +
Sbjct: 500 HGHLIKTNLHLDVFVGTCLIDL----------------------YGKCGRLVDAMCLFYQ 537
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
+P+ + W AII+ + G+ E +L+LF EM+ G + + F S+LS C++ ++ G
Sbjct: 538 VPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEG 597
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYAR 484
K + + G + ++ + + G +E AY +++ + D W ++
Sbjct: 598 KWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRI 657
Query: 485 HG 486
HG
Sbjct: 658 HG 659
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 173/369 (46%), Gaps = 29/369 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
NA+I+ Y G L A++VF QM RD+VSWN +I+ Y +N AR F M +
Sbjct: 312 NALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLE 371
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN-----EISWNGLLAAYVQNGRIEEACM 206
D+++ ++ S AQ+ +R + ++ + + N ++ Y + G I+ A
Sbjct: 372 PDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHK 431
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV-----SWNTMITGYAQNN 261
+F +VVSWN+L+ G+ + +A ++ M E+ +W +++ YA
Sbjct: 432 VFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVG 491
Query: 262 YLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
L + R L + DVF T ++ Y + G++ +A +F +P +++V WNA+I+
Sbjct: 492 ALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIIS 551
Query: 318 GYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQH---- 369
+ + A +LF M + V ++ ++++ + SG + + F M ++
Sbjct: 552 CHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKP 611
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ ++ ++G+ E + +M + + S + ++L C ++ELGK
Sbjct: 612 SLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPD---ASIWGALLGACRIHGNIELGKFAS 668
Query: 430 GQLVKVGFE 438
+L +V E
Sbjct: 669 DRLFEVDSE 677
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 13/227 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F S+ +C L K+LH LV G F+ L+ +Y G V + F++I
Sbjct: 79 FNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQ 135
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGT 527
KDV +WN+MI+ Y R+G ++A+ F + V + D T +L AC K
Sbjct: 136 RKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIH 195
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+ + + + V + ++ + R G + A++L +MPF D +W A++
Sbjct: 196 CWVFKLGFQWDVFVAAS----LIHMYSRFGFVGIARSLFDDMPFR-DMGSWNAMISGLIQ 250
Query: 588 YGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWGDVSKVRL 633
G A +A +V+ EM E M V ++++ + GD+S L
Sbjct: 251 NGN---AAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATL 294
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 131/306 (42%), Gaps = 24/306 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ-RDL 123
N + + + G DSA VFN +P + VS+N +ISGY NG A +V+ M + R++
Sbjct: 414 NAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREI 473
Query: 124 V----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARR 175
+W +++ Y +L + + K DV ++ Y + G A
Sbjct: 474 KLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMC 533
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKR 231
+F ++ ++ + WN +++ + +G E+A LF + V V++ SL+
Sbjct: 534 LFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGL 593
Query: 232 LGDAKWIFDRMP---VRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPV-KDVFTWTAMVS 286
+ + KW F M ++ + + M+ + +L A ++ P+ D W A++
Sbjct: 594 VDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLG 653
Query: 287 GYVQNGKVDEARMIFDAMPEKNT------VSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+G ++ + D + E ++ V + + A + + +D R L K
Sbjct: 654 ACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKT 713
Query: 341 ASWNTM 346
W+++
Sbjct: 714 PGWSSI 719
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 118/282 (41%), Gaps = 28/282 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN-----AMISGYLLNGQLDPARQV 114
D+ WN I+ + +NG A+ V+ M + N ++++ Y G L ++
Sbjct: 440 DVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRI 499
Query: 115 FDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ + D+ +I Y + L A LF +P+ V WN ++S + +G+
Sbjct: 500 HGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHG 559
Query: 171 DAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
+ A ++F M ++ + +++ LL+A +G ++E F + + G
Sbjct: 560 EKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCM 619
Query: 227 VK-QKRLGDAKWIFD---RMPVRDEVS-WNTM-----ITGYAQNNYLAEAQRLFEEAPVK 276
V R G + +D MP+ + S W + I G + A + RLF E +
Sbjct: 620 VDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFA-SDRLF-EVDSE 677
Query: 277 DVFTWTAMVSGYVQNGK---VDEARMIFDAMPEKNTVSWNAM 315
+V + + + Y GK VD+ R + K T W+++
Sbjct: 678 NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSI 719
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/551 (42%), Positives = 347/551 (62%), Gaps = 2/551 (0%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGR 200
AR LF+ P DVVSW ++S YA+ G AR +FDR +N ++W LL+ Y +
Sbjct: 61 ARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARL 120
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++EA LF+ VVSWN+++ + R+GDA +FDRMPVRD SWN ++ ++
Sbjct: 121 VDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRS 180
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
+ +A+ LF P +DV WT MV G ++GKVDEAR++FD+MPE+N VSWNAMI+GY
Sbjct: 181 GSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYT 240
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ R+D A +LF M +++AS N M+TG+ Q+ ++ AR LFD MP+ + ++W ++ G
Sbjct: 241 RNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNG 300
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Y + SE +L LF M G R N+ F L C++LA+L GKQ+H + K F+
Sbjct: 301 YLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFD 360
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
FV +AL+ +Y KCG + A F+ +KD+ISWN +IA YA HG G +A++L+E M+
Sbjct: 361 AFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQE 420
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G +P+D+T V +LSACSH+GLV++G + F SM D + +HYTC++DL RAGRLD
Sbjct: 421 NGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLD 480
Query: 561 EAQNLMKNMPFEP-DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
+A+ L+ + +P + W ALLG C +G + AA + + EP+NAG Y LLSN+Y
Sbjct: 481 DAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIY 540
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A++G+W + +++R +M +RG+KK G SW+EV NKVH F D H E D IY L+ +
Sbjct: 541 ASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNIH 600
Query: 680 FKLKQDGFVYS 690
++ G V S
Sbjct: 601 HMMRIVGTVPS 611
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 217/394 (55%), Gaps = 40/394 (10%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISGYVRNKS 138
A +F+ P VS+ A++S Y G L AR++FD+ +R++V+W ++SGY R +
Sbjct: 61 ARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARL 120
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ A LF+ MP+R+VVSWNTML YA G A +FDRM ++ SWN LLA V++
Sbjct: 121 VDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRS 180
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
G +++A LF +V++W +++ G + ++ +A+ +FD MP R+ VSWN MI+GY
Sbjct: 181 GSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYT 240
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
+N+ + EA LF + P +D+ + MV+G++QN + AR +FD MPE+N V+W M+ G
Sbjct: 241 RNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNG 300
Query: 319 YVQTKRMDMARELFEAM-----------------TCKNVASW------------------ 343
Y++ K+ ++A LF M C ++A+
Sbjct: 301 YLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFD 360
Query: 344 ----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+ ++ YA+ GEI AR LFD + D ISW IIA YA G +++ L+ +M+
Sbjct: 361 AFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQE 420
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
G R N + +LS C++ ++ G ++ +V
Sbjct: 421 NGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMV 454
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 205/394 (52%), Gaps = 25/394 (6%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
+P ++ W ++ + R D A +F MP+R+ VS+N M+ Y G++ A
Sbjct: 98 RPDARRNVVTWTALLSGYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACA 157
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+FD+MP RD SWN++++ VR+ S+ AR LF MP+RDV++W TM+ G A++G D A
Sbjct: 158 LFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEA 217
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
R +FD M E+N +SWN +++ Y +N RI+EA LF ++ S N ++ GF++ K L
Sbjct: 218 RVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLK 277
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE------EAPVKDVF-------- 279
A+ +FD MP R+ V+W TM+ GY + A LF P + F
Sbjct: 278 RARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACS 337
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
A+ G + + + FDA E +A++ Y + + +AR+LF+ K+
Sbjct: 338 DLAALCEGKQVHQMICKTTFQFDAFVE------SALMNVYAKCGEIGLARKLFDLSREKD 391
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFI 395
+ SWN +I YA G A L+++M ++ + +++ +++ + SG ++ L++F
Sbjct: 392 LISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFE 451
Query: 396 EMKRYGERLNRSP-FTSVLSTCANLASLELGKQL 428
M R +T ++ C+ L+ K+L
Sbjct: 452 SMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRL 485
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 291/792 (36%), Positives = 413/792 (52%), Gaps = 127/792 (16%)
Query: 99 ISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
IS + L RQV Q ++V N +I Y ++L A LF+ M RD
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG-RIEEACMLFESKAN 213
VSW+ M+ G+A+ G + I+ G ++ G R + + F +A
Sbjct: 145 VSWSVMVGGFAKVG---------------DYINCFGTFRELIRCGARPDNYTLPFVIRAC 189
Query: 214 WEVVSWN-SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
++ + +L+ +VK + + DA+++FD+M RD V+W MI GYA+ E+ LFE+
Sbjct: 190 RDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 249
Query: 273 ------APVK---------------------------------DVFTWTAMVSGYVQNGK 293
P K DV TAM+ Y + G
Sbjct: 250 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 309
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGY--------------------VQTKRMDMARELFE 333
V+ AR IFD M EKN +SW+AMIA Y + ++ +A L+
Sbjct: 310 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 369
Query: 334 AMTCKNV---------ASWNTMITGYAQSGEITH----------ARNLFDRMPQHDCISW 374
+ C+N+ AS + M+ + ++ H A LFD M D +SW
Sbjct: 370 CINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSW 429
Query: 375 AAIIAGYAQ----------------------------SGYSEDSLRLFIEMKRYGERLNR 406
+ ++ G+A+ G + +SL LF +M+ G ++
Sbjct: 430 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDK 489
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+V+ CA L ++ + + + + F+ +G A++ M+ KCG VE A F+
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 549
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ +K+VISW+ MIA Y HG G+ AL LF M GI P+ IT+V +L ACSH GLVE+G
Sbjct: 550 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 609
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+F M DY V + KHYTC+VDLLGRAGRLDEA L+++M E D WGA LGACR
Sbjct: 610 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACR 669
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
+ LAEKAA + E++P+N G Y+LLSN+YA +GRW DV+K R M R +KK+ G+
Sbjct: 670 THKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGW 729
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHM 706
+W+EV NK H FSVGDT HP IY L+ L KL+ G+V T VLHDV EE K +
Sbjct: 730 TWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGI 789
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
L HSEKLA+A+G+++ P PIR++KNLRVC DCH K +S I GR+II+RD NRFHH
Sbjct: 790 LYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHH 849
Query: 767 FSGGSCSCGDYW 778
F G+CSCGDYW
Sbjct: 850 FKEGACSCGDYW 861
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 162/378 (42%), Gaps = 58/378 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ I + + GC +SA +F+ M ++ +S++AMI+ Y +GQ A +F M
Sbjct: 293 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMML 352
Query: 120 QR----DLVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYAD 171
D ++ ++ + ++L+ R + ++++ N ++ Y+ D
Sbjct: 353 SSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALD 412
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
A +FD M ++ +SW+ ++ + + G + + G F + R
Sbjct: 413 DAYGLFDGMCVRDSVSWSVMVGGFAKVG------------------DYMNCFGTFRELIR 454
Query: 232 LG---------------DAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
G ++ +FD+M V D+V+ T++ A+ + +A+ + +
Sbjct: 455 CGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 514
Query: 273 APVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
K DV TAM+ + + G V+ AR IFD M EKN +SW+AMIA Y + A
Sbjct: 515 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 574
Query: 329 RELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRM-----PQHDCISWAAIIA 379
+LF M N + +++ + +G + F M + D + ++
Sbjct: 575 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 634
Query: 380 GYAQSGYSEDSLRLFIEM 397
++G +++L+L M
Sbjct: 635 LLGRAGRLDEALKLIESM 652
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 32/234 (13%)
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+RLN + S L C NL + +Q+H Q G V N L+ Y ++++AY
Sbjct: 77 QRLNPKFYISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAY 133
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + +D +SW+ M+ G+A+ G + F + G +PD+ T+ ++ AC
Sbjct: 134 GLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC---- 189
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
RD + + +VD+ + +++A+ L M E D TW +
Sbjct: 190 -------------RDLKNLQMA-----LVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVM 230
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGM--YVLLSNLYAASGRWGDVSKVRL 633
+G GK + V+FE E + V + + A + G + K R+
Sbjct: 231 IGGYAECGKA----NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARI 280
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ I H + GC +SA +F+ M ++ +S++AMI+ Y +GQ A +F M
Sbjct: 523 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 582
Query: 120 QRDLVSWNVMISGYVRNKS----LSAARNLFEMM-----PKRDVVSWNTMLSGYAQNGYA 170
+ ++ + + + S + F +M + DV + ++ + G
Sbjct: 583 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRL 642
Query: 171 DAARRIFDRM-LEKNEISWNGLLAA 194
D A ++ + M +EK+E W L A
Sbjct: 643 DEALKLIESMTVEKDEGLWGAFLGA 667
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/573 (40%), Positives = 358/573 (62%), Gaps = 4/573 (0%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G + AR++FD+MP D VS+ MI+ Y++N L A LF+ MP R +V+ + M+ GYA
Sbjct: 83 GNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYA 142
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ G D+A+++FD M++ N SW L++ Y ++G++ +AC LF+ VVSW +++ G
Sbjct: 143 KAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLG 202
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+ + + A+ +F++MP ++ +SW M+ Y N EA +LF E P +++++W M+
Sbjct: 203 YARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMI 262
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
SG + +V+EA +F MP +N VSW M++G + +ARE F+ M K++A+WN
Sbjct: 263 SGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNA 322
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MIT Y I A LF+ M + + ++W A+I GYA+ ++++ I M R R N
Sbjct: 323 MITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPN 382
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+ T +L++C + LEL Q H + VG E + NAL+ MY + G + + AFE
Sbjct: 383 ETTMTIILTSCWGM--LEL-MQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFE 439
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ KDV+SW M+ + HG G AL +F M G KPD+IT VG+LSACSH GLV+K
Sbjct: 440 SLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKK 499
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP-FEPDAATWGALLGA 584
G + F SM+R YG+ P ++HY+C+VD+LGRAG++ EA +++ MP E D A GALLGA
Sbjct: 500 GQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGA 559
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CRL+G E+A+ + + E++P ++G YVLL+N++AA G W + ++VR KM+DR V+KV
Sbjct: 560 CRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVP 619
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
G+S +EV+ K H F GD HP+ + IY L E
Sbjct: 620 GFSQIEVKGKCHAFFAGDKSHPQVEEIYELLRE 652
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 233/438 (53%), Gaps = 37/438 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D + IT +++N A +F +MP R+ V+ +AMI GY G +D A++VFD M
Sbjct: 99 DNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMI 158
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
++ SW +ISGY R+ ++ A LF+ MP ++VVSW TM+ GYA+NG D AR +F++
Sbjct: 159 DTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQ 218
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M EKN ISW ++ +YV NGR +EA LF + SWN+++ G + KR+ +A +F
Sbjct: 219 MPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLF 278
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
MP+R+ VSW M++G A+N + A+ F++ P KD+ W AM++ YV + EA
Sbjct: 279 HLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASE 338
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKR--------MDMARELFE----AMTCKNVASW---- 343
+F+ M E+N V+WNAMI GY + + + M R MT + W
Sbjct: 339 LFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLE 398
Query: 344 --------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
N +IT Y++ G+I+ +R F+ + D +SW A++ +
Sbjct: 399 LMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTY 458
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCF 442
G+ + +L +F M + G + + F VLS C++ ++ G++L + + G E
Sbjct: 459 HGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAE 518
Query: 443 VGNALLVMYCKCGSVEEA 460
+ L+ + + G V EA
Sbjct: 519 HYSCLVDILGRAGQVHEA 536
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 249/516 (48%), Gaps = 73/516 (14%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
D+ + N +S + G AR++FD M + +S+ ++ AY++N + +A LF++
Sbjct: 68 DIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMP 127
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ +V+ ++++ G+ K + A+ +FD M + SW ++I+GY ++ +A+A +LF++
Sbjct: 128 DRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQ 187
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
P K+V +WT MV GY +NG +D+AR +F+ MPEKNT+SW AM+ YV R D A +LF
Sbjct: 188 MPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLF 247
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
M +N+ SWNTMI+G + A LF MP + +SW +++G A++G+++ +
Sbjct: 248 HEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLARE 307
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
F +M ++A+ NA++ Y
Sbjct: 308 YFDQMPN-----------------KDIAAW----------------------NAMITAYV 328
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+ EA F + ++++++WN MI GYARH +A+ M I+P++ TM
Sbjct: 329 DECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTI 388
Query: 513 ILSAC--------SHTGLVEKGTE-------YFYSMNRDYGVIPNSK------------H 545
IL++C +H + G E +M G I +S+
Sbjct: 389 ILTSCWGMLELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVS 448
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNM---PFEPDAATWGALLGACRLYGKTELAEKAAEVI- 601
+T M+ G D A ++ +M +PD T+ +L AC G + +K + +
Sbjct: 449 WTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMS 508
Query: 602 --FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
+ +EP A Y L ++ +G+ + V KM
Sbjct: 509 RAYGLEPR-AEHYSCLVDILGRAGQVHEAMDVVWKM 543
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 183/356 (51%), Gaps = 14/356 (3%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ W I+ + R+G A +F+ MP ++ VS+ M+ GY NG +D AR VF+Q
Sbjct: 159 DTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQ 218
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+++ +SW M+ YV N A LF MP+R++ SWNTM+SG + A ++F
Sbjct: 219 MPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLF 278
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
M +N +SW +++ +NG + A F+ N ++ +WN+++ +V + + +A
Sbjct: 279 HLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASE 338
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVS---GYVQ 290
+F+ M R+ V+WN MI GYA++ EA + + + T T +++ G ++
Sbjct: 339 LFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLE 398
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
+ ++ E T NA+I Y + + +R FE++ K+V SW M+ +
Sbjct: 399 LMQAHALAIVVGC--ECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAF 456
Query: 351 AQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YG 401
G HA ++F M + D I++ +++ + +G + +LF M R YG
Sbjct: 457 TYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYG 512
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 195/418 (46%), Gaps = 41/418 (9%)
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
R V D + N I+ + + A++LF+E P D ++TAM++ Y++N ++ +A +
Sbjct: 63 RSTVLDIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKL 122
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
F MP++ V+ +AMI GY + MD A+++F+AM NV SW ++I+GY + G++ A
Sbjct: 123 FQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKAC 182
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LFD+MP + +SW ++ GYA++G + + +F +M N +T+++ + +
Sbjct: 183 QLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEK----NTISWTAMMKSYVDNG 238
Query: 421 SLELGKQLHGQLVKVGFE------AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
+ +L ++ + +GC G V EA+ F + ++ +S
Sbjct: 239 RTDEALKLFHEMPQRNLYSWNTMISGCLDGK----------RVNEAFKLFHLMPLRNAVS 288
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W M++G AR+GF K A F+ M I + + + C L+ + +E F M
Sbjct: 289 WTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDEC----LIVEASELFNLMT 344
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQN---LMKNMPFEPDAATWGALLGACRLYGKT 591
N + M+D R EA LM P+ T +L +C +G
Sbjct: 345 ER-----NIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSC--WGML 397
Query: 592 ELAEK-AAEVIFEMEPENAGMYVLLSN-LYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
EL + A ++ E E + LSN L R GD+S R+ K V ++
Sbjct: 398 ELMQAHALAIVVGCECETS-----LSNALITMYSRIGDISSSRIAFESLKAKDVVSWT 450
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 276/750 (36%), Positives = 416/750 (55%), Gaps = 76/750 (10%)
Query: 76 CCDSALH---VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR---DLVSWNVM 129
CC ALH N V NA+++ Y G L+ A VFD++ ++ D++SWN +
Sbjct: 166 CCGRALHGLICCNGFESNVFVC-NALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSI 224
Query: 130 ISGYVRNKSLSAARNLFEMMP----------KRDVVSWNTMLSGYAQNGYADAARRIFDR 179
++ +V+ + A LF M + D++S +L A A+ + +
Sbjct: 225 VAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILP-------ACASLKALPQ 277
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
+ E + + ++NG +A + N+L+ + K + DA +F
Sbjct: 278 IKEIHSYA--------IRNGTFADAFVC------------NALIDTYAKCGSMNDAVKVF 317
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVD 295
+ M +D VSWN M+TGY Q+ A LFE E DV TW+A+++GY Q G
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQ 377
Query: 296 EA-----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-------- 342
EA +MI D E N+V+ ++++ + E+ K + S
Sbjct: 378 EALDAFQQMILDG-SEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGD 436
Query: 343 --------WNTMITGYAQSGEITHARNLFDRMP--QHDCISWAAIIAGYAQSGYSEDSLR 392
+N +I Y++ AR++FD +P + + ++W +I GYAQ G S D+L+
Sbjct: 437 GDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALK 496
Query: 393 LFIEM--KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGC-FVGNALL 448
+F EM K Y N + +L CA+LA+L +GKQ+H + + +E FV N L+
Sbjct: 497 IFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLI 556
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG V+ A + F+ + ++ +SW +M++GY HG GK+AL +F+ M+ G PDDI
Sbjct: 557 DMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
+ + +L ACSH+G+V++G YF M RDY V+ +++HY C++DLL R GRLD+A ++
Sbjct: 617 SFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQE 676
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MP EP A W ALL ACR++ ELAE A + M+ EN G Y L+SN+YA + RW DV
Sbjct: 677 MPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDV 736
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+++R M+ G+KK G SW++ + +F VGD HP IY+ LE L ++K G+V
Sbjct: 737 ARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYV 796
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T LHDV +EEK ++L HSEKLA+AYG+L+ G PIR+ KNLRVC DCH+A +I
Sbjct: 797 PETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYI 856
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKIV II+RD++RFHHF GSCSCG YW
Sbjct: 857 SKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/591 (24%), Positives = 259/591 (43%), Gaps = 93/591 (15%)
Query: 87 MPRRSSVSYNAM----ISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR----NKS 138
+P S VS ++ ++ YL G A V +++ V WN+++ +++ +++
Sbjct: 74 LPSHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRA 133
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ + + K D + L + R + + E N N L+A
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAM 193
Query: 195 YVQNGRIEEACMLFES---KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV------- 244
Y + G +E+A ++F+ K +V+SWNS++ VK A +F M +
Sbjct: 194 YSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKAT 253
Query: 245 ---RDEVSWNTMITGYAQNNYLAEAQRLFEEA----PVKDVFTWTAMVSGYVQNGKVDEA 297
D +S ++ A L + + + A D F A++ Y + G +++A
Sbjct: 254 NERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDA 313
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----VASWNTMITGYAQS 353
+F+ M K+ VSWNAM+ GY Q+ A ELFE M +N V +W+ +I GY
Sbjct: 314 VKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGY--- 370
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
AQ G S+++L F +M G N S+L
Sbjct: 371 ----------------------------AQRGCSQEALDAFQQMILDGSEPNSVTIISLL 402
Query: 414 STCANLASLELGKQLHGQLVKVGF------------EAGCFVGNALLVMYCKCGSVEEAY 461
S CA+L +L G ++H +K V NAL+ MY KC S + A
Sbjct: 403 SACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAAR 462
Query: 462 HAFEEIV--DKDVISWNTMIAGYARHGFGKDALMLFESM--KTVGIKPDDITMVGILSAC 517
F+ I +++V++W MI GYA++G DAL +F M K + P+ T+ IL AC
Sbjct: 463 SIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMAC 522
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYT-CMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+H + G + + R + P+ C++D+ + G +D A+N+ +MP + +
Sbjct: 523 AHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEV 581
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLSNLYAAS 622
+W +++ ++G+ ++A ++ +M+ P++ VL LYA S
Sbjct: 582 SWTSMMSGYGMHGR---GKEALDIFDKMQKAGFVPDDISFLVL---LYACS 626
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 209/502 (41%), Gaps = 126/502 (25%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP---------RRSSV----------------- 93
D+ WN + H++ +AL +F+ M RS +
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALP 276
Query: 94 ------SY-------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV 134
SY NA+I Y G ++ A +VF+ M +D+VSWN M++GY
Sbjct: 277 QIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYT 336
Query: 135 RNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEI 186
++ + AA LFE M K DV++W+ +++GYAQ G + A F +M+ E N +
Sbjct: 337 QSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSV 396
Query: 187 SWNGLLAAYVQNGRIEEA----------CML------FESKANWEVVSWNSLMGGFVKQK 230
+ LL+A G + + C+L +++ +N+L+ + K +
Sbjct: 397 TIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCR 456
Query: 231 RLGDAKWIFDRMPVRDE--VSWNTMITGYAQNNYLAEAQRLFEEAPVKD----------- 277
A+ IFD +P R+ V+W MI GYAQ +A ++F E K
Sbjct: 457 SFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTIS 516
Query: 278 --------------------------------VFTWTAMVSGYVQNGKVDEARMIFDAMP 305
F ++ Y + G VD AR +FD+MP
Sbjct: 517 CILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP 576
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARN 361
++N VSW +M++GY R A ++F+ M + S+ ++ + SG + N
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLN 636
Query: 362 LFDRMPQ-HDCIS----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
FD M + +D ++ +A +I A+ G + + + EM + + ++LS C
Sbjct: 637 YFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAV---IWVALLSAC 693
Query: 417 ANLASLELGKQLHGQLVKVGFE 438
+++EL + +LV + E
Sbjct: 694 RVHSNVELAEYALNKLVNMKAE 715
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/715 (35%), Positives = 389/715 (54%), Gaps = 82/715 (11%)
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
N+ +P + +N ++ YA + ARR+FDR+ + N SWN LL AY + G I E
Sbjct: 31 NIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISE 90
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD----------------- 246
FE + + V+WN L+ G+ +G A ++ M +RD
Sbjct: 91 MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTLMTMLKLS 149
Query: 247 ----EVSWNTMITG--------------------YAQNNYLAEAQRLFEEAPVKDVFTWT 282
VS I G YA +++A+++F ++ +
Sbjct: 150 SSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYN 209
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------- 335
+++ G + G +++A +F M EK++VSW AMI G Q A E F M
Sbjct: 210 SLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 336 ----------TCKNVASWN----------------------TMITGYAQSGEITHARNLF 363
C + + N +I Y + + +A+ +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
DRM Q + +SW A++ GY Q+G +E+++++F++M+R G + +S CAN++SLE
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G Q HG+ + G V N+L+ +Y KCG ++++ F E+ +D +SW M++ YA
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+ G + + LF+ M G+KPD +T+ G++SACS GLVEKG YF M +YG++P+
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSI 508
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
HY+CM+DL R+GRL+EA + MPF PDA W LL ACR G E+ + AAE + E
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDT 663
++P + Y LLS++YA+ G+W V+++R MR++ VKK G SW++ + K+H+FS D
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDE 628
Query: 664 LHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI 723
P D+IYA LEEL K+ +G+ T V HDV E K ML YHSE+LA+A+G++ +
Sbjct: 629 SSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFV 688
Query: 724 PAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P+G+PIRV KNLRVC DCHNA KHIS + GR I++RD RFH F G+CSCGD+W
Sbjct: 689 PSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/581 (24%), Positives = 239/581 (41%), Gaps = 131/581 (22%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A VF+ +P+ + S+N ++ Y G + F+++P RD V+WNV+I GY + +
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 140 SAARNLFEMMPKRDV------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----N 189
AA + M RD V+ TML + NG+ ++I ++++ S+ +
Sbjct: 120 GAAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS 178
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
LL Y G I +A +F + V +NSLMGG + + DA +F M +D VS
Sbjct: 179 PLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVS 237
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKD-------------------------------- 277
W MI G AQN EA F E V+
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 278 -------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
++ +A++ Y + + A+ +FD M +KN VSW AM+ GY QT R + A +
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 331 LFEAM-----------------TCKNVASW----------------------NTMITGYA 351
+F M C NV+S N+++T Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G+I + LF+ M D +SW A+++ YAQ G + ++++LF +M ++G + + T
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
V+S C+ +E G++ +M + G V H
Sbjct: 478 VISACSRAGLVEKGQRY------------------FKLMTSEYGIVPSIGH--------- 510
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG---TE 528
++ MI ++R G ++A+ M PD I +LSAC + G +E G E
Sbjct: 511 ---YSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
++ + YT + + G+ D L + M
Sbjct: 565 SLIELDPHH-----PAGYTLLSSIYASKGKWDSVAQLRRGM 600
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 196/487 (40%), Gaps = 106/487 (21%)
Query: 37 SKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS---- 92
SK L + S P D D WNV I + +G +A+ +N+M R S
Sbjct: 83 SKAGLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138
Query: 93 ----------------VSYNAMISG---------YLLNGQ-----------LDPARQVFD 116
VS I G YLL G + A++VF
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+ R+ V +N ++ G + + A LF M K D VSW M+ G AQNG A A
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 177 FDRM----LEKNEISWNGLLAAYVQNGRIEE-----ACMLFESKANWE--VVSWNSLMGG 225
F M L+ ++ + +L A G I E AC++ + N++ + ++L+
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII---RTNFQDHIYVGSALIDM 314
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTW 281
+ K K L AK +FDRM ++ VSW M+ GY Q EA ++F D +T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 282 TAMVSGYVQNGKVDE-----ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+S ++E + I + TVS N+++ Y + +D + LF M
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS-NSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLR 392
++ SW M++ YAQ G LFD+M QH D ++ +I+ +++G E R
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 393 LFIEM-KRYG-------------------------ERLNRSPF-------TSVLSTCANL 419
F M YG +N PF T++LS C N
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNK 553
Query: 420 ASLELGK 426
+LE+GK
Sbjct: 554 GNLEIGK 560
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 10/190 (5%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
K +HG +++ F+ N ++ Y S A F+ I ++ SWN ++ Y++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G + FE + D +T ++ S +GLV + + +M RD+
Sbjct: 86 GLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 546 YTCMVDLLGRAGRLDEAQNL---MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
M+ L G + + + + + FE LL +Y A +V +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL---YMYANVGCISDAKKVFY 198
Query: 603 EMEPENAGMY 612
++ N MY
Sbjct: 199 GLDDRNTVMY 208
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/796 (34%), Positives = 424/796 (53%), Gaps = 99/796 (12%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVS-YNAMISGYLLNGQLDPARQVFDQMPQRDLV-- 124
+++++ + C V S ++ YN I + G L A ++ +Q P+ DL
Sbjct: 43 VSSNLYHSCATIGTSVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELR 102
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRM 180
++ ++ KS+ R + ++ DV V + ++ Y G RRIFD++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+ WN L+ Y + G E+ LF+ + +R+ A+ +FD
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI-------------RRVESARKLFD 209
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSG--------- 287
+ RD +SWN+MI+GY N + LFE+ + D+ T ++V+G
Sbjct: 210 ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLL 269
Query: 288 --------------------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
Y ++G ++ A +F+ M E++ VSW +MIAGY +
Sbjct: 270 GRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAR 329
Query: 322 TKRMDMARELFEAM-------------------TC-------KNVASW------------ 343
DM+ LF M C K+V ++
Sbjct: 330 EGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFV 389
Query: 344 -NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N ++ YA+ G + A ++F M D +SW +I GY+++ ++L LF+EM+ Y
Sbjct: 390 SNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNS 448
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ N +L CA+LA+LE G+++HG +++ GF V NAL+ MY KCG++ A
Sbjct: 449 KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 508
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ I +KD++SW MIAGY HG+G +A+ F M+ GI+PD+++ + IL ACSH+GL
Sbjct: 509 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 568
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+++G +F M + + P S+HY C+VDLL RAG L +A +K MP EPDA WGALL
Sbjct: 569 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
CR+Y +LAEK AE +FE+EPEN G YVLL+N+YA + +W +V K+R ++ RG++K
Sbjct: 629 CGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRK 688
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G SW+E++ KVH F GD+ HP ++I L++ ++K++G + L + E
Sbjct: 689 NPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTE 748
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE L HSEK+A+A+GILS+P G+ +RV KNLRVC DCH K +SK+V R IILRD+N
Sbjct: 749 KEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSN 808
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF GSCSC +W
Sbjct: 809 RFHHFKDGSCSCRGHW 824
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/726 (36%), Positives = 408/726 (56%), Gaps = 36/726 (4%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKS 138
VF+ MP R++VS+ +I GY + + A ++F ++ + + + ++ V +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 139 LSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
R + + K + ++ Y+ +G AR +FD + K+ +SW G++A+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
Y +N EA F S+ N+ V + LG V + +
Sbjct: 122 YAENDCFSEALEFF-SQMRVAGFKPNNFTFAGVLKACLG-----LQNFDAGKTVHCSVLK 175
Query: 255 TGYAQNNYLA--------------EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
T Y ++ Y+ +A R F + P DV W+ M+S + Q+G+ ++A I
Sbjct: 176 TNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEI 235
Query: 301 FDAMPEK----NTVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQ 352
F M N ++++++ + +D+++ + +A +V N ++ YA+
Sbjct: 236 FCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAK 295
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G I + LF+ + + +SW II Y Q G E +L LF M RY + ++S+
Sbjct: 296 CGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSI 355
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L CA LA+LELG Q+H K + VGNAL+ MY KCGS+++A F+ + +D
Sbjct: 356 LRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDK 415
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWN +I GY+ HG G +A+ +F MK KPD++T VG+LSACS+TG +++G +YF S
Sbjct: 416 VSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTS 475
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M +DYG+ P +HYTCMV L+GR+G LD+A ++++PFEP W ALLGAC ++ E
Sbjct: 476 MKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVE 535
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
L +A+ + E+EP + +VLLSN+YA + RWG+V+ VR M+ +GVKK G SW+E Q
Sbjct: 536 LGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQ 595
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
VH F+V DT H + I LE L K ++ G+ VL DV ++EKE +L HSE
Sbjct: 596 GNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSE 655
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
+LA+A+G++ +PAG PIR++KNLR+C DCH+ IK ISKIVGR II+RD NRFHHF GSC
Sbjct: 656 RLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSC 715
Query: 773 SCGDYW 778
SC DYW
Sbjct: 716 SCADYW 721
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 51/287 (17%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV----SW 126
+ R G D A F MP+ + ++ MIS + +GQ + A ++F QM + ++ ++
Sbjct: 192 YTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTF 251
Query: 127 NVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
+ ++ +SL ++ + K DV N +++ YA+ G + + +F+ + +
Sbjct: 252 SSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSD 311
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSW------------------- 219
+N++SWN ++ +YVQ G E A LF + ++V V++
Sbjct: 312 RNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQV 371
Query: 220 ----------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
N+L+ + K + DA+++FD + +RD+VSWN +I GY+ +
Sbjct: 372 HCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLG 431
Query: 264 AEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
EA ++F +E K D T+ ++S G++DE + F +M +
Sbjct: 432 VEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 155/371 (41%), Gaps = 65/371 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPAR--- 112
D+ W I ++ N C AL F+ M + ++ ++ ++ L D +
Sbjct: 111 DMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVH 170
Query: 113 -QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
V +RDL ++ Y R A F MPK DV+ W+ M+S +AQ+G ++
Sbjct: 171 CSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSE 230
Query: 172 AARRIFDRM---------------------------------------LEKNEISWNGLL 192
A IF +M L + N L+
Sbjct: 231 KALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALM 290
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD---AKWIFDRM----PVR 245
A Y + G IE++ LFE+ ++ VSWN+++ +V+ LGD A +F M
Sbjct: 291 ACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQ---LGDGERALSLFSNMLRYQVQA 347
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
EV++++++ A L ++ + +DV A++ Y + G + +AR +F
Sbjct: 348 TEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMF 407
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---TCK-NVASWNTMITGYAQSGEIT 357
D + ++ VSWNA+I GY A ++F M CK + ++ +++ + +G +
Sbjct: 408 DMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLD 467
Query: 358 HARNLFDRMPQ 368
+ F M Q
Sbjct: 468 EGKQYFTSMKQ 478
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 26 LQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFN 85
LQ+ A+ KT+ H K D+ N + + + GC + ++ +F
Sbjct: 255 LQASADIESLDLSKTIHGH-------ALKAGLSTDVFVSNALMACYAKCGCIEQSMELFE 307
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNL 145
++ R+ VS+N +I Y+ G + A +F M + + + V S +R + AA L
Sbjct: 308 ALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALEL 367
Query: 146 --------FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
+ + +DV N ++ YA+ G AR +FD + ++++SWN ++ Y
Sbjct: 368 GLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSM 427
Query: 198 NGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-------PVRD 246
+G EA +F E+K + +++ ++ RL + K F M P +
Sbjct: 428 HGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCME 487
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARM 299
+ + G + N L +A + E+ P + V W A++ V + V+ R+
Sbjct: 488 HYTCMVWLMGRSGN--LDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRI 539
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/743 (34%), Positives = 411/743 (55%), Gaps = 64/743 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK-RDV 154
N++IS G +D A +FDQM +RD +SWN + + Y +N + + +F +M + D
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 155 VSWNTMLSGYAQNGYAD-----------AARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
V+ T+ + + G+ D + FD ++ N LL Y GR E
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV----CVCNTLLRMYAGAGRSVE 314
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE----VSWNTMITGYAQ 259
A ++F+ +++SWNSLM FV R DA + M + V++ + +
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 260 NNYLAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
++ + + L V +F A+VS Y + G++ E+R + MP ++ V+WNA+
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVAS--------------------------------- 342
I GY + + D A F+ M + V+S
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 343 -------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N++IT YA+ G+++ +++LF+ + + I+W A++A A G+ E+ L+L
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 554
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+M+ +G L++ F+ LS A LA LE G+QLHG VK+GFE F+ NA MY KCG
Sbjct: 555 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 614
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ E V++ + SWN +I+ RHG+ ++ F M +GIKP +T V +L+
Sbjct: 615 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 674
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH GLV+KG Y+ + RD+G+ P +H C++DLLGR+GRL EA+ + MP +P+
Sbjct: 675 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPND 734
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W +LL +C+++G + KAAE + ++EPE+ +YVL SN++A +GRW DV VR +M
Sbjct: 735 LVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQM 794
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+ +KK SW+++++KV +F +GD HP+ IYA LE+++ +K+ G+V T L
Sbjct: 795 GFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQAL 854
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
D EE+KEH L HSE+LA+AY ++S P G +R+ KNLR+C DCH+ K +S+++GR
Sbjct: 855 QDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRR 914
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I+LRD RFHHF G CSC DYW
Sbjct: 915 IVLRDQYRFHHFERGLCSCKDYW 937
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 217/483 (44%), Gaps = 85/483 (17%)
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------------- 270
+ K R+ A+ +FD MPVR+EVSWNTM++G + E F
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 271 -------------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ + DV+ TA++ Y G V +R +F+ MP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV------------------------- 340
++N VSW +++ GY + ++++ M + V
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 341 --------------ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
A N++I+ G + +A +FD+M + D ISW +I A YAQ+G+
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E+S R+F M+R+ + +N + +++LS ++ + G+ +HG +VK+GF++ V N
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
LL MY G EA F+++ KD+ISWN+++A + G DAL L SM + G +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T L+AC EKG + + G+ N +V + G+ G + E++ ++
Sbjct: 362 YVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN-AGMYVLLSNLYAASGRW 625
MP D W AL+G Y + E +KA M E + Y+ + ++ +A
Sbjct: 421 LQMP-RRDVVAWNALIGG---YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 476
Query: 626 GDV 628
GD+
Sbjct: 477 GDL 479
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY K G V+ A H F+ + ++ +SWNTM++G R G + + F M +GIKP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ +++AC +G + + + G++ + T ++ L G G + ++ + + M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 570 PFEPDAATWGALL 582
P + + +W +L+
Sbjct: 121 P-DRNVVSWTSLM 132
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 140/370 (37%), Gaps = 62/370 (16%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ + + G + V MPRR V++NA+I GY + D A F M +
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 125 S----------------------------------------WNVMISGYVRNKSLSAARN 144
S N +I+ Y + LS++++
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGR 200
LF + R++++WN ML+ A +G+ + ++ +M + ++ S++ L+A +
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 201 IEEACML--FESKANWEVVS--WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+EE L K +E S +N+ + K +G+ + R SWN +I+
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 257 YAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP-----EK 307
++ Y E F E + T+ ++++ G VD+ +D + E
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHAR----NL 362
+I ++ R+ A M K N W +++ G + R NL
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 760
Query: 363 FDRMPQHDCI 372
P+ D +
Sbjct: 761 SKLEPEDDSV 770
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/660 (38%), Positives = 385/660 (58%), Gaps = 19/660 (2%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
SL A +F+ +P+ ++ +WNT++ +A + +F +ML +++ N +V
Sbjct: 79 SLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVI 138
Query: 198 NGRIEEACML---------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
E + +L ++ ++ NSL+ + L A +F ++ +D V
Sbjct: 139 KAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIV 198
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
SWN+MI+G+ Q EA +LF+ +++ T ++S + ++ R D +
Sbjct: 199 SWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYI 258
Query: 305 P----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
+ N + NAM+ YV+ ++ AR LF+ M K++ SW TMI GYA+ G+ AR
Sbjct: 259 ERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAAR 318
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANL 419
+FD MP+ D +W A+I+ Y Q+G +++L +F E++ + N S L+ CA L
Sbjct: 319 RVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQL 378
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+++LG +H + K G + + +L+ MY KCG +E+A F + +DV W+ MI
Sbjct: 379 GAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMI 438
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
AG A HG G+ A+ LF M+ +KP+ +T +L ACSH+GLV++G +F M YGV
Sbjct: 439 AGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGV 498
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P SKHY CMVD+LGRAG L+EA L++ MP P A+ WGALLGACR+YG ELAE A
Sbjct: 499 VPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACS 558
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E + N G YVLLSN+YA +G+W VS++R M+ G++K G S +EV +H F
Sbjct: 559 RLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFL 618
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE-EKEHMLRYHSEKLAVAY 718
VGD HP IY+ L+E+ ++K G+V +L V EE KEH L HSEKLA+AY
Sbjct: 619 VGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAY 678
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G++ + +PIR++KNLRVC DCH+ K ISK+ R I+LRD RFHHFSGG+CSC DYW
Sbjct: 679 GLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 182/364 (50%), Gaps = 18/364 (4%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
DL N +I Y L +A +F + ++D+VSWN+M+SG+ Q G + A ++F RM
Sbjct: 165 DLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMK 224
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEE---ACMLFESKA-NWEVVSWNSLMGGFVKQKRLG 233
N ++ G+L+A + +E AC E + ++ N+++ +VK L
Sbjct: 225 MENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLE 284
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
DA+ +FD+M +D VSW TMI GYA+ A+R+F+ P +D+ W A++S Y QNGK
Sbjct: 285 DARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGK 344
Query: 294 VDEARMIFDAM-----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWN 344
EA IF + + N V+ + +A Q MD+ + + + N
Sbjct: 345 PKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITT 404
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++I Y++ G + A +F + + D W+A+IAG A G+ ++ LF +M+ +
Sbjct: 405 SLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKP 464
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N FT++L C++ ++ G+ Q+ V G G ++ + + G +EEA
Sbjct: 465 NAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVEL 524
Query: 464 FEEI 467
E++
Sbjct: 525 IEKM 528
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 164/364 (45%), Gaps = 58/364 (15%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQR------- 121
G DSA VF+ + + VS+N+MISG++ G + A Q+F +M P R
Sbjct: 180 GDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVL 239
Query: 122 --------------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+L+ N M+ YV+ SL AR LF+ M ++D+V
Sbjct: 240 SACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIV 299
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANW 214
SW TM+ GYA+ G DAARR+FD M ++ +WN L+++Y QNG+ +EA +F E + N
Sbjct: 300 SWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNK 359
Query: 215 EV----VSWNSLMGGFVKQKRLGDAKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEA 266
V+ S + + + WI + ++ T +I Y++ +L +A
Sbjct: 360 NTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKA 419
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQT 322
+F +DVF W+AM++G +G A +F M E N V++ ++ +
Sbjct: 420 LEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHS 479
Query: 323 KRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAA 376
+D R F M + M+ ++G + A L ++MP S W A
Sbjct: 480 GLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGA 539
Query: 377 IIAG 380
++
Sbjct: 540 LLGA 543
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/624 (41%), Positives = 371/624 (59%), Gaps = 63/624 (10%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNNYLAEAQRL 269
V SWNS++ F + A + F M P R ++ I + L +++
Sbjct: 51 VYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRS--TFPCTIKSCSSLYDLCAGKQI 108
Query: 270 FEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
++A V D+F +A++ Y + G +++AR +FD +PE+N VSW +MI+GYVQ +R
Sbjct: 109 HQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERA 168
Query: 326 DMARELFEAM----------------------------TCKNV----------------- 340
A LF+ C V
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG 228
Query: 341 -----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
A NT++ YA+ GEI+ +R +FD M + D SW ++IA YAQ+G S ++ LF
Sbjct: 229 FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288
Query: 396 EMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+M + GE R N ++VL CA+ +L++GK +H Q+VK+ E VG +++ MYCKC
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC 348
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G VE A AF+ + K+V SW M+AGY HG GK+A+ +F M GIKP+ IT V +L
Sbjct: 349 GRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVL 408
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ACSH GL+++G +F M ++ V P +HY+CMVDLLGRAG L EA L++ M +PD
Sbjct: 409 AACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPD 468
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
WG+LLGACR++ EL E +A +F+++P N G YVLLSN+YA +GRW DV ++R+
Sbjct: 469 FIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRIL 528
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
M++ G+ K GYS +E + +VH F VGD HP+ ++IY YL+EL KL++ G++ + V
Sbjct: 529 MKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSV 588
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
L+DV EEK +LR HSEKLAVA+GI++ G I+++KNLR+C DCH AIK ISKIV R
Sbjct: 589 LYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNR 648
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
I++RD+ RFHHF G CSCGDYW
Sbjct: 649 EIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 237/540 (43%), Gaps = 91/540 (16%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSM------PRRSS--VSYNAMISGYLLNGQLDPAR 112
+ WN I R+G AL+ F+SM P RS+ + + S Y L +
Sbjct: 51 VYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQ 110
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
Q F D+ + +I Y + L+ AR LF+ +P+R+VVSW +M+SGY QN A
Sbjct: 111 QAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERARE 170
Query: 173 ARRIFDRMLEKNEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFV 227
A +F L +E ++ ++ V G + AC K+ E V ++ GF
Sbjct: 171 AVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFE 230
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
+G NT++ YA+ ++ ++++F+ DV +W ++++
Sbjct: 231 GCLAVG-----------------NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAV 273
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMI----------AGYVQTKRMDMARELFEAMTC 337
Y QNG EA +F M ++ V +NA+ +G +Q + + ++ +
Sbjct: 274 YAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKC-IHDQVVKMELE 332
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
N+ +++ Y + G + AR FDR+ + + SW ++AGY G+ ++++++F EM
Sbjct: 333 DNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM 392
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
R G + N F SVL+ C+ H L+K
Sbjct: 393 IRCGIKPNYITFVSVLAACS-----------HAGLLK----------------------- 418
Query: 458 EEAYHAFEEI-----VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
E +H F ++ V+ + ++ M+ R G+ K+A L + MK +KPD I
Sbjct: 419 -EGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMK---VKPDFIVWGS 474
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQN---LMKN 568
+L AC VE G S + + + P N +Y + ++ AGR D+ + LMKN
Sbjct: 475 LLGACRIHKNVELGE---ISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKN 531
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 360 RNLFDR-MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
R++F + + + SW +IIA +A+SG S +L F M++ NRS F + +C++
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
L L GKQ+H Q G+ + FV +AL+ MY KCG + +A F+EI +++V+SW +M
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 479 IAGYARHGFGKDALMLFESMKTVG-----------IKPDDITMVGILSACSHTGLVEKGT 527
I+GY ++ ++A+ LF+ V + D + + ++SAC+ V+ T
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV-CVKSVT 217
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
E + + G ++D + G + ++ + M E D +W +L+ +
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLIA---V 273
Query: 588 YGKTELAEKAAEVIFEMEPENAGMY--VLLSNLYAASGRWG 626
Y + L+ +A + +M Y V LS + A G
Sbjct: 274 YAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSG 314
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 181/448 (40%), Gaps = 74/448 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
DI + I + + G + A +F+ +P R+ VS+ +MISGY+ N + A +F +
Sbjct: 120 DIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFL 179
Query: 119 --------------PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD----VVSWNTM 160
D V +IS R S + + K+ + NT+
Sbjct: 180 LVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTL 239
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-----KANWE 215
+ YA+ G +R++FD M E + SWN L+A Y QNG EA LF + +
Sbjct: 240 MDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYN 299
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFD---RMPVRDEVSWNTMITG-YAQNNYLAEAQRLFE 271
V+ ++++ L K I D +M + D + T I Y + + A++ F+
Sbjct: 300 AVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFD 359
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDM 327
K+V +WT MV+GY +G EA +F M + N +++ +++A +
Sbjct: 360 RLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKE 419
Query: 328 ARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG- 380
F M C+ + ++ M+ ++G + A L M + D I W +++
Sbjct: 420 GWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGAC 479
Query: 381 ---------------------------------YAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA +G +D R+ I MK +G L ++
Sbjct: 480 RIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHG--LLKT 537
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKV 435
P S++ + +G + H Q K+
Sbjct: 538 PGYSIVEHKGRVHVFLVGDKEHPQHEKI 565
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/747 (35%), Positives = 407/747 (54%), Gaps = 93/747 (12%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
DL S + + +++ R LF + K D+ +N ++ G++ NG ++ ++ +
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 182 EKNEISWNGLLAAYVQNG--RIEE--ACMLFESKANWEVVSWNSLMGG-----FVKQKRL 232
+ + + A+ + R+E+ +L + + + V+ N +G + K R
Sbjct: 105 KXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-------------APV---- 275
A+ +FD MP RD V WNTMI+G+++N+Y ++ R+F + A V
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224
Query: 276 ----------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
DV+ T ++S Y + GK + R++FD + + + +S+N
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYN 284
Query: 314 AMIAGYVQTKRMDMARELF-EAMTCKNVASWNTMI------------------------- 347
AMI+GY + A LF E + + +T++
Sbjct: 285 AMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKI 344
Query: 348 -------------TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
T Y + E+ AR LFD P+ SW A+I+GY Q+G ++ ++ LF
Sbjct: 345 GIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLF 404
Query: 395 IEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
EM +L+ +P T S+LS CA L +L +GK +HG + E+ +V AL+ MY
Sbjct: 405 QEMM---PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYA 461
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCGS+ EA F+ +VDK+V++WN MI GY HG GK+AL LF M GI P +T +
Sbjct: 462 KCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLS 521
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
IL ACSH+GLV +G E F+SM +YG P S+HY CMVD+LGRAG+L A ++ MP E
Sbjct: 522 ILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLE 581
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
P A WGALLGAC ++ TE+A A++ +F+++PEN G YVLLSN+Y+ + + VR
Sbjct: 582 PGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVR 641
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST- 691
++ R + K G + +E+ ++ + F+ GD HP+ I+ LE+L K+++ G+ T
Sbjct: 642 QVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETV 701
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
LHDV +EEKE M+ HSEKLA+A+G++S G IR++KNLRVC DCH A K ISKI
Sbjct: 702 TTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKI 761
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+I++RD NRFHHF G CSCGDYW
Sbjct: 762 TERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 26/384 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVR 135
A VF+ MP R +V +N MISG+ N + + +VF M D + +++
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226
Query: 136 NKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
+ + + K+ DV ++S Y++ G + R +FD++ + + IS+N +
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 192 LAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMG--------GFVKQKRLGDAKWIFDRM 242
++ Y N E A LF E A+ + V+ ++L+G ++ RL + +
Sbjct: 287 ISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGI 346
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF- 301
++ VS + T Y + N + A++LF+E+P K + +W AM+SGY QNG D A +F
Sbjct: 347 ILQPSVS-TALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 302 DAMPE--KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGE 355
+ MP+ N V+ ++++ Q + + + + + + NV ++ YA+ G
Sbjct: 406 EMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGS 465
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I AR LFD M + ++W A+I GY G+ +++L+LF EM + G F S+L
Sbjct: 466 IVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYA 525
Query: 416 CANLASLELGKQL-HGQLVKVGFE 438
C++ + G ++ H GF+
Sbjct: 526 CSHSGLVSEGNEIFHSMANNYGFQ 549
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 52/258 (20%)
Query: 69 TTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ-MPQ------- 120
T + R A +F+ P +S S+NAMISGY NG D A +F + MPQ
Sbjct: 358 TVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVT 417
Query: 121 -------------------------RDLVSWNVMISG-----YVRNKSLSAARNLFEMMP 150
+ + NV +S Y + S+ AR LF++M
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACM 206
++VV+WN M++GY +G+ A ++F ML+ +++ +L A +G + E
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537
Query: 207 LFESKAN---WEVVS--WNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITG--YA 258
+F S AN ++ +S + ++ + +L +A +RMP+ W ++
Sbjct: 538 IFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597
Query: 259 QNNYLAE--AQRLFEEAP 274
+N +A ++RLF+ P
Sbjct: 598 KNTEMANVASKRLFQLDP 615
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 9/197 (4%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F ++L+ L+ L Q+ QL+ G L + G+V F ++
Sbjct: 17 FLTLLNNATTLSQL---LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVS 73
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGT 527
D+ +N +I G++ +G K ++ L+ + K ++PD+ T +SA S E+
Sbjct: 74 KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLE-DERVG 132
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
++ + GV N + +VDL + R + A+ + MP E D W ++
Sbjct: 133 VLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISG--- 188
Query: 588 YGKTELAEKAAEVIFEM 604
+ + E + V +M
Sbjct: 189 FSRNSYFEDSIRVFVDM 205
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/679 (39%), Positives = 379/679 (55%), Gaps = 40/679 (5%)
Query: 117 QMPQRDLVS-------WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
Q+P D S WN +I+ Y + A N++ + K D N M +
Sbjct: 76 QIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKAC- 134
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
++SW L G+ E + + + +V N+LM + +
Sbjct: 135 --------------GQVSWTQL-------GK-EIHGFVLKKGLDRDVFVGNALMLMYGEC 172
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF-TWTAMVS-- 286
+ A+ +FD+M RD VSW+TMI ++N A L E V + AMVS
Sbjct: 173 ACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMV 232
Query: 287 ------GYVQNGKVDEARMIFDAMPEKNTV-SWNAMIAGYVQTKRMDMARELFEAMTCKN 339
++ GK A +I ++ E V + A++ Y + + +AR+LF +T K
Sbjct: 233 NLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKT 292
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
V SW MI G +S + AR LFD D + W A+++ YAQ+ + + LF +M+
Sbjct: 293 VVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 352
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G R + S+LS CA +L+LGK +H + K E C + AL+ MY KCG +
Sbjct: 353 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 412
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F E + +D+ WN +I G+A HG+G++AL +F M+ G+KP+DIT +G+L ACSH
Sbjct: 413 AGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 472
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
GLV +G + F M +G++P +HY CMVDLLGRAG LDEA ++K+MP +P+ WG
Sbjct: 473 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 532
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
AL+ ACRL+ +L E AA + E+EPEN G VL+SN+YAA+ RW D + VR M+ G
Sbjct: 533 ALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVG 592
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
+KK G+S +EV VH F +GD HP+ RI L E+ KL + G+V T VL ++
Sbjct: 593 MKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 652
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
EEEKE L YHSEKLA+A+G++S PIR++KNLRVC DCH A K +SKI GR+II+R
Sbjct: 653 EEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVR 712
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D NRFHHF G CSCGDYW
Sbjct: 713 DRNRFHHFREGYCSCGDYW 731
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 215/481 (44%), Gaps = 72/481 (14%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS----------------SVSYNAM 98
P+G QWN IT++ + +AL+V+ + + VS+ +
Sbjct: 83 PSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQL 142
Query: 99 ---ISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
I G++L LD RD+ N ++ Y + AR +F+ M +RDVV
Sbjct: 143 GKEIHGFVLKKGLD-----------RDVFVGNALMLMYGECACVEYARLVFDKMMERDVV 191
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGL--LAAYVQNGRIEEACMLF- 208
SW+TM+ ++N D A + M + +E++ + L A N R+ +A +
Sbjct: 192 SWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYV 251
Query: 209 ---ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+ + V + +L+ + K LG A+ +F+ + + VSW MI G ++N L E
Sbjct: 252 IRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEE 311
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGY 319
A+ LF+ +DV WTAM+S Y Q +D+A +FD M P K T+ ++++
Sbjct: 312 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIV--SLLSLC 369
Query: 320 VQTKRMDMA--------RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+D+ +E E N A ++ YA+ G+I A LF D
Sbjct: 370 AVAGALDLGKWVHSYIDKERVEVDCILNTA----LVDMYAKCGDINAAGRLFIEAISRDI 425
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
W AII G+A GY E++L +F EM+R G + N F +L C++ + GK+L +
Sbjct: 426 CMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEK 485
Query: 432 LVKV-GF-----EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYAR 484
+V G GC V + + G ++EA+ + + + + I W ++A
Sbjct: 486 MVHTFGLVPQIEHYGCMVD-----LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 540
Query: 485 H 485
H
Sbjct: 541 H 541
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 171/404 (42%), Gaps = 50/404 (12%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSV-SYNAMISGYLLNGQLDPARQVFDQMPQRDLVS 125
A T +MR G A + NS V + A++ Y G L ARQ+F+ + Q+ +VS
Sbjct: 236 ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 295
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----L 181
W MI+G +R+ L AR LF+ RDV+ W MLS YAQ D A +FD+M +
Sbjct: 296 WTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 355
Query: 182 EKNEISWNGLLA---------------AYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
+++ LL+ +Y+ R+E C+L +L+ +
Sbjct: 356 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN-----------TALVDMY 404
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWT 282
K + A +F RD WN +ITG+A + Y EA +F E + V T+
Sbjct: 405 AKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFI 464
Query: 283 AMVSGYVQNGKVDEARMIFDAMPE-----KNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
++ G V E + +F+ M + M+ + +D A E+ ++M
Sbjct: 465 GLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPI 524
Query: 338 K-NVASWNTMITGY-----AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
K N W ++ Q GE+ A L + P+ +C + YA + D+
Sbjct: 525 KPNTIVWGALVAACRLHKNPQLGELA-ATQLLEIEPE-NCGYNVLMSNIYAAANRWSDAA 582
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+ MK G + + P SV+ + +G Q H Q+ ++
Sbjct: 583 GVRKTMKTVG--MKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRI 624
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/737 (36%), Positives = 404/737 (54%), Gaps = 89/737 (12%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI-- 186
+++ Y +S +R F+ +P++DV +WN+M+S Y NG+ A F ++L +EI
Sbjct: 157 LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 216
Query: 187 ---SWNGLLAA--YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
++ +L A + +GR + C F+ W V SL+ + + G A+ +FD
Sbjct: 217 DFYTFPPVLKACGTLVDGR-KIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDD 275
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK------------------------- 276
MP RD SWN MI+G QN A+A + +E ++
Sbjct: 276 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTA 335
Query: 277 --------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
D+F A+++ Y + G +++AR F M + VSWN++IA Y Q
Sbjct: 336 MLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQN 395
Query: 323 KRMDMARELFEAMT-----------------------CKN-----------------VAS 342
A F M CKN V
Sbjct: 396 DDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVI 455
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N ++ YA+ G + A +F+ +P D ISW +I GYAQ+G + +++ ++ M+ E
Sbjct: 456 GNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKE 515
Query: 403 RL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ N+ + S+L A++ +L+ G ++HG+++K FV L+ +Y KCG + +A
Sbjct: 516 IIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 575
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F ++ + ++WN +I+ + HG + L LF M G+KPD +T V +LSACSH+G
Sbjct: 576 SLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSG 635
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
VE+G ++ + + ++YG+ P+ KHY CMVDLLGRAG L+ A + +K+MP +PDA+ WGAL
Sbjct: 636 FVEEG-KWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGAL 694
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++G EL + A++ +FE++ +N G YVLLSN+YA G+W V KVR R+RG+K
Sbjct: 695 LGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK 754
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G+S +EV KV F G+ HP+ IY L L K+K G++ VL DV E+
Sbjct: 755 KTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEED 814
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EKEH+L HSE+LA+A+GI+S P PIR+ KNLRVC DCHNA K IS+I R I++RD+
Sbjct: 815 EKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDS 874
Query: 762 NRFHHFSGGSCSCGDYW 778
NRFHHF G CSCGDYW
Sbjct: 875 NRFHHFKDGICSCGDYW 891
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 186/421 (44%), Gaps = 47/421 (11%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEA-PVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+E+ +N + + + L A V+ +F T +V+ Y G V +R FD +
Sbjct: 118 EEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQI 177
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------------TCKNVA----- 341
P+K+ +WN+MI+ YV A F + C +
Sbjct: 178 PQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKI 237
Query: 342 ---------SWNTMITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
WN + Y++ G AR+LFD MP D SW A+I+G Q+G +
Sbjct: 238 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 297
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+L + EM+ G ++N S+L C L + +H ++K G E FV NAL
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNAL 357
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY K G++E+A AF+++ DV+SWN++IA Y ++ A F M+ G +PD
Sbjct: 358 INMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDL 417
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T+V + S + + + + R ++ + +VD+ + G LD A + +
Sbjct: 418 LTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFE 477
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP-----ENAGMYVLLSNLYAAS 622
+P + D +W L+ Y + LA +A EV ME N G +V + YA
Sbjct: 478 IIPVK-DVISWNTLITG---YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533
Query: 623 G 623
G
Sbjct: 534 G 534
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 129/571 (22%), Positives = 231/571 (40%), Gaps = 156/571 (27%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-------------------------- 93
D+ WN I+ ++ NG A+ F + S +
Sbjct: 181 DVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCW 240
Query: 94 ------SYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
+N ++ L++ G AR +FD MP RD+ SWN MISG ++N + + A
Sbjct: 241 AFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 300
Query: 143 RNLFEMM-------------------PKR--------------------DVVSWNTMLSG 163
++ + M P+ D+ N +++
Sbjct: 301 LDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINM 360
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR----------------------- 200
YA+ G + AR+ F +M + +SWN ++AAY QN
Sbjct: 361 YAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTL 420
Query: 201 IEEACMLFES--------------KANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ A ++ +S + W +VV N+++ + K L A +F+ +P
Sbjct: 421 VSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIP 480
Query: 244 VRDEVSWNTMITGYAQNNYLAEA---QRLFEEAP--VKDVFTWTAMVSGYVQNGKVDEAR 298
V+D +SWNT+ITGYAQN +EA ++ EE + + TW +++ Y G + +
Sbjct: 481 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGM 540
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
I + + + ++ ++F A TC +I Y + G +
Sbjct: 541 KI------------------HGRVIKTNLHLDVFVA-TC--------LIDVYGKCGRLVD 573
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A +LF ++PQ ++W AII+ + G++E +L+LF EM G + + F S+LS C++
Sbjct: 574 AMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH 633
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNT 477
+E GK + + G + ++ + + G +E AY +++ + D W
Sbjct: 634 SGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGA 693
Query: 478 MIAGYARHG------FGKDALMLFESMKTVG 502
++ HG F D L +S K VG
Sbjct: 694 LLGACRIHGNIELGKFASDRLFEVDS-KNVG 723
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
K LH LV G F+ L+ +Y G V + F++I KDV +WN+MI+ Y
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 484 RHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+G +A+ F + V I+PD T +L AC K + + + + V
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVA 253
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+ ++ + R G A++L +MPF D +W A++ G A +A +V+
Sbjct: 254 AS----LIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN---AAQALDVLD 305
Query: 603 EMEPENAGM-YVLLSNLYAASGRWGDVSKVRL 633
EM E M +V + ++ + GD+S L
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAML 337
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 134/311 (43%), Gaps = 24/311 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + + + G DSA VF +P + +S+N +I+GY NG A +V+ M
Sbjct: 452 DVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME 511
Query: 120 Q-RDLV----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYA 170
+ ++++ +W ++ Y +L + + K DV ++ Y + G
Sbjct: 512 ECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 571
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGF 226
A +F ++ +++ ++WN +++ + +G E+ LF + V V++ SL+
Sbjct: 572 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 631
Query: 227 VKQKRLGDAKWIFDRMP---VRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTW 281
+ + KW F M ++ + + M+ + YL A ++ P++ D W
Sbjct: 632 SHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIW 691
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNT------VSWNAMIAGYVQTKRMDMARELFEAM 335
A++ +G ++ + D + E ++ V + + A + + +D R L
Sbjct: 692 GALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARER 751
Query: 336 TCKNVASWNTM 346
K W+T+
Sbjct: 752 GLKKTPGWSTI 762
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 272/845 (32%), Positives = 431/845 (51%), Gaps = 127/845 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN + + + G + A VF +P R VS+ A+I+G++ G A +F +M
Sbjct: 162 DSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMR 221
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
+ DL + ++ Y + +
Sbjct: 222 REGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMV 281
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG- 199
A +F MPK++ VSWN +L+G+AQ G A+ +F RM +EI+++ + V G
Sbjct: 282 LAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRM-TGSEINFSKFTLSTVLKGC 340
Query: 200 ------RIEEACMLFESKANWEVVSWNS--LMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
R + + E+ + S L+ + K GDA +F R+ D VSW+
Sbjct: 341 ANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWS 400
Query: 252 TMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSG-------------------- 287
+IT Q EA +F+ + + FT ++VS
Sbjct: 401 AIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKY 460
Query: 288 ---------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
Y++ G V + +F+A ++ +SWNA+++G+ + D +F
Sbjct: 461 GFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIF 520
Query: 333 EAM-----------------TCKNVASWN----------------------TMITGYAQS 353
M +C +++ + ++ YA++
Sbjct: 521 NQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKN 580
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
+ A +F+R+ + D +W I+AGYAQ G E +++ FI+M+R G + N S L
Sbjct: 581 RFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSL 640
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S C+ +A+L+ G+QLH +K G FV +AL+ MY KCG VE+A F+ +V +D +
Sbjct: 641 SGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 700
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWNT+I GY++HG G AL FE+M G PD++T +G+LSACSH GL+E+G ++F S+
Sbjct: 701 SWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSL 760
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
++ YG+ P +HY CMVD+LGRAG+ E ++ ++ M + W +LGAC+++G E
Sbjct: 761 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEF 820
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
E+AA +FE+EPE Y+LLSN++AA G W DV+ VR M RGVKK G SW+EV
Sbjct: 821 GERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNG 880
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+VH F D HP+ I+ L++L KL G+ +T VLH+V + EK+ +L YHSE+
Sbjct: 881 QVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSER 940
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+A+ +LS + IR+ KNLR+C DCH+ +K IS+I + +++RD N FHHF GSCS
Sbjct: 941 LALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCS 1000
Query: 774 CGDYW 778
C ++W
Sbjct: 1001 CQNFW 1005
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 146/602 (24%), Positives = 265/602 (44%), Gaps = 98/602 (16%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMP 150
Y+ M+ G L+ + + Q+ + D WN +++ Y + S + A +F +P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISW------------------ 188
+RDVVSW +++G+ GY A +F M +E NE ++
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 189 -----------------NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
+ L+ Y + G + A +F VSWN+L+ GF +
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQ--- 307
Query: 232 LGDAKWI---FDRMPVRD----EVSWNTMITGYAQNNYLAEAQRLFEEA----PVKDVFT 280
+GDA+ + F RM + + + +T++ G A + L Q + A D F
Sbjct: 308 MGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFI 367
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----- 335
+V Y + G +A +F + + + VSW+A+I Q + A E+F+ M
Sbjct: 368 SCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGV 427
Query: 336 -----------------------------TCK-----NVASWNTMITGYAQSGEITHARN 361
CK + N ++T Y + G +
Sbjct: 428 IPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCR 487
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+F+ D ISW A+++G+ + + LR+F +M G N F S+L +C++L+
Sbjct: 488 VFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 547
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
++LGKQ+H Q+VK + FVG AL+ MY K +E+A F ++ +D+ +W ++AG
Sbjct: 548 VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAG 607
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA+ G G+ A+ F M+ G+KP++ T+ LS CS ++ G + +SM G
Sbjct: 608 YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSG 666
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+ + +VD+ + G +++A+ + + D +W ++ +G+ A KA E +
Sbjct: 667 DMFVASALVDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALKAFEAM 725
Query: 602 FE 603
+
Sbjct: 726 LD 727
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 161/376 (42%), Gaps = 65/376 (17%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
++D N +T +M+ G VF + R +S+NA++SG+ N D ++F+Q
Sbjct: 463 EYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQ 522
Query: 118 M------PQ----------------------------------RDLVSWNVMISGYVRNK 137
M P D V ++ Y +N+
Sbjct: 523 MLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-TALVDMYAKNR 581
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA 193
L A +F + KRD+ +W +++GYAQ+G + A + F +M ++ NE + L+
Sbjct: 582 FLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLS 641
Query: 194 -----AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
A + +GR + M ++ + ++ ++L+ + K + DA+ +FD + RD V
Sbjct: 642 GCSRIATLDSGR-QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 700
Query: 249 SWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
SWNT+I GY+Q+ +A + FE E V D T+ ++S G ++E + F+++
Sbjct: 701 SWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSL 760
Query: 305 PEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMT-CKNVASWNTMITGYAQSGEITH 358
+ ++ + M+ + + E M NV W T++ G I
Sbjct: 761 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEF 820
Query: 359 ----ARNLFDRMPQHD 370
A LF+ P+ D
Sbjct: 821 GERAAMKLFELEPEID 836
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/753 (35%), Positives = 407/753 (54%), Gaps = 56/753 (7%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H + S + + YL Q+ AR++FD++P ++ WN +I Y N
Sbjct: 33 HFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDG 92
Query: 142 ARNLFEMM------PKR---------------------------------DVVSWNTMLS 162
A +L+ M P + DV ++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
YA+ G A+R+F M ++ ++WN ++A G ++A L + +S
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 223 MGGFV----KQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ G + + K LG K + R V ++ YA+ L A+++F+
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ---TKRMDMARE- 330
V++ +W+AM+ GYV + + EA +FD M K+ + + G V K D++R
Sbjct: 273 VRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
Query: 331 -----LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ + ++ NT+++ YA+ G I A FD M D +S++AI++G Q+G
Sbjct: 333 KLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNG 392
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ +L +F M+ G + + VL C++LA+L+ G HG L+ GF + N
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG + A F + D++SWN MI GY HG G +AL LF + +G+KP
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKP 512
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
DDIT + +LS+CSH+GLV +G +F +M+RD+ ++P +H CMVD+LGRAG +DEA +
Sbjct: 513 DDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF 572
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
++NMPFEPD W ALL ACR++ EL E+ ++ I + PE+ G +VLLSN+Y+A+GRW
Sbjct: 573 IRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRW 632
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
D + +R+ +D G+KK+ G SW+E+ VH F GD H + +I LEEL ++K+
Sbjct: 633 DDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRL 692
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+ V DV EEEKE +L YHSEKLA+A+GIL++ AGRPI V KNLRVC DCH AI
Sbjct: 693 GYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAI 752
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ++ I R I +RD NRFHHF G+C+CGD+W
Sbjct: 753 KFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 182/390 (46%), Gaps = 37/390 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + G A +F+SM R V++NAMI+G L G D A Q+ QM
Sbjct: 143 DVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQ 202
Query: 120 QRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRD----VVSWNTMLSGYAQNGYAD 171
+ + + I G + K+L + L +R VV +L YA+
Sbjct: 203 EEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLL 262
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-----SKANWEVVSWNSLMGGF 226
AR+IFD M +NE+SW+ ++ YV + ++EA LF+ + V+ S++
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Query: 227 VKQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
K L + +I V D + NT+++ YA+ + +A R F+ KD +++
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFS 382
Query: 283 AMVSGYVQNGKVDEARMIFDAM------PEKNTV--------SWNAMIAGYVQTKRMDMA 328
A+VSG VQNG A IF M P+ T+ A+ G+ + +
Sbjct: 383 AIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR 442
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+ + C N +I Y++ G+I+ AR +F+RM +HD +SW A+I GY G
Sbjct: 443 GFATDTLIC------NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
++L LF ++ G + + F +LS+C++
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSH 526
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 21/341 (6%)
Query: 304 MPEKNTVSWN--AMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG-----YAQSGEI 356
MP + V N ++ +Q+K + A+++ + KN ++ ++ + Y ++
Sbjct: 1 MPLRXEVKNNYLHLLEACIQSKSLTEAKKIHQHFL-KNTSNADSSVLHKLTRLYLSCNQV 59
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD +P I W II YA +G + ++ L+ M G R N+ + VL C
Sbjct: 60 VLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKAC 119
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
+ L ++E G ++H G E+ FV AL+ Y KCG + EA F + +DV++WN
Sbjct: 120 SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN 179
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNR 535
MIAG + +G DA+ L M+ GI P+ T+VG+L + G + Y + R
Sbjct: 180 AMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRR 239
Query: 536 --DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
D GV+ T ++D+ + L A+ + M + +W A++G Y ++
Sbjct: 240 SFDNGVVVG----TGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGG---YVXSDC 291
Query: 594 AEKAAEVIFEMEPENA--GMYVLLSNLYAASGRWGDVSKVR 632
++A E+ +M ++A V L ++ A + D+S+ R
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGR 332
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 287/793 (36%), Positives = 425/793 (53%), Gaps = 79/793 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVS-----YNAMISGYLLNGQLDPARQV 114
D W +T + +N + AL +F+ M N++++ Y G A +
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANL 228
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMPKR--------------------- 152
F +MP++D++SW+ MI+ Y N++ + A NLF EM+ KR
Sbjct: 229 FSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNL 288
Query: 153 -------------DVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAY 195
DVVSW +LSGYAQNG A + +F ML + + ++ +LAA
Sbjct: 289 EEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAAS 348
Query: 196 VQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
+ G ++A L S N V SL+ + K LGDA +F M VRD V W+
Sbjct: 349 SELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWS 408
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY-VQNGKVDEARMIFDAMPEKNTV 310
+MI Y + EA +F++ + + S Y + + + + +
Sbjct: 409 SMIAAYGIHGRGGEALEIFDQM----IQVMQGITSCYQISMQPQVQPPLAITSCTLATHI 464
Query: 311 SWNAMIAGYVQT--KRMDMARELFEA-------MTCKNVASW-----NTMITGYA----Q 352
W A Y++ + + E+F M+ N+ ++ + ++T +A
Sbjct: 465 PWKVK-AFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVS 523
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-------N 405
I A +F+ +P W +I G+A G SL L+ +M G + N
Sbjct: 524 FNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPN 583
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
R SVL C NL +L G+ H +++ GFE V A++ MY KCGS++ A F+
Sbjct: 584 RVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFD 643
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
E KD++ W+ MIA Y HG G+ A+ LF+ M G++P +T +LSACSH+GL+E+
Sbjct: 644 ETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 703
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G YF M ++ + +Y CMVDLLGRAG+L EA +L++NMP EPDA+ WG+LLGAC
Sbjct: 704 GKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC 763
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R++ +LAEK A+ +F ++P +AG +VLLSN+YAA RW +V KVR M RG K+ G
Sbjct: 764 RIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQG 823
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
+S +E N+VH F VGD HP+ +++YA LEEL +K G+V T VLHD+ EE KE
Sbjct: 824 FSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEA 883
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L YHSE+LA+A+G+++ G +R+ KNLR+C DCHNAIK ISKIV R+I++RD +RFH
Sbjct: 884 ALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFH 943
Query: 766 HFSGGSCSCGDYW 778
F G CSCGDYW
Sbjct: 944 RFEDGVCSCGDYW 956
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 200/410 (48%), Gaps = 23/410 (5%)
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
QVF D + S Y + SL AAR +F+ P +V WN+ L Y + +
Sbjct: 26 QVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEE 85
Query: 173 ARRIFDRML-EKNEISWNGLLAAYVQNG---RIEEACMLFE--SKANWEVVS----WNSL 222
R+F M+ E N + ++ R+ E + +K N E+ S ++L
Sbjct: 86 TLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSAL 145
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF--- 279
+ + K ++G+A +F+ D V W +M+TGY QNN EA LF + + D F
Sbjct: 146 VELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGD 205
Query: 280 --TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
++++ Y + G A +F MPEK+ +SW+ MIA Y + + A LF M
Sbjct: 206 LPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIE 265
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQH------DCISWAAIIAGYAQSGYSEDSL 391
K + + Q+ ++ RNL + H D +SW A+++GYAQ+G + S+
Sbjct: 266 KRFEPNSVTVVSALQACAVS--RNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSM 323
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+F M G + + +L+ + L + LHG +V+ GF + FVG +L+ +Y
Sbjct: 324 GVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELY 383
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
KCGS+ +A F+ ++ +DV+ W++MIA Y HG G +AL +F+ M V
Sbjct: 384 SKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQV 433
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 130/547 (23%), Positives = 220/547 (40%), Gaps = 78/547 (14%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+A++ Y GQ+ A +VF++ + D V W M++GY +N A LF M D
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCF 202
Query: 156 SW-----NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-- 208
N++L+ YA+ G A +F +M EK+ ISW+ ++A Y N EA LF
Sbjct: 203 DGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHE 262
Query: 209 --ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
E + V+ S + + L + K I +D VSW +++GYAQN ++
Sbjct: 263 MIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKS 322
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+F M+S +Q V + I A E + GYV
Sbjct: 323 MGVFRN-----------MLSDGIQPDAVAVVK-ILAASSELGIFQQALCLHGYV------ 364
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
R F + NV ++I Y++ G + A LF M D + W+++IA Y G
Sbjct: 365 -VRSGFNS----NVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 419
Query: 387 SEDSLRLFIEMKRYGERLN-----------RSPFTSVLSTCAN----------------- 418
++L +F +M + + + + P T A
Sbjct: 420 GGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRW 479
Query: 419 ---------LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+ + G + + +MY ++ A FE+I +
Sbjct: 480 LGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPN 539
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD-------ITMVGILSACSHTGL 522
WN MI G+A G +L L+ M G+KPD+ ++++ +L AC + G
Sbjct: 540 PCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGA 599
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ KG E+F+S G + T ++D+ + G LD A+ L + D W A++
Sbjct: 600 LRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DLVCWSAMI 657
Query: 583 GACRLYG 589
+ ++G
Sbjct: 658 ASYGIHG 664
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 164/418 (39%), Gaps = 84/418 (20%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
++F+ + D F T + S Y + + AR +FD P N WN+ + Y + K+ +
Sbjct: 26 QVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEE 85
Query: 328 ARELFEAMTC-----------------------------------KNVASWNTMITG--- 349
LF M C KN + M G
Sbjct: 86 TLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSAL 145
Query: 350 ---YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
Y++ G++ A +F+ + D + W +++ GY Q+ E++L LF +M
Sbjct: 146 VELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM--------- 196
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
V+ C F+ + N+LL +Y K G + A + F +
Sbjct: 197 -----VMMDC--------------------FDGDLPLVNSLLNLYAKTGCEKIAANLFSK 231
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ +KDVISW+TMIA YA + +AL LF M +P+ +T+V L AC+ + +E+G
Sbjct: 232 MPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 291
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM---PFEPDAATWGALLG 583
+ V + + ++ + G ++ + +NM +PDA +L
Sbjct: 292 KKI-----HKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILA 346
Query: 584 ACRLYGKTELAEKA-AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
A G + A V+ N + L LY+ G GD K+ M R V
Sbjct: 347 ASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDV 404
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 7/239 (2%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R + C N S+ QLH Q+ K G F L +Y KC S++ A F
Sbjct: 3 SRQVLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK-TVGIKPDDITMVGILSACSHTGLV 523
+E +V WN+ + Y R ++ L LF M T G PD+ T+ L AC+ ++
Sbjct: 60 DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E G ++ + + + +V+L + G++ EA + + PD W +++
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVT 178
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVL--LSNLYAASGRWGDVSKVRLKMRDRGV 640
+ E A + M+ + + ++ L NLYA +G + + KM ++ V
Sbjct: 179 GYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDV 237
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/684 (35%), Positives = 411/684 (60%), Gaps = 32/684 (4%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK--- 183
N +++ Y ++++L A +FE +P+ DV SW ++SG+A+ G + +F +M ++
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 184 -NEISWNGLL---AAYVQNGRIEEACM--LFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
N+ + + +L ++ V + RI + + + + + V NS++ +VK + G A+
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG----K 293
+F M +D VSWN M++ Y Q + ++ LF + P KD +W M+ G ++NG
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITG 349
++ + A P N ++++ + + + +++ + V N++I
Sbjct: 505 LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDM 564
Query: 350 YAQSGEITHARNLFDRMPQH---------------DCISWAAIIAGYAQSGYSEDSLRLF 394
Y + GE+ A +F +PQ + +SW+++++GY Q+G ED+L+ F
Sbjct: 565 YCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTF 624
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M +++ TSV+S CA+ LELG+Q+HG + K+G F+G++++ MY KC
Sbjct: 625 SFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKC 684
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GS+ +A+ F + D++V+ W +MI+G A HG G++A+ LFE M GI P++++ VG+L
Sbjct: 685 GSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVL 744
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ACSH GL+E+G +YF M YG+ P ++H+TCMVDL GRAGRL+E + + N
Sbjct: 745 TACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKL 804
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
++ W + L +CR++ E+ + + E+EP +AG Y+L S++ A RW + +K+R
Sbjct: 805 SSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSL 864
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
M+ RGVKK SW++++N+VH+F +GD HP+ +IY+YL+EL +LK+ G+ V
Sbjct: 865 MQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPV 924
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
+ DV +E+++ +L YHSEKLA+AYGI+S G PIRVMKNLRVC DCHN IK+ S+++GR
Sbjct: 925 MQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGR 984
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
II+RD +RFHHF G CSC DYW
Sbjct: 985 EIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 174/382 (45%), Gaps = 39/382 (10%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
A ++F M ++D VSWN+M+S Y++ + + +LF +P +D SWNTM+ G +NG
Sbjct: 442 AEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCE 501
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
A + +M+ ++N L + + + + + +V+ L GFV+
Sbjct: 502 RVALELLYKMVAAGP-AFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNS 560
Query: 231 ---------RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
+ A IF +P Q + + ++ ++A V+ V +W
Sbjct: 561 LIDMYCKCGEMEKASVIFKHLP---------------QESSMMNSEESCDDAVVESV-SW 604
Query: 282 TAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT- 336
++MVSGYVQNG+ ++A F M E + + ++++ +++ R++ +
Sbjct: 605 SSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQK 664
Query: 337 ---CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+V +++I Y + G + A +F++ + + W ++I+G A G +++RL
Sbjct: 665 IGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRL 724
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYC 452
F M G N F VL+ C++ LE G + + +V G G ++ +Y
Sbjct: 725 FELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYG 784
Query: 453 KCGSVEEAYHAFEEIVDKDVIS 474
+ G + E +E + + IS
Sbjct: 785 RAGRLNE----IKEFIHNNAIS 802
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 192/427 (44%), Gaps = 44/427 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D N + +++ C A +F M + +VS+N M+S YL G + + +F Q
Sbjct: 420 DLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQ 479
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAA 173
+P +D SWN MI G +RN A L M P + ++++ L +
Sbjct: 480 LPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLG 539
Query: 174 RRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFE---------------SKANW 214
++I ++L+ + N L+ Y + G +E+A ++F+ A
Sbjct: 540 KQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVV 599
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF 270
E VSW+S++ G+V+ R DA F M D+ + ++++ A L +++
Sbjct: 600 ESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVH 659
Query: 271 ----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+ DVF ++++ YV+ G +++A +IF+ ++N V W +MI+G +
Sbjct: 660 GYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGR 719
Query: 327 MARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAI 377
A LFE M N S+ ++T + +G + F M + I + +
Sbjct: 720 EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCM 779
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-G 436
+ Y ++G + ++ FI + S + S LS+C ++E+G + +L+++
Sbjct: 780 VDLYGRAG-RLNEIKEFIHNNAISKL--SSVWRSFLSSCRVHKNIEMGIWVCKKLLELEP 836
Query: 437 FEAGCFV 443
F+AG ++
Sbjct: 837 FDAGPYI 843
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGC--FVGNALLVMYCKCGSVEEAYHAFEE 466
F+S S N + E+ LH +L+K GC GN LL +Y K ++E+A+ FEE
Sbjct: 294 FSSTFSDSMNYPNSEV---LHAKLIK----NGCVGIRGNHLLNLYAKSQNLEQAHKMFEE 346
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
I DV SW +I+G+AR G D L LF M+ G+ P+ T+ +L +CS
Sbjct: 347 IPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/549 (42%), Positives = 339/549 (61%), Gaps = 6/549 (1%)
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPV-KDVFTWTAMVSGYV 289
A+ +FD P + WN+MI Y ++ EA ++ E+ + +DVF +V Y
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYS 161
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+ G + AR +FD MP+++ V+WNAMIAG Q++ +AR +F+ M ++ SW TM+ G
Sbjct: 162 KMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAG 221
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA +G LFD+M + ++W IIA Y Q+G++++++ F +M+ N F
Sbjct: 222 YAHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 280
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
SVL A LA+ G H ++++GF + VGN+L+ MY KCG ++ + F E+
Sbjct: 281 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH 340
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
KD +SWN M++GYA HG G A+ LF M+ ++ D ++ V +LSAC H GLVE+G +
Sbjct: 341 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKI 400
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F+SM+ Y + P+ +HY CMVDLLGRAG DE +K MP EPDA WGALLG+CR++
Sbjct: 401 FHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHS 460
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
+L E A + + ++EP N +V+LS++YA SGRW D K R KM D G+KK G SW+
Sbjct: 461 NVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWV 520
Query: 650 EVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY 709
E++NKVH F VGD HP+ + ++ L K+++ G+V VL +V EE+KE L
Sbjct: 521 ELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYS 580
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSE+LA+ + +L+ P G I+++KNLRVC DCH K ISKI R II+RD RFHHF
Sbjct: 581 HSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFED 640
Query: 770 GSCSCGDYW 778
G CSC DYW
Sbjct: 641 GICSCNDYW 649
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 192/400 (48%), Gaps = 36/400 (9%)
Query: 5 NRLRQLHSSCIL--HQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIR 62
N L Q+H+ I+ +H SI L N K L R + + N +
Sbjct: 66 NPLLQIHAQIIVSGFKHHHSITHL---INLYSLFHKCDLARSVFDSTPNPSRIL------ 116
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-----GQLDPARQVFDQ 117
WN I + R+ + AL ++ M + + + I L++ G L AR+VFD+
Sbjct: 117 -WNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDK 175
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+RD+V+WN MI+G +++ AR +F+ M +D VSW TM++GYA NG +F
Sbjct: 176 MPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELF 235
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLM--GGFVKQKR 231
D+M N ++WN ++AAY+QNG +EA F + V++ S++ ++ R
Sbjct: 236 DKMKLGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFR 294
Query: 232 LGDA--KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
G A I + + + N++I YA+ L +++LF E KD +W AM+SGY
Sbjct: 295 EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYA 354
Query: 290 QNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NV 340
+G D A +F M E ++VS+ ++++ ++ R++F +M+ K ++
Sbjct: 355 VHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDL 414
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIA 379
+ M+ ++G MP + D W A++
Sbjct: 415 EHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLG 454
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 189/381 (49%), Gaps = 26/381 (6%)
Query: 77 CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG---- 132
CD A VF+S P S + +N+MI Y + Q + A +++ M ++ + +V I
Sbjct: 99 CDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVD 158
Query: 133 -YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
Y + L AR +F+ MPKRDVV+WN M++G +Q+ ARR+FD+M++++++SW +
Sbjct: 159 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTM 218
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSW 250
+A Y NG E LF+ K V+WN ++ +++ +A F +M + + +
Sbjct: 219 MAGYAHNGCFVEVLELFD-KMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 277
Query: 251 NTMITGYAQNNYLAEAQR-------LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
T ++ YLA + + + + + +++ Y + G++D + +F+
Sbjct: 278 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNE 337
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHA 359
M K+TVSWNAM++GY D A LF M V S+ ++++ +G +
Sbjct: 338 MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEG 397
Query: 360 RNLFDRMP-----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
R +F M + D +A ++ ++G +++L +K + + ++L
Sbjct: 398 RKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGF---IKVMPVEPDAGVWGALLG 454
Query: 415 TCANLASLELGKQLHGQLVKV 435
+C ++++LG+ LVK+
Sbjct: 455 SCRMHSNVKLGEVALDHLVKL 475
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 186/458 (40%), Gaps = 117/458 (25%)
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK------------ 230
K+ S L+ Y + + A +F+S N + WNS++ + + K
Sbjct: 81 KHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM 140
Query: 231 ---------------------RLGD---AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
++GD A+ +FD+MP RD V+WN MI G +Q+ A
Sbjct: 141 VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVA 200
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+R+F++ +D +W M++GY NG E +FD M N V+WN +IA Y+Q
Sbjct: 201 RRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHAK 259
Query: 327 MARELFEAMTCKN-----------------VASW----------------------NTMI 347
A F M +N +A++ N++I
Sbjct: 260 EAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLI 319
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA+ G++ ++ LF+ M D +SW A+++GYA G+ + ++ LF M+ +++
Sbjct: 320 DMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSV 379
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F SVLS C + +E G+++ S+ + YH
Sbjct: 380 SFVSVLSACRHAGLVEEGRKIF-------------------------HSMSDKYH----- 409
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVE 524
+ D+ + M+ R G + L +K + ++PD +L +C S+ L E
Sbjct: 410 IKPDLEHYACMVDLLGRAGLFDETLGF---IKVMPVEPDAGVWGALLGSCRMHSNVKLGE 466
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
++ + N H+ + + ++GR +A
Sbjct: 467 VALDHLVKLEPR-----NPAHFVVLSSIYAQSGRWADA 499
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----Q 120
N I + + G D + +FN M + +VS+NAM+SGY ++G D A +F M Q
Sbjct: 316 NSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 375
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMP-----KRDVVSWNTMLSGYAQNGYADAARR 175
D VS+ ++S + R +F M K D+ + M+ + G D
Sbjct: 376 IDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 435
Query: 176 IFDRM-LEKNEISWNGLLAA 194
M +E + W LL +
Sbjct: 436 FIKVMPVEPDAGVWGALLGS 455
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/677 (38%), Positives = 389/677 (57%), Gaps = 34/677 (5%)
Query: 124 VSWNVM---ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
VSW + I G+V K L RDV N ++ Y + + AR +FD+M
Sbjct: 107 VSWTQLGKEIHGFVLKKGLD-----------RDVFVGNALMLMYGECACVEYARLVFDKM 155
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQK--RLGD 234
+E++ +SW+ ++ + +N + A L +V V+ S++ F R+G
Sbjct: 156 MERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGK 215
Query: 235 AKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
A + +E + ++ YA+ +L A++LF K V +WTAM++G ++
Sbjct: 216 AMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIR 275
Query: 291 NGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VA 341
+ +++E +F M E+N ++ ++I T + + ++L A +N +A
Sbjct: 276 SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQL-HAYILRNGFSVSLA 334
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
++ Y + +I +AR LFD D + W A+++ YAQ+ + + LF +M+ G
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
R + S+LS CA +L+LGK +H + K E C + AL+ MY KCG + A
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 454
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F E + +D+ WN +I G+A HG+G++AL +F M+ G+KP+DIT +G+L ACSH G
Sbjct: 455 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV +G + F M +G++P +HY CMVDLLGRAG LDEA ++K+MP +P+ WGAL
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 574
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
+ ACRL+ +L E AA + E+EPEN G VL+SN+YAA+ RW D + VR M+ G+K
Sbjct: 575 VAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMK 634
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G+S +EV VH F +GD HP+ RI L E+ KL + G+V T VL ++ EE
Sbjct: 635 KEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEE 694
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EKE L YHSEKLA+A+G++S PIR++KNLRVC DCH A K +SKI GR+II+RD
Sbjct: 695 EKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDR 754
Query: 762 NRFHHFSGGSCSCGDYW 778
NRFHHF G CSCGDYW
Sbjct: 755 NRFHHFREGYCSCGDYW 771
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 200/457 (43%), Gaps = 75/457 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA------RNLFEMM 149
NA++ Y ++ AR VFD+M +RD+VSW+ MI RNK A N ++
Sbjct: 133 NALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVR 192
Query: 150 PKR-----------------------------------DVVSWNTMLSGYAQNGYADAAR 174
P V + +L YA+ G+ AR
Sbjct: 193 PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR 252
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLM--GGFVK 228
++F+ + +K +SW ++A +++ R+EE LF E ++ SL+ GF
Sbjct: 253 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTG 312
Query: 229 QKRLGD---AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+LG A + + V ++ ++ Y + + + A+ LF+ +DV WTAM+
Sbjct: 313 ALQLGKQLHAYILRNGFSVSLALA-TALVDMYGKCSDIRNARALFDSTQNRDVMIWTAML 371
Query: 286 SGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
S Y Q +D+A +FD M P K T+ ++++ +D+ + + + +
Sbjct: 372 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIV--SLLSLCAVAGALDLGKWVHSYIDKER 429
Query: 340 V---ASWNT-MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
V NT ++ YA+ G+I A LF D W AII G+A GY E++L +F
Sbjct: 430 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 489
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GF-----EAGCFVGNALLV 449
EM+R G + N F +L C++ + GK+L ++V G GC V
Sbjct: 490 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD----- 544
Query: 450 MYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ + G ++EA+ + + + + I W ++A H
Sbjct: 545 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 581
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
SVL C ++ +LGK++HG ++K G + FVGNAL++MY +C VE A F++++++
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-- 528
DV+SW+TMI +R+ AL L M + ++P ++ MV +++ + T + G
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 529 --YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ N ++ +P + T ++D+ + G L A+ L + + +W A++ C
Sbjct: 219 AYVIRNSNNEHMGVPTT---TALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAMIAGCI 274
Query: 587 LYGKTELAEKAAEVIFEMEPEN 608
++ E+ ++ M+ EN
Sbjct: 275 ---RSNRLEEGTKLFIRMQEEN 293
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 155/372 (41%), Gaps = 58/372 (15%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSV-SYNAMISGYLLNGQLDPARQVFDQMPQRDLVS 125
A T +MR G A + NS V + A++ Y G L ARQ+F+ + Q+ +VS
Sbjct: 206 ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 265
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN-TMLSGYAQNGYADA------------ 172
W MI+G +R+ L LF M + ++ TMLS + G+ A
Sbjct: 266 WTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYIL 325
Query: 173 --------------------------ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM 206
AR +FD ++ + W +L+AY Q I++A
Sbjct: 326 RNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFN 385
Query: 207 LFESKANWEV----VSWNSLMGGFVKQKRLGDAKWI---FDRMPVRDEVSWNT-MITGYA 258
LF+ V V+ SL+ L KW+ D+ V + NT ++ YA
Sbjct: 386 LFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYA 445
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNA 314
+ + A RLF EA +D+ W A+++G+ +G +EA IF M + N +++
Sbjct: 446 KCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIG 505
Query: 315 MIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-Q 368
++ + ++LFE M + + M+ ++G + A + MP +
Sbjct: 506 LLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIK 565
Query: 369 HDCISWAAIIAG 380
+ I W A++A
Sbjct: 566 PNTIVWGALVAA 577
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 108/237 (45%), Gaps = 22/237 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ W ++ + + C D A ++F+ M R + V+ +++S + G LD + V
Sbjct: 363 DVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVH 422
Query: 116 DQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + D + ++ Y + ++AA LF RD+ WN +++G+A +GY +
Sbjct: 423 SYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGE 482
Query: 172 AARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW-----EVVSWNSL 222
A IF M ++ N+I++ GLL A G + E LFE + ++ + +
Sbjct: 483 EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCM 542
Query: 223 MGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEAP 274
+ + L +A + MP++ + + W ++ +N L E A +L E P
Sbjct: 543 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEP 599
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 289/833 (34%), Positives = 432/833 (51%), Gaps = 128/833 (15%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP------------- 119
+ GC A +F+ MP ++ ++NAMI Y+ NG+ + +++ +M
Sbjct: 162 KCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPC 221
Query: 120 ----------------------QRDLVSW----NVMISGYVRNKSLSAARNLFEMMP-KR 152
+ VS N ++ Y + L+ AR LF+ MP K
Sbjct: 222 ILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE 281
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEE 203
DVVSWN+M+S Y+ NG + A R+F M L N ++ L A +++ G
Sbjct: 282 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 341
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
A +L +S V N+L+ + + ++G+A IF M D +SWN+M++G+ QN
Sbjct: 342 ATVL-KSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLY 400
Query: 264 AEAQRLFEE------------------APVK---------------------DVFTWTAM 284
EA + + E A + D+ ++
Sbjct: 401 HEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSL 460
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--------- 335
V Y + + IFD MP+K+ VSW +IAG+ Q A ELF +
Sbjct: 461 VDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 520
Query: 336 -----------------TCKNVASW------------NTMITGYAQSGEITHARNLFDRM 366
+ K + S+ N ++ Y + G + +A +F+ +
Sbjct: 521 MMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELI 580
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D +SW ++I+ Y +G + ++L LF MK G + S+LS A+L++L+ GK
Sbjct: 581 EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGK 640
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
++HG L++ GF + + L+ MY +CG++E++ + F I +KD++ W +MI Y HG
Sbjct: 641 EIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHG 700
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
G+ A+ LF M+ I PD I V +L ACSH+GL+ +G + SM +Y + P +HY
Sbjct: 701 CGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHY 760
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
C+VDLLGRA L+EA +K M EP A W ALLGAC+++ EL E AA+ + EM+P
Sbjct: 761 VCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDP 820
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
EN G YVL+SN+YAA RW DV +VR++M+ G+KK G SW+EV NKVHTF D HP
Sbjct: 821 ENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHP 880
Query: 667 EKDRIYAYLEELEFKL-KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
+ IY+ L ++ KL K+ G+V TK VLH+ EEEK ML HSE+LA+AYG+L+ P
Sbjct: 881 QSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPE 940
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G +R+ KNLRVC DCHN K ISK R +++RD NRFHHF GG CSCGD W
Sbjct: 941 GASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 192/383 (50%), Gaps = 18/383 (4%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP------E 306
++ Y + L +A++LF+ P K +FTW AM+ YV NG+ + ++ M +
Sbjct: 156 LVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLD 215
Query: 307 KNTVSWNAMIAGYVQTKR--MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
T G ++ +R ++ + V N+++ Y + ++ AR LFD
Sbjct: 216 ACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 275
Query: 365 RMPQ-HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
RMP+ D +SW ++I+ Y+ +G S ++LRLF EM++ N F + L C + + ++
Sbjct: 276 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIK 335
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G +H ++K + FV NAL+ MY + G + EA + F + D D ISWN+M++G+
Sbjct: 336 QGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFV 395
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPN 542
++G +AL + M+ G KPD + ++ I++A + +G G + + Y+M G+ +
Sbjct: 396 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKN--GLDSD 453
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+ +VD+ + + + MP + D +W ++ + + +A E+
Sbjct: 454 LQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAG---HAQNGSHSRALELFR 509
Query: 603 EMEPENAGMYVLL--SNLYAASG 623
E++ E + V++ S L A SG
Sbjct: 510 EVQLEGIDLDVMMISSILLACSG 532
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 11/286 (3%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y + G + A LFD MP +W A+I Y +G SL L+ EM+ G L+
Sbjct: 156 LVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLD 215
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
F +L C L G ++HG +K G+ + FV N+++ MY KC + A F+
Sbjct: 216 ACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 275
Query: 466 EIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ +K DV+SWN+MI+ Y+ +G +AL LF M+ + P+ T V L AC + ++
Sbjct: 276 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIK 335
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + ++ N ++ + R G++ EA N+ NM + D +W ++L
Sbjct: 336 QGM-FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD-DWDTISWNSMLSG 393
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAASGRWGD 627
+ + L +A + EM +AG V + ++ AAS R G+
Sbjct: 394 ---FVQNGLYHEALQFYHEM--RDAGQKPDLVAVISIIAASARSGN 434
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 42/388 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMI-----SGYLLNGQL 108
DWD WN ++ ++NG AL ++ M + V+ ++I SG LNG
Sbjct: 381 DWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQ 440
Query: 109 DPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
A + + + DL N ++ Y + S+ +F+ MP +DVVSW T+++G+AQNG
Sbjct: 441 IHAYAMKNGL-DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 499
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
A +F E+ G+ + I AC + +++S + ++
Sbjct: 500 SHSRALELF------REVQLEGIDLDVMMISSILLAC------SGLKLISSVKEIHSYII 547
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+K L D V N ++ Y + + A R+FE KDV +WT+M+S Y
Sbjct: 548 RKGLSDL------------VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCY 595
Query: 289 VQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV---- 340
V NG +EA +F M E +++S ++++ + +E+ + K
Sbjct: 596 VHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEG 655
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
+ +T++ YA+ G + +RN+F+ + D + W ++I Y G ++ LF M+
Sbjct: 656 SLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDE 715
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQL 428
+ F +VL C++ + G++
Sbjct: 716 SIAPDHIAFVAVLYACSHSGLMNEGRRF 743
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 405 NRSP--------FTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCG 455
N+SP ++SVL C + +L G+Q+H ++ F+ L+ MY KCG
Sbjct: 105 NQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCG 164
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ +A F+ + K + +WN MI Y +G +L L+ M+ GI D T IL
Sbjct: 165 CLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILK 224
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC G E + + G + +V + + L+ A+ L MP + D
Sbjct: 225 ACGLLKDRRCGAE-VHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDV 283
Query: 576 ATWGALLG----------ACRLYGKTELAEKA 597
+W +++ A RL+G+ + A A
Sbjct: 284 VSWNSMISAYSSNGQSIEALRLFGEMQKASLA 315
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/616 (40%), Positives = 368/616 (59%), Gaps = 12/616 (1%)
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KR 231
AR IFDR+ ++ I WN ++ YV+N + +LF + E + N + +K R
Sbjct: 66 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCAR 124
Query: 232 LG---DAKWIFDRMPVR-----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
LG + K I + ++ D +++ Y++ + A+++F+ KDV W +
Sbjct: 125 LGVVQEGKQIHG-LALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNS 183
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW 343
++ GY + G++D A +F+ MPE++ SW ++ G + +++ AR+LF+ M C+N+ SW
Sbjct: 184 LIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSW 243
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N MI GY +SG+ A LF +MP D ++W +IAGY +G D++++F M + G R
Sbjct: 244 NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSR 303
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ + SVLS + LA L G+ +H + K GFE +G +L+ MY KCG +E A
Sbjct: 304 PSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTV 363
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F I K V W +I G HG AL LF M G+KP+ I +G+L+AC+H GLV
Sbjct: 364 FRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLV 423
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+ G +YF M +Y + P +HY C+VD+L RAG L+EA+N ++NMP P+ W +LLG
Sbjct: 424 DDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLG 483
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
R +GK ++ E AA+ + E+ PE G Y+LLSN+YAASG W VS VR M RG +K
Sbjct: 484 GSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKD 543
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV-GEEE 702
G S +E + +H F VGD HP+ IYA + E++ KLK G V T VL + GE+E
Sbjct: 544 PGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKE 603
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE L HSE+LA+A+G++++ G PIR+MKNLRVC DCH+ K +SKI R II+RDN
Sbjct: 604 KEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNC 663
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF GSCSC DYW
Sbjct: 664 RFHHFKNGSCSCMDYW 679
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 224/499 (44%), Gaps = 65/499 (13%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP-------ARQVFDQMPQRDLVSWNV 128
C + ++ ++++ + +S LL DP AR +FD++ +R L+ WN
Sbjct: 24 CAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNT 83
Query: 129 MISGYVRNKSLSAARNLF-----EMMPKR------------------------------- 152
+I YV N+ LF E +P
Sbjct: 84 IIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGF 143
Query: 153 --DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
DV ++++ Y++ G D AR++FD M++K+ + WN L+ Y + G I+ A LFE
Sbjct: 144 GSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEE 203
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+ SW L+ G K ++ A+ +FD+MP R+ VSWN MI GY ++ A LF
Sbjct: 204 MPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELF 263
Query: 271 EEAPVKDVFTWTAMVSGYVQNGK-VDEARMIFDAM-----PEKNT-VSWNAMIAGYVQTK 323
+ P+ D+ TW M++GY NG+ +D +M F + P T VS + ++G
Sbjct: 264 YQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLG 323
Query: 324 RMD-----MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ M + FE + ++I YA+ G I A +F + + W AII
Sbjct: 324 KGRWIHSYMEKNGFEL----DGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAII 379
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGF 437
G G + +L LF+EM + G + N F VL+ C + ++ G+Q ++ +
Sbjct: 380 VGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKI 439
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFE 496
E L+ + C+ G +EEA + E + + + + W +++ G H GK + +
Sbjct: 440 EPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNH--GKIDIGEYA 497
Query: 497 SMKTVGIKPDDITMVGILS 515
+ + + + P+ I +LS
Sbjct: 498 AQRVIEVAPETIGCYILLS 516
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 165/339 (48%), Gaps = 24/339 (7%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ + + G D A VF+ M + V +N++I GY G++D A Q+F++MP+RD SW
Sbjct: 154 VNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWT 213
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
V++ G + + +AR LF+ MP R++VSWN M++GY ++G D+A +F +M + ++
Sbjct: 214 VLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVT 273
Query: 188 WNGLLAAYVQNGRIEEACMLF-------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
WN ++A Y NG+ +A +F ++ +VS S + G LG +WI
Sbjct: 274 WNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAV---LGKGRWIHS 330
Query: 241 RMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
M D + ++I YA+ + A +F K V WTA++ G +G +
Sbjct: 331 YMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANH 390
Query: 297 ARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMI 347
A +F M + N + + ++ +D R+ F+ M + + + ++
Sbjct: 391 ALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLV 450
Query: 348 TGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSG 385
++G + A+N + MP + + W +++ G G
Sbjct: 451 DILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 489
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 137/278 (49%), Gaps = 19/278 (6%)
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSPFTSVL 413
++ +AR++FDR+ + I W II Y ++ +S D + LF E+ E L + V+
Sbjct: 62 DLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH--EYLPDNFTLPCVI 119
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
CA L ++ GKQ+HG +K+GF + FV +L+ MY KCG ++ A F+ ++DKDV+
Sbjct: 120 KGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVV 179
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
WN++I GYAR G AL LFE M + D + ++ S G VE + F M
Sbjct: 180 LWNSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFDQM 235
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
N + M++ ++G D A L MP D TW ++ L G+
Sbjct: 236 P-----CRNLVSWNAMINGYMKSGDFDSALELFYQMPIW-DLVTWNLMIAGYELNGQFMD 289
Query: 594 AEKAAEVIFEM--EPENAGMYVLLSNLYA----ASGRW 625
A K ++ ++ P +A + +LS + GRW
Sbjct: 290 AVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRW 327
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYC--KCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
+QLH +K FV + LL +Y K + A F+ I + +I WNT+I Y
Sbjct: 30 EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+ F D ++LF + + PD+ T+ ++ C+ G+V++G + + + G +
Sbjct: 90 ENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQ-IHGLALKIGFGSDV 147
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+V++ + G +D A+ + M + D W +L+ G+ ++A + E E
Sbjct: 148 FVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGYARCGEIDIALQLFE---E 203
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
M +A + +L + + G+ K+ +M R +
Sbjct: 204 MPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNL 240
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 281/839 (33%), Positives = 420/839 (50%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-GQLDPARQVFDQ-----M 118
N I + RNG D A VF+ + + S+ AMISG N +++ R D M
Sbjct: 209 NPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIM 268
Query: 119 P---------------------------------QRDLVSWNVMISGYVRNKSLSAARNL 145
P D N ++S Y SL +A ++
Sbjct: 269 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHI 328
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M +RD V++NT+++G +Q GY + A +F RM LE + + L+ A +G +
Sbjct: 329 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTL 388
Query: 202 EEACMLFESKANWEVVSWNSLMGG----FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
L S + + G + K + A F V + V WN M+ Y
Sbjct: 389 FSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY 448
Query: 258 AQNNYLAEAQRLFEEAPVKDV--------------------------------------- 278
+ L + R+F + ++++
Sbjct: 449 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNA 508
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+ + ++ Y + GK+D A I K+ VSW MIAGY Q D A F M +
Sbjct: 509 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 568
Query: 339 NVAS---------------------------------------WNTMITGYAQSGEITHA 359
+ S N ++T Y++ G I A
Sbjct: 569 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEA 628
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F++ D I+W A+++G+ QSG +E++LR+F M R G N F S + +
Sbjct: 629 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASET 688
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++ GKQ+H + K G+++ V NA++ MY KCGS+ +A F E+ K+ +SWN MI
Sbjct: 689 ANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMI 748
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
Y++HGFG +AL F+ M ++P+ +T+VG+LSACSH GLV+KG EYF SMN +YG+
Sbjct: 749 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGL 808
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P +HY C+VD+L RAG L A++ + MP EPDA W LL AC ++ E+ E AA
Sbjct: 809 APKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAH 868
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPE++ YVLLSNLYA +W R KM+++GVKK G SW+EV+N +H+F
Sbjct: 869 HLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 928
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD HP D I+ Y ++L + + G+V +L ++ +E+K+ + HSEKLA+++G
Sbjct: 929 VGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFG 988
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+PA PI VMKNLRVC DCH+ IK +SK+ R II+RD RFHHF GG+CSC DYW
Sbjct: 989 LLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 146/563 (25%), Positives = 243/563 (43%), Gaps = 78/563 (13%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA-ARNLFEMMPKRDVVS 156
++ YL G LD A +VFD+MP+R + +WN MI + ++SLS LF M +V
Sbjct: 109 LLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKE-LASRSLSGKVFCLFGRMVNENVTP 167
Query: 157 WNTMLSGYAQNGYA-----DAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
SG + D +I R+ L K+ I N L+ Y +NG ++ A +
Sbjct: 168 NEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRV 227
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F+ + SW +++ G K + +A +F M V M T YA ++ L+ +
Sbjct: 228 FDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYV-----LGIMPTPYAFSSVLSACK 282
Query: 268 RL-------------FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
++ + D + A+VS Y G + A IF M +++ V++N
Sbjct: 283 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNT 342
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNV--------------ASWNTMITG----------- 349
+I G Q + A ELF+ M + +S T+ +G
Sbjct: 343 LINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLG 402
Query: 350 --------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
YA+ +I A N F + + W ++ Y +S R+F
Sbjct: 403 FASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 462
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+M+ N+ + S+L TC L LELG+Q+H Q++K F+ +V + L+ MY K G
Sbjct: 463 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLG 522
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
++ A+ KDV+SW TMIAGY ++ F AL F M GI+ D++ + +S
Sbjct: 523 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 582
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP-- 573
AC+ +++G + ++ G + +V L + G ++EA + FE
Sbjct: 583 ACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAY-----LAFEQTE 636
Query: 574 --DAATWGALLGACRLYGKTELA 594
D W AL+ + G E A
Sbjct: 637 AGDNIAWNALVSGFQQSGNNEEA 659
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 208/441 (47%), Gaps = 51/441 (11%)
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR- 324
A ++F+E P + +FTW M+ + +F M +N +G ++ R
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 325 ----MDM-----ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
D+ AR +++ + K+ N +I Y+++G + AR +FD + D SW
Sbjct: 182 GSVAFDVVEQIHARIIYQGLG-KSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWV 240
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+I+G +++ +++RLF +M G F+SVLS C + SLE+G+QLHG ++K+
Sbjct: 241 AMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 300
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
GF + +V NAL+ +Y GS+ A H F + +D +++NT+I G ++ G+G+ A+ LF
Sbjct: 301 GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 360
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ M+ G++PD T+ ++ ACS G + G + ++ G N K +++L +
Sbjct: 361 KRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQ-LHAYTTKLGFASNDKIEGALLNLYAK 419
Query: 556 A----------------------------GRLDEAQN---LMKNMPFE---PDAATWGAL 581
G LD+ +N + + M E P+ T+ ++
Sbjct: 420 CSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 479
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
L C G EL E+ I + + NA + +L ++YA G+ + ++ + V
Sbjct: 480 LKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 539
Query: 641 ----KKVTGYSWLEVQNKVHT 657
+ GY+ +K T
Sbjct: 540 VSWTTMIAGYTQYNFDDKALT 560
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 17/309 (5%)
Query: 305 PEKNTVSWNAMIAGYVQTK-RMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHA 359
P T+ W ++ G ++T +D R+L + N ++ Y G++ A
Sbjct: 65 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-AN 418
+FD MP+ +W +I A S LF M N F+ VL C
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+ ++ +Q+H +++ G V N L+ +Y + G V+ A F+ + KD SW M
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I+G +++ +A+ LF M +GI P +LSAC +E G E + + G
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLG 301
Query: 539 VIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+S Y C +V L G L A+++ NM + DA T+ L+ G EK
Sbjct: 302 F--SSDTYVCNALVSLYFHLGSLISAEHIFSNMS-QRDAVTYNTLINGLSQCG---YGEK 355
Query: 597 AAEVIFEME 605
A E+ M+
Sbjct: 356 AMELFKRMQ 364
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 401 GERLNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G R N +L C SL+ G++LH Q++K+GF+ + LL Y G ++
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F+E+ ++ + +WN MI A LF M + P++ T G+L AC
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+ E ++ G+ ++ ++DL R G +D A+ + + + D ++W
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGL-YLKDHSSWV 240
Query: 580 ALL 582
A++
Sbjct: 241 AMI 243
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 137/336 (40%), Gaps = 63/336 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N +T + + G + A F ++++NA++SG+ +G + A +VF +M
Sbjct: 608 DLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMN 667
Query: 120 QRDLVS---------------------------------------WNVMISGYVRNKSLS 140
+ + S N +IS Y + S+S
Sbjct: 668 REGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSIS 727
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
A+ F + ++ VSWN M++ Y+++G+ A FD+M+ N ++ G+L+A
Sbjct: 728 DAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 787
Query: 197 QNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G +++ FES ++ + ++ + L AK MP+ D + W
Sbjct: 788 HIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVW 847
Query: 251 NTMITGYA--QNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
T+++ +N + E A L E P +D T+ + + Y K D + M E
Sbjct: 848 RTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVCRKWDARDLTRQKMKE 906
Query: 307 KNT-----VSW----NAMIAGYVQTKRMDMARELFE 333
K SW N++ + YV + +A E+ E
Sbjct: 907 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 942
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 281/749 (37%), Positives = 426/749 (56%), Gaps = 69/749 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+A++SG+ G D A+ +F+QM R++VS N ++ G V+ K AA +F M +D+V
Sbjct: 794 SALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLV 851
Query: 156 SWNT-----MLSGYAQNGYADAARR--------IFDRMLEKNEISW-NGLLAAYVQNGRI 201
N+ +LS +++ + RR + L N+++ NGL+ Y ++G I
Sbjct: 852 GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAI 911
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN----TMITGY 257
+AC +FE + VSWNSL+ G + + DA F RM + N + ++
Sbjct: 912 ADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSC 971
Query: 258 AQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
A ++ +++ + DV A+++ Y + G E +F MPE + VSWN
Sbjct: 972 ASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWN 1031
Query: 314 AMIAGYVQTKR---------MDMAR--------------------------ELFEAMTCK 338
++I ++ ++M R A+ K
Sbjct: 1032 SVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK 1091
Query: 339 -----NVASWNTMITGYAQSGEITHARNLFDRMPQ-HDCISWAAIIAGYAQSGYSEDSLR 392
+ A N +++ Y + GE+ +F RM + D +SW ++I+GY + ++
Sbjct: 1092 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMD 1151
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
L M + G+RL+ F +VLS CA++A+LE G ++H ++ E+ VG+AL+ MY
Sbjct: 1152 LVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYS 1211
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT-MV 511
KCG ++ A FE + ++V SWN+MI+GYARHG G+ AL LF M G PD + ++
Sbjct: 1212 KCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLL 1271
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+LSACSH G VE+G E+F SM+ Y + P +H++CMVDLLGRAG+LDE + + +MP
Sbjct: 1272 GVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPM 1331
Query: 572 EPDAATWGALLGAC-RLYGK-TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
+P+ W +LGAC R G+ TEL +AAE++ E+EP+NA YVLL+N+YA+ +W DV+
Sbjct: 1332 KPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVA 1391
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
K R M++ VKK G SW+ +++ VH F GD LHPEKD IY L EL K++ G++
Sbjct: 1392 KARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIP 1451
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
TK L D+ E KE +L YHSEK+AVA+ +L+ + PIR+MKNLRVC DCH+A +IS
Sbjct: 1452 QTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYIS 1510
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KIVGR I+LRD+NRFHHF G CSCGDYW
Sbjct: 1511 KIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 153/606 (25%), Positives = 268/606 (44%), Gaps = 98/606 (16%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I ++R G SA +F+ M R+ V++ +ISGY NG+ D A F RD+V
Sbjct: 583 NTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF-----RDMV 637
Query: 125 SWNVMISGYVRNKSLSAAR-----------NLFEMMPK----RDVVSWNTMLSGYAQN-G 168
+ + Y +L A + + ++ K DVV N ++S Y
Sbjct: 638 RAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLD 697
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
A+ AR +FDR+ +N ISWN +++ Y + G A LF S ++
Sbjct: 698 SANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSS----------------MQ 741
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA------QRLFEEAPVKDVFTWT 282
++ LG F P +E ++ ++IT + R+ + ++D++ +
Sbjct: 742 KEGLG-----FSFKP--NEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGS 794
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------- 335
A+VSG+ + G D+A+ IF+ M +N VS N ++ G V+ K+ + A ++F M
Sbjct: 795 ALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGIN 854
Query: 336 ------------------------------------TCKNVASWNTMITGYAQSGEITHA 359
VA N ++ YA+SG I A
Sbjct: 855 SDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADA 914
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
++F+ M + D +SW ++I+G Q+ SED+ F+ M+R G + S LS+CA+L
Sbjct: 915 CSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASL 974
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+ LG+Q+H +K+G + V NALL +Y + G E F + + D +SWN++I
Sbjct: 975 GWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI 1034
Query: 480 AGYA-RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ A+ F M G +T + ILSA S L E + +++ Y
Sbjct: 1035 GALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ-IHALVLKYC 1093
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ ++ ++ G+ G ++E + + M D +W +++ Y EL KA
Sbjct: 1094 LSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG---YIHNELLHKAM 1150
Query: 599 EVIFEM 604
++++ M
Sbjct: 1151 DLVWFM 1156
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 180/413 (43%), Gaps = 50/413 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN-AMIS--------GYLLNGQ--- 107
D WN I+ +N C + A F M R S+ N +IS G+++ G+
Sbjct: 925 DSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIH 984
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
D + D D+ N +++ Y + +F +MP+ D VSWN+++ + +
Sbjct: 985 CDGLKLGLDT----DVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDS 1040
Query: 168 -GYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVV 217
A + F M+ + +++ +L+A V + + E ++ + + +
Sbjct: 1041 EASVSQAVKYFLEMMRGGWGLSRVTFINILSA-VSSLSLHEVSHQIHALVLKYCLSDDTA 1099
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMITGYAQNNYLAEAQRL----FEE 272
N+L+ + K + + + IF RM RDEVSWN+MI+GY N L +A L ++
Sbjct: 1100 IGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 1159
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
D FT+ ++S ++ + A E + V +A++ Y + R+D A
Sbjct: 1160 GQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYA 1219
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM-----PQHDCISWAAIIAGYAQ 383
FE M +NV SWN+MI+GYA+ G A LF RM P +++ +
Sbjct: 1220 SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSH 1279
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
G+ E+ F K E SP S +L LG+ G+L +VG
Sbjct: 1280 VGFVEEGFEHF---KSMSEVYRLSPRVEHFSCMVDL----LGRA--GKLDEVG 1323
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 202/443 (45%), Gaps = 85/443 (19%)
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
++ ++I Y + EA+ L ++ V ++F +++ YV+ G + A+ +FD M
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------------------------CK- 338
+N V+W +I+GY Q + D A F M CK
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665
Query: 339 ---------------NVASWNTMITGYAQSGEITH-ARNLFDRMPQHDCISWAAIIAGYA 382
+V N +I+ Y + + AR++FDR+ + ISW +II+ Y+
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELG----KQLHGQLVK 434
+ G + LF M++ G + P F S+++ A +S++ G +Q+ ++ K
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLIT--AACSSVDFGLCVLEQMLARVEK 783
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
GF +VG+AL+ + + G ++A + FE++ ++V+S N ++ G + G+ A +
Sbjct: 784 SGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 843
Query: 495 FESMK-TVGIKPDDITMVGILSACSHTGLVE----KGTEYF-----YSMNRDYGVIPNSK 544
F MK VGI D + V +LSA S ++E KG E +N + I N
Sbjct: 844 FHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNG- 900
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+V++ ++G + +A ++ + M E D+ +W +L+ + E +E AAE M
Sbjct: 901 ----LVNMYAKSGAIADACSVFELM-VEKDSVSWNSLISG---LDQNECSEDAAESFLRM 952
Query: 605 E-----PENAGMYVLLSNLYAAS 622
P N + L+S L + +
Sbjct: 953 RRTGSMPSN---FTLISTLSSCA 972
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 149/354 (42%), Gaps = 68/354 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV--F 115
D D+ N + + GC L VF+ MP VS+N++I G L + + ++ V F
Sbjct: 993 DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI-GALSDSEASVSQAVKYF 1051
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK-----------RDVVSWNTMLSGY 164
+M + W + ++ S ++ +L E+ + D N +LS Y
Sbjct: 1052 LEMMRG---GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCY 1108
Query: 165 AQNGYADAARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLF--------------- 208
+ G + +IF RM E ++E+SWN +++ Y+ N + +A L
Sbjct: 1109 GKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTF 1168
Query: 209 -------ESKANWE-----------------VVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
S A E VV ++L+ + K R+ A F+ MP+
Sbjct: 1169 ATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPL 1228
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
R+ SWN+MI+GYA++ + +A +LF + P V ++S G V+E
Sbjct: 1229 RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFE 1288
Query: 300 IFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
F +M E +S ++ M+ + ++D + +M K NV W T++
Sbjct: 1289 HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 1342
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 158/417 (37%), Gaps = 72/417 (17%)
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
GYV + I+D + N I QT +D+ EL + + S+N+
Sbjct: 433 GYVYESMFYNKKRIYDPVDYACIDETNFWIXDEDQTXELDV-EELENFLYEEGRISYNST 491
Query: 347 --ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
T + S LF + + C + + ++ S + LF + + +
Sbjct: 492 PTFTTFTASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLI 551
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
NR +C + E ++LH Q +K GF F+ N L+ +Y + G + A F
Sbjct: 552 NRYQ-----GSCCS----EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLF 602
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT---- 520
+E+ ++++++W +I+GY ++G +A F M G P+ L AC +
Sbjct: 603 DEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSG 662
Query: 521 --------GLVEKGTEY-----------------FYSMNRDYGV-----IPNSKHYTCMV 550
GL+ K T Y S N V I NS + ++
Sbjct: 663 CKLGVQIHGLISK-TRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSII 721
Query: 551 DLLGRAGRLDEAQNLMKNM-------PFEPDAATWGALL-GACRL--YGKTELAEKAAEV 600
+ R G A +L +M F+P+ T+G+L+ AC +G L + A V
Sbjct: 722 SVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARV 781
Query: 601 IFEMEPENAGMYVLLSNLYAAS------GRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
E +G L +LY S R+G + GV+ V + L V
Sbjct: 782 ------EKSG---FLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMV 829
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPR-RSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-- 121
N ++ + + G + +F M R VS+N+MISGY+ N L A + M Q+
Sbjct: 1102 NALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQ 1161
Query: 122 -------------------------------------DLVSWNVMISGYVRNKSLSAARN 144
D+V + ++ Y + + A
Sbjct: 1162 RLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASR 1221
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE-----ISWNGLLAAYVQNG 199
FE+MP R+V SWN+M+SGYA++G+ + A ++F RM+ + G+L+A G
Sbjct: 1222 FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVG 1281
Query: 200 RIEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV-SWNTM 253
+EE F+S + + V ++ ++ + +L + + MP++ V W T+
Sbjct: 1282 FVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTV 1341
Query: 254 ITGYAQNN 261
+ + N
Sbjct: 1342 LGACCRAN 1349
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/638 (37%), Positives = 382/638 (59%), Gaps = 23/638 (3%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+RQ N ++ +R G +A +F+++P RS V++N+ ++ + AR F MP
Sbjct: 30 VRQHNRSLVALLRRGRLAAARRLFDALPARSVVTWNSFLAALARGRDVAAARAFFASMPV 89
Query: 121 RDLVSWNVMISGYVRN---KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
RD VSWN +++ Y R+ + L+AAR LF+ MP+RD V+WNT+L Y + G A ++F
Sbjct: 90 RDAVSWNTLLAAYSRSLNSEHLAAARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLF 149
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
D M ++N SWN ++ + G++ +A +F++ + S +L+ GF+K RL +A+
Sbjct: 150 DEMPQRNVASWNTMVTGFFSAGQVNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEE 209
Query: 238 IFD---RMPVRDEV--SWNTMITGYAQNNYLAEAQRLFEEAP--------------VKDV 278
+ R+ DE ++NT+I Y Q +++A+RLF+ P ++V
Sbjct: 210 LLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNV 269
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+W +M++ Y++ G V AR IF+ MP+K+ VSWN MIAGY + M+ A +LF M
Sbjct: 270 VSWNSMMTCYIRTGDVCSAREIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDP 329
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
++ SWN +I G+ Q G++ HAR FDRMP+ ISW +I+GY Q+G+ + ++ LF +M
Sbjct: 330 DIVSWNLIIRGFTQKGDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKML 389
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G +R F+SVL+ CA+L L LG QLH QL++ F NAL+ MY + G++
Sbjct: 390 EAGGTPDRHTFSSVLAACASLPMLRLGAQLH-QLIEKSFLPDTATSNALMTMYSRGGALT 448
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
+A F+++ KD++SWN +I GY HG +AL LFE M++ + P IT + +LSAC
Sbjct: 449 DAEAIFKQMPQKDLVSWNALIGGYEHHGCATEALQLFEDMRSARVMPTHITFISLLSACG 508
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
+ GLV +G F +M +Y + +HY +V+L+GR G+LD+A ++ +MP PD + W
Sbjct: 509 NAGLVSEGWMVFDTMIHEYSIAARIEHYAALVNLIGRHGQLDDALEVINSMPIAPDRSVW 568
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
GA LGAC LA AA+ + +++PE++ YVL+ NL+A GRWG S VR +M +
Sbjct: 569 GAFLGACTAKKNELLAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQ 628
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
G+ K GYSW+++ +KVH F GDT HP I++ L+
Sbjct: 629 GIHKHPGYSWIDLHDKVHVFISGDTSHPLTQEIFSVLK 666
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 210/454 (46%), Gaps = 100/454 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN + ++R G A +F+ MP+R+ S+N M++G+ GQ++ A +FD MP
Sbjct: 125 DAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNKALDMFDAMP 184
Query: 120 QRDLVSWNVMISGYVRNKSL------------------------------------SAAR 143
+D S ++SG+++N L S AR
Sbjct: 185 VKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDAR 244
Query: 144 NLFEMMPK--------------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
LF+M+P+ R+VVSWN+M++ Y + G +AR IF+ M +K+ +SWN
Sbjct: 245 RLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIFNEMPDKDLVSWN 304
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
++A Y + +EEA LF + ++VSWN ++ GF ++ + A+ FDRMP R +S
Sbjct: 305 TMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARGFFDRMPERGTIS 364
Query: 250 WNTMITGYAQNNYL--------------------------------------AEAQRLFE 271
WNTMI+GY QN + A+ +L E
Sbjct: 365 WNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACASLPMLRLGAQLHQLIE 424
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
++ + D T A+++ Y + G + +A IF MP+K+ VSWNA+I GY A +L
Sbjct: 425 KSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGYEHHGCATEALQL 484
Query: 332 FEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYA 382
FE M V ++ ++++ +G ++ +FD M I+ +AA++
Sbjct: 485 FEDMRSARVMPTHITFISLLSACGNAGLVSEGWMVFDTMIHEYSIAARIEHYAALVNLIG 544
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+ G +D+L + M + RS + + L C
Sbjct: 545 RHGQLDDALEVINSMPIAPD---RSVWGAFLGAC 575
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ WN I + + + A +F MP VS+N +I G+ G ++ AR FD+
Sbjct: 297 DKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARGFFDR 356
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNG--- 168
MP+R +SWN MISGY +N A LF M P R S ++L+ A
Sbjct: 357 MPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFS--SVLAACASLPMLR 414
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
++ ++ + + N L+ Y + G + +A +F+ ++VSWN+L+GG+
Sbjct: 415 LGAQLHQLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGYEH 474
Query: 229 QKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVF 279
+A +F+ M + +++ ++++ ++E +F E + +
Sbjct: 475 HGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGLVSEGWMVFDTMIHEYSIAARIE 534
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+ A+V+ ++G++D+A + ++MP + W A + K EL M K
Sbjct: 535 HYAALVNLIGRHGQLDDALEVINSMPIAPDRSVWGAFLGACTAKK-----NELLAHMAAK 589
Query: 339 NVA 341
++
Sbjct: 590 ALS 592
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/733 (36%), Positives = 408/733 (55%), Gaps = 57/733 (7%)
Query: 102 YLLNGQLDPARQVFDQ-MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV----S 156
Y+ G L R++FD + + WN+M+S Y + + LF+ M K + +
Sbjct: 496 YVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYT 555
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKNEISWN----GLLAAYVQNGRIEEACMLFESKA 212
++ +L +A G +RI + + S+N L+A Y ++G ++ A LF+
Sbjct: 556 FSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELG 615
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV---------------------------- 244
+ +VVSWNS++ G V A F +M +
Sbjct: 616 DRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRA 675
Query: 245 -----------RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
R+ + NT++ Y++ L +A + FE+ K V +WT++++ YV+ G
Sbjct: 676 LHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGL 735
Query: 294 VDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NT 345
D+A +F M K + S +++ +D R++ + N+A N
Sbjct: 736 YDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNA 795
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ YA+ G + A +F ++P D +SW +I GY+++ ++L+LF EM++ R +
Sbjct: 796 LMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKE-SRPD 854
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+L C +LA+LE+G+ +HG +++ G+ + V NAL+ MY KCGS+ A F+
Sbjct: 855 GITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFD 914
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
I +KD+I+W MI+G HG G +A+ F+ M+ GIKPD+IT IL ACSH+GL+ +
Sbjct: 915 MIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNE 974
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G +F SM + + P +HY CMVDLL R G L +A NL++ MP +PDA WGALL C
Sbjct: 975 GWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGC 1034
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R++ ELAEK AE +FE+EP+NAG YVLL+N+YA + +W +V K+R ++ RG+KK G
Sbjct: 1035 RIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPG 1094
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
SW+EVQ K TF DT HP+ I++ L L K+K +G + L + G+ EKE
Sbjct: 1095 CSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEV 1154
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L HSEKLA+A+GIL++P+GR IRV KNLRVC+DCH K +SK R IILRD+NRFH
Sbjct: 1155 ALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFH 1214
Query: 766 HFSGGSCSCGDYW 778
HF G CSC D+W
Sbjct: 1215 HFKDGFCSCRDFW 1227
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 253/537 (47%), Gaps = 41/537 (7%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--ESKANWEVVSWNS 221
Y + Y D R R+ ++ N + + + G + A L K+ ++ +++S
Sbjct: 398 YFLSSYLDVPRS-STRVGAFAKLDENTKICKFCEVGDLRNAVELLRMSQKSELDLNAYSS 456
Query: 222 LMGGFVKQKRLGDAKWIF-----DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
++ + K L + K + + +P+ + V ++ Y L E +R+F+
Sbjct: 457 ILQLCAEHKCLQEGKMVHSVISSNGIPI-EGVLGAKLVFMYVSCGALREGRRIFDHILSD 515
Query: 277 D-VFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMAREL 331
+ VF W M+S Y + G E+ +F M + N+ +++ ++ + R+ + +
Sbjct: 516 NKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI 575
Query: 332 FEAMTCKNVASWNT----MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ S+NT +I Y +SGE+ A LFD + D +SW ++I+G +G+S
Sbjct: 576 HGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFS 635
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+L F++M ++ + + ++ CAN+ SL LG+ LHGQ VK F N L
Sbjct: 636 HSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTL 695
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
L MY KCG++ +A AFE++ K V+SW ++IA Y R G DA+ LF M++ G+ PD
Sbjct: 696 LDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDV 755
Query: 508 ITMVGILSACSHTGLVEKGTEY--FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+M +L AC+ ++KG + + N +P S ++D+ + G ++EA +
Sbjct: 756 YSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVS---NALMDMYAKCGSMEEAYLV 812
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+P + D +W ++G Y K L +A ++ EM+ E+ + ++ L A
Sbjct: 813 FSQIPVK-DIVSWNTMIGG---YSKNSLPNEALKLFAEMQKESRPDGITMACLLPAC--- 865
Query: 626 GDVSKVRLKMRDRGVKKVTGYSW-LEVQNKVHTFSV--GDTLH--------PEKDRI 671
G ++ + + G GYS L V N + V G +H PEKD I
Sbjct: 866 GSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLI 922
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 171/420 (40%), Gaps = 97/420 (23%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVF----------------NSMPRRSSV------- 93
GD D+ WN I+ + NG SAL F NS+ ++V
Sbjct: 615 GDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGR 674
Query: 94 -----------SYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
S M + LL+ G L+ A Q F++M Q+ +VSW +I+ YVR
Sbjct: 675 ALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREG 734
Query: 138 SLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----- 188
A LF M + DV S ++L A D R + + + KN ++
Sbjct: 735 LYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHN-YIRKNNMALCLPVS 793
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----- 243
N L+ Y + G +EEA ++F ++VSWN+++GG+ K +A +F M
Sbjct: 794 NALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRP 853
Query: 244 ----------------------------VRDEVS-----WNTMITGYAQNNYLAEAQRLF 270
+R+ S N +I Y + L A+ LF
Sbjct: 854 DGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLF 913
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMD 326
+ P KD+ TWT M+SG +G +EA F M + + +++ +++ + ++
Sbjct: 914 DMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLN 973
Query: 327 MARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
F +M + + + M+ A++G ++ A NL + MP + D W A++ G
Sbjct: 974 EGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCG 1033
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 178/389 (45%), Gaps = 42/389 (10%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPAR 112
G + W I ++R G D A+ +F M + S +++ LD R
Sbjct: 716 GQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGR 775
Query: 113 QVFDQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
V + + + ++ N ++ Y + S+ A +F +P +D+VSWNTM+ GY++N
Sbjct: 776 DVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNS 835
Query: 169 YADAARRIFDRMLEKNE---ISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWN 220
+ A ++F M +++ I+ LL A ++ GR C+L ++ E+ N
Sbjct: 836 LPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSS-ELHVAN 894
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE---APVK- 276
+L+ +VK L A+ +FD +P +D ++W MI+G + EA F++ A +K
Sbjct: 895 ALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKP 954
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMAREL 331
D T+T+++ +G ++E F++M E + M+ +T + A L
Sbjct: 955 DEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNL 1014
Query: 332 FEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQH------DCISWAAIIAG-YAQ 383
E M K A+ W ++ G I H L +++ +H D + ++A YA+
Sbjct: 1015 IETMPIKPDATIWGALLCGC----RIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAE 1070
Query: 384 SGYSEDSLRLFIEMKRYGER-LNRSPFTS 411
+ E+ +L +R G+R L +SP S
Sbjct: 1071 AEKWEEVKKL---RERIGKRGLKKSPGCS 1096
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 275/793 (34%), Positives = 425/793 (53%), Gaps = 114/793 (14%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMP-- 150
A+++ G L R++ Q+ RD V N +IS Y + SL A+ F+ +P
Sbjct: 12 ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 71
Query: 151 -KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
KRDVV+WN M+S + +NG A A ++F M N + V + +E + E
Sbjct: 72 SKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLE 131
Query: 210 -----------SKANWEVVSWNSLMGGFVKQKRLGDAKWIF----DRMPVRDEVSWNTMI 254
+ E +L+ + K L DA +F D P V+ + MI
Sbjct: 132 DVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMI 191
Query: 255 TGYAQNNYLAEAQRLF-----------------------------------EEA-----P 274
+ QN + E+ RLF E+A
Sbjct: 192 SACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSA 251
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
+D T +++ Y ++ + AR FDA+ + VSWNAM A Y+Q R A LFE
Sbjct: 252 TRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFER 311
Query: 335 MTCK----NVASWNTMITG--------------------------------------YAQ 352
M + +VA++ T +T YA+
Sbjct: 312 MLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAK 371
Query: 353 SGEITHARNLFDRMP--QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL---NRS 407
G + AR +F+R+ + DCI+W +++A Y G +++ LF M+ E+L N+
Sbjct: 372 CGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAME--AEKLVKPNKV 429
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F +VL + S+ G+++H ++V GFE+ + NALL MY KCGS+++A F++
Sbjct: 430 TFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKS 489
Query: 468 VD--KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+DVI+W +++AGYA++G + AL LF +M+ G++P+ IT + L+AC+H G +E+
Sbjct: 490 SSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQ 549
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E M D+G++P SKH++C+VDLLGR GRLDEA+ L++ + D TW ALL AC
Sbjct: 550 GCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDAC 608
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
+ + E E+ AE I +++PE A Y++L+++YAA+GRW + + +R M D+G++ G
Sbjct: 609 KNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPG 668
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
S +EV ++H+FS GD HP+ + IY LE L + +K G+V T LVLHDV +E KE
Sbjct: 669 CSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKER 728
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
+L HSEKLA+A+G++S P+G P+RV+KNLRVC DCH A K ISK+ GR I++RD++R+H
Sbjct: 729 LLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYH 788
Query: 766 HFSGGSCSCGDYW 778
HF+ G+CSCGDYW
Sbjct: 789 HFTSGTCSCGDYW 801
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 219/543 (40%), Gaps = 127/543 (23%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSM-----PRRSSVSY--------------- 95
A D+ WN I+ +RNG AL +F M P +SV++
Sbjct: 71 ASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSL 130
Query: 96 ----------------------NAMISGYLLNGQLDPARQVF----DQMPQRDLVSWNVM 129
A++ Y G LD A +VF D+ P LV+ + M
Sbjct: 131 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAM 190
Query: 130 ISGYVRNK----------------------SLSAARNLFEMMP----------------- 150
IS +N +L + N M+P
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVS 250
Query: 151 -KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
RD V T+L+ YA++ AR FD + + +SWN + AAY+Q+ R EA +LFE
Sbjct: 251 ATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFE 310
Query: 210 ---------SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITG 256
S A + ++ + + Q K I + D N +
Sbjct: 311 RMLLEGVRPSVATF--ITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNM 368
Query: 257 YAQNNYLAEAQRLFEE-APV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNT 309
YA+ LA+A+ +FE +P +D TW +M++ Y +G EA +F AM + N
Sbjct: 369 YAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNK 428
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDR 365
V++ A++ + RE+ + S N ++ YA+ G + A+ +FD+
Sbjct: 429 VTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDK 488
Query: 366 MP--QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
Q D I+W +++AGYAQ G +E +L+LF M++ G R N F S L+ C + LE
Sbjct: 489 SSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLE 548
Query: 424 LGKQL-------HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
G +L HG +V C V + +CG ++EA E DVI+W
Sbjct: 549 QGCELLSGMTPDHG-IVPASKHFSCIVD-----LLGRCGRLDEAEKLLERTSQADVITWM 602
Query: 477 TMI 479
++
Sbjct: 603 ALL 605
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
R N ++++ C+ L +L G+++H Q+ FE +GNAL+ MY KCGS+ +A
Sbjct: 4 RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63
Query: 463 AFEEI---VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI-KPDDITMVGILSACS 518
AF+ + +DV++WN MI+ + R+G ++AL LF M G P+ +T V +L +C
Sbjct: 64 AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCV 123
Query: 519 HTGLVE-KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA-QNLMKNMPFEPDAA 576
GL+ + + G+ + T +VD G+ G LD+A + ++ EP +
Sbjct: 124 EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTS 183
Query: 577 --TWGALLGAC 585
T A++ AC
Sbjct: 184 LVTCSAMISAC 194
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/805 (33%), Positives = 417/805 (51%), Gaps = 105/805 (13%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N+ + + + G A +F+ MPRR S+N ++SGY + + F M
Sbjct: 75 NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDS 134
Query: 119 -----------------------PQRDLVSW-----------NVMISGYVRNKSLSAARN 144
PQ + W ++ +VR + A
Sbjct: 135 LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASR 194
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
LF + + + N+ML+GYA+ D A F+ M E++ +SWN ++AA Q+GR+ EA
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254
Query: 205 CML-------------------FESKANWEVVSW--------------------NSLMGG 225
L + A + W ++L+
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTW 281
+ K +AK +F+ + R+ VSW +I G Q +++ LF + + D F
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 282 TAMVSGYVQNGKVDEAR----MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
++SG + R + + + V N++I+ Y + + A +F +M+
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+++ SW +MIT Y+Q G I AR FD M + I+W A++ Y Q G ED L+++ M
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAM 494
Query: 398 KRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
+ + +P + ++ CA++ + +LG Q+ G VK G V NA + MY K
Sbjct: 495 L---SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSK 551
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG + EA F+ + KDV+SWN MI GY++HG GK A F+ M + G KPD I+ V +
Sbjct: 552 CGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAV 611
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
LS CSH+GLV++G YF M R +G+ P +H++CMVDLLGRAG L EA++L+ MP +P
Sbjct: 612 LSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKP 671
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
A WGALL AC+++G ELAE AA+ +FE++ ++G Y+LL+ +Y+ +G+ D ++VR
Sbjct: 672 TAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRK 731
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
MRD+G+KK GYSW+EV+NKVH F D HP+ I L+EL K+ G+V +
Sbjct: 732 LMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVRT--- 788
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
E + + +HSEKLAVA+GI+S+PA PI +MKNLR+C DCH IK IS +
Sbjct: 789 ------ESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTD 840
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R ++RD RFHHF GSCSCGDYW
Sbjct: 841 REFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 204/467 (43%), Gaps = 87/467 (18%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANW-EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
N LL AY G + +A L + V++ N +M G+ KQ L DA+ +FDRMP RD
Sbjct: 43 NTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 102
Query: 248 VSWNTMITGYAQNNYLAEAQRLF-----------------------------EEAPVKDV 278
SWNT+++GY Q + F E AP
Sbjct: 103 ASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLG 162
Query: 279 FTW-----------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
W TA+V +V+ G VD A +F + N+M+AGY + +D
Sbjct: 163 LFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDH 222
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A E FE M ++V SWN MI +QSG + A
Sbjct: 223 AIEYFEDMAERDVVSWNMMIAALSQSGRVREA---------------------------- 254
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
L L +EM R G RL+ + +TS L+ CA L SL GKQLH ++++ + +V +AL
Sbjct: 255 ---LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASAL 311
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ +Y KCGS +EA F + D++ +SW +I G ++ ++ LF M+ + D
Sbjct: 312 IELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 371
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYG-----VIPNSKHYTCMVDLLGRAGRLDEA 562
+ ++S C + + G + +S+ G V+ NS ++ L + G L A
Sbjct: 372 FALATLISGCFNRMDLCLGRQ-LHSLCLKSGHNRAIVVSNS-----LISLYAKCGDLQNA 425
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
+ + +M E D +W +++ A Y + KA E M+ NA
Sbjct: 426 EFVFSSMS-ERDIVSWTSMITA---YSQIGNIIKAREFFDGMDTRNA 468
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/610 (24%), Positives = 248/610 (40%), Gaps = 110/610 (18%)
Query: 90 RSSVSYNAMISGYLLNGQL---DPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
RS S A+ L+G+L A VF Q N ++ Y +LS AR L
Sbjct: 12 RSCGSRGALAGARALHGRLVTVGLASAVFLQ---------NTLLHAYFSCGALSDARRLL 62
Query: 147 EM-MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
+ + +V++ N M++GYA+ G A +FDRM ++ SWN L++ Y Q R +
Sbjct: 63 RADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGL 122
Query: 206 MLFESKANWEVVSWNSLMGGFV---------------KQKRLGDAKWIFDRMPVRDEVSW 250
F S S +SL F +L W FD D
Sbjct: 123 ETFVSMHR----SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWG--DPDVE 176
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
++ + + Y+ A RLF + +F +M++GY + +D A F+ M E++ V
Sbjct: 177 TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVV 236
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNV-------------------ASW-------- 343
SWN MIA Q+ R+ A L M K V W
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
+ +I YA+ G A+ +F+ + + +SW +I G Q S+
Sbjct: 297 IRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 356
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF +M+ +++ +++S C N L LG+QLH +K G V N+L+ +Y
Sbjct: 357 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 416
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA---------------------------- 483
KCG ++ A F + ++D++SW +MI Y+
Sbjct: 417 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLG 476
Query: 484 ---RHGFGKDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
+HG +D L ++ +M + + PD +T V + C+ G + G + G+
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQ-IIGHTVKAGL 535
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
I N + + + GR+ EAQ L ++ D +W A++ Y + + ++AA+
Sbjct: 536 ILNVSVANAAITMYSKCGRISEAQKLF-DLLNGKDVVSWNAMITG---YSQHGMGKQAAK 591
Query: 600 VIFEMEPENA 609
+M + A
Sbjct: 592 TFDDMLSKGA 601
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 139/604 (23%), Positives = 253/604 (41%), Gaps = 132/604 (21%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
GD D+ + +R G D A +F+ + R + N+M++GY +D A + F+
Sbjct: 171 GDPDVE--TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFE 228
Query: 117 QMPQRDLVSWNVMI-----SGYVR---------------------NKSLSAARNLFEM-- 148
M +RD+VSWN+MI SG VR SL+A LF +
Sbjct: 229 DMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGW 288
Query: 149 -----------MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
+P+ D + ++ YA+ G A+R+F+ + ++N +SW L+ +Q
Sbjct: 289 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348
Query: 198 NGRIEEACMLF---------------------------------------ESKANWEVVS 218
++ LF +S N +V
Sbjct: 349 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 408
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
NSL+ + K L +A+++F M RD VSW +MIT Y+Q + +A+ F+ ++
Sbjct: 409 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNA 468
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VSWNAMIAGYVQTKRMDMARELF- 332
TW AM+ Y+Q+G ++ ++ AM + V++ + G + ++
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528
Query: 333 ---EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+A NV+ N IT Y++ G I+ A+ LFD + D +SW A+I GY+Q G +
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALL 448
+ + F +M G + + + +VLS C++ ++ GK + +V G G + ++
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 648
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
+ + G + EA ++++DK + +KP
Sbjct: 649 DLLGRAGHLTEA----KDLIDK------------------------------MPMKPTAE 674
Query: 509 TMVGILSACSHTG---LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+LSAC G L E ++ + ++ P+S Y + + AG+ D++ +
Sbjct: 675 VWGALLSACKIHGNDELAELAAKHVFELDS-----PDSGSYMLLAKIYSDAGKSDDSAQV 729
Query: 566 MKNM 569
K M
Sbjct: 730 RKLM 733
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 64/355 (18%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVA 67
RQLHS C+ H ++I + S + + Y L+ S + DI W
Sbjct: 391 RQLHSLCLKSGHNRAI--VVSNSLISLYAKCGDLQNAEFVFSSMSER-----DIVSWTSM 443
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLV-S 125
IT + + G A F+ M R+++++NAM+ Y+ +G + +++ M Q+D+
Sbjct: 444 ITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 503
Query: 126 W--------------------------------------NVMISGYVRNKSLSAARNLFE 147
W N I+ Y + +S A+ LF+
Sbjct: 504 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 563
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEE 203
++ +DVVSWN M++GY+Q+G A + FD ML K + IS+ +L+ +G ++E
Sbjct: 564 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 204 ACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG- 256
+ F+ +S ++ ++ + L +AK + D+MP++ W +++
Sbjct: 624 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 683
Query: 257 -YAQNNYLAE--AQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
N+ LAE A+ +FE ++P D ++ + Y GK D++ + M +K
Sbjct: 684 KIHGNDELAELAAKHVFELDSP--DSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK 736
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 46/300 (15%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE-EI 467
L +C + +L + LHG+LV VG + F+ N LL Y CG++ +A +I
Sbjct: 7 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+ +VI+ N M+ GYA+ G DA LF+ M + + M G A G
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFL----DGL 122
Query: 528 EYFYSMNRDYGVIPNSKHYTC-----------------------------------MVDL 552
E F SM+R +PN+ + C +VD+
Sbjct: 123 ETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDM 182
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
R G +D A L + L G +LYG + A E +M + +
Sbjct: 183 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYG----IDHAIEYFEDMAERDVVSW 238
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
++ + SGR + + ++M +GV+ T S L ++ + G LH + R
Sbjct: 239 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 298
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/740 (35%), Positives = 419/740 (56%), Gaps = 61/740 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
N+++ Y G + R+VFD+M RD+VSWN +++GY N+ LF +M
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 150 PKRDVVS---------------------------------WNTMLSGYAQNGYADAARRI 176
P VS N+++S +++G AR +
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV-------SWNSLMGGFVKQ 229
FD M K+ +SWN ++A +V NG+ EA FE+ N ++ ++ S++
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEA---FETFNNMQLAGAKPTHATFASVIKSCASL 317
Query: 230 KRLGDAKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAP-VKDVFTWTA 283
K LG + + ++ +S N ++ + + +A LF V+ V +WTA
Sbjct: 318 KELGLVR-VLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTA 376
Query: 284 MVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
M+SGY+QNG D+A +F M + N +++ ++ ++ E+ + K+
Sbjct: 377 MISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKS 436
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+ ++ + + G I+ A +F+ + D I+W+A++AGYAQ+G +E++ ++F ++ R
Sbjct: 437 SSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTR 496
Query: 400 YGERLNRSPFTSVLSTC-ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G + N F S+++ C A AS+E GKQ H +K+ V ++L+ +Y K G++E
Sbjct: 497 EGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIE 556
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A+ F+ ++D++SWN+MI+GYA+HG K AL +FE M+ ++ D IT +G++SAC+
Sbjct: 557 SAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACA 616
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H GLV KG YF M D+ + P +HY+CM+DL RAG L +A +++ MPF P A W
Sbjct: 617 HAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVW 676
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
+L A R++ EL + AAE I +EP+++ YVLLSN+YAA+G W + VR M R
Sbjct: 677 RIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKR 736
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
VKK GYSW+EV+NK ++F GD HP D IY+ L EL +L+ G+ T V HD+
Sbjct: 737 RVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDI 796
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+E+KE +L +HSE+LA+A+G+++ P++++KNLRVC DCH+ IK +S + R I++
Sbjct: 797 EDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVV 856
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD+NRFHHF GG CSCGDYW
Sbjct: 857 RDSNRFHHFKGGLCSCGDYW 876
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 250/567 (44%), Gaps = 105/567 (18%)
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWN 189
+R+ A+ LF+ P RD+ N +L Y++ A +F + L + + +
Sbjct: 47 LRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMS 106
Query: 190 GLLA--AYVQNGRIEEA--CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+L+ A NG + E C + + NSL+ + K + D + +FD M R
Sbjct: 107 CVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDR 166
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVD------ 295
D VSWN+++TGY+ N + + LF V+ D +T + +++ G V
Sbjct: 167 DVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIH 226
Query: 296 -----------------------------EARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+AR++FD M K++VSWN+MIAG+V +
Sbjct: 227 ALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDL 286
Query: 327 MARELFEAMT-------------------------------CKNVAS--------WNTMI 347
A E F M CK + S ++
Sbjct: 287 EAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALM 346
Query: 348 TGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+ EI A +LF M +SW A+I+GY Q+G ++ ++ LF M+R G + N
Sbjct: 347 VALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNH 406
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
++++L+ + ++H +++K +E VG ALL + K G++ +A FE
Sbjct: 407 FTYSTILT----VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFEL 462
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH-TGLVEK 525
I KDVI+W+ M+AGYA+ G ++A +F + GIKP++ T I++AC+ T VE+
Sbjct: 463 IETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQ 522
Query: 526 GTEYFYSMNRDYGVIPNSKHYTC----MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
G ++ Y + + C +V L + G ++ A + K E D +W ++
Sbjct: 523 GKQF-----HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSM 576
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPEN 608
+ +G+ A+KA EV EM+ N
Sbjct: 577 ISGYAQHGQ---AKKALEVFEEMQKRN 600
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 174/362 (48%), Gaps = 46/362 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
D WN I H+ NG A FN+M + + ++ ++I +L R +
Sbjct: 268 DSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLH 327
Query: 116 DQMPQRDL-VSWNVMISGYV---RNKSLSAARNLFEMMPK-RDVVSWNTMLSGYAQNGYA 170
+ + L + NV+ + V + K + A +LF +M + VVSW M+SGY QNG
Sbjct: 328 CKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDT 387
Query: 171 DAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN------ 220
D A +F M ++ N +++ +L VQ+ +F S+ + EV+ N
Sbjct: 388 DQAVNLFSLMRREGVKPNHFTYSTILT--VQHA-------VFISEIHAEVIKTNYEKSSS 438
Query: 221 ---SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+L+ FVK + DA +F+ + +D ++W+ M+ GYAQ EA ++F + +
Sbjct: 439 VGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREG 498
Query: 278 V----FTWTAMV------SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ FT+ +++ + V+ GK A I + VS ++++ Y + ++
Sbjct: 499 IKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVS-SSLVTLYAKRGNIES 557
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQ 383
A E+F+ +++ SWN+MI+GYAQ G+ A +F+ M + D I++ +I+ A
Sbjct: 558 AHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAH 617
Query: 384 SG 385
+G
Sbjct: 618 AG 619
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 34/307 (11%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
G + W I+ +++NG D A+++F S+ RR V N +L Q VF
Sbjct: 367 GVQSVVSWTAMISGYLQNGDTDQAVNLF-SLMRREGVKPNHFTYSTILTVQ----HAVFI 421
Query: 117 QMPQRDLVSWN---------VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+++ N ++ +V+ ++S A +FE++ +DV++W+ ML+GYAQ
Sbjct: 422 SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQA 481
Query: 168 GYADAARRIFDRM----LEKNEISWNGLL------AAYVQNGRIEEACMLFESKANWEVV 217
G + A +IF ++ ++ NE ++ ++ A V+ G+ A + N V
Sbjct: 482 GETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCV 541
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK- 276
S +SL+ + K+ + A IF R RD VSWN+MI+GYAQ+ +A +FEE +
Sbjct: 542 S-SSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRN 600
Query: 277 ---DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMA 328
D T+ ++S G V + + F+ M + ++ ++ MI Y + + A
Sbjct: 601 LEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKA 660
Query: 329 RELFEAM 335
++ M
Sbjct: 661 MDIINGM 667
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/698 (37%), Positives = 400/698 (57%), Gaps = 29/698 (4%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA-------ARNLFEMMPKRDVVSWNTM 160
L R + QM + L + N +S + LS A ++FE + + +++ WNTM
Sbjct: 15 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTM 74
Query: 161 LSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML----FESKA 212
G+A + +A ++ M+ N ++ LL + ++ E + +
Sbjct: 75 FRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGY 134
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ ++ SL+ +V+ RL DA+ +FD+ RD VS+ +ITGYA Y+A AQ++F+E
Sbjct: 135 DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDE 194
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMD 326
P+KDV +W AM+SGY + G EA +F M P+++T+ ++++ Q+ ++
Sbjct: 195 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMV--SVVSACAQSASIE 252
Query: 327 MARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+ R++ + N+ N +I Y + GE+ A LF+ + D ISW +I GY
Sbjct: 253 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 312
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAG 440
+++L LF EM R GE N S+L CA+L ++E+G+ +H + K G
Sbjct: 313 HMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANA 372
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+L+ MY KCG +E A F+ I+++ + SWN MI G+A HG A +F M+
Sbjct: 373 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
I+PDDIT VG+LSACSH+G+++ G F SM DY + P +HY CM+DLLG +G
Sbjct: 433 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA+ ++ M EPD W +LL AC++Y EL E A+ + ++EP+N G YVLLSN+YA
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYA 552
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
+GRW +V+K+R + D+G+KKV G S +E+ + VH F +GD HP IY LEE+E
Sbjct: 553 TAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
L++ GFV T VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +
Sbjct: 613 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 672
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH A K ISKI R II RD RFHHF G CSC DYW
Sbjct: 673 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 192/404 (47%), Gaps = 71/404 (17%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+ ++IS Y+ NG+L+ AR+VFDQ RD+VS+ +I+GY +++A+ +F+ +P +DV
Sbjct: 141 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 200
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKN---------------------EI-----SW 188
VSWN M+SGYA+ G A +F M++ N E+ SW
Sbjct: 201 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 260
Query: 189 -------------NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
N L+ Y++ G +E AC LFE + +V+SWN+L+GG+ +A
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320
Query: 236 KWIFDRMPVRDEVSWN--TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFTW----TAM 284
+F M +R S N TM++ +L + ++ +K V T++
Sbjct: 321 LLLFQEM-LRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSL 379
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV---- 340
+ Y + G ++ A+ +FD++ ++ SWNAMI G+ R + A ++F M +
Sbjct: 380 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 439
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFI 395
++ +++ + SG + R++F M + I+ + +I SG LF
Sbjct: 440 ITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG-------LFK 492
Query: 396 EMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
E + + P + S+L C A++ELG+ L+K+
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKI 536
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 40/235 (17%)
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL---VMYCKCGSVEEAYHAF 464
P S+L C L SL + +H Q++K G + + L+ V+ + A F
Sbjct: 4 PSLSLLHNCKTLQSL---RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVF 60
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E I + +++ WNTM G+A AL L+ M ++G+ P+ T +L +C+ +
Sbjct: 61 ETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFR 120
Query: 525 KGTEY------------------FYSMNRDYG-------VIPNSKH-----YTCMVDLLG 554
+G + SM G V S H YT ++
Sbjct: 121 EGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYA 180
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
G + AQ + +P + D +W A++ Y +T ++A E+ EM N
Sbjct: 181 SKGYIASAQKMFDEIPIK-DVVSWNAMISG---YAETGNNKEALELFKEMMKTNV 231
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/664 (37%), Positives = 377/664 (56%), Gaps = 38/664 (5%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQ 197
AR LF+ +P+ ++ WNTM+ GY++ + ++ ML + + ++ L + +
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 198 NGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
+ +E L + + V +L+ ++ +L A+ +FD P D ++WN +
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 211
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM-------------------VSGYVQNGKV 294
I+ Y + E++RLF K V T V YV+N KV
Sbjct: 212 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 271
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
E N V NAMI Y MD A +F +M +++ SW T+++G+ G
Sbjct: 272 -----------ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLG 320
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
EI ARN FD+MP+ D +SW A+I GY +S +++L LF M+ + + SVL+
Sbjct: 321 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 380
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA+L +LELG+ + + + + FV NAL+ MY KCG V++A F E+ +D +
Sbjct: 381 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 440
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W MI G A +G G+ AL +F +M I PD+IT +G+LSAC+HTGLV+KG +YF M
Sbjct: 441 WTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMT 500
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+G+ PN HY C+VDLL RAGRL EA +++NMP + ++ WGALL CR+Y ++++A
Sbjct: 501 SQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMA 560
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
E + I E+EP+N +YVLL N+YAA RW D+ ++R M D+G+KK G S +E+ +
Sbjct: 561 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGR 620
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
VH F GD HP+ I A L+++ LK G+ V D+ EE+KE+ + HSEKL
Sbjct: 621 VHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKL 680
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+G+++ P G IR+ KNLR+C DCHN K +SK+ R +I+RD RFHHF G CSC
Sbjct: 681 AIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSC 740
Query: 775 GDYW 778
DYW
Sbjct: 741 KDYW 744
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 216/504 (42%), Gaps = 94/504 (18%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTML 161
G AR++FD++P+ +L WN MI GY R +L+ M +R D ++ +
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 162 SGYAQN-----------------------------------GYADAARRIFDRMLEKNEI 186
G+ ++ G D AR +FD + + I
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAK----WI 238
+WN +++AY + G+ EE+ LF + +V V+ ++ K K L K ++
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
+ + V N MI YA + A +F +D+ +WT +VSG+ G++D AR
Sbjct: 267 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 326
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV------------------ 340
FD MPEK+ VSW AMI GY+++ R A ELF M NV
Sbjct: 327 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 386
Query: 341 ----ASW-----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
W N +I Y + G++ A ++F M Q D +W A+I
Sbjct: 387 ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIV 446
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFE 438
G A +G+ E +L +F M + + + VLS C + ++ G++ ++ + G E
Sbjct: 447 GLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 506
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFES 497
L+ + + G ++EAY E + + + I W ++AG + A M+ +
Sbjct: 507 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 566
Query: 498 MKTVGIKPDD----ITMVGILSAC 517
+ + ++PD+ + + I +AC
Sbjct: 567 I--LELEPDNGAVYVLLCNIYAAC 588
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 186/401 (46%), Gaps = 65/401 (16%)
Query: 63 QWNVAITT-----HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
Q+NV + T ++ G D+A VF+ P+ +++N +IS Y G+ + +R++F
Sbjct: 171 QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLV 230
Query: 118 MPQR---------------------------------------DLVSWNVMISGYVRNKS 138
M + +LV N MI Y
Sbjct: 231 MEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGE 290
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ +A +F M RD++SW T++SG+ G D AR FD+M EK+ +SW ++ Y+++
Sbjct: 291 MDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 350
Query: 199 GRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWI---FDRMPVRDEV-SW 250
R +EA LF + V + S++ L +WI DR +++++
Sbjct: 351 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 410
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE---- 306
N +I Y + + +A+ +F E +D FTWTAM+ G NG ++A +F M +
Sbjct: 411 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 470
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARN 361
+ +++ +++ T +D R+ F MT + N+A + ++ A++G + A
Sbjct: 471 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 530
Query: 362 LFDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMK 398
+ + MP + + I W A++AG Y +S +E ++ +E++
Sbjct: 531 VIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 571
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 161/340 (47%), Gaps = 18/340 (5%)
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G+ +AR LFD +P+ + W +I GY++ + + + L++EM R G + +R F
Sbjct: 85 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 144
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+ +LE G+QLHG ++K G + FV AL+ MY CG ++ A F+ D
Sbjct: 145 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 204
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
VI+WN +I+ Y + G +++ LF M+ + P +T+V +LSACS + G + +
Sbjct: 205 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKK-VH 263
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
S ++ V N M+D+ G +D A + ++M D +W ++ G+
Sbjct: 264 SYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGEI 322
Query: 592 ELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSW 648
++A F+ PE + + + + Y S R+ + ++ M+ VK + T S
Sbjct: 323 DVARN----YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSV 378
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
L + +G+ + DR K+K D FV
Sbjct: 379 LTACAHLGALELGEWIRTYIDR---------NKIKNDLFV 409
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 49/246 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI W ++ G D A + F+ MP + VS+ AMI GY+ + + A ++F M
Sbjct: 305 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 364
Query: 120 ---------------------------------------QRDLVSWNVMISGYVRNKSLS 140
+ DL N +I Y + +
Sbjct: 365 ATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVD 424
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYV 196
A ++F M +RD +W M+ G A NG+ + A +F ML+ +EI++ G+L+A
Sbjct: 425 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 484
Query: 197 QNGRIEEACMLF---ESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G +++ F S+ E + + L+ + RL +A + + MP++ + + W
Sbjct: 485 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 544
Query: 251 NTMITG 256
++ G
Sbjct: 545 GALLAG 550
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/664 (37%), Positives = 377/664 (56%), Gaps = 38/664 (5%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQ 197
AR LF+ +P+ ++ WNTM+ GY++ + ++ ML + + ++ L + +
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 198 NGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
+ +E L + + V +L+ ++ +L A+ +FD P D ++WN +
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 190
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM-------------------VSGYVQNGKV 294
I+ Y + E++RLF K V T V YV+N KV
Sbjct: 191 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 250
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
E N V NAMI Y MD A +F +M +++ SW T+++G+ G
Sbjct: 251 -----------ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLG 299
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
EI ARN FD+MP+ D +SW A+I GY +S +++L LF M+ + + SVL+
Sbjct: 300 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 359
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA+L +LELG+ + + + + FV NAL+ MY KCG V++A F E+ +D +
Sbjct: 360 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 419
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W MI G A +G G+ AL +F +M I PD+IT +G+LSAC+HTGLV+KG +YF M
Sbjct: 420 WTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMT 479
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+G+ PN HY C+VDLL RAGRL EA +++NMP + ++ WGALL CR+Y ++++A
Sbjct: 480 SQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMA 539
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
E + I E+EP+N +YVLL N+YAA RW D+ ++R M D+G+KK G S +E+ +
Sbjct: 540 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGR 599
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
VH F GD HP+ I A L+++ LK G+ V D+ EE+KE+ + HSEKL
Sbjct: 600 VHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKL 659
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+G+++ P G IR+ KNLR+C DCHN K +SK+ R +I+RD RFHHF G CSC
Sbjct: 660 AIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSC 719
Query: 775 GDYW 778
DYW
Sbjct: 720 KDYW 723
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 216/504 (42%), Gaps = 94/504 (18%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTML 161
G AR++FD++P+ +L WN MI GY R +L+ M +R D ++ +
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 162 SGYAQN-----------------------------------GYADAARRIFDRMLEKNEI 186
G+ ++ G D AR +FD + + I
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAK----WI 238
+WN +++AY + G+ EE+ LF + +V V+ ++ K K L K ++
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
+ + V N MI YA + A +F +D+ +WT +VSG+ G++D AR
Sbjct: 246 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 305
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV------------------ 340
FD MPEK+ VSW AMI GY+++ R A ELF M NV
Sbjct: 306 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 365
Query: 341 ----ASW-----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
W N +I Y + G++ A ++F M Q D +W A+I
Sbjct: 366 ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIV 425
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFE 438
G A +G+ E +L +F M + + + VLS C + ++ G++ ++ + G E
Sbjct: 426 GLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 485
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFES 497
L+ + + G ++EAY E + + + I W ++AG + A M+ +
Sbjct: 486 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 545
Query: 498 MKTVGIKPDD----ITMVGILSAC 517
+ + ++PD+ + + I +AC
Sbjct: 546 I--LELEPDNGAVYVLLCNIYAAC 567
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 186/401 (46%), Gaps = 65/401 (16%)
Query: 63 QWNVAITT-----HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
Q+NV + T ++ G D+A VF+ P+ +++N +IS Y G+ + +R++F
Sbjct: 150 QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLV 209
Query: 118 MPQR---------------------------------------DLVSWNVMISGYVRNKS 138
M + +LV N MI Y
Sbjct: 210 MEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGE 269
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ +A +F M RD++SW T++SG+ G D AR FD+M EK+ +SW ++ Y+++
Sbjct: 270 MDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 329
Query: 199 GRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWI---FDRMPVRDEV-SW 250
R +EA LF + V + S++ L +WI DR +++++
Sbjct: 330 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 389
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE---- 306
N +I Y + + +A+ +F E +D FTWTAM+ G NG ++A +F M +
Sbjct: 390 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 449
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARN 361
+ +++ +++ T +D R+ F MT + N+A + ++ A++G + A
Sbjct: 450 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 509
Query: 362 LFDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMK 398
+ + MP + + I W A++AG Y +S +E ++ +E++
Sbjct: 510 VIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 550
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 161/340 (47%), Gaps = 18/340 (5%)
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G+ +AR LFD +P+ + W +I GY++ + + + L++EM R G + +R F
Sbjct: 64 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 123
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+ +LE G+QLHG ++K G + FV AL+ MY CG ++ A F+ D
Sbjct: 124 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 183
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
VI+WN +I+ Y + G +++ LF M+ + P +T+V +LSACS + G + +
Sbjct: 184 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKK-VH 242
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
S ++ V N M+D+ G +D A + ++M D +W ++ G+
Sbjct: 243 SYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGEI 301
Query: 592 ELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSW 648
++A F+ PE + + + + Y S R+ + ++ M+ VK + T S
Sbjct: 302 DVARN----YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSV 357
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
L + +G+ + DR K+K D FV
Sbjct: 358 LTACAHLGALELGEWIRTYIDR---------NKIKNDLFV 388
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 49/246 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI W ++ G D A + F+ MP + VS+ AMI GY+ + + A ++F M
Sbjct: 284 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 343
Query: 120 ---------------------------------------QRDLVSWNVMISGYVRNKSLS 140
+ DL N +I Y + +
Sbjct: 344 ATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVD 403
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYV 196
A ++F M +RD +W M+ G A NG+ + A +F ML+ +EI++ G+L+A
Sbjct: 404 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 463
Query: 197 QNGRIEEACMLF---ESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G +++ F S+ E + + L+ + RL +A + + MP++ + + W
Sbjct: 464 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 523
Query: 251 NTMITG 256
++ G
Sbjct: 524 GALLAG 529
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/571 (40%), Positives = 349/571 (61%), Gaps = 40/571 (7%)
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
V WN ++ YA+ L +A+++F+E P +DV +W MV+GY + G ++EAR +FD MPE+
Sbjct: 123 VIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPER 182
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVAS-------------------- 342
++ SW AM+ GYV+ + + A L+ M + N+ +
Sbjct: 183 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEI 242
Query: 343 ---------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
W++++ Y + G I ARN+FD++ D +SW ++I Y +S
Sbjct: 243 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRW 302
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+ LF E+ ER N F+ VL+ CA+L + ELG+Q+HG + +VGF+ F ++L
Sbjct: 303 REGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSL 362
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KCG++E A H + D++S ++I GYA++G +AL F+ + G KPD
Sbjct: 363 IDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDH 422
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T V +LSAC+H GLVEKG E+FYS+ + + S HYTC+VDLL R+GR ++ ++++
Sbjct: 423 VTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLS 482
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP +P W ++LG C YG +LAE+AA+ +F++EPEN YV ++N+YAA+G+W +
Sbjct: 483 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 542
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
K+R +M++ G+ K G SW E++ K H F DT HP ++I +L EL K+K++G+
Sbjct: 543 EGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGY 602
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V +T LVLHDV +E+KE L YHSEKLAVA+ ILS G I+V KNLR C DCH+AIK
Sbjct: 603 VPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKF 662
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKI R I +RD+ RFH F G CSC DYW
Sbjct: 663 ISKITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 201/436 (46%), Gaps = 28/436 (6%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N ++ Y G L AR+VFD+MP+RD+ SWNVM++GY L ARNLF+ MP+R
Sbjct: 123 VIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPER 182
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM------ 206
D SW M++GY + + A ++ M N + C+
Sbjct: 183 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEI 242
Query: 207 ---LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ + + + V W+SLM + K + +A+ IFD++ +D VSW +MI Y +++
Sbjct: 243 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRW 302
Query: 264 AEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAM 315
E LF E + +T++ +++ + R + M + + + +++
Sbjct: 303 REGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSL 362
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDC 371
I Y + ++ AR + + ++ S ++I GYAQ+G+ A FD + + D
Sbjct: 363 IDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDH 422
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP-FTSVLSTCANLASLELGKQLHG 430
+++ +++ +G E L F + + + S +T ++ A E QL
Sbjct: 423 VTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFE---QLKS 479
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSV---EEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
L ++ + F+ ++L G++ EEA +I ++ +++ TM YA G
Sbjct: 480 VLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGK 539
Query: 488 GKDALMLFESMKTVGI 503
++ + + M+ +GI
Sbjct: 540 WEEEGKMRKRMQEIGI 555
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 167/380 (43%), Gaps = 58/380 (15%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN + + + G A VF+ MP R S+N M++GY G L+ AR +FD+MP+RD
Sbjct: 125 WNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDS 184
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPK-------------------------------- 151
SW M++GYV+ A L+ +M +
Sbjct: 185 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHG 244
Query: 152 --------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
D V W++++ Y + G D AR IFD++++K+ +SW ++ Y ++ R E
Sbjct: 245 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWRE 304
Query: 204 ACMLF-ESKANWEVVSWNSLMGGF-----VKQKRLGDAKWIFDRMPVRDEVSW--NTMIT 255
LF E + E + + G + + LG + D S+ +++I
Sbjct: 305 GFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLID 364
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VS 311
Y + + A+ + + P D+ + T+++ GY QNGK DEA FD + + T V+
Sbjct: 365 MYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVT 424
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-----WNTMITGYAQSGEITHARNLFDRM 366
+ +++ ++ E F ++T K+ + + ++ A+SG +++ M
Sbjct: 425 FVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEM 484
Query: 367 PQHDC-ISWAAIIAGYAQSG 385
P WA+++ G + G
Sbjct: 485 PMKPSKFLWASVLGGCSTYG 504
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 34/224 (15%)
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
LR +++ ++ S + +++ C+ +LE GK++H + GF G + N +L M
Sbjct: 72 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGM 131
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM------------ 498
Y KCGS+ +A F+E+ ++DV SWN M+ GYA G ++A LF+ M
Sbjct: 132 YAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMV 191
Query: 499 --------------------KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ KP+ T+ ++A + + +G E + R G
Sbjct: 192 TGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVR-AG 250
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ + ++ ++D+ G+ G +DEA+N+ + + D +W +++
Sbjct: 251 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-IDKDVVSWTSMI 293
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/604 (41%), Positives = 369/604 (61%), Gaps = 31/604 (5%)
Query: 176 IFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
IF+ L N ++N LL A+ Q+ +W++ + F Q L +
Sbjct: 80 IFNHFLSFPNIFAYNALLKAFSQHN------------------AWHTTISYFNNQLVLPN 121
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQ 290
A P DE ++ +++ A + E Q++ + ++F ++V Y +
Sbjct: 122 A-------PNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFK 174
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
G A+ +FD M ++ VSWN +I+GY + +D AR +F+ M KN+ SW+TMI+GY
Sbjct: 175 VGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGY 234
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSPF 409
A+ G + AR LF+ MP + +SW A+IAGYAQ+ D++ LF +M+ G N
Sbjct: 235 ARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTL 294
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
SVLS CA+L +L+LGK +H + + E G F+GNAL MY KCG V EA F E+ +
Sbjct: 295 VSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHE 354
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+DVISW+ +I G A +G+ +A F M G++P+DI+ +G+L+AC+H GLV+KG EY
Sbjct: 355 RDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEY 414
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F M + YG+ P +HY C+VDLL RAGRLD+A++L+ +MP +P+ WGALLG CR+Y
Sbjct: 415 FDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYK 474
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
E E+ I E++ ++G V L+N+YA+ GR D + RL+MRD K G SW+
Sbjct: 475 DAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWI 534
Query: 650 EVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY 709
E+ N V+ F +GD+ HP+ RIY+ + EL++K+K G+ T LV+H++ EEEKE L
Sbjct: 535 EINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALST 594
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSEKLA+A+G+++ G IR++KNLRVC DCH+AIK ISKIV R I++RD +RFHHF
Sbjct: 595 HSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKD 654
Query: 770 GSCS 773
G CS
Sbjct: 655 GKCS 658
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 158/305 (51%), Gaps = 21/305 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + GC A +F+ M R VS+N +ISGY +G +D AR VFD M +++LV
Sbjct: 166 NSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLV 225
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN-GYADAARRIFDRM--- 180
SW+ MISGY R +L AR LFE MP R+VVSWN M++GYAQN YADA +F +M
Sbjct: 226 SWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAI-ELFRQMQHE 284
Query: 181 --LEKNEISWNGLLAAYVQNGRIEEACML--FESKANWEVVSW--NSLMGGFVKQKRLGD 234
L N+++ +L+A G ++ + F + EV + N+L + K + +
Sbjct: 285 GGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLE 344
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQ 290
AK +F M RD +SW+ +I G A Y EA F E+ + ++ +++
Sbjct: 345 AKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTH 404
Query: 291 NGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWN 344
G VD+ FD MP+ ++ + ++ + R+D A L +M + NV W
Sbjct: 405 AGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWG 464
Query: 345 TMITG 349
++ G
Sbjct: 465 ALLGG 469
>gi|147841850|emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
Length = 761
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/588 (40%), Positives = 373/588 (63%), Gaps = 22/588 (3%)
Query: 44 HLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL 103
H + +PK + D+ N I+ +RNG + A +F++MP+R+ V++N+MI+GY+
Sbjct: 50 HCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYV 109
Query: 104 LNGQLDPARQVFDQMPQRDLVSWNVMISGYV--RNKSLSAARNLFEMMPKRDVVSWNTML 161
++ AR++FD+MP RD+VSWN+MISGYV R + + R+LF+ MP+RD VSWNTM+
Sbjct: 110 RRREMAKARKLFDEMPDRDVVSWNLMISGYVSCRGRWVEEGRHLFDEMPERDCVSWNTMI 169
Query: 162 SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
SGY ++G D A ++FD M E+N +SWN ++ ++QNG +E A F + S ++
Sbjct: 170 SGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSA 229
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEV------SWNTMITGYAQNNYLAEAQRLFEEAPV 275
L+ G ++ L +AK I +D+ ++N ++ GY QN + +A++LF++ P
Sbjct: 230 LVAGLIQNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPF 289
Query: 276 KD------------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
D V +W +M+ YV+ + AR++FD M E++T+SWN MI+GYV+
Sbjct: 290 YDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMS 349
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
M+ A LF+ M + +WN+MI+G+AQ G + AR LF +PQ + +SW ++IAGY
Sbjct: 350 DMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYEN 409
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G + + L+ +M GE+ +R +SVLS C+ A+L LG Q+H Q+ K +
Sbjct: 410 NGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPI 468
Query: 444 GNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
N+L+ MY +CG++ EA F+E+ + K+VISWN MI GYA HGF DAL LFE MK +
Sbjct: 469 NNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLK 528
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
++P IT + +L+AC+H G V++G +F SM ++G+ P +H+ +VD++GR G+L+EA
Sbjct: 529 VRPTYITFISVLNACAHAGXVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEA 588
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
+L+ +MPFEPD A WGALLGACR++ ELA AAE + ++EPE++
Sbjct: 589 MDLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSA 636
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/630 (40%), Positives = 381/630 (60%), Gaps = 27/630 (4%)
Query: 176 IFDRMLEKNEI-SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR--- 231
+F++ ++ ++ SWN L+A + G E+ F ++ S +K
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 232 -LGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
L K + V D + +I Y++ L+ A+ LF+E P +++ TWT++++
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156
Query: 287 GYVQNGKVDEARMIF-DAMPEKN---------TVSWNAMIAGYVQTKRMD--MARELFEA 334
GYVQN EA M+F + + EK+ +V AMI+ R+ E
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216
Query: 335 MTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+ K + NT++ YA+ GE++ +R +FD M + D +SW ++IA YAQ+G S D
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276
Query: 390 SLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ +F M K G + N +++L CA+ +L +G LH Q++K+G+ + +++
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MYCKCG E A +AF+ + +K+V SW MIAGY HGF ++AL +F M G+KP+ I
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + +L+ACSH G +E+G +F +M+ +Y V P +HY CMVDLLGRAG + EA NL+K+
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKS 456
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
M D WG+LL ACR++ ELAE +A +F+++P N G YVLL+N+YA +GRW DV
Sbjct: 457 MKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDV 516
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++R+ ++DRG+ K GYS +E++ +VH F VGD HP+ ++IY YLEEL KL++ G+V
Sbjct: 517 ERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYV 576
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
+ VLHDV EEEKE ++R HSEKLAVA+G+++ G I V+KNLRVC DCH IK I
Sbjct: 577 PNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLI 636
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKIV R II+RD RFHHF G CSCGDYW
Sbjct: 637 SKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 187/450 (41%), Gaps = 77/450 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSS--VSYNAMISGYLLNGQLDPA 111
D+ WN I R G +L F+ M P RS+ + + + + LN
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+Q + DL + +I Y + LS AR LF+ +P+R++V+W ++++GY QN A
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165
Query: 172 AARRIFDRML-EKNE------------ISWNGLLAA--YVQNGRIEEACMLFESKANWEV 216
A +F L EK+E ++ +L+A V N + E K +
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225
Query: 217 VSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---- 270
V N+L+ + K + ++ +FD M +D VSWN+MI YAQN +A +F
Sbjct: 226 VMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGML 285
Query: 271 ------------------------------------EEAPVKDVFTWTAMVSGYVQNGKV 294
+ V +V T+++ Y + G+
Sbjct: 286 KAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQA 345
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGY----VQTKRMDMARELFEAMTCKNVASWNTMITGY 350
+ AR FD M EKN SW AMIAGY + +D+ ++ A N ++ +++
Sbjct: 346 EMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAAC 405
Query: 351 AQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+ +G + F+ M + + ++ ++GY +++ L MK R +
Sbjct: 406 SHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKV---RRD 462
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+ S+L+ C +EL + +L K+
Sbjct: 463 FVLWGSLLAACRIHKDVELAEISARELFKL 492
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 188/445 (42%), Gaps = 86/445 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF------------ 115
I + + G +A +F+ +PRR+ V++ ++I+GY+ N A VF
Sbjct: 124 IDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNG 183
Query: 116 -------DQMPQRDLVSW-----------------------------NVMISGYVRNKSL 139
D + ++S N ++ Y + +
Sbjct: 184 EEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEV 243
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-----NEISWNGLLAA 194
S +R +F+ M ++DVVSWN+M++ YAQNG + A +F ML+ NE++ + LL A
Sbjct: 244 SLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLA 303
Query: 195 YVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
G + L + V+ S++ + K + A+ FD M ++ SW
Sbjct: 304 CAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSW 363
Query: 251 NTMITGYAQNNYLAEAQRLFEE---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
MI GY + + EA +F + A VK + T+ ++++ G ++E F+AM
Sbjct: 364 TAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSH 423
Query: 307 KNTVS-----WNAMI-----AGYVQTKRMDMARELFEAMTC-KNVASWNTMITGY----- 350
+ V + M+ AGY++ A L ++M ++ W +++
Sbjct: 424 EYNVEPGVEHYGCMVDLLGRAGYIKE-----AYNLIKSMKVRRDFVLWGSLLAACRIHKD 478
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ EI+ AR LF P +C + + YA +G +D R+ I +K G L + P
Sbjct: 479 VELAEIS-ARELFKLDPS-NCGYYVLLANIYADAGRWKDVERMRILVKDRG--LVKPPGY 534
Query: 411 SVLSTCANLASLELGKQLHGQLVKV 435
S++ + +G + H Q K+
Sbjct: 535 SLVELKGRVHVFLVGDKEHPQHEKI 559
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 23/251 (9%)
Query: 47 SKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL-- 104
S SR + D+ WN I + +NG A VF+ M + YN + LL
Sbjct: 244 SLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLA 303
Query: 105 ---NGQLDPARQVFDQMPQRDLVSWNVM----ISGYVRNKSLSAARNLFEMMPKRDVVSW 157
G L + DQ+ + V+ +M I Y + ARN F+ M +++V SW
Sbjct: 304 CAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSW 363
Query: 158 NTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA-----CMLF 208
M++GY +G+A A +F +M+ + N I++ +LAA G +EE M
Sbjct: 364 TAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSH 423
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITG--YAQNNYLAE 265
E V + ++ + + +A + M V RD V W +++ ++ LAE
Sbjct: 424 EYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAE 483
Query: 266 --AQRLFEEAP 274
A+ LF+ P
Sbjct: 484 ISARELFKLDP 494
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 288/833 (34%), Positives = 431/833 (51%), Gaps = 128/833 (15%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-------------- 118
+ GC A +F+ MP ++ ++NAMI Y+ NG+ + +++ +M
Sbjct: 126 KCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPC 185
Query: 119 ---------------------PQRDLVSW----NVMISGYVRNKSLSAARNLFEMMP-KR 152
+ VS N ++ Y + L+ AR LF+ MP K
Sbjct: 186 ILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE 245
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEE 203
DVVSWN+M+S Y+ NG + A R+F M L N ++ L A +++ G
Sbjct: 246 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 305
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
A +L +S V N+L+ + + ++G+A IF M D +SWN+M++G+ QN
Sbjct: 306 ATVL-KSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLY 364
Query: 264 AEAQRLFEE------------------APVK---------------------DVFTWTAM 284
EA + + E A + D+ ++
Sbjct: 365 HEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSL 424
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--------- 335
V Y + + IFD MP+K+ VSW +IAG+ Q A ELF +
Sbjct: 425 VDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 484
Query: 336 -----------------TCKNVASW------------NTMITGYAQSGEITHARNLFDRM 366
+ K + S+ N ++ Y + G + +A +F+ +
Sbjct: 485 MMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELI 544
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D +SW ++I+ Y +G + ++L LF MK G + S+LS A+L++L+ GK
Sbjct: 545 EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGK 604
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
++HG L++ GF + + L+ MY +CG++E++ + F I +KD++ W +MI Y HG
Sbjct: 605 EIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHG 664
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
G+ A+ LF M+ I PD I V +L ACSH+GL+ +G + SM +Y + P +HY
Sbjct: 665 CGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHY 724
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
C+VDLLGRA L+EA +K M EP A W ALLGAC+++ EL E AA+ + EM+P
Sbjct: 725 ACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDP 784
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
EN G YVL+SN+Y+A RW DV VR++M+ G+KK G SW+EV NKVHTF D HP
Sbjct: 785 ENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHP 844
Query: 667 EKDRIYAYLEELEFKL-KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
+ IY+ L ++ KL K+ G+V TK VLH+ EEEK ML HSE+LA+AYG+L+ P
Sbjct: 845 QSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPE 904
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G +R+ KNLRVC DCHN K ISK R +++RD NRFHHF GG CSCGD W
Sbjct: 905 GASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 215/466 (46%), Gaps = 60/466 (12%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----D 246
L+ Y + G + +A LF+ + + +WN+++G +V + ++ M V D
Sbjct: 120 LVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLD 179
Query: 247 EVSWNTMITG---YAQNNYLAEAQRL-FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
++ ++ Y AE L +E V VF ++V Y + ++ AR +FD
Sbjct: 180 ACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 239
Query: 303 AMPEK-NTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCK------ 338
MPEK + VSWN+MI+ Y + A LF M C+
Sbjct: 240 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIK 299
Query: 339 ----------------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
NV N +I YA+ G++ A N+F M D ISW ++++G+
Sbjct: 300 QGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFV 359
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
Q+G ++L+ + EM+ G++ + S+++ A + G Q+H +K G ++
Sbjct: 360 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQ 419
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
VGN+L+ MY K S++ F+++ DKDV+SW T+IAG+A++G AL LF ++ G
Sbjct: 420 VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG 479
Query: 503 IKPDDITMVGILSACSHTGLVEKGTE---YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
I D + + IL ACS L+ E Y V+ N +VD+ G G +
Sbjct: 480 IDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNG-----IVDVYGECGNV 534
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
D A + + + F+ D +W +++ Y LA +A E+ M+
Sbjct: 535 DYAARMFELIEFK-DVVSWTSMISC---YVHNGLANEALELFHLMK 576
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 185/401 (46%), Gaps = 49/401 (12%)
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A + A VF T +V Y + G + +A +FD MP K +WNAMI YV
Sbjct: 102 AHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEP 161
Query: 326 DMARELFEAMTCKNVA---------------------------------------SWNTM 346
+ EL+ M + N++
Sbjct: 162 LGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSI 221
Query: 347 ITGYAQSGEITHARNLFDRMPQ-HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+ Y + ++ AR LFDRMP+ D +SW ++I+ Y+ +G S ++LRLF EM++ N
Sbjct: 222 VGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPN 281
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
F + L C + + ++ G +H ++K + FV NAL+ MY + G + EA + F
Sbjct: 282 TYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFY 341
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ D D ISWN+M++G+ ++G +AL + M+ G KPD + ++ I++A + +G
Sbjct: 342 NMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLH 401
Query: 526 GTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + + Y+M G+ + + +VD+ + + + MP + D +W ++
Sbjct: 402 GMQIHAYAMKN--GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAG 458
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLL--SNLYAASG 623
+ + +A E+ E++ E + V++ S L A SG
Sbjct: 459 ---HAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSG 496
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 11/286 (3%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y + G + A LFD MP +W A+I Y +G SL L+ EM+ G L+
Sbjct: 120 LVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLD 179
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
F +L C L G ++HG +K G+ + FV N+++ MY KC + A F+
Sbjct: 180 ACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFD 239
Query: 466 EIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ +K DV+SWN+MI+ Y+ +G +AL LF M+ + P+ T V L AC + ++
Sbjct: 240 RMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIK 299
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + ++ N ++ + R G++ EA N+ NM + D +W ++L
Sbjct: 300 QGM-FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD-DWDTISWNSMLSG 357
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAASGRWGD 627
+ + L +A + EM +AG V + ++ AAS R G+
Sbjct: 358 ---FVQNGLYHEALQFYHEM--RDAGQKPDLVAVISIIAASARSGN 398
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 142/367 (38%), Gaps = 89/367 (24%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM-------------------PRRSSVSYNAM 98
DWD WN ++ ++NG AL ++ M R + +
Sbjct: 345 DWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQ 404
Query: 99 ISGYLLNGQLDPARQV--------------------FDQMPQRDLVSWNVMISGYVRNKS 138
I Y + LD QV FD+MP +D+VSW +I+G+ +N S
Sbjct: 405 IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGS 464
Query: 139 LSAARNLFE-----------MMPK---------------------------RDVVSWNTM 160
S A LF MM D+V N +
Sbjct: 465 HSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGI 524
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEV 216
+ Y + G D A R+F+ + K+ +SW +++ YV NG EA LF E+ +
Sbjct: 525 VDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDS 584
Query: 217 VSWNSLMGGFVKQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+S S++ L K ++ + V + +T++ YA+ L +++ +F
Sbjct: 585 ISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNF 644
Query: 273 APVKDVFTWTAMVSGYVQNG----KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
KD+ WT+M++ Y +G +D R + D + +++ A++ + M+
Sbjct: 645 IRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEG 704
Query: 329 RELFEAM 335
R E+M
Sbjct: 705 RRFLESM 711
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 405 NRSP--------FTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCG 455
N+SP ++SVL C + +L G+Q+H ++ F+ L+ MY KCG
Sbjct: 69 NQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCG 128
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ +A F+ + K + +WN MI Y +G +L L+ M+ GI D T IL
Sbjct: 129 CLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILK 188
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC G E + + G + +V + + L+ A+ L MP + D
Sbjct: 189 ACGLLKDRRYGAE-VHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDV 247
Query: 576 ATWGALLG----------ACRLYGKTELAEKA 597
+W +++ A RL+G+ + A A
Sbjct: 248 VSWNSMISAYSSNGQSIEALRLFGEMQKASLA 279
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/677 (38%), Positives = 384/677 (56%), Gaps = 75/677 (11%)
Query: 153 DVVSWNTMLSGY--AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
D +++N++L G + +++ A + + + N SWN ++A + G EA F S
Sbjct: 1946 DGITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSS 2005
Query: 211 KANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
++ S +K L D +++G + Q+
Sbjct: 2006 LRKLGLIPTRSSFPCTIKSCSALCD------------------LVSGRMSH------QQA 2041
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
F D+F +A++ Y + G++ +AR +FD +P +N VSW +MI GYVQ ++ D A
Sbjct: 2042 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 2101
Query: 330 ELFEAM-------------------------TCKNVAS---------------------- 342
LF+ C V+
Sbjct: 2102 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 2161
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY-G 401
NT++ YA+ G+ ++ +FD M + D ISW ++IA YAQSG S ++L +F M R+ G
Sbjct: 2162 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 2221
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
R N ++VL CA+ +L GK +H Q++K+ E VG +++ MYCKCG VE A
Sbjct: 2222 VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAK 2281
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + +K+V SW M+AGY HG K+AL +F M G+KP+ IT V +L+ACSH G
Sbjct: 2282 KTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAG 2341
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE+G +F +M Y + P +HY CMVDL GRAG L+EA NL+K M +PD WG+L
Sbjct: 2342 LVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 2401
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++ +L E AA+ +FE++P+N G YVLLSNLYA +GRW DV ++R+ M++R +
Sbjct: 2402 LGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 2461
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G+S +E++ +VH F VGD HP + IY YLE+L +L++ G+V + VLHDV EE
Sbjct: 2462 KPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEE 2521
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EKE +LR HSEKLAVA+G+++ G I ++KNLRVC DCH IK ISK+V R ++RD+
Sbjct: 2522 EKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDS 2581
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHHF G CSCGDYW
Sbjct: 2582 KRFHHFKDGVCSCGDYW 2598
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 177/340 (52%), Gaps = 8/340 (2%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVS 286
R+ A +F ++ +WN +I N +A L++ + D FT+ ++
Sbjct: 74 RIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 287 GYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
+D +++ ++ + + N +I Y + A ++FE M +NV S
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS 193
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
W T+I+G G++ AR +FD +P + +SW A+I GY ++ E++L LF M+
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
N S++ C + L LG+ +H +K E G ++G AL+ MY KCGS+++A
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
FE + K + +WN+MI HG G++AL LF M+ V +KPD IT +G+L AC H
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN 373
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
V++G YF M + YG+ P +HY CM +L R+ LDEA
Sbjct: 374 VKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 139/557 (24%), Positives = 231/557 (41%), Gaps = 126/557 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSV-----SYNAMISGYLLNGQL 108
++ WN I R G AL F+S+ P RSS S +A+ L++G++
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD--LVSGRM 2036
Query: 109 DPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
+Q F + DL + +I Y + L AR LF+ +P R+VVSW +M++GY QN
Sbjct: 2037 S-HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 2095
Query: 169 YADAARRIFDRMLEK-------NEISWNGLL-------AAYVQNGRIEEACMLFESKANW 214
AD A +F LE+ N + + ++ + V I E F K +
Sbjct: 2096 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF 2155
Query: 215 E--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ + N+LM + K + +K +FD M +D++SWN+MI YAQ+ EA +F
Sbjct: 2156 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF-H 2214
Query: 273 APVKDV------FTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQT 322
V+ V T +A++ G + + I D + E N ++I Y +
Sbjct: 2215 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC 2274
Query: 323 KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
R++MA++ F+ M KNV SW M+ GY G
Sbjct: 2275 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGR--------------------------- 2307
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
++++L +F +M R G + N F SVL+ C++
Sbjct: 2308 ----AKEALDIFYKMVRAGVKPNYITFVSVLAACSH------------------------ 2339
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEI-----VDKDVISWNTMIAGYARHGFGKDALMLFES 497
G VEE +H F + ++ + + M+ + R G +A L +
Sbjct: 2340 -----------AGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKR 2388
Query: 498 MKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
MK +KPD + +L AC + L E + + ++ D N +Y + +L
Sbjct: 2389 MK---MKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPD-----NCGYYVLLSNLYA 2440
Query: 555 RAGR---LDEAQNLMKN 568
AGR ++ + LMKN
Sbjct: 2441 DAGRWADVERMRMLMKN 2457
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 138/298 (46%), Gaps = 42/298 (14%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I Y+ G I +A LF ++ +W II +G SE +L L+ M G +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK------------ 453
+ F V+ C N S++LGK +HG L+K GF FV N L+ Y K
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 454 -------------------CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
CG ++EA F+EI K+V+SW MI GY R+ ++AL L
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGT---EYFYSMNRDYGVIPNSKHYTCMVD 551
F+ M+ I P++ TMV ++ AC+ G++ G +Y + GV T ++D
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG----TALID 300
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
+ + G + +A + + MP TW +++ + ++G L ++A + EME N
Sbjct: 301 MYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHG---LGQEALNLFSEMERVNV 354
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 171/375 (45%), Gaps = 35/375 (9%)
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
DQ+ R L+ Y + ++ A LF + +WN ++ NG ++ A
Sbjct: 58 DQLLTRKLIHL------YSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALM 111
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF----VKQKR 231
++ M+ G+ A + +AC F S +VV + + GF Q
Sbjct: 112 LYKNMV------CQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNN 165
Query: 232 LGD----------AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
L D A +F++M VR+ VSW T+I+G L EA+R+F+E P K+V +W
Sbjct: 166 LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSW 225
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTV----SWNAMIAGYVQTKRMDMAREL--FEAM 335
TAM++GY++N + +EA +F M +N + ++I + + + R + +
Sbjct: 226 TAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIK 285
Query: 336 TCKNVASW--NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
C + + +I Y++ G I A +F+ MP+ +W ++I G +++L L
Sbjct: 286 NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNL 345
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYC 452
F EM+R + + F VL C ++ +++ G ++ + G + +Y
Sbjct: 346 FSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYA 405
Query: 453 KCGSVEEAYHAFEEI 467
+ +++EA+ + +E+
Sbjct: 406 RSNNLDEAFKSTKEV 420
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 56/321 (17%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR------------------------------SSV 93
WN+ I + NG + AL ++ +M + S +
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152
Query: 94 SY---------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
Y N +I Y G A +VF++M R++VSW +ISG + L AR
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNG- 199
+F+ +P ++VVSW M++GY +N + A +F RM + NE + L+ A + G
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 200 -RIEEACMLFESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ + K E+ + +L+ + K + DA +F+ MP + +WN+MIT
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332
Query: 257 YAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS- 311
+ EA LF E VK D T+ ++ V V E F M + ++
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392
Query: 312 ----WNAMIAGYVQTKRMDMA 328
+ M Y ++ +D A
Sbjct: 393 IPEHYECMTELYARSNNLDEA 413
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 39/243 (16%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L C N L +Q+H ++++ G + L+ +Y G + A F +I +
Sbjct: 33 LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH-----TGLVEKG 526
+WN +I +G + ALML+++M GI D T ++ AC++ G V G
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 527 TEYFYSMNRDYGV-------------------------IPNSKHYTCMVDLLGRAGRLDE 561
+ Y + D V + N +T ++ L G L E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLY 619
A+ + +P + +W A++ Y + + E+A E+ M+ EN Y ++S +
Sbjct: 210 ARRIFDEIP-SKNVVSWTAMING---YIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265
Query: 620 AAS 622
A +
Sbjct: 266 ACT 268
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 272/805 (33%), Positives = 417/805 (51%), Gaps = 105/805 (13%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N+ + + + G A +F+ MPRR S+N ++SGY + + F M
Sbjct: 75 NIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDS 134
Query: 119 -----------------------PQRDLVSW-----------NVMISGYVRNKSLSAARN 144
PQ + W ++ +VR + A
Sbjct: 135 LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASR 194
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
LF + + + N+ML+GYA+ D A F+ M E++ +SWN ++AA Q+GR+ EA
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254
Query: 205 CML-------------------FESKANWEVVSW--------------------NSLMGG 225
L + A + W ++L+
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTW 281
+ K +AK +F+ + R+ VSW +I G Q +++ LF + + D F
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 282 TAMVSGYVQNGKVDEAR----MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
++SG + R + + + V N++I+ Y + + A +F +M+
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+++ SW +MIT Y+Q G I AR FD M + I+W A++ Y Q G ED L+++ M
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAM 494
Query: 398 KRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
+ + +P + ++ CA++ + +LG Q+ G VK G V NA + MY K
Sbjct: 495 L---SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSK 551
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG + EA F+ + KDV+SWN MI GY++HG GK A F+ M + G KPD I+ V +
Sbjct: 552 CGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAV 611
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
LS CSH+GLV++G YF M R +G+ P +H++CMVDLLGRAG L EA++L+ MP +P
Sbjct: 612 LSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKP 671
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
A WGALL AC+++G ELAE AA+ +FE++ ++G Y+LL+ +Y+ +G+ D ++VR
Sbjct: 672 TAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRK 731
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
MRD+G+KK GYSW+EV+NKVH F D HP+ I ++EL K+ G+V +
Sbjct: 732 LMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRT--- 788
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
E + + +HSEKLAVA+GI+S+PA PI +MKNLR+C DCH IK IS +
Sbjct: 789 ------ESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTD 840
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R ++RD RFHHF GSCSCGDYW
Sbjct: 841 REFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 204/467 (43%), Gaps = 87/467 (18%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANW-EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
N LL AY+ G + +A L + V++ N +M G+ KQ L DA+ +FDRMP RD
Sbjct: 43 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 102
Query: 248 VSWNTMITGYAQNNYLAEAQRLF-----------------------------EEAPVKDV 278
SWNT+++GY Q + F E AP
Sbjct: 103 ASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLG 162
Query: 279 FTW-----------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
W TA+V +V+ G VD A +F + N+M+AGY + +D
Sbjct: 163 LFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDH 222
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A E FE M ++V SWN MI +QSG + A
Sbjct: 223 AIEYFEDMAERDVVSWNMMIAALSQSGRVREA---------------------------- 254
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
L L +EM R G RL+ + +TS L+ CA L SL GKQLH ++++ + +V +AL
Sbjct: 255 ---LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASAL 311
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ +Y KCGS +EA F + D++ +SW +I G ++ ++ LF M+ + D
Sbjct: 312 IELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 371
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYG-----VIPNSKHYTCMVDLLGRAGRLDEA 562
+ ++S C + + G + +S+ G V+ NS ++ L + G L A
Sbjct: 372 FALATLISGCFNRMDLCLGRQ-LHSLCLKSGHNRAIVVSNS-----LISLYAKCGDLQNA 425
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
+ + +M E D +W +++ A Y + KA E M NA
Sbjct: 426 EFVFSSMS-ERDIVSWTSMITA---YSQIGNIIKAREFFDGMATRNA 468
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 147/610 (24%), Positives = 249/610 (40%), Gaps = 110/610 (18%)
Query: 90 RSSVSYNAMISGYLLNGQL---DPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
RS S A+ L+G+L A VF Q N ++ Y+ +LS AR L
Sbjct: 12 RSCGSRGALAGARALHGRLVTVGLASAVFLQ---------NTLLHAYLSCGALSDARRLL 62
Query: 147 EM-MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
+ + +V++ N M++GYA+ G A +FDRM ++ SWN L++ Y Q R +
Sbjct: 63 RADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGL 122
Query: 206 MLFESKANWEVVSWNSLMGGFV---------------KQKRLGDAKWIFDRMPVRDEVSW 250
F S S +SL F +L W FD D
Sbjct: 123 ETFVSMHR----SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWG--DPDVE 176
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
++ + + Y+ A RLF + +F +M++GY + +D A F+ M E++ V
Sbjct: 177 TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVV 236
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNV-------------------ASW-------- 343
SWN MIA Q+ R+ A L M K V W
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
+ +I YA+ G A+ +F+ + + +SW +I G Q S+
Sbjct: 297 IRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSV 356
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF +M+ +++ +++S C N L LG+QLH +K G V N+L+ +Y
Sbjct: 357 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 416
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA---------------------------- 483
KCG ++ A F + ++D++SW +MI Y+
Sbjct: 417 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLG 476
Query: 484 ---RHGFGKDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
+HG +D L ++ +M + + PD +T V + C+ G + G + G+
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQ-IIGHTVKAGL 535
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
I N + + + GR+ EAQ L ++ D +W A++ Y + + ++AA+
Sbjct: 536 ILNVSVANAAITMYSKCGRISEAQKLF-DLLNGKDVVSWNAMITG---YSQHGMGKQAAK 591
Query: 600 VIFEMEPENA 609
+M + A
Sbjct: 592 TFDDMLSKGA 601
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 139/604 (23%), Positives = 253/604 (41%), Gaps = 132/604 (21%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
GD D+ + +R G D A +F+ + R + N+M++GY +D A + F+
Sbjct: 171 GDPDVE--TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFE 228
Query: 117 QMPQRDLVSWNVMI-----SGYVR---------------------NKSLSAARNLFEM-- 148
M +RD+VSWN+MI SG VR SL+A LF +
Sbjct: 229 DMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGW 288
Query: 149 -----------MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
+P+ D + ++ YA+ G A+R+F+ + ++N +SW L+ +Q
Sbjct: 289 GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348
Query: 198 NGRIEEACMLF---------------------------------------ESKANWEVVS 218
++ LF +S N +V
Sbjct: 349 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 408
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
NSL+ + K L +A+++F M RD VSW +MIT Y+Q + +A+ F+ ++
Sbjct: 409 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNA 468
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VSWNAMIAGYVQTKRMDMARELF- 332
TW AM+ Y+Q+G ++ ++ AM + V++ + G + ++
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528
Query: 333 ---EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+A NV+ N IT Y++ G I+ A+ LFD + D +SW A+I GY+Q G +
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALL 448
+ + F +M G + + + +VLS C++ ++ GK + +V G G + ++
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 648
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
+ + G + EA ++++DK + +KP
Sbjct: 649 DLLGRAGHLTEA----KDLIDK------------------------------MPMKPTAE 674
Query: 509 TMVGILSACSHTG---LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+LSAC G L E ++ + ++ P+S Y + + AG+ D++ +
Sbjct: 675 VWGALLSACKIHGNDELAELAAKHVFELDS-----PDSGSYMLLAKIYSDAGKSDDSAQV 729
Query: 566 MKNM 569
K M
Sbjct: 730 RKLM 733
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 64/355 (18%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVA 67
RQLHS C+ H ++I + S + + Y L+ S + DI W
Sbjct: 391 RQLHSLCLKSGHNRAI--VVSNSLISLYAKCGDLQNAEFVFSSMSER-----DIVSWTSM 443
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLV-S 125
IT + + G A F+ M R+++++NAM+ Y+ +G + +++ M Q+D+
Sbjct: 444 ITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 503
Query: 126 W--------------------------------------NVMISGYVRNKSLSAARNLFE 147
W N I+ Y + +S A+ LF+
Sbjct: 504 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 563
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEE 203
++ +DVVSWN M++GY+Q+G A + FD ML K + IS+ +L+ +G ++E
Sbjct: 564 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 623
Query: 204 ACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG- 256
+ F+ +S ++ ++ + L +AK + D+MP++ W +++
Sbjct: 624 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 683
Query: 257 -YAQNNYLAE--AQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
N+ LAE A+ +FE ++P D ++ + Y GK D++ + M +K
Sbjct: 684 KIHGNDELAELAAKHVFELDSP--DSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK 736
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 46/300 (15%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE-EI 467
L +C + +L + LHG+LV VG + F+ N LL Y CG++ +A +I
Sbjct: 7 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+ +VI+ N M+ GYA+ G DA LF+ M + + M G A G
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFL----DGL 122
Query: 528 EYFYSMNRDYGVIPNSKHYTC-----------------------------------MVDL 552
E F SM+R +PN+ + C +VD+
Sbjct: 123 ETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDM 182
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
R G +D A L + L G +LYG + A E +M + +
Sbjct: 183 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYG----IDHAIEYFEDMAERDVVSW 238
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
++ + SGR + + ++M +GV+ T S L ++ + G LH + R
Sbjct: 239 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 298
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 277/753 (36%), Positives = 414/753 (54%), Gaps = 76/753 (10%)
Query: 79 SALHVFNSMPRRSSVSYNAM---ISGYLLNG--QLDPARQVFDQMPQRDLVSWNVMISGY 133
S+ + F+ +P S Y+++ S LL+ L R + QM + L + N +S
Sbjct: 12 SSSYPFHFLPSSSDPPYDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKL 71
Query: 134 VR-------NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
+ L A ++FE + + +++ WNTM G+A + +A +++ M+
Sbjct: 72 LELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISL--- 128
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
GLL + ++C +SKA E + G +K LG +D D
Sbjct: 129 ---GLLPNSYTFPFLLKSCA--KSKAFKE---GQQIHGHVLK---LG-----YDL----D 168
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++I+ Y QN L +A+++F+ +P +DV ++TA++ GY G ++ A+ +FD +P
Sbjct: 169 LFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPV 228
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN--------------------------V 340
K+ VSWNAMI+GY +T A ELF+ M N V
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 341 ASW-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
SW N+++ Y++ GE+ A LF+ + D ISW +I GY
Sbjct: 289 HSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLY 348
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA--GCFVGN 445
+++L LF EM R GER N S+L CA+L ++++G+ +H + K A +
Sbjct: 349 KEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRT 408
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+L+ MY KCG +E A+ F I+ K + SWN MI G+A HG A +F M+ +GI+P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEP 468
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
DDIT VG+LSACS +G+++ G F +M +DY + P +HY CM+DLLG +G EA+ +
Sbjct: 469 DDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 528
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ NM EPD W +LL AC++ G EL E A+ + ++EPEN G YVLLSN+YA +GRW
Sbjct: 529 INNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRW 588
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
+V+K+R + D+G+KKV G S +E+ + VH F +GD HP IY LEE+E L++
Sbjct: 589 NEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKA 648
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
GFV T VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A
Sbjct: 649 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 708
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKI R II RD RFHHF G CSC DYW
Sbjct: 709 KLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 198/418 (47%), Gaps = 39/418 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ I+ +++NG + A VF+ P R VSY A+I GY G ++ A+++FD+
Sbjct: 166 DLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDE 225
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAA 173
+P +D+VSWN MISGY + A LF+ M K ++ + T++S AQ+G +
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELG 285
Query: 174 RRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R++ D N N L+ Y + G +E AC LFE +V+SWN+L+GG+
Sbjct: 286 RQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHM 345
Query: 230 KRLGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFTW-- 281
+A +F M E + TM++ +L ++ + +K
Sbjct: 346 NLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASS 405
Query: 282 --TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
T+++ Y + G ++ A +F+++ K+ SWNAMI G+ R D A ++F M
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIG 465
Query: 340 V----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDS 390
+ ++ +++ ++SG + R++F M Q I+ + +I SG
Sbjct: 466 IEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSG----- 520
Query: 391 LRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKVGFE-AGCFV 443
LF E + + P + S+L C ++ELG+ L+K+ E GC+V
Sbjct: 521 --LFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYV 576
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/603 (40%), Positives = 354/603 (58%), Gaps = 47/603 (7%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---------- 271
LM + Q A++IFDR ++ V +N MI Y NN EA +F+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 272 ------------------------EAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFD 302
+A VK ++F A+V+ Y + G + EAR + D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-------ASWNTMITGYAQSGE 355
MP ++ VSWN+M+AGY Q+ + D A E+ + M N+ AS + ++ Y
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC-YTSLEN 255
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ + N+F+RM + + ISW +IA Y + +++ LF++M+ G + + S+L
Sbjct: 256 VQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C +L++L LG++LH + K + + NALL MY KCG +EEA F+++ +DV+SW
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSW 375
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+M++ Y R G G DA+ LF M G PD I V +LSACSHTGL+++G YF M
Sbjct: 376 TSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTE 435
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
YG++P +H+ CMVDL GRAG ++EA + +K MP EP+ WGALL ACR++ K ++
Sbjct: 436 QYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGL 495
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AA+++F++ P+ +G YVLLSN+YA +G W DV VR M+ G+KKV G S +E+ +V
Sbjct: 496 VAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQV 555
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
HTF GD HP+ IY L+ L K+K+ G++ T+ LHDV E+KE L HSEKLA
Sbjct: 556 HTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLA 615
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+ + IL+ G PIR+ KNLRVC DCH AIK ISKIV R II+RD NRFHHFS G CSCG
Sbjct: 616 IVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCG 675
Query: 776 DYW 778
DYW
Sbjct: 676 DYW 678
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 191/429 (44%), Gaps = 72/429 (16%)
Query: 3 GNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSK--KTLKRHLNSKSRNKPKPAGDWD 60
G L +LHS ++++H + I+ + Y ++ ++ R++ +S K +
Sbjct: 50 GIKTLNKLHSKIVINEHLR-IDPTLAIKLMRAYSAQGETSVARYIFDRSLEK-------N 101
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVFD 116
+ +NV I +++ N AL +F M + ++ ++ L QV D
Sbjct: 102 VVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHD 161
Query: 117 QMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+ + +L N +++ Y + L AR + + MP RDVVSWN+M++GYAQ+G D
Sbjct: 162 AIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDD 221
Query: 173 ARRI-------------------------------------FDRMLEKNEISWNGLLAAY 195
A I F+RM +KN ISWN ++A Y
Sbjct: 222 ALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIY 281
Query: 196 VQNGRIEEACMLF----ESKANWEVVSWNSLMG--GFVKQKRLGDA--KWIFDRMPVRDE 247
V N EA LF E + V+ SL+ G + LG K+I +
Sbjct: 282 VNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNL 341
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+ N ++ YA+ L EA+ +F++ ++DV +WT+M+S Y ++G+ +A +F M +
Sbjct: 342 LLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDS 401
Query: 308 ----NTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITH 358
+++++ ++++ T +D R F MT + + M+ + ++GE+
Sbjct: 402 GQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEE 461
Query: 359 ARNLFDRMP 367
A + +MP
Sbjct: 462 AYSFIKQMP 470
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 278/839 (33%), Positives = 424/839 (50%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISG-----------------YLLNGQ 107
N I + RNG D A VF+ + + S+ AMISG Y+L
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 108 LDP--------------ARQVFDQMP--------QRDLVSWNVMISGYVRNKSLSAARNL 145
P + ++ +Q+ D N ++S Y +L +A ++
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M +RD V++NT+++G +Q GY + A +F RM LE + + L+ A +G +
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 202 EEACMLFESKANWEVVSWNSLMGG----FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
L S N + G + K + A F V + V WN M+ Y
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 258 AQNNYLAEAQRLFEEAPVKDV--------------------------------------- 278
+ L + R+F + ++++
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+ + ++ Y + GK+D A I K+ VSW MIAGY Q D A F M +
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 339 NVAS---------------------------------------WNTMITGYAQSGEITHA 359
+ S N ++T Y++ G+I +
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F++ D I+W A+++G+ QSG +E++LR+F+ M R G N F S + +
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++ GKQ+H + K G+++ V NAL+ MY KCGS+ +A F E+ K+ +SWN +I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
Y++HGFG +AL F+ M ++P+ +T+VG+LSACSH GLV+KG YF SMN +YG+
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P +HY C+VD+L RAG L A+ ++ MP +PDA W LL AC ++ E+ E AA
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPE++ YVLLSNLYA S +W R KM+++GVKK G SW+EV+N +H+F
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD HP D I+ Y ++L + + G+V +L+++ E+K+ ++ HSEKLA+++G
Sbjct: 946 VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 1005
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+PA PI VMKNLRVC DCH IK +SK+ R II+RD RFHHF GG+CSC DYW
Sbjct: 1006 LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 235/558 (42%), Gaps = 76/558 (13%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML 161
YL G L A +VFD+MP+R + +WN MI + LF M +V
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 162 SGYAQNGYA-----DAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKA 212
SG + D +I R+L + + + N L+ Y +NG ++ A +F+
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL--- 269
+ SW +++ G K + +A +F M V M T YA ++ L+ +++
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYV-----LGIMPTPYAFSSVLSACKKIESL 304
Query: 270 ----------FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+ D + A+VS Y G + A IF M +++ V++N +I G
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL 364
Query: 320 VQTKRMDMARELFEAM----------------------------------TCKNVASWNT 345
Q + A ELF+ M T K + N
Sbjct: 365 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 424
Query: 346 MITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
I G YA+ +I A + F + + W ++ Y +S R+F +M+
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
N+ + S+L TC L LELG+Q+H Q++K F+ +V + L+ MY K G ++ A
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
+ KDV+SW TMIAGY ++ F AL F M GI+ D++ + +SAC+
Sbjct: 545 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP----DAA 576
+++G + ++ G + +V L R G+++E+ + FE D
Sbjct: 605 QALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNI 658
Query: 577 TWGALLGACRLYGKTELA 594
W AL+ + G E A
Sbjct: 659 AWNALVSGFQQSGNNEEA 676
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 170/714 (23%), Positives = 300/714 (42%), Gaps = 110/714 (15%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
R S+V N +I Y NG +D AR+VFD + +D SW MISG +N+ + A LF
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF-- 276
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRI-------------FDRMLEKNEISWNGLLAAY 195
D+ M + YA + A ++I + N L++ Y
Sbjct: 277 ---CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI 254
G + A +F + + + V++N+L+ G + A +F RM + E NT+
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 255 T------------------------GYAQNNY--------------LAEAQRLFEEAPVK 276
+ G+A NN + A F E V+
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 277 DVFTWTAMVSGYVQNGKVDEAR---MIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR 329
+V W M+ Y G +D+ R IF M + N ++ +++ ++ +++
Sbjct: 454 NVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 330 ELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ + N + +I YA+ G++ A ++ R D +SW +IAGY Q
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ + +L F +M G R + T+ +S CA L +L+ G+Q+H Q GF + N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ +Y +CG +EE+Y AFE+ D I+WN +++G+ + G ++AL +F M GI
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
++ T + A S T +++G + + + G ++ ++ + + G + +A+
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA-GMYVLLSNLYAASGR 624
+ + +W A++ A Y K +A + +M N +V L + +A
Sbjct: 750 FLEVS-TKNEVSWNAIINA---YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNK--------VHTFSVGDTLHPEK--DRIYAY 674
G V K G ++ E N H V D L R +
Sbjct: 806 IGLVDK--------------GIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 675 LEELEFKLKQDGFVYSTKL---VLH---DVGEEEKEHMLRYHSEKLAVAYGILS 722
++E+ +K D V+ T L V+H ++GE H+L E A Y +LS
Sbjct: 852 IQEM--PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA-TYVLLS 902
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 209/441 (47%), Gaps = 51/441 (11%)
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR- 324
A ++F+E P + +FTW M+ + E +F M +N +G ++ R
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 325 ----MDM-----ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
D+ AR L++ + V N +I Y+++G + AR +FD + D SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+I+G +++ +++RLF +M G F+SVLS C + SLE+G+QLHG ++K+
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
GF + +V NAL+ +Y G++ A H F + +D +++NT+I G ++ G+G+ A+ LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ M G++PD T+ ++ ACS G + +G + ++ G N+K +++L +
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 556 A----------------------------GRLDEAQN---LMKNMPFE---PDAATWGAL 581
G LD+ +N + + M E P+ T+ ++
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
L C G EL E+ I + + NA + +L ++YA G+ + ++ + V
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 641 ----KKVTGYSWLEVQNKVHT 657
+ GY+ +K T
Sbjct: 557 VSWTTMIAGYTQYNFDDKALT 577
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 22/324 (6%)
Query: 305 PEKNTVSWNAMIAGYVQTK-RMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHA 359
P T+ W ++ G ++T +D R+L + + S + Y G++ A
Sbjct: 82 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-AN 418
+FD MP+ +W +I A + LF+ M N F+ VL C
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+ ++ +Q+H +++ G V N L+ +Y + G V+ A F+ + KD SW M
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I+G +++ +A+ LF M +GI P +LSAC +E G E + + G
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLG 318
Query: 539 VIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+S Y C +V L G L A+++ NM + DA T+ L+ G EK
Sbjct: 319 F--SSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG---YGEK 372
Query: 597 AAEVIFEM-----EPENAGMYVLL 615
A E+ M EP++ + L+
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLV 396
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 401 GERLNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G R N +L C SL+ G++LH Q++K+G ++ + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A+ F+E+ ++ + +WN MI A + LF M + + P++ T G+L AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 520 TGLVEKGTE-----YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ E Y RD V+ N ++DL R G +D A+ + + + D
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNP-----LIDLYSRNGFVDLARRVFDGLRLK-D 252
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEM 604
++W A++ K E +A + +M
Sbjct: 253 HSSWVAMISG---LSKNECEAEAIRLFCDM 279
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 139/336 (41%), Gaps = 63/336 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N +T + R G + + F ++++NA++SG+ +G + A +VF +M
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 120 QRDLVS---------------------------------------WNVMISGYVRNKSLS 140
+ + + N +IS Y + S+S
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
A F + ++ VSWN +++ Y+++G+ A FD+M+ N ++ G+L+A
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Query: 197 QNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G +++ FES + +S + ++ + L AK MP++ D + W
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 251 NTMITGYA--QNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
T+++ +N + E A L E P +D T+ + + Y + K D + M E
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 307 KNT-----VSW----NAMIAGYVQTKRMDMARELFE 333
K SW N++ + YV + +A E+ E
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 284/785 (36%), Positives = 420/785 (53%), Gaps = 101/785 (12%)
Query: 90 RSSVSYNAMI-SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
+SS+ A I SG L G+L + + +P D V N +I+ Y + A ++F
Sbjct: 41 KSSLLLKACIRSGNLELGKLLHHKLIDSGLP-LDSVLLNSLITLYSKCGDWENALSIFRN 99
Query: 149 M--PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE-------KNEISWNGLLAA----- 194
M KRD+VSW+ ++S +A N A F ML+ NE + LL +
Sbjct: 100 MGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPL 159
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK-RLGDAKWIFDRMPVRDEVSWNTM 253
+ G A +L + V +L+ F K + A+ +FD+M ++ V+W M
Sbjct: 160 FFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLM 219
Query: 254 ITGYAQNNYLAEAQRLF------EEAPVK------------------------------- 276
IT Y+Q L +A LF E P K
Sbjct: 220 ITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGL 279
Query: 277 --DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
DVF +V Y ++ V+ +R IF+ M N +SW A+I+GYVQ+++ A +LF
Sbjct: 280 ASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCN 339
Query: 335 M-----------------TCKNVASW----------------------NTMITGYAQSGE 355
M C ++ + N++I YA+SG
Sbjct: 340 MLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGT 399
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT--SVL 413
+ AR F+ + + + IS+ A++ S++S +E G SPFT +L
Sbjct: 400 MECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGA----SPFTYACLL 455
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S A + ++ G+Q+H +VK GF + NAL+ MY KCG+ E A F ++ ++VI
Sbjct: 456 SGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVI 515
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
+W ++I+G+A+HGF AL LF M +G+KP+++T + +LSACSH GL+++ ++F SM
Sbjct: 516 TWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSM 575
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+ ++ + P +HY CMVDLLGR+G L EA + +MPF+ DA W LG+CR++ T+L
Sbjct: 576 HYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKL 635
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
E AA+ I E EP + Y+LLSNLYA+ GRW DV+ +R M+ + + K TGYSW+EV N
Sbjct: 636 GEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDN 695
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+VH F VGDT HP+ +IY L+EL K+K G++ +T VLHDV +E+KE L HSEK
Sbjct: 696 QVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEK 755
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
+AVAY ++S P +PIRV KNLRVC DCH AIK+IS + GR I++RD NRFHH G CS
Sbjct: 756 IAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCS 815
Query: 774 CGDYW 778
C DYW
Sbjct: 816 CNDYW 820
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 141/318 (44%), Gaps = 28/318 (8%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----RDLVSWNVMISGYVRNKS 138
+FN+M + +S+ A+ISGY+ + Q A ++F M + +++ ++
Sbjct: 305 IFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPD 364
Query: 139 LSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
+ L K + + N++++ YA++G + AR+ F+ + EKN IS+N A
Sbjct: 365 FGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADA 424
Query: 195 YVQ--------NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+ N +E + ++S + +G VK +++ I +
Sbjct: 425 NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIH--ALIVKSGFGTN 482
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
N +I+ Y++ A ++F + ++V TWT+++SG+ ++G +A +F M E
Sbjct: 483 LCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLE 542
Query: 307 ----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-----WNTMITGYAQSGEIT 357
N V++ A+++ +D A + F +M + S + M+ +SG +
Sbjct: 543 IGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLL 602
Query: 358 HARNLFDRMP-QHDCISW 374
A + MP D + W
Sbjct: 603 EAIEFINSMPFDADALVW 620
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 124/297 (41%), Gaps = 52/297 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYN---------------------------- 96
N I + R+G + A FN + ++ +SYN
Sbjct: 388 NSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGAS 447
Query: 97 -----AMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFE 147
++SG G + Q+ + + +L N +IS Y + + AA +F
Sbjct: 448 PFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFN 507
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEE 203
M R+V++W +++SG+A++G+A A +F MLE NE+++ +L+A G I+E
Sbjct: 508 DMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDE 567
Query: 204 ACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITG- 256
A F S +S + ++ + L +A + MP D + W T +
Sbjct: 568 AWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSC 627
Query: 257 -YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+N L E A+++ E P D T+ + + Y G+ D+ + +M +K +
Sbjct: 628 RVHRNTKLGEHAAKKILEREP-HDPATYILLSNLYASEGRWDDVAALRKSMKQKKLI 683
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/694 (37%), Positives = 400/694 (57%), Gaps = 29/694 (4%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSA-------ARNLFEMMPKRDVVSWNTMLSGY 164
R + QM + L + N +S + LS A ++FE + + +++ WNTM G+
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 165 AQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML----FESKANWEV 216
A + +A ++ M+ N ++ LL + ++ E + + + ++
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
SL+ +V+ RL DA+ +FD+ RD VS+ +ITGYA Y+A AQ++F+E P+K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARE 330
DV +W AM+SGY + G EA +F M P+++T+ ++++ Q+ +++ R+
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMV--SVVSACAQSASIELGRQ 241
Query: 331 LFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ + N+ N +I Y + GE+ A LF+ + D ISW +I GY
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAGCFVG 444
+++L LF EM R GE N S+L CA+L ++E+G+ +H + K G
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
+L+ MY KCG +E A F+ I+++ + SWN MI G+A HG A +F M+ I+
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PDDIT VG+LSACSH+G+++ G F SM DY + P +HY CM+DLLG +G EA+
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEE 481
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
++ M EPD W +LL AC+++G EL E A+ + ++EP+N G YVLLSN+YA +GR
Sbjct: 482 MINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGR 541
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W +V+K+R + D+G+KKV G S +E+ + VH F +GD HP IY LEE+E L++
Sbjct: 542 WNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEE 601
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
GFV T VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A
Sbjct: 602 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 661
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKI R II RD RFHHF G CSC DYW
Sbjct: 662 TKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 226/504 (44%), Gaps = 96/504 (19%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+ ++IS Y+ NG+L+ AR+VFDQ RD+VS+ +I+GY +++A+ +F+ +P +DV
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACMLFE- 209
VSWN M+SGYA+ G A +F M++ N E + +++A Q+ IE +
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245
Query: 210 -----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+N ++V N+L+ ++K + A +F+ + +D +SWNT+I GY N
Sbjct: 246 IDDHGFGSNLKIV--NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303
Query: 265 EAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA------ 314
EA LF+E + T +++ G ++ R I + ++ NA
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+I Y + ++ A+++F+++ ++++SWN MI G+A G A ++F RM +++
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI--- 420
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
D + F +LS C++ L+LG+ +
Sbjct: 421 ------------EPDDI----------------TFVGLLSACSHSGMLDLGRHIF----- 447
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
S++E Y + + + MI G K+A
Sbjct: 448 --------------------RSMKEDYK-----ITPKLEHYGCMIDLLGHSGLFKEAE-- 480
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
E + T+ ++PD + +L AC G VE G Y ++ + P S Y + ++
Sbjct: 481 -EMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGS--YVLLSNIYA 537
Query: 555 RAGRLDEAQNL--------MKNMP 570
AGR +E + MK +P
Sbjct: 538 TAGRWNEVAKIRALLNDKGMKKVP 561
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 196/410 (47%), Gaps = 40/410 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ I+ +++NG + A VF+ R VSY A+I+GY G + A+++FD+
Sbjct: 120 DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDE 179
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAA 173
+P +D+VSWN MISGY + A LF+ M K +V + +++S AQ+ +
Sbjct: 180 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELG 239
Query: 174 RRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R++ D N N L+ Y++ G +E AC LFE + +V+SWN+L+GG+
Sbjct: 240 RQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM 299
Query: 230 KRLGDAKWIFDRMPVRDEVSWN--TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFTW- 281
+A +F M +R S N TM++ +L + ++ +K V
Sbjct: 300 NLYKEALLLFQEM-LRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS 358
Query: 282 ---TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
T+++ Y + G ++ A+ +FD++ ++ SWNAMI G+ R + A ++F M
Sbjct: 359 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 418
Query: 339 NV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSED 389
+ ++ +++ + SG + R++F M + I+ + +I SG
Sbjct: 419 EIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG---- 474
Query: 390 SLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C ++ELG+ L+K+
Sbjct: 475 ---LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKI 521
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/536 (44%), Positives = 339/536 (63%), Gaps = 38/536 (7%)
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--- 335
F +++ YV+ G + +A+ +FD MP++N VSW MI+ Y K D A E M
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 336 --------------TC-------------------KNVASWNTMITGYAQSGEITHARNL 362
C +V + +I Y++ GE+ +A +
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD M D + W++IIAG+AQ+ +++LRLF MKR G ++ TSVL C LA L
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
ELG+Q+H ++K ++ + NALL MYCKCGS+E+A F +V+KDVISW+TMIAG
Sbjct: 181 ELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A++G+ K+AL LFESMK +GIKP+ +T+VG+L ACSH GLVE+G YF+SM +G+ P
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPG 298
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CM+DLLGRAGRL EA +L+ M EPDA TW ALL ACR++ ++A AA+ I
Sbjct: 299 REHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQIL 358
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
++P++AG YVLLSN+YA + RW DV++VR M +RG+KK G SW+EV ++H F +GD
Sbjct: 359 RLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGD 418
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP+ I L +L +KL G+V T VL D+ E+ + LRYHSEKLA+ +G++S
Sbjct: 419 RSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMS 478
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+P G+ IR+ KNLR+C DCH K ++K+ R+I++RD R+HHF G CSCGD+W
Sbjct: 479 LPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 168/373 (45%), Gaps = 46/373 (12%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK--- 183
N++I+ YV+ L A+++F+ MP R+VVSW TM+S Y+ D A ML +
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 184 -NEISWNGLLAAY--VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
N +++ +L A + N R + C + + + +V ++L+ + + L +A +FD
Sbjct: 64 PNMFTYSSVLRACDGLFNLR-QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDE 296
M D V W+++I G+AQN+ EA RLF+ + T T+++ ++
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182
Query: 297 ARMIFDAMP--EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
R + + +++ + NA++ Y + ++ A +F M K+V SW+TMI G AQ
Sbjct: 183 GRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ-- 240
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+GYS+++L+LF MK G + N VL
Sbjct: 241 -----------------------------NGYSKEALKLFESMKVLGIKPNYVTIVGVLF 271
Query: 415 TCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDV 472
C++ +E G H G + G ++ + + G + EA E+ + D
Sbjct: 272 ACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDA 331
Query: 473 ISWNTMIAGYARH 485
++W ++ H
Sbjct: 332 VTWRALLNACRVH 344
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 172/432 (39%), Gaps = 63/432 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR--- 121
N+ I +++ G A VF+ MP R+ VS+ MIS Y D A + M +
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 122 ---------------------------------DLVSWNVMISGYVRNKSLSAARNLFEM 148
D+ + +I Y R L A +F+
Sbjct: 64 PNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDE 123
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA---------AYVQNG 199
M D+V W+++++G+AQN D A R+F RM ++ L A ++ G
Sbjct: 124 MVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELG 183
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
R +L K + +++ N+L+ + K L DA +F RM +D +SW+TMI G AQ
Sbjct: 184 RQVHVHVL---KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240
Query: 260 NNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---- 311
N Y EA +LFE V + T ++ G V+E F +M E +
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300
Query: 312 -WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG---YAQSGEITHARNLFDRM 366
+ MI + R+ A +L M C+ + +W ++ + HA R+
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRL 360
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D ++ + YA + D + M G + + P S + + + LG
Sbjct: 361 DPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRG--IKKEPGCSWIEVSKQIHAFILGD 418
Query: 427 QLHGQLVKVGFE 438
+ H Q+ ++ +
Sbjct: 419 RSHPQIREINIQ 430
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 42/296 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN----GQLDPARQVF 115
D+ W+ I +N D AL +F M R ++ ++ L L+ RQV
Sbjct: 128 DLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVH 187
Query: 116 DQMPQ--RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+ + +DL+ N ++ Y + SL A +F M ++DV+SW+TM++G AQNGY+ A
Sbjct: 188 VHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEA 247
Query: 174 RRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
++F+ M ++ N ++ G+L A G +EE F S
Sbjct: 248 LKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHS------------------- 288
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGY 288
K +F P R+ + MI + L+EA L E + D TW A+++
Sbjct: 289 -----MKELFGIDPGREH--YGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNAC 341
Query: 289 VQNGKVD----EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+ VD A+ I P+ + ++ + Y T+R + E+ MT + +
Sbjct: 342 RVHRNVDVAIHAAKQILRLDPQ-DAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGI 396
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/738 (36%), Positives = 400/738 (54%), Gaps = 91/738 (12%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI-- 186
+++ Y +S +R F+ +P++DV +WN+M+S Y NG+ A F ++L +EI
Sbjct: 157 LVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 216
Query: 187 ---SWNGLLAA---YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
++ +L A V RI C F+ W V SL+ + + G A+ +FD
Sbjct: 217 DFYTFPPVLKACGTLVDGRRIH--CWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK------------------------ 276
MP RD SWN MI+G QN A+A + +E ++
Sbjct: 275 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIST 334
Query: 277 ---------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
D+F A+++ Y + G +++AR F M + VSWN++IA Y Q
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ 394
Query: 322 TKRMDMARELFEAMT-----------------------CKN-----------------VA 341
A F M CKN V
Sbjct: 395 NDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV 454
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N ++ YA+ G + A +F+ + D ISW +I GYAQ+G + +++ ++ M+
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK 514
Query: 402 ERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
E + N+ + S+L A++ +L+ G ++HG+++K FV L+ +Y KCG + +A
Sbjct: 515 EIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDA 574
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F ++ + ++WN +I+ + HG + L LF M G+KPD +T V +LSACSH+
Sbjct: 575 MSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 634
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
G VE+G ++ + + ++YG+ P+ KHY CMVDLLGRAG L+ A +K+MP +PDA+ WGA
Sbjct: 635 GFVEEG-KWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGA 693
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
LLGACR++G EL + A++ +FE++ +N G YVLLSN+YA G+W V KVR R+RG+
Sbjct: 694 LLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGL 753
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGE 700
KK G+S +EV KV F G+ HP+ IY L L K+K G++ VL DV E
Sbjct: 754 KKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEE 813
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
+EKEH+L HSE+LA+A+GI+S P PIR+ KNLRVC DCHNA K IS+I R I++RD
Sbjct: 814 DEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRD 873
Query: 761 NNRFHHFSGGSCSCGDYW 778
+NRFHHF G CSCGDYW
Sbjct: 874 SNRFHHFKDGICSCGDYW 891
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 184/421 (43%), Gaps = 47/421 (11%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEA-PVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+E+ +N + + + L A V+ +F T +V+ Y G V +R FD +
Sbjct: 118 EEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQI 177
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------------TCKNVA----- 341
P+K+ +WN+MI+ YV A F + C +
Sbjct: 178 PQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRI 237
Query: 342 ---------SWNTMITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
WN + Y++ G AR+LFD MP D SW A+I+G Q+G +
Sbjct: 238 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 297
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+L + EM+ G ++N S+L C L + +H ++K G E FV NAL
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNAL 357
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY K G++E+A AF+++ DV+SWN++IA Y ++ A F M+ G +PD
Sbjct: 358 INMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDL 417
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T+V + S + + + + R ++ + +VD+ + G LD A + +
Sbjct: 418 LTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFE 477
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP-----ENAGMYVLLSNLYAAS 622
+ D +W L+ Y + LA +A EV ME N G +V + YA
Sbjct: 478 -IILVKDVISWNTLITG---YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533
Query: 623 G 623
G
Sbjct: 534 G 534
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/571 (22%), Positives = 229/571 (40%), Gaps = 156/571 (27%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-------------------------- 93
D+ WN I+ ++ NG A+ F + S +
Sbjct: 181 DVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCW 240
Query: 94 ------SYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
+N ++ L++ G AR +FD MP RD+ SWN MISG ++N + + A
Sbjct: 241 AFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 300
Query: 143 RNLFEMM-------------------PKR--------------------DVVSWNTMLSG 163
++ + M P+ D+ N +++
Sbjct: 301 LDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINM 360
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR----------------------- 200
YA+ G + AR+ F +M + +SWN ++AAY QN
Sbjct: 361 YAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTL 420
Query: 201 IEEACMLFES--------------KANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ A ++ +S + W +VV N+++ + K L A +F+ +
Sbjct: 421 VSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIL 480
Query: 244 VRDEVSWNTMITGYAQNNYLAEA---QRLFEEAP--VKDVFTWTAMVSGYVQNGKVDEAR 298
V+D +SWNT+ITGYAQN +EA ++ EE + + TW +++ Y G + +
Sbjct: 481 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGM 540
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
I + + N + ++F A TC +I Y + G +
Sbjct: 541 RIHGRVIKTN------------------LHLDVFVA-TC--------LIDVYGKCGRLVD 573
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A +LF ++PQ ++W AII+ + G++E +L+LF EM G + + F S+LS C++
Sbjct: 574 AMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH 633
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNT 477
+E GK + + G + ++ + + G +E AY +++ + D W
Sbjct: 634 SGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGA 693
Query: 478 MIAGYARHG------FGKDALMLFESMKTVG 502
++ HG F D L +S K VG
Sbjct: 694 LLGACRIHGNIELGKFASDRLFEVDS-KNVG 723
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
K LH LV G F+ L+ +Y G V + F++I KDV +WN+MI+ Y
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 484 RHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+G +A+ F + V I+PD T +L AC + + + + + V
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVA 253
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+ ++ + R G A++L +MPF D +W A++ G A +A +V+
Sbjct: 254 AS----LIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN---AAQALDVLD 305
Query: 603 EMEPENAGM-YVLLSNLYAASGRWGDVSKVRL 633
EM E M +V + ++ + GD+S L
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAML 337
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 133/311 (42%), Gaps = 24/311 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + + + G DSA VF + + +S+N +I+GY NG A +V+ M
Sbjct: 452 DVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMME 511
Query: 120 Q-RDLV----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYA 170
+ ++++ +W ++ Y +L + + K DV ++ Y + G
Sbjct: 512 ECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 571
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGF 226
A +F ++ +++ ++WN +++ + +G E+ LF + V V++ SL+
Sbjct: 572 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 631
Query: 227 VKQKRLGDAKWIFDRMP---VRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTW 281
+ + KW F M ++ + + M+ + YL A ++ P++ D W
Sbjct: 632 SHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIW 691
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNT------VSWNAMIAGYVQTKRMDMARELFEAM 335
A++ +G ++ + D + E ++ V + + A + + +D R L
Sbjct: 692 GALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARER 751
Query: 336 TCKNVASWNTM 346
K W+T+
Sbjct: 752 GLKKTPGWSTI 762
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 279/836 (33%), Positives = 413/836 (49%), Gaps = 155/836 (18%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP------- 150
++ Y G L AR+VFD+MP+RD+V+WN MI+G +++ A + F M
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 151 ----------------------------KRDVVSW--NTMLSGYAQNGYADAARRIFDRM 180
+RD S N ++ Y++ G D ARR+FD+M
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM 289
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLF-------------------------------- 208
++++++SW ++A Y NG E LF
Sbjct: 290 VDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGK 349
Query: 209 -------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ + + +++ LM + K AK +F + RD V+W+ +I Q
Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTG 409
Query: 262 YLAEAQRLFEEA----------------------------------PVK-----DVFTWT 282
Y EA LF+E VK D+ T T
Sbjct: 410 YPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGT 469
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMAREL------- 331
A+VS Y + G A F+ M ++ V+WN++I GY Q +DM +L
Sbjct: 470 ALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINP 529
Query: 332 -----------------FEAMTC-----------KNVASWNTMITGYAQSGEITHARNLF 363
+ TC + N +I YA+ G + A LF
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 364 DRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
++ D ++W IIA Y Q+G++++++ F +M+ N F SVL A LA+
Sbjct: 590 NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 649
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G H ++++GF + VGN+L+ MY KCG ++ + F E+ KD +SWN M++GY
Sbjct: 650 REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGY 709
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A HG G A+ LF M+ ++ D ++ V +LSAC H GLVE+G + F+SM+ Y + P+
Sbjct: 710 AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPD 769
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVDLLGRAG DE +K MP EPDA WGALLG+CR++ +L E A + +
Sbjct: 770 LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 829
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
++EP N +V+LS++YA SGRW D K R KM D G+KK G SW+E++NKVH F VGD
Sbjct: 830 KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD 889
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP+ + ++ L K+++ G+V VL +V EE+KE L HSE+LA+ + +L+
Sbjct: 890 KSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLN 949
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P G I+++KNLRVC DCH K ISKI R II+RD RFHHF G CSC DYW
Sbjct: 950 TPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 168/648 (25%), Positives = 284/648 (43%), Gaps = 74/648 (11%)
Query: 14 CILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMR 73
CI HQ +S + + A+ P S T +L+ P + N + H
Sbjct: 2 CIKHQLRRSFTSIATAASEFPSLSSSTYTNYLH-------YPRLLSSCKHLNPLLQIH-- 52
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
A + + S+++ +I+ Y L + D AR VFD P + WN MI Y
Sbjct: 53 ------AQIIVSGFKHHHSITH--LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAY 104
Query: 134 VRNKSLSAARNLFEMMPK---------------------------------------RDV 154
R+K + A ++ M + RDV
Sbjct: 105 TRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDV 164
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
++ Y++ G AR +FD+M +++ ++WN ++A Q+ EA F S
Sbjct: 165 FIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLV 224
Query: 215 EV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW--NTMITGYAQNNYLAEAQR 268
V VS +L G K + + I + RD S N +I Y++ + A+R
Sbjct: 225 GVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARR 284
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKR 324
+F++ +D +W M++GY NG E +FD M N VS + +T
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETID 344
Query: 325 MDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
++ +E+ + ++ ++ YA+ GE A+ LF + D ++W+AIIA
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Q+GY E++L LF EM+ + NR S+L CA+L+ L+LGK +H VK ++
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
G AL+ MY KCG A F + +D+++WN++I GYA+ G +A+ +F ++
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
I PD TMVG++ AC+ +++GT + + G + ++D+ + G L
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGT-CIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
A+ L F D TW ++ A Y + A++A +M EN
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAA---YMQNGHAKEAISSFHQMRLEN 628
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 202/480 (42%), Gaps = 78/480 (16%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ---------- 107
D D+ ++ + + G +AL FN M R V++N++I+GY G
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 108 ---------------LDPARQVFDQMPQ--------------RDLVSWNVMISGYVRNKS 138
+ PA + + + Q D N +I Y + S
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGS 581
Query: 139 LSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLL- 192
L +A LF +D V+WN +++ Y QNG+A A F +M N +++ +L
Sbjct: 582 LPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLP 641
Query: 193 -AAYV---QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
AAY+ + G AC++ + +V NSL+ + K +L ++ +F+ M +D V
Sbjct: 642 AAAYLAAFREGMAFHACIIQMGFLSNTLVG-NSLIDMYAKCGQLDYSEKLFNEMDHKDTV 700
Query: 249 SWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
SWN M++GYA + + A LF +E+ V+ D ++ +++S G V+E R IF +M
Sbjct: 701 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 760
Query: 305 PEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGY-----AQS 353
+K + + M+ + D + M + + W ++ +
Sbjct: 761 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 820
Query: 354 GEIT--HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
GE+ H L R P H + + + YAQSG D+ + +M G L ++P S
Sbjct: 821 GEVALDHLVKLEPRNPAH----FVVLSSIYAQSGRWADAGKARSKMNDLG--LKKTPGCS 874
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+ + + +G + H QL E+ + N LL K G V + + + ++D
Sbjct: 875 WVELKNKVHAFRVGDKSHPQL-----ESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED 929
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 281/794 (35%), Positives = 420/794 (52%), Gaps = 60/794 (7%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVA 67
+QLH+ ++ TQSI N + R + + K D+ WN
Sbjct: 60 KQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTK-------DVYTWNSM 112
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN--GQLDPARQVFDQMPQR---- 121
I+ + R G +A+ FN S + + ++ G LD R+V + +
Sbjct: 113 ISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFEC 172
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+ I Y R +S A NLF+ M RD+ +WN M+SG+ NG A +FD M
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLG 233
+ + ++ + LL VQ I ++ + +++ N+L+ + K L
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNN----YLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
A+ IF++M VRD VSWN+++ + QN L ++ V D+ T ++ S
Sbjct: 293 SAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAA 352
Query: 290 QNGKVDEARMIFDAMPEK-----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
+ G +R I + + + NA+I Y + +D AR++FE + K+V SWN
Sbjct: 353 ELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWN 412
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++ITGY+Q+G A +++ M + G
Sbjct: 413 SLITGYSQNGLANEAIDVYSSMRYYS------------------------------GAVP 442
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N+ + S+L+ + L +L+ G + HGQL+K FV L+ MY KCG + +A F
Sbjct: 443 NQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLF 502
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E+ + +SWN +I+ + HG+G A+ LF+ M++ G+KPD IT V +LSACSH+GLV+
Sbjct: 503 YEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVD 562
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G F M YG+ P+ KHY CMVDL GRAG L++A N +KNMP PD + WGALLGA
Sbjct: 563 EGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGA 622
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CR++ EL ++ + ++E EN G YVLLSN+YA G W V +VR RDRG+KK
Sbjct: 623 CRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTP 682
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G+S +EV K+ F G+ HP+ + IY+ L L K+K G+V VL DV ++EKE
Sbjct: 683 GWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKE 742
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
++L HSE+LA+A+GI+S P +++ KNLRVC DCHNA K ISKI R II+RD+NRF
Sbjct: 743 NILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRF 802
Query: 765 HHFSGGSCSCGDYW 778
HHF G CSCGDYW
Sbjct: 803 HHFKDGVCSCGDYW 816
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 10/209 (4%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+ L KQLH LV G F+ L+ Y G + A F++I KDV +WN+MI+
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 482 YARHGFGKDALMLF-ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
YAR G A+ F E + T ++ D T ++ AC G ++ G + + + G
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRK-VHCLVLKLGFE 171
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
+ + R G + A NL NM D TW A++ L GK +A EV
Sbjct: 172 CDVYIAASFIHFYSRFGFVSLACNLFDNMMIR-DIGTWNAMISGFYLNGKV---AEALEV 227
Query: 601 IFEMEPENAGM-YVLLSNLYAASGRWGDV 628
EM ++ M V +S+L + D+
Sbjct: 228 FDEMRFKSVSMDSVTISSLLPICVQLDDI 256
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 278/839 (33%), Positives = 424/839 (50%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISG-----------------YLLNGQ 107
N I + RNG D A VF+ + + S+ AMISG Y+L
Sbjct: 186 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 245
Query: 108 LDP--------------ARQVFDQMP--------QRDLVSWNVMISGYVRNKSLSAARNL 145
P + ++ +Q+ D N ++S Y +L +A ++
Sbjct: 246 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 305
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M +RD V++NT+++G +Q GY + A +F RM LE + + L+ A +G +
Sbjct: 306 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 365
Query: 202 EEACMLFESKANWEVVSWNSLMGG----FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
L S N + G + K + A F V + V WN M+ Y
Sbjct: 366 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 425
Query: 258 AQNNYLAEAQRLFEEAPVKDV--------------------------------------- 278
+ L + R+F + ++++
Sbjct: 426 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 485
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+ + ++ Y + GK+D A I K+ VSW MIAGY Q D A F M +
Sbjct: 486 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 545
Query: 339 NVAS---------------------------------------WNTMITGYAQSGEITHA 359
+ S N ++T Y++ G+I +
Sbjct: 546 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 605
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F++ D I+W A+++G+ QSG +E++LR+F+ M R G N F S + +
Sbjct: 606 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 665
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++ GKQ+H + K G+++ V NAL+ MY KCGS+ +A F E+ K+ +SWN +I
Sbjct: 666 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 725
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
Y++HGFG +AL F+ M ++P+ +T+VG+LSACSH GLV+KG YF SMN +YG+
Sbjct: 726 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 785
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P +HY C+VD+L RAG L A+ ++ MP +PDA W LL AC ++ E+ E AA
Sbjct: 786 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 845
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPE++ YVLLSNLYA S +W R KM+++GVKK G SW+EV+N +H+F
Sbjct: 846 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 905
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD HP D I+ Y ++L + + G+V +L+++ E+K+ ++ HSEKLA+++G
Sbjct: 906 VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 965
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+PA PI VMKNLRVC DCH IK +SK+ R II+RD RFHHF GG+CSC DYW
Sbjct: 966 LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 235/558 (42%), Gaps = 76/558 (13%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML 161
YL G L A +VFD+MP+R + +WN MI + LF M +V
Sbjct: 90 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 149
Query: 162 SGYAQNGYA-----DAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKA 212
SG + D +I R+L + + + N L+ Y +NG ++ A +F+
Sbjct: 150 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 209
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL--- 269
+ SW +++ G K + +A +F M V M T YA ++ L+ +++
Sbjct: 210 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYV-----LGIMPTPYAFSSVLSACKKIESL 264
Query: 270 ----------FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+ D + A+VS Y G + A IF M +++ V++N +I G
Sbjct: 265 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL 324
Query: 320 VQTKRMDMARELFEAM----------------------------------TCKNVASWNT 345
Q + A ELF+ M T K + N
Sbjct: 325 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 384
Query: 346 MITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
I G YA+ +I A + F + + W ++ Y +S R+F +M+
Sbjct: 385 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 444
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
N+ + S+L TC L LELG+Q+H Q++K F+ +V + L+ MY K G ++ A
Sbjct: 445 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 504
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
+ KDV+SW TMIAGY ++ F AL F M GI+ D++ + +SAC+
Sbjct: 505 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 564
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP----DAA 576
+++G + ++ G + +V L R G+++E+ + FE D
Sbjct: 565 QALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNI 618
Query: 577 TWGALLGACRLYGKTELA 594
W AL+ + G E A
Sbjct: 619 AWNALVSGFQQSGNNEEA 636
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 170/714 (23%), Positives = 300/714 (42%), Gaps = 110/714 (15%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
R S+V N +I Y NG +D AR+VFD + +D SW MISG +N+ + A LF
Sbjct: 179 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF-- 236
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRI-------------FDRMLEKNEISWNGLLAAY 195
D+ M + YA + A ++I + N L++ Y
Sbjct: 237 ---CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 293
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI 254
G + A +F + + + V++N+L+ G + A +F RM + E NT+
Sbjct: 294 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 353
Query: 255 T------------------------GYAQNNY--------------LAEAQRLFEEAPVK 276
+ G+A NN + A F E V+
Sbjct: 354 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 413
Query: 277 DVFTWTAMVSGYVQNGKVDEAR---MIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR 329
+V W M+ Y G +D+ R IF M + N ++ +++ ++ +++
Sbjct: 414 NVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 470
Query: 330 ELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ + N + +I YA+ G++ A ++ R D +SW +IAGY Q
Sbjct: 471 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 530
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ + +L F +M G R + T+ +S CA L +L+ G+Q+H Q GF + N
Sbjct: 531 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 590
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ +Y +CG +EE+Y AFE+ D I+WN +++G+ + G ++AL +F M GI
Sbjct: 591 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 650
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
++ T + A S T +++G + + + G ++ ++ + + G + +A+
Sbjct: 651 NNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQ 709
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA-GMYVLLSNLYAASGR 624
+ + +W A++ A Y K +A + +M N +V L + +A
Sbjct: 710 FLEVS-TKNEVSWNAIINA---YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 765
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNK--------VHTFSVGDTLHPEK--DRIYAY 674
G V K G ++ E N H V D L R +
Sbjct: 766 IGLVDK--------------GIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 811
Query: 675 LEELEFKLKQDGFVYSTKL---VLH---DVGEEEKEHMLRYHSEKLAVAYGILS 722
++E+ +K D V+ T L V+H ++GE H+L E A Y +LS
Sbjct: 812 IQEM--PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA-TYVLLS 862
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 209/441 (47%), Gaps = 51/441 (11%)
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR- 324
A ++F+E P + +FTW M+ + E +F M +N +G ++ R
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 325 ----MDM-----ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
D+ AR L++ + V N +I Y+++G + AR +FD + D SW
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 217
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+I+G +++ +++RLF +M G F+SVLS C + SLE+G+QLHG ++K+
Sbjct: 218 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 277
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
GF + +V NAL+ +Y G++ A H F + +D +++NT+I G ++ G+G+ A+ LF
Sbjct: 278 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 337
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ M G++PD T+ ++ ACS G + +G + ++ G N+K +++L +
Sbjct: 338 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAK 396
Query: 556 A----------------------------GRLDEAQN---LMKNMPFE---PDAATWGAL 581
G LD+ +N + + M E P+ T+ ++
Sbjct: 397 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 456
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
L C G EL E+ I + + NA + +L ++YA G+ + ++ + V
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 516
Query: 641 ----KKVTGYSWLEVQNKVHT 657
+ GY+ +K T
Sbjct: 517 VSWTTMIAGYTQYNFDDKALT 537
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 22/324 (6%)
Query: 305 PEKNTVSWNAMIAGYVQTK-RMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHA 359
P T+ W ++ G ++T +D R+L + + S + Y G++ A
Sbjct: 42 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-AN 418
+FD MP+ +W +I A + LF+ M N F+ VL C
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+ ++ +Q+H +++ G V N L+ +Y + G V+ A F+ + KD SW M
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 219
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I+G +++ +A+ LF M +GI P +LSAC +E G E + + G
Sbjct: 220 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLG 278
Query: 539 VIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+S Y C +V L G L A+++ NM + DA T+ L+ G EK
Sbjct: 279 F--SSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG---YGEK 332
Query: 597 AAEVIFEM-----EPENAGMYVLL 615
A E+ M EP++ + L+
Sbjct: 333 AMELFKRMHLDGLEPDSNTLASLV 356
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 401 GERLNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G R N +L C SL+ G++LH Q++K+G ++ + L Y G +
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A+ F+E+ ++ + +WN MI A + LF M + + P++ T G+L AC
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 520 TGLVEKGTE-----YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ E Y RD V+ N ++DL R G +D A+ + + + D
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNP-----LIDLYSRNGFVDLARRVFDGLRLK-D 212
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEM 604
++W A++ K E +A + +M
Sbjct: 213 HSSWVAMISG---LSKNECEAEAIRLFCDM 239
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 139/336 (41%), Gaps = 63/336 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N +T + R G + + F ++++NA++SG+ +G + A +VF +M
Sbjct: 585 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 644
Query: 120 QRDLVS---------------------------------------WNVMISGYVRNKSLS 140
+ + + N +IS Y + S+S
Sbjct: 645 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 704
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
A F + ++ VSWN +++ Y+++G+ A FD+M+ N ++ G+L+A
Sbjct: 705 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 764
Query: 197 QNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G +++ FES + +S + ++ + L AK MP++ D + W
Sbjct: 765 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 824
Query: 251 NTMITGYA--QNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
T+++ +N + E A L E P +D T+ + + Y + K D + M E
Sbjct: 825 RTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVSKKWDARDLTRQKMKE 883
Query: 307 KNT-----VSW----NAMIAGYVQTKRMDMARELFE 333
K SW N++ + YV + +A E+ E
Sbjct: 884 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 919
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 268/692 (38%), Positives = 402/692 (58%), Gaps = 42/692 (6%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKR---DVVSWNTMLSGYAQNGYADAARRIFDRM--- 180
N +++ Y R +L A +F+ + +R D+VSWN++L+ Y Q G + A RI RM
Sbjct: 166 NSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNH 225
Query: 181 ----LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
L + I+ +L A +Q+G+ + + +V N+L+ + K +
Sbjct: 226 YSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVD-DVFVGNALVSMYAKCSK 284
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSG 287
+ +A +F+ + +D VSWN M+TGY+Q A LF +E +K DV TW+A+++G
Sbjct: 285 MNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAG 344
Query: 288 YVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS- 342
Y Q G EA +F M E N V+ ++++G + ++ A KN+ +
Sbjct: 345 YAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQT-HAYVIKNILNL 403
Query: 343 -WNT----------MITGYAQSGEITHARNLFDRMPQHD--CISWAAIIAGYAQSGYSED 389
WN +I YA+ AR++FD + D ++W +I GYAQ G + D
Sbjct: 404 NWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEAND 463
Query: 390 SLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGC-FVGNA 446
+L+LF ++ + L + FT L CA L L LG+QLH ++ E+ +VGN
Sbjct: 464 ALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNC 523
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY K G ++ A F+ + ++V+SW +++ GY HG G++AL LF+ M+ +G D
Sbjct: 524 LIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVD 583
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT + +L ACSH+G+V++G YF+ M + +G+ P ++HY CMVDLLGRAGRL+EA L+
Sbjct: 584 GITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELI 643
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
KNM EP A W ALL A R++ EL E AA + E+ EN G Y LLSNLYA + RW
Sbjct: 644 KNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWK 703
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DV+++R M+ G++K G SW++ + TF VGD HPE ++IY L +L ++K G
Sbjct: 704 DVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMG 763
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T LHDV +EEK +L HSEKLAVAYGIL+ G+PIR+ KNLR+C DCH+A+
Sbjct: 764 YVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALT 823
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+IS I+ I+LRD++RFHHF GSCSC YW
Sbjct: 824 YISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/504 (24%), Positives = 212/504 (42%), Gaps = 102/504 (20%)
Query: 192 LAAYVQNGRIEEACMLFES--KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VR 245
+ AY++ G EA L + ++ V WN+L+ VK L D + +M +
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIF 301
D ++ ++ + L + +VF ++V+ Y + G +D+A +F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 302 DAMPEK---NTVSWNAMIAGYVQTKRMDMARELF-------------EAMTCKNVAS--- 342
D + E+ + VSWN+++A YVQ + A + +A+T N+
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 343 --------------------------WNTMITGYAQSGEITHARNLFDRMPQHDCIS--- 373
N +++ YA+ ++ A +F+ + + D +S
Sbjct: 246 SVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNA 305
Query: 374 --------------------------------WAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
W+A+IAGYAQ G+ ++L +F +M+ YG
Sbjct: 306 MVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYG 365
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF-------EAGCFVGNALLVMYCKC 454
N S+LS CA++ +L GKQ H ++K E V N L+ MY KC
Sbjct: 366 LEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKC 425
Query: 455 GSVEEAYHAFEEI--VDKDVISWNTMIAGYARHGFGKDALMLFESM--KTVGIKPDDITM 510
S A F+ I DK+V++W MI GYA+HG DAL LF + + +KP+ T+
Sbjct: 426 KSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTL 485
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
L AC+ G + G + R+ C++D+ ++G +D A+ + NM
Sbjct: 486 SCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMK 545
Query: 571 FEPDAATWGALLGACRLYGKTELA 594
+ +W +L+ ++G+ E A
Sbjct: 546 LR-NVVSWTSLMTGYGMHGRGEEA 568
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 140/276 (50%), Gaps = 13/276 (4%)
Query: 347 ITGYAQSGEITHARNLFDRM-PQHDCISW-AAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+ Y + G A +L R+ P H + W A+I + G +D+L + +M+R G
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ F VL C + SL G +H + G + F+ N+++ MY +CG++++A+ F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 465 EEIVDK---DVISWNTMIAGYARHGFGKDALMLFESMK---TVGIKPDDITMVGILSACS 518
+E++++ D++SWN+++A Y + G + AL + M ++ ++PD IT+V IL AC+
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
++ G + + + G++ + +V + + +++EA + + + + D +W
Sbjct: 246 SVFALQHGKQ-VHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK-KKDVVSW 303
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
A++ Y + + A + M+ E+ + V+
Sbjct: 304 NAMVTG---YSQIGSFDSALSLFKMMQEEDIKLDVI 336
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 287/833 (34%), Positives = 429/833 (51%), Gaps = 129/833 (15%)
Query: 75 GCCDSALH---VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----------- 120
G C S L +F+ M RS ++NAM+ GY+ NG+ A +++ +M
Sbjct: 3 GKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFP 62
Query: 121 ---------RDLVSW-------------------NVMISGYVRNKSLSAARNLFEMMPKR 152
DL N +++ Y + ++ AR LF+ M R
Sbjct: 63 VLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVR 122
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR--------IEE 203
DVVSWN+++S Y+ NG A +F ML+ ++ AA +Q ++
Sbjct: 123 NDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQI 182
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ +S +V N+L+ +V+ ++ +A IF + +D V+WN+M+TG+ QN
Sbjct: 183 HAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLY 242
Query: 264 AEAQRLFEEAPVKD-----VFTWTAMVS----GYVQNGKVDEARMI-------------- 300
+EA F + D V + +V+ GY+ NGK A I
Sbjct: 243 SEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTL 302
Query: 301 ----------------FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--------- 335
FD M K+ +SW AGY Q K A EL +
Sbjct: 303 IDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDA 362
Query: 336 --------TCKNVASW---------------------NTMITGYAQSGEITHARNLFDRM 366
C+ + NT+I Y + G I +A +F+ +
Sbjct: 363 TMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESI 422
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D +SW ++I+ Y +G + +L +F MK G + S+LS +L++L+ GK
Sbjct: 423 ECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGK 482
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
++HG +++ GF + N L+ MY +CGSVE+AY F ++++I W MI+ Y HG
Sbjct: 483 EIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHG 542
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+G+ A+ LF MK I PD IT + +L ACSH+GLV +G + M +Y + P +HY
Sbjct: 543 YGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHY 602
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
TC+VDLLGR L+EA ++K+M EP W ALLGACR++ E+ E AAE + E++
Sbjct: 603 TCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDL 662
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+N G YVL+SN++AA+GRW DV +VR++M+ G+ K G SW+EV NK+H F D LHP
Sbjct: 663 DNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHP 722
Query: 667 EKDRIYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
E D+IY L ++ KLK++ G+V TK VLH+VGEEEK ML HSE+LA+AYG+L+
Sbjct: 723 ECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAE 782
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIRV KNLRVC DCH+ +S+ R +I+RD +RFHHF G CSCGD+W
Sbjct: 783 GTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 160/586 (27%), Positives = 248/586 (42%), Gaps = 109/586 (18%)
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM------------ 180
Y + S+ A +F+ M +R + +WN M+ GY NG A A ++ M
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
L+ I + A + I+ C F V NSL+ + K + A+
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSF-------VFVVNSLVALYAKCNDINGARK 114
Query: 238 IFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEE------------------------ 272
+FDRM VR D VSWN++I+ Y+ N EA LF E
Sbjct: 115 LFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSS 174
Query: 273 ---------------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
V DV+ A+V+ YV+ GK+ EA +IF + K+ V+WN+M+
Sbjct: 175 FIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLT 234
Query: 318 GYVQTKRMDMARELF----------------------------------EAMTCK----- 338
G++Q A E F A K
Sbjct: 235 GFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDS 294
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
N+ NT+I YA+ +++ FD M D ISW AGYAQ+ +L L +++
Sbjct: 295 NILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQ 354
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G ++ + S+L C L L K++HG ++ G + N ++ +Y +CG ++
Sbjct: 355 MEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDP-VLQNTIIDVYGECGIID 413
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A FE I KDV+SW +MI+ Y +G AL +F SMK G++PD +T+V ILSA
Sbjct: 414 YAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVC 473
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
++KG E + R ++ S T +VD+ R G +++A + + W
Sbjct: 474 SLSTLKKGKEIHGFIIRKGFILEGSISNT-LVDMYARCGSVEDAYKIFTCTK-NRNLILW 531
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYAAS 622
A++ A YG E A E+ M+ E L+ LYA S
Sbjct: 532 TAMISA---YGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACS 574
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 185/462 (40%), Gaps = 93/462 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVS------------------------- 94
D+ WN I+ + NG C AL +F+ M + V+
Sbjct: 124 DVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIH 183
Query: 95 --------------YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
NA+++ Y+ G++ A +F + +D+V+WN M++G+++N S
Sbjct: 184 AAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYS 243
Query: 141 AARNLF------EMMPKR---------------------------------DVVSWNTML 161
A F ++ P + +++ NT++
Sbjct: 244 EALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLI 303
Query: 162 SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
YA+ R FD M K+ ISW A Y QN +A L + +
Sbjct: 304 DMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDAT 363
Query: 222 LMGGFVKQKR----LGDAKWIFD---RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
++G + R LG K I R + D V NT+I Y + + A R+FE
Sbjct: 364 MIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIE 423
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARE 330
KDV +WT+M+S YV NG ++A +F +M E + V+ ++++ + +E
Sbjct: 424 CKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKE 483
Query: 331 LFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ + K + NT++ YA+ G + A +F + I W A+I+ Y GY
Sbjct: 484 IHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGY 543
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
E ++ LF+ MK + F ++L C++ + GK
Sbjct: 544 GEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSF 585
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCGSV +A F+++ ++ + +WN M+ GY +G AL ++ M+ +G+ D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 510 MVGILSACSHTGLVEK---GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+L AC G+VE G E + + YG +V L + ++ A+ L
Sbjct: 61 FPVLLKAC---GIVEDLFCGAE-IHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLF 116
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
M D +W +++ A Y + +A + EM AG+ AA
Sbjct: 117 DRMYVRNDVVSWNSIISA---YSGNGMCTEALCLFSEM--LKAGVVTNTYTFAAALQACE 171
Query: 627 DVSKVRLKMRDRGVKKVTGYSW-LEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
D S ++L M+ +G + V N + V PE I+ LE
Sbjct: 172 DSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLE 222
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/621 (38%), Positives = 364/621 (58%), Gaps = 39/621 (6%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N L+ + + +AC +F + + VSWNS++ G+++ + +AK I+ +MP R +
Sbjct: 252 NTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSII 311
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM---- 304
+ N+MI + + EA +LF+E KD+ TW+A+++ + QN +EA F M
Sbjct: 312 ASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIG 371
Query: 305 ---PEKNTVS--------------------------------WNAMIAGYVQTKRMDMAR 329
E VS NA+I Y + + +AR
Sbjct: 372 VMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVAR 431
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+LF+ ++ SWN+MI+GY + + +A+ +FD MP+ D +SW+++I+GYAQ+ ++
Sbjct: 432 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 491
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L LF EM+ G + + + SV+S CA LA+LE GK +H + + G +G L+
Sbjct: 492 TLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLID 551
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCG VE A F +++K + +WN +I G A +G + +L +F +MK + P++IT
Sbjct: 552 MYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEIT 611
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+G+L AC H GLV++G +FYSM D+ + PN KHY CMVDLLGRAG+L EA+ L+ M
Sbjct: 612 FMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRM 671
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
P PD ATWGALLGAC+ +G +E+ + + E++P++ G +VLLSN+YA+ G+W DV
Sbjct: 672 PMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVL 731
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
++R M V K+ G S +E +H F GD HP+ D I L E+ KLK +G+
Sbjct: 732 EIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTP 791
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
VL DV EEEKE L HSEKLA+A+G+++I PIR+MKNLR+C DCH A K IS
Sbjct: 792 DINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLIS 851
Query: 750 KIVGRLIILRDNNRFHHFSGG 770
K R I++RD +RFHHF G
Sbjct: 852 KAFCRKIVVRDRHRFHHFEQG 872
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 213/451 (47%), Gaps = 71/451 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I+ + + + A +VF++ D VSWN +++GY+ ++ A++++ MP+R ++
Sbjct: 252 NTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSII 311
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF------- 208
+ N+M+ + G A ++FD MLEK+ ++W+ L+A + QN EEA F
Sbjct: 312 ASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIG 371
Query: 209 ------------ESKANWEVVSW--------------------NSLMGGFVKQKRLGDAK 236
+ AN VV+ N+L+ + K + A+
Sbjct: 372 VMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVAR 431
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+FD + D +SWN+MI+GY + N + A+ +F+ P KDV +W++M+SGY QN DE
Sbjct: 432 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 491
Query: 297 ARMIFDAM------PEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
+F M P++ T +S A +A Q K + A +T NV T+
Sbjct: 492 TLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVH-AYIKRNGLTI-NVILGTTL 549
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I Y + G + A +F M + +W A+I G A +G E SL +F MK+ N
Sbjct: 550 IDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNE 609
Query: 407 SPFTSVLSTCANLASLELGKQ-----LHGQLVKVGFEA-GCFVGNALLVMYCKCGSVEEA 460
F VL C ++ ++ G+ +H ++ + GC V + + G ++EA
Sbjct: 610 ITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVD-----LLGRAGKLQEA 664
Query: 461 YHAFEEIVDK-----DVISWNTMIAGYARHG 486
EE++++ DV +W ++ +HG
Sbjct: 665 ----EELLNRMPMTPDVATWGALLGACKKHG 691
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 141/307 (45%), Gaps = 41/307 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA+I Y G + AR++FD+ DL+SWN MISGY++ + A+ +F+ MP++DVV
Sbjct: 415 NALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVV 474
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
SW++M+SGYAQN D +F M + +E + +++A + +E+
Sbjct: 475 SWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQ-------- 526
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
W + ++K+ L + + T+I Y + + A +F
Sbjct: 527 GKW--------VHAYIKRNGL-----------TINVILGTTLIDMYMKCGCVETALEVFY 567
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDM 327
K + TW A++ G NG V+ + +F M + N +++ ++ +D
Sbjct: 568 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 627
Query: 328 ARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQH-DCISWAAIIAGY 381
+ F +M NV + M+ ++G++ A L +RMP D +W A++
Sbjct: 628 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 687
Query: 382 AQSGYSE 388
+ G SE
Sbjct: 688 KKHGDSE 694
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
I N I + + G A +F+ +S+N+MISGYL +D A+ +FD MP+
Sbjct: 411 INLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPE 470
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMP------------------------------ 150
+D+VSW+ MISGY +N LF+ M
Sbjct: 471 KDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWV 530
Query: 151 ----KRDVVSWN-----TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
KR+ ++ N T++ Y + G + A +F M+EK +WN L+ NG +
Sbjct: 531 HAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLV 590
Query: 202 EEACMLFESKANWEV----VSWNSLMG-----GFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
E + +F + V +++ ++G G V + + I D + +
Sbjct: 591 ESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGC 650
Query: 253 MITGYAQNNYLAEAQRLFEEAPV-KDVFTWTAMVSGYVQNGKVDEARMI 300
M+ + L EA+ L P+ DV TW A++ ++G + R +
Sbjct: 651 MVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 699
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 44/180 (24%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
KQ+H ++K+GF++ +V N L+ + C ++ +A F E D +SWN+++AGY
Sbjct: 232 AKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIE 291
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
G VE+ ++ M + NS
Sbjct: 292 -----------------------------------IGNVEEAKHIYHQMPERSIIASNS- 315
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
M+ L G G + EA L M E D TW AL+ AC + + E+ E+A M
Sbjct: 316 ----MIVLFGMRGLVVEACKLFDEM-LEKDMVTWSALI-AC--FQQNEMYEEAIRTFVGM 367
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/603 (40%), Positives = 353/603 (58%), Gaps = 47/603 (7%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---------- 271
LM + Q A++IFDR ++ V +N MI Y NN EA +F+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 272 ------------------------EAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFD 302
+A VK ++F A+V+ Y + G + EAR + D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-------ASWNTMITGYAQSGE 355
MP ++ VSWN+M+AGY Q+ + D A E+ + M N+ AS + ++ Y
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC-YTSLEN 255
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ + N+F+RM + + ISW +IA Y + +++ LF++M+ G + + S+L
Sbjct: 256 VQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C +L++L LG++LH + K + NALL MY KCG +EEA F+++ +DV+SW
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSW 375
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+M++ Y R G G DA+ LF M G PD I V +LSACSHTGL+++G YF M
Sbjct: 376 TSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTE 435
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
YG++P +H+ CMVDL GRAG ++EA + +K MP EP+ WGALL ACR++ K ++
Sbjct: 436 QYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGL 495
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AA+++F++ P+ +G YVLLSN+YA +G W DV VR M+ G+KKV G S +E+ +V
Sbjct: 496 VAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQV 555
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
HTF GD HP+ IY L+ L K+K+ G++ T+ LHDV E+KE L HSEKLA
Sbjct: 556 HTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLA 615
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+ + IL+ G PIR+ KNLRVC DCH AIK ISKIV R II+RD NRFHHFS G CSCG
Sbjct: 616 IVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCG 675
Query: 776 DYW 778
DYW
Sbjct: 676 DYW 678
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 191/435 (43%), Gaps = 84/435 (19%)
Query: 3 GNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSK--KTLKRHLNSKSRNKPKPAGDWD 60
G L +LHS ++++H + I+ + Y ++ ++ R++ +S K +
Sbjct: 50 GIKTLNKLHSKIVINEHLR-IDPTLAIKLMRAYSAQGETSVARYIFDRSLEK-------N 101
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVFD 116
+ +NV I +++ N AL +F M + ++ ++ L QV D
Sbjct: 102 VVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHD 161
Query: 117 QMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+ + +L N +++ Y + L AR + + MP RDVVSWN+M++GYAQ+G D
Sbjct: 162 AIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDD 221
Query: 173 ARRI-------------------------------------FDRMLEKNEISWNGLLAAY 195
A I F+RM +KN ISWN ++A Y
Sbjct: 222 ALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIY 281
Query: 196 VQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIF---------DRM 242
V N EA LF E + V+ SL+ GD +F ++
Sbjct: 282 VNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA------CGDLSALFLGRRLHKYIEKG 335
Query: 243 PVRDEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
+R + N ++ YA+ L EA+ +F++ ++DV +WT+M+S Y ++G+ +A +F
Sbjct: 336 NLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALF 395
Query: 302 DAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQ 352
M + +++++ ++++ T +D R F MT + + M+ + +
Sbjct: 396 AKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGR 455
Query: 353 SGEITHARNLFDRMP 367
+GE+ A + +MP
Sbjct: 456 AGEVEEAYSFIKQMP 470
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/746 (35%), Positives = 419/746 (56%), Gaps = 31/746 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + T+M+ +VF+ M R+ V++ +ISGY N + +F +M
Sbjct: 131 DVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQ 190
Query: 120 QRDL--------VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ V+ V + L + + + + N++++ Y + G
Sbjct: 191 DEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 250
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNG-RIEEACMLFESKANWEVVSWNSLMG------ 224
AR +FD+ K+ ++WN +++ Y NG +E M + + N +S +S
Sbjct: 251 KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCA 310
Query: 225 -----GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP-VKDV 278
F +Q K+ F V D+ ++ Y++ + +A RLF+E + +V
Sbjct: 311 NLKELRFTEQLHCSVVKYGF----VFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNV 366
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEA 334
+WTAM+SG++QN +EA +F M K N +++ ++ ++ ++ +
Sbjct: 367 VSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKT 426
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
++ ++ Y + G++ A +F + D ++W+A++AGYAQ+G +E ++++F
Sbjct: 427 NYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIF 486
Query: 395 IEMKRYGERLNRSPFTSVLSTCA-NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
E+ + G + N F+S+L+ CA AS+ GKQ HG +K ++ V +ALL MY K
Sbjct: 487 SELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 546
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
G +E A F+ +KD++SWN+MI+GYA+HG AL +F+ MK +K D +T +G+
Sbjct: 547 KGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGV 606
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
+AC+H GLVE+G +YF M RD + P +H +CMVDL RAG+L++A ++ NMP
Sbjct: 607 FAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLA 666
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+ W +L ACR++ KTEL AAE I M PE++ YVLLSN+YA SG W + +KVR
Sbjct: 667 GSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRK 726
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M +R VKK GYSW+EV+NK + F GD HP KD+IY LE+L +LK G+ T
Sbjct: 727 LMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSY 786
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
VL D+ +E KE +L HSE+LA+A+G+++ P G P+ ++KNLRVC DCH IK I+KI
Sbjct: 787 VLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEE 846
Query: 754 RLIILRDNNRFHHFSG-GSCSCGDYW 778
R I++RD+NRFHHFS G CSCGD+W
Sbjct: 847 REIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 142/589 (24%), Positives = 253/589 (42%), Gaps = 100/589 (16%)
Query: 132 GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF----------DRML 181
G + L A NLF+ P RD S+ ++L G++++G A R+F D +
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ + + L + ++ C+ F + V SL+ ++K D + +FD
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSV--GTSLVDTYMKGSNFKDGRNVFDE 157
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTA-------------- 283
M R+ V+W T+I+GYA+N+ E LF +E + FT+ A
Sbjct: 158 MKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRG 217
Query: 284 ---------------------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
+++ Y++ G V +AR++FD K+ V+WN+MI+GY
Sbjct: 218 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 323 KRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQH----DCISW 374
A +F +M +V +S+ ++I A E+ L + ++ D
Sbjct: 278 GLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIR 337
Query: 375 AAIIAGYAQSGYSEDSLRLF--------------------------------IEMKRYGE 402
A++ Y++ D+LRLF EMKR G
Sbjct: 338 TALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGV 397
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
R N ++ +L+ ++ E +H Q+VK +E VG ALL Y K G V+EA
Sbjct: 398 RPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAK 453
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F I +KD+++W+ M+AGYA+ G + A+ +F + G+KP++ T IL+ C+ T
Sbjct: 454 VFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTA 513
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ F+ + + + ++ + + G ++ A+ + K E D +W +++
Sbjct: 514 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQR-EKDLVSWNSMI 572
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWGDVSK 630
+G+ A KA +V EM+ M V ++AA G V +
Sbjct: 573 SGYAQHGQ---AMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEE 618
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/694 (36%), Positives = 404/694 (58%), Gaps = 34/694 (4%)
Query: 111 ARQVFDQMPQRDLVS---WNVMISGYVRNKSLSAARNLFEMMPKR-DVVSWNTMLSGYAQ 166
A+Q+ Q+ + L S + ++S Y L + +F +P ++W +++ Y
Sbjct: 24 AKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTS 83
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--------KANWEVVS 218
+G + F +ML + + + + +++ + + ES +++ +
Sbjct: 84 HGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYT 143
Query: 219 WNSLMGGFVK---QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
N+LM + K + + K +FD D S ++ YL +++FE P
Sbjct: 144 CNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKE-----KESYYLGSLRKVFEMMPK 198
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIF------DAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+D+ +W ++SG QNG ++A M+ D P+ T+S +++ + + + +
Sbjct: 199 RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLS--SVLPIFAEYVNLLKGK 256
Query: 330 ELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
E+ +N V +++I YA+ + + +F +PQHD ISW +IIAG Q+
Sbjct: 257 EI-HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 315
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G ++ L+ F +M + N F+S++ CA+L +L LGKQLHG +++ F+ F+
Sbjct: 316 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA 375
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
+AL+ MY KCG++ A F+++ D++SW MI GYA HG DA+ LF+ M+ G+K
Sbjct: 376 SALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVK 435
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
P+ + + +L+ACSH GLV++ +YF SM +DY +IP +HY + DLLGR GRL+EA
Sbjct: 436 PNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYE 495
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
+ +M EP + W LL ACR++ ELAEK ++ +F ++P+N G YVLLSN+Y+A+GR
Sbjct: 496 FISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGR 555
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W D K+R+ MRD+G+KK SW+E++NKVH F GD HP DRI L+ L ++++
Sbjct: 556 WKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMER 615
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G+V T VLHDV EE+K ++L HSE+LA+ +GI+S PAG IRV KNLRVC DCH A
Sbjct: 616 EGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTA 675
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKIVGR I++RDN+RFHHF G CSCGD+W
Sbjct: 676 TKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 163/382 (42%), Gaps = 62/382 (16%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL------------------- 123
VF MP+R VS+N +ISG NG + A + +M DL
Sbjct: 192 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 251
Query: 124 --------------------VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
+ +I Y + + + +F M+P+ D +SWN++++G
Sbjct: 252 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAG 311
Query: 164 YAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACML----FESKANWE 215
QNG D + F +ML + N +S++ ++ A + L S+ +
Sbjct: 312 CVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGN 371
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
V ++L+ + K + A+WIFD+M + D VSW MI GYA + + +A LF+ V
Sbjct: 372 VFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEV 431
Query: 276 KDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMD 326
+ V + A+++ G VDEA F++M + + + A+ + R++
Sbjct: 432 EGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLE 491
Query: 327 MARELFEAMTCKNVAS-WNTMITGYAQSGEITHA----RNLFDRMPQHDCISWAAIIAGY 381
A E M + S W+T++ I A + LF PQ + ++ + Y
Sbjct: 492 EAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ-NIGAYVLLSNIY 550
Query: 382 AQSGYSEDSLRLFIEMKRYGER 403
+ +G +D+ +L I M+ G +
Sbjct: 551 SAAGRWKDARKLRIAMRDKGMK 572
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 54/283 (19%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQ----------- 120
D + VF +P+ +S+N++I+G + NG D + F QM P
Sbjct: 288 DDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPAC 347
Query: 121 -----------------RDLVSWNVMISG-----YVRNKSLSAARNLFEMMPKRDVVSWN 158
R NV I+ Y + ++ AR +F+ M D+VSW
Sbjct: 348 AHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWT 407
Query: 159 TMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKA-N 213
M+ GYA +G+A A +F RM ++ N +++ +L A G ++EA F S +
Sbjct: 408 AMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQD 467
Query: 214 WEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE- 265
+ ++ + ++ + RL +A M + S W+T++ +N LAE
Sbjct: 468 YRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEK 527
Query: 266 -AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+++LF P +++ + + + Y G+ +AR + AM +K
Sbjct: 528 VSKKLFTVDP-QNIGAYVLLSNIYSAAGRWKDARKLRIAMRDK 569
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 274/775 (35%), Positives = 418/775 (53%), Gaps = 101/775 (13%)
Query: 103 LLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLS 162
LL G+ AR V +S N +++ Y + SLS+AR +F+ P+RD+V+WN +L
Sbjct: 93 LLLGKCTHARIVVSGSAGDHFLS-NNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 151
Query: 163 GYA-----QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM---------LF 208
YA +G A +F R+L + S + A V + C+
Sbjct: 152 AYAASVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 210
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
+ W+V +L+ + K R+ DA+ +FD M RD V WN M+ GY Q EA +
Sbjct: 211 KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQ 270
Query: 269 LFEE------------------------------------APVK-----DVFTWTAMVSG 287
LF E VK DV ++V+
Sbjct: 271 LFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNM 330
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF--------------- 332
Y + G AR +F+ M + +SWN+MI+ Q+ + + LF
Sbjct: 331 YSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTL 390
Query: 333 ---------EAMTCKNVASWNTMITGYA--------------------QSGEITHARNLF 363
+A C + I +A + G++ +A +F
Sbjct: 391 ASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF 450
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
+ + D ++W ++I+G +G + +LR++ M++ + F +++ + + +LE
Sbjct: 451 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 510
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G+QLH ++K+ + FVG +L+ MY KCG++E+AY F+++ +++ WN M+ G A
Sbjct: 511 QGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLA 570
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+HG ++A+ LF+SMK+ GI+PD ++ +GILSACSH GL + EY +SM DYG+ P
Sbjct: 571 QHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEI 630
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+HY+C+VD LGRAG + EA +++ MPF+ A+ ALLGACR+ G E ++ A +F
Sbjct: 631 EHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFA 690
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDT 663
+EP ++ YVLLSN+YAA+ RW DV+ R M+ + VKK G+SW++V+N +H F V D
Sbjct: 691 LEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDR 750
Query: 664 LHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI 723
HP+ D IY +EE+ +++DG+V T+ VL DV +EEKE L YHSEKLA+AYG++S
Sbjct: 751 SHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLIST 810
Query: 724 PAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PA IRV+KNLRVC DCHNAIK+ISK+ R I+LRD NRFHHF G CSCGDYW
Sbjct: 811 PASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 163/373 (43%), Gaps = 41/373 (10%)
Query: 58 DW----DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNG--Q 107
DW D+ WN+ + +++ G A +F+ R S +++G L G
Sbjct: 242 DWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDD 301
Query: 108 LDPARQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
L+ +QV + D+ N +++ Y + AR +F M D++SWN+M+S
Sbjct: 302 LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS 361
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
AQ+ + + +F +L + + + A + +AC + + +++
Sbjct: 362 CAQSSLEEESVNLFIDLLHEG-LKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIK 420
Query: 224 GGF--------------VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
GF +K + +A +F+ + D+V+W +MI+G N +A R+
Sbjct: 421 AGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 480
Query: 270 F----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGYVQ 321
+ + + D +T+ ++ +++ R + + + + VS +++ Y +
Sbjct: 481 YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 540
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAI 377
++ A LF+ M +N+A WN M+ G AQ G A NLF M H D +S+ I
Sbjct: 541 CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 600
Query: 378 IAGYAQSGYSEDS 390
++ + +G + ++
Sbjct: 601 LSACSHAGLTSEA 613
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 25/310 (8%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + +++ G +A VFN + V++ +MISG + NG D A +
Sbjct: 420 KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALR 479
Query: 114 VFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYA 165
++ +M Q D ++ +I +L R L + K D VS +++ YA
Sbjct: 480 IYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYA 539
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNS 221
+ G + A R+F +M +N WN +L Q+G EEA LF+S + + VS+
Sbjct: 540 KCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIG 599
Query: 222 LMGGFVKQKRLGDAKWIFDRMP----VRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVK 276
++ +A MP + E+ ++ ++ + + EA ++ E P K
Sbjct: 600 ILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 659
Query: 277 D------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ G V+ GK AR+ A+ ++ ++ + Y R D +
Sbjct: 660 ASASINRALLGACRIQGDVETGKRVAARLF--ALEPFDSAAYVLLSNIYAAANRWDDVTD 717
Query: 331 LFEAMTCKNV 340
+ M KNV
Sbjct: 718 ARKMMKRKNV 727
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 26/247 (10%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L T + +L LGK H ++V G F+ N LL MY KCGS+ A F+ ++D
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 472 VISWNTMIAGYA-----RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV--- 523
+++WN ++ YA G ++ L LF ++ +T+ +L C ++G +
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E Y + ++ V + +V++ + GR+ +A+ L M E D W +L
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGA----LVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLK 257
Query: 584 ACRLYGKTELAEKAAEVIFE-----MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
Y + L ++A ++ E + P+ + ++L+ W + L +
Sbjct: 258 G---YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCL-----WAGTDDLELGKQVH 309
Query: 639 GVKKVTG 645
G+ +G
Sbjct: 310 GIAVKSG 316
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/742 (36%), Positives = 405/742 (54%), Gaps = 63/742 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA------------- 142
N +++ Y+ + L A ++FD+MPQ + +S+ + GY R+ A
Sbjct: 74 NILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHE 133
Query: 143 ------RNLFEMMPKRDV--VSWN------------------TMLSGYAQNGYADAARRI 176
L +++ D+ + W ++ Y+ G D AR +
Sbjct: 134 VNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHV 193
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES------KANWEVVS--WNSLMG--GF 226
FD + K+ +SW G++A Y +N EE+ LF K N +S S +G F
Sbjct: 194 FDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAF 253
Query: 227 -VKQKRLGDA-KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
V + G A K +D D ++ YA++ + +AQRLFEE P D+ W+ M
Sbjct: 254 NVGKSVHGCALKGCYDH----DLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLM 309
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ----TKRMDMARELFEAMT---- 336
++ Y Q+ + EA +F M + + V N A +Q + +D+ +++ +
Sbjct: 310 IARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGL 369
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
NV N ++ YA+ GEI ++ LF+ +P + ++W II GY Q G E ++ LF
Sbjct: 370 NSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTH 429
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M + + ++SVL A+LA+LE G Q+H +K + V N+L+ MY KCG
Sbjct: 430 MLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGR 489
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+ +A F+++ +D +SWN MI GY+ HG +AL LF+ M+ KP+ +T VG+LSA
Sbjct: 490 INDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSA 549
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS+ GL+ KG +F SM++DY + P +HYTCMV LLGR GR DEA L+ + ++P
Sbjct: 550 CSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVM 609
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W ALLGAC ++ K +L A+ + EMEP + +VLLSN+YA +GRW +V+ VR M+
Sbjct: 610 VWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQ 669
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
+ V+K G SW+E Q VH FSVGDT HP+ I A LE L K + G+V VL
Sbjct: 670 KKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLL 729
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
DV ++EKE L HSE+LA+AYG++ P IR++KNLR+C DCH +K ISK+V R I
Sbjct: 730 DVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREI 789
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
++RD NRFHHF G CSCGDYW
Sbjct: 790 VIRDINRFHHFRHGVCSCGDYW 811
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 175/356 (49%), Gaps = 16/356 (4%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
I R D + N ++ Y Q+N L +A +LF+E P + ++ + GY ++ + +A
Sbjct: 61 ILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQA 120
Query: 298 RM----IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC-------KNVASWNTM 346
IF E N + ++ V MD+A + C + +
Sbjct: 121 LHFILRIFKEGHEVNPFVFTTLLKLLVS---MDLAHLCWTLHACVYKLGHHADAFVGTAL 177
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I Y+ G + AR++FD + D +SW ++A YA++ + E+SL+LF +M+ G + N
Sbjct: 178 IDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNN 237
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+ L +C L + +GK +HG +K ++ FVG ALL +Y K G + +A FEE
Sbjct: 238 FTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEE 297
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ D+I W+ MIA YA+ K+AL LF M+ + P++ T +L AC+ + ++ G
Sbjct: 298 MPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLG 357
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ +S +G+ N ++D+ + G ++ + L + +P D TW ++
Sbjct: 358 KQ-IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTII 411
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 150/310 (48%), Gaps = 29/310 (9%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
T ++ + N ++ Y QS + A LFD MPQ + IS+ + GY++ +L +
Sbjct: 66 TSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFIL 125
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+ + G +N FT++L ++ L LH + K+G A FVG AL+ Y G
Sbjct: 126 RIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRG 185
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+V+ A H F++I KD++SW M+A YA + F +++L LF M+ +G KP++ T+ G L
Sbjct: 186 NVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALK 245
Query: 516 AC----------SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+C S G KG Y + G+ +++L ++G + +AQ L
Sbjct: 246 SCLGLEAFNVGKSVHGCALKGC---YDHDLFVGI--------ALLELYAKSGEIIDAQRL 294
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ MP + D W ++ Y +++ +++A ++ M + V+ +N AS
Sbjct: 295 FEEMP-KTDLIPWSLMIAR---YAQSDRSKEALDLFLRMRQTS----VVPNNFTFASVLQ 346
Query: 626 GDVSKVRLKM 635
S V L +
Sbjct: 347 ACASSVSLDL 356
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 61/371 (16%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG-- 132
G D A HVF+ + + VS+ M++ Y N + + Q+F+QM N ISG
Sbjct: 185 GNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGAL 244
Query: 133 -------------------------------------YVRNKSLSAARNLFEMMPKRDVV 155
Y ++ + A+ LFE MPK D++
Sbjct: 245 KSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLI 304
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN---------GRIEEACM 206
W+ M++ YAQ+ + A +F RM + + + N A+ +Q G+ +C+
Sbjct: 305 PWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCV 364
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
L + N V N++M + K + ++ +F+ +P R++V+WNT+I GY Q A
Sbjct: 365 L-KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERA 423
Query: 267 QRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAG 318
LF D+ T+++++ ++ I M K+TV N++I
Sbjct: 424 MNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDM 483
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISW 374
Y + R++ AR F+ M ++ SWN MI GY+ G A NLFD M DC +++
Sbjct: 484 YAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTF 543
Query: 375 AAIIAGYAQSG 385
+++ + +G
Sbjct: 544 VGVLSACSNAG 554
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 22/268 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL----NGQLDPARQVF 115
D+ W++ I + ++ AL +F M + S V N + L + LD +Q+
Sbjct: 302 DLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIH 361
Query: 116 DQMPQRDLVSWNVMISG-----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ + L S NV +S Y + + + LFE +P R+ V+WNT++ GY Q G
Sbjct: 362 SCVLKFGLNS-NVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDG 420
Query: 171 DAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSL 222
+ A +F MLE + E++++ +L A +E + ++ N + V NSL
Sbjct: 421 ERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSL 480
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV---- 278
+ + K R+ DA+ FD+M RDEVSWN MI GY+ + EA LF+ D
Sbjct: 481 IDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNK 540
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPE 306
T+ ++S G + + + F++M +
Sbjct: 541 LTFVGVLSACSNAGLLYKGQAHFESMSK 568
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNL 145
+M + +V N++I Y G+++ AR FD+M +RD VSWN MI GY + A NL
Sbjct: 468 TMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNL 527
Query: 146 FEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYV 196
F+MM D +++ +LS + G + F+ M + +I + ++
Sbjct: 528 FDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLG 587
Query: 197 QNGRIEEACMLF-ESKANWEVVSWNSLMGGFVKQKRL 232
+ GR +EA L E V+ W +L+G V K++
Sbjct: 588 RLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKV 624
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GK LH ++K G F N LL Y + S+++A F+E+ + IS+ T+ GY+R
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 485 -HGF 487
H F
Sbjct: 114 DHQF 117
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/573 (42%), Positives = 348/573 (60%), Gaps = 14/573 (2%)
Query: 220 NSLMGGFVK---QKRLGDAKW---IFDRMPVRDEVSWNTMITGYAQ----NNYLAEAQRL 269
N MG +K + GD + +FD++P D +NT+ GY + N + R+
Sbjct: 52 NDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRM 111
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRM 325
++ + FT+ ++ + ++E + I + + + S N +I YV + +
Sbjct: 112 LHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSL 171
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ AR +F+ M ++V SW ++ITGY+Q G + AR +F+ MP+ + +SW A+IA Y QS
Sbjct: 172 EQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSN 231
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
++ LF M+ L++ S+LS C L +LE GK +HG + K G E +
Sbjct: 232 RLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLAT 291
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
++ MYCKCG +E+A F E+ K + SWN MI G A HG G+ A+ LF+ M+ + P
Sbjct: 292 TVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAP 351
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D IT V +LSAC+H+GLVE+G YF M G+ P +H+ CMVDLLGRAG L+EA+ L
Sbjct: 352 DGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKL 411
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ MP PDA GAL+GACR++G TEL E+ + + E+EP N+G YVLL+NLYA++GRW
Sbjct: 412 INEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRW 471
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
DV+KVR M DRGVKK G+S +E ++ V F G HP+ IYA L+E+ ++
Sbjct: 472 EDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSI 531
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+V T VLHD+ EEEKE+ L YHSEKLA+A+G+L G +R+ KNLR+C DCH A
Sbjct: 532 GYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQAS 591
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISK+ R II+RD NRFHHF G CSC DYW
Sbjct: 592 KLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 177/381 (46%), Gaps = 40/381 (10%)
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNG 190
++ L+ A +F+ +P D +NT+ GY + A ++ RML K N+ ++
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 191 LLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
L+ A + IEE + + + S N+L+ +V + L A+ +FD MP RD
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
VSW ++ITGY+Q ++ +A+ +FE P ++ +W AM++ YVQ+ ++ EA +FD M
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245
Query: 307 KNTV-------------------SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
+N V I GY++ +++ +L T+I
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKL-----------ATTVI 294
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
Y + G + A +F+ +PQ SW +I G A G E ++ LF EM+R +
Sbjct: 295 DMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGI 354
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
F +VLS CA+ +E GK + +V G + G ++ + + G +EEA E
Sbjct: 355 TFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINE 414
Query: 467 I-VDKDVISWNTMIAGYARHG 486
+ V+ D ++ HG
Sbjct: 415 MPVNPDAGVLGALVGACRIHG 435
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 157/351 (44%), Gaps = 56/351 (15%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYL---------------LNGQLDPARQVFDQ 117
++G + AL VF+ +P + YN + GYL L+ + P + +
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 118 MPQR------------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
+ + D S N +I YV +SL AR +F+ MP+RD
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
VVSW ++++GY+Q G+ D AR +F+ M E+N +SWN ++AAYVQ+ R+ EA LF+
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245
Query: 214 WEVV----SWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAE 265
VV S++ L KWI + D T+I Y + L +
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 305
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
A +F E P K + +W M+ G +GK + A +F M + + +++ +++
Sbjct: 306 ASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAH 365
Query: 322 TKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ ++ + F+ MT + + M+ ++G + AR L + MP
Sbjct: 366 SGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 416
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 52/235 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ W IT + + G D A VF MP R+SVS+NAMI+ Y+ + +L A +FD+M
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244
Query: 120 QRDLV----------------------SW-----------------NVMISGYVRNKSLS 140
++V W +I Y + L
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD----RMLEKNEISWNGLLAAYV 196
A +F +P++ + SWN M+ G A +G +AA +F M+ + I++ +L+A
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGF-------VKQKRLGDAKWIFDRMPV 244
+G +EE F+ EV+ M F + L +A+ + + MPV
Sbjct: 365 HSGLVEEGKHYFQYMT--EVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPV 417
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 279/836 (33%), Positives = 412/836 (49%), Gaps = 155/836 (18%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP------- 150
++ Y G L AR+VFD+MP+RD+V+WN MI+G +++ A + F M
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 151 ----------------------------KRDVVSW--NTMLSGYAQNGYADAARRIFDRM 180
+RD S N ++ Y++ G D ARR+FD+M
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM 289
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLF-------------------------------- 208
++++++SW ++A Y NG E LF
Sbjct: 290 VDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGK 349
Query: 209 -------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ + + +++ LM + K AK +F + RD V+W+ +I Q
Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTG 409
Query: 262 YLAEAQRLFEEA----------------------------------PVK-----DVFTWT 282
Y EA LF+E VK D+ T T
Sbjct: 410 YPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGT 469
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMAREL------- 331
A+VS Y + G A F+ M ++ V+WN++I GY Q +DM +L
Sbjct: 470 ALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINP 529
Query: 332 -----------------FEAMTC-----------KNVASWNTMITGYAQSGEITHARNLF 363
+ TC + N +I YA+ G + A LF
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 364 DRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
++ D ++W IIA Y Q+G++++++ F +M+ N F SVL A LA+
Sbjct: 590 NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 649
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G H ++++GF + VGN+L+ MY KCG + + F E+ KD +SWN M++GY
Sbjct: 650 REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGY 709
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A HG G A+ LF M+ ++ D ++ V +LSAC H GLVE+G + F+SM+ Y + P+
Sbjct: 710 AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPD 769
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVDLLGRAG DE +K MP EPDA WGALLG+CR++ +L E A + +
Sbjct: 770 LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 829
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
++EP N +V+LS++YA SGRW D K R KM D G+KK G SW+E++NKVH F VGD
Sbjct: 830 KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD 889
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP+ + ++ L K+++ G+V VL +V EE+KE L HSE+LA+ + +L+
Sbjct: 890 KSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLN 949
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P G I+++KNLRVC DCH K ISKI R II+RD RFHHF G CSC DYW
Sbjct: 950 TPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 168/648 (25%), Positives = 284/648 (43%), Gaps = 74/648 (11%)
Query: 14 CILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMR 73
CI HQ +S + + A+ P S T +L+ P + N + H
Sbjct: 2 CIKHQLRRSFTSIATXASEFPSLSSSTYTNYLH-------YPRLLSSCKHLNPLLQIH-- 52
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
A + + S+++ +I+ Y L + D AR VFD P + WN MI Y
Sbjct: 53 ------AQIIVSGFKHHHSITH--LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAY 104
Query: 134 VRNKSLSAARNLFEMMPK---------------------------------------RDV 154
R+K + A ++ M + RDV
Sbjct: 105 TRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDV 164
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
++ Y++ G AR +FD+M +++ ++WN ++A Q+ EA F S
Sbjct: 165 FIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLV 224
Query: 215 EV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW--NTMITGYAQNNYLAEAQR 268
V VS +L G K + + I + RD S N +I Y++ + A+R
Sbjct: 225 GVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARR 284
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKR 324
+F++ +D +W M++GY NG E +FD M N VS + +T
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETID 344
Query: 325 MDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
++ +E+ + ++ ++ YA+ GE A+ LF + D ++W+AIIA
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Q+GY E++L LF EM+ + NR S+L CA+L+ L+LGK +H VK ++
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
G AL+ MY KCG A F + +D+++WN++I GYA+ G +A+ +F ++
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
I PD TMVG++ AC+ +++GT + + G + ++D+ + G L
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGT-CIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
A+ L F D TW ++ A Y + A++A +M EN
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAA---YMQNGHAKEAISSFHQMRLEN 628
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 202/480 (42%), Gaps = 78/480 (16%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ---------- 107
D D+ ++ + + G +AL FN M R V++N++I+GY G
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 108 ---------------LDPARQVFDQMPQ--------------RDLVSWNVMISGYVRNKS 138
+ PA + + + Q D N +I Y + S
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGS 581
Query: 139 LSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLL- 192
L +A LF +D V+WN +++ Y QNG+A A F +M N +++ +L
Sbjct: 582 LPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLP 641
Query: 193 -AAYV---QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
AAY+ + G AC++ + +V NSL+ + K +L ++ +F+ M +D V
Sbjct: 642 AAAYLAAFREGMAFHACIIQMGFLSNTLVG-NSLIDMYAKCGQLXYSEKLFNEMDHKDTV 700
Query: 249 SWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
SWN M++GYA + + A LF +E+ V+ D ++ +++S G V+E R IF +M
Sbjct: 701 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSM 760
Query: 305 PEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGY-----AQS 353
+K + + M+ + D + M + + W ++ +
Sbjct: 761 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 820
Query: 354 GEIT--HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
GE+ H L R P H + + + YAQSG D+ + +M G L ++P S
Sbjct: 821 GEVALDHLVKLEPRNPAH----FVVLSSIYAQSGRWADAGKARSKMNDLG--LKKTPGCS 874
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+ + + +G + H QL E+ + N LL K G V + + + ++D
Sbjct: 875 WVELKNKVHAFRVGDKSHPQL-----ESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED 929
>gi|297826975|ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327209|gb|EFH57629.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/551 (41%), Positives = 357/551 (64%), Gaps = 4/551 (0%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQ 197
L+ AR LF+ +P+RDVV+W +++GY + G AR +FDR+ KN ++W +++ Y++
Sbjct: 62 LAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVTWTAMVSGYLR 121
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ ++ A LF+ +VSWN+++ G+ + R+ A +FD MP R+ VSWNTMI
Sbjct: 122 SKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKAL 181
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
Q + EA LFE P+KDV +WTAMV G +NGKVDEAR +FD MPE+N +SWNAMI
Sbjct: 182 VQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMIT 241
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
GY R+D A +LF+ M ++ ASWNTMITG+ ++ EI A LFDRMPQ + ISW A+
Sbjct: 242 GYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKNVISWTAM 301
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYG-ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
I GY ++ +E++L++F +M R G + N + S+LS C++LA L G+Q+H + K
Sbjct: 302 ITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGYARHGFGKDALML 494
+ V +AL+ MY K G + A F+ + +D+ISWN+MIA YA HG GK+A+ +
Sbjct: 362 HQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
++ M+ G KP ++T + +L ACSH GLVEKG E+F + RD + +HYTC+VDL G
Sbjct: 422 YDQMRKHGFKPSEVTYLNLLFACSHAGLVEKGMEFFKELVRDESLPLREEHYTCLVDLCG 481
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAGRL + N + + +GA+L AC ++ + +A++ + + E ++AG YV+
Sbjct: 482 RAGRLKDVLNFINCDDARLSRSFYGAILSACNVHSEVSIAKEVVKKVLETGSDDAGTYVM 541
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
+SN+YAASG+ +++R+KM+++G+KK G SW+++ N+ H F VGD HP+ + + +
Sbjct: 542 MSNIYAASGKREKAAEMRMKMKEKGLKKQPGCSWVKIGNQTHLFVVGDKSHPQFEALDSI 601
Query: 675 LEELEFKLKQD 685
+ +L K++++
Sbjct: 602 VSDLRNKMRKN 612
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 249/439 (56%), Gaps = 50/439 (11%)
Query: 39 KTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAM 98
+ L R + S S P +W I + G A +F+ +P R V++ +
Sbjct: 31 RNLVRSIYSSSSKPRVPRPEW-------LIGKLCKVGKLAEARKLFDGLPERDVVTWTDV 83
Query: 99 ISGYLLNGQLDPARQVFDQMPQR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
I+GY+ G + AR++FD++ R ++V+W M+SGY+R+K LS A LF+ MP+R++VSW
Sbjct: 84 ITGYIKLGNMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSW 143
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
NTM+ GYAQ+G D A +FD M E+N +SWN ++ A VQ GRI+EA LFE +V+
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVI 203
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
SW +++ G K ++ +A+ +FD MP R+ +SWN MITGY NN + EA +LF+ P +D
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERD 263
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
+W M++G+++N +++ A +FD MP+KN +SW AMI GYV+ K + A ++F M
Sbjct: 264 FASWNTMITGFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKMLR 323
Query: 336 ----------------TCKNVASW----------------------NTMITGYAQSGEIT 357
C ++A + +I Y++SGE+
Sbjct: 324 DGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQENEVVTSALINMYSKSGELI 383
Query: 358 HARNLFDR--MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
AR +FD + Q D ISW ++IA YA G+ ++++ ++ +M+++G + + + ++L
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHGFKPSEVTYLNLLFA 443
Query: 416 CANLASLELGKQLHGQLVK 434
C++ +E G + +LV+
Sbjct: 444 CSHAGLVEKGMEFFKELVR 462
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 124/287 (43%), Gaps = 35/287 (12%)
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ CK G + EA F+ + ++DV++W +I GY + G ++A LF+ + + + +
Sbjct: 52 LIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDS---RKN 108
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T ++S + + F M N + M+D ++GR+D+A L
Sbjct: 109 VVTWTAMVSGYLRSKQLSVAETLFQEMPE-----RNIVSWNTMIDGYAQSGRIDKALELF 163
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP-ENAGMYVLLSNLYAASGRW 625
MP E + +W ++ A G+ + A +FE P ++ + + + A +G+
Sbjct: 164 DEMP-ERNTVSWNTMIKALVQRGRIDEAMN----LFERMPIKDVISWTAMVDGLAKNGKV 218
Query: 626 GDVSKVRLKMRDRGV----KKVTGYSWLEVQNKVHTFSVGDTLHPEKD------RIYAYL 675
+ ++ M +R + +TGY++ N++ + PE+D I ++
Sbjct: 219 DEARRLFDCMPERNIISWNAMITGYTY---NNRIDEADQLFQVMPERDFASWNTMITGFI 275
Query: 676 EELEF--------KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
E ++ Q + T ++ V +E E L+ S+ L
Sbjct: 276 RNREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKML 322
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/645 (40%), Positives = 382/645 (59%), Gaps = 31/645 (4%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
R LF + + ++ WNTM+ G N D A + M + + N +V
Sbjct: 65 TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLP-NNFTFPFVLKACA 123
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ K + VV GGF D D +++ YA+
Sbjct: 124 RLLDLQLGVKIHTLVVK-----GGF-------DC----------DVFVKTSLVCLYAKCG 161
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIA 317
YL +A ++F++ P K+V +WTA++SGY+ GK EA +F + E N + + +++
Sbjct: 162 YLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLS 221
Query: 318 GYVQTKRMD----MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
Q ++ + + + E +NV +++ YA+ G + AR++FD MP+ D +S
Sbjct: 222 ACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVS 281
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I GYA +G ++++ LF++M+R + + VLS CA L +LELG+ + G +
Sbjct: 282 WGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVD 341
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+ F +G AL+ +Y KCGS+ A+ F+ + +KD + WN +I+G A +G+ K +
Sbjct: 342 RNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFG 401
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LF ++ +GIKPD T +G+L C+H GLV++G YF SM R + + P+ +HY CMVDLL
Sbjct: 402 LFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLL 461
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GRAG LDEA L++NMP E +A WGALLGACR++ T+LAE A + + E+EP N+G YV
Sbjct: 462 GRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYV 521
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LLSN+Y+A+ +W + +KVRL M ++ ++K G SW+EV VH F VGD HP ++IYA
Sbjct: 522 LLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYA 581
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L+EL K+K G+V +T VL D+ EEEKEH L HSEKLA+A+G++S IRV+K
Sbjct: 582 KLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVK 641
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLRVC DCH AIK IS I GR I +RDNNRFH F GSCSC DYW
Sbjct: 642 NLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 142/255 (55%), Gaps = 5/255 (1%)
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ + R LF ++ Q + W +I G + +D++ + M+ G N F VL
Sbjct: 61 DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLK 120
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA L L+LG ++H +VK GF+ FV +L+ +Y KCG +E+A+ F++I DK+V+S
Sbjct: 121 ACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVS 180
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W +I+GY G ++A+ +F + + + PD T+V +LSAC+ G + G E+ +
Sbjct: 181 WTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG-EWIHKCI 239
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ G++ N T +VD+ + G +++A+++ MP E D +WGA++ L G L
Sbjct: 240 MEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP-EKDIVSWGAMIQGYALNG---LP 295
Query: 595 EKAAEVIFEMEPENA 609
++A ++ +M+ EN
Sbjct: 296 KEAIDLFLQMQRENV 310
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 159/371 (42%), Gaps = 32/371 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
+I WN I + N C D A+ + M P + + LL+ QL
Sbjct: 76 NIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIH 135
Query: 114 --VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
V D+ ++ Y + L A +F+ +P ++VVSW ++SGY G
Sbjct: 136 TLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFR 195
Query: 172 AARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVSWNSL 222
A +F R+LE N + +L+A Q G + C++ E V SL
Sbjct: 196 EAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM-EMGMVRNVFVGTSL 254
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDV 278
+ + K + A+ +FD MP +D VSW MI GYA N EA LF E D
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC 314
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMIAGYVQTKRMDMARELFE 333
+T ++S + G ++ + + ++N +N A+I Y + M A E+F+
Sbjct: 315 YTVVGVLSACARLGALELGEWV-SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFK 373
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSED 389
M K+ WN +I+G A +G + + LF ++ + D ++ ++ G +G ++
Sbjct: 374 GMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDE 433
Query: 390 SLRLFIEMKRY 400
R F M R+
Sbjct: 434 GRRYFNSMYRF 444
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 166/382 (43%), Gaps = 45/382 (11%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + + G + A VF+ +P ++ VS+ A+ISGY+ G+ A
Sbjct: 140 KGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAID 199
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNL-------------FEMMPKRDVVSWNTM 160
+F R L+ N+ + + LSA L EM R+V ++
Sbjct: 200 MF-----RRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSL 254
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV-VSW 219
+ YA+ G + AR +FD M EK+ +SW ++ Y NG +EA LF V
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC 314
Query: 220 NSLMGGFVKQKRLGD---AKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFE 271
+++G RLG +W+ + R+E +N +I YA+ ++ A +F+
Sbjct: 315 YTVVGVLSACARLGALELGEWV-SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFK 373
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRM 325
KD W A++SG NG V + +F + P+ NT + ++ G +
Sbjct: 374 GMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNT--FIGLLCGCTHAGLV 431
Query: 326 DMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIA 379
D R F +M ++ + M+ ++G + A L MP + + I W A++
Sbjct: 432 DEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLG 491
Query: 380 G---YAQSGYSEDSLRLFIEMK 398
+ + +E +L+ IE++
Sbjct: 492 ACRIHRDTQLAELALKQLIELE 513
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 286/815 (35%), Positives = 423/815 (51%), Gaps = 99/815 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVF 115
D W IT + +G A+ +F+ M R +V++ A++ G L R +
Sbjct: 92 DEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + L V N+++ Y +++A LFE M +RD+VSWN ++ AQ+G D
Sbjct: 152 AWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLD 210
Query: 172 AARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGF 226
A +F RM LE + L+ +I +A ++ ES +V +L +
Sbjct: 211 MALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAY 270
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---------------- 270
+ L AK +FDR RD VSWN M+ YAQ+ +++EA LF
Sbjct: 271 ARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLV 330
Query: 271 --------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
E+ +D+ A++ Y + G +EAR +F+ +P N V
Sbjct: 331 NASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAV 389
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS---------------------------- 342
SWN MIAG Q +M A ELF+ M + +A
Sbjct: 390 SWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKL 449
Query: 343 ---------------WNTMITGYAQSGEITHARNLFDRMP---QHDCISWAAIIAGYAQS 384
++ YA G I A F R +HD +SW AII+ +Q
Sbjct: 450 HSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQH 509
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G+ + +L F M +G N+ +VL CA A+L G +H L G E+ FV
Sbjct: 510 GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVA 569
Query: 445 NALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
AL MY +CGS+E A FE++ V++DV+ +N MIA Y+++G +AL LF M+ G
Sbjct: 570 TALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGS 629
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+PD+ + V +LSACSH GL ++G E F SM + YG+ P+ HY C VD+LGRAG L +A+
Sbjct: 630 RPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAE 689
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
L++ M +P W LLGACR Y + A ++ E++P + YV+LSN+ A +G
Sbjct: 690 ELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAG 749
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W + ++VR +M RG++K G SW+E++++VH F GD HP + IY LE L +++
Sbjct: 750 KWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIR 809
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+V T+LVL V E EKE +L HSE+LA+A G++S + +RVMKNLRVCEDCHN
Sbjct: 810 EIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMS-SSTDTVRVMKNLRVCEDCHN 868
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A K ISKIV + I++RD +RFHHF GSCSCGDYW
Sbjct: 869 ATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 236/552 (42%), Gaps = 124/552 (22%)
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--------------------------- 208
+F R+ ++E SW ++ AY ++G+ + A +F
Sbjct: 84 VFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGD 143
Query: 209 ------------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
ES + V N L+ + + A +F+RM RD VSWN I
Sbjct: 144 LSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAA 202
Query: 257 YAQNNYLAEAQRLFEEAPVKDV------------------------------------FT 280
AQ+ L A LF+ ++ V
Sbjct: 203 NAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVV 262
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----- 335
TA+ S Y + G +D+A+ +FD E++ VSWNAM+ Y Q M A LF M
Sbjct: 263 STALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGI 322
Query: 336 ------------------------TC-------KNVASWNTMITGYAQSGEITHARNLFD 364
C +++ N ++ Y + G AR+LF+
Sbjct: 323 PPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFE 382
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN----LA 420
+P + +SW +IAG +Q G + +L LF M+ G R+ + ++L A+
Sbjct: 383 GIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEAR 441
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE--IVDK-DVISWNT 477
++ G++LH ++V G+ + +G A++ MY CG+++EA +F+ + D+ DV+SWN
Sbjct: 442 AMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNA 501
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I+ ++HG GK AL F M G+ P+ IT V +L AC+ + +G + R
Sbjct: 502 IISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGV-IVHDHLRHS 560
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ N T + + GR G L+ A+ + + + E D + A++ A Y + LA +A
Sbjct: 561 GMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA---YSQNGLAGEA 617
Query: 598 AEVIFEMEPENA 609
++ + M+ E +
Sbjct: 618 LKLFWRMQQEGS 629
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 195/450 (43%), Gaps = 85/450 (18%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPV 275
N L+ ++K + LGD + +F R+ VRDE SW T+IT Y ++ A R+ +E
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVR 125
Query: 276 KDVFTWTAMVSGYVQNGKVDEAR-----------------------------------MI 300
D T+ A++ + G + + R ++
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLL 185
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV--ASWNTMIT---------- 348
F+ M E++ VSWNA IA Q+ +DMA ELF+ M + V A +IT
Sbjct: 186 FERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQA 244
Query: 349 ------------------------GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
YA+ G + A+ +FDR + D +SW A++ YAQ
Sbjct: 245 RAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQH 304
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G+ ++ LF M G ++ + + C +SL G+ +H ++ G + +G
Sbjct: 305 GHMSEAALLFARMLHEGIPPSKVTLVNASTGC---SSLRFGRMIHACALEKGLDRDIVLG 361
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NALL MY +CGS EEA H FE I + +SWNTMIAG ++ G K AL LF+ M+ G+
Sbjct: 362 NALLDMYTRCGSPEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMA 420
Query: 505 PDDITMVGILSACSHTGLVEKGT---EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
P T + +L A + + +S G T +V + G +DE
Sbjct: 421 PVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDE 480
Query: 562 AQNLMKNMPFEP--DAATWGALLGACRLYG 589
A + E D +W A++ + +G
Sbjct: 481 AAASFQRGAMEDRHDVVSWNAIISSLSQHG 510
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 39/375 (10%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
N ++ Y + L + + +F V+D +WT +++ Y ++G+ A +F M ++
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVR 125
Query: 308 -NTVSWNAMIAGYVQTKRMDMARELF-----EAMTCKNVASWNTMITGYAQSGEITHARN 361
+ V++ A++ + + R + + K+V + N ++ Y G + A
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLA-NLLLHIYGSCGCVASAML 184
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+RM + D +SW A IA AQSG + +L LF M+ G R R LS CA +
Sbjct: 185 LFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ 243
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+ +H + + G E V AL Y + G +++A F+ ++DV+SWN M+
Sbjct: 244 ---ARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGA 300
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS--------HTGLVEKGTEYFYSM 533
YA+HG +A +LF M GI P +T+V + CS H +EKG +
Sbjct: 301 YAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKG------L 354
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+RD V+ N+ ++D+ R G +EA++L + +P +A +W ++ G+
Sbjct: 355 DRDI-VLGNA-----LLDMYTRCGSPEEARHLFEGIP--GNAVSWNTMIAGSSQKGQM-- 404
Query: 594 AEKAAEVIFEMEPEN 608
++A E+ M+ E
Sbjct: 405 -KRALELFQRMQLEG 418
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L G+++H ++V +G E +GN LL +Y KC S+ + F + +D SW T+I
Sbjct: 45 LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y HG K A+ +F M+ G++ D +T + +L AC+ G + +G ++ + G+
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS-IHAWIVESGLEG 161
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
S ++ + G G + A L + M E D +W A + A G ++A
Sbjct: 162 KSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAANAQSGDLDMA 212
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/550 (43%), Positives = 339/550 (61%), Gaps = 48/550 (8%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
D+F +A++ Y + G++ +AR +FD +P +N VSW +MI GYVQ ++ D A LF+
Sbjct: 1176 DLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFL 1235
Query: 336 ------------------------TCKNVAS----------------------WNTMITG 349
C V+ NT++
Sbjct: 1236 EEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDA 1295
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY-GERLNRSP 408
YA+ G+ ++ +FD M + D ISW ++IA YAQSG S ++L +F M R+ G R N
Sbjct: 1296 YAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVT 1355
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
++VL CA+ +L GK +H Q++K+ E VG +++ MYCKCG VE A F+ +
Sbjct: 1356 LSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK 1415
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+K+V SW M+AGY HG K+AL +F M G+KP+ IT V +L+ACSH GLVE+G
Sbjct: 1416 EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWH 1475
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+F +M Y + P +HY CMVDL GRAG L+EA NL+K M +PD WG+LLGACR++
Sbjct: 1476 WFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIH 1535
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
+L E AA+ +FE++P+N G YVLLSNLYA +GRW DV ++R+ M++R + K G+S
Sbjct: 1536 KNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSL 1595
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
+E++ +VH F VGD HP + IY YLE+L +L++ G+V + VLHDV EEEKE +LR
Sbjct: 1596 VELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILR 1655
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
HSEKLAVA+G+++ G I ++KNLRVC DCH IK ISK+V R ++RD+ RFHHF
Sbjct: 1656 VHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFK 1715
Query: 769 GGSCSCGDYW 778
G CSCGDYW
Sbjct: 1716 DGVCSCGDYW 1725
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 177/340 (52%), Gaps = 8/340 (2%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVS 286
R+ A +F ++ +WN +I N +A L++ + D FT+ ++
Sbjct: 74 RIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 287 GYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
+D +++ ++ + + N +I Y + A ++FE M +NV S
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS 193
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
W T+I+G G++ AR +FD +P + +SW A+I GY ++ E++L LF M+
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
N S++ C + L LG+ +H +K E G ++G AL+ MY KCGS+++A
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
FE + K + +WN+MI HG G++AL LF M+ V +KPD IT +G+L AC H
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN 373
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
V++G YF M + YG+ P +HY CM +L R+ LDEA
Sbjct: 374 VKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 138/297 (46%), Gaps = 42/297 (14%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I Y+ G I +A LF ++ +W II +G SE +L L+ M G +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK------------ 453
+ F V+ C N S++LGK +HG L+K GF FV N L+ Y K
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 454 -------------------CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
CG ++EA F+EI K+V+SW MI GY R+ ++AL L
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGT---EYFYSMNRDYGVIPNSKHYTCMVD 551
F+ M+ I P++ TMV ++ AC+ G++ G +Y + GV T ++D
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG----TALID 300
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
+ + G + +A + + MP TW +++ + ++G L ++A + EME N
Sbjct: 301 MYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHG---LGQEALNLFSEMERVN 353
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 172/375 (45%), Gaps = 35/375 (9%)
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
DQ+ R L+ Y + ++ A LF + +WN ++ NG ++ A
Sbjct: 58 DQLLTRKLIHL------YSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQAL- 110
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF----VKQKR 231
ML KN + G+ A + +AC F S +VV + + GF Q
Sbjct: 111 ----MLYKNMVC-QGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNN 165
Query: 232 LGD----------AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
L D A +F++M VR+ VSW T+I+G L EA+R+F+E P K+V +W
Sbjct: 166 LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSW 225
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTV----SWNAMIAGYVQTKRMDMAREL--FEAM 335
TAM++GY++N + +EA +F M +N + ++I + + + R + +
Sbjct: 226 TAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIK 285
Query: 336 TCKNVASW--NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
C + + +I Y++ G I A +F+ MP+ +W ++I G +++L L
Sbjct: 286 NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNL 345
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYC 452
F EM+R + + F VL C ++ +++ G ++ + G + +Y
Sbjct: 346 FSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYA 405
Query: 453 KCGSVEEAYHAFEEI 467
+ +++EA+ + +E+
Sbjct: 406 RSNNLDEAFKSTKEV 420
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 56/321 (17%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR------------------------------SSV 93
WN+ I + NG + AL ++ +M + S +
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152
Query: 94 SY---------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
Y N +I Y G A +VF++M R++VSW +ISG + L AR
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNG- 199
+F+ +P ++VVSW M++GY +N + A +F RM + NE + L+ A + G
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 200 -RIEEACMLFESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ + K E+ + +L+ + K + DA +F+ MP + +WN+MIT
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332
Query: 257 YAQNNYLAEAQRLFEE---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS- 311
+ EA LF E VK D T+ ++ V V E F M + ++
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392
Query: 312 ----WNAMIAGYVQTKRMDMA 328
+ M Y ++ +D A
Sbjct: 393 IPEHYECMTELYARSNNLDEA 413
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 37/227 (16%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L C N L +Q+H ++++ G + L+ +Y G + A F +I +
Sbjct: 33 LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH-----TGLVEKG 526
+WN +I +G + ALML+++M GI D T ++ AC++ G V G
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 527 TEYFYSMNRDYGV-------------------------IPNSKHYTCMVDLLGRAGRLDE 561
+ Y + D V + N +T ++ L G L E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
A+ + +P + +W A++ Y + + E+A E+ M+ EN
Sbjct: 210 ARRIFDEIP-SKNVVSWTAMING---YIRNQQPEEALELFKRMQAEN 252
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/743 (34%), Positives = 394/743 (53%), Gaps = 84/743 (11%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
DLV+ + K++ A LF +P D+ +N ++ ++ N +A ++
Sbjct: 39 HNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTH 98
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW------EVVSWNSLMGGFVKQKRLG 233
+ + + + A+V +G L + ++ ++++ + K R+
Sbjct: 99 LRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVA 158
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------------------A 273
A+ +FD M RD V WNTM++G +N+ EA +F + A
Sbjct: 159 AARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVA 218
Query: 274 PVKDV-------------------FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
++D+ + T + Y + G+++ AR++F + + + VS+NA
Sbjct: 219 ELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNA 278
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG------------------------- 349
MI+GY + + LF+ + ++ I G
Sbjct: 279 MISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSG 338
Query: 350 --------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
Y++ EI AR LFD + SW A+I+GYAQ+G +E ++ LF
Sbjct: 339 VVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQ 398
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM++ R N TS+LS CA L +L LGK +H + + FE+ FV AL+ MY KCG
Sbjct: 399 EMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCG 458
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
S+ EA F + +K+ ++WN MI+GY HG+G +AL LF M + P +T + +L
Sbjct: 459 SITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLY 518
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH GLV +G E F SM D+G P +HY CMVDLLGRAG LD+A + ++ MP EP
Sbjct: 519 ACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGP 578
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
WGALLGAC ++ LA A++ +FE++P+N G YVLLSN+Y+A + + + VR +
Sbjct: 579 PVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVV 638
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+ R + K G + +EV N +H F+ GD HP+ IYA LE+L K+++ GF T L
Sbjct: 639 KRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTAL 698
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HDV EEEKE M++ HSEKLA+A+G+++ G IR++KNLRVC DCHNA K ISKI R+
Sbjct: 699 HDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERV 758
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I++RD NRFHHF G CSCGDYW
Sbjct: 759 IVVRDANRFHHFKDGICSCGDYW 781
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 165/403 (40%), Gaps = 95/403 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISG-------------- 101
D WN ++ ++N C D A+ +F M + S + A++ G
Sbjct: 171 DTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQ 230
Query: 102 ------------YLLN---------GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
Y++ G+++ AR +F Q+ Q DLVS+N MISGY N
Sbjct: 231 CLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETE 290
Query: 141 AARNLF-EMMPKRDVVSWNTML-------------------------------------- 161
++ LF E++ + V+ ++++
Sbjct: 291 SSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALT 350
Query: 162 SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----V 217
+ Y++ ++AR +FD EK+ SWN +++ Y QNG E+A LF+ EV V
Sbjct: 351 TVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPV 410
Query: 218 SWNSLMGGFVKQKRLGDAKWIFD---RMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEA 273
+ S++ + L KW+ D R + +T +I YA+ + EAQRLF
Sbjct: 411 TVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMM 470
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMAR 329
P K+ TW AM+SGY +G EA +F+ M V++ +++ +
Sbjct: 471 PEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGD 530
Query: 330 ELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMP 367
E+F +M + + M+ ++G + A + +MP
Sbjct: 531 EIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMP 573
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 294/845 (34%), Positives = 447/845 (52%), Gaps = 142/845 (16%)
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
+G D A VF+ + R+SV++N++IS Y G A ++F M Q + V N+ + Y
Sbjct: 292 SGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVM-QMEGVELNLRPNEY 350
Query: 134 VRNKSLSAARNLF--------EMMPK-------RDVVSWNTMLSGYAQNGYADAARRIFD 178
++AA +L +M+ + RD+ + +++G+A+ G D A+ IF
Sbjct: 351 TLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFK 410
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFES---------------------------- 210
+M ++N ++ NGL+ + + EEA +F+
Sbjct: 411 QMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEG 470
Query: 211 -KANWEVVSW--------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ EV ++ N+L+ + K + +A +F MP +D VSWN+MI+
Sbjct: 471 KRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMIS 530
Query: 256 GYAQNNYLAEAQRLFEE------APVK--------------------------------- 276
G N EA F P
Sbjct: 531 GLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDL 590
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ-----TKRMDMAREL 331
DV A+++ Y + ++E + +F MPE + VSWN+ I + + + E+
Sbjct: 591 DVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEM 650
Query: 332 FEA------MTCKNV-----------------------------ASWNTMITGYAQSGEI 356
+A +T N+ A N ++ Y + ++
Sbjct: 651 MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQM 710
Query: 357 THARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+F RM + D +SW ++I+GY SG ++ L M + G++L+ F +VLS
Sbjct: 711 EDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSA 770
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA++A+LE G ++H V+ E+ VG+AL+ MY KCG ++ A FE + +++ SW
Sbjct: 771 CASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSW 830
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N+MI+GYARHG G+ AL +F MK G PD +T VG+LSACSH GLV++G ++F SM
Sbjct: 831 NSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGE 890
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA-CRLYGK-TEL 593
YG+ P +H++CMVDLLGRAG + + ++ +K MP +P+ W +LGA CR G+ TEL
Sbjct: 891 VYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTEL 950
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
++AA+++ E+EP+NA YVLLSN++AA G W DV + RL MR VKK G SW+ +++
Sbjct: 951 GQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKD 1010
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
VH F GD HPEK++IY L+EL K++ G+V TK L+D+ E KE +L YHSEK
Sbjct: 1011 GVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEK 1070
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+A+ +L+ + PIR+MKNLRVC DCH A K+ISKIVGR IILRD+NRFHHF GG CS
Sbjct: 1071 LAIAF-VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCS 1129
Query: 774 CGDYW 778
CGDYW
Sbjct: 1130 CGDYW 1134
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 166/692 (23%), Positives = 289/692 (41%), Gaps = 157/692 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I ++R G SA +F+ MP+++ VS++ +ISGY N D A +F +
Sbjct: 174 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVI 233
Query: 120 QRDLVSWNVMISGYVR------NKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQ-NG 168
L+ + + +R + + + + K D++ N ++S Y+ +G
Sbjct: 234 SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSG 293
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN-------- 220
D A R+FD + +N ++WN +++ Y + G A LF S E V N
Sbjct: 294 SIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLF-SVMQMEGVELNLRPNEYTL 352
Query: 221 --------------------------------------SLMGGFVKQKRLGDAKWIFDRM 242
+L+ GF + + AK IF +M
Sbjct: 353 CSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQM 412
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF------------TWT-------- 282
R+ V+ N ++ G A+ + EA ++F+E +KD+ T+T
Sbjct: 413 YDRNAVTMNGLMVGLARQHQGEEAAKVFKE--MKDLVEINSESLVVLLSTFTEFSNLKEG 470
Query: 283 -------------------------AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
A+V+ Y + +D A +F MP K+TVSWN+MI+
Sbjct: 471 KRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMIS 530
Query: 318 GYVQTKRMDMARELFEAM-----------------TCK---------------------- 338
G +R + A F M +C
Sbjct: 531 GLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDL 590
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE-DSLRLFIEM 397
+V+ N ++T YA++ I + +F +MP++D +SW + I A+ S +L+ F+EM
Sbjct: 591 DVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEM 650
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+ G R NR F ++L+ ++ + L LG Q+H ++K + NALL Y KC +
Sbjct: 651 MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQM 710
Query: 458 EEAYHAFEEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
E+ F + + +D +SWN+MI+GY G A+ L M G K D T +LSA
Sbjct: 711 EDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSA 770
Query: 517 CSHTGLVEKGTEYFYSMNR---DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
C+ +E+G E R + V+ S +VD+ + G++D A + MP
Sbjct: 771 CASVATLERGMEVHACAVRACLESDVVVGSA----LVDMYAKCGKIDYASRFFELMPVR- 825
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ +W +++ Y + +KA ++ M+
Sbjct: 826 NIYSWNSMISG---YARHGHGQKALKIFTRMK 854
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 54/367 (14%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+L++ DVF +++ YV+ G + AR +FD MP+KN VSW+ +I+GY Q + D
Sbjct: 165 QLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDE 224
Query: 328 ARELFE------------------------------------AMTCK-----NVASWNTM 346
A LF+ A CK ++ N +
Sbjct: 225 ACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVL 284
Query: 347 ITGYAQ-SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y+ SG I A +FD + + ++W +II+ Y + G + + +LF M+ G LN
Sbjct: 285 MSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELN 344
Query: 406 RSP----FTSVLSTCANLAS--LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
P S+++ +LA L L +Q+ ++ K GF +VG+AL+ + + G ++
Sbjct: 345 LRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDC 404
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F+++ D++ ++ N ++ G AR G++A +F+ MK + ++ + ++V +LS +
Sbjct: 405 AKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFTE 463
Query: 520 -TGLVE---KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
+ L E KG E + R V +V++ G+ +D A ++ + MP D
Sbjct: 464 FSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP-SKDT 522
Query: 576 ATWGALL 582
+W +++
Sbjct: 523 VSWNSMI 529
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 122/303 (40%), Gaps = 55/303 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY--------------- 102
D D+ N +T + + VF MP VS+N+ I
Sbjct: 589 DLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFL 648
Query: 103 -LLNGQLDPARQVFDQM------------------------PQRDLVSWNVMISGYVRNK 137
++ P R F + D N +++ Y + +
Sbjct: 649 EMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCE 708
Query: 138 SLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE----ISWNGLL 192
+ +F M +RD VSWN+M+SGY +G A + M+++ + ++ +L
Sbjct: 709 QMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVL 768
Query: 193 AAYVQNGRIE-----EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+A +E AC + + +VV ++L+ + K ++ A F+ MPVR+
Sbjct: 769 SACASVATLERGMEVHACAV-RACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNI 827
Query: 248 VSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
SWN+MI+GYA++ + +A ++F + D T+ ++S G VDE F +
Sbjct: 828 YSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKS 887
Query: 304 MPE 306
M E
Sbjct: 888 MGE 890
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+SL LH QL K GF F N L+ +Y + G++ A F+E+ K+++SW+ +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
+GY ++ +A LF+ + + G+ P+ + L AC G G + ++
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG--STGIKLGMQIHAFICK 271
Query: 540 IPNSKHYTCMVDLL----------GRAGRLDEAQNLMKNMPFEPDAATWGALLGA-CR 586
+P C+ D++ +G +D+A + + F ++ TW +++ CR
Sbjct: 272 LP------CVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFR-NSVTWNSIISVYCR 322
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/670 (37%), Positives = 396/670 (59%), Gaps = 28/670 (4%)
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG-YADAARRIFDRMLEKNEISWNGL 191
+VR + AR +F+ P R W +SG A+ G YAD R F ML + E + N
Sbjct: 55 WVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMR-AFAEMLAEGEATPNAF 113
Query: 192 LAAYV----------QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ A V ++G+ ML + + +VV N+++ + K + A+ +F
Sbjct: 114 VLAAVVRCCAGMGDVESGKRVHGWML-RNGVHLDVVLCNAVLDMYAKCGQFERARRVFGA 172
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
M RD VSWN I Q+ + + +LF+E+P++D +W ++SG +++G +A
Sbjct: 173 MAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHL 232
Query: 302 DAMPEKNTV------SWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYA 351
M + V S ++AG + D+ R+L A + ++++ Y
Sbjct: 233 RRMAQAGVVFNHYTYSTAFVLAGMLLLP--DLGRQLHGRVLIAALEGDAFVRSSLMDMYC 290
Query: 352 QSGEITHARNLFDR---MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ G + A ++FD + + +W+ ++AGY Q+G E++L LF M R G +R
Sbjct: 291 KCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFT 350
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
TSV + CAN+ +E G+Q+HG + K+ ++ + +A++ MY KCG++E+A F+
Sbjct: 351 LTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRAC 410
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
K++ W +M+ YA HG G+ A+ LFE M + P++IT+VG+LSACSH GLV +G
Sbjct: 411 TKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGEL 470
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF M +YG++P+ +HY C+VDL GR+G LD+A+N ++ +A W LL ACRL+
Sbjct: 471 YFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLH 530
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
E A+ A+E + ++E +AG YV+LSN+YA + +W D ++R+ M++R V+K G SW
Sbjct: 531 QHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSW 590
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
+ ++N VHTF GD HP+ IYAYLE+L +LK+ G+ T LV+HDV +E++E L+
Sbjct: 591 IHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALK 650
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
+HSEKLA+A+GI+S P+G P+R+ KNLRVCEDCH AIK+IS GR I++RD RFHHF
Sbjct: 651 FHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFK 710
Query: 769 GGSCSCGDYW 778
SCSC D+W
Sbjct: 711 DASCSCEDFW 720
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 197/386 (51%), Gaps = 14/386 (3%)
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-----APV 275
S++ +V+++R DA+ +FD P R W I+G A+ A+ R F E
Sbjct: 50 SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAREL 331
+ F A+V G V+ + + M + V NA++ Y + + + AR +
Sbjct: 110 PNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRV 169
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F AM ++ SWN I QSG+I + LFD P D SW II+G +SG++ D+L
Sbjct: 170 FGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADAL 229
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
M + G N +++ L +LG+QLHG+++ E FV ++L+ MY
Sbjct: 230 SHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMY 289
Query: 452 CKCGSVEEAYHAFEE--IVDKDV-ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
CKCG +E A F+ + +D+ +W+TM+AGY ++G ++AL LF M G+ D
Sbjct: 290 CKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRF 349
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T+ + +AC++ G+VE+G + + + + + ++ + +VD+ + G L++A+++ +
Sbjct: 350 TLTSVAAACANVGMVEQGRQVHGCVEKLWYKL-DAPLASAIVDMYAKCGNLEDARSIF-D 407
Query: 569 MPFEPDAATWGALLGACRLYGKTELA 594
+ A W ++L + +G+ +A
Sbjct: 408 RACTKNIAVWTSMLCSYASHGQGRIA 433
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 183/425 (43%), Gaps = 54/425 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA++ Y GQ + AR+VF M +RD VSWN+ I +++ + + LF+ P RD
Sbjct: 151 NAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTT 210
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEI------SWNGLLAAYV---QNGRIEEACM 206
SWNT++SG ++G+A A RM + + S +LA + GR +
Sbjct: 211 SWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRV 270
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP--VRD-EVSWNTMITGYAQNNYL 263
L + V +SLM + K L A +FD RD +W+TM+ GY QN
Sbjct: 271 LIAALEGDAFVR-SSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGRE 329
Query: 264 AEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAM 315
EA +R+ E D FT T++ + G V++ R + + + + +A+
Sbjct: 330 EEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAI 389
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
+ Y + ++ AR +F+ KN+A W +M+ YA G+ A LF+RM
Sbjct: 390 VDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTP-- 447
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-K 434
N VLS C+++ + G+ Q+ +
Sbjct: 448 -----------------------------NEITLVGVLSACSHVGLVSEGELYFKQMQEE 478
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE-IVDKDVISWNTMIAGYARHGFGKDALM 493
G N ++ +Y + G +++A + EE ++ + I W T+++ H + A +
Sbjct: 479 YGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKL 538
Query: 494 LFESM 498
E +
Sbjct: 539 ASEKL 543
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 165/369 (44%), Gaps = 37/369 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + + + G + A VF +M R +VS+N I + +G + + Q+FD+ P
Sbjct: 146 DVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESP 205
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSGYAQNGYADAARR 175
RD SWN +ISG +R+ + A + M + VV +++T D R+
Sbjct: 206 LRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQ 265
Query: 176 IFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS------WNSLMGG 225
+ R+ LE + + L+ Y + G +E A +F+ +W ++ W++++ G
Sbjct: 266 LHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFD---HWSPLTRDMNFAWSTMVAG 322
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWN----TMITGYAQNNYLAEAQRLFEEAPVK----- 276
+V+ R +A +F RM +R+ V+ + T + N + E R K
Sbjct: 323 YVQNGREEEALDLFRRM-LREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKL 381
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D +A+V Y + G +++AR IFD KN W +M+ Y + +A ELFE MT
Sbjct: 382 DAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMT 441
Query: 337 CKNVASWNTMITGY----AQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQSGYS 387
+ + + G + G ++ F +M + I + I+ Y +SG
Sbjct: 442 AEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLL 501
Query: 388 EDSLRLFIE 396
D + FIE
Sbjct: 502 -DKAKNFIE 509
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/744 (35%), Positives = 413/744 (55%), Gaps = 61/744 (8%)
Query: 96 NAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
N ++ G+L+ G + A+QVF+ + ++D+ +W MI Y + A +F M
Sbjct: 39 NNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQ 98
Query: 151 KRDV----VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIE 202
+ DV V++ +L+ A I ++L E + L+ Y + G +
Sbjct: 99 EEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVR 158
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYA 258
A F+ + +VVSW +++ V+ + A+W++ RM V ++++ T+ Y
Sbjct: 159 GAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYG 218
Query: 259 QNNYLAE-----------------------------------AQRLFEEAPVKDVFTWTA 283
+YL+E A+RLFE+ +DV TW
Sbjct: 219 DPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNI 278
Query: 284 MVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFE----AM 335
+++ YVQN EA +F + + N +++ M+ Y + + + E A
Sbjct: 279 VITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAG 338
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++V +++ Y + A +F M D I+W + YAQ+G+ +++L+LF
Sbjct: 339 YDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQ 398
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM+ G R + +VL TCA+LA+L+ G+Q+H +++ GF V AL+ MY KCG
Sbjct: 399 EMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCG 458
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ EA FE++ +D++ WN+M+ YA+HG+ + L LF M+ G K D ++ V +LS
Sbjct: 459 KMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLS 518
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL-MKNMPFEPD 574
A SH+G V G +YF +M +D+ + P + Y C+VDLLGRAGR+ EA ++ +K PD
Sbjct: 519 ALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPD 578
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
W LLGACR + KT+ A+ AAE + E +P ++G YV+LSN+YAA+G W V+++R
Sbjct: 579 GILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKL 638
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
MR RGVKK G S +E+ N+VH F GD HP + IYA L+ L +++ G++ TK++
Sbjct: 639 MRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMI 698
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
LHDV +E KE ML YHSE+LA+A+G++S P G P+RV+KNLRVC DCH A K+ISK+ GR
Sbjct: 699 LHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGR 758
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
I++RD +RFH+F G CSC DYW
Sbjct: 759 EILVRDTHRFHNFKDGRCSCKDYW 782
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 225/490 (45%), Gaps = 53/490 (10%)
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACM 206
K D + +L + D RR+ DR E+N + L+ Y Q G + EA
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNY 262
+FE +V +W ++G + +Q A +F +M D +V++ ++ A
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 263 LAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
L + ++ ++ DVF TA+++ Y + G V A F + ++ VSW AMIA
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181
Query: 319 YVQTKRMDMARELFEAMTCKNVAS------------------------------------ 342
VQ + +AR L+ M V
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241
Query: 343 ---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N+ + + +G + AR LF+ M D ++W +I Y Q+ +++RLF +++
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQ 301
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G + N F +L+ +L SL GK +H + + G++ V AL+ +Y +C + +
Sbjct: 302 DGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQ 361
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A+ F ++ KDVI+W M YA++GF K+AL LF+ M+ G +P T+V +L C+H
Sbjct: 362 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 421
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
++KG + +S + G T ++++ G+ G++ EA+++ + M + D W
Sbjct: 422 LAALQKGRQ-IHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDILVWN 479
Query: 580 ALLGACRLYG 589
++LGA +G
Sbjct: 480 SMLGAYAQHG 489
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPAR 112
G D+ W V + +NG AL +F M R +S + A++ L R
Sbjct: 370 GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGR 429
Query: 113 QVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+ + + ++V +I+ Y + ++ AR++FE M KRD++ WN+ML YAQ+G
Sbjct: 430 QIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHG 489
Query: 169 YADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIEEACMLFESK-ANWEVVSWNSLM 223
Y D ++F++M E +S+ +L+A +G + + F + ++ + L
Sbjct: 490 YYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELY 549
Query: 224 GGFV----KQKRLGDAKWIFDRMP--VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
G V + R+ +A I ++ + D + W T++ +N +A+ E+ +D
Sbjct: 550 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD 609
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 477 bits (1228), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/568 (42%), Positives = 346/568 (60%), Gaps = 41/568 (7%)
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
++I YA + A+ +F+++ ++D ++TA+++GYV G +D+AR +FD +P K+ VS
Sbjct: 171 SVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVS 230
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNV--------------------------ASW-- 343
WNAMI+GYVQ+ R + A F M NV SW
Sbjct: 231 WNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVR 290
Query: 344 -----------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
N +I Y + GE AR LFD + + D ISW +I GY+ E++L
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMY 451
LF M R + N F +L CA L +L+LGK +H + K + + + +L+ MY
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMY 410
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI-KPDDITM 510
KCG +E A F + +++ SWN M++G+A HG + AL LF M G+ +PDDIT
Sbjct: 411 AKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITF 470
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
VG+LSAC+ GLV+ G +YF SM +DYG+ P +HY CM+DLL RA + +EA+ LMKNM
Sbjct: 471 VGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNME 530
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
EPD A WG+LL AC+ +G+ E E AE +F++EPENAG +VLLSN+YA +GRW DV++
Sbjct: 531 MEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVAR 590
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
+R ++ D+G+KKV G + +E+ VH F VGD HPE + IY L E++ L+++GFV +
Sbjct: 591 IRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPN 650
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
T VL+D+ EE KE L HSEKLA+++G++ G IR++KNLRVC +CH+A K ISK
Sbjct: 651 TSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISK 710
Query: 751 IVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I R II RD NRFHHF G CSC D W
Sbjct: 711 IFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 206/490 (42%), Gaps = 86/490 (17%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+ ++I Y G++D AR VFD+ RD VS+ +I+GYV L AR LF+ +P +DV
Sbjct: 169 HTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDV 228
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
VSWN M+SGY Q+G + A F M E N + + + + L + +W
Sbjct: 229 VSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSW 288
Query: 215 --------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ N+L+ + K A+ +FD + +D +SWNTMI GY+ + EA
Sbjct: 289 VRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEA 348
Query: 267 QRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPE-----KNTVSWNAMIA 317
LFE +V T+ ++ G +D + + + + N W ++I
Sbjct: 349 LALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLID 408
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + ++ A +F +M +N+ASWN M++G+
Sbjct: 409 MYAKCGCIEAAERVFRSMHSRNLASWNAMLSGF--------------------------- 441
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
A G++E +L LF EM G R + F VLS C ++LG Q +++
Sbjct: 442 ----AMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQ-- 495
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ + + + MI AR ++A +L
Sbjct: 496 ----------------------------DYGISPKLQHYGCMIDLLARAEKFEEAEIL-- 525
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGR 555
MK + ++PD +LSAC G VE G Y R + + P N+ + + ++
Sbjct: 526 -MKNMEMEPDGAIWGSLLSACKAHGRVEFGE---YVAERLFQLEPENAGAFVLLSNIYAG 581
Query: 556 AGRLDEAQNL 565
AGR D+ +
Sbjct: 582 AGRWDDVARI 591
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 83/420 (19%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
D A VF+ R +VS+ A+I+GY+ G LD AR++FD++P +D+VSWN MISGYV++
Sbjct: 183 DFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSG 242
Query: 138 SLSAARNLFEMMPKRDVV--------------------------SW-------------N 158
A F M + +V+ SW N
Sbjct: 243 RFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTN 302
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANW 214
++ Y + G D AR +FD + EK+ ISWN ++ Y EEA LFE S
Sbjct: 303 ALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKP 362
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMP--VRDEVS---WNTMITGYAQNNYLAEAQRL 269
V++ ++ L KW+ + +R+ + W ++I YA+ + A+R+
Sbjct: 363 NDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERV 422
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-----NTVSWNAMIAGYVQTKR 324
F +++ +W AM+SG+ +G + A +F M K + +++ +++ Q
Sbjct: 423 FRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGL 482
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+D+ + F +MI Y S ++ H + D + + + A I+
Sbjct: 483 VDLGHQYFR-----------SMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL------ 525
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE-AGCFV 443
MK + + + S+LS C +E G+ + +L ++ E AG FV
Sbjct: 526 ------------MKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFV 573
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 40/288 (13%)
Query: 351 AQSGEITHARNLFDRMPQ---HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
+ SG++++A +LF+ Q H+ W ++I GY+ S SL LF M YG + N
Sbjct: 73 SPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSH 132
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS----------- 456
F + +C + GKQLH +K+ V +++ MY G
Sbjct: 133 TFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKS 192
Query: 457 --------------------VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+++A F+EI KDV+SWN MI+GY + G ++A++ F
Sbjct: 193 SLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFY 252
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M+ + P+ TMV +LSAC HT E G ++ S RD G N + ++D+ +
Sbjct: 253 EMQEANVLPNKSTMVVVLSACGHTRSGELG-KWIGSWVRDNGFGSNLQLTNALIDMYCKC 311
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
G D A+ L + E D +W ++G Y L E+A +FE+
Sbjct: 312 GETDIARELFDGIE-EKDVISWNTMIGG---YSYLSLYEEAL-ALFEV 354
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 50/265 (18%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC---GSVEEA 460
L + P+ ++L C N+ + KQ+H ++K G FV + L+ +C G + A
Sbjct: 26 LEQHPYLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFV-QSKLIHFCAVSPSGDLSYA 81
Query: 461 YHAFEEIVD---KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
FEE +V WN++I GY+ +L LF M G++P+ T + +C
Sbjct: 82 LSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSC 141
Query: 518 S--------------------------HTGLVEK----GTEYFYSMNRDYGVIPNSKHYT 547
+ HT ++ G F + D + ++ +T
Sbjct: 142 TKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFT 201
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME-- 605
++ G LD+A+ L +P + D +W A++ Y ++ E+A +EM+
Sbjct: 202 ALITGYVSQGCLDDARRLFDEIPVK-DVVSWNAMISG---YVQSGRFEEAIVCFYEMQEA 257
Query: 606 ---PENAGMYVLLSNL-YAASGRWG 626
P + M V+LS + SG G
Sbjct: 258 NVLPNKSTMVVVLSACGHTRSGELG 282
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/636 (37%), Positives = 379/636 (59%), Gaps = 24/636 (3%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ +R G +A +F+++P RS V++N++++G AR+ FD MP RD V
Sbjct: 40 NRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAV 99
Query: 125 SWNVMISGYVRNKS---LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
SWN +++ Y + L+AAR LF+ MP+RDVV+WNT+L YA+ G D ARR+FD M
Sbjct: 100 SWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMP 159
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF-D 240
++N SWN ++ + G++ +A +F++ + S ++++ GF K L +A+ +
Sbjct: 160 QRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTK 219
Query: 241 RMPVRDEV----SWNTMITGYAQNNYLAEAQRLFEEAPV--------------KDVFTWT 282
R+ V D ++NT+I Y Q ++A+RLF+ P ++V +W
Sbjct: 220 RLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWN 279
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
+M+ Y++ G V AR +F+ MP+K+ VSWN MI+GY Q M + +LF M + S
Sbjct: 280 SMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVS 339
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN +I G+ Q GE HAR FDRMP+ ISW +I+GY ++G S++LF +M GE
Sbjct: 340 WNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGE 399
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+R F+SVL+ CA++ L LG Q+H QLV+ F + NAL+ MY +CG++ +A
Sbjct: 400 IPDRHTFSSVLAACASIPMLGLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEA 458
Query: 463 AFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+++ KD++SWN +I Y HG AL LF+ M+ + P IT V +LSAC + G
Sbjct: 459 IFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAG 518
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV +G F +M +YG++ +HY +V+L+GR G+LD+A ++ +MP PD + WGA
Sbjct: 519 LVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAF 578
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGAC LA+ AA+ + + P+++ YVL+ NL+A G+WG + VR +M +G+
Sbjct: 579 LGACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIY 638
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
K GYSW++++ K+H F GDT HP I++ LE+
Sbjct: 639 KQPGYSWIDLEGKMHVFISGDTWHPNAQEIFSVLED 674
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/751 (34%), Positives = 413/751 (54%), Gaps = 61/751 (8%)
Query: 89 RRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
R N ++ G+L+ G + A+QVF+ + ++D+ +W MI Y + A
Sbjct: 31 RDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRAL 90
Query: 144 NLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAY 195
+F M + DV V++ +L+ A I ++L E + L+ Y
Sbjct: 91 GMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMY 150
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWN 251
+ G + A F+ + +VVSW +++ V+ + A+W++ RM V ++++
Sbjct: 151 NKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLY 210
Query: 252 TMITGYAQNNYLAE-----------------------------------AQRLFEEAPVK 276
T+ Y NYL+E A+RLFE+ +
Sbjct: 211 TVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDR 270
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELF 332
DV TW +++ YVQN EA +F + + N +++ M+ Y + + +
Sbjct: 271 DVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIH 330
Query: 333 E----AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
E A ++ +++ Y + A +F M D I+W + YAQ+G+ +
Sbjct: 331 ELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRK 390
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++L+LF EM+ G R + +VL TCA+LA+L+ G+Q+H +++ F V AL+
Sbjct: 391 EALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALI 450
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG + EA FE++ +D++ WN+M+ YA+HG+ + L LF M+ G+K D +
Sbjct: 451 NMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAV 510
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL-MK 567
+ V +LSA SH+G V G +YF +M +D+ + P + Y C+VDLLGRAGR+ EA ++ +K
Sbjct: 511 SFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLK 570
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
PD W LLGACR + KT+ A+ AAE + E +P ++G YV+LSN+YAA+G W
Sbjct: 571 LSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDG 630
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
V+++R MR RGVKK G S +E+ N+VH F GD HP + IYA L+ L +++ G+
Sbjct: 631 VNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGY 690
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
+ TK++LHDV +E KE ML YHSE+LA+A+G++S P G P+RV+KNLRVC DCH A K+
Sbjct: 691 IPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKY 750
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISK+ GR I++RD +RFH+F G CSC DYW
Sbjct: 751 ISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 223/495 (45%), Gaps = 63/495 (12%)
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACM 206
K D + +L + D RR+ DR E+N + L+ Y Q G + EA
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNY 262
+FE +V +W ++G + +Q A +F +M D +V++ ++ A
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 263 LAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
L + ++ ++ DVF TA+++ Y + G V A F + ++ VSW AMIA
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 319 YVQTKRMDMARELFEAMTCKNVAS------------------------------------ 342
VQ + +AR L+ M V
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 343 ---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N+ + + +G + AR LF+ M D ++W +I Y Q+ +++RLF +++
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G + N F +L+ +L SL GK +H + + G++ V AL+ +Y +C + +
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ 360
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A+ F ++ KDVI+W M YA++GF K+AL LF+ M+ G +P T+V +L C+H
Sbjct: 361 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 420
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHY-----TCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
++KG + +I N T ++++ G+ G++ EA ++ + M + D
Sbjct: 421 LAALQKGRQIHSH------IIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRD 473
Query: 575 AATWGALLGACRLYG 589
W ++LGA +G
Sbjct: 474 ILVWNSMLGAYAQHG 488
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F ++L C++ +++ G+++H + GFE V L+ MY +CGSV EA FE +
Sbjct: 7 FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
KDV +W MI Y + G AL +F M+ + P +T V IL+AC+ T ++ G E
Sbjct: 67 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 126
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+ G + T ++++ + G + A + K + D +W A++ AC +
Sbjct: 127 -IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMIAACVQH 184
Query: 589 GKTELA 594
+ LA
Sbjct: 185 DQFALA 190
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 112/240 (46%), Gaps = 19/240 (7%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPAR 112
G D+ W V + +NG AL +F M R +S + A++ L R
Sbjct: 369 GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGR 428
Query: 113 QVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+ + + ++V +I+ Y + ++ A ++FE M KRD++ WN+ML YAQ+G
Sbjct: 429 QIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHG 488
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESK-ANWEVVSWNSLM 223
Y D ++F++M ++ + +S+ +L+A +G + + F + ++ + L
Sbjct: 489 YYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELY 548
Query: 224 GGFV----KQKRLGDAKWIFDRMP--VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
G V + R+ +A I ++ + D + W T++ +N +A+ E+ +D
Sbjct: 549 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD 608
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/673 (36%), Positives = 392/673 (58%), Gaps = 23/673 (3%)
Query: 129 MISGYVRNKSLSAARNLFEMM-PKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEK 183
+I+ Y + +++ ++F + P +V WN+++ NG A ++ L+
Sbjct: 54 LIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQP 113
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIF 239
+ ++ ++ A E A + + + ++ N+L+ + + L A+ +F
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVF 173
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQ-------RLFEEAPVK---DVFTWTAMVSGYV 289
+ MP+RD VSWN++I+GY N Y EA +LF E + D+ T T+++
Sbjct: 174 EEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACG 233
Query: 290 QNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
G ++ + + D M E +T + N +I Y + + ++E+F M CK+ SWN+
Sbjct: 234 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 293
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MI Y Q+G++ + +F+ M D I+W IIA S LR+ M+ G +
Sbjct: 294 MINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPD 353
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+ S+L C+ LA+ GK++HG + K+G E+ VGN L+ MY KCGS+ ++ F+
Sbjct: 354 MATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK 413
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ KDV++W +I+ +G GK A+ F M+ GI PD + V I+ ACSH+GLVE+
Sbjct: 414 LMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEE 473
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G YF+ M +DY + P +HY C+VDLL R+ LD+A++ + +MP +PD++ WGALL AC
Sbjct: 474 GLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSAC 533
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R+ G TE+AE+ +E I E+ P++ G YVL+SN+YAA G+W V +R ++ RG+KK G
Sbjct: 534 RMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPG 593
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
SW+E+QNKV+ F G + + + L L + ++G++ + + VLHD+ E+EK
Sbjct: 594 CSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRD 653
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
+L HSE+LA+A+G+L+ G P++VMKNLRVCEDCH K+ISKIV R +++RD NRFH
Sbjct: 654 ILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFH 713
Query: 766 HFSGGSCSCGDYW 778
F G+CSCGDYW
Sbjct: 714 VFKDGACSCGDYW 726
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/548 (21%), Positives = 224/548 (40%), Gaps = 81/548 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMISGYLLNGQLDPARQVF 115
++ WN I NG AL +++ R + ++ ++I+ + A+ +
Sbjct: 79 NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138
Query: 116 DQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
D++ DL N +I Y R L AR +FE MP RDVVSWN+++SGY NGY +
Sbjct: 139 DRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 198
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC--------------MLFESKANWEVV 217
A I+ + ++ N + I +AC + S +
Sbjct: 199 EALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTT 258
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+ N L+ + K L ++ +F M +D VSWN+MI Y QN + ++ ++FE +D
Sbjct: 259 ASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARD 318
Query: 278 VFTWTAMVSGYVQNGKVDEA-RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ TW +++ V + + RMI E T M++ + R+ E
Sbjct: 319 IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHG 378
Query: 337 C-------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
C +V N +I Y++ G + ++ +F M D ++W A+I+ G +
Sbjct: 379 CIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKK 438
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
++R F EM+ G + F +++ C++
Sbjct: 439 AVRAFGEMEAAGIVPDHVAFVAIIFACSH------------------------------- 467
Query: 450 MYCKCGSVEEAYHAFEEI-----VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
G VEE + F + ++ + + ++ +R A SM +K
Sbjct: 468 ----SGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMP---LK 520
Query: 505 PDDITMVGILSACSHTG---LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
PD +LSAC +G + E+ +E +N D ++ +Y + ++ G+ D+
Sbjct: 521 PDSSIWGALLSACRMSGDTEIAERVSERIIELNPD-----DTGYYVLVSNIYAALGKWDQ 575
Query: 562 AQNLMKNM 569
+++ K++
Sbjct: 576 VRSIRKSI 583
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 270/807 (33%), Positives = 425/807 (52%), Gaps = 126/807 (15%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR------NKSLSAARNLFEMMP 150
A+++ YL G++ + +F++MP RD+V WN+M+ Y+ LS+A + + P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 151 KR--------------------------------DVVSWNTMLSGYAQNGYADAARRIFD 178
+++ N LS Y +G A + F
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFA 304
Query: 179 RMLEKN----EISWNGLLAAYVQNGRI----EEACMLFESKANWEVVSWNSLMGGFVKQK 230
M+E + ++++ +LA V+ + + CM + + + NSL+ + K +
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA----------------- 273
+ G A+ +FD M RD +SWN++I G AQN EA LF +
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 274 -----------------------PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
V D F TA++ Y +N + EA ++F+ + V
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLV 483
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWNT-------- 345
+WNAM+AGY Q+ +LF M TC + + N
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 346 --------------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
++ Y + G+++ A+ FD +P D ++W +I+G ++G E +
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+F +M+ G + ++ + L +LE G+Q+H +K+ FVG +L+ MY
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCGS+++AY F+ I ++ +WN M+ G A+HG GK+ L LF+ MK++GIKPD +T +
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+LSACSH+GLV + ++ SM+ DYG+ P +HY+C+ D LGRAG + +A+NL+++M
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
E A+ + LL ACR+ G TE ++ A + E+EP ++ YVLLSN+YAA+ +W ++
Sbjct: 784 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 843
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R M+ VKK G+SW+EV+NK+H F V D + + + IY ++++ +KQ+G+V T
Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET 903
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
L DV EEEKE L YHSEKLAVA+G+LS P PIRV+KNLRVC DCHNA+K+I+K+
Sbjct: 904 DFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKV 963
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
R I+LRD NRFH F G CSCGDYW
Sbjct: 964 YNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 146/564 (25%), Positives = 265/564 (46%), Gaps = 74/564 (13%)
Query: 96 NAMISGYLLNGQLDPARQV-FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
NA+ S L+ G+ AR + F++ P+R L+ N +IS Y + SL+ AR +F+ MP RD+
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 155 VSWNTMLSGYAQNGYA-----DAARRIFDRMLEKN-----EISWNGLLAAYVQNGRI--E 202
VSWN++L+ YAQ+ A +F R+L ++ ++ + +L + +G +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 203 EACMLFESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
E+ + K E V+ +L+ ++K ++ + K +F+ MP RD V WN M+ Y +
Sbjct: 165 ESFHGYACKIGLDGDEFVA-GALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 260 NNYLAEA------------------QRLF--------------------EEAPVKDVFTW 281
+ EA RL + + V ++
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTC 337
+S Y+ +G+ F M E + V++ M+A V+ + + +++ M
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQV-HCMAL 342
Query: 338 K-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
K + N++I Y + + AR +FD M + D ISW ++IAG AQ+G +++
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLAS-LELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF+++ R G + ++ TSVL ++L L L KQ+H +K+ + FV AL+ Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
+ ++EA FE + D+++WN M+AGY + G L LF M G + DD T+
Sbjct: 463 SRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 512 GILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+ C + +G + + Y++ Y + + + ++D+ + G + AQ ++P
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 571 FEPDAATWGALLGACRLYGKTELA 594
PD W ++ C G+ E A
Sbjct: 580 V-PDDVAWTTMISGCIENGEEERA 602
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 207/454 (45%), Gaps = 63/454 (13%)
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+N I+ + L+ + RI + FE N E N+L+ + K L A+ +FD+M
Sbjct: 47 RNAITSSDLMLGKCTHARI----LTFEE--NPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 243 PVRDEVSWNTMITGYAQNNY-----LAEAQRLFE-------------EAPV--------- 275
P RD VSWN+++ YAQ++ + +A LF +P+
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 276 -----------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
D F A+V+ Y++ GKV E +++F+ MP ++ V WN M+
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ-SGEITHARNLFDRMPQHDCISWAAI 377
Y++ + A +L A + + A+ SG+ + A + +D S + I
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEI 280
Query: 378 I------AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
I + Y SG L+ F +M ++ F +L+T + SL LG+Q+H
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+K+G + V N+L+ MYCK A F+ + ++D+ISWN++IAG A++G +A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHT--GLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+ LF + G+KPD TM +L A S GL + +++ + + +S T +
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN--VSDSFVSTAL 458
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+D R + EA+ L + F D W A++
Sbjct: 459 IDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 39/238 (16%)
Query: 279 FTWTAMVSGYVQNGKVDEARMI-FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
F A+ S + GK AR++ F+ PE+ + N +I+ Y + + AR +F+ M
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPD 102
Query: 338 KNVASWNTMITGYAQSGE-----ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+++ SWN+++ YAQS E I A LF R+ + D +
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVV-------------------- 141
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
Y R+ SP +L C + + + HG K+G + FV AL+ +Y
Sbjct: 142 -------YTSRMTLSP---MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYL 191
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
K G V+E FEE+ +DV+ WN M+ Y GF ++A+ L + + G+ P++IT+
Sbjct: 192 KFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 59 WDIRQWNVAITTHMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
+D+ W + M C D +A F+S+P V++ MISG + NG+ + A VF
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAA--------RNLFEMMPKRDVVSWNTMLSGYAQNG 168
QM ++ I+ + S A N ++ D +++ YA+ G
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
D A +F R+ N +WN +L Q+G +E LF+
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 27/206 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+ ++ Y+ G + A+ FD +P D V+W MISG + N A ++F M V+
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
++ A+ A ++ GR A L + N
Sbjct: 616 PDEFTIATLAKASSCLTA----------------------LEQGRQIHANALKLNCTNDP 653
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
V SL+ + K + DA +F R+ + + +WN M+ G AQ+ E +LF++
Sbjct: 654 FVG-TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 276 ----KDVFTWTAMVSGYVQNGKVDEA 297
D T+ ++S +G V EA
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEA 738
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/665 (37%), Positives = 382/665 (57%), Gaps = 41/665 (6%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----N 184
++ Y+R ++ A +F+ MP+RDV +WN MLSG +N A A + RM+ + +
Sbjct: 108 LVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGD 167
Query: 185 EISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
++ + +L V G A ++ + + E+ N+L+ + K L +A W+F
Sbjct: 168 AVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFG 227
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDE 296
M +RD V+WN++I+ Q +A A LF E DV T ++ S Q G
Sbjct: 228 GMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCG---- 283
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
D + K+ + YV+ + D+ ++ + N M+ YA+ +I
Sbjct: 284 -----DELGAKS-------VHCYVRRRGWDVG----------DIIAGNAMVDMYAKMSKI 321
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY-GERLNRSPFTSVLST 415
A+ +FD +P D +SW +I GY Q+G + +++R++ +M + G + + F SVL
Sbjct: 322 DAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPA 381
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
+ L L+ G ++H +K G +V L+ +Y KCG + EA FE + + W
Sbjct: 382 YSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPW 441
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N +IAG HG G AL LF M+ IKPD +T V +L+ACSH GLV++G +F M
Sbjct: 442 NAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQT 501
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
YG++P +KHYTCMVD+LGRAG+LDEA +++MP +PD+A WGALLGACR++G E+ +
Sbjct: 502 VYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGK 561
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
A++ +FE++PEN G YVL+SN+YA G+W V VR +R + ++K G+S +EV+ V
Sbjct: 562 VASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSV 621
Query: 656 HTFSVGDTL--HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
F G HP+ + I L +L K+K G+V VL DV E+EKE +L HSE+
Sbjct: 622 SVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSER 681
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+A+GI++ P G P+ + KNLRVC DCH+A K+ISKI R II+RD NRFHHF G CS
Sbjct: 682 LAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCS 741
Query: 774 CGDYW 778
CGD+W
Sbjct: 742 CGDFW 746
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 186/402 (46%), Gaps = 55/402 (13%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+VF ++V Y++ G+V EA +FD MPE++ +WNAM++G + R A L M
Sbjct: 101 NVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMV 160
Query: 337 CKNVAS---------------------------------------WNTMITGYAQSGEIT 357
+ VA N +I Y + G +T
Sbjct: 161 GEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLT 220
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG---ERLNRSPFTSVLS 414
A +F M D ++W +II+ Q G ++ LF M G + L S ++
Sbjct: 221 EAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVA 280
Query: 415 TCANLASLELG-KQLHGQLVKVGFEAGCFV-GNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C + ELG K +H + + G++ G + GNA++ MY K ++ A F+ + D+DV
Sbjct: 281 QCGD----ELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDV 336
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
+SWNT+I GY ++G +A+ ++ M G+KP T V +L A S+ G +++G +
Sbjct: 337 VSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMR-MH 395
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
+++ G+ + TC++DL + G+L EA L ++MP W A++ ++G
Sbjct: 396 ALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRR-STGPWNAIIAGLGVHGH- 453
Query: 592 ELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWGDVSKVR 632
KA + +M+ E +V +L AA G V + R
Sbjct: 454 --GAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGR 493
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 165/342 (48%), Gaps = 34/342 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS----VSYNAMISGYLLNGQLDPARQVF 115
D+ WN I+ + + G +A+ +F+ M ++ ++ S G A+ V
Sbjct: 233 DLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVH 292
Query: 116 DQMPQR-----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ +R D+++ N M+ Y + + AA+ +F+ +P RDVVSWNT+++GY QNG A
Sbjct: 293 CYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLA 352
Query: 171 DAARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNS 221
+ A RI++ M L+ + ++ +L AY G +++ + ++ N +V
Sbjct: 353 NEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTC 412
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKD 277
L+ + K +L +A ++F+ MP R WN +I G + + A+A LF +E D
Sbjct: 413 LIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPD 472
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELF 332
T+ ++++ G VD+ R FD M + + M+ + ++D A E
Sbjct: 473 HVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFI 532
Query: 333 EAMTCK-NVASWNTM-----ITGYAQSGEITHARNLFDRMPQ 368
++M K + A W + I G + G++ ++NLF+ P+
Sbjct: 533 QSMPIKPDSAVWGALLGACRIHGNVEMGKVA-SQNLFELDPE 573
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 153/394 (38%), Gaps = 123/394 (31%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+++ YL G++ A +VFD+MP+RD+ +WN M+SG RN + A L M V
Sbjct: 106 GSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVA 165
Query: 156 S---------------------------------------WNTMLSGYAQNGYADAARRI 176
N ++ Y + G A +
Sbjct: 166 GDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWV 225
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-------------------------- 210
F M ++ ++WN +++A Q G++ A LF
Sbjct: 226 FGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDE 285
Query: 211 -----------KANWEV---VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ W+V ++ N+++ + K ++ A+ +FD +P RD VSWNT+ITG
Sbjct: 286 LGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITG 345
Query: 257 YAQNNYLAEAQRLFEE-------APVK--------------------------------- 276
Y QN EA R++ + P++
Sbjct: 346 YMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNL 405
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
DV+ T ++ Y + GK+ EA +F+ MP ++T WNA+IAG A LF M
Sbjct: 406 DVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQ 465
Query: 337 CKNV----ASWNTMITGYAQSGEITHARNLFDRM 366
+ + ++ +++ + +G + R+ FD M
Sbjct: 466 QEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLM 499
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 125/285 (43%), Gaps = 29/285 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-----SYNAMISGYLLNGQLDPAR 112
D D+ WN IT +M+NG + A+ ++N M + ++ +++ Y G L
Sbjct: 333 DRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGM 392
Query: 113 QV----FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
++ D+ +I Y + L A LFE MP+R WN +++G +G
Sbjct: 393 RMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHG 452
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVS----W 219
+ A +F +M ++ + +++ LLAA G +++ F+ + + +V +
Sbjct: 453 HGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHY 512
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTM-----ITGYAQNNYLAEAQRLFEEA 273
++ + +L +A MP++ D W + I G + +A +Q LFE
Sbjct: 513 TCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVA-SQNLFELD 571
Query: 274 PVKDVFTWTAMVSGYVQNGK---VDEARMIFDAMPEKNTVSWNAM 315
P ++V + M + Y + GK VD R + + T W++M
Sbjct: 572 P-ENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSM 615
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/637 (39%), Positives = 360/637 (56%), Gaps = 78/637 (12%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------- 272
N+L+ +++ RL +A+ +FD + + SWN MI GY ++ + +A RLF E
Sbjct: 67 NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126
Query: 273 --------------------------APVK------DVFTWTAMVSGYVQNGKVDEARMI 300
A ++ DV TA++ Y + G ++EAR I
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKR--------MDMARELFEAMTCKNVASWNT------- 345
FD + + +SW MI Y Q+ + M +E F+ V+ N
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246
Query: 346 ------------------------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
++ YA+SG I AR +FDRM D +SW +I +
Sbjct: 247 KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF 306
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
A+ G ++ LF++M+ G + + F S+L+ CA+ +LE K++H + G E
Sbjct: 307 AEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDV 366
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
VG AL+ MY K GS+++A F+ + ++V+SWN MI+G A+HG G+DAL +F M
Sbjct: 367 RVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAH 426
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G+KPD +T V +LSACSH GLV++G + +M + YG+ P+ H CMVDLLGRAGRL E
Sbjct: 427 GVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLME 486
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A+ + NM +PD ATWGALLG+CR YG EL E A+ +++P+NA YVLLSN+YA
Sbjct: 487 AKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAE 546
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
+G+W VS VR MR+RG++K G SW+EV NK+H F V D+ HPE I +++ K
Sbjct: 547 AGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEK 606
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
+K +G++ T+LVL + ++KE + HSEKLA+ YG++ P G PIRV KNLRVC DC
Sbjct: 607 IKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDC 666
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H A K ISK+ GR II+RD NRFHHF G CSCGDYW
Sbjct: 667 HGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 129/539 (23%), Positives = 208/539 (38%), Gaps = 152/539 (28%)
Query: 23 INRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALH 82
+NRLQ T+ + + LKR L K K D I+ + H+ N + LH
Sbjct: 17 MNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKS-RMEQNAHVMN----NLLH 71
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
V Y+ G+L AR VFD + ++ SWN MI+GYV +K A
Sbjct: 72 V------------------YIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDA 113
Query: 143 RNLFEMMP---------------------------------------KRDVVSWNTMLSG 163
LF M + DV +L
Sbjct: 114 MRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRM 173
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--------------- 208
Y + G + ARRIFD ++ + ISW ++ AY Q+G +EA L
Sbjct: 174 YGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITY 233
Query: 209 ---------ESKANW---------------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
E W +V +L+ + K + DA+ +FDRM V
Sbjct: 234 VSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV 293
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---------------------------- 276
RD VSWN MI +A++ EA LF + +
Sbjct: 294 RDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKI 353
Query: 277 -----------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
DV TA+V Y ++G +D+AR++FD M +N VSWNAMI+G Q
Sbjct: 354 HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLG 413
Query: 326 DMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQ-----HDCISWAA 376
A E+F MT V ++ +++ + +G + R+ + M Q D
Sbjct: 414 QDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNC 473
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++ ++G ++ +LFI+ + + + ++L +C ++ELG+ + + +K+
Sbjct: 474 MVDLLGRAGRLMEA-KLFID--NMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKL 529
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 31/286 (10%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
A++ Y +G +D AR VFD+M RD+VSWNVMI + + A +LF M K
Sbjct: 269 TALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCK 328
Query: 152 RDVVSWNTMLSGYAQNGYADAARRI----FDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
D + + ++L+ A G + ++I D LE + L+ Y ++G I++A ++
Sbjct: 329 PDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVV 388
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYA----- 258
F+ VVSWN+++ G + DA +F RM D V++ +++ +
Sbjct: 389 FDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLV 448
Query: 259 ---QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNA 314
++ YLA Q ++ P DV MV + G++ EA++ D M + + +W A
Sbjct: 449 DEGRSQYLAMTQ-VYGIEP--DVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGA 505
Query: 315 MIA-----GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE 355
++ G V+ + +A+E + + KN A++ + YA++G+
Sbjct: 506 LLGSCRTYGNVELGEL-VAKERLK-LDPKNAATYVLLSNIYAEAGK 549
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 124/304 (40%), Gaps = 56/304 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ D+R + + ++G D A VF+ M R VS+N MI + +G+ A +F Q
Sbjct: 262 ELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQ 321
Query: 118 MP---------------------------------------QRDLVSWNVMISGYVRNKS 138
M + D+ ++ Y ++ S
Sbjct: 322 MQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGS 381
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ AR +F+ M R+VVSWN M+SG AQ+G A +F RM ++ + +++ +L+A
Sbjct: 382 IDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSA 441
Query: 195 -----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
V GR + M +V N ++ + RL +AK D M V DE
Sbjct: 442 CSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEA 501
Query: 249 SWNTMIT-----GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+W ++ G + L +RL + K+ T+ + + Y + GK D +
Sbjct: 502 TWGALLGSCRTYGNVELGELVAKERL--KLDPKNAATYVLLSNIYAEAGKWDMVSWVRTM 559
Query: 304 MPEK 307
M E+
Sbjct: 560 MRER 563
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/521 (43%), Positives = 329/521 (63%), Gaps = 1/521 (0%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N++I YA L A++LF +DV +W AM+ GYV+ G++ RM+FD M ++ +
Sbjct: 39 NSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVI 98
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
SWN +I GY ++D A+ LF+ M +N+ SWN+M++G+ + G + A LF MP D
Sbjct: 99 SWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRD 158
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+SW +++A YAQ G ++L LF +M+ G + + S+LS CA+L +L+ G LH
Sbjct: 159 VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHT 218
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+ E VG AL+ MY KCG + A F + KDV++WNT+IAG A HG K+
Sbjct: 219 YINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKE 278
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
A LF+ MK ++P+DIT V +LSACSH G+V++G + M+ YG+ P +HY C++
Sbjct: 279 AQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVI 338
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLL RAG L+EA L+ MP EP+ + GALLG CR++G EL E + + ++P ++G
Sbjct: 339 DLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSG 398
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
Y+LLSN+YAA+ +W D KVR M+ G+ KV G S +E++ VH F GD HPE ++
Sbjct: 399 RYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNK 458
Query: 671 IYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
IY L E+ +LK G+ T VL D+ EE+KEH L HSEKLA+AYG+L + + I
Sbjct: 459 IYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAI 518
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
R++KNLRVC DCH+ K ISK+ GR II+RD NRFHHF G
Sbjct: 519 RIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDG 559
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 185/371 (49%), Gaps = 20/371 (5%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
HV S S N++I Y L A+Q+F RD+VSWN MI GYV+ +
Sbjct: 25 HVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGH 84
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
R +F+ M RDV+SWNT+++GYA G D A+R+FD M E+N +SWN +L+ +V+ G +
Sbjct: 85 TRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNV 144
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGY 257
EEA LF +VVSWNS++ + + + +A +FD+M E + ++++
Sbjct: 145 EEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSAC 204
Query: 258 AQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
A L + L + + TA+V Y + GK+ A +F+AM K+ ++WN
Sbjct: 205 AHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWN 264
Query: 314 AMIAGYVQTKRMDMARELF----EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
+IAG + A++LF EA N ++ M++ + +G + + L D M
Sbjct: 265 TIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSS 324
Query: 370 DCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
I + +I A++G E+++ L M N S ++L C + EL
Sbjct: 325 YGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPM---EPNPSALGALLGGCRIHGNFEL 381
Query: 425 GKQLHGQLVKV 435
G+ + +L+ +
Sbjct: 382 GEMVGKRLINL 392
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 177/336 (52%), Gaps = 26/336 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ WN I +++ G VF+ M R +S+N +I+GY + G++D A+++FD+
Sbjct: 63 DRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDE 122
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+R+LVSWN M+SG+V+ ++ A LF MP RDVVSWN+ML+ YAQ G + A +F
Sbjct: 123 MPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 182
Query: 178 DRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG-----FVK 228
D+M ++ E + LL+A G +++ L + N + NS++G + K
Sbjct: 183 DQMRAVGVKPTEATVVSLLSACAHLGALDKGLHL-HTYINDNRIEVNSIVGTALVDMYAK 241
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAM 284
++ A +F+ M +D ++WNT+I G A + ++ EAQ+LF+E V T+ AM
Sbjct: 242 CGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAM 301
Query: 285 VSGYVQNGKVDEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK- 338
+S G VDE + + D M E ++ +I + ++ A EL M +
Sbjct: 302 LSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEP 361
Query: 339 NVASWNTM-----ITGYAQSGEITHARNLFDRMPQH 369
N ++ + I G + GE+ R L + P H
Sbjct: 362 NPSALGALLGGCRIHGNFELGEMVGKR-LINLQPCH 396
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 154/306 (50%), Gaps = 17/306 (5%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+A +F+ R VS+NAMI GY+ G++ R VFD+M RD++SWN +I+GY
Sbjct: 53 AAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGK 112
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ A+ LF+ MP+R++VSWN+MLSG+ + G + A +F M ++ +SWN +LA Y Q
Sbjct: 113 IDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQC 172
Query: 199 GRIEEACMLFES-------KANWEVVSWNSLMGGF-VKQKRLGDAKWIFDRMPVRDEVSW 250
G+ EA LF+ VVS S K L +I D + +
Sbjct: 173 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 232
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----E 306
++ YA+ ++ A ++F KDV W +++G +G V EA+ +F M E
Sbjct: 233 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVE 292
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARN 361
N +++ AM++ +D ++L + M+ V ++ +I A++G + A
Sbjct: 293 PNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAME 352
Query: 362 LFDRMP 367
L MP
Sbjct: 353 LIGTMP 358
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
PF V+ C + G +H +VK GFE ++ N+L+ +Y + A F
Sbjct: 4 PF--VIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
D+DV+SWN MI GY + G M+F+ M + D I+ I++ + G +++
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEAK 117
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
F M V NS M+ + G ++EA L MP D +W ++L
Sbjct: 118 RLFDEMPERNLVSWNS-----MLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSMLACYAQ 171
Query: 588 YGK 590
GK
Sbjct: 172 CGK 174
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 273/751 (36%), Positives = 413/751 (54%), Gaps = 72/751 (9%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISGYVRN----KSLSAARN 144
R +V N++++ Y G + AR VFD M RD+VSW M S RN +SL
Sbjct: 82 RDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGE 141
Query: 145 LFE--MMPK-----------------------------------RDVVSWNTMLSGYAQN 167
+ E ++P D+ + ++ A+N
Sbjct: 142 MLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARN 201
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLM 223
G +AR++FD ++EK + W L++ YVQ EEA +F E + + +S++
Sbjct: 202 GDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMI 261
Query: 224 GGFVK--QKRLG-DAKWIFDRMPVRDEVSWNT-MITGYAQNNY---LAEAQRLFEEAPVK 276
+ RLG + RM + + ++ YA++N + A ++FE
Sbjct: 262 SACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKN 321
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIF-----DAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
DV +WTA++SGYVQ+G + M+ + + N +++++++ D R++
Sbjct: 322 DVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQV 381
Query: 332 FEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ N A+ N +++ YA+SG + AR +F+++ + IS I G
Sbjct: 382 HAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS--CITEGRDAP--- 436
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
L + R ++ S F S++S A++ L G+QLH +K GF + FV N+L
Sbjct: 437 -----LDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSL 491
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY +CG +E+A +F E+ D++VISW +MI+G A+HG+ + AL LF M G+KP+D
Sbjct: 492 VSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPND 551
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T + +LSACSH GLV +G EYF SM RD+G+IP +HY CMVDLL R+G + EA +
Sbjct: 552 VTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFIN 611
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP + DA W LLGACR + E+ E AA+ + E+EP + YVLLSNLYA +G W +
Sbjct: 612 EMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDE 671
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
V+++R MRD + K TG SW+EV+N H F GDT HP IY L+ L ++K G+
Sbjct: 672 VARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGY 731
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V T +VLHD+ +E KE L HSEK+AVA+G+++ A +PIR+ KNLRVC DCH+AIK+
Sbjct: 732 VPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKY 791
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+SK R IILRD+NRFH G CSCG+YW
Sbjct: 792 MSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 192/462 (41%), Gaps = 96/462 (20%)
Query: 57 GDW--DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
G W DI + I RNG SA VF+ + ++ V + +IS Y+ + A ++
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEI 241
Query: 115 F----DQMPQRDLVSWNVMIS-----GYVR------------------------------ 135
F + + D + + MIS G VR
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK 301
Query: 136 ---NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD-AARRIFDRMLEK----NEIS 187
+++ A +FE M K DV+SW ++SGY Q+G + +F ML + N I+
Sbjct: 302 SNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHIT 361
Query: 188 WNGLLAAYV-----QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
++ +L A +GR A ++ ++A V N+L+ + + + +A+ +F+++
Sbjct: 362 YSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVG-NALVSMYAESGCMEEARRVFNQL 420
Query: 243 PVRDEVS-------------------------WNTMITGYAQNNYLAEAQRL----FEEA 273
R +S + ++I+ A L + Q+L +
Sbjct: 421 YERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAG 480
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
D F ++VS Y + G +++A F+ + ++N +SW +MI+G + + A LF
Sbjct: 481 FGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFH 540
Query: 334 AMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQ-HDCIS----WAAIIAGYAQS 384
M V ++ +++ + G + + F M + H I +A ++ A+S
Sbjct: 541 DMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARS 600
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
G +++L EM + L + ++L C + ++E+G+
Sbjct: 601 GLVKEALEFINEMPLKADAL---VWKTLLGACRSHDNIEVGE 639
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 422 LELGKQLHGQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD-KDVISWNTMI 479
L LG+ LH +L++ + V N+LL +Y +CG+V A + F+ + +D++SW M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
+ AR+G +++L+L M G+ P+ T+ + AC L + G+
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 540 IPNSKHY-TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ ++D+L R G L A+ + + E W L+ Y + E AE+A
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLISR---YVQGECAEEAV 239
Query: 599 EVIFE-----MEPENAGMYVLLS 616
E+ + EP+ M ++S
Sbjct: 240 EIFLDFLEDGFEPDRYTMSSMIS 262
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 51/326 (15%)
Query: 26 LQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFN 85
L++ AN + + S + + H+ ++ G N ++ + +GC + A VFN
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVG-------NALVSMYAESGCMEEARRVFN 418
Query: 86 SMPRRSSVS-------------------------YNAMISGYLLNGQLDPARQVFDQMPQ 120
+ RS +S + ++IS G L +Q+ +
Sbjct: 419 QLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLK 478
Query: 121 ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
D N ++S Y R L A F + R+V+SW +M+SG A++GYA+ A +
Sbjct: 479 AGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSL 538
Query: 177 FDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKAN-----WEVVSWNSLMGGFV 227
F M+ + N++++ +L+A G + E F S + + ++
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLA 598
Query: 228 KQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYLA----EAQRLFEEAPVKDVFTWT 282
+ + +A + MP++ D + W T++ ++ + A+ + E P +D +
Sbjct: 599 RSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEP-RDPAPYV 657
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKN 308
+ + Y G DE I AM + N
Sbjct: 658 LLSNLYADAGLWDEVARIRSAMRDNN 683
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 269/816 (32%), Positives = 426/816 (52%), Gaps = 102/816 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI +N + RN ALH+F + S + G L+ L +FDQ+
Sbjct: 68 DISHYNRLLFDFSRNNHDREALHLFKDLH-----SSGLGVDGLTLSCALKVCGVLFDQVV 122
Query: 120 QR-------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
R D+ ++ Y++ + R +F+ M ++VVSW ++LSGYA+
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182
Query: 167 NGYADAARRIFDRM---------------------------------------LEKNEIS 187
NG D + ++M E
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV--- 244
N L+ Y+++ + +A +F+S + V+WN ++GG+ + +F RM +
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302
Query: 245 ----------------RDEVSWNTMI-TGYAQNNY-------------------LAEAQR 268
+ E+++ + G +N Y + EA +
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362
Query: 269 LFEEA-PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTK 323
LF A +V TWTAM+ G+VQN +A +F M + N +++ ++AG +
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL 422
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
+ ++ +A K + ++ Y ++G + + +F +P D ++W+A++ G AQ
Sbjct: 423 LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQ 482
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN-LASLELGKQLHGQLVKVGFEAGCF 442
+ SE ++ +FI++ + G + N F+SV++ C++ A++E GKQ+H VK G
Sbjct: 483 TRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALC 542
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
V +ALL MY K G++E A F ++D++SWN+MI GY +HG K AL +F+ M+ G
Sbjct: 543 VSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQG 602
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+ DD+T +G+L+AC+H GLVE+G +YF M +DY + +HY+CMVDL RAG D+A
Sbjct: 603 LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKA 662
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+++ MPF W LL ACR++ EL + AAE + ++P +A YVLLSN++A +
Sbjct: 663 MDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVA 722
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
G W + + VR M +R VKK G SW+E++N++ +F GD HP D +YA LEEL KL
Sbjct: 723 GNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKL 782
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
K G+ T V HDV EE KE +L HSE+LA+AYG++++P G PI++ KNLR+C DCH
Sbjct: 783 KDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCH 842
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
N I+ IS I R +I+RD+NRFHHF GG CSCG YW
Sbjct: 843 NVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 135/544 (24%), Positives = 240/544 (44%), Gaps = 74/544 (13%)
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
NG S++H Y+ + L + A Q+FD+ P +D+ +N ++ +
Sbjct: 20 NGRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDF 79
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
RN A +LF +D+ S + G + +FD+++
Sbjct: 80 SRNNHDREALHLF-----KDLHSSGLGVDGLTLSCALKVCGVLFDQVV------------ 122
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
GR + C +S +V SL+ ++K + D + IFD M +++ VSW ++
Sbjct: 123 -----GR-QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKN- 308
++GYA+N E L + ++ V FT+ A V G + + + E + AM KN
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTF-ATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 309 ----TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
T NA+I Y++++ + A +F++M ++ +WN MI GY
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGY-------------- 281
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
AAI G+ + ++F M+ G +L+R+ F + L C+ L
Sbjct: 282 ----------AAI-------GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNF 324
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYA 483
KQLH +VK G+E + AL+V Y KC SV+EA+ F +V++W MI G+
Sbjct: 325 TKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFV 384
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
++ K A+ LF M G++P+ T +L+ + L + + + Y +P+
Sbjct: 385 QNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAY---YEKVPSV 441
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
T ++D + G + E+ + ++P D W A+L +T +EKA EV +
Sbjct: 442 A--TALLDAYVKTGNVVESARVFYSIP-AKDIVAWSAMLTG---LAQTRDSEKAMEVFIQ 495
Query: 604 MEPE 607
+ E
Sbjct: 496 LVKE 499
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 289/825 (35%), Positives = 441/825 (53%), Gaps = 113/825 (13%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSS--------VSYNAMISGYLLNGQLDPARQVF 115
WN I+ + R G SA +F+SM R ++ ++ ++++ + +D +
Sbjct: 212 WNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVT--VACSLVDCGLTLL 269
Query: 116 DQMPQR--------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+QM R DL + ++SG+ R + +A+ +FE M R+ V+ N ++ G A+
Sbjct: 270 EQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQ 329
Query: 168 GYADAARRIFDRM---LEKNEISWNGLLAAYVQNGRIEE---------ACMLFESKANWE 215
+ A +IF M +E N S+ LL+A+ + ++E A ++ + +
Sbjct: 330 HQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVW 389
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--- 272
++ N+L+ + K + +A+ IF MP +D VSWN++I+G N EA F
Sbjct: 390 ILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRR 449
Query: 273 ---APVK---------------------------------DVFTWTAMVSGYVQNGKVDE 296
P K DV A+++ Y + ++E
Sbjct: 450 NGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEE 509
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKR--MDMARELFEAM---------TCKNV----- 340
+ +F MPE + VSWN+ I ++ + + E M T N+
Sbjct: 510 YQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVS 569
Query: 341 ------------------------ASWNTMITGYAQSGEITHARNLFDRMPQH-DCISWA 375
A NT++ Y + ++ +F RM + D +SW
Sbjct: 570 SLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWN 629
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+I+GY +G ++ L M + G+RL+ +VLS CA++A+LE G ++H ++
Sbjct: 630 AMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRA 689
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
EA VG+AL+ MY KCG ++ A FE + +++ SWN+MI+GYARHG G AL LF
Sbjct: 690 CLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLF 749
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
MK G PD +T VG+LSACSH GLV++G E+F SM Y + P +H++CMVDLLGR
Sbjct: 750 TQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGR 809
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGA-CRLYGK-TELAEKAAEVIFEMEPENAGMYV 613
AG + + + +K MP P+A W +LGA CR + TEL +AA+++ E+EP NA YV
Sbjct: 810 AGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYV 869
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LLSN++AA G+W DV + RL MR+ VKK G SW+ +++ VH F GD HPEK++IY
Sbjct: 870 LLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYD 929
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L+E+ K++ G+V TK L+D+ E KE +L YHSEKLA+A+ +L+ + PIR++K
Sbjct: 930 KLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELPIRIIK 988
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLRVC DCH A K+IS IV R IILRD+NRFHHF GG CSC DYW
Sbjct: 989 NLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 172/694 (24%), Positives = 295/694 (42%), Gaps = 161/694 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + +R G SA +F+ MP+++ VS++ ++SGY NG D A +F
Sbjct: 73 DVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLF---- 128
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPK---------------RDVVSWNTMLSGY 164
R ++S ++ + Y +L A + L M K D+V N ++S Y
Sbjct: 129 -RGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMY 187
Query: 165 AQ-NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK------------ 211
+ + D ARR+F+ + K SWN +++ Y + G A LF S
Sbjct: 188 SHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPN 247
Query: 212 --------------------------ANWEVVSW-------NSLMGGFVKQKRLGDAKWI 238
A E S+ ++L+ GF + + AK I
Sbjct: 248 EYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMI 307
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------------APVKDVFT------ 280
F++M R+ V+ N ++ G A+ + EA ++F+E A + FT
Sbjct: 308 FEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLK 367
Query: 281 ---------------------W----TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
W A+V+ Y + +D AR IF MP K+TVSWN++
Sbjct: 368 EGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSI 427
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCK-------------------- 338
I+G +R + A F M +C
Sbjct: 428 ISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGL 487
Query: 339 --NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE-DSLRLFI 395
+V+ N ++T YA++ + + +F MP++D +SW + I A S S +++ F+
Sbjct: 488 DLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFL 547
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM + G + NR F ++LS ++L+ LELG+Q+H ++K + N LL Y KC
Sbjct: 548 EMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCE 607
Query: 456 SVEEAYHAFEEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
+E+ F + + +D +SWN MI+GY +G A+ L M G + DD T+ +L
Sbjct: 608 QMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVL 667
Query: 515 SACSHTGLVEKGTEYFYSMNR---DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
SAC+ +E+G E R + V+ S +VD+ + G++D A + MP
Sbjct: 668 SACASVATLERGMEVHACAIRACLEAEVVVGSA----LVDMYAKCGKIDYASRFFELMPV 723
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ +W +++ Y + KA ++ +M+
Sbjct: 724 R-NIYSWNSMISG---YARHGHGGKALKLFTQMK 753
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 138/576 (23%), Positives = 257/576 (44%), Gaps = 113/576 (19%)
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
Q++ D+ N +++ +VR +L +A+ LF+ MP++++VSW+ ++SGYAQNG D
Sbjct: 64 QIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDE 123
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC----------------MLFESKANWEV 216
A +F ++ GLL + G AC ++ +S ++
Sbjct: 124 ACMLFRGIISA------GLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDM 177
Query: 217 VSWNSLMGGFVK-QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----- 270
V N LM + + DA+ +F+ + ++ SWN++I+ Y + A +LF
Sbjct: 178 VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237
Query: 271 ----------------------------------------EEAPVKDVFTWTAMVSGYVQ 290
+ + VKD++ +A+VSG+ +
Sbjct: 238 EATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFAR 297
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---TCKNVASW---- 343
G +D A+MIF+ M ++N V+ N ++ G + + + A ++F+ M N +S+
Sbjct: 298 YGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLL 357
Query: 344 ------------------------------------NTMITGYAQSGEITHARNLFDRMP 367
N ++ YA+ I +AR++F MP
Sbjct: 358 SAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMP 417
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
D +SW +II+G + E+++ F M+R G ++ S LS+CA+L + LG+Q
Sbjct: 418 SKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQ 477
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA-RHG 486
+HG+ +K G + V NALL +Y + +EE F + + D +SWN+ I A
Sbjct: 478 IHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEA 537
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
A+ F M G KP+ +T + ILSA S L+E G + +++ + V ++
Sbjct: 538 SVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQ-IHALILKHSVADDNAIE 596
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
++ G+ ++++ + + M D +W A++
Sbjct: 597 NTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMI 632
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 21/286 (7%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
NT++ + ++G + A+ LFD MPQ + +SW+ +++GYAQ+G +++ LF + G
Sbjct: 78 NTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLL 137
Query: 404 LNRSPFTSVLSTCANLAS--LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC-GSVEEA 460
N S L C L L+LG ++HG + K + + + N L+ MY C S+++A
Sbjct: 138 PNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDA 197
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK----TVGIKPDDITMVGILS- 515
FEEI K SWN++I+ Y R G A LF SM+ + +P++ T +++
Sbjct: 198 RRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTV 257
Query: 516 ACSHTGLVEKGTEYFYSM---NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
ACS LV+ G M + + + +V R G +D A+ + + M
Sbjct: 258 ACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDR 314
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEME---PENAGMYVLL 615
G ++G R + E+AA++ EM+ NA Y +L
Sbjct: 315 NAVTMNGLMVGLARQHQ----GEEAAKIFKEMKDLVEINASSYAVL 356
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 123/303 (40%), Gaps = 55/303 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY--------------- 102
D D+ N +T + C + VF MP VS+N+ I
Sbjct: 488 DLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFL 547
Query: 103 -LLNGQLDPARQVFDQMPQR------------------------DLVSWNVMISGYVRNK 137
++ P R F + D N +++ Y + +
Sbjct: 548 EMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCE 607
Query: 138 SLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLL 192
+ +F M +RD VSWN M+SGY NG A + M++K ++ + +L
Sbjct: 608 QMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVL 667
Query: 193 AAYVQNGRIE-----EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+A +E AC + + EVV ++L+ + K ++ A F+ MPVR+
Sbjct: 668 SACASVATLERGMEVHACAI-RACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNI 726
Query: 248 VSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
SWN+MI+GYA++ + +A +LF + + D T+ ++S G VDE F +
Sbjct: 727 YSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKS 786
Query: 304 MPE 306
M E
Sbjct: 787 MGE 789
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
++E QLH Q+ K G + F N L+ ++ + G++ A F+E+ K+++SW+ +++
Sbjct: 54 TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG--LVEKGTEYFYSMNRDYG 538
GYA++G +A MLF + + G+ P+ + L AC G +++ G E +G
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEI-------HG 166
Query: 539 VIPNSKHYTCMV--DLLGR-----AGRLDEAQNLMKNMPFEPDAATWGALLGA-CR 586
+I S + + MV ++L + +D+A+ + + + + +A+W +++ CR
Sbjct: 167 LISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKT-SASWNSIISVYCR 221
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 269/816 (32%), Positives = 427/816 (52%), Gaps = 102/816 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI +N + RN ALH+F + S + G L+ L +FDQ+
Sbjct: 68 DISHYNRLLFDFSRNNHDREALHLFKDLH-----SSGLGVDGLTLSCALKVCGVLFDQVV 122
Query: 120 QR-------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
R D+ ++ Y++ + R +F+ M ++VVSW ++LSGYA+
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182
Query: 167 NGYADAARRIFDRM---------------------------------------LEKNEIS 187
NG D + ++M E
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV--- 244
N L+ Y+++ + +A +F+S + V+WN ++GG+ + +F RM +
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302
Query: 245 ----------------RDEVSWNTMI-TGYAQNNY-------------------LAEAQR 268
+ E+++ + G +N Y + EA +
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362
Query: 269 LFEEA-PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTK 323
LF A +V TWTAM+ G+VQN ++A +F M + N +++ ++AG +
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL 422
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
+ ++ +A K + ++ Y ++G + + +F +P D ++W+A++ G AQ
Sbjct: 423 LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQ 482
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN-LASLELGKQLHGQLVKVGFEAGCF 442
+ SE ++ +FI++ + G + N F+SV++ C++ A++E GKQ+H VK G
Sbjct: 483 TRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALC 542
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
V +ALL MY K G++E A F ++D++SWN+MI GY +HG K AL +F+ M+ G
Sbjct: 543 VSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQG 602
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+ DD+T +G+L+AC+H GLVE+G +YF M +DY + +HY+CMVDL RAG D+A
Sbjct: 603 LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKA 662
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+++ MPF W LL ACR++ EL + AAE + ++P +A YVLLSN++A +
Sbjct: 663 MDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVA 722
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
G W + + VR M +R VKK G SW+E++N++ +F GD HP D +YA LEEL KL
Sbjct: 723 GNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKL 782
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
K G+ T V HDV EE KE +L HSE+LA+AYG++++P G PI++ KNLR+C DCH
Sbjct: 783 KDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCH 842
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
N I+ IS I R +I+RD+NRFHHF GG CSCG YW
Sbjct: 843 NVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 240/544 (44%), Gaps = 74/544 (13%)
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
NG S++H Y+ + L + A Q+FD+ P +D+ +N ++ +
Sbjct: 20 NGRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDF 79
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
RN A +LF +D+ S + G + +FD+++
Sbjct: 80 SRNNHDREALHLF-----KDLHSSGLGVDGLTLSCALKVCGVLFDQVV------------ 122
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
GR + C +S +V SL+ ++K + D + IFD M +++ VSW ++
Sbjct: 123 -----GR-QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKN- 308
++GYA+N E L + ++ V FT+ A V G + + + E + AM KN
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTF-ATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 309 ----TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
T NA+I Y++++ + A +F++M ++ +WN MI GY
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGY-------------- 281
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
AAI G+ + ++F M+ G +L+R+ F + L C+ L
Sbjct: 282 ----------AAI-------GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNF 324
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYA 483
KQLH +VK G+E + AL+V Y KC SV+EA+ F +V++W MI G+
Sbjct: 325 TKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFV 384
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
++ + A+ LF M G++P+ T +L+ + L + + + Y +P+
Sbjct: 385 QNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAY---YEKVPSV 441
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
T ++D + G + E+ + ++P D W A+L +T +EKA EV +
Sbjct: 442 A--TALLDAYVKTGNVVESARVFYSIP-AKDIVAWSAMLTG---LAQTRDSEKAMEVFIQ 495
Query: 604 MEPE 607
+ E
Sbjct: 496 LVKE 499
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 273/831 (32%), Positives = 434/831 (52%), Gaps = 99/831 (11%)
Query: 45 LNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNA-----MI 99
L S SR + D ++ W + + G + + ++ SM R V N +I
Sbjct: 210 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSM-RGEGVECNENSMSLVI 268
Query: 100 SGYLLNGQLDPARQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
S L RQ+ Q+ + L S N +IS + ++ A +F + +RD +
Sbjct: 269 SSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTI 328
Query: 156 SWNTMLSGYAQNGYADAARRIFDRML----EKNEIS---------------W-------- 188
SWN++++ YAQNG+ + + RIF+ M E N + W
Sbjct: 329 SWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLV 388
Query: 189 ------------NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
N LL Y GR EEA ++F+ +++SWNSLM FV R DA
Sbjct: 389 VKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDAL 448
Query: 237 WIFDRMPVR-----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF----TWTAMVSG 287
I M +R + V++ + + + + + L V +F A+VS
Sbjct: 449 GILCSM-IRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSM 507
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----- 342
Y + G + +R + MP ++ V+WNA+I GY + + D A F+ + + V++
Sbjct: 508 YGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITV 567
Query: 343 -----------------------------------WNTMITGYAQSGEITHARNLFDRMP 367
N++IT YA+ G+++ +++LF+ +
Sbjct: 568 VSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 627
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
I+W AI+A A G+ E+ L+L +M+ +G L++ F+ LS A LA LE G+Q
Sbjct: 628 NRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQ 687
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
LHG VK+GFE CF+ NA MY KCG + E V++ + SWN +I+ RHG+
Sbjct: 688 LHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 747
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
++ F M +GIKP +T V +L+ACSH GLV++G Y+ + +D+G+ P +H
Sbjct: 748 FEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCI 807
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
C++DLLGR+GRL EA+ + MP +P+ W +LL +C+++ + KAAE + ++EPE
Sbjct: 808 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPE 867
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
+ ++VL SN++A +GRW DV VR +M + +KK SW+++++KV +F +GD HP+
Sbjct: 868 DDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 927
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
IYA LE+++ +K+ G+V T L D EE+KEH L HSE+LA+AY ++S P G
Sbjct: 928 TMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 987
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+R+ KNLR+C DCH+ K +S+++GR I+LRD RFHHF G CSC DYW
Sbjct: 988 TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/552 (24%), Positives = 244/552 (44%), Gaps = 107/552 (19%)
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
WN LS + Q G++ R R L + + GL+ V
Sbjct: 56 WNPELSCFDQTGFSQITRETTGRAL--HALCVKGLV--------------------RLSV 93
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE---- 272
+ N+L+ + K R+ A+++FD+MPVR+EVSWNTM++G + E F++
Sbjct: 94 LHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDL 153
Query: 273 ------------------------------------APVKDVFTWTAMVSGYVQNGKVDE 296
+ DV+ TA++ Y G V
Sbjct: 154 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 213
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV---------------- 340
+R +F+ MP++N VSW +++ GY + +++++M + V
Sbjct: 214 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGL 273
Query: 341 -----------------------ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
A N++I+ + G + +A +F+++ + D ISW +I
Sbjct: 274 LKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSI 333
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+A YAQ+G+ E+S R+F M+R+ + +N + +++LS ++ + G+ +HG +VK+GF
Sbjct: 334 VAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGF 393
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
++ V N LL MY G EEA F+++ KD+ISWN+++A + G DAL + S
Sbjct: 394 DSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCS 453
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M G + +T L+AC +KG + + G+ N +V + G+ G
Sbjct: 454 MIRTGKSVNYVTFTSALAACFSPEFFDKG-RILHGLVVVSGLFDNQIIGNALVSMYGKIG 512
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YVLLS 616
+ ++ ++ MP D W AL+G Y + E +KA + E Y+ +
Sbjct: 513 GMSTSRRVLLQMP-RRDVVAWNALIGG---YAENEDPDKALAAFQTLRVEGVSANYITVV 568
Query: 617 NLYAASGRWGDV 628
++ +A GD+
Sbjct: 569 SVLSACLVPGDL 580
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/639 (37%), Positives = 381/639 (59%), Gaps = 24/639 (3%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ +R G +A +F+++P RS V++N++++G AR+ FD MP RD V
Sbjct: 4 NRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAV 63
Query: 125 SWNVMISGYVRNKS---LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
SWN +++ Y + L+AAR LF+ MP+RDVV+WNT+L YA+ G D ARR+FD M
Sbjct: 64 SWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMP 123
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF-D 240
++N SWN ++ + G++ +A +F++ + S ++++ GF K L +A+ +
Sbjct: 124 QRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTK 183
Query: 241 RMPVRDEV----SWNTMITGYAQNNYLAEAQRLFEEAPV--------------KDVFTWT 282
R+ V D ++NT+I Y Q ++A+RLF+ P ++V +W
Sbjct: 184 RLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWN 243
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
+M+ Y++ G V AR +F+ MP+K+ VSWN MI+GY Q M + +LF M + S
Sbjct: 244 SMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVS 303
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN +I G+ Q GE HAR FDRMP+ ISW +I+GY ++G S++LF +M GE
Sbjct: 304 WNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGE 363
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+R F+SVL+ CA++ L LG Q+H QLV+ F + NAL+ MY +CG++ +A
Sbjct: 364 IPDRHTFSSVLAACASIPMLGLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEA 422
Query: 463 AFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+++ KD++SWN +I Y HG AL LF+ M+ + P IT V +LSAC + G
Sbjct: 423 IFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAG 482
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV +G F +M +YG++ +HY +V+L+GR G+LD+A ++ +MP PD + WGA
Sbjct: 483 LVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAF 542
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGAC LA+ AA+ + + P+++ YVL+ NL+A G+WG + VR +M +G+
Sbjct: 543 LGACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIY 602
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
K GYSW++++ K+H F GDT HP I++ LE+ ++
Sbjct: 603 KQPGYSWIDLEGKMHVFISGDTWHPNAQEIFSVLEDWQW 641
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 138/257 (53%), Gaps = 12/257 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN + +++ G SA +FN MP + VS+N MISGY + + ++F +MP
Sbjct: 238 NVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMP 297
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
D VSWN++I G+++ AR F+ MP+R +SWNTM+SGY +NG ++ ++F +
Sbjct: 298 DPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSK 357
Query: 180 MLEKNEI----SWNGLLAAYVQN---GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
MLE EI +++ +LAA G + L E + N+L+ + + L
Sbjct: 358 MLEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVPDTAISNALITMYSRCGAL 417
Query: 233 GDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSG 287
DA+ IF +M +D VSWN +I Y + +A +LF+E V T+ +++S
Sbjct: 418 NDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSA 477
Query: 288 YVQNGKVDEARMIFDAM 304
V G V E RM+FD M
Sbjct: 478 CVNAGLVSEGRMVFDTM 494
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/509 (43%), Positives = 334/509 (65%)
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M ++ +SWN ++ Y +NG +E+ LF VVSWNS++ G ++ +R+ +A F
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
MP R+ SWN MI+G + + + EA RLFEE P ++V ++TAMV GY + G++++AR
Sbjct: 61 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 120
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+F+ MP+KN VSW MI+GYV+ + D A LFE M KN+ + MITGY + G+ A
Sbjct: 121 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKA 180
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+ LFD++P D SW A+I GYAQ+G E++L+L +M + G + + S SVL+ C++L
Sbjct: 181 KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSL 240
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
ASL+ G++ H ++K G+E+ + NAL+ MYCKCGS+ ++ AF +I DV+SWN MI
Sbjct: 241 ASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMI 300
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
A +ARHGF AL F M++ ++PD IT + +LSAC H G V + +F SM Y +
Sbjct: 301 AAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKI 360
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P +H+ C+VD+L R G++++A +++ MPFE D WGALL AC ++ +L E AA+
Sbjct: 361 VPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAK 420
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
I E+EP+N+G YV+LSN+YAA+G WG+V++VR MR++GVKK YSW+E+ NKVH F
Sbjct: 421 KIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFL 480
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
D HPE RI L+ ++ ++ D +
Sbjct: 481 GDDASHPEIHRIRLELKGMKLQMIADDDI 509
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 211/403 (52%), Gaps = 16/403 (3%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN IT + +NGC D + +F MP ++ VS+N+MI+G + + ++D A Q F MP
Sbjct: 5 DTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMP 64
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
QR+ SWN MISG VR + A LFE MP+R+V+S+ M+ GYA+ G + AR +F+
Sbjct: 65 QRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNC 124
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M +KN +SW +++ YV+NG+ +EA LFE + +V+ +++ G+ K+ + AK +F
Sbjct: 125 MPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILF 184
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVD 295
D++P RD SWN MITGYAQN EA +L + D T ++++ +
Sbjct: 185 DQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQ 244
Query: 296 EAR----MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
E R ++ + E NA+I Y + + + F + +V SWN MI +A
Sbjct: 245 EGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFA 304
Query: 352 QSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
+ G A F M + D I++ ++++ +G +SL F M + + R
Sbjct: 305 RHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRP 364
Query: 408 P-FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
F ++ + +E ++ + ++ FEA C + ALL
Sbjct: 365 EHFACLVDILSRGGQVEKAYKI---IQEMPFEADCGIWGALLA 404
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 231/443 (52%), Gaps = 20/443 (4%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
MP R +VS+N++I+GY NG D ++++F MP +++VSWN MI+G + ++ + A F
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM 206
+ MP+R+ SWN M+SG + + A R+F+ M +N IS+ ++ Y + G IE+A
Sbjct: 61 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 120
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
LF VVSW ++ G+V+ + +A+ +F++MP ++ V+ MITGY + +A
Sbjct: 121 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKA 180
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNT----VSWNAMI 316
+ LF++ P +D+ +W AM++GY QNG +EA + M P+ +T ++ + +
Sbjct: 181 KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSL 240
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
A + ++ + + ++ ++ N +IT Y + G I + F ++ D +SW A
Sbjct: 241 ASLQEGRKTHVL--VLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNA 298
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV--- 433
+IA +A+ G+ + +L F EM+ + F S+LS C + + ++
Sbjct: 299 MIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESY 358
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDAL 492
K+ F L+ + + G VE+AY +E+ + D W ++A H K L
Sbjct: 359 KIVPRPEHFA--CLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVK--L 414
Query: 493 MLFESMKTVGIKPDDITMVGILS 515
+ K V ++P + +LS
Sbjct: 415 GELAAKKIVELEPQNSGAYVVLS 437
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 43/196 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D +I IT + + G D A +F+ +P R S+NAMI+GY NG + A ++ Q
Sbjct: 158 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 217
Query: 118 M-------PQRDLVS--------------------------------WNVMISGYVRNKS 138
M L+S N +I+ Y + S
Sbjct: 218 MLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGS 277
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ + F + DVVSWN M++ +A++G+ D A F M +E + I++ LL+A
Sbjct: 278 ILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSA 337
Query: 195 YVQNGRIEEACMLFES 210
G++ E+ F S
Sbjct: 338 CGHAGKVHESLNWFNS 353
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/491 (47%), Positives = 314/491 (63%)
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
Y G++D + +F + W A+I G+ + A++LF+ M K++ S M+
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAML 131
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
T YA+ GE+ AR LFD M + D + W +I GY Q+G ++L LF M + + N
Sbjct: 132 TCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEV 191
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
SVLS C L +LE G+ +H + G + VG AL+ MY KCGS+E+A F++I
Sbjct: 192 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 251
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
DKDV++WN+MI GYA HGF ++AL LF+SM +G+ P +IT +GILSAC H+G V +G
Sbjct: 252 DDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 311
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+ F M +YG+ P +HY CMV+LLGRAG +++A L+KNM EPD WG LLGACRL
Sbjct: 312 DIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 371
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+GK L EK E++ + N+G Y+LLSN+YAA G W V+++R M+D GVKK G S
Sbjct: 372 HGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 431
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
+EV NKVH F G HP++ IY LEE+ LK G+ T +VLHD+GE EKE L
Sbjct: 432 SIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSL 491
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
HSEKLA+A+G+++ G I+++KNLRVC DCH K ISKI GR I++RD NRFHHF
Sbjct: 492 EVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHF 551
Query: 768 SGGSCSCGDYW 778
GSCSCGDYW
Sbjct: 552 VNGSCSCGDYW 562
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 21/350 (6%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV 134
G D ++ +F S + A+I G+ L G + A+Q+FD MP++ LVS M++ Y
Sbjct: 76 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYA 135
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNG 190
++ L AAR LF+ M +RD V WN M+ GY QNG + A +F RML + NE++
Sbjct: 136 KHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLS 195
Query: 191 LLAAYVQNGRIEEACMLFESKAN----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+L+A Q G +E + N + V +L+ + K L DA+ +FD++ +D
Sbjct: 196 VLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKD 255
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFD 302
V+WN+MI GYA + + EA +LF+ + T+ ++S +G V E IF+
Sbjct: 256 VVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 315
Query: 303 AMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEI 356
M ++ + + M+ + ++ A EL + M + + W T++ G+I
Sbjct: 316 KMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 375
Query: 357 THARNLFDRMPQHDCISWAAIIA---GYAQSGYSEDSLRLFIEMKRYGER 403
+ + + + + I YA G + RL MK G +
Sbjct: 376 ALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVK 425
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 155/326 (47%), Gaps = 20/326 (6%)
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+F L+ + I L +Y GR++ + LF N V W +++ G + + A
Sbjct: 53 LFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSA 112
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
+ +FD MP + VS M+T YA++ L A+ LF+ +D W M+ GY QNG +
Sbjct: 113 QQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPN 172
Query: 296 EARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMI 347
EA ++F M + N V+ ++++ Q ++ R + + NV ++
Sbjct: 173 EALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALV 232
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
Y++ G + AR +FD++ D ++W ++I GYA G+S+++L+LF M R G
Sbjct: 233 DMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNI 292
Query: 408 PFTSVLSTCANLASLELGKQLHGQLV-KVGFEA-----GCFVGNALLVMYCKCGSVEEAY 461
F +LS C + + G + ++ + G E GC V + + G VE+AY
Sbjct: 293 TFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVN-----LLGRAGHVEQAY 347
Query: 462 HAFEEI-VDKDVISWNTMIAGYARHG 486
+ + ++ D + W T++ HG
Sbjct: 348 ELVKNMNIEPDPVLWGTLLGACRLHG 373
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 151/305 (49%), Gaps = 24/305 (7%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W I H G SA +F++MP +S VS AM++ Y +G+LD AR +FD M +RD
Sbjct: 96 WTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG 155
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
V WNVMI GY +N + A LF M K + V+ ++LS Q G ++ R +
Sbjct: 156 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHS- 214
Query: 180 MLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
+E N I +N L+ Y + G +E+A ++F+ + +VV+WNS++ G+ +
Sbjct: 215 YIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQE 274
Query: 235 AKWIFD---RMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT-------WTA 283
A +F RM + +++ +++ + ++ E +F + +KD + +
Sbjct: 275 ALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNK--MKDEYGIEPKIEHYGC 332
Query: 284 MVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
MV+ + G V++A + M E + V W ++ ++ + ++ E + +N+A+
Sbjct: 333 MVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLAN 392
Query: 343 WNTMI 347
T I
Sbjct: 393 SGTYI 397
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 26/242 (10%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H L + G + + L Y G ++ + F + V W +I G+A G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
A LF++M + +++ +L+ + G ++ F M GV N
Sbjct: 108 DVVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWN---- 159
Query: 547 TCMVDLLGRAGRLDEAQNLMKNM---PFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
M+D + G +EA L + M +P+ T ++L AC G E I
Sbjct: 160 -VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI-- 216
Query: 604 MEPENAGMY------VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
EN G+ L ++Y+ G D V K+ D K V ++ + V +H
Sbjct: 217 ---ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD---KDVVAWNSMIVGYAMHG 270
Query: 658 FS 659
FS
Sbjct: 271 FS 272
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/543 (43%), Positives = 354/543 (65%), Gaps = 13/543 (2%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM- 304
D V N+++ YA+ L A+RLF+E P +D+ +WT+M++GY QN + +A ++F M
Sbjct: 108 DLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRML 167
Query: 305 -----PEKNTVSWNAMIAGYVQTKRMDMARELFEAM---TC-KNVASWNTMITGYAQSGE 355
P + T+S GY+ + + R++ C NV ++++ YA+ G
Sbjct: 168 SDGAEPNEFTLSSLVKCCGYMAS--YNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGY 225
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ A +FD++ + +SW A+IAGYA+ G E++L LF+ M+R G R ++++LS+
Sbjct: 226 LGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSS 285
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C+++ LE GK LH L+K + +VGN LL MY K GS+ +A F+++V DV+S
Sbjct: 286 CSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSC 345
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N+M+ GYA+HG GK+A F+ M GI+P+DIT + +L+ACSH L+++G YF M R
Sbjct: 346 NSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-R 404
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
Y + P HY +VDLLGRAG LD+A++ ++ MP EP A WGALLGA +++ TE+
Sbjct: 405 KYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGA 464
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AA+ +FE++P G + LL+N+YA++GRW DV+KVR M+D GVKK SW+EV+N V
Sbjct: 465 YAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSV 524
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F D HP+K++I+ E+L K+K+ G+V T VL V ++EKE L+YHSEKLA
Sbjct: 525 HVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLA 584
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+++ +L+ P G IR+MKN+RVC DCH+AIK++S +V R II+RD NRFHHF G CSCG
Sbjct: 585 LSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCG 644
Query: 776 DYW 778
DYW
Sbjct: 645 DYW 647
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 202/432 (46%), Gaps = 56/432 (12%)
Query: 79 SALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPAR----QVFDQMPQRDLVSWNV 128
+ LHV + + P R+ YN ++ G+L + V + + DLV N
Sbjct: 57 TGLHVLDLIDCGSLEPDRTL--YNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNS 114
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKN 184
++ Y R SL AR LF+ MP RD+VSW +M++GYAQN A A +F RML E N
Sbjct: 115 LLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPN 174
Query: 185 EISWN------GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
E + + G +A+Y +I C + +N V +SL+ + + LG+A +
Sbjct: 175 EFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSN--VFVGSSLVDMYARCGYLGEAMLV 232
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKV 294
FD++ ++EVSWN +I GYA+ EA LF E FT++A++S G +
Sbjct: 233 FDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCL 292
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
++ + + + + + + GYV + M YA+SG
Sbjct: 293 EQGKWL-----HAHLMKSSQKLVGYVGNTLLHM----------------------YAKSG 325
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
I A +FD++ + D +S +++ GYAQ G +++ + F EM R+G N F SVL+
Sbjct: 326 SIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLT 385
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVI 473
C++ L+ GK G + K E ++ + + G +++A EE+ ++ V
Sbjct: 386 ACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVA 445
Query: 474 SWNTMIAGYARH 485
W ++ H
Sbjct: 446 IWGALLGASKMH 457
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 164/349 (46%), Gaps = 31/349 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N + + R G + A +F+ MP R VS+ +MI+GY N + A +F +M
Sbjct: 108 DLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRML 167
Query: 119 -----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGY 169
P +S V GY+ S + R + K +V ++++ YA+ GY
Sbjct: 168 SDGAEPNEFTLSSLVKCCGYM--ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGY 225
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMG 224
A +FD++ KNE+SWN L+A Y + G EEA LF E E ++++L+
Sbjct: 226 LGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTE-FTYSALLS 284
Query: 225 GFVKQKRLGDAKWIFDRMPVRDE--VSW--NTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
L KW+ + + V + NT++ YA++ + +A+++F++ DV +
Sbjct: 285 SCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVS 344
Query: 281 WTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+M+ GY Q+G EA FD M E N +++ +++ + +D + F M
Sbjct: 345 CNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMR 404
Query: 337 CKN----VASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAG 380
N V+ + T++ ++G + A++ + MP ++ W A++
Sbjct: 405 KYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGA 453
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R+ + ++L C L L+ GK +H ++ F+ + N+LL MY +CGS+E A F
Sbjct: 73 DRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLF 132
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+E+ +D++SW +MI GYA++ DAL+LF M + G +P++ T+ ++ C +
Sbjct: 133 DEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYN 192
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + ++ YG N + +VD+ R G L EA + + + + +W AL+
Sbjct: 193 CGRQ-IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCK-NEVSWNALIAG 250
Query: 585 CRLYGKTELAEKAAEVIFEMEPE 607
Y + E+A + M+ E
Sbjct: 251 ---YARKGEGEEALALFVRMQRE 270
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQM- 118
WN I + R G + AL +F M R + +Y+A++S G L+ + + +
Sbjct: 244 WNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLM 303
Query: 119 -PQRDLVSW--NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ LV + N ++ Y ++ S+ A +F+ + K DVVS N+ML GYAQ+G A +
Sbjct: 304 KSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQ 363
Query: 176 IFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE--SKANWE--VVSWNSLMGGFV 227
FD M +E N+I++ +L A ++E F K N E V + +++
Sbjct: 364 QFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLG 423
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE-----AQRLFEEAP 274
+ L AK + MP+ V+ + G ++ + E AQR+FE P
Sbjct: 424 RAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDP 475
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/731 (35%), Positives = 409/731 (55%), Gaps = 32/731 (4%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV--- 134
+ A VF+ MP ++ +N I L + +L ++F +M L + I +
Sbjct: 185 EKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQAC 244
Query: 135 -RNKSLSAARNL----FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ +L+AA+ + F DV N ++S Y++NG + ARR+FD M +N SWN
Sbjct: 245 GKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWN 304
Query: 190 GLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++++Y G + +A LF S ++V+WN L+ G + I RM
Sbjct: 305 SMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE 364
Query: 246 ----DEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+ S +++ ++ +L + + DV+ T+++ YV+N + A
Sbjct: 365 GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSA 424
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQS 353
+ +FD M +N +WN++++GY + A L M + + +WN MI+GYA
Sbjct: 425 QAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMW 484
Query: 354 G------EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
G + H P + +SW A+I+G +Q+G + DSL+ F +M++ G N +
Sbjct: 485 GCGKEALAVLHQTKSLGLTP--NVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSA 542
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
T +L CA+L+ L+ GK++H ++ GF FV AL+ MY K S++ A+ F I
Sbjct: 543 SITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI 602
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+K + SWN MI G+A G GK+A+ +F M+ VG+ PD IT +LSAC ++GL+ +G
Sbjct: 603 QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGW 662
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+YF SM DY ++P +HY CMVDLLGRAG LDEA +L+ MP +PDA WGALLG+CR+
Sbjct: 663 KYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRI 722
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+ + AE AA+ +F++EP N+ Y+L+ NLY+ RW D+ +R M GV+ +S
Sbjct: 723 HKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWS 782
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
W+++ +VH FS + HP+ +IY L +L ++K+ G+V V ++ E EK+ +L
Sbjct: 783 WIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKIL 842
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
H+EKLA+ YG++ + AG PIRV+KN R+C DCH+A K+IS + R + LRD RFHHF
Sbjct: 843 LSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHF 902
Query: 768 SGGSCSCGDYW 778
G CSC D+W
Sbjct: 903 REGKCSCNDFW 913
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 216/437 (49%), Gaps = 23/437 (5%)
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+LM + + L A +F MP + + WN I Q+ L + LF + +
Sbjct: 173 ALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKA 232
Query: 281 WTAMVSGYVQN----GKVDEARMI----FDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
TA + +Q G ++ A+ I F + + N +I+ Y + ++++AR +F
Sbjct: 233 ETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVF 292
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSE 388
++M +N +SWN+MI+ YA G + A +LF + + D ++W +++G+ GY E
Sbjct: 293 DSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 352
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ L + M+ G + N S TSVL + L L +GK+ HG +++ GF+ +VG +L+
Sbjct: 353 EVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI 412
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY K S+ A F+ + ++++ +WN++++GY+ G +DAL L M+ GIKPD +
Sbjct: 413 DMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLV 472
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T G++S + G ++ + + G+ PN +T ++ +AG ++
Sbjct: 473 TWNGMISGYAMWGCGKEALAVLHQ-TKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQ 531
Query: 569 MPFE---PDAATWGALLGACRLYGKTELAEKAAEV----IFEMEPENAGMYVLLSNLYAA 621
M E P++A+ LL AC L +K E+ I E+ + L ++Y+
Sbjct: 532 MQQEGVMPNSASITCLLRAC---ASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSK 588
Query: 622 SGRWGDVSKVRLKMRDR 638
S + KV +++++
Sbjct: 589 SSSLKNAHKVFRRIQNK 605
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 176/416 (42%), Gaps = 82/416 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N I+ + +NG + A VF+SM R++ S+N+MIS Y G L+ A +F +
Sbjct: 266 DSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYE 325
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
+ D+ K D+V+WN +LSG+ +GY + I
Sbjct: 326 LESSDM---------------------------KPDIVTWNCLLSGHFLHGYKEEVLNIL 358
Query: 178 DRM----LEKNEISWNGLLAAYVQNGRI----EEACMLFESKANWEVVSWNSLMGGFVKQ 229
RM + N S +L A + G + E + + + +V SL+ +VK
Sbjct: 359 QRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKN 418
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMV 285
L A+ +FD M R+ +WN++++GY+ +A RL +E D+ TW M+
Sbjct: 419 HSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMI 478
Query: 286 SGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAM------ 335
SGY G EA + N VSW A+I+G Q + + F M
Sbjct: 479 SGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVM 538
Query: 336 ------TC---------------------------KNVASWNTMITGYAQSGEITHARNL 362
TC ++V +I Y++S + +A +
Sbjct: 539 PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKV 598
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
F R+ SW +I G+A G ++++ +F EM++ G + FT++LS C N
Sbjct: 599 FRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 654
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 162/401 (40%), Gaps = 47/401 (11%)
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK-RMDMARELFEAM------- 335
++S Y+ G A M+F +N + WN+ + + + + + E+F+ +
Sbjct: 72 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 131
Query: 336 ----------TCKNVAS-WNTM---------------------ITGYAQSGEITHARNLF 363
TC V W M + Y + + A +F
Sbjct: 132 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 191
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
MP + + W I QS + + LF +M+ + + VL C + +L
Sbjct: 192 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALN 251
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
KQ+HG + + G ++ + N L+ MY K G +E A F+ + +++ SWN+MI+ YA
Sbjct: 252 AAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYA 311
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
GF DA LF +++ +KPD +T +LS G E+ M + G PNS
Sbjct: 312 ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNS 370
Query: 544 KHYTCMVDLLGRAGRLD---EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
T ++ + G L+ E + F+ D +L+ +Y K A V
Sbjct: 371 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLID---MYVKNHSLTSAQAV 427
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
M+ N + L + Y+ G + D ++ +M G+K
Sbjct: 428 FDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 468
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 121/269 (44%), Gaps = 6/269 (2%)
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS-GYSEDSLRLFIEMKR 399
A+ +I+ Y G+ A +F + + W + + + S G L +F E+
Sbjct: 67 AAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG 126
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G + ++ L TC + + LG ++HG L+K GF+ ++ AL+ Y +C +E+
Sbjct: 127 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 186
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F E+ + + + WN I + + + LF M+ +K + T+V +L AC
Sbjct: 187 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 246
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
G + + + R +G+ + ++ + + G+L+ A+ + +M + ++W
Sbjct: 247 MGALNAAKQIHGYVFR-FGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWN 304
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPEN 608
+++ + Y A + +E+E +
Sbjct: 305 SMISS---YAALGFLNDAWSLFYELESSD 330
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/502 (44%), Positives = 324/502 (64%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D+F TA+V Y + G+ D AR FD P ++ N M+A YV + AR +F+ M
Sbjct: 74 DLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMR 133
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+++ SWNTMI GYA +GE+ AR +F+ M D SW+++++ Y + S+D+L L+ E
Sbjct: 134 ERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWRE 193
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ + + SVLS C+++ +L +G ++H + G E +G AL+ MY KCG
Sbjct: 194 MRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGD 253
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+E + F + KDV++W++MI G A HGFG DAL LF M + G++P+++T +G+L +
Sbjct: 254 IENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLIS 313
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C+H GLV G +YF SM+ +GV P +HY CMVDLLGR+G ++EA+ L+++MPFEPDA
Sbjct: 314 CTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAV 373
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W ALLGACR+Y E+AE+A + ++P G YVLLSN+YA + W V+++R +R
Sbjct: 374 IWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLR 433
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
++++ G S +E QN +H F GD HP IY L E+ +L+Q G+ T LVL
Sbjct: 434 RERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQ 493
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
D+ E+ KE L HSEKLAVA+G+L+ PAG +R+ KNLR CEDCH+AIK I+ + R +
Sbjct: 494 DIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSAIKLIALLYERKL 553
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
I+RD NRFHHFS G CSC DYW
Sbjct: 554 IIRDRNRFHHFSEGRCSCKDYW 575
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 24/306 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
A++ Y G+ D AR FD+ P+RD+ NVM++ YV ++ AR +F+ M +RD+V
Sbjct: 79 TALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMV 138
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR----------IEEAC 205
SWNTM+ GYA NG D AR +F+ M +++ SW+ +++AY + R + AC
Sbjct: 139 SWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAAC 198
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT-MITGYAQNNYLA 264
+ + V+S S MG + + V +V T +I YA+ +
Sbjct: 199 VNPDCTTMVSVLSACSDMGALAVG---AEVHQFVESNGVELDVKLGTALIDMYAKCGDIE 255
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYV 320
+ R+F PVKDV TW++M+ G +G +A +F M + N V++ ++
Sbjct: 256 NSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCT 315
Query: 321 QTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISW 374
+ ++ F +M+ V + M+ +SG I A+ L MP + D + W
Sbjct: 316 HLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIW 375
Query: 375 AAIIAG 380
A++
Sbjct: 376 RALLGA 381
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 174/412 (42%), Gaps = 35/412 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ NV + ++ G A VF+ M R VS+N MI GY +NG++D AR+VF+ M
Sbjct: 105 DVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMD 164
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARR 175
RD SW+ M+S Y + + A L+ M D + ++LS + G A A
Sbjct: 165 DRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMG-ALAVGA 223
Query: 176 IFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
+ +E N + + L+ Y + G IE + +F S +V++W+S++ G
Sbjct: 224 EVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHG 283
Query: 231 RLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT-----W 281
DA +F RM +EV++ ++ +++ ++ F V T +
Sbjct: 284 FGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHY 343
Query: 282 TAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
MV ++G ++EA+ + MP E + V W A++ K +++A E + +
Sbjct: 344 GCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDP 403
Query: 341 AS---WNTMITGYAQSG--------EITHARNLFDRMPQHDCISWA----AIIAGYAQSG 385
+ + + YAQ+ T R R+P I W I+G
Sbjct: 404 HADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHP 463
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
S++ ++ EM + P T ++ + S E H + + V F
Sbjct: 464 RSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAF 515
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
HAR L D A++ YA++G ++ + F E R R F L
Sbjct: 62 HARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPR------RDVF---LCNVM 112
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVG-NALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A + G+ + V G V N ++ Y G V+ A F + D+D SW+
Sbjct: 113 LAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWS 172
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
+M++ Y + KDAL L+ M+ + PD TMV +LSACS G + G E +
Sbjct: 173 SMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAE-VHQFVES 231
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
GV + K T ++D+ + G ++ + + +MP + D TW +++
Sbjct: 232 NGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVK-DVLTWSSMI 276
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 19/237 (8%)
Query: 428 LHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
LH + +K GF A FV AL+ Y K G + A AF+E +DV N M+A Y G
Sbjct: 61 LHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRG 120
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPNSKH 545
+A +F+ M+ + D ++ ++ + G V+ E F M +RD +
Sbjct: 121 EVAEARRVFDGMR----ERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRD------AFS 170
Query: 546 YTCMVDLLGRAGRLDEAQNL---MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
++ M+ + R +A L M+ PD T ++L AC G + + + +
Sbjct: 171 WSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVE 230
Query: 603 EMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
E + + L ++YA + GD+ VK V +S + + H F
Sbjct: 231 SNGVELDVKLGTALIDMYA---KCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGF 284
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 269/750 (35%), Positives = 417/750 (55%), Gaps = 35/750 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I + + G D+A+ VF+ MP R+ VS+N++ISG+ NG ++ FD +
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENG---FSKDCFDMLV 121
Query: 120 QR---------DLVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQ 166
+ D+ + ++ R + + + K DV N+++ Y++
Sbjct: 122 EMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSK 181
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN-----S 221
GY A+ +FD+ KN +SWN ++ G I EA LF E + N +
Sbjct: 182 CGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLN 241
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
++ ++ +L K + +R DE+ N + YA+ L A+R+F K
Sbjct: 242 ILPACLEISQLRSLKELHG-YSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK 300
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARE 330
V +W A++ G QNG +A ++ M P+ T+ + + ++++ R
Sbjct: 301 TVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVH 360
Query: 331 LFEAMTCKNVASWN--TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
F + S+ ++++ Y GE + AR LFD M + +SW A+I+GY+Q+G E
Sbjct: 361 GFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPE 420
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
D+L LF ++ G + + SVL C+ ++L LGK+ H +K FV + +
Sbjct: 421 DALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTI 480
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY K G ++E+ F+ + +KD+ SWN +IA Y HG G++++ LFE M+ VG PD
Sbjct: 481 DMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGF 540
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T +GIL+ CSH GLVE+G +YF M +G+ P +HY C++D+LGRAGRLD+A L+
Sbjct: 541 TFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHE 600
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MP +PD+ W +LL CR +G+ E+ + AE + E+EP+N YV LSNLYA SGRW DV
Sbjct: 601 MPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDV 660
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+VR ++D G++K G SW+E+ KVH+F GD L P+ + +LE K+ + G+
Sbjct: 661 RRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYK 720
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
+T VLHDV EE+K LR HSEKLA+ +G+L+ G +R+ KNLR+C DCHNA K +
Sbjct: 721 PNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFM 780
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S++ GR II+RDN RFHHF G CSCGDYW
Sbjct: 781 SEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 389 DSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
D++ +F+++ E + F V+ C LG+ +HG ++K+G FVGNAL
Sbjct: 13 DAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL 72
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL-MLFESMK-TVGIKP 505
+ MY K G V+ A F + ++++SWN++I+G++ +GF KD ML E M G+ P
Sbjct: 73 IAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLP 132
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D T+V +L C+ V+ G + + G+ + + +VD+ + G L EAQ L
Sbjct: 133 DIATLVTVLPVCAREVDVQMGIR-IHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQML 191
Query: 566 MKNMPFEPDAATWGALLGA 584
+A +W ++G
Sbjct: 192 FDKNN-RKNAVSWNTMIGG 209
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 286/815 (35%), Positives = 422/815 (51%), Gaps = 99/815 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVF 115
D W IT + +G A+ +F+ M R +V++ A++ G L R +
Sbjct: 92 DEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + L V N+++ Y +++A LFE M +RD+VSWN ++ AQ+G
Sbjct: 152 AWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLG 210
Query: 172 AARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGF 226
A +F RM LE + L+ A I +A ++ ES +V +L +
Sbjct: 211 IALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAY 270
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---------------- 270
+ L AK +FDR RD VSWN M+ YAQ+ +++EA LF
Sbjct: 271 ARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLV 330
Query: 271 --------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
E+ +D+ A++ Y + G +EAR +F +P N V
Sbjct: 331 NASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAV 389
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS---------------------------- 342
SWN MIAG Q +M A ELF+ M + +A
Sbjct: 390 SWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKL 449
Query: 343 ---------------WNTMITGYAQSGEITHARNLFDRMP---QHDCISWAAIIAGYAQS 384
++ YA G I A F R +HD +SW AII+ +Q
Sbjct: 450 HSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQH 509
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G+ + +L F M +G N+ +VL CA A+L G+ +H L G E+ FV
Sbjct: 510 GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVA 569
Query: 445 NALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
AL MY +CGS+E A FE++ V++DV+ +N MIA Y+++G +AL LF M+ G
Sbjct: 570 TALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGS 629
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+PD+ + V +LSACSH GL ++G E F SM + YG+ P+ HY C VD+LGRAG L +A+
Sbjct: 630 RPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAE 689
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
L++ M +P W LLGACR Y + A ++ E++P + YV+LSN+ A +G
Sbjct: 690 ELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAG 749
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W + ++VR +M RG++K G SW+E++++VH F GD HP + IY LE L +++
Sbjct: 750 KWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIR 809
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+V T+LVL V E EKE +L HSE+LA+A G++S + +RVMKNLRVCEDCHN
Sbjct: 810 EIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMS-SSTDTVRVMKNLRVCEDCHN 868
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A K ISKIV + I++RD +RFHHF GSCSCGDYW
Sbjct: 869 ATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 193/450 (42%), Gaps = 85/450 (18%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPV 275
N L+ ++K + LGD + +F R+ VRDE SW T+IT Y ++ A R+ +E
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVR 125
Query: 276 KDVFTWTAMVSGYVQNGKVDEAR-----------------------------------MI 300
D T+ A++ + G + + R ++
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLL 185
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-------------------- 340
F+ M E++ VSWNA IA Q+ + +A ELF+ M + V
Sbjct: 186 FEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQA 244
Query: 341 ----------------ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ + YA+ G + A+ +FDR + D +SW A++ YAQ
Sbjct: 245 QAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQH 304
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G+ ++ LF M G ++ + + C +SL G+ +HG ++ G + +G
Sbjct: 305 GHMSEAALLFARMLHEGISPSKVTLVNASTGC---SSLRFGRMIHGCALEKGLDRDIVLG 361
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NALL MY +CGS EEA H F+ I + +SWNTMIAG ++ G K A+ LF+ M+ G+
Sbjct: 362 NALLDMYTRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMA 420
Query: 505 PDDITMVGILSACSHTGLVEKGT---EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
P T + +L A + + +S G T +V + G +DE
Sbjct: 421 PVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDE 480
Query: 562 AQNLMKNMPFEP--DAATWGALLGACRLYG 589
A + E D +W A++ + +G
Sbjct: 481 AAASFQRGAMEDRHDVVSWNAIISSLSQHG 510
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 176/369 (47%), Gaps = 27/369 (7%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
N ++ Y + L + + +F V+D +WT +++ Y ++G+ A +F M ++
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVR 125
Query: 308 -NTVSWNAMIAGYVQTKRMDMARELF-----EAMTCKNVASWNTMITGYAQSGEITHARN 361
+ V++ A++ + + R + + K+V + N ++ Y G + A
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLA-NLLLHIYGSCGCVASAML 184
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF++M + D +SW A IA AQSG +L LF M+ G R R L+ C A+
Sbjct: 185 LFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVC---AT 240
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+ + +H + + G E V AL Y + G + +A F+ ++DV+SWN M+
Sbjct: 241 IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGA 300
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT--GLVEKGTEYFYSMNRDYGV 539
YA+HG +A +LF M GI P +T+V + CS G + G ++RD V
Sbjct: 301 YAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDI-V 359
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ N+ ++D+ R G +EA++L K +P +A +W ++ G+ ++A E
Sbjct: 360 LGNA-----LLDMYTRCGSPEEARHLFKRIPC--NAVSWNTMIAGSSQKGQM---KRAVE 409
Query: 600 VIFEMEPEN 608
+ M+ E
Sbjct: 410 LFQRMQLEG 418
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L G+++H ++V +G E +GN LL +Y KC S+ + F + +D SW T+I
Sbjct: 45 LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y HG K A+ +F M+ G++ D +T + +L AC+ G + +G ++ + G+
Sbjct: 103 YTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS-IHAWIVESGLKG 161
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
S ++ + G G + A L + M E D +W A + A
Sbjct: 162 KSVLANLLLHIYGSCGCVASAMLLFEKM--ERDLVSWNAAIAA 202
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/653 (38%), Positives = 381/653 (58%), Gaps = 16/653 (2%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQ 197
AR +F+ +P+ + WNTM+ GY++ + ++ ML N ++ LL + +
Sbjct: 60 ARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTR 119
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQ---KRLGD-AKWIFDRMPVRDEVSWNTM 253
N ++ +L S + F+ RL D A+ +FD + V+WN M
Sbjct: 120 NMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIM 179
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFD----AMP 305
++GY + +++ LF E + V T M+S + ++ + I+ +
Sbjct: 180 LSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIV 239
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
E+N + N +I + MD A+ +F+ M ++V SW +++TG+A G+I AR FD+
Sbjct: 240 ERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQ 299
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
+P+ D +SW A+I GY + ++L LF EM+ + + S+L+ CA+L +LELG
Sbjct: 300 IPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELG 359
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+ + + K + FVGNAL+ MY KCG+V +A F+E+ KD +W MI G A +
Sbjct: 360 EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAIN 419
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G G++AL +F +M I PD+IT +G+L AC+H G+VEKG +F SM +G+ PN H
Sbjct: 420 GHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTH 479
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y CMVDLLGRAGRL+EA ++ NMP +P++ WG+LLGACR++ +LAE AA+ I E+E
Sbjct: 480 YGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELE 539
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
PEN +YVLL N+YAA RW ++ +VR M +RG+KK G S +E+ V+ F GD H
Sbjct: 540 PENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSH 599
Query: 666 PEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
P+ IYA LE + L + G+ T V D+GEE+KE L HSEKLA+AY ++S
Sbjct: 600 PQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGP 659
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IR++KNLR+C DCH+ K +S+ R +I+RD RFHHF GSCSC ++W
Sbjct: 660 GITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 208/505 (41%), Gaps = 94/505 (18%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTM 160
+G++ ARQVFD +PQ L WN MI GY R +++ +M K D ++ +
Sbjct: 54 SGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFL 113
Query: 161 LSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
L G+ +N + + + + + N + + ++ A +F+ WEV
Sbjct: 114 LKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEV 173
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPV-------------------------------- 244
V+WN ++ G+ + K+ +K +F M
Sbjct: 174 VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY 233
Query: 245 -------RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
R+ + N +I +A + EAQ +F+ +DV +WT++V+G+ G++D A
Sbjct: 234 INGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLA 293
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----------------- 340
R FD +PE++ VSW AMI GY++ R A LF M NV
Sbjct: 294 RKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHL 353
Query: 341 -----ASW-----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
W N +I Y + G + A+ +F M D +W A+I
Sbjct: 354 GALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMI 413
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGF 437
G A +G+ E++L +F M + + VL C + +E G+ + ++ G
Sbjct: 414 VGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGI 473
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ ++ + + G +EEA+ + V + I W +++ H + A M
Sbjct: 474 KPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEM--A 531
Query: 497 SMKTVGIKPDD----ITMVGILSAC 517
+ + + ++P++ + + I +AC
Sbjct: 532 AKQILELEPENGAVYVLLCNIYAAC 556
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 179/373 (47%), Gaps = 24/373 (6%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV-- 154
A I + L +D AR+VFD ++V+WN+M+SGY R K ++ LF M KR V
Sbjct: 147 AFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSP 206
Query: 155 --VSWNTMLSGYAQNGYADAARRIFDR----MLEKNEISWNGLLAAYVQNGRIEEACMLF 208
V+ MLS ++ + + I+ ++E+N I N L+ + G ++EA +F
Sbjct: 207 NSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVF 266
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
++ N +V+SW S++ GF ++ A+ FD++P RD VSW MI GY + N EA
Sbjct: 267 DNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALA 326
Query: 269 LFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMI---FDAMPEKN-TVSWNAMIAGYV 320
LF E + +V FT ++++ G ++ + D KN T NA+I Y
Sbjct: 327 LFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYF 386
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAA 376
+ + A+++F+ M K+ +W MI G A +G A +F M + D I++
Sbjct: 387 KCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIG 446
Query: 377 IIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++ +G E FI M ++G + N + + ++ LE + H +V +
Sbjct: 447 VLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLE---EAHEVIVNM 503
Query: 436 GFEAGCFVGNALL 448
+ V +LL
Sbjct: 504 PVKPNSIVWGSLL 516
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 162/375 (43%), Gaps = 72/375 (19%)
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNT 345
++GK+ AR +FDA+P+ WN MI GY + ++ M N+ ++
Sbjct: 53 ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPF 112
Query: 346 MITGYAQSGEITH-----------------------------------ARNLFDRMPQHD 370
++ G+ ++ + + AR +FD +
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
++W +++GY + + S LFIEM++ G N +LS C+ L LE GK ++
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG---- 486
+ E + N L+ M+ CG ++EA F+ + ++DVISW +++ G+A G
Sbjct: 233 YINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDL 292
Query: 487 ----FGK-----------------------DALMLFESMKTVGIKPDDITMVGILSACSH 519
F + +AL LF M+ +KPD+ TMV IL+AC+H
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAH 352
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
G +E G E+ + + ++ ++D+ + G + +A+ + K M D TW
Sbjct: 353 LGALELG-EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM-HHKDKFTWT 410
Query: 580 ALLGACRLYGKTELA 594
A++ + G E A
Sbjct: 411 AMIVGLAINGHGEEA 425
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 4/253 (1%)
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+SG++ +AR +FD +PQ W +I GY++ + ++ + +++ M + +R F
Sbjct: 53 ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPF 112
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L +L+ GK L VK GF++ FV A + M+ C V+ A F+ +
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWE 172
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
V++WN M++GY R K + MLF M+ G+ P+ +T+V +LSACS +E G +
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232
Query: 532 SMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
+N G++ N ++D+ G +DEAQ++ NM D +W +++ G+
Sbjct: 233 YING--GIVERNLILENVLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFANIGQ 289
Query: 591 TELAEKAAEVIFE 603
+LA K + I E
Sbjct: 290 IDLARKYFDQIPE 302
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 163/369 (44%), Gaps = 59/369 (15%)
Query: 71 HMRNGC--CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP--------- 119
HM + C D A VF+ V++N M+SGY Q ++ +F +M
Sbjct: 150 HMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSV 209
Query: 120 ------------------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
+R+L+ NV+I + + A+++F+ M
Sbjct: 210 TLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNM 269
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
RDV+SW ++++G+A G D AR+ FD++ E++ +SW ++ Y++ R EA LF
Sbjct: 270 KNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFR 329
Query: 210 ----SKANWEVVSWNSLMGGFVKQKRLGDAKWI---FDRMPVR-DEVSWNTMITGYAQNN 261
S + + S++ L +W+ D+ ++ D N +I Y +
Sbjct: 330 EMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCG 389
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIA 317
+ +A+++F+E KD FTWTAM+ G NG +EA +F M E + +++ ++
Sbjct: 390 NVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLC 449
Query: 318 GYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP-QHDC 371
++ + F +MT + NV + M+ ++G + A + MP + +
Sbjct: 450 ACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNS 509
Query: 372 ISWAAIIAG 380
I W +++
Sbjct: 510 IVWGSLLGA 518
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 161/365 (44%), Gaps = 27/365 (7%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
R+ + N +I + G++D A+ VFD M RD++SW +++G+ + AR F+ +
Sbjct: 241 RNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQI 300
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA- 204
P+RD VSW M+ GY + A +F M ++ +E + +L A G +E
Sbjct: 301 PERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE 360
Query: 205 ---CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+ ++ + N+L+ + K +G AK +F M +D+ +W MI G A N
Sbjct: 361 WVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAING 420
Query: 262 YLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSW 312
+ EA +F E + D T+ ++ G V++ + F +M + N +
Sbjct: 421 HGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHY 480
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGY-----AQSGEITHARNLFDRM 366
M+ + R++ A E+ M K N W +++ Q E+ A+ + +
Sbjct: 481 GCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMA-AKQILELE 539
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
P++ + + + YA E+ ++ M G + ++P S++ N+ G
Sbjct: 540 PENGAV-YVLLCNIYAACKRWENLRQVRKLMMERG--IKKTPGCSLMELNGNVYEFVAGD 596
Query: 427 QLHGQ 431
Q H Q
Sbjct: 597 QSHPQ 601
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 20/283 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
NV I G D A VF++M R +S+ ++++G+ GQ+D AR+ FDQ+P+RD V
Sbjct: 247 NVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYV 306
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
SW MI GY+R A LF M K D + ++L+ A G + +
Sbjct: 307 SWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWV-KTY 365
Query: 181 LEKNEIS-----WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
++KN I N L+ Y + G + +A +F+ + + +W +++ G +A
Sbjct: 366 IDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEA 425
Query: 236 KWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVS 286
+F M DE+++ ++ + + Q F ++ +V + MV
Sbjct: 426 LAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVD 485
Query: 287 GYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMA 328
+ G+++EA + MP K N++ W +++ K + +A
Sbjct: 486 LLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLA 528
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 57/270 (21%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ W +T G D A F+ +P R VS+ AMI GYL + A +F +M
Sbjct: 273 DVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQ 332
Query: 120 ---------------------------------------QRDLVSWNVMISGYVRNKSLS 140
+ D N +I Y + ++
Sbjct: 333 MSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVG 392
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYV 196
A+ +F+ M +D +W M+ G A NG+ + A +F M+E +EI++ G+L A
Sbjct: 393 KAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACT 452
Query: 197 QNGRIEEACMLFES-------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G +E+ F S K N V + ++ + RL +A + MPV+ + +
Sbjct: 453 HAGMVEKGQSFFISMTMQHGIKPN--VTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSI 510
Query: 249 SWNTMITG--YAQNNYLAE--AQRLFEEAP 274
W +++ +N LAE A+++ E P
Sbjct: 511 VWGSLLGACRVHKNVQLAEMAAKQILELEP 540
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/756 (34%), Positives = 413/756 (54%), Gaps = 85/756 (11%)
Query: 108 LDPARQVFDQM---PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
L+ RQ+ D++ ++ N ++ Y + S+++AR F+ + +++ SW +ML+ Y
Sbjct: 40 LESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAY 99
Query: 165 AQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKA-----NWEVVS 218
AQNG+ AA ++ RM L+ N + + +L A +EE + + +V+
Sbjct: 100 AQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVIL 159
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-D 277
NSL+ + K L DAK +F+RM R SWN MI YAQ+ + EA RL+E+ V+
Sbjct: 160 ENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPS 219
Query: 278 VFTWTAMVS-----GYVQNGK------------------------------VDEARMIFD 302
V T+T+++S G + G+ +D+A IF
Sbjct: 220 VRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQ 279
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN- 344
+P ++ VSW+AMIA + +T D A E + M C +V
Sbjct: 280 RLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRA 339
Query: 345 ---------------TMITG------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
T++ G Y G + AR+LFD++ D W +I GY++
Sbjct: 340 GRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 399
Query: 384 SGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
G+ L L+ EMK + + ++ V+S CA+L + +Q H + G +
Sbjct: 400 QGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV 459
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+ +L+ MY + G++E A F+++ +D ++W T+IAGYA+HG AL L++ M+ G
Sbjct: 460 LATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEG 519
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+P ++T + +L ACSH GL E+G + F S+ DY + PN HY+C++DLL RAGRL +A
Sbjct: 520 AEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDA 579
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ L+ MP EP+ TW +LLGA R++ + A AA I +++P + YVLLSN++A +
Sbjct: 580 EELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVT 639
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
G ++ VR M RGVKK G SW+EV +++H F+VGD HP I+A L+ L K+
Sbjct: 640 GNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKI 699
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
K+ G+V ++ VLHDVGE+EKE +LR HSEKLA+A+G+++ G +R+ LR+C DCH
Sbjct: 700 KEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCH 759
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+A+K IS I R II+RD++RFH F G CSCGDYW
Sbjct: 760 SAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 184/428 (42%), Gaps = 60/428 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N +T + + G + A +F M RS S+NAMI+ Y +G + A ++++ M
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD 215
Query: 119 -----------------------------------PQRDLVSWNVMISGYVRNKSLSAAR 143
+ DL N +++ Y R K L A
Sbjct: 216 VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 275
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNG 199
+F+ +P+RDVVSW+ M++ +A+ D A + +M + N ++ +L A G
Sbjct: 276 KIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 335
Query: 200 RIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ + + + +V+ +L+ + L +A+ +FD++ RDE W +I
Sbjct: 336 DLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIG 395
Query: 256 GYAQNNYLAEAQRLFEE------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
GY++ + L+ E P + ++ ++S G +AR +
Sbjct: 396 GYSKQGHRTGVLELYREMKNTTKVPATKII-YSCVISACASLGAFADARQAHSDIEADGM 454
Query: 310 VS----WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+S +++ Y + ++ AR++F+ M+ ++ +W T+I GYA+ GE A L+
Sbjct: 455 ISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKE 514
Query: 366 M----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YGERLNRSPFTSVLSTCANLA 420
M + +++ ++ + +G E +LFI ++ Y N + ++ ++ +
Sbjct: 515 MELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAG 574
Query: 421 SLELGKQL 428
L ++L
Sbjct: 575 RLSDAEEL 582
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 162/392 (41%), Gaps = 67/392 (17%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY--------------- 102
+ D+ N +T + R C D A +F +PRR VS++AMI+ +
Sbjct: 252 ELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSK 311
Query: 103 ----------------LLN----GQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKS 138
LL G L R V DQ+ + LV+ ++ Y S
Sbjct: 312 MQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGS 371
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-----LEKNEISWNGLLA 193
L AR+LF+ + RD W ++ GY++ G+ ++ M + +I ++ +++
Sbjct: 372 LDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVIS 431
Query: 194 AYVQNGRIEEACMLFESKANWEV-------VSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
A G +A ++ ++ E V SL+ + + L A+ +FD+M RD
Sbjct: 432 ACASLGAFADA---RQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRD 488
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF- 301
++W T+I GYA++ A L++E ++ T+ ++ G ++ + +F
Sbjct: 489 TLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFI 548
Query: 302 ----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG---YAQS 353
D N ++ +I + R+ A EL AM + N +W++++ +
Sbjct: 549 SIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDV 608
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
THA ++ D S+ + +A +G
Sbjct: 609 KRATHAAGQITKLDPVDPASYVLLSNVHAVTG 640
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 42/281 (14%)
Query: 392 RLFIEMKRYGERLNRSP-FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
R ++ ++ G R + S + L C +L S+ +Q+H ++ A F+GN ++
Sbjct: 12 RFQLKEEKAGSRFDSSGHYRDALRQCQDLESV---RQIHDRISGAA-SANVFLGNEIVRA 67
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCGSV A AF+ I K+ SW +M+ YA++G + AL L++ M ++P+ +
Sbjct: 68 YGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD---LQPNPVVY 124
Query: 511 VGILSACSHTGLVEKGTEY-------------------FYSMNRDYGVIPNSKH------ 545
+L AC+ +E+G +M G + ++K
Sbjct: 125 TTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184
Query: 546 ------YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ M+ ++G +EA L ++M EP T+ ++L AC G + K
Sbjct: 185 GRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHA 244
Query: 600 VIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKV--RLKMRD 637
+I E + + L +YA D +K+ RL RD
Sbjct: 245 LISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRD 285
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/724 (36%), Positives = 404/724 (55%), Gaps = 40/724 (5%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--------PQRDLVSWNVMISGYVRNKS 138
MP R++VS+ +I GY+ + QLD +F ++ P +++S +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
S ++++ + + ++ YA G ++AR+ FD + K+ +SW G++A Y +N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGF--VKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
R +++ LF A +V +N F V + +G + V V + T
Sbjct: 121 DRFQDSLQLF---AEMRMVGFNPNHFTFAGVLKACIG-----LEAFSVGKSVHGCVLKTC 172
Query: 257 YAQNNYLA--------------EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
Y + Y+ + R+FEE P DV W+ M+S Y Q+ + EA +F
Sbjct: 173 YEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFG 232
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK--------NVASWNTMITGYAQSG 354
M + A +Q+ +L + + C NV N ++ YA+ G
Sbjct: 233 QMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCG 292
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ ++ LF +P + ++W +I GY QSG + +L L+ M + + ++SVL
Sbjct: 293 RLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLR 352
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA+LA++ELG Q+H +K ++ VGNAL+ MY KCGS++ A F+ + ++D IS
Sbjct: 353 ACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEIS 412
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WN MI+GY+ HG +AL F+ M+ P+ +T V ILSACS+ GL++ G YF SM
Sbjct: 413 WNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMV 472
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+DYG+ P +HYTCMV LLGR+G LD+A L++ +P EP+ W ALLGAC ++ +L
Sbjct: 473 QDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLG 532
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
+A+ I +++P++ +VLLSN+YA + RW V+ VR M+++GVKK G SW+E Q
Sbjct: 533 IMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGI 592
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
VH FSVGDT HP+ I LE L K ++ G+V VL DV ++EK+ L HSE+L
Sbjct: 593 VHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERL 652
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+G++ P+ IR++KNLR+C DCH+AIK ISKIV R II+RD NRFHHF G CSC
Sbjct: 653 ALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSC 712
Query: 775 GDYW 778
GDYW
Sbjct: 713 GDYW 716
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 148/334 (44%), Gaps = 57/334 (17%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQR--- 121
+ + G + L VF MP+ + ++ MIS Y + Q A ++F QM P +
Sbjct: 187 YTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTF 246
Query: 122 ------------------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
++ N ++ Y + L + LF +P
Sbjct: 247 ASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPN 306
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML 207
R+ V+WNTM+ GY Q+G D A ++ MLE +E++++ +L A +E +
Sbjct: 307 RNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQI 366
Query: 208 ----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
++ + +VV N+L+ + K + +A+ +FD + RDE+SWN MI+GY+ + +
Sbjct: 367 HSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLV 426
Query: 264 AEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNA 314
EA + F E V + T+ +++S G +D + F +M + + +
Sbjct: 427 GEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTC 486
Query: 315 MIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
M+ ++ +D A +L E + + NV W ++
Sbjct: 487 MVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALL 520
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 152/337 (45%), Gaps = 36/337 (10%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D ++ N + + + G D+++ +F +P R+ V++N MI GY+ +G D A
Sbjct: 271 KVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALS 330
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNL--------FEMMPKRDVVSWNTMLSGYA 165
++ M + + + V S +R + AA L + + +DVV N ++ YA
Sbjct: 331 LYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYA 390
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV----SWNS 221
+ G AR +FD + E++EISWN +++ Y +G + EA F+ E V ++ S
Sbjct: 391 KCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVS 450
Query: 222 LMGGFVKQKRLGDAKWIFDRM-------PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
++ L + F M P + + M+ ++ +L +A +L EE P
Sbjct: 451 ILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEH--YTCMVWLLGRSGHLDKAVKLIEEIP 508
Query: 275 VK-DVFTWTAMVSGYVQNGKVD----EARMIFDAMPEKNTVSWNAMIAG-YVQTKRMDMA 328
++ +V W A++ V + VD A+ I P+ + +++ Y +T+R +
Sbjct: 509 LEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEAT--HVLLSNIYARTRRWNSV 566
Query: 329 RELFEAMTCKNVA-----SW--NTMITGYAQSGEITH 358
+ + M K V SW N I Y G+ +H
Sbjct: 567 ASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSH 603
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 274/791 (34%), Positives = 411/791 (51%), Gaps = 124/791 (15%)
Query: 91 SSVSY-NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
SSV+ N +++ Y G L A +VFD++ +RD VSWN +IS R + A F +M
Sbjct: 45 SSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLM 104
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
++ G+ + + + + L K + W G +I C
Sbjct: 105 ----------LMEGFEPSSFTLVSMALACSNLRKRDGLWLG--------KQIHGCCF--- 143
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
K +W S N+LM + K RL DAK + RD V+WN+MI+ ++QN EA
Sbjct: 144 RKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMF 203
Query: 270 FE----------------------------------------EAPVKDVFTWTAMVSGYV 289
+ +++ F +A+V Y
Sbjct: 204 LRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYC 263
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT------------- 336
G+V+ R++FD++ ++ WNAMIAGY Q++ + A LF M
Sbjct: 264 NCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMS 323
Query: 337 --------CKNVAS-------------------WNTMITGYAQSGEITHARNLFDRMPQH 369
C+ ++ N +I Y++ G+I ++ +FD M
Sbjct: 324 SIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR 383
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN---------RSPFT-------SVL 413
D +SW II Y G S D+L L EM+R E+ + PF +VL
Sbjct: 384 DIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVL 443
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
CA+L++L GK++H ++ + VG+AL+ MY KCG + A F+++ ++VI
Sbjct: 444 PGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVI 503
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVG-----IKPDDITMVGILSACSHTGLVEKGTE 528
+WN +I Y HG GK++L LFE M G +KP ++T + + ++CSH+G+V++G
Sbjct: 504 TWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLS 563
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD-AATWGALLGACRL 587
F+ M ++G+ P HY C+VDL+GRAG+++EA L+ MP D W +LLGACR+
Sbjct: 564 LFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRI 623
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
Y E+ E AAE + +++P+ A YVLLSN+Y+++G W +R +M+ GVKK G S
Sbjct: 624 YHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCS 683
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
W+E ++VH F GD HP+ ++++ +LE L +LK++G+V T VLHD+ EEEKE +L
Sbjct: 684 WIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETIL 743
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
HSEKLA+A+GIL+ P G IRV KNLRVC DCH A K ISKI R IILRD RFHHF
Sbjct: 744 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHF 803
Query: 768 SGGSCSCGDYW 778
G+CSCGDYW
Sbjct: 804 KDGTCSCGDYW 814
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 116/564 (20%), Positives = 224/564 (39%), Gaps = 89/564 (15%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA----R 112
G W N + + + G D A + R V++N+MIS + N + A R
Sbjct: 146 GHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLR 205
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG-----YAQN 167
+ + + D V++ ++ L + + + D V N+ + Y
Sbjct: 206 LMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNC 265
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANW--EVVSWNSL 222
G ++ R +FD +L++ WN ++A Y Q+ E+A MLF E+ A + +S+
Sbjct: 266 GQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSI 325
Query: 223 MGGFVK----QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
+ +V+ ++ G ++ R + N +I Y++ + ++R+F+ +D+
Sbjct: 326 VPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDI 385
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAM-------------------PEK-NTVSWNAMIAG 318
+W +++ YV G+ +A ++ M P K N+++ ++ G
Sbjct: 386 VSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPG 445
Query: 319 YVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+ +E+ + V + ++ YA+ G + AR +FD+MP + I+W
Sbjct: 446 CASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITW 505
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGE-----RLNRSPFTSVLSTCANLASLELGKQL- 428
II Y G ++SL LF +M G + F ++ ++C++ ++ G L
Sbjct: 506 NVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLF 565
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H + G E ++ + + G VEEAY NTM +G+ + G
Sbjct: 566 HKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLV-----------NTMPSGFDKVG-- 612
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSKH 545
+L AC +E G E + D + H
Sbjct: 613 --------------------AWSSLLGACRIYHNIEIGEIAAENLLQLQPDV-----ASH 647
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNM 569
Y + ++ AG D+A NL + M
Sbjct: 648 YVLLSNIYSSAGLWDKAMNLRRRM 671
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 18/186 (9%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF----VGNALLVMYCKCGSVEEAYHAF 464
F +VL A + L LGKQ+H + K G+ G F + N L+ MY KCG + +AY F
Sbjct: 13 FPAVLKAVAGIQELYLGKQIHAHVFKFGY--GSFSSVTIDNTLVNMYGKCGGLGDAYKVF 70
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ I ++D +SWN++I+ R + A+ F M G +P T+V + ACS+
Sbjct: 71 DRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNL---- 126
Query: 525 KGTEYFYSMNRDYGVIPNSKHY-----TCMVDLLGRAGRLDEAQNLMKNMPFEP-DAATW 578
+ + + + +G H+ ++ + + GRLD+A++L+ + FE D TW
Sbjct: 127 RKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLL--VLFEDRDLVTW 184
Query: 579 GALLGA 584
+++ +
Sbjct: 185 NSMISS 190
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 266/737 (36%), Positives = 407/737 (55%), Gaps = 89/737 (12%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKN 184
++S + R S+ A +FE + + V ++TML G+A+ D A + F RM +E
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 185 EISWNGLLA-----AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
++ LL A ++ G+ E +L +S + ++ + L + K +++ +A+ +F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGK-EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---EAPVKDVFTW--------------- 281
DRMP RD VSWNT++ GY+QN A + + E +K F
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 282 ---------------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
TA+V Y + G ++ AR +FD M E+N VSWN+MI YV
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 321 QTKRMDMARELFEAM-----------------TC----------------------KNVA 341
Q + A +F+ M C +NV+
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N++I+ Y + E+ A ++F ++ +SW A+I G+AQ+G D+L F +M+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ + + SV++ A L+ K +HG +++ + FV AL+ MY KCG++ A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + ++ V +WN MI GY HGFGK AL LFE M+ IKP+ +T + ++SACSH+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE G + FY M +Y + + HY MVDLLGRAGRL+EA + + MP +P +GA+
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGAC+++ AEKAAE +FE+ P++ G +VLL+N+Y A+ W V +VR+ M +G++
Sbjct: 614 LGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G S +E++N+VH+F G T HP+ +IYA+LE+L +K+ G+V T LVL V +
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVEND 732
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
KE +L HSEKLA+++G+L+ AG I V KNLRVC DCHNA K+IS + GR I++RD
Sbjct: 733 VKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDM 792
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHHF G+CSCGDYW
Sbjct: 793 QRFHHFKNGACSCGDYW 809
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/735 (35%), Positives = 413/735 (56%), Gaps = 35/735 (4%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMI 130
G AL VF+++ +SVS+ +++ + NG A + +M + D + V I
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAI 65
Query: 131 SGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
+K L + L M+ + D++ +++ YA+ + AR+ FD M +K
Sbjct: 66 GVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTL 125
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANW-------EVVSWNSLM-----GGFVKQKRLG 233
++WN L+A Y +NG A +++ + + ++++S + G + Q R
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREI 185
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
+A+ + D + N +I Y++ L A+++F+ +DV W M+SGY + G
Sbjct: 186 EARTVASGY-ASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA 244
Query: 294 VDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNT 345
+A +F M P+ N V++ ++ + ++ R + + S N
Sbjct: 245 ATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNV 304
Query: 346 MITGYAQ-SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++ Y + S + AR +F+RM D I+W +I Y Q G ++D+L +F +M+
Sbjct: 305 LLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAP 364
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N ++VLS CA L + GK +H + +A + N+L+ MY +CGS+++ F
Sbjct: 365 NEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVF 424
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
I DK ++SW+T+IA YA+HG + L F + G+ DD+TMV LSACSH G+++
Sbjct: 425 AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK 484
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + F SM D+G+ P+ +H+ CMVDLL RAGRL+ A+NL+ +MPF PDA W +LL
Sbjct: 485 EGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYV-LLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
C+L+ T+ A + A+ +FE+E E+ V LLSN+YA +GRW DV K R + R +K
Sbjct: 545 CKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR---RAARKN 601
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G S++E+ + VH F GD HPE++ I A ++ L ++K G+V ++VLH+V EEEK
Sbjct: 602 PGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEK 661
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E ML YHSEKLA+AYG++S P G P+ ++KNLR C DCH A K IS+IVGR I++RD+ R
Sbjct: 662 EQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTR 721
Query: 764 FHHFSGGSCSCGDYW 778
FHHF GSCSC DYW
Sbjct: 722 FHHFENGSCSCKDYW 736
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 218/453 (48%), Gaps = 31/453 (6%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-----MLFE----SKANW 214
Y + G A +F + N +SW ++AA+ +NG EA M+ E A +
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
V +KQ +L A + R+ D + +IT YA+ L A++ F+E
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-------NTVSWNAMIAGYVQTKRMDM 327
K + TW A+++GY +NG A I+ M K + +++++ + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 328 ARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
RE+ AS N +I Y++ G + AR +FDR+ D I+W +I+GYA+
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAK 241
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G + +L LF M + N F +L+ C NL LE G+ +H ++ + G+E+ +
Sbjct: 242 QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVI 301
Query: 444 GNALLVMYCKC-GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
GN LL MY KC S+EEA FE + +DVI+WN +I Y ++G KDAL +F+ M+
Sbjct: 302 GNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLEN 361
Query: 503 IKPDDITMVGILSACSHTGLVEKG--TEYFYSMNRDYG--VIPNSKHYTCMVDLLGRAGR 558
+ P++IT+ +LSAC+ G +G + R V+ NS ++++ R G
Sbjct: 362 VAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENS-----LMNMYNRCGS 416
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
LD+ + + + +W L+ A +G +
Sbjct: 417 LDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHS 448
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 65/404 (16%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
++DI IT + R + A F+ M +++ V++NA+I+GY NG A +++
Sbjct: 91 EFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQD 150
Query: 118 MPQR------------------------------------------DLVSWNVMISGYVR 135
M + D + N +I+ Y +
Sbjct: 151 MVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSK 210
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGL 191
SL +AR +F+ + RDV++WNTM+SGYA+ G A A +F RM + N +++ GL
Sbjct: 211 CGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGL 270
Query: 192 LAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVK-QKRLGDAKWIFDRMPVRD 246
L A +E+ + E ++V N L+ + K L +A+ +F+RM RD
Sbjct: 271 LTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRD 330
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVS-----GYVQNGKVDEA 297
++WN +I Y Q +A +F++ +++V T + ++S G + GK A
Sbjct: 331 VITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHA 390
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE-- 355
+I + + V N+++ Y + +D +F A+ K++ SW+T+I YAQ G
Sbjct: 391 -LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449
Query: 356 --ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+ H L D ++ + ++ + G ++ ++ F+ M
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSM 493
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G + A +F + + +SW I+A +A++G+ ++L + M G R + + F
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ C++ L+ G+ LH +++ E +G AL+ MY +C +E A F+E+
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTV---GIKPDDITMVGILSACSHTGLVEK 525
K +++WN +IAGY+R+G + AL +++ M + G+KPD IT L AC+ G + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E + G +S ++++ + G L+ A+ + + D W ++
Sbjct: 182 GRE-IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG- 238
Query: 586 RLYGKTELAEKAAEVIFEMEPEN 608
Y K A +A E+ M P +
Sbjct: 239 --YAKQGAATQALELFQRMGPND 259
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCGSV +A F I + +SW ++A +AR+G ++AL + M G++PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKN 568
V + CS + +++G + ++M + ++ + T ++ + R L+ A+
Sbjct: 61 FVVAIGVCSSSKDLKQG-QLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE--NAGMYVLLSNLYAASGRWG 626
M + TW AL+ G A K + + PE S LYA + G
Sbjct: 120 MG-KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACT-VVG 177
Query: 627 DVSKVR 632
D+S+ R
Sbjct: 178 DISQGR 183
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 275/818 (33%), Positives = 430/818 (52%), Gaps = 99/818 (12%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN------AMISGYLLNGQLDPA 111
D ++ W + + +G L+V+ M R+ VS N S LL Q+
Sbjct: 909 DHNVVSWTSLMVGYSDSGNPGEVLNVYQRM-RQEGVSGNQNTFATVTSSCGLLEDQV-LG 966
Query: 112 RQVFDQMPQ---RDLVS-WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
QV + Q D VS N +IS + S+ A +F+ M + D++SWN M+S YA +
Sbjct: 967 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 1026
Query: 168 GYADAARRIFDRM---------------------------------------LEKNEISW 188
G + R F M L+ N
Sbjct: 1027 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 1086
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PV 244
N LL Y + GR E+A ++F++ +++SWNS+M +V+ + D I + V
Sbjct: 1087 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 1146
Query: 245 RDEVSWNTMITGYAQNNYLAEAQ---RLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMI 300
+ V++ + + + L E++ L A D + A+V+ Y + G + EA+ +
Sbjct: 1147 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 1206
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS------------------ 342
MP+ + V+WNA+I G+ + + + A + ++ + K + +
Sbjct: 1207 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 1266
Query: 343 ----------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
N++IT YA+ G++ + +FD + I+W A++A
Sbjct: 1267 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 1326
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
A G E++L++F EM+ G L++ F+ L+ ANLA LE G+QLHG ++K+GFE+
Sbjct: 1327 NAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESD 1386
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
V NA + MY KCG + + + +++ +SWN +I+ +ARHG + A F M
Sbjct: 1387 LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLK 1446
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
+G KPD +T V +LSAC+H GLV++G Y+ SM R++GV P +H C++DLLGR+GRL
Sbjct: 1447 LGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLS 1506
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
A+ +K MP P+ W +LL ACR++G ELA K AE + E++P + YVL SN+ A
Sbjct: 1507 HAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCA 1566
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
SG+W DV +R +M +KK SW+++++KVH+F +G+ HP+ RI A L EL
Sbjct: 1567 TSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMK 1626
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
K+ G+V T LHD+ EE+KE+ L HSE+LA+A+G+++ P +R+ KNLRVC D
Sbjct: 1627 MTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGD 1686
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH+ K +S IVGR I+LRD RFHHFSGG CSCGDYW
Sbjct: 1687 CHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 268/508 (52%), Gaps = 79/508 (15%)
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----------- 274
+VK + A+ +FD MP R VSW M++GY+QN +A LF +
Sbjct: 75 YVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTY 134
Query: 275 ----------------------------VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
V+++F +A+V + + GK+++A +F M E
Sbjct: 135 GSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMME 194
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMT-------CKNVAS----------------- 342
++ VSWNAMI GY D + +F +M C + S
Sbjct: 195 RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQI 254
Query: 343 ---------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG-Y 386
+I YA++G + A++L M + D S A+I GYA G Y
Sbjct: 255 HGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIY 314
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
S D+L LF EM + ++ S+L+ CANLAS LG Q+H +K +GNA
Sbjct: 315 SVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNA 374
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY K G +E+A AF+E+ +K+VISW ++I+GYA+HG+G A+ L++ M++ G KP+
Sbjct: 375 LIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPN 434
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
D+T + +L ACSHTGL +G E F +M Y + P ++HY+CMVDL R G L+EA NL+
Sbjct: 435 DVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLL 494
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+ + +A+ WGA+LGA +YG L ++AA +F M+PEN+ YV+L+++Y+A+G W
Sbjct: 495 CKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWD 554
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
D K+R M +R KK GYS+ + K
Sbjct: 555 DAWKIRKLMEERSTKKNAGYSFFQATKK 582
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/689 (24%), Positives = 295/689 (42%), Gaps = 139/689 (20%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-- 118
I Q N I + + G + A +VF+ M R+ S++ M+SGY+ G + A +F QM
Sbjct: 779 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 838
Query: 119 ----PQRDLVSWNVMI---SGYVRNKSLSA------------------------------ 141
P +V+ + SGY+ ++
Sbjct: 839 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 898
Query: 142 -ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN-- 198
A+ LFE MP +VVSW +++ GY+ +G ++ RM ++ +S N A V +
Sbjct: 899 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG-VSGNQNTFATVTSSC 957
Query: 199 GRIEEACMLFESKANW-------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
G +E+ + ++ + V NSL+ F + +A ++FD M D +SWN
Sbjct: 958 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWN 1017
Query: 252 TMITGYAQNNYLAEAQRLFE-------------------EAPVKDVFTWTAMVSG----- 287
MI+ YA + E+ R F D W + G
Sbjct: 1018 AMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKL 1077
Query: 288 ---------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT-KRMDMAREL 331
Y + G+ ++A ++F AM E++ +SWN+M+A YVQ K +D + L
Sbjct: 1078 GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKIL 1137
Query: 332 FEAM----------------TCKN---------------VASW-------NTMITGYAQS 353
E + C N VA + N ++T Y +
Sbjct: 1138 AELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKL 1197
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + A+ + MPQ D ++W A+I G+A++ ++++ + ++ G N SVL
Sbjct: 1198 GMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVL 1257
Query: 414 STCANLASL-ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C+ L + G +H +V GFE+ +V N+L+ MY KCG + + + F+ + +K
Sbjct: 1258 GACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSP 1317
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
I+WN M+A A HG G++AL +F M+ VG+ D + G L+A ++ ++E+G + +
Sbjct: 1318 ITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LHG 1376
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ G + +D+ G+ G + + ++ P +W L+ A + +
Sbjct: 1377 LVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISA---FARHG 1432
Query: 593 LAEKAAEVIFEM-----EPENAGMYVLLS 616
+KA E EM +P++ LLS
Sbjct: 1433 CFQKARETFHEMLKLGPKPDHVTFVSLLS 1461
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 217/474 (45%), Gaps = 89/474 (18%)
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-- 270
N + N+L+ + K + A+++FD M R+E SW+TM++GY + EA LF
Sbjct: 776 NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 835
Query: 271 --------------------------------------EEAPVKDVFTWTAMVSGYVQNG 292
+ + DV+ TA+V Y G
Sbjct: 836 MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 895
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----------------- 335
V A+ +F+ MP+ N VSW +++ GY + +++ M
Sbjct: 896 LVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTS 955
Query: 336 TC----------------------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+C +V+ N++I+ ++ + A +FD M + D IS
Sbjct: 956 SCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIIS 1015
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I+ YA G +SLR F M+ N + +S+LS C+++ +L+ G+ +HG +V
Sbjct: 1016 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 1075
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K+G ++ + N LL +Y + G E+A F+ + ++D+ISWN+M+A Y + G D L
Sbjct: 1076 KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 1135
Query: 494 LFESMKTVGIKPDDITMVGILSACSHT-GLVEKGTEY---FYSMNRDYGVIPNSKHYTCM 549
+ + +G + +T L+ACS+ L+E + + D+ ++ N+ +
Sbjct: 1136 ILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA-----L 1190
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
V + G+ G + EA+ +++ MP +PD TW AL+G + A KA ++I E
Sbjct: 1191 VTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 142/272 (52%), Gaps = 16/272 (5%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I Y + G++ ARN+FD MP+ +SW A+++GY+Q+G E + LF +M+ G + N
Sbjct: 71 LIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN 130
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+ + S L C +L L++G Q+ G + K F FV +AL+ + KCG +E+A + F
Sbjct: 131 QFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFG 190
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
++++DV+SWN MI GYA GF D+ +F SM G+ PD T+ +L A + G
Sbjct: 191 TMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGG---- 246
Query: 526 GTEYFYSMNRDYGVIPNSKH--YTCMVDLL----GRAGRLDEAQNLMKNMPFEPDAATWG 579
N+ +G+I + Y + LL + G L A++L K M + D +
Sbjct: 247 ---GLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM-LKKDLFSST 302
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
AL+ G + A ++ EM N GM
Sbjct: 303 ALITGYAHEGIYSV--DALDLFKEMNQMNIGM 332
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 133/551 (24%), Positives = 237/551 (43%), Gaps = 93/551 (16%)
Query: 7 LRQLHSSCILHQHTQSINRLQS-PANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWN 65
++ S+C L + +++ L S P +P K L+ ++ K++ +
Sbjct: 2 FSKIQSACNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGH----------- 50
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS 125
I TH+ S LH+ +I Y+ G + AR VFD MP+R +VS
Sbjct: 51 -LIHTHLITNGFGSDLHL-----------NTKLIIFYVKVGDVIAARNVFDGMPERSVVS 98
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE--- 182
W M+SGY +N A LF M + V N G A A + R D ++
Sbjct: 99 WTAMVSGYSQNGRFEKAFVLFSDM-RHCGVKANQFTYGSALR--ACTSLRCLDMGIQVQG 155
Query: 183 --------KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
+N + L+ + + G++E+A LF + +VVSWN+++GG+ Q D
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215
Query: 235 AKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP-----VKDVFTWTAMV 285
+ +F M V D + +++ A+ L A ++ D+ T ++
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT-GLLI 274
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM-ARELFEAMT-------- 336
+ Y +NG + A+ + M +K+ S A+I GY + A +LF+ M
Sbjct: 275 NAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDD 334
Query: 337 ---------CKNVASW----------------------NTMITGYAQSGEITHARNLFDR 365
C N+AS+ N +I YA+SGEI A+ FD
Sbjct: 335 VILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDE 394
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
M + + ISW ++I+GYA+ GY ++ L+ +M+ G + N F S+L C++ G
Sbjct: 395 MEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG 454
Query: 426 KQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYA 483
+ +V K + + ++ ++ + G +EEAY+ +I + + W ++ +
Sbjct: 455 CECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASS 514
Query: 484 RHGF---GKDA 491
+G+ GK+A
Sbjct: 515 IYGYMSLGKEA 525
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 2/187 (1%)
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
RL+ S + +L C + + + G +H L+ GF + + L++ Y K G V A +
Sbjct: 27 RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ + ++ V+SW M++GY+++G + A +LF M+ G+K + T L AC+
Sbjct: 87 VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRC 146
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
++ G + + + + N + +VD + G++++A L M E D +W A++
Sbjct: 147 LDMGIQVQGCIQKGR-FVENLFVKSALVDFHSKCGKMEDASYLFGTM-MERDVVSWNAMI 204
Query: 583 GACRLYG 589
G + G
Sbjct: 205 GGYAVQG 211
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
Query: 389 DSLRLFIEMKR--YGER-LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
D ++F++ + YG R LN F L + + S GK LH + G F N
Sbjct: 726 DIAKVFLQQQHTDYGIRCLNAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTN 783
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
L+ MY K G++E A + F+E+ ++ SW+TM++GY R G ++A+ LF M +G++P
Sbjct: 784 TLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEP 843
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ + +++ACS +G + + G++ + T +V G G + AQ L
Sbjct: 844 NGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKL 903
Query: 566 MKNMPFEPDAATWGALL 582
+ MP + + +W +L+
Sbjct: 904 FEEMP-DHNVVSWTSLM 919
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P D+ N +I Y ++ + A+ F+ M +++V+SW +++SGYA++GY A ++
Sbjct: 365 PSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYK 424
Query: 179 RMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQ 229
+M K N++++ LL A G E C F + N + ++ ++ F +Q
Sbjct: 425 KMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQ 484
Query: 230 KRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLA----EAQRLFEEAPVKDVFTWTAM 284
L +A + ++ ++ S W ++ + Y++ A LF P V + +
Sbjct: 485 GLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSV-NYVVL 543
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
S Y G D+A I M E++T NA + + TK+
Sbjct: 544 ASIYSAAGLWDDAWKIRKLMEERSTKK-NAGYSFFQATKK 582
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/656 (38%), Positives = 387/656 (58%), Gaps = 22/656 (3%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L+ A ++F+ + + +++ WNTM G+A + +A ++ M L N ++ LL A
Sbjct: 53 LTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKA 112
Query: 195 YVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
++ E + + + ++ SL+ +VK R DA+ +FD+ RD VS+
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSY 172
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------ 304
+I GYA N Y+ AQ++F+E PVKDV +W A++SGY + G EA +F M
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHAR 360
P+++T+ +++ Q+ +++ R++ + N+ N +I Y + GE+ A
Sbjct: 233 PDESTMV--TVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAS 290
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LF+ + D ISW +I GY +++L LF EM R GE N S+L CA+L
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG 350
Query: 421 SLELGKQLHGQLVK--VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
++++G+ +H + K G + +L+ MY KCG +E A F+ ++++ + SWN M
Sbjct: 351 AIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I G+A HG A +F M+ GI+PDDIT VG+LSACSH+G+++ G F SM DY
Sbjct: 411 IFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYK 470
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P +HY CM+DLLG +G EA+ ++ +M +PD W +LL AC+++G EL E A
Sbjct: 471 ITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFA 530
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + ++EP+N+G YVLLSN+YA +GRW +V+K R + D+G+KKV G S +E+ + VH F
Sbjct: 531 QNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEF 590
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
+GD LHP IY LEE+E L++ GFV T VL ++ EE KE LR+HSEKLA+A+
Sbjct: 591 IIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 650
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
G++S G + ++KNLRVC +CH A K ISKI R II RD RFHHF G CSC
Sbjct: 651 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 227/516 (43%), Gaps = 101/516 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I H+ CD L+V + ++I+ Y+ NG+ + AR+VFDQ RD+VS+
Sbjct: 125 IHGHVLKLGCDLDLYV-----------HTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYT 173
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN--- 184
+I GY N + +A+ +F+ +P +DVVSWN ++SGYA+ G A +F M++ N
Sbjct: 174 ALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKP 233
Query: 185 -EISWNGLLAAYVQNGRIEEACMLFE------SKANWEVVSWNSLMGGFVKQKRLGDAKW 237
E + +L+A Q+ IE + +N ++V N+L+ ++K + A
Sbjct: 234 DESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIV--NALIDLYIKCGEVETASG 291
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGK 293
+F+ + +D +SWNT+I GY N EA LF+E + T +++ G
Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGA 351
Query: 294 VDEARMIFDAMPEK-----NTVSW-NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
+D R I + ++ N S ++I Y + ++ A+++F++M ++++SWN MI
Sbjct: 352 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMI 411
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
G+A G A ++F RM + G D +
Sbjct: 412 FGFAMHGRANPAFDIFSRM---------------RKDGIEPDDI---------------- 440
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F +LS C++ L+LG+ + S+ E Y
Sbjct: 441 TFVGLLSACSHSGMLDLGRHIF-------------------------RSMTEDYK----- 470
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+ + + MI G K+A + SM+ + PD + +L AC G VE G
Sbjct: 471 ITPKLEHYGCMIDLLGHSGLFKEAEEMINSME---MDPDGVIWCSLLKACKMHGNVELGE 527
Query: 528 EYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEA 562
+ ++ + + P NS Y + ++ AGR +E
Sbjct: 528 SFAQNLIK---IEPKNSGSYVLLSNIYATAGRWNEV 560
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 195/414 (47%), Gaps = 40/414 (9%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ I +++NG + A VF+ R VSY A+I GY NG + A++
Sbjct: 131 KLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQK 190
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMP---KRDVVSWNTMLSGYAQNGY 169
+FD++P +D+VSWN +ISGY + A LF EMM K D + T+LS AQ+
Sbjct: 191 MFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSAS 250
Query: 170 ADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ R++ D N N L+ Y++ G +E A LFE + +V+SWN+L+GG
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGG 310
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWN--TMITGYAQNNYLAEAQ-----RLFEEAPVKDV 278
+ +A +F M +R S N TM++ +L ++ + +K V
Sbjct: 311 YTHMNLYKEALLLFQEM-LRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 369
Query: 279 FT----WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
T+++ Y + G ++ A+ +FD+M ++ SWNAMI G+ R + A ++F
Sbjct: 370 SNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSR 429
Query: 335 MTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSG 385
M + ++ +++ + SG + R++F M + I+ + +I SG
Sbjct: 430 MRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSG 489
Query: 386 YSEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C ++ELG+ L+K+
Sbjct: 490 -------LFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKI 536
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 268/716 (37%), Positives = 392/716 (54%), Gaps = 60/716 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQR---DLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
NA++S Y G L A +FD + R DLVSWN ++S Y+ + A LF M R
Sbjct: 298 NAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTR 357
Query: 153 -----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
DV+S +L A + R++ +++G +++
Sbjct: 358 HLMSPDVISLVNILPACASLAASLRGRQVH---------------GFSIRSGLVDD---- 398
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
V N+++ + K ++ +A +F RM +D VSWN M+TGY+Q L A
Sbjct: 399 --------VFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHAL 450
Query: 268 RLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVSWNAMIAGY 319
LFE + DV TWTA+++GY Q G+ EA +F D N V+ ++++
Sbjct: 451 SLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSAC 510
Query: 320 VQTKRMDMARELF------------EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
V + +E ++ N +I YA+ AR +FD +
Sbjct: 511 VSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVS 570
Query: 368 --QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLE 423
D ++W +I GYAQ G + ++L+LF M + + + + FT L CA LA+L
Sbjct: 571 PKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALR 630
Query: 424 LGKQLHGQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G+Q+H +++ + FV N L+ MY K G V+ A F+ + ++ +SW +++ GY
Sbjct: 631 FGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGY 690
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
HG G+DAL +F+ M+ V + PD IT + +L ACSH+G+V+ G +F M++D+GV P
Sbjct: 691 GMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPG 750
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVDL GRAGRL EA L+ MP EP W ALL ACRL+ EL E AA +
Sbjct: 751 PEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLL 810
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+E N G Y LLSN+YA + RW DV+++R M+ G+KK G SW++ + V TF VGD
Sbjct: 811 ELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGD 870
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP+ +IY L +L ++K G+V T LHDV +EEK +L HSEKLA+AYGIL+
Sbjct: 871 RSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILT 930
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ PIR+ KNLR+C DCH+AI +ISKI+ IILRD++RFHHF GSCSC YW
Sbjct: 931 LHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 222/492 (45%), Gaps = 52/492 (10%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA----- 111
G D+ WN ++ +M ++AL +F+ M R +S + + +L A
Sbjct: 324 GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRG 383
Query: 112 RQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
RQV + LV N ++ Y + + A +F+ M +DVVSWN M++GY+Q
Sbjct: 384 RQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQA 443
Query: 168 GYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSW 219
G + A +F+RM E+N ++W ++ Y Q G+ EA +F + VV+
Sbjct: 444 GRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTL 503
Query: 220 NSLMGGFV--------KQKRLGDAKWIFD---RMPVRDEVS-WNTMITGYAQNNYLAEAQ 267
SL+ V K+ K+I + P D++ N +I YA+ A+
Sbjct: 504 VSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVAR 563
Query: 268 RLFEEAPVK--DVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGY 319
++F+ K DV TWT M+ GY Q+G + A +F M + N + + +
Sbjct: 564 KMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVAC 623
Query: 320 VQTKRMDMARELFEAMTCKN------VASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+ + R++ A +N + N +I Y++SG++ A+ +FD MPQ + +S
Sbjct: 624 ARLAALRFGRQV-HAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVS 682
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +++ GY G ED+LR+F EM++ + F VL C++ ++ G ++
Sbjct: 683 WTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMS 742
Query: 434 K-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG----- 486
K G + G ++ ++ + G + EA E+ ++ + W +++ H
Sbjct: 743 KDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELG 802
Query: 487 -FGKDALMLFES 497
F + L+ ES
Sbjct: 803 EFAANRLLELES 814
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 180/415 (43%), Gaps = 67/415 (16%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVK--DVFTWTAMVSGYVQNGKVDEARMIFDAM------ 304
+I Y +N A A L E P VF W ++ + G + ++ M
Sbjct: 197 LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWT 256
Query: 305 PEKNTVSW------NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
P+ T + N + ++R F + NV N +++ Y + G + H
Sbjct: 257 PDHYTFPFVFKACANLSSLSLGASLHATVSRSGFAS----NVFVCNAVVSMYGKCGALRH 312
Query: 359 ARNLFDRMPQ---HDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLS 414
A N+FD + D +SW ++++ Y + + +L LF +M R+ + ++L
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILP 372
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA+LA+ G+Q+HG ++ G FVGNA++ MY KCG +EEA F+ + KDV+S
Sbjct: 373 ACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVS 432
Query: 475 WNTM-----------------------------------IAGYARHGFGKDALMLFESMK 499
WN M I GYA+ G G +AL +F M
Sbjct: 433 WNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMC 492
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYF-----YSMNRDYGVIPNS---KHYTCMVD 551
G +P+ +T+V +LSAC G + G E + +N D G P + K ++D
Sbjct: 493 DCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLD-GPDPGADDLKVINGLID 551
Query: 552 LLGRAGRLDEAQNLMKNM-PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ + + A+ + ++ P + D TW ++G +G A + +F+M+
Sbjct: 552 MYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMD 606
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 164/353 (46%), Gaps = 26/353 (7%)
Query: 346 MITGYAQSGEITHARNLFDRMPQH--DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+I Y S +A L +R+P W +I G D L+ +MK G
Sbjct: 197 LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWT 256
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ F V CANL+SL LG LH + + GF + FV NA++ MY KCG++ A++
Sbjct: 257 PDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNM 316
Query: 464 FEEIVDK---DVISWNTMIAGYARHGFGKDALMLFESMKTVGI-KPDDITMVGILSACSH 519
F+++ + D++SWN++++ Y AL LF M T + PD I++V IL AC+
Sbjct: 317 FDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACAS 376
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+G + + + G++ + +VD+ + G+++EA + + M F+ D +W
Sbjct: 377 LAASLRGRQ-VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFK-DVVSWN 434
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL----LSNLYAASGRWGDVSKVRLKM 635
A++ Y + E A + M EN + V+ + YA G+ + V +M
Sbjct: 435 AMVTG---YSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQM 491
Query: 636 RDRGVKK--VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
D G + VT S L SVG LH ++ YA ++F L DG
Sbjct: 492 CDCGSRPNVVTLVSLLSA-----CVSVGALLHGKETHCYA----IKFILNLDG 535
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/602 (38%), Positives = 364/602 (60%), Gaps = 34/602 (5%)
Query: 107 QLDPARQVFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLS 162
+L AR + D+MP R + V W ++S + +N + AR LFE+MP+R+VV++N MLS
Sbjct: 56 RLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLS 115
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
GY Q G A R F+ M E+N +SW LL GRI EA LF VVSWNS+
Sbjct: 116 GYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVSWNSM 175
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ G ++ +L +A+ +F+ MPV+ +VSWN MI GYA+++ + EA+ LF+ ++V TWT
Sbjct: 176 LVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNVVTWT 235
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSW---------------------------NAM 315
+M+SGY + G V E +F MPE+N VSW N+M
Sbjct: 236 SMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALNSMSYNTQSCNSM 295
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
I GY++ +++ A+ LF+ + ++ SW +MI GY G+I A LF+ MP D ++W
Sbjct: 296 INGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWT 355
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+++G+ Q+ ++ LF EM+ G S F+ +L +A L+ G+Q H L+K
Sbjct: 356 VMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKT 415
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
FE + N+L+ MY KCG + +AY F +++ +D+ISWN+MI G++ HG +AL +F
Sbjct: 416 QFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVF 475
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
E+M T G P+ +T +GILSACSH GL+ +G E F +M+ + + P +HY CMV+LLGR
Sbjct: 476 EAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGR 535
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG--KTELAEKAAEVIFEMEPENAGMYV 613
AG+++EA+ + +PFEPD WGALLG C +G T +A +AA+ + E++P NA +V
Sbjct: 536 AGKVEEAEEFISKLPFEPDLTIWGALLGVCG-FGMINTGVARRAAKRLLELDPLNAPAHV 594
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
+L N++A+ G+ + ++R +M +GV+KV G SW+ ++ + + F GD +HP+ D + +
Sbjct: 595 VLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDRIHPQADEMLS 654
Query: 674 YL 675
L
Sbjct: 655 LL 656
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 249/489 (50%), Gaps = 76/489 (15%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W ++ +NG D A +F MP R+ V+YNAM+SGY+ G+L A + F++MP+R++
Sbjct: 79 WTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNV 138
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
VSW ++ G + AR LF +MP+R+VVSWN+ML G ++G + ARR+F+ M K
Sbjct: 139 VSWTSLLCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVK 198
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+++SWN ++A Y ++ R+EEA +LF+ + VV+W S++ G+ + + + +F +MP
Sbjct: 199 SQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMP 258
Query: 244 VRDEVSWNTMITGYAQNNY---------------------------LAEAQRLFEEAPVK 276
R+ VSW MI G+A N + L +AQ LF+ PV+
Sbjct: 259 ERNVVSWTAMIGGFAWNGFYKEALNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVR 318
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D +WT+M++GY G++ +A +F+ MP+++ V+W M++G+VQ + A LF M
Sbjct: 319 DKISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMR 378
Query: 337 CKNVASW---------------------------------------NTMITGYAQSGEIT 357
K V+ N++I+ YA+ GEI
Sbjct: 379 VKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIG 438
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A ++F +M D ISW ++I G++ G + ++L++F M G N F +LS C+
Sbjct: 439 DAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACS 498
Query: 418 NLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-----D 471
+ L G +L + V + ++ + + G VEEA EE + K D
Sbjct: 499 HAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEA----EEFISKLPFEPD 554
Query: 472 VISWNTMIA 480
+ W ++
Sbjct: 555 LTIWGALLG 563
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 202/398 (50%), Gaps = 65/398 (16%)
Query: 227 VKQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ Q+RL +A+ + D MP R V W ++++ +++N ++ EA+ LFE P ++V T+
Sbjct: 52 LSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYN 111
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
AM+SGYVQ G++ +A F+ MPE+N VSW +++ G R+ ARELF M +NV S
Sbjct: 112 AMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVS 171
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN+M+ G +SG++ AR +F+ MP +SW +IAGYA+ E++ LF M G+
Sbjct: 172 WNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGM---GD 228
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
R N +TS++S YC+ G+V+E Y
Sbjct: 229 R-NVVTWTSMISG-----------------------------------YCRAGNVQEGYC 252
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+++ +++V+SW MI G+A +GF K+AL SM + + +++ G
Sbjct: 253 LFQKMPERNVVSWTAMIGGFAWNGFYKEAL---NSMSY-----NTQSCNSMINGYIRIGQ 304
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+EK F D + + +T M++ G++ +A L NMP + DA W ++
Sbjct: 305 LEKAQSLF-----DTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMP-DRDAVAWTVMV 358
Query: 583 GACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLL 615
+ + EL +A + EM P N+ +LL
Sbjct: 359 SG---HVQNELFAEATYLFSEMRVKGVSPLNSTFSILL 393
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 170/387 (43%), Gaps = 74/387 (19%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN----------- 105
GD ++ W I+ + R G +F MP R+ VS+ AMI G+ N
Sbjct: 227 GDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALNSMS 286
Query: 106 ----------------GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
GQL+ A+ +FD +P RD +SW MI+GY ++ A LF M
Sbjct: 287 YNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNM 346
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA---------AYVQNGR 200
P RD V+W M+SG+ QN A +F M K N + AY+ GR
Sbjct: 347 PDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGR 406
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ C+L +++ ++++ NSL+ + K +GDA IF +M RD +SWN+MI G++ +
Sbjct: 407 -QFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHH 465
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
+EA ++FE + SG N+V++ +++
Sbjct: 466 GLTSEALKVFE----------AMLTSG-----------------THPNSVTFLGILSACS 498
Query: 321 QTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISW 374
++ ELF+AM+ + + M+ ++G++ A ++P + D W
Sbjct: 499 HAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIW 558
Query: 375 AAIIA----GYAQSGYSEDSLRLFIEM 397
A++ G +G + + + +E+
Sbjct: 559 GALLGVCGFGMINTGVARRAAKRLLEL 585
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/723 (34%), Positives = 406/723 (56%), Gaps = 22/723 (3%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGY 133
+ A VFN+M R ++S+N++I+ NG+ + + F M P+ D ++ + ++
Sbjct: 403 EEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPAC 462
Query: 134 VRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ L R L ++ K +V N++LS YAQ G ++ A +F M ++ ISWN
Sbjct: 463 GSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWN 522
Query: 190 GLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A++V++G+ A +L +++ V++ + + ++L V
Sbjct: 523 SMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVH 582
Query: 246 -DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+ + NT++T Y + + EAQ++ + P +DV TW A++ G+ + + F+ M
Sbjct: 583 HNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLM 642
Query: 305 PEKNTVS---------WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE 355
+ +S M Y+ M + + A + +++IT YAQ G+
Sbjct: 643 RREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGD 702
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ + +FD + + +W AI + A G E++L+ M+ G L++ F+ L+T
Sbjct: 703 LNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALAT 762
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
NL L+ G+QLH ++K+GFE +V NA + MY KCG +++ + + SW
Sbjct: 763 IGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSW 822
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N +I+ ARHGF + A F M +G+KPD +T V +LSACSH GLV++G YF SM
Sbjct: 823 NILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTS 882
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
++GV +H C++DLLGR+GRL EA+ + MP P+ W +LL AC+++G EL
Sbjct: 883 EFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGR 942
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
KAA+ +FE+ + YVL SN+ A++ RWGDV VR +M + +KK SW++++NKV
Sbjct: 943 KAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKV 1002
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
TF +GD HP+ +IYA LEEL +++G + T L D EE+KEH L HSE++A
Sbjct: 1003 MTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIA 1062
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+A+G+++ G P+R+ KNLRVC DCH+ K +SKIVGR I++RD+ RFHHF GG CSC
Sbjct: 1063 LAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCS 1122
Query: 776 DYW 778
DYW
Sbjct: 1123 DYW 1125
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/560 (23%), Positives = 254/560 (45%), Gaps = 34/560 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + G A HVF+ M R+ S+N MISG++ G A Q F M + +
Sbjct: 186 NTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVT 245
Query: 125 SWNVMISGYV----RNKSLS-AARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARR 175
+ +I+ V R+ ++ AR + + K +V ++L Y +G A +
Sbjct: 246 PSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANK 305
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ------ 229
+F+ + E N +SW L+ Y NG +E ++ + ++ + M ++
Sbjct: 306 LFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGD 365
Query: 230 -----KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
+ LGD I + N++I+ + + + EA R+F +D +W ++
Sbjct: 366 KTMGYQILGDV--IKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSI 423
Query: 285 VSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC--- 337
++ NG+ +E+ F M P+ + ++ +A++ + + R L +T
Sbjct: 424 ITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGL 483
Query: 338 -KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
NV N++++ YAQ+G A +F MP D ISW +++A + + G ++ L +E
Sbjct: 484 ESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVE 543
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M + + +N FT+ LS C NL L++ +H ++ +GN L+ MY K G
Sbjct: 544 MLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGL 600
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
++EA + + ++DV++WN +I G+A + F M+ G+ + IT+V +L
Sbjct: 601 MDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGT 660
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C + K ++ G ++ + ++ + + G L+ + + + +++
Sbjct: 661 CMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLA-NKNSS 719
Query: 577 TWGALLGACRLYGKTELAEK 596
TW A+ A YG E A K
Sbjct: 720 TWNAIFSANAHYGPGEEALK 739
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 222/474 (46%), Gaps = 36/474 (7%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
Q++ N +++ Y + S+ A+++F+ M R+ SWN M+SG+ + G+ A + F
Sbjct: 179 QQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCH 238
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M E N ++ + + A + CM ++ + G+V + L ++
Sbjct: 239 MFE-NGVTPSSYVIASMVTACDRSGCMTEGARQ----------IHGYVVKCGLMSNVFV- 286
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+++ Y + ++EA +LFEE ++ +WT+++ Y NG E
Sbjct: 287 ----------GTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLN 336
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRM----DMARELF-----EAMTCKNVASWNTMITGY 350
I+ + + +A ++T M M ++ + +V+ N++I+ +
Sbjct: 337 IYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMF 396
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ A +F+ M + D ISW +II A +G E+SL F M+R + + +
Sbjct: 397 GNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITIS 456
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
++L C + L+ G+ LHG + K G E+ V N+LL MY + GS E+A F + +
Sbjct: 457 ALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR 516
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D+ISWN+M+A + G A++L M + +T LSAC + +EK +
Sbjct: 517 DLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEK-LKIV 572
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
++ + V N +V + G+ G +DEAQ + K MP E D TW AL+G
Sbjct: 573 HAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIGG 625
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 9/295 (3%)
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N NT++ Y++ G I +A+++FD+M + SW +I+G+ + G+ +++ F M
Sbjct: 180 QNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHM 239
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
G + S+++ C + G +Q+HG +VK G + FVG +LL Y GS
Sbjct: 240 FENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGS 299
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
V EA FEEI + +++SW +++ YA +G K+ L ++ ++ G+ TM ++
Sbjct: 300 VSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRT 359
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C G G + + + + ++ + G ++EA + NM E D
Sbjct: 360 CGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQ-ERDTI 418
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG-----RWG 626
+W +++ A G+ E E + Y+ +S L A G +WG
Sbjct: 419 SWNSIITASAHNGRFE--ESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWG 471
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
+GK LH VK + F N L+ MY K GS++ A H F+++ D++ SWN MI+G+
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
R G+ A+ F M G+ P + +++AC +G + +G + G++ N
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
T ++ G G + EA L + + EP+ +W +L+
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 163/410 (39%), Gaps = 40/410 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN I H + ++ + FN M RR + N + LL + P + MP
Sbjct: 615 DVVTWNALIGGHADDKDPNATIQAFNLM-RREGLLSNYITIVNLLGTCMSPDYLLKHGMP 673
Query: 120 ----------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ D + +I+ Y + L+ + +F+++ ++ +WN + S A G
Sbjct: 674 IHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGP 733
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE--SKANWEVVSW--NS 221
+ A + RM ++ ++ S++ LA ++E L K +E+ + N+
Sbjct: 734 GEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNA 793
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKD 277
M + K + D I +R + SWN +I+ A++ + +A F E D
Sbjct: 794 TMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPD 853
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMIAGYVQTKRMDMARELF 332
T+ +++S G VDE + F +M + V +I ++ R+ A
Sbjct: 854 HVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFI 913
Query: 333 EAMTC-KNVASWNTMITGYAQSGEITHARNLFDRMPQHDC------ISWAAIIAGYAQSG 385
+ M N W +++ G + R DR+ + + + ++ + A + G
Sbjct: 914 DKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWG 973
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
E+ + + + L + P S + + + +G Q H Q ++
Sbjct: 974 DVEN-----VRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQI 1018
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/722 (34%), Positives = 391/722 (54%), Gaps = 85/722 (11%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG-- 199
AR++F + + DV +N ++ G++ N ++ +F + + ++ N A+ +
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 200 --RIEEACMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
R + A + +A + E++ ++++ + K R+ DA+ +FDRMP +D + WNT
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 253 MITGYAQNNYLAEAQRLFEE---------------------APVKDV------------- 278
MI+GY +N E+ ++F + A ++++
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 279 ------FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
+ T +S Y + GK+ +F + + V++NAMI GY +++ LF
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 333 EAMTCKNV-----------------------------------ASWNTMITG-YAQSGEI 356
+ + AS +T +T Y++ EI
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD P+ SW A+I+GY Q+G +ED++ LF EM++ N T +LS C
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A L +L LGK +H + FE+ +V AL+ MY KCGS+ EA F+ + K+ ++WN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
TMI+GY HG G++AL +F M GI P +T + +L ACSH GLV++G E F SM
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
YG P+ KHY CMVD+LGRAG L A ++ M EP ++ W LLGACR++ T LA
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
+E +FE++P+N G +VLLSN+++A + + VR + R + K GY+ +E+ H
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
F+ GD HP+ IY LE+LE K+++ G+ T+L LHDV EEE+E M++ HSE+LA+
Sbjct: 671 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+G+++ G IR++KNLRVC DCH K ISKI R+I++RD NRFHHF G CSCGD
Sbjct: 731 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 790
Query: 777 YW 778
YW
Sbjct: 791 YW 792
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 122/563 (21%), Positives = 214/563 (38%), Gaps = 165/563 (29%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY- 164
G + AR +F + + D+ +NV++ G+ N+S ++ ++F + K + N+ +
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 165 --AQNGYAD-------------------------------------AARRIFDRMLEKNE 185
A +G+ D AR++FDRM EK+
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 186 ISWNGLLAAYVQN-----------GRIEEACMLFESKANWEVV----------------- 217
I WN +++ Y +N I E+C ++ +++
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 218 --------SWNSLMGGFVK------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
S + ++ GF+ + ++G A + R P D V++N MI GY N
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKP--DIVAYNAMIHGYTSNGET 303
Query: 264 AEAQRLFEE----------------APV---------------KDVF-----TWTAMVSG 287
+ LF+E PV K F TA+ +
Sbjct: 304 ELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTV 363
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------ 335
Y + +++ AR +FD PEK+ SWNAMI+GY Q + A LF M
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 336 TC----------KNVASW-----------------NTMITGYAQSGEITHARNLFDRMPQ 368
TC ++ W +I YA+ G I AR LFD M +
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ ++W +I+GY G +++L +F EM G F VL C++ ++ G ++
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 429 HGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++ + GFE ++ + + G ++ A E + ++ W T++ H
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH- 602
Query: 487 FGKDA-LMLFESMKTVGIKPDDI 508
KD L S K + PD++
Sbjct: 603 --KDTNLARTVSEKLFELDPDNV 623
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 130/330 (39%), Gaps = 92/330 (27%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF-----------------DQMP- 119
+ A VF+ MP + ++ +N MISGY N + QVF D +P
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 120 ------------------QRDLVSWNVMISGYVRNKS----LSAARNLFEMMPKRDVVSW 157
+ S + +++G++ S + LF K D+V++
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAY 290
Query: 158 NTMLSGYAQNGYADAARRIF-DRMLEKNEISWNGLLAAYVQNGR------IEEACMLFES 210
N M+ GY NG + + +F + ML + + L++ +G I C+
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCL---- 346
Query: 211 KANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
K+N+ +L + K + A+ +FD P + SWN MI+GY QN +A
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 269 LFEEA--------PV-------------------------------KDVFTWTAMVSGYV 289
LF E PV ++ TA++ Y
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+ G + EAR +FD M +KN V+WN MI+GY
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGY 496
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 49/276 (17%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL----VSWNVMISGY 133
+SA +F+ P +S S+NAMISGY NG + A +F +M + + V+ ++S
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 134 VRNKSLSAARNLFEMMPKRDVVS---WNTMLSG-YAQNGYADAARRIFDRMLEKNEISWN 189
+ +LS + + +++ D S +T L G YA+ G ARR+FD M +KNE++WN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 190 GLLAAYVQNGRIEEACMLF---------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+++ Y +G+ +EA +F + + V + G VK+
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG---------- 540
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
DE+ +N+MI Y FE + V + MV + G + A
Sbjct: 541 -----DEI-FNSMIHRYG-----------FEPS----VKHYACMVDILGRAGHLQRALQF 579
Query: 301 FDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+AM E + W ++ K ++AR + E +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKL 615
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 43 RHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAM 98
R L +S K P+ WN I+ + +NG + A+ +F M + + V+ +
Sbjct: 374 RKLFDESPEKSLPS-------WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+S G L + V D + D S +I Y + S++ AR LF++M K++
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFES 210
V+WNTM+SGY +G A IF ML +++ +L A G ++E +F S
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/736 (37%), Positives = 414/736 (56%), Gaps = 64/736 (8%)
Query: 71 HMRNGCCDSALHVFNSMPRRS--SVSYNAMISGYLL-----NGQLDPARQVFDQMPQRDL 123
+ ++ DSAL F+ M S V YN YLL N L +++ +
Sbjct: 5 YAKSSSLDSALSFFSRMKHDSVRPVVYNFT---YLLKLCGDNSDLKRGKEIHGSVITSGF 61
Query: 124 VSWNV-----MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
SWN+ +++ Y + + ++ A N+F+ MP+RD+V WNTM+SGYAQNG+A A +
Sbjct: 62 -SWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 179 RMLEK----NEISWNGLLAAYVQNG--RIEEACMLFESKANWE--VVSWNSLMGGFVKQK 230
RM E+ + I+ +L A RI A + +A +E V +L+ + K
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
+ A+ IFD M R VSWN+MI GY Q+ A +F++ + V V G +
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 291 N----GKVDEARMI---FDAMPEKNTVS-WNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G ++ + + D + + VS N++I+ Y + KR+D+A ++F+ + K + S
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN MI GYAQ+G C++ ++L F EM+
Sbjct: 301 WNAMILGYAQNG----------------CVN---------------EALNAFCEMQSRNI 329
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ + SV+ A L+ K +HG +++ + FV AL+ MY KCG++ A
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ + + VI+WN MI GY HG GK ++ LF+ MK IKP+DIT + LSACSH+GL
Sbjct: 390 LFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGL 449
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
VE+G +F SM +DYG+ P HY MVDLLGRAGRL++A + ++ MP +P +GA+L
Sbjct: 450 VEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAML 509
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
GAC+++ +L EKAA IF++ P++ G +VLL+N+YA + WG V+KVR M G++K
Sbjct: 510 GACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQK 569
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G S +E+ N+VH+F G T HP+ +IY+YLE L +++ G+V T + HDV ++
Sbjct: 570 TPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDDV 628
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
K +L HSEKLA+A+G+L+ G PI + KNLRVC DCHNA K+IS + GR II+RD +
Sbjct: 629 KVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 688
Query: 763 RFHHFSGGSCSCGDYW 778
RFH F G CSCGDYW
Sbjct: 689 RFHLFKDGVCSCGDYW 704
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 177/403 (43%), Gaps = 60/403 (14%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
W++ + + + + A ++F+ MP R V +N MISGY NG A + +M
Sbjct: 63 WNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRM 122
Query: 119 PQRD-------------------LVSWNVMISGYV--------------------RNKSL 139
+ L+ + + GYV + S+
Sbjct: 123 SEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSV 182
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAY 195
S AR +F+ M R VVSWN+M+ GY Q+G A+ A IF +ML++ ++ G L A
Sbjct: 183 SIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHAC 242
Query: 196 VQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
G +E + + K + +V NSL+ + K KR+ A IF + + VSWN
Sbjct: 243 ADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWN 302
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEAR----MIFDA 303
MI GYAQN + EA F E + D FT +++ + +A+ ++
Sbjct: 303 AMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRR 362
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
+KN A++ Y + + AR+LF+ M ++V +WN MI GY G + LF
Sbjct: 363 FLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELF 422
Query: 364 DRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMKR-YG 401
M + I++ ++ + SG E+ L F MK+ YG
Sbjct: 423 KEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYG 465
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N I+ + + D A +F ++ ++ VS+NAMI GY NG ++ A F +
Sbjct: 264 DSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCE 323
Query: 118 MPQRDL----------------------VSW-----------------NVMISGYVRNKS 138
M R++ W ++ Y + +
Sbjct: 324 MQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGA 383
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ AR LF+MM R V++WN M+ GY +G + +F M ++ N+I++ L+A
Sbjct: 384 IHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSA 443
Query: 195 YVQNGRIEEACMLFES-KANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVS 249
+G +EE FES K ++ + G V + RL A +MP++ ++
Sbjct: 444 CSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGIT 503
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/722 (34%), Positives = 389/722 (53%), Gaps = 85/722 (11%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG-- 199
AR++F + + DV +N ++ G++ N ++ +F + + ++ N A+ +
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 200 --RIEEACMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
R + A + +A + E++ ++++ + K R+ DA+ +FDRMP +D + WNT
Sbjct: 131 GFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 253 MITGYAQNNYLAEAQRLFEE---------------------APVKDV------------- 278
MI+GY +N E+ ++F + A ++++
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 279 ------FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
+ T +S Y + GK+ A +F + V++NAMI GY +++ LF
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 333 EAMTCK------------------------------------NVASWNTMITGYAQSGEI 356
+ + + + + T Y++ EI
Sbjct: 311 KELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEI 370
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD P+ SW A+I+GY Q+G +ED++ LF EM+ N T +LS C
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSAC 430
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A L +L LGK +H + FE+ +V AL+ MY KCGS+ EA F+ + K+ ++WN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWN 490
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
TMI+GY HG G++AL +F M GI P +T + +L ACSH GLV++G E F SM
Sbjct: 491 TMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
YG P+ KHY C+VD+LGRAG L A ++ MP +P + W LLGACR++ T LA
Sbjct: 551 YGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLART 610
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
+E +FE++P+N G +VLLSN+++A + + VR + R + K GY+ +E+ H
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
F+ GD HP+ I+ LE+LE K+++ G+ T+L LHDV EEE+E M++ HSE+LA+
Sbjct: 671 VFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+G+++ G IR++KNLRVC DCH A K ISKI R+I++RD NRFHHF G CSCGD
Sbjct: 731 AFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGD 790
Query: 777 YW 778
YW
Sbjct: 791 YW 792
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 124/568 (21%), Positives = 215/568 (37%), Gaps = 161/568 (28%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY- 164
G + AR +F + + D+ +NV++ G+ N+S ++ +F + K + N+ +
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFA 125
Query: 165 --AQNGYAD-------------------------------------AARRIFDRMLEKNE 185
A +G+ D AR++FDRM EK+
Sbjct: 126 ISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 186 ISWNGLLAAYVQN-----------GRIEEACMLFESKANWEVV----------------- 217
I WN +++ Y +N I E+C ++ +++
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 218 --------SWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
S + ++ GF+ K ++ A +F D V++N MI GY N
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETEL 305
Query: 266 AQRLFEE----------------APV---------------KDVF-----TWTAMVSGYV 289
+ LF+E PV K F TA+ + Y
Sbjct: 306 SLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYS 365
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------TC 337
+ +++ AR +FD PEK+ SWNAMI+GY Q + A LF M TC
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITC 425
Query: 338 ----------KNVASW-----------------NTMITGYAQSGEITHARNLFDRMPQHD 370
++ W +I YA+ G I AR LFD MP+ +
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKN 485
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
++W +I+GY G+ +++L +F EM G F VL C++ ++ G ++
Sbjct: 486 EVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 431 QLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFG 488
++ + GFE ++ + + G ++ A E + + W T++ H
Sbjct: 546 SMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIH--- 602
Query: 489 KDA-LMLFESMKTVGIKPDDITMVGILS 515
KD L S K + PD++ +LS
Sbjct: 603 KDTNLARTVSEKLFELDPDNVGYHVLLS 630
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 153/360 (42%), Gaps = 60/360 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ-------MPQ 120
I+ + + G A +F R V+YNAMI GY NG+ + + +F + +
Sbjct: 263 ISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKS 322
Query: 121 RDLVSWNVMISG------------------------------YVRNKSLSAARNLFEMMP 150
LVS V +SG Y + + +AR LF+ P
Sbjct: 323 STLVSL-VPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESP 381
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEAC- 205
++ + SWN M+SGY QNG + A +F M N ++ +L+A Q G +
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 206 ---MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
++ + + +L+G + K + +A+ +FD MP ++EV+WNTMI+GY + +
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGH 501
Query: 263 LAEAQRLFEE------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVS 311
EA +F E AP T+ ++ G V E IF++M E +
Sbjct: 502 GQEALTIFSEMLNSGIAPTP--VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQHD 370
+ ++ + + A + EAM + S W T++ + AR + +++ + D
Sbjct: 560 YACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELD 619
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 167/412 (40%), Gaps = 94/412 (22%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF-----------------DQMP- 119
+ A VF+ MP + ++ +N MISGY N + QVF D +P
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 120 ------------------QRDLVSWNVMISGYVRNKS----LSAARNLFEMMPKRDVVSW 157
+ S + +++G++ S + A LF + D+V++
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAY 290
Query: 158 NTMLSGYAQNGYADAARRIF-DRMLEKNEISWNGLLAAYVQNGRIE--EACMLFESKANW 214
N M+ GY NG + + +F + ML ++ + L++ +G + A + K+N+
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNF 350
Query: 215 --EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+L + K + A+ +FD P + SWN MI+GY QN +A LF E
Sbjct: 351 LSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410
Query: 273 A--------PV-------------------------------KDVFTWTAMVSGYVQNGK 293
PV ++ TA++ Y + G
Sbjct: 411 MQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMITG 349
+ EAR +FD MP+KN V+WN MI+GY A +F M +A ++ ++
Sbjct: 471 IAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYA 530
Query: 350 YAQSGEITHARNLFDRMP-----QHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+ +G + +F+ M + +A ++ ++G+ + +L+ FIE
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQ-FIE 581
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 29/254 (11%)
Query: 43 RHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAM 98
R L +S K P+ WN I+ + +NG + A+ +F M + V+ +
Sbjct: 374 RKLFDESPEKSLPS-------WNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCI 426
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+S G L + V D + D S +I Y + S++ AR LF+ MPK++
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNE 486
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFES 210
V+WNTM+SGY +G+ A IF ML +++ +L A G ++E +F S
Sbjct: 487 VTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 211 ---KANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNY 262
+ +E V + ++ + L A + MP++ S W T++ ++
Sbjct: 547 MIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTN 606
Query: 263 LAE--AQRLFEEAP 274
LA +++LFE P
Sbjct: 607 LARTVSEKLFELDP 620
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/675 (37%), Positives = 379/675 (56%), Gaps = 29/675 (4%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTM 160
+G + AR+VFD++PQ + WN MI GY R + +L+++M K D ++ +
Sbjct: 82 SGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFL 141
Query: 161 LSGYAQN-----GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
L G+ ++ G + L+ N G + + G + A +F+ WE
Sbjct: 142 LKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWE 201
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
VV+WN ++ G+ + KR ++K +F M + E N + L + +
Sbjct: 202 VVTWNVVLSGYNRFKRYEESKRLFIEMEKKCEC---------VSPNSVTLVLMLSACSKL 252
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
KD+ + + Y++ G V E N + NA+I + MD AR +F+ M
Sbjct: 253 KDLVGGKCIYNKYIKEGIV-----------EPNLILENALIDMFASCGEMDAARGVFDEM 301
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++V SW +++TG+A + I AR FD+MP+ D +SW A+I GY + ++ L LF
Sbjct: 302 KTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFR 361
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+M+ + + S+L+ CA+L +LELG+ + K + F+GNAL+ MY KCG
Sbjct: 362 DMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCG 421
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+VE+A F E+ KD +W MI G A +G G++AL +F M + PD+IT +G++
Sbjct: 422 NVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMC 481
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GLV KG +F +M +G+ PN HY CMVDLLGRAG L EA ++ NMP +P++
Sbjct: 482 ACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNS 541
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
WG+LLGACR++ +LAE AA I E+EPEN +YVLL N+YAA +W ++ VR M
Sbjct: 542 IVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMM 601
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+RG+KK+ G S +E+ V+ F GD HP+ IYA LE ++ L G+ T V
Sbjct: 602 MERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVF 661
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
DVGEE+KE L HSEKLA+AY ++S G IR++KNLR+C DCH+ +SK+ R
Sbjct: 662 LDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRE 721
Query: 756 IILRDNNRFHHFSGG 770
+I+RD RFHHF G
Sbjct: 722 LIVRDKTRFHHFRHG 736
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 167/354 (47%), Gaps = 30/354 (8%)
Query: 57 GD-WDIRQWNVAITTHMRNGCCDSALHVFNSMPRR------SSVSYNAMISGY-----LL 104
GD W++ WNV ++ + R + + +F M ++ +SV+ M+S L+
Sbjct: 197 GDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLV 256
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
G+ + + + + + +L+ N +I + + AAR +F+ M RDV+SW ++++G+
Sbjct: 257 GGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGF 316
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWN 220
A D AR+ FD+M E++ +SW ++ Y++ R +E LF S + +
Sbjct: 317 ANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMV 376
Query: 221 SLMG--GFVKQKRLGD-AKWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
S++ + LG+ AK D+ ++ D N +I Y + + +A+++F E K
Sbjct: 377 SILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKK 436
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELF 332
D FTWTAM+ G NG +EA +F M E + +++ ++ + + F
Sbjct: 437 DKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFF 496
Query: 333 EAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
M + N+ + M+ ++G + A + MP + + I W +++
Sbjct: 497 SNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGA 550
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 111/279 (39%), Gaps = 34/279 (12%)
Query: 60 DIRQWNVAITTHMRNGC-CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
D+ W +I T N C D A F+ MP R VS+ AMI GYL + +F
Sbjct: 305 DVISWT-SIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLF--- 360
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEM-------------MPKRDVVSWNTMLSGYA 165
RD+ NV + L+A +L + K D N ++ Y
Sbjct: 361 --RDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYF 418
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNS 221
+ G + A++IF+ M +K++ +W ++ NG EEA +F E+ + +++
Sbjct: 419 KCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIG 478
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAPVK 276
+M + K F M V+ + N M+ + +L EA + PVK
Sbjct: 479 VMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVK 538
Query: 277 -DVFTWTAMVSGYVQNGKVDEARM----IFDAMPEKNTV 310
+ W +++ + V A M I + PE V
Sbjct: 539 PNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAV 577
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/735 (35%), Positives = 413/735 (56%), Gaps = 35/735 (4%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMI 130
G AL VF+++ +SVS+ +++ + NG A + +M + D + V I
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAI 65
Query: 131 SGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
+K L + L M+ + D++ +++ YA+ + AR+ FD M +K
Sbjct: 66 GVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTL 125
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANW-------EVVSWNSLM-----GGFVKQKRLG 233
++WN L+A Y +NG A +++ + + ++++S + G + Q R
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREI 185
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
+A+ + D + N +I Y++ L A+++F+ +DV W M+SGY + G
Sbjct: 186 EARTVASGY-ASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA 244
Query: 294 VDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNT 345
+A +F M P+ N V++ ++ + ++ R + + S N
Sbjct: 245 ATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNV 304
Query: 346 MITGYAQ-SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++ Y + S + AR +F+R+ D I+W +I Y Q G ++D+L +F +M+
Sbjct: 305 LLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAP 364
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N ++VLS CA L + GK +H + +A + N+L+ MY +CGS+++ F
Sbjct: 365 NEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVF 424
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
I DK ++SW+T+IA YA+HG + L F + G+ DD+TMV LSACSH G+++
Sbjct: 425 AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK 484
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + F SM D+G+ P+ +H+ CMVDLL RAGRL+ A+NL+ +MPF PDA W +LL
Sbjct: 485 EGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYV-LLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
C+L+ T+ A + A+ +FE+E E+ V LLSN+YA +GRW DV K R + R +K
Sbjct: 545 CKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNR---RAARKN 601
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G S++E+ + VH F GD HPE++ I A ++ L ++K G+V ++VLH+V EEEK
Sbjct: 602 PGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEK 661
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E ML YHSEKLA+AYG++S P G P+ ++KNLR C DCH A K IS+IVGR I++RD+ R
Sbjct: 662 EQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTR 721
Query: 764 FHHFSGGSCSCGDYW 778
FHHF GSCSC DYW
Sbjct: 722 FHHFENGSCSCKDYW 736
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 218/454 (48%), Gaps = 33/454 (7%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-----MLFE----SKANW 214
Y + G A +F + N +SW ++AA+ +NG EA M+ E A +
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
V +KQ +L A + ++ D + +IT YA+ L A++ F+E
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAM---------PEKNTVS---WNAMIAGYVQT 322
K + TW A+++GY +NG A I+ M P+ T S + + G +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 323 KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
R AR + ++ N +I Y++ G + AR +FDR+ D I+W +I+GYA
Sbjct: 182 GREIEARTVASGYASDSIVQ-NALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
+ G + +L LF M + N F +L+ C NL LE G+ +H ++ + G+E+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 443 VGNALLVMYCKC-GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
+GN LL MY KC S+EEA FE + +DVI+WN +I Y ++G KDAL +F+ M+
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 502 GIKPDDITMVGILSACSHTGLVEKG--TEYFYSMNRDYG--VIPNSKHYTCMVDLLGRAG 557
+ P++IT+ +LSAC+ G +G + R V+ NS ++++ R G
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENS-----LMNMYNRCG 415
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
LD+ + + + +W L+ A +G +
Sbjct: 416 SLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHS 448
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 182/404 (45%), Gaps = 65/404 (16%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
++DI IT + R + A F+ M +++ V++NA+I+GY NG A +++
Sbjct: 91 EFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQD 150
Query: 118 MPQR------------------------------------------DLVSWNVMISGYVR 135
M + D + N +I+ Y +
Sbjct: 151 MVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSK 210
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGL 191
SL +AR +F+ + RDV++WNTM+SGYA+ G A A +F RM + N +++ GL
Sbjct: 211 CGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGL 270
Query: 192 LAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVK-QKRLGDAKWIFDRMPVRD 246
L A +E+ + E ++V N L+ + K L +A+ +F+R+ RD
Sbjct: 271 LTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRD 330
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVS-----GYVQNGKVDEA 297
++WN +I Y Q +A +F++ +++V T + ++S G + GK A
Sbjct: 331 VITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHA 390
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE-- 355
+I + + V N+++ Y + +D +F A+ K++ SW+T+I YAQ G
Sbjct: 391 -LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449
Query: 356 --ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+ H L D ++ + ++ + G ++ ++ F+ M
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSM 493
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G + A +F + + +SW I+A +A++G+ ++L + M G R + + F
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ C++ L+ G+ LH +++ E +G AL+ MY +C +E A F+E+
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTV---GIKPDDITMVGILSACSHTGLVEK 525
K +++WN +IAGY+R+G + AL +++ M + G+KPD IT L ACS G + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E + G +S ++++ + G L+ A+ + + D W ++
Sbjct: 182 GRE-IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG- 238
Query: 586 RLYGKTELAEKAAEVIFEMEPEN 608
Y K A +A E+ M P +
Sbjct: 239 --YAKQGAATQALELFQRMGPND 259
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCGSV +A F I + +SW ++A +AR+G ++AL + M G++PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKN 568
V + CS + +++G + ++M + ++ + T ++ + R L+ A+
Sbjct: 61 FVVAIGVCSSSKDLKQG-QLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE--NAGMYVLLSNLYAASGRWG 626
M + TW AL+ G A K + + PE S LYA S G
Sbjct: 120 MG-KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACS-VVG 177
Query: 627 DVSKVR 632
D+S+ R
Sbjct: 178 DISQGR 183
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/677 (37%), Positives = 384/677 (56%), Gaps = 33/677 (4%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
I Y + L AR+LF+ +P+ D+ +W ++S ++G + A + ++ KN +
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA------------- 235
+ LL V +AC N + V +++ GF LG+A
Sbjct: 77 DKLLLLSVA-----KACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131
Query: 236 -KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV----- 289
+ +F+ MP RD +SW +M + Y L EA F + + + VS +
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTD 191
Query: 290 ----QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
++G+ ++ + M VS +A++ Y + A+ +F++M+ ++ SWN
Sbjct: 192 LKDLKSGREVHGFVVRNGMGGNVFVS-SALVNMYASCLSIRQAQLVFDSMSRRDTVSWNV 250
Query: 346 MITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+IT Y + E ++F RM + SW A+I G Q+G +E +L + M+ G
Sbjct: 251 LITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSG 310
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ N+ TSVL C NL SL GKQ+HG + + F AL+ MY KCG +E +
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F + +D +SWNTMI + HG G++AL+LF M G++P+ +T G+LS CSH+
Sbjct: 371 RVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSR 430
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV++G F SM+RD+ V P++ H++CMVD+L RAGRL+EA +K MP EP A WGAL
Sbjct: 431 LVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGAL 490
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LG CR+Y EL AA +FE+E +N G YVLLSN+ ++ W + S+ R MRDRGV
Sbjct: 491 LGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVT 550
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G SW++V+N+VHTF VGD + + D IY +L+ + K++ G++ +T VL DV +E
Sbjct: 551 KNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQE 610
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EKE +L HSEKLAVA+G+L++ IRV KNLR+C DCHNAIK ++KIVG II+RD+
Sbjct: 611 EKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDS 670
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHHF G CSC D+W
Sbjct: 671 LRFHHFRDGLCSCQDFW 687
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 217/497 (43%), Gaps = 53/497 (10%)
Query: 29 PANTNPYPSKKTLKRHLNSKSRNK--------PKPAGDWDIRQWNVAITTHMRNGCCDSA 80
P + P+ + K +K + NS + P+P D+ W + I+ ++G A
Sbjct: 6 PTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQP----DLPTWTILISALTKHGRSLEA 61
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-------------DLVSWN 127
+ +N ++ V + + LL + D M + D++ N
Sbjct: 62 IQYYNDFRHKNCVEPDKL----LLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGN 117
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEK 183
+I Y + + AR +FE MP RDV+SW +M S Y G A F +M
Sbjct: 118 ALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERP 177
Query: 184 NEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
N ++ + +L A +++GR E + + V ++L+ + + A+ +
Sbjct: 178 NSVTVSSILPACTDLKDLKSGR-EVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLV 236
Query: 239 FDRMPVRDEVSWNTMITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
FD M RD VSWN +IT Y N L+ R+ E + +W A++ G +QNG+
Sbjct: 237 FDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRT 296
Query: 295 DEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE----LFEAMTCKNVASWNTM 346
++A + M + N ++ +++ + + ++ +F +++ + +
Sbjct: 297 EKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTAL 356
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+ YA+ G++ +R +F M + D +SW +I + G E++L LF EM G R N
Sbjct: 357 VFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNS 416
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
FT VLS C++ ++ G + + + E + ++ + + G +EEAY +
Sbjct: 417 VTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIK 476
Query: 466 EI-VDKDVISWNTMIAG 481
++ ++ +W ++ G
Sbjct: 477 KMPIEPTAGAWGALLGG 493
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 129/314 (41%), Gaps = 61/314 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D WNV IT + N C+ L VF M + S+NA+I G + NG+ + A +V
Sbjct: 244 DTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVL 303
Query: 116 DQMPQ---------------------------------------RDLVSWNVMISGYVRN 136
+M +DL + ++ Y +
Sbjct: 304 SRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKC 363
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLL 192
L +R +F MM KRD VSWNTM+ + +G + A +F M++ N +++ G+L
Sbjct: 364 GDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVL 423
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNS-----LMGGFVKQKRLGDAKWIFDRMPVRDE 247
+ + ++E ++F+S + V ++ ++ + RL +A +MP+
Sbjct: 424 SGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPT 483
Query: 248 V-SWNTMITG--YAQNNYLAE--AQRLFE---EAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+W ++ G +N L A RLFE + P V +VS + + + ++
Sbjct: 484 AGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKL 543
Query: 300 IFDAMPEKNT-VSW 312
+ D KN SW
Sbjct: 544 MRDRGVTKNPGCSW 557
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/698 (37%), Positives = 399/698 (57%), Gaps = 29/698 (4%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA-------ARNLFEMMPKRDVVSWNTM 160
L R + QM + L + N +S + LS A ++F+ + + ++ WNTM
Sbjct: 15 LQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTM 74
Query: 161 LSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML----FESKA 212
G+A + +A +++ M L N ++ LL + ++ +E L +
Sbjct: 75 FRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGF 134
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ ++ SL+ +V+ RL DA+ + D+ RD VS+ +ITGYA + A ++F+E
Sbjct: 135 DLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDE 194
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMD 326
PVKDV +W A +SGY + G EA +F M P+++T+ +++ Q+ ++
Sbjct: 195 IPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMV--TVLSACAQSGSIE 252
Query: 327 MARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+ R++ + N+ N +I Y++ GE+ A LF + D ISW +I GY
Sbjct: 253 LGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYT 312
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAG 440
+++L LF +M R GE+ N S+LS CA+L ++++G+ +H + K G
Sbjct: 313 HMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNA 372
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+ +L+ MY KCG +E A F+ ++++ + SWN MI G+A HG A +F M+
Sbjct: 373 SSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
GI+PDDIT VG+LSACSH+G+++ G F SM RDY ++P +HY CM+DL G +G
Sbjct: 433 NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFK 492
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA+ ++ M EPD W +LL AC+++G EL E A+ + ++EPEN G YVLLSN+YA
Sbjct: 493 EAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYA 552
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
+ RW +V+K R + D+G+KKV G S +E+ + VH F +GD HP IY LEE+E
Sbjct: 553 TAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
L++ GFV T VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +
Sbjct: 613 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 672
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH A K ISKI R II RD RFHHF G CSC DYW
Sbjct: 673 CHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 194/409 (47%), Gaps = 38/409 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ I+ +++NG + A V + R VSY A+I+GY G ++ A ++FD+
Sbjct: 135 DLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDE 194
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAA 173
+P +D+VSWN ISGY + A LF+ M K +V + T+LS AQ+G +
Sbjct: 195 IPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELG 254
Query: 174 RRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R++ D N N L+ Y + G +E AC LF+ +N +V+SWN+L+GG+
Sbjct: 255 RQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHM 314
Query: 230 KRLGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFTW-- 281
+A +F M E + TM++ + +L ++ + +K V
Sbjct: 315 NLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASS 374
Query: 282 --TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
T+++ Y + G ++ A+ +FD+M ++ SWNAMI G+ R + A ++F M
Sbjct: 375 LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNG 434
Query: 340 VA----SWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQSGYSEDS 390
+ ++ +++ + SG + R++F M + + + +I SG
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSG----- 489
Query: 391 LRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E ++ + P + S+L C ++ELG+ L+K+
Sbjct: 490 --LFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKI 536
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 272/743 (36%), Positives = 410/743 (55%), Gaps = 63/743 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
++++ YL G L+ A VF ++ + +V W V+IS YV +AA LF + +
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML 207
D + + ++LS + + A R I +E EI + L++ Y + G + +A L
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANAL 185
Query: 208 F-ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQN 260
F + + +VV WN+++ + +A IF RM P D V++ ++ + +
Sbjct: 186 FGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPP--DLVTFVSVFKACSSS 243
Query: 261 NYLAEAQR------LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
L +Q L E DV TA+V+ Y + G++D AR F AMPE+N VSW +
Sbjct: 244 PSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTS 303
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----- 369
MIA + Q + +A E F AM + V + + + E H L + + Q
Sbjct: 304 MIAAFAQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAIAQEIGVAT 362
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIE---------------------------MKRYGE 402
D ++ YA+ ED++R+F K +G
Sbjct: 363 DVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGA 422
Query: 403 RLNR--SP----FTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCG 455
+ R SP + + L CA+LA+L G+Q+H + + +GNA++ MY +CG
Sbjct: 423 AIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCG 482
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
S+ +A AF+ + +D ISWN M++ A+HG +D LF +M G + + + +LS
Sbjct: 483 SLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLS 542
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GLVE G E+F +M D+GV+P ++HY CMVDLLGR GRL +A +++ MP PDA
Sbjct: 543 ACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDA 602
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
ATW AL+GACR+YG TE AAE + E+ + YV L N+Y+A+GRW D + VR M
Sbjct: 603 ATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIM 662
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
D G++K+ G S +E+++KVH F V D HP+ + IYA LE + +++ G+ T VL
Sbjct: 663 ADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVL 722
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HDV EE+KE +LR+HSEKLA+A+G++S P G +RV+KNLRVC DCHNA K ISK+ GR
Sbjct: 723 HDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGRE 782
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I++RD RFHHF G+CSCGDYW
Sbjct: 783 IVVRDVRRFHHFKDGACSCGDYW 805
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
++ ++L+ MY +CGS+E A F +I K ++ W +I+ Y G A+ LF +
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE 122
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
GI D I V +LSACS + G + + G+ + +V + GR G L +
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAG-RLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRD 181
Query: 562 AQNLMKNMPFEPDAATWGALLGA 584
A L ++ D W A++ A
Sbjct: 182 ANALFGHLERHLDVVLWNAMITA 204
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/738 (35%), Positives = 404/738 (54%), Gaps = 91/738 (12%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI-- 186
+IS + + S++ A +FE + + V ++TML GYA+N A R ++RM +E+
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERM-RCDEVMP 140
Query: 187 ---SWNGLLAAYVQN-----GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ LL +N GR E M+ + + + +++ + K +++ DA +
Sbjct: 141 VVYDFTYLLQLSGENLDLRRGR-EIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKM 199
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRL---FEEAPVKD------------------ 277
F+RMP RD VSWNT++ GYAQN + A ++ +EA K
Sbjct: 200 FERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKAL 259
Query: 278 ------------------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
V TAM+ Y + G V AR++F M +N VSWN MI GY
Sbjct: 260 RIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGY 319
Query: 320 VQTKRMDMARELFEAM-----------------TCKN----------------------V 340
Q + A F M C N V
Sbjct: 320 AQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDV 379
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
+ N++I+ Y++ + A ++F + ++W A+I GYAQ+G ++L LF EM+ +
Sbjct: 380 SVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSH 439
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
+ + SV++ A+L+ K +HG ++ + FV AL+ + KCG+++ A
Sbjct: 440 DIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTA 499
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F+ + ++ VI+WN MI GY +G G++AL LF M+ +KP++IT + +++ACSH+
Sbjct: 500 RKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHS 559
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
GLVE+G YF SM +YG+ P HY MVDLLGRAGRLD+A +++MP +P GA
Sbjct: 560 GLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGA 619
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
+LGACR++ EL EK A+ +F+++P++ G +VLL+N+YA++ W V++VR M +G+
Sbjct: 620 MLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGI 679
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGE 700
+K G S +E++N+VHTF G T HP+ RIYAYLE L ++K G+V T + HDV E
Sbjct: 680 QKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEE 738
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
+ KE +L HSE+LA+A+G+L+ G I + KNLRVC DCH A K+IS + GR II+RD
Sbjct: 739 DVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRD 798
Query: 761 NNRFHHFSGGSCSCGDYW 778
RFHHF G CSCGDYW
Sbjct: 799 LRRFHHFKNGICSCGDYW 816
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 177/384 (46%), Gaps = 60/384 (15%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----------------- 120
+ A +F MP+R VS+N +++GY NG A QV QM +
Sbjct: 194 EDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAV 253
Query: 121 RDLVSWNV----------------------MISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
DL + + M+ Y + S+ +AR +F+ M R+VVSWN
Sbjct: 254 ADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWN 313
Query: 159 TMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CMLFES 210
TM+ GYAQNG ++ A F +ML E +S G L A G +E +L E
Sbjct: 314 TMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEK 373
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
K ++V NSL+ + K KR+ A +F + + V+WN MI GYAQN + EA LF
Sbjct: 374 KIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLF 433
Query: 271 EEAPVKDV----FTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGYVQT 322
E D+ FT ++++ +A+ I + +KN A+I + +
Sbjct: 434 CEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKC 493
Query: 323 KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAII 378
+ AR+LF+ M ++V +WN MI GY +G A +LF+ M I++ ++I
Sbjct: 494 GAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVI 553
Query: 379 AGYAQSGYSEDSLRLFIEMKR-YG 401
A + SG E+ + F MK YG
Sbjct: 554 AACSHSGLVEEGMYYFESMKENYG 577
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 37/344 (10%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ T+ + G SA VF M R+ VS+N MI GY NG+ + A F +M + N
Sbjct: 285 LDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTN 344
Query: 128 VMISGYVRNKSLSAARNLFEMMPKR-------------DVVSWNTMLSGYAQNGYADAAR 174
V + G +L A NL ++ R DV N+++S Y++ D A
Sbjct: 345 VSMMG-----ALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAA 399
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQK 230
+F + K ++WN ++ Y QNG + EA LF + ++ + S++
Sbjct: 400 SVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLS 459
Query: 231 RLGDAKWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
AKWI + +R + N +I +A+ + A++LF+ + V TW AM+
Sbjct: 460 VTRQAKWIHG-LAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMI 518
Query: 286 SGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK--- 338
GY NG EA +F+ M + N +++ ++IA + ++ FE+M
Sbjct: 519 DGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGL 578
Query: 339 --NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ + M+ ++G + A MP I+ + G
Sbjct: 579 EPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLG 622
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 53/269 (19%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
+D+ N I+ + + D A VF ++ ++ V++NAMI GY NG ++ A +F +M
Sbjct: 377 FDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEM 436
Query: 119 PQRD----------------------------------LVSWNV-----MISGYVRNKSL 139
D L+ NV +I + + ++
Sbjct: 437 QSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAI 496
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY 195
AR LF++M +R V++WN M+ GY NG+ A +F+ M ++ NEI++ ++AA
Sbjct: 497 QTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAAC 556
Query: 196 VQNGRIEEACMLFES-KANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVSW 250
+G +EE FES K N+ + G V + RL DA MPV+ ++
Sbjct: 557 SHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITV 616
Query: 251 NTMITGYA---QNNYLAE--AQRLFEEAP 274
+ G +N L E A LF+ P
Sbjct: 617 LGAMLGACRIHKNVELGEKTADELFDLDP 645
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
R+FI Y R P +L C +L L Q+ ++K GF L+ ++
Sbjct: 35 RIFIPSHVY-----RHPSAILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLF 86
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
CK S+ EA FE + K + ++TM+ GYA++ +DA+ +E M+ + P
Sbjct: 87 CKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFT 146
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
+L + +G E + M G N T +V+L + ++++A + + MP
Sbjct: 147 YLLQLSGENLDLRRGRE-IHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP- 204
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ D +W ++ Y + A +A +V+ +M+
Sbjct: 205 QRDLVSWNTVVAG---YAQNGFARRAVQVVLQMQ 235
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/689 (37%), Positives = 385/689 (55%), Gaps = 76/689 (11%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAA 194
L A ++FE + + +++ WNTML G+A + +A ++ RM+ N S+ LL +
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
++ EE + + +V+ + +V ++I
Sbjct: 74 CAKSKAFEEG-----RQIHAQVLKLGCGLDRYVH----------------------TSLI 106
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
+ YA+N L +A+++F+ + +DV + TA+++GY G AR +FD + E++ VSWNA
Sbjct: 107 SMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNA 166
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVA--------------------------SW----- 343
MI GYV+ R + A ELF+ M NV SW
Sbjct: 167 MITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDD 226
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
N +I Y++ G++ A LF+ + D +SW +I GY + +++L
Sbjct: 227 DDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEAL 286
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV--GFEAGCFVGNALLV 449
LF EM R GE N SVL CA+L ++++G+ +H + K G + +L+
Sbjct: 287 LLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLID 346
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCG +E A+ F ++ + + SWN MI G+A HG A LF M+ ++PDDIT
Sbjct: 347 MYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDIT 406
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
VG+LSACSH+GL++ G + F SM +DY + P +HY CM+DLLG +G EA+ ++ M
Sbjct: 407 FVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTM 466
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
P EPD W +LL AC+ +G ELAE A+ + ++EPEN+G YVLLSN+YA +GRW DV+
Sbjct: 467 PMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVA 526
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
+VR + +G+KKV G S +EV + VH F +GD LHP + IY LEE++ +L++ GF
Sbjct: 527 RVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAP 586
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
T VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A K IS
Sbjct: 587 DTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLIS 646
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KI R I+ RD RFHHF G CSC DYW
Sbjct: 647 KIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 164/340 (48%), Gaps = 44/340 (12%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+ ++IS Y NG L+ AR+VFD RD+VS +I+GY +AR +F+ + +RDV
Sbjct: 102 HTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDV 161
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACMLFES 210
VSWN M++GY +NG + A +F M+ N E + +++A Q+G IE
Sbjct: 162 VSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIE-------- 213
Query: 211 KANWEVVSW-----------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
+V SW N+L+ + K + A +F+ + +D VSWNT+
Sbjct: 214 -LGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTL 272
Query: 254 ITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-- 307
I GY N EA LF+E + T +++ G +D R I + +K
Sbjct: 273 IGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLK 332
Query: 308 ----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
T ++I Y + ++ A ++F +M ++++SWN MI G+A G A +LF
Sbjct: 333 GVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLF 392
Query: 364 DRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
RM + D I++ +++ + SG + ++F M +
Sbjct: 393 SRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ 432
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 196/412 (47%), Gaps = 43/412 (10%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I+ + RNG + A VF++ R VS A+I+GY G AR+VFD++ +RD+VSWN
Sbjct: 106 ISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWN 165
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSGYAQNGYADAARRIFDRMLEK 183
MI+GYV N A LF+ M + +V + +++S AQ+G + R++ + +
Sbjct: 166 AMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDD 225
Query: 184 NEISW--------NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
++ N L+ Y + G +E A LFE + +VVSWN+L+GG+ +A
Sbjct: 226 DDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEA 285
Query: 236 KWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQ--RLFEEAPVKDVFT----WTAMV 285
+F M ++V+ +++ A + + ++ + +K V T+++
Sbjct: 286 LLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLI 345
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA---- 341
Y + G ++ A +F++M ++ SWNAMI G+ R + A +LF M V
Sbjct: 346 DMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDI 405
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIE 396
++ +++ + SG + R +F M Q ++ + +I SG LF E
Sbjct: 406 TFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSG-------LFKE 458
Query: 397 MKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKVGFE-AGCFV 443
+ + P + S+L C +LEL + +L+K+ E +G +V
Sbjct: 459 AEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYV 510
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 160/366 (43%), Gaps = 42/366 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ IT + G SA VF+ + R VS+NAMI+GY+ NG+ + A ++F +M
Sbjct: 129 DVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM 188
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW-----------------NTMLS 162
+ ++ + V + S + L R V SW N ++
Sbjct: 189 RTNVRPDEGTLVSVVSACAQSGSIEL-----GRQVHSWVDDDDDDHGFSSSLKIVNALID 243
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVS 218
Y++ G + A +F+ + K+ +SWN L+ Y +EA +LF+ S V+
Sbjct: 244 LYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVT 303
Query: 219 WNSLMGGFVKQKRLGDAKWI---FDR--MPVRDEVSWNT-MITGYAQNNYLAEAQRLFEE 272
S++ + +WI D+ V +E S T +I YA+ + A ++F
Sbjct: 304 LLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNS 363
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMA 328
+ + +W AM+ G+ +G+ + A +F M E + +++ +++ + +D+
Sbjct: 364 MLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLG 423
Query: 329 RELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYA 382
R++F++MT + + MI SG A + MP + D + W +++
Sbjct: 424 RQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACK 483
Query: 383 QSGYSE 388
+ G E
Sbjct: 484 KHGNLE 489
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 278/753 (36%), Positives = 413/753 (54%), Gaps = 76/753 (10%)
Query: 79 SALHVFNSMPRRSSVSYNAM---ISGYLLNG--QLDPARQVFDQMPQRDLVSWNVMISGY 133
S+ + F+ +P S Y+++ S LL+ L R + QM + L + N +S
Sbjct: 12 SSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKL 71
Query: 134 VRNKSLSA-------ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
+ LS A ++F+ + + +++ WNTM G+A + +A +++ M+
Sbjct: 72 IEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISL--- 128
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
GLL + ++C +SKA E + G +K LG D
Sbjct: 129 ---GLLPNSYTFPFVLKSCA--KSKAFKE---GQQIHGHVLK---LGCD---------LD 168
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++I+ Y QN L +A ++F+++P +DV ++TA++ GY G ++ A+ +FD +P
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS------------------------ 342
K+ VSWNAMI+GY +T A ELF+ M NV
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 343 --W-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
W N +I Y++ GE+ A LF+R+P D ISW +I GY
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAGCFVGN 445
+++L LF EM R GE N S+L CA+L ++++G+ +H + K G +
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+L+ MY KCG +E A+ F I+ K + SWN MI G+A HG + LF M+ +GI+P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
DDIT VG+LSACSH+G+++ G F +M +DY + P +HY CM+DLLG +G EA+ +
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEM 528
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ M EPD W +LL AC+++G EL E AE + ++EPEN G YVLLSN+YA++GRW
Sbjct: 529 INMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRW 588
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
+V+K R + D+G+KKV G S +E+ + VH F +GD HP IY LEE+E L++
Sbjct: 589 NEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKA 648
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
GFV T VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A
Sbjct: 649 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 708
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKI R II RD RFHHF G CSC DYW
Sbjct: 709 KLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 194/413 (46%), Gaps = 38/413 (9%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ I+ +++NG + A VF+ P R VSY A+I GY G ++ A++
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGY 169
+FD++P +D+VSWN MISGY + A LF+ M K +V + T++S AQ+G
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 170 ADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ R++ D N N L+ Y + G +E AC LFE +V+SWN+L+GG
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVF 279
+ +A +F M E + TM++ +L ++ + +K V
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 280 TW----TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
T+++ Y + G ++ A +F+++ K+ SWNAMI G+ R D + +LF M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 336 TCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGY 386
+ ++ +++ + SG + R++F M Q ++ + +I SG
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG- 520
Query: 387 SEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C ++ELG+ L+K+
Sbjct: 521 ------LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 567
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 280/820 (34%), Positives = 418/820 (50%), Gaps = 127/820 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS-SVSYNAMISGYLLNGQLDPAR 112
K D + N+ + + + +G A +F+ MP R+ + S N M+SGY +GQL A
Sbjct: 27 KTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAH 86
Query: 113 QVFDQMPQ--RDLVSWNVMISGYVRNKSLSA--ARNLFEMM------PKR---------- 152
+F P RD V+W VMI + A A +LF M P R
Sbjct: 87 HLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLP 146
Query: 153 ---------------------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
+VV NT+L Y ++G AARR+F M ++
Sbjct: 147 PASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDS 206
Query: 186 ISWNGLLAAYVQNGRIEEACMLFES----------------------------------- 210
+++N ++ + G EA LF +
Sbjct: 207 VTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGL 266
Query: 211 ---KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ V NSL+ + K L + K +F M RD VS+N MI GYA N +
Sbjct: 267 VARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVL 326
Query: 268 RLFEEAPV----KDVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
RLF E + + +++S ++ GK A+++ + ++ V NA+I
Sbjct: 327 RLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVG-NALIDM 385
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + +D A+ F K SW MITG Q+G+
Sbjct: 386 YSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQ----------------------- 422
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
E++L+LF M+R G +R+ F+S + +NLA + LG+QLH L++ G
Sbjct: 423 --------QEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHM 474
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+ F G+ALL MY KCG ++EA F+E+ +++ ISWN +I+ YA +G K+A+ +FE M
Sbjct: 475 SSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGM 534
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G KPD +T + +LSACSH GL E+ +YF M +YG+ P +HY+C++D LGR GR
Sbjct: 535 LCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGR 594
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
D+ Q ++ MPFE D W ++L +CR +G +LA AAE +F M +A YV+LSN+
Sbjct: 595 FDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNI 654
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
+A +G+W D + V+ MRDRG++K TGYSW+EV++KV++FS D +P I LE L
Sbjct: 655 FAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERL 714
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
++ + G+ T L V ++ K L+YHSE+LA+A+ +++ P G PIRVMKNL C
Sbjct: 715 YKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSAC 774
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+AIK +SKIV R II+RD++RFHHF G CSCGDYW
Sbjct: 775 VDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/584 (38%), Positives = 359/584 (61%), Gaps = 16/584 (2%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
L + ++V + + L+ + + L A +F ++ + +N+ I G++ + ++
Sbjct: 38 LIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKS 97
Query: 267 QRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEA--------RMIFDAMPEKNTVSWNA 314
+ ++ V D T+ +V Q G +D R FD+ + N+
Sbjct: 98 FHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDS----DVYVQNS 153
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++ Y + A +F ++C +V SW +M+ GY +SG++T AR LFD+MP+ + ++W
Sbjct: 154 LVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTW 213
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+ +I+GYA++ + + ++ L+ ++ G N + SV+++CA+L +LELG++ H +++
Sbjct: 214 SVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILR 273
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
+G AL+ MY +CGS+++A F+++ +D +SW T+IAG+A HG+ + AL
Sbjct: 274 NKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEY 333
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F M+ G+ P +IT +LSACSH GLVE+G E F SM RDY + P +HY CMVDLLG
Sbjct: 334 FSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLG 393
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAG+L EA+ + MP +P+A WGALLGACR++ +E+AE+A + + E++PE++G YVL
Sbjct: 394 RAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVL 453
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
LSN+YA + +W +V +R M++RGV K GY+ E+ KVH F++GD HPE +I
Sbjct: 454 LSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERM 513
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
EE+ K++ G+ + L D+ EEEKE + HSEKLA+AY I+ PIR++KN
Sbjct: 514 WEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKN 573
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LRVCEDCH A K ISK+ R +I+RD NRFHHF GG+CSC DYW
Sbjct: 574 LRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 144/296 (48%), Gaps = 22/296 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N++++ Y G + A VF ++ D+VSW M++GY+++ +++AR LF+ MP++++V
Sbjct: 152 NSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLV 211
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CML 207
+W+ M+SGYA+N + D A ++ + + NE ++A+ G +E +
Sbjct: 212 TWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYI 271
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+K ++ +L+ + + + A W+FD++P RD +SW T+I G+A + Y +A
Sbjct: 272 LRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKAL 331
Query: 268 RLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSWNAMIAG 318
F + T+TA++S G V+ +F++M E + M+
Sbjct: 332 EYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDL 391
Query: 319 YVQTKRMDMARELFEAMTCK-NVASWNTMITG--YAQSGEITH--ARNLFDRMPQH 369
+ ++ A + M K N W ++ ++ EI + L + P+H
Sbjct: 392 LGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEH 447
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 20/280 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N +T + G SA +VF + VS+ +M++GY+ +G + AR++FD+
Sbjct: 145 DSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDK 204
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT----MLSGYAQNGYADAA 173
MP+++LV+W+VMISGY +N A L+ ++ V + T +++ A G +
Sbjct: 205 MPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELG 264
Query: 174 RRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R D +L N I L+ Y + G I++A +F+ + +SW +L+ GF
Sbjct: 265 ERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMH 324
Query: 230 KRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD------VF 279
A F RM E+++ +++ + + LFE +D +
Sbjct: 325 GYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMK-RDYRIEPRLE 383
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAG 318
+ MV + GK+ EA + MP K N W A++
Sbjct: 384 HYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGA 423
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 95/232 (40%), Gaps = 37/232 (15%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
++P S L +C L+ L++ +H L++ F + L+ + ++ A F
Sbjct: 15 KNPKLSFLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFY 71
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+I + ++ +N+ I G++ + + K G+ PD++T ++ AC+ G ++
Sbjct: 72 QIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDM 131
Query: 526 GTE------------------YFYSMNRDYGVIPNSKH------------YTCMVDLLGR 555
G + +M G I ++ + +T MV +
Sbjct: 132 GIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIK 191
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+G + A+ L MP E + TW ++ Y K +KA E+ F ++ E
Sbjct: 192 SGDVTSARKLFDKMP-EKNLVTWSVMISG---YAKNSFFDKAIELYFLLQSE 239
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 269/760 (35%), Positives = 417/760 (54%), Gaps = 75/760 (9%)
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP--QRDLVSWNVMISGYVRNKSLSAAR 143
S+ +V N++++ Y + AR VFD MP RDLVSW M S RN + + A
Sbjct: 78 SLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEAL 137
Query: 144 NLFE------MMPK-----------------------------------RDVVSWNTMLS 162
LF ++P DV ++
Sbjct: 138 RLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALID 197
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVS 218
+A+NG A RR+FD + E+ + W L+ Y Q+G +EA LF E+ + +
Sbjct: 198 MFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYT 257
Query: 219 WNSLMGGFVK--QKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQNN---YLAEAQR 268
+S++ + RLG + +R D ++ YA+++ L A+
Sbjct: 258 LSSMLSACTELGSFRLGQQ---LHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNARE 314
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI-FDAMPEK----NTVSWNAMIAGYVQTK 323
+F P +V WTA++SGYVQ G D MI F M + N +++++M+
Sbjct: 315 VFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLG 374
Query: 324 RMDMARELFEAMTCKNVASWNT----MITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
D R++ N+A N +++ YA+SG I AR+ FD++ + + +S++ +
Sbjct: 375 DQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLD 434
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
G +S +D +++R ++ F S++S A++ L G++LH +K GF +
Sbjct: 435 GDGRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGS 489
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
+GN+L+ MY +CG + +A F+E+ D +VISW +MI+G A+HG+ AL LF M
Sbjct: 490 DRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMI 549
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
G+KP+D+T + +LSACSH GLV++G E+F M + +G+IP +HY CMVDLLGR+G +
Sbjct: 550 AAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLV 609
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
++A + + MP + DA W LLGAC+ + ++ E AA + ++EP++ YVLLSNLY
Sbjct: 610 EDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLY 669
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A +G W V+++R MRD+ + K G SW+ V N +H F GDT HP+ + IY LE L
Sbjct: 670 AEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLI 729
Query: 680 FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS-IPAGRPIRVMKNLRVC 738
++K G+V T +VLHD+ +E KE L HSEK+AVA+G++S A +PIR+ KNLRVC
Sbjct: 730 REIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVC 789
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+A+K++SK GR IILRD+NRFH G CSCG+YW
Sbjct: 790 VDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 152/328 (46%), Gaps = 30/328 (9%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV-FDQMPQRDL----VSWNVMISGY 133
+A VFN MP+ + +++ A++SGY+ G D + F +M + ++++ M+
Sbjct: 311 NAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKAC 370
Query: 134 VRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ R + K ++ V N ++S YA++G + AR FD++ EKN +S++
Sbjct: 371 ANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFS 430
Query: 190 GLL-----AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG--DAKWIFDRM 242
G L + Q+ +IE + + ++S + +G K +RL K F
Sbjct: 431 GNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFG-- 488
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
D N++++ Y++ YL +A ++F+E +V +WT+M+SG ++G A +F
Sbjct: 489 --SDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFH 546
Query: 303 AM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQS 353
M + N V++ A+++ + +E F M + + M+ +S
Sbjct: 547 DMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRS 606
Query: 354 GEITHARNLFDRMP-QHDCISWAAIIAG 380
G + A + + MP Q D + W ++
Sbjct: 607 GLVEDALDFINEMPCQVDALVWKTLLGA 634
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 200/495 (40%), Gaps = 105/495 (21%)
Query: 57 GDW--DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
G W D+ I +NG + VF+ + R+ V + +I+ Y +G D A ++
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVEL 242
Query: 115 FDQMP----QRDLVSWNVMISG-----------------------------------YVR 135
F M Q D + + M+S Y +
Sbjct: 243 FLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAK 302
Query: 136 N---KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI-FDRMLEK----NEIS 187
+ +SL AR +F MPK +V++W +LSGY Q G D I F +ML + N I+
Sbjct: 303 SHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHIT 362
Query: 188 WNGLLAAYVQNG------RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
++ +L A G +I C+ + A+ VV N+L+ + + + +A+ FD+
Sbjct: 363 YSSMLKACANLGDQDSGRQIHTHCVK-SNLADLNVVG-NALVSMYAESGSIEEARHAFDQ 420
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI- 300
+ ++ VS++ + G ++N + Q E + FT+ +++S G + + + +
Sbjct: 421 LYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGIS-TFTFGSLISAAASVGMLTKGQRLH 479
Query: 301 ---FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
A + N++++ Y + + A ++F+ M NV SW +MI+G
Sbjct: 480 ALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISG-------- 531
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A+ GY+ +L LF +M G + N + +VLS C+
Sbjct: 532 -----------------------LAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACS 568
Query: 418 NLASLELGK------QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDK 470
+ ++ GK Q H L+ C V + + G VE+A E+
Sbjct: 569 HAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVD-----LLGRSGLVEDALDFINEMPCQV 623
Query: 471 DVISWNTMIAGYARH 485
D + W T++ H
Sbjct: 624 DALVWKTLLGACKTH 638
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/668 (38%), Positives = 380/668 (56%), Gaps = 30/668 (4%)
Query: 118 MPQRDLVSWNVM--ISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYAD 171
MP R V N + + +++KSL+ A+ + + K D + + Y
Sbjct: 1 MPLRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVV 60
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
ARR+FD + + I WN ++ AY NG + A L+ S + V N FV +
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRP-NKYTYPFVLKAC 119
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
G + + D V ++ + + DVF TA+V Y +
Sbjct: 120 SG-------LLAIEDGVEIHSHAKMFGLES---------------DVFVCTALVDFYAKC 157
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
G + EA+ +F +M ++ V+WNAMIAG D A +L M + + ++ I G
Sbjct: 158 GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 352 QSGE-ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ + + +AR +FD M + +SW+A+I GY S +++L +F M+ G + +
Sbjct: 218 PTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTML 277
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
VL C++LA+L+ G HG L+ GF + NAL+ MY KCG + A F +
Sbjct: 278 GVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH 337
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D++SWN MI GY HG G +AL LF + +G+KPDDIT + +LS+CSH+GLV +G +F
Sbjct: 338 DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWF 397
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
+M+RD+ ++P +H CMVD+LGRAG +DEA + ++NMPFEPD W ALL ACR++
Sbjct: 398 DAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 457
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
EL E+ ++ I + PE+ G +VLLSN+Y+A+GRW D + +R+ +D G+KK+ G SW+E
Sbjct: 458 IELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIE 517
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
+ VH F GD H + +I LEEL ++K+ G+ V DV EEEKE +L YH
Sbjct: 518 INGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYH 577
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SEKLA+A+GIL++ AGRPI V KNLRVC DCH AIK ++ I R I +RD NRFHHF G
Sbjct: 578 SEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNG 637
Query: 771 SCSCGDYW 778
+C+CGD+W
Sbjct: 638 TCNCGDFW 645
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 17/266 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + G A +F+SM R V++NAMI+G L G D A Q+ QM
Sbjct: 143 DVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQ 202
Query: 120 QRDLVSWNVMISGYVRN-KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
+ + + I G + + L AR +F++M R+ VSW+ M+ GY + A IF
Sbjct: 203 EEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIF- 261
Query: 179 RMLEKNEISWN-----GLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
RM++ + I + G+L A +Q+G ++ A + + N+L+ + K
Sbjct: 262 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFAT-DTLICNALIDMYSK 320
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAM 284
++ A+ +F+RM D VSWN MI GY + EA LF + D T+ +
Sbjct: 321 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 380
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTV 310
+S +G V E R+ FDAM ++
Sbjct: 381 LSSCSHSGLVMEGRLWFDAMSRDFSI 406
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 200/457 (43%), Gaps = 60/457 (13%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMI---SGYLL- 104
P P+ + WN I + NG D A+ +++SM R + +Y ++ SG L
Sbjct: 70 PNPS----VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125
Query: 105 --NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLS 162
++ ++F + D+ ++ Y + L A+ LF M RDVV+WN M++
Sbjct: 126 EDGVEIHSHAKMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV------ 216
G + G D A ++ +M E+ + + + + C+L+ K ++V
Sbjct: 184 GCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ----CLLYARKI-FDVMGVRNE 238
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITGYAQNNYLAEAQR------- 268
VSW++++GG+V + +A IF M + + TM+ ++LA Q
Sbjct: 239 VSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY 298
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY----VQTKR 324
L D A++ Y + GK+ AR +F+ M + VSWNAMI GY + +
Sbjct: 299 LIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 358
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ--------HDCISWAA 376
+ + +L + ++ +++ + SG + R FD M + CI
Sbjct: 359 LGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVD 418
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
I+ ++G +++ M + ++++LS C ++ELG+++ ++ +G
Sbjct: 419 IL---GRAGLIDEAHHFIRNMPF---EPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 472
Query: 437 FEAGCFVGNALLV--MYCKCGSVEEAYHAFEEIVDKD 471
E+ GN +L+ +Y G ++A H I KD
Sbjct: 473 PES---TGNFVLLSNIYSAAGRWDDAAHI--RITQKD 504
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/557 (43%), Positives = 334/557 (59%), Gaps = 35/557 (6%)
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSW 312
YA L + LF VF WTA++ G+ G ++A + M E N ++
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 313 NAMIAG----------------------YVQTKRMDM---------ARELFEAMTCKNVA 341
++++ YV+T +D+ A++LF+ M K++
Sbjct: 132 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 191
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
S M+T YA+ GE+ AR LFD M + D + W +I GY Q+G ++L LF M +
Sbjct: 192 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK 251
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ N SVLS C L +LE G+ +H + G + VG AL+ MY KCGS+E+A
Sbjct: 252 AKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDAR 311
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F++I DKDV++WN+MI GYA HGF ++AL LF+SM +G+ P +IT +GILSAC H+G
Sbjct: 312 LVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSG 371
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
V +G + F M +YG+ P +HY CMV+LLGRAG +++A L+KNM EPD WG L
Sbjct: 372 WVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTL 431
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACRL+GK L EK E++ + N+G Y+LLSN+YAA G W V+++R M+D GVK
Sbjct: 432 LGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVK 491
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G S +EV NKVH F G HP++ IY LEE+ LK G+ T +VLHD+GE
Sbjct: 492 KEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGET 551
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EKE L HSEKLA+A+G+++ G I+++KNLRVC DCH K ISKI GR I++RD
Sbjct: 552 EKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDR 611
Query: 762 NRFHHFSGGSCSCGDYW 778
NRFHHF GSCSCGDYW
Sbjct: 612 NRFHHFVNGSCSCGDYW 628
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 25/331 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ Y G + A+Q+FD MP++ LVS M++ Y ++ L AAR LF+ M +RD V
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 222
Query: 156 SWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CML 207
WN M+ GY QNG + A +F RML + NE++ +L+A Q G +E +
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + V +L+ + K L DA+ +FD++ +D V+WN+MI GYA + + EA
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342
Query: 268 RLFEEA------PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMI 316
+LF+ P T+ ++S +G V E IF+ M ++ + + M+
Sbjct: 343 QLFKSMCRMGLHPTN--ITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMV 400
Query: 317 AGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
+ ++ A EL + M + + W T++ G+I + + + + +
Sbjct: 401 NLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSG 460
Query: 376 AIIA---GYAQSGYSEDSLRLFIEMKRYGER 403
I YA G + RL MK G +
Sbjct: 461 TYILLSNIYAAVGNWDGVARLRTMMKDSGVK 491
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 157/373 (42%), Gaps = 55/373 (14%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
YA G D + +F R + W ++ + G E+A + V
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 224 GGFVKQKRLGDAKWIFD---RMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVF 279
+K + K + ++ ++ T ++ YA+ + AQ+LF+ P K +
Sbjct: 132 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 191
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---- 335
+ TAM++ Y ++G++D AR++FD M E++ V WN MI GY Q + A LF M
Sbjct: 192 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK 251
Query: 336 -------------TCK----------------------NVASWNTMITGYAQSGEITHAR 360
C NV ++ Y++ G + AR
Sbjct: 252 AKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDAR 311
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+FD++ D ++W ++I GYA G+S+++L+LF M R G F +LS C +
Sbjct: 312 LVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSG 371
Query: 421 SLELGKQLHGQLV-KVGFEA-----GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVI 473
+ G + ++ + G E GC V + + G VE+AY + + ++ D +
Sbjct: 372 WVTEGWDIFNKMKDEYGIEPKIEHYGCMVN-----LLGRAGHVEQAYELVKNMNIEPDPV 426
Query: 474 SWNTMIAGYARHG 486
W T++ HG
Sbjct: 427 LWGTLLGACRLHG 439
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 154/311 (49%), Gaps = 24/311 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + + R G SA +F++MP +S VS AM++ Y +G+LD AR +FD
Sbjct: 156 DSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDG 215
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAA 173
M +RD V WNVMI GY +N + A LF M K + V+ ++LS Q G ++
Sbjct: 216 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 275
Query: 174 RRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
R + +E N I +N L+ Y + G +E+A ++F+ + +VV+WNS++ G+
Sbjct: 276 RWVHS-YIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAM 334
Query: 229 QKRLGDAKWIFD---RMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT---- 280
+A +F RM + +++ +++ + ++ E +F + +KD +
Sbjct: 335 HGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNK--MKDEYGIEPK 392
Query: 281 ---WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ MV+ + G V++A + M E + V W ++ ++ + ++ E +
Sbjct: 393 IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLV 452
Query: 337 CKNVASWNTMI 347
+N+A+ T I
Sbjct: 453 DQNLANSGTYI 463
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 10/185 (5%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H L + G + + L Y G ++ + F + V W +I G+A G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+ AL + M T G++P+ T IL C +E G + +S G +
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPG-KALHSQAVKLGFDSDLYVR 162
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
T ++D+ R G + AQ L MP E + A+L +G+ + AA V+F+
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMP-EKSLVSLTAMLTCYAKHGELD----AARVLFDGME 217
Query: 607 ENAGM 611
E G+
Sbjct: 218 ERDGV 222
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/534 (43%), Positives = 335/534 (62%), Gaps = 1/534 (0%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + ++ YA+ L A+R+F P +DV AM+S ++G V+EAR +FD M
Sbjct: 44 DMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMT 103
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
E+N+ SWN+MI Y + ++ AR +F+ K+V SWN +I GY +S ++ A+ LF
Sbjct: 104 ERNSCSWNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLL 163
Query: 366 M-PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
M + ++W +I+ Y Q G ++ +F +M+ + S+LS CA+L +L++
Sbjct: 164 MGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDM 223
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G+ +HG + + +GNAL+ MYCKCG++E A F + K++ WN++I G
Sbjct: 224 GEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGM 283
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
+G G++A+ F M+ GIKPD +T VGILS CSH+GL+ G YF M YG+ P +
Sbjct: 284 NGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVE 343
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CMVDLLGRAG L EA L++ MP +P++ G+LL AC+++ T+L E+ + + E+
Sbjct: 344 HYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLEL 403
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
+P + G YV LSNLYA+ RW DV+ R M RGV K G S +EV N VH F GDT
Sbjct: 404 DPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTS 463
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
HP+ +I A+L+E+ +LK G V +T VLHD+ EEEKE +RYHSE++AVA+G++S P
Sbjct: 464 HPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTP 523
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G+ IRV+KNLR C DCH+A+K IS R II+RD RFHHF GSCSC DYW
Sbjct: 524 PGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 224/497 (45%), Gaps = 83/497 (16%)
Query: 87 MPRRSSVSY---NAMISGYLLNGQLDPAR--QVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
+P ++S S + ISG QL A Q+ + D++ ++ Y + L
Sbjct: 7 LPSKTSFSLILRSCAISG---EAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKC 63
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
A+ +F MP+RDVV+ N M+S +++GY + AR +FD M E+N SWN ++ Y + G I
Sbjct: 64 AKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDI 123
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-PVRDEVSWNTMITGYAQN 260
A ++F+ +VVSWN+++ G+ K K+L A+ +F M R+ V+WNTMI+ Y Q
Sbjct: 124 NSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQC 183
Query: 261 NYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
A +F++ ++V T +++S G +D W I
Sbjct: 184 GEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE-------------W---I 227
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
GY++TKR+ + +V N +I Y + G + A ++F + + + W +
Sbjct: 228 HGYIRTKRLKI-----------DVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNS 276
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV- 435
II G +G E+++ FI M++ G + + F +LS C++ L G++ +++ V
Sbjct: 277 IIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVY 336
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G E G V + M+ R G+ K+AL L
Sbjct: 337 GLEPG-------------------------------VEHYGCMVDLLGRAGYLKEALELI 365
Query: 496 ESMKTVGIKPDDITMVGILSACS---HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+M +KP+ + + +L AC T L E+ T+ ++ G +Y + +L
Sbjct: 366 RAMP---MKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDG-----GNYVFLSNL 417
Query: 553 LGRAGRLDEAQNLMKNM 569
R D+ K M
Sbjct: 418 YASLSRWDDVNTCRKLM 434
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 18/306 (5%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A VF MPRR V+ NAMIS +G ++ AR +FD M +R+ SWN MI+ Y + +
Sbjct: 64 AKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDI 123
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQN 198
++AR +F+ P +DVVSWN ++ GY ++ AA+ +F M +N ++WN +++AYVQ
Sbjct: 124 NSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQC 183
Query: 199 GRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSW 250
G A +F+ + V V+ SL+ L +WI + + D V
Sbjct: 184 GEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLG 243
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
N +I Y + L A +F K++F W +++ G NG+ +EA F M ++
Sbjct: 244 NALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIK 303
Query: 308 -NTVSWNAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARN 361
+ V++ +++G + + + F M V + M+ ++G + A
Sbjct: 304 PDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALE 363
Query: 362 LFDRMP 367
L MP
Sbjct: 364 LIRAMP 369
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+++ F+ +L +CA +LG+ H Q++K+GFE + LL Y K G ++ A F
Sbjct: 9 SKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVF 68
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFE-----------SMKTVGIKPDDITMVGI 513
+ +DV++ N MI+ ++HG+ ++A LF+ SM T K DI +
Sbjct: 69 MGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARL 128
Query: 514 LSAC-------SHTGLVE---------KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
+ C S +++ E F M G NS + M+ + G
Sbjct: 129 MFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLM----GSARNSVTWNTMISAYVQCG 184
Query: 558 RLDEAQNLMKNMPFE---PDAATWGALLGACRLYGKTELAE 595
A ++ + M E P T +LL AC G ++ E
Sbjct: 185 EFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE 225
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/757 (34%), Positives = 414/757 (54%), Gaps = 86/757 (11%)
Query: 108 LDPARQVFDQM---PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
L+ RQ+ D++ ++ N ++ Y + S+++AR F+ + +++ SW +ML+ Y
Sbjct: 40 LESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAY 99
Query: 165 AQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKA-----NWEVVS 218
AQNG+ AA ++ RM L+ N + + +L A +EE + + +V+
Sbjct: 100 AQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVIL 159
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVK- 276
NSL+ + K L DAK +F+RM R VS WN MI YAQ+ + EA RL+E+ V+
Sbjct: 160 ENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEP 219
Query: 277 DVFTWTAMVS-----GYVQNGK------------------------------VDEARMIF 301
V T+T+++S G + G+ +D+A IF
Sbjct: 220 SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIF 279
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN 344
+P ++ VSW+AMIA + +T D A E + M C +V
Sbjct: 280 QRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLR 339
Query: 345 ----------------TMITG------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
T++ G Y G + AR+LFD++ D W +I GY+
Sbjct: 340 AGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYS 399
Query: 383 QSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
+ G+ L L+ EMK + + ++ V+S CA+L + +Q H + G +
Sbjct: 400 KQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDF 459
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
+ +L+ MY + G++E A F+++ +D ++W T+IAGYA+HG AL L++ M+
Sbjct: 460 VLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELE 519
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G +P ++T + +L ACSH GL E+G + F S+ DY + PN HY+C++DLL RAGRL +
Sbjct: 520 GAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSD 579
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A+ L+ MP EP+ TW +LLGA R++ + A AA I +++P + YVLLSN++A
Sbjct: 580 AEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAV 639
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
+G ++ VR M RGVKK G SW+EV +++H F+VGD HP I+A L+ L K
Sbjct: 640 TGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPK 699
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
+K+ G+V ++ VLHDVGE+EKE +LR HSEKLA+A+G+++ G +R+ LR+C DC
Sbjct: 700 IKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDC 759
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H+A+K IS I R II+RD++RFH F G CSCGDYW
Sbjct: 760 HSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 162/392 (41%), Gaps = 67/392 (17%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY--------------- 102
+ D+ N +T + R C D A +F +PRR VS++AMI+ +
Sbjct: 253 ELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSK 312
Query: 103 ----------------LLN----GQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKS 138
LL G L R V DQ+ + LV+ ++ Y S
Sbjct: 313 MQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGS 372
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-----LEKNEISWNGLLA 193
L AR+LF+ + RD W ++ GY++ G+ ++ M + +I ++ +++
Sbjct: 373 LDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVIS 432
Query: 194 AYVQNGRIEEACMLFESKANWEV-------VSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
A G +A ++ ++ E V SL+ + + L A+ +FD+M RD
Sbjct: 433 ACASLGAFADA---RQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRD 489
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF- 301
++W T+I GYA++ A L++E ++ T+ ++ G ++ + +F
Sbjct: 490 TLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFI 549
Query: 302 ----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG---YAQS 353
D N ++ +I + R+ A EL AM + N +W++++ +
Sbjct: 550 SIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDV 609
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
THA ++ D S+ + +A +G
Sbjct: 610 KRATHAAGQITKLDPVDPASYVLLSNVHAVTG 641
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 392 RLFIEMKRYGERLNRSP-FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
R ++ ++ G R + S + L C +L S+ +Q+H ++ A F+GN ++
Sbjct: 12 RFQLKEEKAGSRFDSSGHYRDALRQCQDLESV---RQIHDRISGAA-SANVFLGNEIVRA 67
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCGSV A AF+ I K+ SW +M+ YA++G + AL L++ M ++P+ +
Sbjct: 68 YGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD---LQPNPVVY 124
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+L AC+ +E+G ++ G+ + ++ + + G L++A+ L + M
Sbjct: 125 TTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
++W A++ A Y ++ E+A + +M+ E
Sbjct: 185 GRRSVSSWNAMIAA---YAQSGHFEEAIRLYEDMDVE 218
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/571 (40%), Positives = 348/571 (60%), Gaps = 13/571 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN----YLAEAQRLFEEAPV 275
N+L+ + K + DA +FD +P RD V+W +++T +N L+ ++ L
Sbjct: 42 NTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFH 101
Query: 276 KDVFTWTAMVSG-------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
D F + ++V +V+ GK AR + + V +++I Y + D
Sbjct: 102 PDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVK-SSLIDMYAKFGLPDYG 160
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
R +F++++ N SW TMI+GYA+SG A LF + P + +W A+I+G QSG
Sbjct: 161 RAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGV 220
Query: 389 DSLRLFIEMKRYGERLNRS-PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
D+ LF+EM+ G + +SV+ CANLA ELGKQ+HG ++ +G+E+ F+ NAL
Sbjct: 221 DAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNAL 280
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KC + A + F E+ KDV+SW ++I G A+HG ++AL L++ M G+KP++
Sbjct: 281 IDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNE 340
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T VG++ ACSH GLV KG F +M D+G+ P+ +HYTC++DL R+G LDEA+NL++
Sbjct: 341 VTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIR 400
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP PD TW ALL +C+ +G T++A + A+ + ++PE+ Y+LLSN+YA +G W D
Sbjct: 401 TMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWED 460
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
VSKVR M KK GYS +++ H F G+T HP +D I + EL+ ++++ G+
Sbjct: 461 VSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGY 520
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
T VLHD+ ++EKE L +HSE+LAVAYG+L G IR++KNLRVC DCH +K
Sbjct: 521 APDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKL 580
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS I R I +RD R+HHF G+CSC D+W
Sbjct: 581 ISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 190/443 (42%), Gaps = 80/443 (18%)
Query: 16 LHQHTQSINRLQSPANTNPYPSKK----TLKRHLNSKSRNKPKPAGDWDIRQWNVAITTH 71
L Q QS +L S A +P +KK +K LN +++P P N + +
Sbjct: 3 LAQSLQS--QLCSAARQSPLLAKKLHAQIIKAGLN---QHEPIP---------NTLLNAY 48
Query: 72 MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ----LDPARQVFDQMPQRDLVSWN 127
+ G AL +F+++PRR V++ ++++ L+ + L +R + D +
Sbjct: 49 GKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFA 108
Query: 128 VMISG-------YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
++ +V+ AR DVV ++++ YA+ G D R +FD +
Sbjct: 109 SLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVK-SSLIDMYAKFGLPDYGRAVFDSI 167
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
N ISW +++ Y ++GR EA LF + +W +L+ G V+ DA +F
Sbjct: 168 SSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFV 227
Query: 241 RM-----PVRDEVS-------------W----------------------NTMITGYAQN 260
M V D + W N +I YA+
Sbjct: 228 EMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKC 287
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMI 316
+ L A+ +F E KDV +WT+++ G Q+G+ +EA ++D M + N V++ +I
Sbjct: 288 SDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLI 347
Query: 317 AGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMPQH-D 370
+ R LF M ++ + ++ +++SG + A NL MP + D
Sbjct: 348 HACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPD 407
Query: 371 CISWAAIIAGYAQSGYSEDSLRL 393
+WAA+++ + G ++ ++R+
Sbjct: 408 EPTWAALLSSCKRHGNTQMAVRI 430
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 33/191 (17%)
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
L K+LH Q++K G + N LL Y KCG +++A F+ + +D ++W +++
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL--VEKGTE----YFYSMNRDY 537
AL + S+ + G PD ++ AC++ G+ V++G + +F S D
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140
Query: 538 GVIP--------------------------NSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
V+ NS +T M+ R+GR EA L + P+
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200
Query: 572 EPDAATWGALL 582
+ W AL+
Sbjct: 201 R-NLFAWTALI 210
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 271/749 (36%), Positives = 418/749 (55%), Gaps = 68/749 (9%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISGYVRNKS------------ 138
+V N++++ Y G ++ AR+VFDQM RDLVSW M S RN +
Sbjct: 76 AVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEML 135
Query: 139 -----------LSAARNLFEMMPKR------------------DVVSWNTMLSGYAQNGY 169
+AAR F R DV ++ +A+NG
Sbjct: 136 ELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGD 195
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGG 225
AA+R+FD ++E+ + W L+ YVQ G + LF + + S +S++
Sbjct: 196 LVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISA 255
Query: 226 FVK--QKRLGDA-KWIFDRMP-VRDEVSWNTMITGYAQ---NNYLAEAQRLFEEAPVKDV 278
+ RLG + R+ V D ++ YA+ + A+++F+ P +V
Sbjct: 256 CTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNV 315
Query: 279 FTWTAMVSGYVQNGKVDEARM-IFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFE 333
+WTA++SGYVQ+G + M +F M + N ++++ ++ D R++
Sbjct: 316 MSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHA 375
Query: 334 AMTCKNVASWNT----MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+ ++A N +++ YA+SG + AR FD++ + + +S + + ++ +
Sbjct: 376 HVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDV----ETERNNA 431
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
S IE G ++ F S+LS A++ L G++LH +K GF + + N+L+
Sbjct: 432 SCSSKIEGMDDG--VSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVS 489
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY +CG +E+A AF+E+ D +VISW ++I+G A+HG+ K AL +F M G+KP+D+T
Sbjct: 490 MYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVT 549
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ +LSACSH GLV++G E+F SM +D+G++P +HY C+VDLL R+G ++EA+ + M
Sbjct: 550 YIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEM 609
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
P + DA W LL ACR YG TE+ E AA + +EP + YVLLSNLYA +G W +V+
Sbjct: 610 PCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVA 669
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
++R MRD+ + K TG SW++V N +H F GDT HP IYA L L ++K G+V
Sbjct: 670 RIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVP 729
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
T +VLHD+ EE KE L HSEK+AVA+G+++ A +P+R+ KNLRVC DCH+AIK+IS
Sbjct: 730 DTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYIS 789
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K GR IILRD+NRFH G CSCG+YW
Sbjct: 790 KSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 196/457 (42%), Gaps = 75/457 (16%)
Query: 64 WNVAITTHMRNGCCDSA----LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
W + IT +++ GC LH+ + S ++MIS G + +Q+
Sbjct: 214 WTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVAL 273
Query: 120 QRDLVSWNVMISGYV-------RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD- 171
+ LVS + + G V +S+ AR +F+ MP+ +V+SW ++SGY Q+G +
Sbjct: 274 RLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQEN 333
Query: 172 ----AARRIFDRMLEKNEISWNGLLAAYV-----QNGRIEEACMLFESKANWEVVSWNSL 222
R + + + N I+++ LL A +GR A +L S A+ VV N+L
Sbjct: 334 NVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVG-NAL 392
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ + + + +A+ FD++ + +S + + N + ++ FT+
Sbjct: 393 VSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGV--STFTFA 450
Query: 283 AMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+++S G + G+ A + +S N++++ Y + ++ A F+ M
Sbjct: 451 SLLSAAASVGLLTKGQKLHALSMKAGFRSDQGIS-NSLVSMYARCGYLEDACRAFDEMKD 509
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
NV SW ++I+G A+ GY++ +L +F +M
Sbjct: 510 HNVISWTSIISG-------------------------------LAKHGYAKQALSMFHDM 538
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQL-------HGQLVKVGFEAGCFVGNALLVM 450
G + N + +VLS C+++ ++ GK+ HG L ++ A C V +
Sbjct: 539 ILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYA-CIVD-----L 592
Query: 451 YCKCGSVEEAYHAFEEIVDK-DVISWNTMIAGYARHG 486
+ G VEEA E+ K D + W T+++ +G
Sbjct: 593 LARSGLVEEARQFINEMPCKADALVWKTLLSACRTYG 629
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 12/213 (5%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD- 469
+L++ A L LG+ LH +L++ + V N+LL MY KCG+VE A F+++
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+D++SW M + AR+G +++L L M +G++P+ T+ AC L
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165
Query: 530 FYSMNRDYGVIPNSKHYTC-MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
G C ++D+ R G L AQ + + E + W L+ Y
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL-IERTSVVWTLLITR---Y 221
Query: 589 GKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+ A K E+ M EP+ M ++S
Sbjct: 222 VQAGCASKVVELFLHMLDDGFEPDGYSMSSMIS 254
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/699 (35%), Positives = 392/699 (56%), Gaps = 47/699 (6%)
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLS 162
+D R++F+ + + WN+MI Y++ S A L++ M D ++ ++
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 163 GYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
+ A+++ + +L + + N L+ + + +AC +F + + VS
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVS 146
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
WNS++ G+++ + +AK I+ +MP R ++ N+MI + + EA +LF+E KD+
Sbjct: 147 WNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDM 206
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS-------------------- 311
TW+A+++ + QN +EA F M E VS
Sbjct: 207 VTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSL 266
Query: 312 ------------WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
NA+I Y + + +AR+LF+ ++ SWN+MI+GY + + +A
Sbjct: 267 SLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNA 326
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+ +FD MP+ D +SW+++I+GYAQ+ +++L LF EM+ G + + + SV+S CA L
Sbjct: 327 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 386
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+LE GK +H + + G +G L+ MY KCG VE A F +++K + +WN +I
Sbjct: 387 AALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALI 446
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
G A +G + +L +F +MK + P++IT +G+L AC H GLV++G +FYSM D+ +
Sbjct: 447 LGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKI 506
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
PN KHY CMVDLLGRAG+L EA+ L+ MP PD ATWGALLGAC+ +G +E+ +
Sbjct: 507 QPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGR 566
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E++P++ G +VLLSN+YA+ G+W DV ++R M V K+ G S +E +H F
Sbjct: 567 KLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFL 626
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD HP+ D I L E+ KLK +G+ VL DV EEEKE L HSEKLA+A+G
Sbjct: 627 AGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFG 686
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+++I PIR+MKNLR+C DCH A K ISK R I+
Sbjct: 687 LINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVF 725
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 214/455 (47%), Gaps = 69/455 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN + ++ G + A H+++ MP RS ++ N+MI + + G + A ++FD+M
Sbjct: 143 DSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEML 202
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARR 175
++D+V+W+ +I+ + +N+ A F M K D V + LS A + +
Sbjct: 203 EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKL 262
Query: 176 IFDRMLEKNEISW----NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
I L+ S+ N L+ Y + G I A LF+ +++SWNS++ G++K
Sbjct: 263 IHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNL 322
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSG 287
+ +AK IFD MP +D VSW++MI+GYAQN+ E LF+E + D T +++S
Sbjct: 323 VDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISA 382
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNA-----MIAGYVQTKRMDMARELFEAMTCKNVAS 342
+ +++ + + A ++N ++ N +I Y++ ++ A E+F M K +++
Sbjct: 383 CARLAALEQGKWV-HAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIST 441
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN +I G A +G + E SL +F MK+
Sbjct: 442 WNALILGLAMNGLV-------------------------------ESSLDMFSNMKKCHV 470
Query: 403 RLNRSPFTSVLSTCANLASLELGKQ-----LHGQLVKVGFEA-GCFVGNALLVMYCKCGS 456
N F VL C ++ ++ G+ +H ++ + GC V + + G
Sbjct: 471 TPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVD-----LLGRAGK 525
Query: 457 VEEAYHAFEEIVDK-----DVISWNTMIAGYARHG 486
++EA EE++++ DV +W ++ +HG
Sbjct: 526 LQEA----EELLNRMPMTPDVATWGALLGACKKHG 556
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 51/281 (18%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNV 128
+M + C D A +F+ +S+N+MISGYL +D A+ +FD MP++D+VSW+
Sbjct: 284 YMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSS 343
Query: 129 MISGYVRNKSLSAARNLFEMMP----------------------------------KRDV 154
MISGY +N LF+ M KR+
Sbjct: 344 MISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNG 403
Query: 155 VSWN-----TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
++ N T++ Y + G + A +F M+EK +WN L+ NG +E + +F
Sbjct: 404 LTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFS 463
Query: 210 SKANWEV----VSWNSLMG-----GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ V +++ ++G G V + + I D + + M+ +
Sbjct: 464 NMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRA 523
Query: 261 NYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMI 300
L EA+ L P+ DV TW A++ ++G + R +
Sbjct: 524 GKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 564
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 270/757 (35%), Positives = 399/757 (52%), Gaps = 97/757 (12%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE-MMPKRDVVSWNTMLSGYAQNGYA 170
R + + RD V N +++ Y R ++++ARN+F+ M RD+VSW M S A+NG
Sbjct: 73 RLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAE 132
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE--------------SKANW-- 214
+ + MLE +GLL AC E W
Sbjct: 133 RGSLLLIGEMLE------SGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---- 270
+V ++L+ + L A+ +FD + + V W +I+ Y Q EA LF
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKV------------------------------------ 294
E+ D +T ++M+S + G V
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306
Query: 295 --DEARMIFDAMPEKNTVSWNAMIAGYVQT-----KRMDMARELFEAMTCKNVASWNTMI 347
D A +F+ MP+ + +SW A+I+GYVQ+ K M + E+ N ++++++
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSIL 366
Query: 348 TGYAQ-----SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM----- 397
A SG HA + + A+++ YA+SG E++ R+F ++
Sbjct: 367 KSCASISDHDSGRQVHAHVIKSNQASAHTVG-NALVSMYAESGCMEEARRVFNQLYERSM 425
Query: 398 ----------------KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
R ++ S F S++S A++ L G+QLH +K GF +
Sbjct: 426 IPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDR 485
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
FV N+L+ MY +CG +E+A +F E+ D++VISW +MI+G A+HG+ + AL LF M
Sbjct: 486 FVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILT 545
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G+KP+D+T + +LSACSH GLV +G EYF SM RD+G+IP +HY CMVDLL R+G + E
Sbjct: 546 GVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKE 605
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A + MP + DA W LLGACR + E+ E A+ + E+EP + YVLLSNLYA
Sbjct: 606 ALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYAD 665
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
+G W +V+++R MRD + K TG SW+EV+N H F GDT HP IY L+ L +
Sbjct: 666 AGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQ 725
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
+K G+V T +VLHD+ +E KE L HSEK+AVA+G+++ A +PIR+ KNLRVC DC
Sbjct: 726 IKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADC 785
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H+AIK++SK R IILRD+NRFH G CSCG+YW
Sbjct: 786 HSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 186/424 (43%), Gaps = 67/424 (15%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
W + I+ +++ C + A+ +F P R ++S +MIS G + Q+
Sbjct: 222 WTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMS--SMISACTELGSVRLGLQLHSL 279
Query: 118 MPQRDLVSWNVMISGYVR-------NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ L S + G V +++ A +FE MPK DV+SW ++SGY Q+G
Sbjct: 280 ALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQ 339
Query: 171 D-AARRIFDRMLEK----NEISWNGLLAAYVQ-----NGRIEEACMLFESKANWEVVSWN 220
+ +F ML + N I+++ +L + +GR A ++ ++A+ V N
Sbjct: 340 ENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVG-N 398
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEV-------------------------SWNTMIT 255
+L+ + + + +A+ +F+++ R + ++ ++I+
Sbjct: 399 ALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLIS 458
Query: 256 GYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
A L + Q+L + D F ++VS Y + G +++A F+ + ++N +S
Sbjct: 459 AAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS 518
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMP 367
W +MI+G + + A LF M V ++ +++ + G + + F M
Sbjct: 519 WTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQ 578
Query: 368 Q-HDCIS----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
+ H I +A ++ A+SG +++L EM + L + ++L C + ++
Sbjct: 579 RDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADAL---VWKTLLGACRSHDNI 635
Query: 423 ELGK 426
E+G+
Sbjct: 636 EVGE 639
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 422 LELGKQLHGQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD-KDVISWNTMI 479
L LG+ LH +L++ + V N+LL +Y +CG+V A + F+ + +D++SW M
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
+ AR+G + +L+L M G+ P+ T+ AC L + G+
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 540 IPNSKHY-TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ ++D+L R G L A+ + + E W L+ Y + E AE+A
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLISR---YVQGECAEEAV 239
Query: 599 EVIFE-----MEPENAGMYVLLS 616
E+ + EP+ M ++S
Sbjct: 240 ELFLDFLEDGFEPDRYTMSSMIS 262
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 51/326 (15%)
Query: 26 LQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFN 85
L+S A+ + + S + + H+ ++ G N ++ + +GC + A VFN
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVG-------NALVSMYAESGCMEEARRVFN 418
Query: 86 SMPRRS-------------------------SVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ RS S ++ ++IS G L +Q+ +
Sbjct: 419 QLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLK 478
Query: 121 ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
D N ++S Y R L A F + R+V+SW +M+SG A++GYA+ A +
Sbjct: 479 AGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSL 538
Query: 177 FDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKAN-----WEVVSWNSLMGGFV 227
F M+ + N++++ +L+A G + E F S + + ++
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLA 598
Query: 228 KQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYLA----EAQRLFEEAPVKDVFTWT 282
+ + +A + MP++ D + W T++ ++ + A+ + E P +D +
Sbjct: 599 RSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEP-RDPAPYV 657
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKN 308
+ + Y G DE I AM + N
Sbjct: 658 LLSNLYADAGLWDEVARIRSAMRDNN 683
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 264/737 (35%), Positives = 406/737 (55%), Gaps = 89/737 (12%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKN 184
++S + R S+ A +FE + K+ V + TML G+A+ D A + F RM +E
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134
Query: 185 EISWNGLLA-----AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
++ LL A ++ G+ E +L +S + ++ + L + K +++ +A+ +F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGK-EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVF 193
Query: 240 DRMPVRDEVSWNTMITGYAQNNYL---AEAQRLFEEAPVKDVFTW--------------- 281
DRMP RD VSWNT++ GY+QN E L E +K F
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIR 253
Query: 282 ---------------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
TA+V Y + G + AR++FD M E+N VSWN+MI YV
Sbjct: 254 IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313
Query: 321 QTKRMDMARELFEAM-----------------TC----------------------KNVA 341
Q + A +F+ M C +NV+
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVS 373
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N++I+ Y + E+ A ++F ++ +SW A+I G+AQ+G ++L F +M+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQART 433
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ + + SV++ A L+ K +HG +++ + FV AL+ MY KCG++ A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + ++ V +WN MI GY HG GK AL LFE M+ I+P+ +T + ++SACSH+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSG 553
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE G + F+ M +Y + P+ HY MVDLLGRAGRL+EA + + MP +P +GA+
Sbjct: 554 LVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGAC+++ AEK AE +FE+ PE+ G +VLL+N+Y A+ W V +VR+ M +G++
Sbjct: 614 LGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G S +E++N+VH+F G T HP +IYA+LE+L ++K+ G+V T L+L + ++
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDD 732
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
KE +L HSEKLA+++G+L+ AG I V KNLRVC DCHNA K+IS + GR II+RD
Sbjct: 733 VKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDM 792
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHHF G+CSCGDYW
Sbjct: 793 QRFHHFKNGACSCGDYW 809
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 219/477 (45%), Gaps = 52/477 (10%)
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
IF L + + L++ + + G ++EA +FE V + +++ GF K L A
Sbjct: 60 IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKA 119
Query: 236 KWIFDRM------PVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSG 287
F RM PV ++ + G A+ E L ++ D+F T + +
Sbjct: 120 LKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV------- 340
Y + +V EAR +FD MPE++ VSWN ++AGY Q MA E+ M +N+
Sbjct: 180 YAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITI 239
Query: 341 -------------------------ASWNTMIT-------GYAQSGEITHARNLFDRMPQ 368
A +++++ YA+ G + AR LFD M +
Sbjct: 240 VSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLE 299
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ +SW ++I Y Q+ ++++ +F +M G + L CA+L LE G+ +
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H V++ + V N+L+ MYCKC V+ A F ++ + ++SWN MI G+A++G
Sbjct: 360 HKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRP 419
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+AL F M+ +KPD T V +++A + + ++ + + + N T
Sbjct: 420 IEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRNCLDKNVFVTTA 478
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+VD+ + G + A+ L+ +M E TW A++ YG + + A E+ EM+
Sbjct: 479 LVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDG---YGTHGIGKAALELFEEMQ 531
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 168/382 (43%), Gaps = 90/382 (23%)
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV-VSWNTMLS--- 162
Q+ AR+VFD+MP+RDLVSWN +++GY +N A + +M + ++ S+ T++S
Sbjct: 185 QVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLP 244
Query: 163 -----------------------------------GYAQNGYADAARRIFDRMLEKNEIS 187
YA+ G AR +FD MLE+N +S
Sbjct: 245 AVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVS 304
Query: 188 WNGLLAAYVQNGRIEEACMLF--------------------------------------- 208
WN ++ AYVQN +EA ++F
Sbjct: 305 WNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
E + + V NSL+ + K K + A +F ++ R VSWN MI G+AQN EA
Sbjct: 365 ELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALN 424
Query: 269 LFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYV 320
F + + D FT+ ++++ + A+ I + +KN A++ Y
Sbjct: 425 YFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYA 484
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ----HDCISWAA 376
+ + +AR +F+ M+ ++V +WN MI GY G A LF+ M + + +++ +
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLS 544
Query: 377 IIAGYAQSGYSEDSLRLFIEMK 398
+I+ + SG E L+ F MK
Sbjct: 545 VISACSHSGLVEAGLKCFHMMK 566
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 20/297 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
A++ Y G L AR +FD M +R++VSWN MI YV+N++ A +F+ M V
Sbjct: 275 TALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVK 334
Query: 155 ---VSWNTMLSGYAQNGYADAARRI----FDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
VS L A G + R I + L++N N L++ Y + ++ A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYL 263
F + +VSWN+++ GF + R +A F +M R D ++ ++IT A+ +
Sbjct: 395 FGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSIT 454
Query: 264 AEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
A+ + K+VF TA+V Y + G + AR+IFD M E++ +WNAMI GY
Sbjct: 455 HHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514
Query: 320 VQTKRMDMARELFEAM---TCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
A ELFE M T + N ++ ++I+ + SG + F M ++ I
Sbjct: 515 GTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSI 571
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 113/270 (41%), Gaps = 53/270 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ N I+ + + D+A +F + R+ VS+NAMI G+ NG+ A F Q
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQ 428
Query: 118 MPQRDL----------------------VSW------------NVMISG-----YVRNKS 138
M R + W NV ++ Y + +
Sbjct: 429 MQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGA 488
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ AR +F+MM +R V +WN M+ GY +G AA +F+ M + N +++ +++A
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISA 548
Query: 195 YVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVS 249
+G +E F K N+ + G V + RL +A +MPV+ V+
Sbjct: 549 CSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 250 WNTMITGYAQ---NNYLAE--AQRLFEEAP 274
+ G Q N AE A+RLFE P
Sbjct: 609 VYGAMLGACQIHKNVNFAEKVAERLFELNP 638
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 22/260 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
N++IS Y ++D A +F ++ R +VSWN MI G+ +N A N F M R
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVK 435
Query: 153 -DVVSWNTMLSGYAQNGYADAAR----RIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
D ++ ++++ A+ A+ + L+KN L+ Y + G I A ++
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM---PVR-DEVSWNTMITGYAQNNYL 263
F+ + V +WN+++ G+ A +F+ M +R + V++ ++I+ + + +
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLV 555
Query: 264 AEAQRLFEEA-------PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAM 315
+ F P D + AMV + G+++EA MP K V+ + AM
Sbjct: 556 EAGLKCFHMMKENYSIEPSMD--HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 316 IAGYVQTKRMDMARELFEAM 335
+ K ++ A ++ E +
Sbjct: 614 LGACQIHKNVNFAEKVAERL 633
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/506 (44%), Positives = 323/506 (63%), Gaps = 4/506 (0%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGYVQTKRMDMARELF 332
D F ++V YV+ G++ +FD P++N WN +I G + + A LF
Sbjct: 172 DSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLF 231
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
EAM +N SWN++I G+ ++G++ AR LF +MP+ + +SW +I G++Q+G E +L
Sbjct: 232 EAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALS 291
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
+F M G R N S L C + +L++G+++H L GF+ +G AL+ MY
Sbjct: 292 MFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYA 351
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCG+++ A F E KD+++W+ MI G+A HG AL F MK+ GI PD++ +
Sbjct: 352 KCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLA 411
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
IL+ACSH+G V++G +F SM DY + P KHYT +VDLLGRAGRLDEA + +++MP
Sbjct: 412 ILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPIN 471
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
PD WGAL ACR + E+AE AE + ++EP++ G YV LSN+YAA GRW DV +VR
Sbjct: 472 PDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVR 531
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
M++RGV+K G+S++EV+ +VH+F GD H + I LEE+ KQ+G++ T
Sbjct: 532 TLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETA 591
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLH++ EEEKE L HSEKLA+A+G++S G IR++KNLRVC DCH+ +K+ SK+
Sbjct: 592 WVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLS 651
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R IILRD RFHHF G+CSCGDYW
Sbjct: 652 RREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 30/310 (9%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRD----LVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
+++ Y+ G+L Q+FD+ PQR+ ++ WNV+I+G + LS A +LFE MP+R
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPER 237
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
+ SWN++++G+ +NG D AR +F +M EKN +SW ++ + QNG E+A +F
Sbjct: 238 NAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRML 297
Query: 213 NWEVVSWNSL--MGGFVKQKRLGDAKWIFDRMPVRDEVSWN----------TMITGYAQN 260
E V N L + + ++G A + +R + + +S N ++ YA+
Sbjct: 298 E-EGVRPNDLTVVSALLACTKIG-ALQVGER--IHNYLSSNGFQLNRGIGTALVDMYAKC 353
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMI 316
+ A R+F E KD+ TW+ M+ G+ +G D+A F M + V + A++
Sbjct: 354 GNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAIL 413
Query: 317 AGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMP-QHD 370
+ +D FE+M + + ++ ++G + A + MP D
Sbjct: 414 TACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPD 473
Query: 371 CISWAAIIAG 380
+ W A+
Sbjct: 474 FVIWGALFCA 483
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 204/507 (40%), Gaps = 103/507 (20%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+IS KSL A ++F ++ +N ++ G A+N + + F ML + I
Sbjct: 78 LISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLML-RLSIRP 136
Query: 189 NGLLAAYVQN----------GRIEEACMLFESKANWEVVSW--NSLMGGFVKQKRLGDAK 236
+ L +V GR ++ K E S+ SL+ +VK LG
Sbjct: 137 DRLTLPFVLKSVAALVDVGLGRCLHGGVM---KLGLEFDSFVRVSLVDMYVKIGELGFGL 193
Query: 237 WIFDRMPVRDEVS----WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
+FD P R++ WN +I G + L++A LFE P ++ +W ++++G+V+NG
Sbjct: 194 QLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNG 253
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF-----------------EAM 335
+D AR +F MPEKN VSW MI G+ Q + A +F +
Sbjct: 254 DLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALL 313
Query: 336 TCKNVASWNT----------------------MITGYAQSGEITHARNLFDRMPQHDCIS 373
C + + ++ YA+ G I A +F D ++
Sbjct: 314 ACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLT 373
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W+ +I G+A G + +L+ F++MK G + F ++L+ C++ +++ G
Sbjct: 374 WSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNF----- 428
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
FE ++ + Y S+E + IVD R G +AL
Sbjct: 429 ---FE-------SMRLDY----SIEPTMKHYTLIVDL-----------LGRAGRLDEALS 463
Query: 494 LFESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
+SM I PD + + AC + + E E + + P S Y +
Sbjct: 464 FIQSMP---INPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKH---PGS--YVFLS 515
Query: 551 DLLGRAGR---LDEAQNLMKNMPFEPD 574
++ GR ++ + LMKN E D
Sbjct: 516 NVYAAVGRWEDVERVRTLMKNRGVEKD 542
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 141/305 (46%), Gaps = 33/305 (10%)
Query: 47 SKSRNKPKPAGDWDIRQWNVAITTHMRNGCC-----DSALHVFNSMPRRSSVSYNAMISG 101
S RNK + I WNV I NGCC A +F +MP R++ S+N++I+G
Sbjct: 199 SPQRNKAE-----SILLWNVLI-----NGCCKVGDLSKAASLFEAMPERNAGSWNSLING 248
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSW 157
++ NG LD AR++F QMP++++VSW MI+G+ +N A ++F M + V ++
Sbjct: 249 FVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTV 308
Query: 158 NTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
+ L + G RI + + + N L+ Y + G I+ A +F
Sbjct: 309 VSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKG 368
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL 269
++++W+ ++ G+ A F +M DEV + ++T + + + +
Sbjct: 369 KDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNF 428
Query: 270 FEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTK 323
FE + + +T +V + G++DEA +MP + V W A+ K
Sbjct: 429 FESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHK 488
Query: 324 RMDMA 328
++MA
Sbjct: 489 NIEMA 493
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 126/316 (39%), Gaps = 47/316 (14%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+RSP T + +L Q+H Q+ + V L+ C S++ A F
Sbjct: 36 SRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIF 95
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA-------- 516
++ +N +I G A + + ++ F M + I+PD +T+ +L +
Sbjct: 96 RCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVG 155
Query: 517 ---CSHTGLVEKGTEY-------FYSMNRDYGVI----------PNSKH------YTCMV 550
C H G+++ G E+ M G + P + ++
Sbjct: 156 LGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLI 215
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
+ + G L +A +L + MP E +A +W +L+ + + ++A E+ +M +N
Sbjct: 216 NGCCKVGDLSKAASLFEAMP-ERNAGSWNSLING---FVRNGDLDRARELFVQMPEKNVV 271
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK--VTGYSWLEVQNKVHTFSVGDTLHPEK 668
+ + N ++ +G + +M + GV+ +T S L K+ VG
Sbjct: 272 SWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVG------- 324
Query: 669 DRIYAYLEELEFKLKQ 684
+RI+ YL F+L +
Sbjct: 325 ERIHNYLSSNGFQLNR 340
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 276/786 (35%), Positives = 434/786 (55%), Gaps = 44/786 (5%)
Query: 24 NRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHV 83
N LQ + K+L H+ K D+ N+ + T++ G + A +
Sbjct: 8 NMLQQAIRNRDPNAGKSLHCHI-------LKHGASLDLFAQNILLNTYVHFGFLEDASKL 60
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQV----------FDQMPQRDLVSWNVMISGY 133
F+ MP ++VS+ + G+ + Q AR++ +Q L+ +++S
Sbjct: 61 FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLL--KLLVSMD 118
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
+ + LS ++++ + D ++ Y+ G DAAR++FD + K+ +SW G++A
Sbjct: 119 LADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVA 178
Query: 194 AYVQNGRIEEACMLF-----------ESKANWEVVSWNSLMGGFVKQKRLGDA-KWIFDR 241
Y +N E++ +LF + + S N L V + G A K +DR
Sbjct: 179 CYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDR 238
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
D ++ Y ++ +AEAQ+ FEE P D+ W+ M+S Y Q+ K EA +F
Sbjct: 239 ----DLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELF 294
Query: 302 DAMPEKNTV-----SWNAMIAGYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQ 352
M + + V ++ +++ +++ ++ + NV N ++ YA+
Sbjct: 295 CRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAK 354
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
GEI ++ LF + + ++W II GY Q G E +L LF M + ++SV
Sbjct: 355 CGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSV 414
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L A+L +LE G+Q+H +K + V N+L+ MY KCG +++A F+++ +D
Sbjct: 415 LRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDE 474
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWN +I GY+ HG G +AL LF+ M+ KP+ +T VG+LSACS+ GL++KG +F S
Sbjct: 475 VSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKS 534
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M +DYG+ P +HYTCMV LLGR+G+ DEA L+ +PF+P W ALLGAC ++ +
Sbjct: 535 MLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLD 594
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
L + A+ + EMEP++ +VLLSN+YA + RW +V+ VR M+ + VKK G SW+E Q
Sbjct: 595 LGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQ 654
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
VH F+VGDT HP I+A LE L K + G+V +VL DV ++EKE +L HSE
Sbjct: 655 GVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSE 714
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
+LA+A+G++ IP+G IR++KNLR+C DCH IK +SKIV R I++RD NRFHHF G C
Sbjct: 715 RLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVC 774
Query: 773 SCGDYW 778
SCGDYW
Sbjct: 775 SCGDYW 780
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 234/500 (46%), Gaps = 76/500 (15%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLF 208
D S+ ML +N +A + + +L+ + + N LL YV G +E+A LF
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDA---------------KWIFDRMPVRDEVSWNTM 253
+ VS+ +L GF + + A +++F + ++ VS +
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTL-LKLLVSMDLA 120
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
T + + Y+ +L +A D F TA++ Y G VD AR +FD + K+ VSW
Sbjct: 121 DTCLSVHAYV---YKLGHQA---DAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWT 174
Query: 314 AMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWNT----------- 345
M+A Y + + + LF M +C + ++
Sbjct: 175 GMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKV 234
Query: 346 -----------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
++ Y +SGEI A+ F+ MP+ D I W+ +I+ YAQS S+++L LF
Sbjct: 235 CYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELF 294
Query: 395 IEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
M++ + N F SVL CA+L L LG Q+H ++KVG ++ FV NAL+ +Y K
Sbjct: 295 CRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAK 354
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG +E + F +K+ ++WNT+I GY + G G+ AL LF +M + I+P ++T +
Sbjct: 355 CGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSV 414
Query: 514 LSACSHTGLVEKGTEY----FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
L A + +E G + +M V+ NS ++D+ + GR+D+A+ M
Sbjct: 415 LRASASLVALEPGRQIHSLTIKTMYNKDSVVANS-----LIDMYAKCGRIDDARLTFDKM 469
Query: 570 PFEPDAATWGALLGACRLYG 589
+ D +W AL+ ++G
Sbjct: 470 D-KQDEVSWNALICGYSIHG 488
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/556 (41%), Positives = 356/556 (64%), Gaps = 4/556 (0%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQ 197
++ AR LF+ +P+RDVV+W +++GY + G AR +FDR+ KN ++W +++ Y++
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR 121
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ ++ A MLF+ VVSWN+++ G+ + R+ A +FD MP R+ VSWN+M+
Sbjct: 122 SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKAL 181
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
Q + EA LFE P +DV +WTAMV G +NGKVDEAR +FD MPE+N +SWNAMI
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMIT 241
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
GY Q R+D A +LF+ M ++ ASWNTMITG+ ++ E+ A LFDRMP+ + ISW +
Sbjct: 242 GYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTM 301
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
I GY ++ +E++L +F +M R G + N + S+LS C++LA L G+Q+H + K
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGYARHGFGKDALML 494
+ V +ALL MY K G + A F+ + +D+ISWN+MIA YA HG GK+A+ +
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
+ M+ G KP +T + +L ACSH GLVEKG E+F + RD + +HYTC+VDL G
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCG 481
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAGRL + N + + +GA+L AC ++ + +A++ + + E ++AG YVL
Sbjct: 482 RAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVL 541
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
+SN+YAA+G+ + +++R+KM+++G+KK G SW++V + H F VGD HP+ + + +
Sbjct: 542 MSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSI 601
Query: 675 LEELEFKLKQDGFVYS 690
L +L K++++ V S
Sbjct: 602 LSDLRNKMRKNKNVTS 617
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 249/437 (56%), Gaps = 50/437 (11%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
L R + S S P +W I + + G A +F+ +P R V++ +I+
Sbjct: 33 LVRSIYSSSSRPRVPQPEWLIGEL-------CKVGKIAEARKLFDGLPERDVVTWTHVIT 85
Query: 101 GYLLNGQLDPARQVFDQMPQR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
GY+ G + AR++FD++ R ++V+W M+SGY+R+K LS A LF+ MP+R+VVSWNT
Sbjct: 86 GYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNT 145
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
M+ GYAQ+G D A +FD M E+N +SWN ++ A VQ GRI+EA LFE +VVSW
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSW 205
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
+++ G K ++ +A+ +FD MP R+ +SWN MITGYAQNN + EA +LF+ P +D
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA 265
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---- 335
+W M++G+++N ++++A +FD MPEKN +SW MI GYV+ K + A +F M
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 336 -------------------------------TCKNVASWNTMITG-----YAQSGEITHA 359
K+V N ++T Y++SGE+ A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 360 RNLFDR--MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
R +FD + Q D ISW ++IA YA G+ ++++ ++ +M+++G + + + ++L C+
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 418 NLASLELGKQLHGQLVK 434
+ +E G + LV+
Sbjct: 446 HAGLVEKGMEFFKDLVR 462
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 17/257 (6%)
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ R ++ + + V +I + G+I AR LFD +P+ D ++W +I GY + G
Sbjct: 32 NLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLG 91
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
++ LF R R N +T+++S L + + L ++ E N
Sbjct: 92 DMREARELF---DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWN 144
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
++ Y + G +++A F+E+ +++++SWN+M+ + G +A+ LFE M +
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RR 200
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D ++ ++ + G V++ F M N + M+ + R+DEA L
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPE-----RNIISWNAMITGYAQNNRIDEADQL 255
Query: 566 MKNMPFEPDAATWGALL 582
+ MP E D A+W ++
Sbjct: 256 FQVMP-ERDFASWNTMI 271
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/671 (38%), Positives = 385/671 (57%), Gaps = 25/671 (3%)
Query: 131 SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK------N 184
S V + L A +F+ P R + +W +++SG A+ G R F ML++ N
Sbjct: 66 SSSVIARGLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPN 125
Query: 185 EISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
G+L G +E + S +VV N+++ + K G A+ F
Sbjct: 126 AFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFG 185
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA--- 297
M +D SWN +I Q+ L A +LF+E+ ++DV +W +VSG +++G EA
Sbjct: 186 AMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGR 245
Query: 298 --RMIFDAMPEKN-TVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGY 350
+M+ + N T S +AG + ++ D+ R+L A+ ++ +++ Y
Sbjct: 246 LQQMVRAGVTFSNYTYSMVFALAGLLSSR--DLGRQLHGRVVVAVLEEDAFVGCSLMDMY 303
Query: 351 AQSGEITHARNLFDR---MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
+ GE+ A ++FDR + +W+ ++AGY Q+G E++L F M R G +
Sbjct: 304 CKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQF 363
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
TSV S CAN +E G+Q+HG + K+G + +A++ MY K GS+E+A F
Sbjct: 364 ILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSA 423
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
K+V W TM+ YA HG G+ AL +F MK I P++IT+V +LSACSH+GLV G
Sbjct: 424 QTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGY 483
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
YF M +YG++PN++HY CMVDL GRAG LD+A+N ++ +A W LL ACRL
Sbjct: 484 HYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRL 543
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+ E A+ A+E + ++E +AG YVL+SN+YA + +W D K+R M++R V+K G S
Sbjct: 544 HKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQS 603
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
W+ ++N VH F DT HP IYAYLE+L +LK+ G+ T LV+HD+ EE++E L
Sbjct: 604 WIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSL 663
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
++HSEKLA+A+GI+S P G +R+ KNLRVCEDCH AIK I++ R I++RD RFHHF
Sbjct: 664 KFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHF 723
Query: 768 SGGSCSCGDYW 778
G CSC D+W
Sbjct: 724 KDGQCSCEDFW 734
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 147/337 (43%), Gaps = 38/337 (11%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA++ Y G AR+ F M Q+D SWN++I +++ L A LF+ RDV
Sbjct: 165 NAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVS 224
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN----------GLLAA----YVQNGRI 201
SWNT++SG ++G+ A +M+ N GLL++ +GR+
Sbjct: 225 SWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRV 284
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR---MPVRDEVSWNTMITGYA 258
A + + SLM + K + A IFDR + +W+TM+ GY
Sbjct: 285 VVAVL------EEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYV 338
Query: 259 QNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
QN EA +R+ E F T++ S G V++ R + EK ++A
Sbjct: 339 QNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQV-HGFVEKLGHRFDA 397
Query: 315 MIAG-----YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
+A Y ++ ++ A +F + KNVA W TM+ YA G+ A +F RM
Sbjct: 398 PLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAE 457
Query: 370 DC----ISWAAIIAGYAQSGYSEDSLRLFIEMK-RYG 401
I+ A+++ + SG D F M+ YG
Sbjct: 458 KIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYG 494
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 194/476 (40%), Gaps = 74/476 (15%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRN-KSLSAARNLFEMMPK--------------- 151
L A +VFD P R L +W +ISG R + R EM+ +
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 152 -------------------------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
DVV N +L YA+ G ARR F M +K+
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
SWN ++ A +Q+G + A LF+ + +V SWN+++ G ++ +A +M VR
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQM-VRA 252
Query: 247 EVSWN--TMITGYAQNNYLAEAQ-------RLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
V+++ T +A L+ R+ +D F +++ Y + G+++ A
Sbjct: 253 GVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESA 312
Query: 298 RMIFDA---MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ-- 352
IFD E +W+ M+AGYVQ R + A E F M + V + ++T A
Sbjct: 313 LSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASAC 372
Query: 353 --SGEITHARNLFDRMPQ----HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+G + R + + + D +AI+ Y++SG ED+ R+F R + N
Sbjct: 373 ANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIF----RSAQTKNV 428
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF-- 464
+ +T++L + A+ + ++ ++ A+L G V + YH F
Sbjct: 429 ALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNL 488
Query: 465 ---EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E + + +N M+ Y R G A E K I + + +LSAC
Sbjct: 489 MQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENK---ISHEAVVWKTLLSAC 541
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 167/406 (41%), Gaps = 67/406 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + + + G A F +M ++ + S+N +I L +G L A Q+FD+
Sbjct: 160 DVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESS 219
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN--------------------- 158
RD+ SWN ++SG +R+ + A + M + V N
Sbjct: 220 LRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQ 279
Query: 159 ------------------TMLSGYAQNGYADAARRIFDR---MLEKNEISWNGLLAAYVQ 197
+++ Y + G ++A IFDR E + +W+ ++A YVQ
Sbjct: 280 LHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQ 339
Query: 198 NGRIEEACMLFESKANWEVVSWNSLM---------GGFVKQKRLGDAKWIFDRMPVR-DE 247
NGR EEA F V + ++ G V+Q R +++ R D
Sbjct: 340 NGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGR--QVHGFVEKLGHRFDA 397
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+ ++ Y+++ L +A R+F A K+V WT M+ Y +G+ A IF M +
Sbjct: 398 PLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAE 457
Query: 308 ----NTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITH 358
N ++ A+++ + + F M N +N M+ Y ++G +
Sbjct: 458 KIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDK 517
Query: 359 ARNLFDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMKRY 400
A+N + H+ + W +++ + Y++ + +++++Y
Sbjct: 518 AKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQY 563
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/536 (43%), Positives = 343/536 (63%), Gaps = 13/536 (2%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMPEK 307
+I Y++ + ++FEE+ K TW++++S + QN + A RMI + +
Sbjct: 95 LINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPD 154
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNL 362
+ + +A A + R D+ + + + K +V ++++ YA+ G+I ARN+
Sbjct: 155 DHIFPSATKACAI-LGRCDVGKSV-HCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNV 212
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD MP + +SW+ +I GY Q G E+++RLF E G +N +SV+ C + L
Sbjct: 213 FDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLL 272
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
ELGKQ+HG K ++ FVG++L+ +Y KCG +E AY F+E+ K++ WN M+
Sbjct: 273 ELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIAC 332
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A+H K+A LF M+ G++P+ IT + +L ACSH GLVE+G +YF M + Y + P
Sbjct: 333 AQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKK-YEIEPG 391
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
++HY MVDLLGRAG+L EA +++K MP EP + WGA + CR++G T+LA AA+ +F
Sbjct: 392 TQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVF 451
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+ ++G++V+LSN YAA+GR+ D +K R +RDRGVKK TG SW+E N+VH F+ GD
Sbjct: 452 ELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGD 511
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
H IY LE+L ++++ G+V T VL +VG EEK +RYHSE+LA+A+G++S
Sbjct: 512 RFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLIS 571
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IP GRPIR+MKNLRVC DCHNAIK ISK+ GR+II+RDNNRFH F G CSC DYW
Sbjct: 572 IPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 177/402 (44%), Gaps = 51/402 (12%)
Query: 103 LLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLS 162
LL GQ A + + LV + +I+ Y + + + +FE ++ +W++++S
Sbjct: 70 LLKGQQIHAHIIKSGLQVIPLVC-HYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN----GRIEEA----CMLFESKANW 214
+AQN A + F RM+ +N + + + + GR + C++ ++ +
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+V +SL+ + K + +A+ +FD MP R+ VSW+ MI GY Q EA RLF+EA
Sbjct: 189 DVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEAL 248
Query: 275 VKDV----FTWTAMV-----SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
++ + FT ++++ + ++ GK + F + + +++I+ Y + +
Sbjct: 249 LEGLDVNDFTLSSVIRVCGSATLLELGKQIHG-LCFKTSYDLSGFVGSSLISLYSKCGLI 307
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ A +F+ + KN+ WN M+ AQ H + FD
Sbjct: 308 EGAYRVFDEVPIKNLGMWNAMLIACAQHA---HTKEAFD--------------------- 343
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
LF +M+ G R N F VL C++ +E GK+ + K E G
Sbjct: 344 -------LFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYA 396
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVIS-WNTMIAGYARHG 486
+++ + + G ++EA + + + S W I G HG
Sbjct: 397 SMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHG 438
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 25/279 (8%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + + + G A +VF+ MP R+ VS++ MI GY G+ + A +
Sbjct: 183 KTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMR 242
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT-----------MLS 162
+F + L + +S +R + + L E+ + + + T ++S
Sbjct: 243 LFKEALLEGLDVNDFTLSSVIR---VCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLIS 299
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVS 218
Y++ G + A R+FD + KN WN +L A Q+ +EA LF N ++
Sbjct: 300 LYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFIT 359
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEA 273
+ ++ + + K F M + E+ + +M+ + L EA + +
Sbjct: 360 FLCVLYACSHAGLVEEGKKYFALMK-KYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGM 418
Query: 274 PVKDVFT-WTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
P + + W A ++G +G D A D + E VS
Sbjct: 419 PTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVS 457
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 19/211 (9%)
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
++S F K+YG +L + SL G+Q+H ++K G + V + L
Sbjct: 42 QNSPNRFCSEKKYGH------ICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYL 95
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ Y K + FEE K +W+++I+ +A++ A+ F M + PDD
Sbjct: 96 INFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDD 155
Query: 508 ITMVGILSACSHTGLVEKGTE---YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
AC+ G + G D V S +VD+ + G + EA+N
Sbjct: 156 HIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSS----LVDMYAKCGDIKEARN 211
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+ MP + +W + +YG T+L E
Sbjct: 212 VFDEMPHR-NVVSWSGM-----IYGYTQLGE 236
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/640 (40%), Positives = 385/640 (60%), Gaps = 25/640 (3%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y G + AR+VFD+MPQR+ S+N ++S + L A N+F+ MP+ D
Sbjct: 58 NRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQC 117
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQ----NGRIEEACML 207
SWN M+SG+AQ+ + A R F M + NE S+ L+A N I+ ++
Sbjct: 118 SWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALI 177
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S+ +V ++L+ + K + A+ FD M VR+ VSWN++IT Y QN +A
Sbjct: 178 SKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKAL 237
Query: 268 RLF----EEAPVKDVFTWTAMVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
+F + D T ++VS ++ G AR++ + V NA++
Sbjct: 238 EVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDM 297
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + +R++ AR +F+ M +NV S +M+ GYA++ + AR +F M + + +SW A+I
Sbjct: 298 YAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALI 357
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF- 437
AGY Q+G +E+++RLF+ +KR F ++L+ CANLA L+LG+Q H Q++K GF
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFW 417
Query: 438 -----EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
E+ FVGN+L+ MY KCG VE+ FE +V++DV+SWN MI GYA++G+G +AL
Sbjct: 418 FQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNAL 477
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+F M G KPD +TM+G+LSACSH GLVE+G YF+SM + G+ P H+TCMVDL
Sbjct: 478 EIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDL 537
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG LDEA +L++ MP +PD WG+LL AC+++G EL + AE + E++P N+G Y
Sbjct: 538 LGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPY 597
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSN+YA GRW DV +VR +MR RGV K G SW+E+Q++VH F V D HP K I+
Sbjct: 598 VLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIH 657
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
L+ L ++K G+V ++ EEE + L H E
Sbjct: 658 LVLKFLTEQMKWAGYVPEAD--DDEICEEESDSELVLHFE 695
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 229/517 (44%), Gaps = 95/517 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + G + A VF+ MP+R++ SYNA++S G+LD A VF MP+ D
Sbjct: 58 NRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQC 117
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSG----------------- 163
SWN M+SG+ ++ A F M D V S+ + LS
Sbjct: 118 SWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALI 177
Query: 164 ------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG----RI 201
Y++ G A+R FD M +N +SWN L+ Y QNG +
Sbjct: 178 SKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKAL 237
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE-----VSWNTMITG 256
E M+ ++ + ++ S++ + + I R+ RD+ V N ++
Sbjct: 238 EVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDM 297
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ + EA+ +F+ P+++V + T+MV GY + V AR++F M EKN VSWNA+I
Sbjct: 298 YAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALI 357
Query: 317 AGYVQTKRMDMARELFEAM-----------------TCKNVAS----------------W 343
AGY Q + A LF + C N+A W
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFW 417
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
N++I Y + G + +F+RM + D +SW A+I GYAQ+GY ++L
Sbjct: 418 FQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNAL 477
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ-LHGQLVKVGFEAGCFVGNALLVM 450
+F +M G++ + VLS C++ +E G++ H ++G ++ +
Sbjct: 478 EIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDL 537
Query: 451 YCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+ G ++EA + + + D + W +++A HG
Sbjct: 538 LGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHG 574
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 220/467 (47%), Gaps = 68/467 (14%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ +++ + E+ N L+ + K DA+ +FDRMP R+ S+N +++ + L EA
Sbjct: 45 IIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEA 104
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV----SWNAMIAGYVQT 322
+F+ P D +W AMVSG+ Q+ + +EA F M ++ V S+ + ++
Sbjct: 105 FNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGL 164
Query: 323 KRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
++M ++ A+ K +V + ++ Y++ G + A+ FD M + +SW ++
Sbjct: 165 TDLNMGIQI-HALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSL 223
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG- 436
I Y Q+G + +L +F+ M G + SV+S CA+ +++ G Q+H ++VK
Sbjct: 224 ITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDK 283
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEE------------------------------ 466
+ +GNAL+ MY KC V EA F+
Sbjct: 284 YRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFS 343
Query: 467 -IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC-------- 517
+++K+V+SWN +IAGY ++G ++A+ LF +K I P T +L+AC
Sbjct: 344 NMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKL 403
Query: 518 ---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+HT +++ G +F S + NS ++D+ + G +++ + + M E D
Sbjct: 404 GRQAHTQILKHGF-WFQSGEESDIFVGNS-----LIDMYMKCGMVEDGCLVFERM-VERD 456
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+W A++ Y + A E+ +M +P++ M +LS
Sbjct: 457 VVSWNAMIVG---YAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLS 500
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 171/345 (49%), Gaps = 37/345 (10%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
R V NA++ Y +++ AR VFD+MP R++VS M+ GY R S+ AAR +F
Sbjct: 285 RNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSN 344
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW-------NGLLA----AYVQ 197
M +++VVSWN +++GY QNG + A R+F +L K E W N L A A ++
Sbjct: 345 MMEKNVVSWNALIAGYTQNGENEEAVRLF--LLLKRESIWPTHYTFGNLLNACANLADLK 402
Query: 198 NGRIEEACML-----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
GR +L F+S ++ NSL+ ++K + D +F+RM RD VSWN
Sbjct: 403 LGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNA 462
Query: 253 MITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAM---- 304
MI GYAQN Y A +F + V D T ++S G V+E R F +M
Sbjct: 463 MIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTEL 522
Query: 305 ---PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK--NVASWNTMITGYAQSGEITHA 359
P K+ + M+ + +D A +L + M + NV W +++ G I
Sbjct: 523 GLAPMKD--HFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVV-WGSLLAACKVHGNIELG 579
Query: 360 RNLFDRMPQHDCIS---WAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+ + +++ + D ++ + + YA+ G +D +R+ +M++ G
Sbjct: 580 KYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRG 624
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 144/307 (46%), Gaps = 32/307 (10%)
Query: 38 KKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNA 97
++ L+ H R+K + D+ N + + + + A VF+ MP R+ VS +
Sbjct: 269 REGLQIHARVVKRDKYRN----DLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETS 324
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV--- 154
M+ GY + AR +F M ++++VSWN +I+GY +N A LF ++ + +
Sbjct: 325 MVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT 384
Query: 155 -VSWNTMLSGYAQNGYADAARRIFDRML----------EKNEISWNGLLAAYVQNGRIEE 203
++ +L+ A R+ ++L E + N L+ Y++ G +E+
Sbjct: 385 HYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVED 444
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQ 259
C++FE +VVSWN+++ G+ + +A IF +M V D V+ +++ +
Sbjct: 445 GCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSH 504
Query: 260 NNYLAEAQRLFEE-------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVS 311
+ E +R F AP+KD F T MV + G +DEA + MP + + V
Sbjct: 505 AGLVEEGRRYFHSMRTELGLAPMKDHF--TCMVDLLGRAGCLDEANDLIQTMPMQPDNVV 562
Query: 312 WNAMIAG 318
W +++A
Sbjct: 563 WGSLLAA 569
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 58/281 (20%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE----- 458
L+ SPF +L +C S +++H +++K F + F+ N L+ Y KCG E
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 459 --------------------------EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
EA++ F+ + + D SWN M++G+A+H ++AL
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY------ 546
F M + ++ + LSAC+ + G + + +I S++
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQI-------HALISKSRYLLDVYMG 189
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-- 604
+ +VD+ + G + AQ M + +W +L+ Y + A KA EV M
Sbjct: 190 SALVDMYSKCGVVACAQRAFDGMAVR-NIVSWNSLITC---YEQNGPAGKALEVFVMMMD 245
Query: 605 ---EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
EP+ + L+++ +A W + + L++ R VK+
Sbjct: 246 NGVEPDE----ITLASVVSACASWSAIRE-GLQIHARVVKR 281
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/540 (42%), Positives = 333/540 (61%), Gaps = 38/540 (7%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF---- 332
D+F W +++ YV++ + +A +FD MPE+NT+S+ +I GY ++ R A ELF
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 333 --------------------EAMTCKN--------------VASWNTMITGYAQSGEITH 358
E + N V N ++ YA+ G + +
Sbjct: 132 REVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMEN 191
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
+ LF P + ++W +I G+ Q G E +LRLF+ M Y + ++S L CA+
Sbjct: 192 SMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACAS 251
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
LA+LE G Q+H VK F+ V NAL+ MY KCGS+++A F+ + +D +SWN M
Sbjct: 252 LAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAM 311
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I+GY+ HG G++AL +F+ M+ +KPD +T VG+LSAC++ GL+++G YF SM +D+G
Sbjct: 312 ISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHG 371
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P +HYTCMV LLGR G LD+A L+ +PF+P W ALLGAC ++ EL +A
Sbjct: 372 IEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISA 431
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + EMEP++ +VLLSN+YA + RW +V+ VR M+ +GVKK G SW+E Q VH+F
Sbjct: 432 QRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSF 491
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
+VGDT HPE I LE L K K+ G++ + +VL DV +EEKE +L HSE+LA+++
Sbjct: 492 TVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSF 551
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
GI+ P+G PIR+MKNLR+C DCH AIK ISK+V R I++RD NRFHHF G CSCGDYW
Sbjct: 552 GIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 149/277 (53%), Gaps = 8/277 (2%)
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
E+ + C ++ +WN ++ Y +S + A LFD MP+ + IS+ +I GYA+S +
Sbjct: 63 EILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122
Query: 390 SLRLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++ LF+ + R E L N+ F SVL CA + L LG Q+H ++K+G + FV NAL+
Sbjct: 123 AIELFVRLHR--EVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALM 180
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
+Y KCG +E + F E ++ ++WNT+I G+ + G G+ AL LF +M ++ ++
Sbjct: 181 DVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV 240
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T L AC+ +E G + +S+ + ++D+ + G + +A+ L+ +
Sbjct: 241 TYSSALRACASLAALEPGLQ-IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDAR-LVFD 298
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ + D +W A++ ++G L +A + +M+
Sbjct: 299 LMNKQDEVSWNAMISGYSMHG---LGREALRIFDKMQ 332
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 151/360 (41%), Gaps = 79/360 (21%)
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C + + ++ +WN L+ +VK L DA +FD MP R+ +S+ T+I GYA++
Sbjct: 62 CEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFL 121
Query: 265 EAQRLF-----EEAPVK---------------------------------DVFTWTAMVS 286
EA LF E P + DVF A++
Sbjct: 122 EAIELFVRLHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 181
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----------- 335
Y + G+++ + +F P +N V+WN +I G+VQ + A LF M
Sbjct: 182 VYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241
Query: 336 ------TC----------------------KNVASWNTMITGYAQSGEITHARNLFDRMP 367
C K++ N +I YA+ G I AR +FD M
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMN 301
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ D +SW A+I+GY+ G ++LR+F +M+ + ++ F VLS CAN L+ G+
Sbjct: 302 KQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQA 361
Query: 428 LHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+++ G E ++ + + G +++A +EI V+ W ++ H
Sbjct: 362 YFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 421
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 203/473 (42%), Gaps = 71/473 (15%)
Query: 28 SPANTNPYPSKKTLKRHL--NSKSRNKP------KPAGDWDIRQWNVAITTHMRNGCCDS 79
SP+ N + L+ + + SR K K G D+ WN+ + ++++
Sbjct: 32 SPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCD 91
Query: 80 ALHVFNSMPRRSSVSYNAMISGYL--------------LNGQLDPARQVFDQMPQ----- 120
A +F+ MP R+++S+ +I GY L+ ++ P + F + Q
Sbjct: 92 ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQFTFASVLQACATM 151
Query: 121 -------------------RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML 161
D+ N ++ Y + + + LF P R+ V+WNT++
Sbjct: 152 EGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVI 211
Query: 162 SGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML----FESKAN 213
G+ Q G + A R+F MLE E++++ L A +E + ++ +
Sbjct: 212 VGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFD 271
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--- 270
++V N+L+ + K + DA+ +FD M +DEVSWN MI+GY+ + EA R+F
Sbjct: 272 KDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKM 331
Query: 271 EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKR 324
+E VK D T+ ++S G +D+ + F +M + + + + M+ +
Sbjct: 332 QETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGH 391
Query: 325 MDMARELFEAMTCK-NVASWNTMITGYAQSGEI----THARNLFDRMPQHDCISWAAIIA 379
+D A +L + + + +V W ++ +I A+ + + PQ D + +
Sbjct: 392 LDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQ-DKATHVLLSN 450
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
YA + ++ + MKR G + + P S + + + S +G H ++
Sbjct: 451 MYATAKRWDNVASVRKNMKRKG--VKKEPGLSWIESQGTVHSFTVGDTSHPEV 501
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 12/228 (5%)
Query: 381 YAQSGYSEDSLRLFIEMKRY--GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+++ G+S S +L E + N + + L C GK LH +++K G
Sbjct: 11 FSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGC 70
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
F N LL MY K + +A F+E+ +++ IS+ T+I GYA +A+ LF +
Sbjct: 71 LDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL 130
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
+ P+ T +L AC+ + G + + + G+ + ++D+ + GR
Sbjct: 131 HR-EVLPNQFTFASVLQACATMEGLNLGNQIHCHVIK-IGLHSDVFVSNALMDVYAKCGR 188
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL--AEKAAEVIFEM 604
++ + L P D TW + + G +L EKA + M
Sbjct: 189 MENSMELFAESPHRND-VTWNTV-----IVGHVQLGDGEKALRLFLNM 230
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/742 (35%), Positives = 403/742 (54%), Gaps = 63/742 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
+A++ Y G+++ A ++F MP+++ V+WNV+++GY + ++ LF M + DV
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACML 207
+ T+L G A + + I ++ E NE GL+ Y + G +A +
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGV 371
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV------------SWNTMIT 255
F++ ++V W++L+ +Q + ++ +F M + D + + NT
Sbjct: 372 FKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNL 431
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
Y Q+ + + FE DV A+V+ Y++NG V + ++++M +++ +SWNA
Sbjct: 432 QYGQSIHACVWKYGFE----TDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAY 487
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCK-------------------- 338
++G D +F M +C
Sbjct: 488 LSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL 547
Query: 339 --NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
N +I YA+ + A F+R+ D +W II YAQ+ E +L F +
Sbjct: 548 DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQ 607
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M++ G + N LS C++LASLE G+QLH + K G + FVG+AL+ MY KCG
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGC 667
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+EEA FE ++ +D I+WNT+I GYA++G G AL F M GI PD +T GILSA
Sbjct: 668 MEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH GLVE+G E+F SM RD+G+ P H CMVD+LGR G+ DE ++ ++ M +A
Sbjct: 728 CSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNAL 787
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W +LGA +++ L EKAA +FE++PE Y+LLSN++A GRW DV +VR M
Sbjct: 788 IWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMS 847
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
+GVKK G SW+E +VHTF D HP+ I+ L+EL+ +L +V T+ VLH
Sbjct: 848 SKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLH 907
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
+VGE EK+ LR+HSE+LA+ + ++S + + IR+ KNLR+C DCH+ +KHIS I + I
Sbjct: 908 NVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEI 967
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
++RD RFHHF G+CSC D+W
Sbjct: 968 VVRDVRRFHHFKNGACSCNDFW 989
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 248/531 (46%), Gaps = 40/531 (7%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
V MP R VS+ A+I G + G + + +F +M ++ ++ ++ SL A
Sbjct: 169 VLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMA 228
Query: 143 RNLFEMMPKR--------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
+L + M + D+ + ++ YA+ G + A ++F M E+N+++WN LL
Sbjct: 229 LDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNG 288
Query: 195 YVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVR----- 245
Y Q G + LF S +V + +++ G K L + + + ++
Sbjct: 289 YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ-VIHSLIIKCGYEG 347
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF---- 301
+E ++ Y++ +A +F+ D+ W+A+++ Q G+ +E+ +F
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR 407
Query: 302 --DAMPEKNTVSWNAMIAGYVQTKRMDMAREL--------FEAMTCKNVASWNTMITGYA 351
D +P + T+ ++++ T + + + FE +VA N ++T Y
Sbjct: 408 LGDTLPNQYTIC--SLLSAATNTGNLQYGQSIHACVWKYGFET----DVAVSNALVTMYM 461
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
++G + L++ M D ISW A ++G G + L +F M G N F S
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L +C+ L + G+Q+H ++K + FV AL+ MY KC +E+A AF + +D
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRD 581
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
+ +W +I YA+ G+ AL F M+ G+KP++ T+ G LS CS +E G + +
Sbjct: 582 LFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQ-LH 640
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
SM G + + + +VD+ + G ++EA+ L + + D W ++
Sbjct: 641 SMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 205/422 (48%), Gaps = 27/422 (6%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEA 273
++S++ ++ LG AK I + V+D ++ W +++ YA+ Y A A+ + +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHG-LIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKM 173
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
P +DV +WTA++ G V G +++ +F M + + +A ++ + MA +L +
Sbjct: 174 PDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233
Query: 334 AMTCK--------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
M + ++ + ++ YA+ GEI A +F MP+ + ++W ++ GYAQ G
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
L+LF M + N T+VL CAN +L+ G+ +H ++K G+E F+G
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
L+ MY KCG +A F+ I D++ W+ +I + G ++++ LF M+ P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ T+ +LSA ++TG ++ G + ++ YG + +V + + G + + L
Sbjct: 414 NQYTICSLLSAATNTGNLQYG-QSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472
Query: 566 MKNMPFEPDAATWGALLGA---CRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYA 620
++M + D +W A L C +Y ++ + + M E MY +S L +
Sbjct: 473 YESM-VDRDLISWNAYLSGLHDCGMY------DRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 621 AS 622
S
Sbjct: 526 CS 527
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/550 (19%), Positives = 215/550 (39%), Gaps = 138/550 (25%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + + G + A +F MP ++ V++N +++GY G + ++F M
Sbjct: 247 DLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMM 306
Query: 120 QRDL----VSWNVMISGYVRNKSLSA---------------------------------- 141
+ D+ + ++ G +K+L
Sbjct: 307 ELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAI 366
Query: 142 -ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-------------------- 180
A +F+ + K D+V W+ +++ Q G ++ + ++F M
Sbjct: 367 DAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAAT 426
Query: 181 -------------------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
E + N L+ Y++NG + + L+ES + +++SWN+
Sbjct: 427 NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNA 486
Query: 222 LMG---------------------GFVKQ-----KRLGDAKWIFD--------RMPVRDE 247
+ GF+ LG +FD ++++
Sbjct: 487 YLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ 546
Query: 248 VSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ N +I YA+ YL +A F V+D+FTWT +++ Y Q + ++A F
Sbjct: 547 LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFR 606
Query: 303 AMPEK----NTVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSG 354
M ++ N + ++G ++ ++L F++ ++ + ++ YA+ G
Sbjct: 607 QMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ A LF+ + + D I+W II GYAQ+G +L F M G + FT +LS
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC-----GSVEEAYHAFEEIVD 469
C++ +E GK+ + + G + V +C C G V + + E+ +
Sbjct: 727 ACSHQGLVEEGKEHFNSMYRD-------FGISPTVDHCACMVDILGRVGK-FDELEDFIQ 778
Query: 470 KDVISWNTMI 479
K +S N +I
Sbjct: 779 KMQLSQNALI 788
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 155/395 (39%), Gaps = 62/395 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N +T +M+NGC ++ SM R +S+NA +SG G D +F M
Sbjct: 449 DVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHML 508
Query: 120 QRDLVS---------------------------------------WNVMISGYVRNKSLS 140
+ + +I Y + L
Sbjct: 509 EEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLE 568
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A F + RD+ +W +++ YAQ + A F +M ++ NE + G L+
Sbjct: 569 DADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCS 628
Query: 197 QNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+E M+F+S ++ ++L+ + K + +A+ +F+ + RD ++WNT
Sbjct: 629 SLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNT 688
Query: 253 MITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+I GYAQN L + + +E D T+T ++S G V+E + F++M
Sbjct: 689 IICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDF 748
Query: 309 TVS-----WNAMIAGYVQTKRMDMARELFEAMT-CKNVASWNTMITGYAQSGEIT----H 358
+S M+ + + D + + M +N W T++ +
Sbjct: 749 GISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKA 808
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
A LF+ P+ + S+ + +A G +D R+
Sbjct: 809 ANKLFELQPEEES-SYILLSNIFATEGRWDDVKRV 842
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL--------LNGQLDPA 111
D+ W V IT + + + AL+ F M + ++G L L G
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLH 640
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
VF D+ + ++ Y + + A LFE + +RD ++WNT++ GYAQNG +
Sbjct: 641 SMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGN 700
Query: 172 AARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN------- 220
A F ML++ + +++ G+L+A G +EE F S +S
Sbjct: 701 KALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760
Query: 221 -SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA----EAQRLFEEAPV 275
++G K L D +I ++ + W T++ +N L A +LFE P
Sbjct: 761 VDILGRVGKFDELED--FIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPE 818
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
++ ++ + + + G+ D+ + + M K
Sbjct: 819 EES-SYILLSNIFATEGRWDDVKRVRSLMSSK 849
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/563 (41%), Positives = 342/563 (60%), Gaps = 16/563 (2%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQN-NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
L DA +F + D S NT+I+ +++ +L A+ LF+ P +D F W+A+VSGY +
Sbjct: 79 LPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTR 138
Query: 291 NGKVDEARMIFDAMPEK-------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS- 342
+G+ + A ++ M E+ N + ++ +A + REL + + + +
Sbjct: 139 HGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAA 198
Query: 343 ------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
W+ + YA+ G + AR +FDRMP D +SW A++ Y G + RLF+
Sbjct: 199 GGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLH 258
Query: 397 MKRY-GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M R G R N + VL CA A G+Q+HG++ K G CF +ALL MY KCG
Sbjct: 259 MLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCG 318
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ A FE + D++SW +I+GYA++G ++AL F+ GIKPD +T VG+LS
Sbjct: 319 DMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLS 378
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GLV+KG E F+S+ Y + + HY C++DLL R+G+ + A+ ++ NM +P+
Sbjct: 379 ACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNK 438
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W +LLG CR++ LA +AAE +FE+EPEN YV L+N+YA+ G + +V VR M
Sbjct: 439 FLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIM 498
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+G+ K+ SW+EV +VH F VGD HP+ D IYA L++L K+ ++G+V + VL
Sbjct: 499 ESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVL 558
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HDV +E+KE + YHSE+LAVA+GI++ P G PI+V KNLR+C DCH AIK IS+IV R
Sbjct: 559 HDVEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRD 618
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
II+RD+NRFHHF G CSC DYW
Sbjct: 619 IIVRDSNRFHHFKDGICSCRDYW 641
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 153/346 (44%), Gaps = 55/346 (15%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-------DLVSWNVMIS 131
SA +F+ MP+R +++A++SGY +GQ + A ++ +M + + + + ++
Sbjct: 113 SARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALA 172
Query: 132 GYVRNKSLSAARNLFEMMPKR-------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
+ A R L + +R D V W+ + YA+ G D ARR+FDRM ++
Sbjct: 173 AAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRD 232
Query: 185 EISWNGLLAAYVQNGRIEEACMLF--------------------ESKANWEVVSWNSLMG 224
+SW ++ Y GR E LF + A + V S+ +
Sbjct: 233 AVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVH 292
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G + + GD+ + + + ++ Y++ + A R+FE D+ +WTA+
Sbjct: 293 GRMAKSGTGDSCF-----------AESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAV 341
Query: 285 VSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT---C 337
+SGY QNG+ +EA FD + + V++ +++ +D E+F ++ C
Sbjct: 342 ISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYC 401
Query: 338 --KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ +I ++SG+ A + M + + WA+++ G
Sbjct: 402 IEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGG 447
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 22/285 (7%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMP 150
+V ++A+ Y G++D AR+VFD+MP RD VSW M+ Y LF M+
Sbjct: 202 AVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLR 261
Query: 151 KRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIE 202
R V ++ +L AQ R++ RM + + + LL Y + G +
Sbjct: 262 TRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMG 321
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVR-DEVSWNTMITGYA 258
A +FE+ A ++VSW +++ G+ + + +A FD R ++ D V++ +++ A
Sbjct: 322 SAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACA 381
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTA-----MVSGYVQNGKVDEA-RMIFDAMPEKNTVSW 312
+ + +F + TA ++ ++G+ + A +MI + + N W
Sbjct: 382 HAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLW 441
Query: 313 NAMIAGYVQTKRMDMARELFEAM---TCKNVASWNTMITGYAQSG 354
+++ G K + +AR EA+ +N A++ T+ YA G
Sbjct: 442 ASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVG 486
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 126/313 (40%), Gaps = 55/313 (17%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ-------- 107
A D W+ + + G D A VF+ MP R +VS+ AM+ Y G+
Sbjct: 197 AAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLF 256
Query: 108 --------LDP--------------------ARQVFDQMPQR----DLVSWNVMISGYVR 135
+ P RQV +M + + + ++ Y +
Sbjct: 257 LHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSK 316
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGL 191
+ +A +FE M K D+VSW ++SGYAQNG + A R FD L + + +++ G+
Sbjct: 317 CGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGV 376
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
L+A G +++ +F S + + ++ + + A+ + M V+
Sbjct: 377 LSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKP 436
Query: 246 DEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
++ W +++ G + + A+R LFE P ++ T+ + + Y G DE +
Sbjct: 437 NKFLWASLLGGCRIHKNVGLARRAAEALFEIEP-ENPATYVTLANIYASVGLFDEVEDVR 495
Query: 302 DAMPEKNTVSWNA 314
M K A
Sbjct: 496 RIMESKGITKMPA 508
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/729 (34%), Positives = 415/729 (56%), Gaps = 25/729 (3%)
Query: 75 GCCDS---ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWN 127
G CDS A VF+ M R ++S+N++I+ + NG + + + F QM + D ++ +
Sbjct: 206 GNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITIS 265
Query: 128 VMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
++ ++L R L M+ K +V N++LS Y+Q G ++ A +F +M E+
Sbjct: 266 ALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRER 325
Query: 184 NEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
+ ISWN ++A++V NG A L +++ V++ + + + L
Sbjct: 326 DLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFV 385
Query: 240 DRMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
+ + + + N ++T Y + +A AQR+ + P +D TW A++ G+ N + + A
Sbjct: 386 ILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAI 445
Query: 299 MIFDAMPEK----NTVSWNAMIAGYVQTKR-----MDMARELFEAMTCKNVASWNTMITG 349
F+ + E+ N ++ +++ ++ M + + A +++IT
Sbjct: 446 EAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITM 505
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YAQ G++ + +FD + + +W AI++ A G E++L+L I+M+ G L++ F
Sbjct: 506 YAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSF 565
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+ + NL L+ G+QLH ++K GFE+ +V NA + MY KCG +++ + +
Sbjct: 566 SVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRS 625
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+ SWN +I+ ARHGF + A F M +G++PD +T V +LSACSH GLV++G Y
Sbjct: 626 RSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAY 685
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F SM+ +GV +H C++DLLGRAG+L EA+N + MP P W +LL AC+++G
Sbjct: 686 FSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHG 745
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
ELA KAA+ +FE++ + YVL SN+ A++ RW DV VR +M +KK SW+
Sbjct: 746 NLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWV 805
Query: 650 EVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY 709
+++N+V TF +GD HP+ IYA LEEL+ +++ G++ T L D EE+KEH L
Sbjct: 806 KLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWN 865
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSE++A+A+G+++ G P+R+ KNLRVC DCH+ K +S+I+GR IILRD RFHHFS
Sbjct: 866 HSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSS 925
Query: 770 GSCSCGDYW 778
G CSC DYW
Sbjct: 926 GKCSCSDYW 934
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/668 (21%), Positives = 270/668 (40%), Gaps = 128/668 (19%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL-----VSWNVM 129
G + A HVF+ MP R+ S+N ++SG++ G A Q F M + + V+ +++
Sbjct: 6 GSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLV 65
Query: 130 I----SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
SG + + ++ + DV ++L Y G+ +F + E N
Sbjct: 66 TACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNI 125
Query: 186 ISWNGLLAAYVQNGRIEEACMLF------------------------------------- 208
+SW L+ Y NG ++E ++
Sbjct: 126 VSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGS 185
Query: 209 --ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+S + V NSL+ F + +A +FD M RD +SWN++IT N + ++
Sbjct: 186 VIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKS 245
Query: 267 QRLFEEA----------------PV-----------------------KDVFTWTAMVSG 287
F + PV +V +++S
Sbjct: 246 LEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSM 305
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------ 335
Y Q GK ++A +F M E++ +SWN+M+A +V A EL M
Sbjct: 306 YSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTF 365
Query: 336 -----TCKNVASW-------------------NTMITGYAQSGEITHARNLFDRMPQHDC 371
C N+ + N ++T Y + G + A+ + MP D
Sbjct: 366 TTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDE 425
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS-LELGKQLHG 430
++W A+I G+A + ++ F ++ G +N ++LS + L+ G +H
Sbjct: 426 VTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHA 485
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+V GFE FV ++L+ MY +CG + + + F+ + +K+ +WN +++ A +G G++
Sbjct: 486 HIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEE 545
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
AL L M+ GI D + + + L+++G + +S+ +G N +
Sbjct: 546 ALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQ-LHSLIIKHGFESNDYVLNATM 604
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE--MEPEN 608
D+ G+ G +D+ ++ P +W L+ A +G + A +A + + + P++
Sbjct: 605 DMYGKCGEIDDVFRILPQ-PRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDH 663
Query: 609 AGMYVLLS 616
LLS
Sbjct: 664 VTFVSLLS 671
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 221/476 (46%), Gaps = 26/476 (5%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSW 219
Y++ G + A+ +FD+M E+NE SWN L++ +V+ G ++A C + E
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
SL+ + + + + ++ D +++ Y ++AE +F+E
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIA-----GYVQTKRM--D 326
++ +WT+++ GY NG V E ++ + + NAM G + K +
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ + ++ V+ N++I+ + I A +FD M + D ISW +II +G+
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E SL F +M+ + + +++L C + +L G+ LHG +VK G E+ V N+
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNS 301
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
LL MY + G E+A F ++ ++D+ISWN+M+A + +G AL L M +
Sbjct: 302 LLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATN 361
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T LSAC + ++ + + + +I + +V + G+ G + AQ +
Sbjct: 362 YVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNA----LVTMYGKFGSMAAAQRVC 417
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAA 621
K MP + D TW AL+G + + A E + E + Y+ + NL +A
Sbjct: 418 KIMP-DRDEVTWNALIGG---HADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/570 (22%), Positives = 250/570 (43%), Gaps = 100/570 (17%)
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
Y + S+ A+++F+ MP+R+ SWN ++SG+ + G+ A + F MLE + + +
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHG-VRPSSYV 60
Query: 193 AAYVQNGRIEEACML---FESKAN-------WEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
AA + CM F+ A+ +V SL+ + + + +F +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF----------------------- 279
+ VSW +++ GYA N + E ++ V+
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 280 ----------------TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
+++S + ++EA +FD M E++T+SWN++I V
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 324 RMDMARELFEAM-----------------TC----------------------KNVASWN 344
+ + E F M C NV N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++++ Y+Q+G+ A +F +M + D ISW +++A + +G +L L IEM + +
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N FT+ LS C NL +L++ +H ++ +G +GNAL+ MY K GS+ A
Sbjct: 361 NYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA-CSHTGLV 523
+ + D+D ++WN +I G+A + A+ F ++ G+ + IT+V +LSA S L+
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLL 477
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+ G ++ G + + ++ + + G L+ + N + ++ +++TW A+L
Sbjct: 478 DHGMP-IHAHIVVAGFELETFVQSSLITMYAQCGDLNTS-NYIFDVLANKNSSTWNAILS 535
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
A YG E+A ++I +M N G+++
Sbjct: 536 ANAHYGP---GEEALKLIIKM--RNDGIHL 560
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 143/286 (50%), Gaps = 16/286 (5%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y++ G I HA+++FD+MP+ + SW +++G+ + G+ + +++ F M +G R +
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 410 TSVLSTCANLASLELGK-QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
S+++ C + G Q+H ++K G FVG +LL Y G V E F+EI
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK--G 526
+ +++SW +++ GYA +G K+ + ++ ++ G+ ++ M ++ +C LV+K G
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCG--VLVDKMLG 179
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ S+ + G+ ++ + G ++EA + +M E D +W +++ A
Sbjct: 180 YQVLGSVIKS-GLDTTVSVANSLISMFGNCDSIEEASCVFDDMK-ERDTISWNSIITASV 237
Query: 587 LYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAASG-----RWG 626
G EK+ E +M +A Y+ +S L G RWG
Sbjct: 238 HNGH---CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWG 280
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 188/451 (41%), Gaps = 34/451 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ---- 120
N ++ + + G + A VF+ M R +S+N+M++ ++ NG A ++ +M Q
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ V++ +S ++L ++ +++ N +++ Y + G AA+R+
Sbjct: 360 TNYVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKI 419
Query: 180 MLEKNEISWNGLLAAYVQ----NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
M +++E++WN L+ + N IE +L E ++ +L+ F+ L D
Sbjct: 420 MPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDH 479
Query: 236 KWIFDRMPVRDEV----------SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
MP+ + +++IT YAQ L + +F+ K+ TW A++
Sbjct: 480 G-----MPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAIL 534
Query: 286 SGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
S G +EA + M + S++ A +D ++L +
Sbjct: 535 SANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFE 594
Query: 342 S----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
S N + Y + GEI + + SW +I+ A+ G+ + + F EM
Sbjct: 595 SNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEM 654
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGS 456
G R + F S+LS C++ ++ G + K G G ++ + + G
Sbjct: 655 LDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGK 714
Query: 457 VEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+ EA + ++ V + W +++A HG
Sbjct: 715 LTEAENFINKMPVPPTDLVWRSLLAACKIHG 745
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY K GS+E A H F+++ +++ SWN +++G+ R G+ + A+ F M G++P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+++AC +G + +G ++ G+ + T ++ G G + E + K +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 570 PFEPDAATWGALL 582
EP+ +W +L+
Sbjct: 121 E-EPNIVSWTSLM 132
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/740 (34%), Positives = 395/740 (53%), Gaps = 61/740 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE------MM 149
NA+I Y LD AR VF++M RD VSWN +ISGY N A +++ M+
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 150 PK---------------------------------RDVVSWNTMLSGYAQNGYADAARRI 176
P DV+ N +LS Y + ARR+
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA- 235
F +M K+ ++WN ++ Y Q GR E + LF + V S+ + GD
Sbjct: 280 FSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQ 339
Query: 236 ------KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
K++ D V+ N +I YA+ L AQ +F+ KD TW ++++GY
Sbjct: 340 VGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399
Query: 290 QNGKVDEARMIFDAMP---EKNTVSWNAMIAGYVQTKRMDMAREL--------FEAMTCK 338
Q+G E F M + ++V++ +++ + Q ++ R + FEA
Sbjct: 400 QSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEA---- 455
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ N+++ YA+ GE+ +F M HD ISW +IA ++ EM+
Sbjct: 456 ELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMR 515
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G + + +L C+ LA GK++HG + K GFE+ +GNAL+ MY KCGS+E
Sbjct: 516 TEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLE 575
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
F+ + +KDV++W +I+ + +G GK AL F+ M+ G+ PD + + + ACS
Sbjct: 576 NCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACS 635
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H+G+V++G +F M DY + P +HY C+VDLL R+G L +A+ + +MP +PDA+ W
Sbjct: 636 HSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLW 695
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
GALL ACR G T +A++ ++ I E+ ++ G YVL+SN+YA G+W V VR M+ +
Sbjct: 696 GALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTK 755
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
G+KK G SW+E+Q +V+ F GD + D++ LE L + ++G+V + LHDV
Sbjct: 756 GLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDV 815
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
E++K ML HSE+LA+A+G+L+ G P+ VMKNLRVC DCH K+I+KI+ R I++
Sbjct: 816 EEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILV 875
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD NRFH F G+CSCGD+W
Sbjct: 876 RDANRFHRFKDGACSCGDHW 895
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 134/252 (53%), Gaps = 3/252 (1%)
Query: 346 MITGYAQSGEITHARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+I+ YAQ + + ++F + P ++ W +II +G +L + EM+ +
Sbjct: 60 LISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQP 119
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ F SV+++CA + LELG +H +++GFE+ ++GNAL+ MY + ++ A + F
Sbjct: 120 DAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVF 179
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
EE+ ++D +SWN++I+GY +GF +DAL ++ + G+ PD TM +L AC V+
Sbjct: 180 EEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVK 239
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + + G+ + ++ + + RL EA+ + M + D+ TW ++
Sbjct: 240 EGVA-VHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK-DSVTWNTMICG 297
Query: 585 CRLYGKTELAEK 596
G+ E + K
Sbjct: 298 YAQLGRHEASVK 309
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/735 (34%), Positives = 405/735 (55%), Gaps = 64/735 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK-RDV 154
N++IS G +D A +FDQM +RD +SWN + + Y +N + + +F +M + D
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 155 VSWNTMLSGYAQNGYAD-----------AARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
V+ T+ + + G+ D + FD ++ N LL Y GR E
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV----CVCNTLLRMYAGAGRSVE 297
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE----VSWNTMITGYAQ 259
A ++F+ +++SWNSLM FV R DA + M + V++ + +
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 260 NNYLAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
++ + + L V +F A+VS Y + G++ E+R + MP ++ V+WNA+
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 417
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVAS--------------------------------- 342
I GY + + D A F+ M + V+S
Sbjct: 418 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477
Query: 343 -------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N++IT YA+ G+++ +++LF+ + + I+W A++A A G+ E+ L+L
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 537
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+M+ +G L++ F+ LS A LA LE G+QLHG VK+GFE F+ NA MY KCG
Sbjct: 538 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 597
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ E V++ + SWN +I+ RHG+ ++ F M +GIKP +T V +L+
Sbjct: 598 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 657
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH GLV+KG Y+ + RD+G+ P +H C++DLLGR+GRL EA+ + MP +P+
Sbjct: 658 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPND 717
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W +LL +C+++G + KAAE + ++EPE+ +YVL SN++A +GRW DV VR +M
Sbjct: 718 LVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQM 777
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+ +KK SW+++++KV +F +GD HP+ IYA LE+++ +K+ G+V T L
Sbjct: 778 GFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQAL 837
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
D EE+KEH L HSE+LA+AY ++S P G +R+ KNLR+C DCH+ K +S+++GR
Sbjct: 838 QDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRR 897
Query: 756 IILRDNNRFHHFSGG 770
I+LRD RFHHF G
Sbjct: 898 IVLRDQYRFHHFERG 912
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 234/490 (47%), Gaps = 38/490 (7%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN-GRIEEACML 207
MP R+ VSWNTM+SG + G F +M + + ++A+ V GR M
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR--SGSMF 58
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
E + GFV + L + D ++ Y ++ ++
Sbjct: 59 REGVQ----------VHGFVAKSGL-----------LSDVYVSTAILHLYGVYGLVSCSR 97
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTK 323
++FEE P ++V +WT+++ GY G+ +E I+ M + N S + +I+ K
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 324 RMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ R++ + + S N++I+ G + +A +FD+M + D ISW +I A
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
YAQ+G+ E+S R+F M+R+ + +N + +++LS ++ + G+ +HG +VK+GF++
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 277
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
V N LL MY G EA F+++ KD+ISWN+++A + G DAL L SM
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
+ G + +T L+AC EKG + + G+ N +V + G+ G +
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 396
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN-AGMYVLLSNL 618
E++ ++ MP D W AL+G Y + E +KA M E + Y+ + ++
Sbjct: 397 SESRRVLLQMP-RRDVVAWNALIGG---YAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 619 YAASGRWGDV 628
+A GD+
Sbjct: 453 LSACLLPGDL 462
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 116/292 (39%), Gaps = 52/292 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ + + G + V MPRR V++NA+I GY + D A F M +
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 125 S----------------------------------------WNVMISGYVRNKSLSAARN 144
S N +I+ Y + LS++++
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGR 200
LF + R++++WN ML+ A +G+ + ++ +M + ++ S++ L+A +
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 201 IEEACML--FESKANWEVVS--WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+EE L K +E S +N+ + K +G+ + R SWN +I+
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 257 YAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
++ Y E F E + T+ ++++ G VD+ +D +
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 675
>gi|15220741|ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
gi|75097094|sp|O04590.1|PPR88_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62260, mitochondrial; Flags: Precursor
gi|2160154|gb|AAB60776.1| F19K23.18 gene product [Arabidopsis thaliana]
gi|332195821|gb|AEE33942.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
Length = 656
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/615 (38%), Positives = 368/615 (59%), Gaps = 26/615 (4%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
R N + +R+G A +F + R++V++N MISGY+ +++ AR++FD MP+
Sbjct: 40 FRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 121 RDLVSWNVMISGYVRN---KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
RD+V+WN MISGYV + L AR LF+ MP RD SWNTM+SGYA+N A +F
Sbjct: 100 RDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
++M E+N +SW+ ++ + QNG ++ A +LF + +L+ G +K +RL +A W
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
Query: 238 IFDR----MPVRDEV--SWNTMITGYAQNNYLAEAQRLFEEAP---------------VK 276
+ + + R+++ ++NT+I GY Q + A+ LF++ P K
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+V +W +M+ Y++ G V AR++FD M +++T+SWN MI GYV RM+ A LF M
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMP 339
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
++ SWN M++GYA G + AR+ F++ P+ +SW +IIA Y ++ ++++ LFI
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M GE+ + TS+LS L +L LG Q+H +VK V NAL+ MY +CG
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGE 458
Query: 457 VEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ E+ F+E+ + ++VI+WN MI GYA HG +AL LF SMK+ GI P IT V +L+
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLN 518
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GLV++ F SM Y + P +HY+ +V++ G+ +EA ++ +MPFEPD
Sbjct: 519 ACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDK 578
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
WGALL ACR+Y LA AAE + +EPE++ YVLL N+YA G W + S+VR+ M
Sbjct: 579 TVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNM 638
Query: 636 RDRGVKKVTGYSWLE 650
+ +KK G SW++
Sbjct: 639 ESKRIKKERGSSWVD 653
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 260/547 (47%), Gaps = 80/547 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN I+ + +N AL +F MP R++VS++AMI+G+ NG++D A +F +MP
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLF----EMMPKRD--VVSWNTMLSGYAQNGYADAA 173
+D +++G ++N+ LS A + ++ R+ V ++NT++ GY Q G +AA
Sbjct: 195 VKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAA 254
Query: 174 RRIFDRMLE---------------KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
R +FD++ + KN +SWN ++ AY++ G + A +LF+ + + +S
Sbjct: 255 RCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS 314
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
WN+++ G+V R+ DA +F MP RD SWN M++GYA + A+ FE+ P K
Sbjct: 315 WNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHT 374
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTV-SWNAMIAGYVQTKRMDMAREL 331
+W ++++ Y +N EA +F M P+ +T+ S + G V + ++
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQI 434
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDS 390
+V N +IT Y++ GEI +R +FD M + + I+W A+I GYA G + ++
Sbjct: 435 VVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L LF MK G + F SVL+ CA+
Sbjct: 495 LNLFGSMKSNGIYPSHITFVSVLNACAH-------------------------------- 522
Query: 451 YCKCGSVEEAYHAFEEI-----VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
G V+EA F + ++ + +++++ + G ++A+ + SM +P
Sbjct: 523 ---AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEP 576
Query: 506 DDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
D +L AC ++ GL E + + +S Y + ++ G DEA
Sbjct: 577 DKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPE-----SSTPYVLLYNMYADMGLWDEA 631
Query: 563 QNLMKNM 569
+ NM
Sbjct: 632 SQVRMNM 638
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 26/301 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D WN I ++ + A +F+ MP R + S+N M+SGY G ++ AR F++
Sbjct: 309 DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEK 368
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYAD-- 171
P++ VSWN +I+ Y +NK A +LF M K D + ++LS A G +
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLR 426
Query: 172 ---AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFV 227
+I + + + N L+ Y + G I E+ +F E K EV++WN+++GG+
Sbjct: 427 LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYA 486
Query: 228 KQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT--- 280
+A +F M +++ +++ A + EA+ F + V+
Sbjct: 487 FHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQF--VSMMSVYKIEP 544
Query: 281 ----WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
++++V+ G+ +EA I +MP E + W A++ + +A EAM
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Query: 336 T 336
+
Sbjct: 605 S 605
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/670 (37%), Positives = 393/670 (58%), Gaps = 50/670 (7%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN-E 185
N +++ Y++N + +AR +F+ M +RDV+SWN++++GY NG A+ +F +ML E
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293
Query: 186 ISWNGLLAAY--------VQNGRIEEACMLFESKANW--EVVSWNSLMGGFVKQKRLGDA 235
I +++ + + GR A F KA + E N+L+ + K L A
Sbjct: 294 IDLATIVSVFAGCADSRLISLGR---AVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQN 291
K +F M R VS+ +MI GYA+ EA +LFEE + DV+T TA+++ +N
Sbjct: 351 KVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARN 410
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
+DE + + + + E DM ++F + N ++ YA
Sbjct: 411 RLLDEGKRVHEWIKEN------------------DMGFDIFVS---------NALMDMYA 443
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF---IEMKRYGERLNRSP 408
+ G + A +F M D ISW +I GY+++ Y+ ++L LF + KR+ +
Sbjct: 444 KCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSP--DERT 501
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
VL CA+L++ + G+++HG +++ G+ + V N+L+ MY KCG++ A F++I
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDIT 561
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
KD++SW MIAGY HGFGK+A+ LF M+ GI+PD+I+ V +L ACSH+GLV++G
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWR 621
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+F M + + P +HY C+VD+L R G L +A ++NMP PDA WGALL CR++
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIH 681
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
+LAE+ AE +FE+EPEN G YVL++N+YA + +W +V ++R ++ RG++K G SW
Sbjct: 682 HDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSW 741
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
+E++ +V+ F GD+ +PE ++I A+L + ++ ++G+ TK L D E EKE L
Sbjct: 742 IEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALC 801
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
HSEKLA+A GI+S G+ IRV KNLRVC DCH K +SK+ R I+LRD+NRFH F
Sbjct: 802 GHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFK 861
Query: 769 GGSCSCGDYW 778
G CSC +W
Sbjct: 862 DGHCSCRGFW 871
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 179/394 (45%), Gaps = 60/394 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQ 120
N + +++N DSA VF+ M R +S+N++I+GY+ NG + VF QM +
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293
Query: 121 RDLVS-----------------------------------WNVMISGYVRNKSLSAARNL 145
DL + N ++ Y + L +A+ +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVV 353
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRI 201
F M R VVS+ +M++GYA+ G A A ++F+ M E+ + + +L +N +
Sbjct: 354 FREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLL 413
Query: 202 EEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+E + E+ +++ N+LM + K + +A+ +F M V+D +SWNT+I GY
Sbjct: 414 DEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGY 473
Query: 258 AQNNYLAEAQRLFEEAPVKDVF-----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS- 311
++N Y EA LF V+ F T ++ D+ R I + S
Sbjct: 474 SKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 312 ---WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
N+++ Y + + +AR LF+ +T K++ SW MI GY G A LF++M Q
Sbjct: 534 RHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 593
Query: 369 H----DCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
D IS+ +++ + SG ++ R F M+
Sbjct: 594 AGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 5/258 (1%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y G++ A +FD++ + W ++ A+SG S+ LF +M G ++ F
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+ V + ++L S+ G+QLHG ++K GF VGN+L+ Y K V+ A F+E+ +
Sbjct: 199 SCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE 258
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+DVISWN++I GY +G + L +F M GI+ D T+V + + C+ + L+ G
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLG-RA 317
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+ + ++D+ + G LD A+ + + M + + G Y
Sbjct: 318 VHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAG----YA 373
Query: 590 KTELAEKAAEVIFEMEPE 607
+ LA +A ++ EME E
Sbjct: 374 REGLAGEAVKLFEEMEEE 391
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 133/331 (40%), Gaps = 67/331 (20%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAG----DW--------DIRQWNVAITTHMRNGCCDSALHV 83
P T+ LN +RN+ G +W DI N + + + G A V
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 454
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-------PQRDLVSW---------- 126
F+ M + +S+N +I GY N + A +F+ + P V+
Sbjct: 455 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSA 514
Query: 127 -----------------------NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
N ++ Y + +L AR LF+ + +D+VSW M++G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAG 574
Query: 164 YAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANW 214
Y +G+ A +F++M +E +EIS+ LL A +G ++E F E K
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITG--YAQNNYLAE--AQRL 269
V + ++ + L A + MP+ D W ++ G + LAE A+++
Sbjct: 635 TVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKV 694
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
FE P ++ + M + Y + K +E + +
Sbjct: 695 FELEP-ENTGYYVLMANIYAEAEKWEEVKRL 724
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 15/228 (6%)
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
+ +SG +++++L ++ ++ SVL CA+ SL+ GK++ + GF
Sbjct: 71 FCESGNLKNAVKLLHVSGKWD--IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLD 128
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+G+ L +MY CG ++EA F+++ + + WN ++ A+ G ++ LF+ M +
Sbjct: 129 SNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYG---VIPNSKHYTCMVDLLGRA 556
G++ D T + + S V G + + Y + +G + NS +V +
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNS-----LVAFYLKN 243
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
R+D A+ + M E D +W +++ Y LAEK V +M
Sbjct: 244 HRVDSARKVFDEMT-ERDVISWNSIING---YVSNGLAEKGLSVFVQM 287
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/683 (36%), Positives = 370/683 (54%), Gaps = 109/683 (15%)
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C + + ++ +WN L+ +VK L DA +FD MP R+ +S+ T+I GYA++
Sbjct: 62 CEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFL 121
Query: 265 EAQRLF--------EEAPV-------------------------------KDVFTWTAMV 285
EA LF E P + F TA++
Sbjct: 122 EAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALI 181
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------- 335
Y G+VD AR +FD + K+ VSW M+ + + A +LF M
Sbjct: 182 DAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNF 241
Query: 336 -------TCKNVASWNT----------------------MITGYAQSGEITHARNLFDRM 366
C + +++ ++ Y +SG+I AR F+ +
Sbjct: 242 TFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEI 301
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
P+ D I W+ +IA YAQS S++++ +F +M++ N+ F SVL CA + L LG
Sbjct: 302 PKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGN 361
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H ++K+G + FV NAL+ +Y KCG +E + F E ++ ++WNT+I G+ + G
Sbjct: 362 QIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLG 421
Query: 487 FGKDALMLFESM-------------------------------KTVGIKPDDITMVGILS 515
G+ AL LF +M ++ +KPD +T VG+LS
Sbjct: 422 DGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLS 481
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC++ GL+++G YF SM +D+G+ P +HYTCMV LLGR G LD+A L+ +PF+P
Sbjct: 482 ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSV 541
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W ALLGAC ++ EL +A+ + EMEP++ +VLLSN+YA + RW +V+ VR M
Sbjct: 542 MVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNM 601
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+ +GVKK G SW+E Q VH+F+VGDT HPE I LE L K K+ G++ + +VL
Sbjct: 602 KRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVL 661
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
DV +EEKE +L HSE+LA+++GI+ P+G PIR+MKNLR+C DCH AIK ISK+V R
Sbjct: 662 LDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQRE 721
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I++RD NRFHHF G CSCGDYW
Sbjct: 722 IVVRDINRFHHFQEGLCSCGDYW 744
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 135/589 (22%), Positives = 247/589 (41%), Gaps = 50/589 (8%)
Query: 20 TQSINRLQSPANTNPYPSKKTLKRHL--NSKSRNKP------KPAGDWDIRQWNVAITTH 71
TQ SP+ N + L+ + + SR K K G D+ WN+ + +
Sbjct: 24 TQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMY 83
Query: 72 MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--------PQRDL 123
+++ A +F+ MP R+++S+ +I GY + + A ++F ++ P
Sbjct: 84 VKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFT 143
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
+++S +F++ + + ++ Y+ G D AR +FD +L K
Sbjct: 144 TILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYK 203
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR-- 241
+ +SW G++ + +N +EA LF S+ N+ V + LG + +
Sbjct: 204 DMVSWTGMVTCFAENDCFKEALKLF-SQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSV 262
Query: 242 ----MPVRDEVSWNT---MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
+ R E+ ++ Y ++ + +A+R FEE P KDV W+ M++ Y Q+ +
Sbjct: 263 HGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQS 322
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC--------KNVASWNTM 346
EA +F M + + A +Q L + C +V N +
Sbjct: 323 KEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 382
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+ YA+ G + ++ LF P + ++W +I G+ Q G E +LRLF+ M Y +
Sbjct: 383 MDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATE 442
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
++S L CA+LA+LE G Q+H VK + FVG +L G +++ F
Sbjct: 443 VTYSSALRACASLAALEPGLQIHSLTVKP--DKLTFVG--VLSACANAGLLDQGQAYFTS 498
Query: 467 IVDKDVIS-----WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
++ I + M+ R G A+ L + + +P + +L AC
Sbjct: 499 MIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDE---IPFQPSVMVWRALLGACVIHN 555
Query: 522 LVEKGTEYFYSMNRDYGVIPNSK-HYTCMVDLLGRAGRLDEAQNLMKNM 569
+E G S R + P K + + ++ A R D ++ KNM
Sbjct: 556 DIELGR---ISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNM 601
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 4/204 (1%)
Query: 381 YAQSGYSEDSLRLFIEMKRY--GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+++ G+S S +L E + N + + L C GK LH +++K G
Sbjct: 11 FSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGC 70
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
F N LL MY K + +A F+E+ +++ IS+ T+I GYA +A+ LF +
Sbjct: 71 LDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL 130
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G + + IL T E G + + G N+ T ++D GR
Sbjct: 131 HREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFK-LGHESNAFVGTALIDAYSVCGR 189
Query: 559 LDEAQNLMKNMPFEPDAATWGALL 582
+D A+ + + ++ D +W ++
Sbjct: 190 VDVAREVFDGILYK-DMVSWTGMV 212
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/661 (38%), Positives = 390/661 (59%), Gaps = 45/661 (6%)
Query: 36 PSKKTLKRHLNS-KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVS 94
P+ L++HL+ S N + + IT H RNG A +F+ MP ++++S
Sbjct: 5 PTTLLLQKHLSRLNSSNTQGNRTTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAIS 64
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL--SAARNLFEMMPKR 152
+ AM++ Y NG + AR++F++MPQR S+N MI+ Y R+ + A LF M +R
Sbjct: 65 WTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRER 124
Query: 153 DVVSWNTMLSGYAQNGYADAARRIF-DRMLE-KNEISWNGLLAAYVQNGRIEEACMLFES 210
+ +S+ M++G A+ G D A ++ + +E ++ + N L++ Y++ GR+EEA +FE
Sbjct: 125 NSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEG 184
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+V+SW+S++ G+ K+ ++G A+ +F+RMP R+ V+W MI G+ + LF
Sbjct: 185 MGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLF 244
Query: 271 ----EEAPVK------------------------------------DVFTWTAMVSGYVQ 290
+E VK DVF A++ Y +
Sbjct: 245 LRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCR 304
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
V EAR IFD M K+ VSWNA+IAGYVQ ++ LFE K+V SW TMITG+
Sbjct: 305 FSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGF 364
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ G++ + LF MP+ D I+W A+I+G+ +G E+++ FIEM R R N +
Sbjct: 365 SNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLS 424
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
SVLS A LA+L G Q+H +VK+G E + N+L+ MY KCG+V + + F I
Sbjct: 425 SVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSP 484
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
+++S+N+MI G+A++GFG++AL LF M G KP++IT +G+LSAC+H GL+E+G YF
Sbjct: 485 NIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYF 544
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
SM Y + P HY C+VDLLGRAG LD+A +L+++MP EP + WGALLGA R++ +
Sbjct: 545 KSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLR 604
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
++A+ AA+ IF++EP+NA Y +LS LY+++GR D +VR+ +GVKK GYSW+
Sbjct: 605 LDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWII 664
Query: 651 V 651
V
Sbjct: 665 V 665
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/683 (37%), Positives = 375/683 (54%), Gaps = 64/683 (9%)
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ L A ++FE + + +++ WNTM G+A + +A +++ M+ GLL
Sbjct: 11 EGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISL------GLLPNSY 64
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ ++C ++ + + L G+ D ++I+
Sbjct: 65 TFPFLLKSCAKLKASKEGLQIHGHVLKLGYE-----------------LDLYVHTSLISM 107
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
Y QN L +A ++F+ + +DV ++TA+V+GY G ++ AR +FD +P K+ VSWNAMI
Sbjct: 108 YVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMI 167
Query: 317 AGYVQTKRMDMARELFEAMTCKNV--------------------------ASW------- 343
+GYV+T A ELF+ M NV SW
Sbjct: 168 SGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFG 227
Query: 344 ------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
N +I Y++ GE+ A LF + D ISW +I GY +++L LF EM
Sbjct: 228 SNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEM 287
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAGCFVGNALLVMYCKCG 455
R GE N S+L CA+L ++++G+ +H + K G + +L+ MY KCG
Sbjct: 288 LRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCG 347
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+E A+ F ++ K + +WN MI G+A HG A +F M+ IKPDDIT VG+LS
Sbjct: 348 DIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH G+++ G F SM +Y + P +HY CM+DLLG +G EA+ ++ M EPD
Sbjct: 408 ACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDG 467
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W +LL AC+++G EL EK A+ +F++EP N G YVLLSN+YA +GRW +V+++R +
Sbjct: 468 VIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLL 527
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
D+G+KKV G S +E+ + VH F +GD HP IY LEE+E L++ GFV T VL
Sbjct: 528 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVL 587
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
++ EE KE LR+HSEKLA+A+G++S + ++KNLRVC +CH A K ISKI R
Sbjct: 588 QEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKRE 647
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
II RD RFHHF G CSC DYW
Sbjct: 648 IIARDRTRFHHFRDGVCSCNDYW 670
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/562 (23%), Positives = 239/562 (42%), Gaps = 118/562 (20%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+ ++IS Y+ N +L+ A +VFD+ RD+VS+ +++GY + +ARN+F+ +P +DV
Sbjct: 101 HTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDV 160
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACMLFES 210
VSWN M+SGY + G A +F M++ N E + +++A ++G IE +
Sbjct: 161 VSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSW 220
Query: 211 KA------NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
A N ++V N+L+ + K + A +F + +D +SWN +I GY N
Sbjct: 221 IADHGFGSNLKIV--NALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYK 278
Query: 265 EAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA------ 314
EA LF+E + T +++ G +D R I + ++ NA
Sbjct: 279 EALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 338
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+I Y + ++ A ++F +M K++ +WN MI G+A G A ++F RM +++
Sbjct: 339 LIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEI--- 395
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+ + F +LS C++ L+LG+ + +
Sbjct: 396 ----------------------------KPDDITFVGLLSACSHAGMLDLGRHIFRSMT- 426
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
H ++ + + + MI G K+A
Sbjct: 427 ---------------------------HNYK--ITPKLEHYGCMIDLLGHSGLFKEAE-- 455
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK-HYTCMVDLL 553
E + T+ ++PD + +L AC G VE G ++ ++ + + PN+ Y + ++
Sbjct: 456 -EMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL---FKIEPNNPGSYVLLSNIY 511
Query: 554 GRAGRLDEAQNL--------MKNMP----FEPDAATWGALLGAC------RLYGKTELAE 595
AGR +E + MK +P E D+ ++G +YG E E
Sbjct: 512 ATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 571
Query: 596 ----------KAAEVIFEMEPE 607
+EV+ EME E
Sbjct: 572 VLLQEAGFVPDTSEVLQEMEEE 593
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 193/410 (47%), Gaps = 40/410 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ D+ I+ +++N + A VF+ R VSY A+++GY G ++ AR +FD+
Sbjct: 95 ELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDE 154
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAA 173
+P +D+VSWN MISGYV + A LF+ M K +V + T++S A++G +
Sbjct: 155 IPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELG 214
Query: 174 RR----IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R+ I D N N L+ Y + G +E AC LF + +V+SWN L+GG+
Sbjct: 215 RQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHL 274
Query: 230 KRLGDAKWIFDRMPVRDEVSWN--TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFTW- 281
+A +F M +R S N TM++ +L ++ + +K V
Sbjct: 275 NLYKEALLLFQEM-LRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNAS 333
Query: 282 ---TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
T+++ Y + G ++ A +F++M K+ +WNAMI G+ R + A ++F M
Sbjct: 334 SLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKN 393
Query: 339 NVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSED 389
+ ++ +++ + +G + R++F M + I+ + +I SG
Sbjct: 394 EIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSG---- 449
Query: 390 SLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C ++ELG++ L K+
Sbjct: 450 ---LFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKI 496
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/740 (33%), Positives = 403/740 (54%), Gaps = 50/740 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D++QWN +++ A+ +F M R + + N I L++ + +
Sbjct: 54 DVQQWNQKLSSANSPYPLQEAVQLFYLM-RHTRIRLNQFIFASLISAAASLGDNHYGESI 112
Query: 120 ---------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ D++ N ++ Y++ +S+ F+ M ++ S N +LSG+
Sbjct: 113 HACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETC 172
Query: 171 DAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
D RI ++L E N ++ +L G + E ++ G
Sbjct: 173 DQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEG---------------KAIHGQV 217
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
+K D+ WN+++ YA+ A ++F E P +DV +WTA+++
Sbjct: 218 IKSGINPDSHL------------WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 265
Query: 287 GYVQNGKVDEARMIFDAMPE---KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW 343
G+V G R+ + E N ++ +++ +D+ +++ A KN
Sbjct: 266 GFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV-HAQIVKNSLDG 324
Query: 344 N-----TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
N ++ YA++ + A +F+R+ + D +W I+AGYAQ G E +++ FI+M+
Sbjct: 325 NDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQ 384
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
R G + N S LS C+ +A+L+ G+QLH +K G FV +AL+ MY KCG VE
Sbjct: 385 REGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVE 444
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
+A F+ +V +D +SWNT+I GY++HG G AL FE+M G PD++T +G+LSACS
Sbjct: 445 DAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACS 504
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H GL+E+G ++F S+++ YG+ P +HY CMVD+LGRAG+ E ++ ++ M + W
Sbjct: 505 HMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIW 564
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
+LGAC+++G E E+AA +FE+EPE Y+LLSN++AA G W DV+ VR M R
Sbjct: 565 ETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTR 624
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
GVKK G SW+EV +VH F D HP+ I+ L++L KL G+ +T VLH+V
Sbjct: 625 GVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNV 684
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+ EK+ +L YHSE+LA+A+ +LS + IR+ KNLR+C DCH+ +K IS+I + +++
Sbjct: 685 SDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVV 744
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD N FHHF GSCSC ++W
Sbjct: 745 RDINCFHHFKNGSCSCQNFW 764
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 167/396 (42%), Gaps = 47/396 (11%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
R+ + D W+++V+ YV+ + AR + + MP ++ WN ++ +
Sbjct: 14 RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQE 73
Query: 328 ARELF----------------------------------EAMTCK-----NVASWNTMIT 348
A +LF A CK ++ N +T
Sbjct: 74 AVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
Y ++ + + F M + S +++G+ + + R+ I++ G N
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F S+L TCA+ L GK +HGQ++K G + N+L+ +Y KCGS A F EI
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++DV+SW +I G+ G+G L +F M G P+ T + IL +CS V+ G +
Sbjct: 254 ERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+ ++ + N T +VD+ + L++A+ + N + D W ++ Y
Sbjct: 313 VHAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDAETIF-NRLIKRDLFAWTVIVAG---Y 367
Query: 589 GKTELAEKAAEVIFEMEPENA--GMYVLLSNLYAAS 622
+ EKA + +M+ E + L S+L S
Sbjct: 368 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCS 403
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
K++ +++K G + ++L+ +Y KC S++ A EE+ +DV WN ++
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
++A+ LF M+ I+ + ++SA + G G E ++ YG +
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYG-ESIHACVCKYGFESDILI 127
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
V + + ++ K M E A+ L G C TE ++ ++ ++
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFC----DTETCDQGPRILIQLL 183
Query: 606 PE--NAGMYVLLSNLYAASGRWGDVSK 630
E MY +S L + + GD+++
Sbjct: 184 VEGFEPNMYTFISILKTCASK-GDLNE 209
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/630 (38%), Positives = 373/630 (59%), Gaps = 43/630 (6%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDE 247
+ +GRI++A F S+ + ++ L+ +K L K + + +D+
Sbjct: 38 FTSLCNDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDK 97
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
N ++ Y++ + LF P ++V ++ +++GY+Q G ++ A+ +FD M E+
Sbjct: 98 FISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSER 157
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAM--------------TCKNVASWNTMITG---- 349
N +WNAMIAG Q + A LF+ M + A +++ G
Sbjct: 158 NIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVH 217
Query: 350 ---------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
Y +SG ++ L MP ++W +IAG AQ+G E
Sbjct: 218 ACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPE 277
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ L + MK G R ++ F SVLS C+ LA+L G+Q+H +++K G + V ++L+
Sbjct: 278 EVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLI 337
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY + G +E++ AF + + DV+ W++MIA Y HG G++AL LF M+ + ++ +++
Sbjct: 338 SMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEV 397
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + +L ACSH+GL EKGTEYF M + Y + P +HYTC+VDLLGRAGRL+EA+ ++++
Sbjct: 398 TFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRS 457
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MP +PD W LL AC+L+ + E+AE+ +E I +++P +A YVLLSN++A++ W +V
Sbjct: 458 MPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNV 517
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
S++R MRDR V+K G SWLE++N VH FS+GD HP+ I YL+EL +LKQ G+V
Sbjct: 518 SQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYV 577
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
VLHD+ EEKE+ L +HSEK A+A+ +++ PIRVMKNLRVC+DCHNAIK I
Sbjct: 578 PELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCI 637
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S+I R II+RD +RFHHF G CSCG+YW
Sbjct: 638 SRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 191/431 (44%), Gaps = 65/431 (15%)
Query: 68 ITTHMRN-----GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
I+ H+ N G S+L +F++MPRR+ +S+N +I+GYL G L+ A+++FD+M +R+
Sbjct: 99 ISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERN 158
Query: 123 LVSWNVMISGYVR----NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
+ +WN MI+G + ++LS + ++ + D + ++L G A
Sbjct: 159 IATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCA------------- 205
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV--VSWNSLMGGFVKQKRLGDAK 236
LLA G+ AC+L K +E+ V +SL ++K L D +
Sbjct: 206 --------GLRSLLA-----GQEVHACLL---KCGFELSSVVGSSLAHMYIKSGSLSDGE 249
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+ MP+R V+WNT+I G AQN P + + + M + K+
Sbjct: 250 KLIKSMPIRTVVAWNTLIAGKAQNG-----------CPEEVLNQYNMMKMAGFRPDKITF 298
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
+ A E T+ I E+ +A +A +++I+ Y++SG +
Sbjct: 299 VS-VLSACSELATLGQGQQIHA-----------EVIKAGASSVLAVVSSLISMYSRSGCL 346
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+ F D + W+++IA Y G E++L LF +M+ N F S+L C
Sbjct: 347 EDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYAC 406
Query: 417 ANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVIS 474
++ E G + +V K + ++ + + G +EEA + V D I
Sbjct: 407 SHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGII 466
Query: 475 WNTMIAGYARH 485
W T++A H
Sbjct: 467 WKTLLAACKLH 477
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 152/367 (41%), Gaps = 94/367 (25%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISG---YLLNGQLDPARQVFD 116
++ +N+ I +++ G +SA +F+ M R+ ++NAMI+G + N Q A +F
Sbjct: 127 NVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQ---ALSLFK 183
Query: 117 QM------PQ--------RDLVSWNVMISG-------------------------YVRNK 137
+M P R +++G Y+++
Sbjct: 184 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSG 243
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA 193
SLS L + MP R VV+WNT+++G AQNG + ++ M ++I++ +L+
Sbjct: 244 SLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLS 303
Query: 194 A-----------------------------------YVQNGRIEEACMLFESKANWEVVS 218
A Y ++G +E++ F + N++VV
Sbjct: 304 ACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVL 363
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
W+S++ + R +A +F +M +EV++ +++ + + + F+
Sbjct: 364 WSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMV 423
Query: 275 VK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMA 328
K + +T +V + G+++EA + +MP + + + W ++A K +MA
Sbjct: 424 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMA 483
Query: 329 RELFEAM 335
+ E +
Sbjct: 484 ERISEEI 490
>gi|147811204|emb|CAN74558.1| hypothetical protein VITISV_014799 [Vitis vinifera]
Length = 405
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/384 (62%), Positives = 288/384 (75%), Gaps = 37/384 (9%)
Query: 360 RNLFDRMPQHDCISWAAIIAGY-AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
R +FD MP + SW AIIAGY +G R F +R P +S A
Sbjct: 4 RRVFDGMPXKNSXSWNAIIAGYLCNNGDIRAQARNF---------FDRMPQRDSISWAAI 54
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+A G+ +V LV +AY FE I +K+V+SWNTM
Sbjct: 55 IA---------------GYAQSGYVWKHRLV---------DAYIVFEGIEEKEVVSWNTM 90
Query: 479 IAGYARH-GFGKDAL-MLFESMKTVGIKPDDIT-MVGILSACSHTGLVEKGTEYFYSMNR 535
IAGYA+ GFGK+AL +LFESMK G ++ MVG+LSACSHTGLV+KGTEYFYSM +
Sbjct: 91 IAGYAKTWGFGKEALRLLFESMKKTGTSYQMMSAMVGVLSACSHTGLVDKGTEYFYSMTQ 150
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
DYG+ NSKHYTCM+DLLGRAGRLD+AQNLMKNMPFEPDAATWGALLGA R++G TEL E
Sbjct: 151 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE 210
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
KAA++IFEMEP+N+GMYVLLSNLYAASGRWGDV ++RL+MRDRGVKKV GYSW+EVQNK+
Sbjct: 211 KAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKI 270
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
HTF+VGD++HPE+DRIY +LEEL+ K+K++G+V STKLVLHDV EEEK HML+YHSEKLA
Sbjct: 271 HTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLA 330
Query: 716 VAYGILSIPAGRPIRVMKNLRVCE 739
VA+GIL+IPAGRPIRV+KNLR+ E
Sbjct: 331 VAFGILAIPAGRPIRVIKNLRMSE 354
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 22/234 (9%)
Query: 298 RMIFDAMPEKNTVSWNAMIAGYV--QTKRMDMARELFEAMTCKNVASWNTMITGYAQSG- 354
R +FD MP KN+ SWNA+IAGY+ AR F+ M ++ SW +I GYAQSG
Sbjct: 4 RRVFDGMPXKNSXSWNAIIAGYLCNNGDIRAQARNFFDRMPQRDSISWAAIIAGYAQSGY 63
Query: 355 ----EITHARNLFDRMPQHDCISWAAIIAGYAQS-GYSEDSLRLFIE-MKRYGERLN-RS 407
+ A +F+ + + + +SW +IAGYA++ G+ +++LRL E MK+ G S
Sbjct: 64 VWKHRLVDAYIVFEGIEEKEVVSWNTMIAGYAKTWGFGKEALRLLFESMKKTGTSYQMMS 123
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
VLS C++ ++ G + + + G A ++ + + G +++A + +
Sbjct: 124 AMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 183
Query: 467 I-VDKDVISWNTMIAGYARHG---FG-KDALMLFESMKTVGIKPDDITMVGILS 515
+ + D +W ++ HG G K A M+FE ++PD+ M +LS
Sbjct: 184 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE------MEPDNSGMYVLLS 231
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 24/216 (11%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLN-GQLDP-ARQVFDQMPQRDLVSWNVMI-----SGYVR 135
VF+ MP ++S S+NA+I+GYL N G + AR FD+MPQRD +SW +I SGYV
Sbjct: 6 VFDGMPXKNSXSWNAIIAGYLCNNGDIRAQARNFFDRMPQRDSISWAAIIAGYAQSGYVW 65
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN-GYADAARRIFDRMLEKNEISWN----- 189
L A +FE + +++VVSWNTM++GYA+ G+ A R+ ++K S+
Sbjct: 66 KHRLVDAYIVFEGIEEKEVVSWNTMIAGYAKTWGFGKEALRLLFESMKKTGTSYQMMSAM 125
Query: 190 -GLLAAYVQNGRIEEACMLFESKANWEVVSWNS-----LMGGFVKQKRLGDAKWIFDRMP 243
G+L+A G +++ F S ++ NS ++ + RL DA+ + MP
Sbjct: 126 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 185
Query: 244 VR-DEVSWNTMI--TGYAQNNYLAE--AQRLFEEAP 274
D +W ++ + N L E A+ +FE P
Sbjct: 186 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEP 221
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 54/215 (25%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNN--YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG--- 292
+FD MP ++ SWN +I GY NN A+A+ F+ P +D +W A+++GY Q+G
Sbjct: 6 VFDGMPXKNSXSWNAIIAGYLCNNGDIRAQARNFFDRMPQRDSISWAAIIAGYAQSGYVW 65
Query: 293 --KVDEARMIFDAMPEKNTVSWNAMIAGYVQ----------------------------- 321
++ +A ++F+ + EK VSWN MIAGY +
Sbjct: 66 KHRLVDAYIVFEGIEEKEVVSWNTMIAGYAKTWGFGKEALRLLFESMKKTGTSYQMMSAM 125
Query: 322 ---------TKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
T +D E F +MT N + MI ++G + A+NL MP
Sbjct: 126 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 185
Query: 368 -QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMK 398
+ D +W A++ + + E + ++ EM+
Sbjct: 186 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEME 220
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKS--LSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
R+VFD MP ++ SWN +I+GY+ N + ARN F+ MP+RD +SW +++GYAQ+GY
Sbjct: 4 RRVFDGMPXKNSXSWNAIIAGYLCNNGDIRAQARNFFDRMPQRDSISWAAIIAGYAQSGY 63
Query: 170 ADAARR-----IFDRMLEKNEISWNGLLAAYVQN-GRIEEAC-MLFES--KANWEVVSWN 220
R +F+ + EK +SWN ++A Y + G +EA +LFES K +
Sbjct: 64 VWKHRLVDAYIVFEGIEEKEVVSWNTMIAGYAKTWGFGKEALRLLFESMKKTGTSYQMMS 123
Query: 221 SLMG--------GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+++G G V + D + + MI + L +AQ L +
Sbjct: 124 AMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 183
Query: 273 APVK-DVFTWTAMVSGYVQNGKVD----EARMIFDAMPE 306
P + D TW A++ +G + A+MIF+ P+
Sbjct: 184 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPD 222
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 34/209 (16%)
Query: 64 WNVAITTHM-RNGCCDS-ALHVFNSMPRRSSVSYNAMISGYLLNG-----QLDPARQVFD 116
WN I ++ NG + A + F+ MP+R S+S+ A+I+GY +G +L A VF+
Sbjct: 18 WNAIIAGYLCNNGDIRAQARNFFDRMPQRDSISWAAIIAGYAQSGYVWKHRLVDAYIVFE 77
Query: 117 QMPQRDLVSWNVMISGYVRNKSLS--AARNLFEMMPKRDVVSWNTM------LSGYAQNG 168
+ ++++VSWN MI+GY + A R LFE M K+ S+ M LS + G
Sbjct: 78 GIEEKEVVSWNTMIAGYAKTWGFGKEALRLLFESM-KKTGTSYQMMSAMVGVLSACSHTG 136
Query: 169 YADAARRIFDRMLEKNEISWNG-----LLAAYVQNGRIEEA-----CMLFESKANWEVVS 218
D F M + I+ N ++ + GR+++A M FE A +
Sbjct: 137 LVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA----AT 192
Query: 219 WNSLMGG--FVKQKRLGD--AKWIFDRMP 243
W +L+G LG+ AK IF+ P
Sbjct: 193 WGALLGASRIHGNTELGEKAAKMIFEMEP 221
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 279/787 (35%), Positives = 416/787 (52%), Gaps = 103/787 (13%)
Query: 92 SVSYNAMI-----SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
SV+Y ++ +G L++G+L + + L N ++ Y + A+ LF
Sbjct: 19 SVTYTKLVQCSTRTGSLIHGKLAHMHMI-KTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIF----------DRMLEKNEIS--------- 187
+ MPKR+VVSWN+++SGY Q G+ +F D+ N +S
Sbjct: 78 DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137
Query: 188 --------------------WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV 227
N L+ Y + GRI+ A ++FES + VSWNSL+ G+V
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 197
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYA----QNNYLA--EAQRLFEEAPVK----- 276
+ + + +M +R ++ N+ G A +N+ + E ++ VK
Sbjct: 198 RIGSNDEMLRLLVKM-LRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDL 256
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM--DMARE---L 331
DV TA++ Y + G +++A IF MP+ N V +NAMIAG++Q + M + A E L
Sbjct: 257 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 316
Query: 332 FEAM-----------------TCKNVASW----------------------NTMITGYAQ 352
F M C + ++ N ++ Y+
Sbjct: 317 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 376
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG I F P+ D +SW ++I G+ Q+G E L LF E+ G + + + +
Sbjct: 377 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 436
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
LS CANLA+++ G+Q+H +K G + N+ + MY KCG ++ A F+E + D+
Sbjct: 437 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDI 496
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SW+ MI+ A+HG K+A+ LFE MK GI P+ IT +G+L ACSH GLVE+G YF
Sbjct: 497 VSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEI 556
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M +D+G+ PN KH C+VDLLGRAGRL EA++ + + FE D W +LL ACR++ T+
Sbjct: 557 MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATD 616
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
++ AE + E+EPE A YVLL N+Y +G +++R M+DRGVKK G SW+EV
Sbjct: 617 TGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVG 676
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH-MLRYHS 711
N VH+F GD HP IY LEE+ ++K+ ++ KLV + K++ M+ YHS
Sbjct: 677 NVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHS 735
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EKLAV +GI+S+P P+RVMKNLR C CH +K S++ R IILRD RFH F GS
Sbjct: 736 EKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGS 795
Query: 772 CSCGDYW 778
CSCGDYW
Sbjct: 796 CSCGDYW 802
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 126/562 (22%), Positives = 210/562 (37%), Gaps = 148/562 (26%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N + + + G D A +F+ MP+R+ VS+N++ISGY G +F + DL
Sbjct: 58 NNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLR 117
Query: 124 --------------------------------------VSWNVMISGYVRNKSLSAARNL 145
+ N +I Y + + AR +
Sbjct: 118 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLV 177
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA------- 194
FE + D VSWN++++GY + G D R+ +ML N + L A
Sbjct: 178 FESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSS 237
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
++ G++ C + + + +VV +L+ + K L DA IF MP + V +N MI
Sbjct: 238 SIECGKMLHGCAV-KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI 296
Query: 255 TGYAQNNYLA-----EAQRLFEEAPVK--------------------------------- 276
G+ Q +A EA LF E +
Sbjct: 297 AGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIF 356
Query: 277 ------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
D F A+V Y +G +++ F + P+ + VSW ++I G+VQ + +
Sbjct: 357 KYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLT 416
Query: 331 LFEAM-----------------TCKNVAS----------------------WNTMITGYA 351
LF + C N+A+ N+ I YA
Sbjct: 417 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 476
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G+I A F D +SW+ +I+ AQ G +++++ LF MK G N F
Sbjct: 477 KCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLG 536
Query: 412 VLSTCAN-------LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA-YHA 463
VL C++ L E+ K+ HG V A C V + + G + EA
Sbjct: 537 VLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSA-CIVD-----LLGRAGRLAEAESFI 590
Query: 464 FEEIVDKDVISWNTMIAGYARH 485
+ + D + W ++++ H
Sbjct: 591 MDSGFEGDPVMWRSLLSACRVH 612
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
G L+ +T ++ SL GK H ++K F+ F+ N LL MYCKCG + A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F+ + ++V+SWN++I+GY + GF + + LF+ + ++ D T LS C T
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
+ G +++ G+ ++D+ + GR+D A+ + ++ E D+ +W +
Sbjct: 134 LDLRLG-RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD-ELDSVSWNS 191
Query: 581 LLGA 584
L+
Sbjct: 192 LIAG 195
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 122/314 (38%), Gaps = 58/314 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL-------------- 103
D D+ + T+ + G + A +F MP + V YNAMI+G+L
Sbjct: 255 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 314
Query: 104 ------LNGQLDPAR------------------------QVFDQMPQRDLVSWNVMISGY 133
+ + P+ Q+F Q D N ++ Y
Sbjct: 315 YLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 374
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWN 189
+ S+ F PK DVVSW +++ G+ QNG + +F +L + +E + +
Sbjct: 375 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 434
Query: 190 GLLA-----AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
+L+ A V++G A + N+ ++ NS + + K + A F
Sbjct: 435 IMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQ-NSQICMYAKCGDIDSANMTFKETKN 493
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
D VSW+ MI+ AQ+ EA LFE + T+ ++ G V+E
Sbjct: 494 PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 553
Query: 301 FDAMPEKNTVSWNA 314
F+ M + + ++ N
Sbjct: 554 FEIMKKDHGITPNV 567
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 28/240 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ W I H++NG + L +F+ + + + + M+S + Q+
Sbjct: 394 DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIH 453
Query: 116 DQMPQRDLVSWNVM----ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + ++ ++ I Y + + +A F+ D+VSW+ M+S AQ+G A
Sbjct: 454 AYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAK 513
Query: 172 AARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN------- 220
A +F+ M + N I++ G+L A G +EE FE ++ N
Sbjct: 514 EAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACI 573
Query: 221 -SLMGGFVKQKRLGDAK-WIFDRMPVRDEVSWNTMITG----YAQNNYLAEAQRLFEEAP 274
L+G + RL +A+ +I D D V W ++++ A + A+R+ E P
Sbjct: 574 VDLLG---RAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEP 630
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/643 (38%), Positives = 357/643 (55%), Gaps = 80/643 (12%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---- 270
E ++ +L + K +R DA+ +FDRMPVRD V+WN ++ GYA+N A +
Sbjct: 93 EALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQ 152
Query: 271 -EEAPVKDVFTW-----------------------------------TAMVSGYVQNGKV 294
EE D T TA++ Y + G +
Sbjct: 153 EEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDI 212
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT------------------ 336
AR++FD MP KN+VSWNAMI GY Q A LF M
Sbjct: 213 RAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQAC 272
Query: 337 ----C-----------------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
C NV+ N +IT Y++ + A ++FD + + +SW
Sbjct: 273 GELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWN 332
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+I G AQ+G SED++RLF M+ + + SV+ A+++ + +HG +++
Sbjct: 333 AMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRL 392
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
+ +V AL+ MY KCG V A F ++ VI+WN MI GY HGFGK A+ LF
Sbjct: 393 HLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELF 452
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
E MK++GI P++ T + +LSACSH GLV++G EYF SM DYG+ P +HY MVDLLGR
Sbjct: 453 EEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGR 512
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
AG+LDEA ++ MP +P + +GA+LGAC+L+ ELAE++A+ IFE+ P+ +VLL
Sbjct: 513 AGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLL 572
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
+N+YA + W DV++VR M G++K G+S ++++N++HTF G T H + IY+ L
Sbjct: 573 ANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRL 632
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
+L ++K G+V T + HDV ++ K +L HSEKLA+A+G++ G I++ KNL
Sbjct: 633 AKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNL 691
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RVC DCHNA K IS + GR II+RD RFHHF G CSCGDYW
Sbjct: 692 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 202/464 (43%), Gaps = 89/464 (19%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD--------LVS------ 125
A VF+ MP R V++NA+++GY NG A ++ +M + + LVS
Sbjct: 113 ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 126 --------------------------WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
++ Y + + AAR +F+ MP ++ VSWN
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 160 MLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEAC----MLFESK 211
M+ GYAQNG + A +F+RM+E+ ++S L A + G ++E +L
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+ V N+L+ + K KR+ A +FD + R +VSWN MI G AQN +A RLF
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 272 EAPVKDV----FTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGYVQTK 323
+++V FT +++ +AR I +++ A+I Y +
Sbjct: 353 RMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCG 412
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
R+++AR LF + ++V +WN MI GY G
Sbjct: 413 RVNIARILFNSARERHVITWNAMIHGYGSHG----------------------------- 443
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCF 442
+ + ++ LF EMK G N + F SVLS C++ ++ G++ + + G E G
Sbjct: 444 --FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGME 501
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
++ + + G ++EA+ +++ +D + + M+ H
Sbjct: 502 HYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLH 545
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L F+ M G FTS+L CA L G+ +H QL G ++ AL
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL-MLFESMKTVGIKPDDI 508
MY KC +A F+ + +D ++WN ++AGYAR+G + A+ M+ + G +PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 509 TMVGIL 514
T+V +L
Sbjct: 163 TLVSVL 168
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 53/275 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ N IT + + D A HVF+ + RR+ VS+NAMI G NG + A ++F +
Sbjct: 294 DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTR 353
Query: 118 MP---------------------------------------QRDLVSWNVMISGYVRNKS 138
M +D+ +I Y +
Sbjct: 354 MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
++ AR LF +R V++WN M+ GY +G+ AA +F+ M + NE ++ +L+A
Sbjct: 414 VNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473
Query: 195 YVQNGRIEEACMLFES-KANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVS 249
G ++E F S K ++ + G V + +L +A +MP+ +S
Sbjct: 474 CSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLS 533
Query: 250 WNTMITGYA---QNNYLAE--AQRLFEEAPVKDVF 279
+ G +N LAE AQ++FE P + V+
Sbjct: 534 VYGAMLGACKLHKNVELAEESAQKIFELGPQEGVY 568
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/661 (38%), Positives = 390/661 (59%), Gaps = 45/661 (6%)
Query: 36 PSKKTLKRHLNS-KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVS 94
P+ L++HL+ S N + + IT H RNG A +F+ MP ++++S
Sbjct: 84 PTTLLLQKHLSRLNSSNTQGNRTTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAIS 143
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL--SAARNLFEMMPKR 152
+ AM++ Y NG + AR++F++MPQR S+N MI+ Y R+ + A LF M +R
Sbjct: 144 WTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRER 203
Query: 153 DVVSWNTMLSGYAQNGYADAARRIF-DRMLE-KNEISWNGLLAAYVQNGRIEEACMLFES 210
+ +S+ M++G A+ G D A ++ + +E ++ + N L++ Y++ GR+EEA +FE
Sbjct: 204 NSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEG 263
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+V+SW+S++ G+ K+ ++G A+ +F+RMP R+ V+W MI G+ + LF
Sbjct: 264 MGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLF 323
Query: 271 ----EEAPVK------------------------------------DVFTWTAMVSGYVQ 290
+E VK DVF A++ Y +
Sbjct: 324 LRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCR 383
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
V EAR IFD M K+ VSWNA+IAGYVQ ++ LFE K+V SW TMITG+
Sbjct: 384 FSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGF 443
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ G++ + LF MP+ D I+W A+I+G+ +G E+++ FIEM R R N +
Sbjct: 444 SNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLS 503
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
SVLS A LA+L G Q+H +VK+G E + N+L+ MY KCG+V + + F I
Sbjct: 504 SVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSP 563
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
+++S+N+MI G+A++GFG++AL LF M G KP++IT +G+LSAC+H GL+E+G YF
Sbjct: 564 NIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYF 623
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
SM Y + P HY C+VDLLGRAG LD+A +L+++MP EP + WGALLGA R++ +
Sbjct: 624 KSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLR 683
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
++A+ AA+ IF++EP+NA Y +LS LY+++GR D +VR+ +GVKK GYSW+
Sbjct: 684 LDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWII 743
Query: 651 V 651
V
Sbjct: 744 V 744
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/566 (42%), Positives = 336/566 (59%), Gaps = 35/566 (6%)
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM--- 304
V + + YA L + LF VF WTA++ G+ G ++A + M
Sbjct: 10 VPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQ 69
Query: 305 -PEKNTVSWNAMIAG----------------------YVQTKRMDM---------ARELF 332
E N ++++++ YV+T +D+ A++LF
Sbjct: 70 GVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+ M K++ S M+T YA+ GE+ AR LFD M + D + W +I GY Q+G ++L
Sbjct: 130 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALV 189
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF M + + N SVLS C L +LE G+ +H + G + VG AL+ MY
Sbjct: 190 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 249
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCGS+E+A F++I DKDV++WN+MI GYA GF ++AL LF+SM +G+ P +IT +G
Sbjct: 250 KCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIG 309
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
ILSAC H+G V +G + F M +YG+ P +HY CMV+LLGRAG +++A L+KNM E
Sbjct: 310 ILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE 369
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
PD WG LLGACRL+GK L EK E++ + N+G Y+LLSN+YAA G W V+++R
Sbjct: 370 PDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLR 429
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
M+D GVKK G S +EV NKVH F G HP++ IY LEE+ LK G+ T
Sbjct: 430 TMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTD 489
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
+VLHD+GE EKE L HSEKLA+A+G+++ G I+++KNLRVC DCH K ISKI
Sbjct: 490 IVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKIT 549
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
GR I++RD NRFHHF GSCSCGDYW
Sbjct: 550 GRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 155/331 (46%), Gaps = 25/331 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ Y G + A+Q+FD MP++ LVS M++ Y ++ L AAR LF+ M +RD V
Sbjct: 110 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 169
Query: 156 SWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CML 207
WN M+ GY QNG + A +F RML + NE++ +L+A Q G +E +
Sbjct: 170 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 229
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + V +L+ + K L DA+ +FD++ +D V+WN+MI GYA + EA
Sbjct: 230 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEAL 289
Query: 268 RLFEEA------PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMI 316
+LF+ P T+ ++S +G V E IF+ M ++ + + M+
Sbjct: 290 QLFKSMCRMGLHPTN--ITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMV 347
Query: 317 AGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
+ ++ A EL + M + + W T++ G+I + + + + +
Sbjct: 348 NLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSG 407
Query: 376 AIIA---GYAQSGYSEDSLRLFIEMKRYGER 403
I YA G + RL MK G +
Sbjct: 408 TYILLSNIYAAVGNWDGVARLRTMMKDSGVK 438
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 160/382 (41%), Gaps = 55/382 (14%)
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
V + + YA G D + +F R + W ++ + G E+A +
Sbjct: 10 VPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQ 69
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVRDEVSWNT-MITGYAQNNYLAEAQRLF 270
V +K + K + ++ ++ T ++ YA+ + AQ+LF
Sbjct: 70 GVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ P K + + TAM++ Y ++G++D AR++FD M E++ V WN MI GY Q + A
Sbjct: 130 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALV 189
Query: 331 LFEAM-----------------TCK----------------------NVASWNTMITGYA 351
LF M C NV ++ Y+
Sbjct: 190 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 249
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G + AR +FD++ D ++W ++I GYA G+S+++L+LF M R G F
Sbjct: 250 KCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIG 309
Query: 412 VLSTCANLASLELGKQLHGQLV-KVGFEA-----GCFVGNALLVMYCKCGSVEEAYHAFE 465
+LS C + + G + ++ + G E GC V + + G VE+AY +
Sbjct: 310 ILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVN-----LLGRAGHVEQAYELVK 364
Query: 466 EI-VDKDVISWNTMIAGYARHG 486
+ ++ D + W T++ HG
Sbjct: 365 NMNIEPDPVLWGTLLGACRLHG 386
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 154/311 (49%), Gaps = 24/311 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + + R G SA +F++MP +S VS AM++ Y +G+LD AR +FD
Sbjct: 103 DSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDG 162
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAA 173
M +RD V WNVMI GY +N + A LF M K + V+ ++LS Q G ++
Sbjct: 163 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 222
Query: 174 RRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
R + +E N I +N L+ Y + G +E+A ++F+ + +VV+WNS++ G+
Sbjct: 223 RWVHS-YIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAM 281
Query: 229 QKRLGDAKWIFD---RMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT---- 280
+A +F RM + +++ +++ + ++ E +F + +KD +
Sbjct: 282 XGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNK--MKDEYGIEPK 339
Query: 281 ---WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ MV+ + G V++A + M E + V W ++ ++ + ++ E +
Sbjct: 340 IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLV 399
Query: 337 CKNVASWNTMI 347
+N+A+ T I
Sbjct: 400 DQNLANSGTYI 410
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/571 (41%), Positives = 359/571 (62%), Gaps = 14/571 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY----LAEAQRLFEEAPV 275
N+L+ + K + DA +F+++P RD +SW +++T Q N L+ +F++ +
Sbjct: 42 NNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGL 101
Query: 276 K-DVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+ D + + +V G ++ GK A I + + + V ++++ Y + D+ R
Sbjct: 102 QPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVK-SSLVDMYAKCGLPDIGR 160
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+F++++ KN SW MI+GYAQSG A LF +MP + +SW A+I+G QSG D
Sbjct: 161 VVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVD 220
Query: 390 SLRLFIEMKRYGERLNRSPF--TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
S LF+EM+ G + PF +S++ ANLA L LGKQ+H ++ +G+E+ FV NAL
Sbjct: 221 SFYLFMEMRSKGIDI-VDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNAL 279
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KC V A F +V +D++SW ++I G A+HG ++AL L+ M + G+KP++
Sbjct: 280 VDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNE 339
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T VG++ ACSH GLV KG +F SM +DYG+ P+ +HYTC++DLL R+G L+EA+NL+K
Sbjct: 340 VTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIK 399
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MPF+PD ATW ALL AC + T + + A+ + ++PE+ Y+LLSN+YA++ W
Sbjct: 400 AMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWES 459
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
VSKVR M VKK GYS + + + F G+T HP K+ I+ LEEL+ ++K+ G+
Sbjct: 460 VSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGY 519
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
+ T VLHD+ ++EKE L +HSE+LAVAYG+L G + ++KNLRVC DCH +K
Sbjct: 520 IPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKF 579
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS IV R I++RD NR+HHF G CSC ++W
Sbjct: 580 ISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 184/431 (42%), Gaps = 49/431 (11%)
Query: 19 HTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCD 78
++ + +LQ+ A P K L H+ ++ K N I + + G
Sbjct: 3 YSHLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLS-------NNLINMYGKCGLIQ 55
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP--------QRD------LV 124
AL++FN +P R +S+ ++++ N Q + P Q D LV
Sbjct: 56 DALNLFNQLPHRDPISWASILTA---NNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLV 112
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
++ + K + A F + P D V ++++ YA+ G D R +FD + K
Sbjct: 113 KACAILGAMKQGKQVHAT---FIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSK 169
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM- 242
N ISW +++ Y Q+GR +A LF+ ++SW +L+ G V+ D+ ++F M
Sbjct: 170 NSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMR 229
Query: 243 ----PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKV 294
+ D +++I A L +++ + +F A+V Y + V
Sbjct: 230 SKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDV 289
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGY 350
A+ IF M +++ VSW ++I G Q + A L+ M N ++ +I
Sbjct: 290 LAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYAC 349
Query: 351 AQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+ G ++ R F+ M + I+ + ++ ++SG+ E++ L +K + +
Sbjct: 350 SHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENL---IKAMPFKPD 406
Query: 406 RSPFTSVLSTC 416
+ + ++LS C
Sbjct: 407 EATWAALLSAC 417
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 115/239 (48%), Gaps = 14/239 (5%)
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L CA S +GK+LH ++K G + + N L+ MY KCG +++A + F ++ +D
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 473 ISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTE--- 528
ISW +++ + L +F +M K G++PD ++ AC+ G +++G +
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 529 -YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+ S D V+ +S +VD+ + G D + + ++ ++ +W A++
Sbjct: 130 TFIVSPVSDDDVVKSS-----LVDMYAKCGLPDIGRVVFDSIS-SKNSISWTAMISG--- 180
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
Y ++ A ++ +M +N + L + SG W D + ++MR +G+ V +
Sbjct: 181 YAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPF 239
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 270/785 (34%), Positives = 401/785 (51%), Gaps = 92/785 (11%)
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------DLVSWNVMISGYVRNKSL 139
++P+ S + ++ + G R V ++ QR D NV+++ Y + L
Sbjct: 41 ALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPL 100
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAY 195
+AAR LF+ MP+R++VS+ T++ GYA G + A +F R+ E N +L
Sbjct: 101 AAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVL 160
Query: 196 VQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
V C + +SL+ + + A+ +FD + +D V+W
Sbjct: 161 VAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWT 220
Query: 252 TMITGYAQNNYLAEAQRLFEE------APVKDVFTWT----------------------- 282
M++ Y++N+ +A F + P V T
Sbjct: 221 AMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKT 280
Query: 283 ----------AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
A++ Y + G +++AR +F+ +P + + W+ +I+ Y Q+ + + A E+F
Sbjct: 281 LCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMF 340
Query: 333 EAM-----------------TCKNVASW----------------------NTMITGYAQS 353
M C NVA N ++ YA+
Sbjct: 341 LRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKC 400
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
+ ++ +F + + +SW II GY QSG++ED+L +F EM+ + F+SVL
Sbjct: 401 RNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVL 460
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
CAN AS++ Q+H + K F V N+L+ Y KCG + +A FE I+ DV+
Sbjct: 461 RACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVV 520
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWN +I+GYA HG DAL LF M KP+D+T V +LS C TGLV +G F SM
Sbjct: 521 SWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSM 580
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
D+ + P+ HYTC+V LLGRAGRL++A + ++P P W ALL +C ++ L
Sbjct: 581 TMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVAL 640
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
+ +AE + E+EP++ YVLLSN+YAA+G V+ +R MR+ GVKK G SW+E++
Sbjct: 641 GKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKG 700
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+VH FSVG HP+ I A LE L K ++G+V +VLHDV EEEK ML HSE+
Sbjct: 701 EVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSER 760
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+AYG+ P G PIR+MKNLR C DCH K ISKIV R I++RD NRFHHF G CS
Sbjct: 761 LALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICS 820
Query: 774 CGDYW 778
CGDYW
Sbjct: 821 CGDYW 825
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 167/382 (43%), Gaps = 59/382 (15%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----------RDLV 124
G A VF+ + + +V++ AM+S Y N + A F +M ++
Sbjct: 199 GAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVL 258
Query: 125 SWNVMISGYVRNKSLSA-----------------------------ARNLFEMMPKRDVV 155
V +S V K + AR +FE++P DV+
Sbjct: 259 KAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVI 318
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA----CML 207
W+ ++S YAQ+ + A +F RM+ NE S +G+L A ++ ++
Sbjct: 319 LWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLV 378
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ E+ N+LM + K + + ++ IF + +EVSWNT+I GY Q+ + +A
Sbjct: 379 IKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDAL 438
Query: 268 RLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGY 319
+F+E V T+++++ + I + + +T+ N++I Y
Sbjct: 439 SVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTY 498
Query: 320 VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWA 375
+ + A ++FE++ +V SWN +I+GYA G T A LF+RM + D +++
Sbjct: 499 AKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFV 558
Query: 376 AIIAGYAQSGYSEDSLRLFIEM 397
A+++ +G L LF M
Sbjct: 559 ALLSVCGSTGLVNQGLSLFNSM 580
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 20/265 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ----LDPARQVF 115
D+ W+ I+ + ++ + A +F M R S V +SG L LD +Q+
Sbjct: 316 DVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIH 375
Query: 116 DQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + + +L N ++ Y + +++ + +F + + VSWNT++ GY Q+G+A+
Sbjct: 376 NLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAE 435
Query: 172 AARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEAC----MLFESKANWEVVSWNSLM 223
A +F M + +++++ +L A I+ ++ +S N + + NSL+
Sbjct: 436 DALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLI 495
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----F 279
+ K + DA +F+ + D VSWN +I+GYA + +A LF D
Sbjct: 496 DTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDV 555
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAM 304
T+ A++S G V++ +F++M
Sbjct: 556 TFVALLSVCGSTGLVNQGLSLFNSM 580
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 119/263 (45%), Gaps = 23/263 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
WN I + ++G + AL VF M + V++++++ + Q+ +
Sbjct: 421 WNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIE 480
Query: 120 Q----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ D + N +I Y + + A +FE + + DVVSWN ++SGYA +G A A
Sbjct: 481 KSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALE 540
Query: 176 IFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES-----KANWEVVSWNSLMGGF 226
+F+RM + N++++ LL+ G + + LF S + + + ++
Sbjct: 541 LFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLL 600
Query: 227 VKQKRLGDA-KWIFDRMPVRDEVSWNTMITGYAQNNYLA----EAQRLFEEAPVKDVFTW 281
+ RL DA K+I D + W +++ + +A A+++ E P +D T+
Sbjct: 601 GRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEP-QDETTY 659
Query: 282 TAMVSGYVQNGKVDEARMIFDAM 304
+ + Y G +D+ ++ +M
Sbjct: 660 VLLSNMYAAAGILDQVALLRKSM 682
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/712 (36%), Positives = 408/712 (57%), Gaps = 26/712 (3%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
+F+++ +S+++ + +L +LD + + ++ +IS + SL A
Sbjct: 26 LFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKL----------VISSCALSSSLDYA 75
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQN 198
++F ++PK + N L +++ + +++RM L + S+ LL A +
Sbjct: 76 LSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRV 135
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQ----KRLGDAKWIFDRMPVRDEVSWNTMI 254
+ E + A S + G V+ R+ +A+ +FD+M RD V+W+ MI
Sbjct: 136 KSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMI 195
Query: 255 TGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
GY Q+ +A LFEE D + ++S + G + +MI D + E N V
Sbjct: 196 DGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIV 255
Query: 311 S----WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
+A++ Y MD+A LFE MT KN+ + M+TGY++ G+I +AR++F++M
Sbjct: 256 VDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQM 315
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ D + W+A+I+GYA+S +++L LF EM+ G + ++ SV++ CA+L +L+ K
Sbjct: 316 VKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAK 375
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+H + K GF + NAL+ MY KCGS+E A F+++ K+VISW MI+ +A HG
Sbjct: 376 WIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHG 435
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
AL F M+ I+P+ IT VG+L ACSH GLVE+G + FYSM ++ + P HY
Sbjct: 436 DAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHY 495
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
CMVDL GRA L EA L++ MP P+ WG+L+ ACR++G+ EL E AA+ + E++P
Sbjct: 496 GCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDP 555
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
++ G +V LSN+YA + RW DV +VR M+ +G+ K G S E+ N++H F V D H
Sbjct: 556 DHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHK 615
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
D IY L E+ KLK G+ +T +L D+ EEEK+ ++ +HSEKLA+ YG++ G
Sbjct: 616 HADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTG 675
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IR++KNLRVCEDCH IK SK+ R I++RD RFHH+ G CSC DYW
Sbjct: 676 SCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 170/372 (45%), Gaps = 61/372 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP-------------------RRSSVSYNAMIS 100
D+ W++ I + ++G + AL +F M R ++SY MI
Sbjct: 187 DVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIH 246
Query: 101 GYLLN--------------------GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
+++ G +D A +F++M ++LV+ M++GY + +
Sbjct: 247 DFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIE 306
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
AR++F M K+D+V W+ M+SGYA++ A +F+ M ++ ++++ ++ A
Sbjct: 307 NARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACA 366
Query: 197 QNGRIEEA--CMLFESKANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
G +++A LF K + + N+L+ + K L A+ IFD+MP ++ +SW
Sbjct: 367 HLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTC 426
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
MI+ +A + A R F + +++ T+ ++ G V+E R IF +M ++
Sbjct: 427 MISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEH 486
Query: 309 TVS-----WNAMIAGYVQTKRMDMARELFEAMT-CKNVASWNTMITGYAQSGEIT----H 358
++ + M+ + + + A EL EAM NV W +++ GEI
Sbjct: 487 NITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFA 546
Query: 359 ARNLFDRMPQHD 370
A+ L + P HD
Sbjct: 547 AKRLLELDPDHD 558
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 270/743 (36%), Positives = 409/743 (55%), Gaps = 63/743 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
++++ YL G L+ A VF ++ + +V W V+IS YV +AA LF + +
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML 207
D + + ++LS + + A R I +E EI + L++ Y + G + +A L
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANAL 185
Query: 208 F-ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQN 260
F + + +VV WN+++ + +A IF RM P D V++ ++ + +
Sbjct: 186 FGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPP--DLVTFVSVFKACSSS 243
Query: 261 NYLAEAQR------LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
L +Q L E DV TA+V+ Y + G++D AR F MPE+N VSW +
Sbjct: 244 PSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTS 303
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----- 369
MIA + Q + +A E F AM + V + + + E L + + Q
Sbjct: 304 MIAAFTQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQEIGVVT 362
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIE---------------------------MKRYGE 402
D ++ YA+ ED++R+F K +G
Sbjct: 363 DVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGA 422
Query: 403 RLNR--SP----FTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCG 455
+ R SP + + L CA+LA+L G+Q+H + + +GNA++ MY +CG
Sbjct: 423 AIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCG 482
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
S+ +A AF+ + +D ISWN M++ A+HG +D LF +M G + I + +LS
Sbjct: 483 SLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLS 542
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GLV+ G E+F +M D+GV+P ++HY CMVDLLGR GRL +A +++ MP PDA
Sbjct: 543 ACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDA 602
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
ATW AL+GACR+YG TE AAE + E+ ++ YV L N+Y+A+GRW D + VR M
Sbjct: 603 ATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIM 662
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
D G++K+ G S +E+++KVH F V D HP+ + IYA LE + +++ G+ T VL
Sbjct: 663 ADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVL 722
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HDV EE+KE +LR+HSEKLA+A+G++S P G +RV+KNLRVC DCHNA K ISK+ GR
Sbjct: 723 HDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGRE 782
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I++RD RFHHF G+CSCGDYW
Sbjct: 783 IVVRDVRRFHHFKDGACSCGDYW 805
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 142/334 (42%), Gaps = 60/334 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPR-----------------------RSS---- 92
D+ WN IT + +NG AL +F M + R+S
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKG 253
Query: 93 --------------VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
V A+++ Y G++D AR+ F +MP+R+ VSW MI+ + +
Sbjct: 254 FHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGH 313
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA-ARRIFDRMLEKNEISWN-----GLL 192
L A M+ + V + +T+ + A G D R+ + + ++ + + L+
Sbjct: 314 LLAVETFHAMLLEGVVPTRSTLFA--ALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLV 371
Query: 193 AAYVQNGRIEEACMLFESK--ANWEVVSWNSLMGGFV--KQKRLGDAKW--IFDRMPVRD 246
AY + E+A +F ++ W+ +++ + + +R W +R D
Sbjct: 372 MAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPD 431
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIF 301
+ + T + A L+E +++ +DV A+VS Y Q G + +AR F
Sbjct: 432 RILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAF 491
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
D MP ++ +SWNAM++ Q R++ +LF AM
Sbjct: 492 DGMPARDEISWNAMLSASAQHGRVEDCCDLFRAM 525
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
++ ++L+ MY +CGS+E A F +I K ++ W +I+ Y G A+ LF +
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE 122
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
GI D I V +LSACS + G + + G+ + +V + GR G L +
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAG-RLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRD 181
Query: 562 AQNLMKNMPFEPDAATWGALLGA 584
A L ++ D W A++ A
Sbjct: 182 ANALFGHLERHLDVVLWNAMITA 204
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/643 (38%), Positives = 357/643 (55%), Gaps = 80/643 (12%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---- 270
E ++ +L + K +R DA+ +FDRMPVRD V+WN ++ GYA+N A +
Sbjct: 93 EALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQ 152
Query: 271 -EEAPVKDVFTW-----------------------------------TAMVSGYVQNGKV 294
EE D T TA++ Y + G +
Sbjct: 153 EEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDI 212
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT------------------ 336
AR++FD MP KN+VSWNAMI GY Q A LF M
Sbjct: 213 RAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQAC 272
Query: 337 ----C-----------------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
C NV+ N +IT Y++ + A ++FD + + +SW
Sbjct: 273 GELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWN 332
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+I G AQ+G SED++RLF M+ + + SV+ A+++ + +HG +++
Sbjct: 333 AMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRL 392
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
+ +V AL+ MY KCG V A F ++ VI+WN MI GY HGFGK A+ LF
Sbjct: 393 HLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELF 452
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
E MK++GI P++ T + +LSACSH GLV++G EYF SM DYG+ P +HY MVDLLGR
Sbjct: 453 EEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGR 512
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
AG+LDEA ++ MP +P + +GA+LGAC+L+ ELAE++A+ IFE+ P+ +VLL
Sbjct: 513 AGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLL 572
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
+N+YA + W DV++VR M G++K G+S ++++N++HTF G T H + IY+ L
Sbjct: 573 ANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRL 632
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
+L ++K G+V T + HDV ++ K +L HSEKLA+A+G++ G I++ KNL
Sbjct: 633 AKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNL 691
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RVC DCHNA K IS + GR II+RD RFHHF G CSCGDYW
Sbjct: 692 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 199/485 (41%), Gaps = 93/485 (19%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMM 149
++ +++ G L R V Q+ R + ++ + + Y + + + AR +F+ M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-----NEISWNGLL----AAYVQNGR 200
P RD V+WN +++GYA+NG A A + RM E+ + I+ +L A
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
E S V +++ + K + A+ +FD MP ++ VSWN MI GYAQN
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 261 NYLAEAQRLF-----EEAPVKDVFTWT--------------------------------- 282
EA LF E V DV
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 283 -AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV- 340
A+++ Y + +VD A +FD + + VSWNAMI G Q + A LF M +NV
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 341 ---------------------ASW-----------------NTMITGYAQSGEITHARNL 362
A W +I YA+ G + AR L
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F+ + I+W A+I GY G+ + ++ LF EMK G N + F SVLS C++ +
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480
Query: 423 ELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIA 480
+ G++ + + G E G ++ + + G ++EA+ +++ +D + + M+
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540
Query: 481 GYARH 485
H
Sbjct: 541 ACKLH 545
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L F+ M G FTS+L CA L G+ +H QL G ++ AL
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL-MLFESMKTVGIKPDDI 508
MY KC +A F+ + +D ++WN ++AGYAR+G + A+ M+ + G +PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 509 TMVGIL 514
T+V +L
Sbjct: 163 TLVSVL 168
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 53/275 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ N IT + + D A HVF+ + RR+ VS+NAMI G NG + A ++F +
Sbjct: 294 DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTR 353
Query: 118 MP---------------------------------------QRDLVSWNVMISGYVRNKS 138
M +D+ +I Y +
Sbjct: 354 MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
++ AR LF +R V++WN M+ GY +G+ AA +F+ M + NE ++ +L+A
Sbjct: 414 VNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473
Query: 195 YVQNGRIEEACMLFES-KANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVS 249
G ++E F S K ++ + G V + +L +A +MP+ +S
Sbjct: 474 CSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLS 533
Query: 250 WNTMITGYA---QNNYLAE--AQRLFEEAPVKDVF 279
+ G +N LAE AQ++FE P + V+
Sbjct: 534 VYGAMLGACKLHKNVELAEESAQKIFELGPQEGVY 568
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 271/766 (35%), Positives = 412/766 (53%), Gaps = 79/766 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI WN I ++ +GC L +F M V+ + ++N + + M
Sbjct: 188 DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMV 247
Query: 120 QRDLVS--------WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
++ WN +++ Y + +L A LFE + ++DVVSWN M++ Q G +
Sbjct: 248 HGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGE 307
Query: 172 AARRIFDRML------EKNEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWN 220
A +F RML + N +++ LL+A ++ GR E +F + N
Sbjct: 308 NALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGR-EIHAHIFRLSLEVDTSITN 366
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---- 276
SL+ + K + +G A+ IF+R+ +RD +SWN+M+ GY QN +F+ +
Sbjct: 367 SLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEP 426
Query: 277 DVFTWTAMVSG---------YVQNGKVDEARMIFDAMPEKNTVSW-NAMIAGYVQTKRMD 326
D + T + + Y + GK ++ P ++S NA++ Y + R+
Sbjct: 427 DSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIA 486
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
A ++F+ M ++ SWN M+ GY+++ +
Sbjct: 487 DAEKIFKGMKNRDSYSWNAMMDGYSRNAKF------------------------------ 516
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC----- 441
ED L +F+++ + G L+ + +L++C L SL+LGKQ H + K+ C
Sbjct: 517 -EDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDS 575
Query: 442 --FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
+ NAL+ MY KCGS+++A F ++ KDV SW MI G A HG +AL LFE MK
Sbjct: 576 LLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMK 635
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
T GIKP+ +T + +L AC+H GLV++G+ YF SM DYG+ P+ +HY CM+DL GR+G+
Sbjct: 636 TDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQF 695
Query: 560 DEAQNLMK-----NMPFEPDAAT-WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
D A++L++ P+ D W LLGAC + +L +AA I E+EPE+ Y+
Sbjct: 696 DRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYI 755
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LL+NLYA+SG W D KVR MRD+G++K G SW++ N+ H F GD HP++ IY
Sbjct: 756 LLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYE 815
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR-PIRVM 732
L +L + ++ G+V T+LVLHDV E EKE +L HSEKLAV++G+L+ G IRVM
Sbjct: 816 KLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVM 875
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLRVCEDCH+ +K S + R I+LRD+ RFH F GSCSCGDYW
Sbjct: 876 KNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 140/611 (22%), Positives = 270/611 (44%), Gaps = 75/611 (12%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ +H+RN + H F+S + + + + +L A+Q+FD P RD++SW+
Sbjct: 31 LHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWS 90
Query: 128 VMISGYVRNKSLSAARNLFEMM------PK--------------------RDVVSWNTM- 160
+I+ Y R + + A LF+ M P R + W+
Sbjct: 91 ALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRT 150
Query: 161 ------------LSGYAQNGYADAARRIFDR--MLEKNEISWNGLLAAYVQNGRIEEACM 206
++ Y++ G + A+R+FD +L + + WN ++AAY+ +G E
Sbjct: 151 GFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLR 210
Query: 207 LFESKANWEVVSWNSLMGGFVKQK--RLGDAKW---IFDRM---PVRDEVSWNTMITGYA 258
LF + VV+ L V G+ K+ + R+ + WN+++T Y
Sbjct: 211 LFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLWNSLVTFYG 270
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSW 312
+ L A +LFE KDV +W AM++ Q G+ + A +F M + N V++
Sbjct: 271 KCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTF 330
Query: 313 NAMIAGYVQTKRMDMARE----LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
++++ + RE +F + + N++IT Y++ E+ AR +F+R+
Sbjct: 331 LSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLL 390
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC----ANLASLEL 424
D ISW +++AGY Q+ +F M G + T + + + L
Sbjct: 391 RDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRR 450
Query: 425 GKQLHGQLVKVGFEAGC--FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
GK++HG +++ G V NA+L MY K + +A F+ + ++D SWN M+ GY
Sbjct: 451 GKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGY 510
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV--I 540
+R+ +D LM+F + G D +++ +L++C ++ G ++ + + +
Sbjct: 511 SRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDC 570
Query: 541 PNSKHY----TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
P+ ++ + + G + +A + M D +W A++ C +G LA +
Sbjct: 571 PHQDSLLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGCAHHG---LAVE 626
Query: 597 AAEVIFEMEPE 607
A ++ M+ +
Sbjct: 627 ALQLFERMKTD 637
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 235/533 (44%), Gaps = 98/533 (18%)
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
K+ ++ L ++++N ++E F S+ + + + + + +RL A+ +FD
Sbjct: 22 KSNVTSFRFLHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNF 81
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------------------------APVK 276
P RD +SW+ +I Y++ A+A LF++ +
Sbjct: 82 PNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCR 141
Query: 277 DVFTWT-------------AMVSGYVQNGKVDEARMIFD--AMPEKNTVSWNAMIAGYVQ 321
+ W+ A ++ Y + G +++A+ +FD ++ + + WN++IA Y+
Sbjct: 142 QLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIF 201
Query: 322 TKRMDMARELFEAMTCKNVAS--------------------------------------- 342
LF M V +
Sbjct: 202 HGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNL 261
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN+++T Y + G + HA LF+R+ + D +SW A+IA Q G E++L LF M +
Sbjct: 262 WNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEP 321
Query: 403 RL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
+ NR F S+LS + L++L G+++H + ++ E + N+L+ Y KC V +A
Sbjct: 322 PVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKA 381
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH- 519
FE ++ +D+ISWN+M+AGY ++ +F+ M GI+PD ++ I +A S
Sbjct: 382 REIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRD 441
Query: 520 -TGLV--EKGTE-YFYSMNRDYGVIPNSKHYT---CMVDLLGRAGRLDEAQNLMKNMPFE 572
+GL+ +G E + Y + R + P + ++ + + R+ +A+ + K M
Sbjct: 442 SSGLIYFRRGKEIHGYILRR---ITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMK-N 497
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGR 624
D+ +W A++ Y + E + ++ + + +V LS L + GR
Sbjct: 498 RDSYSWNAMMDG---YSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGR 547
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 275/828 (33%), Positives = 416/828 (50%), Gaps = 149/828 (17%)
Query: 93 VSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
+ ++ ++G L+N ++ AR +FD+MP RD+V WNVM+ YV + LF
Sbjct: 153 LQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFS 212
Query: 148 MMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEK---------------NEISW 188
+ D VS T+L G + + +F+R LE+ + W
Sbjct: 213 AFHRSGLRPDCVSVRTILMGVGK-------KTVFERELEQVRAYATKLFVCDDDSDVTVW 265
Query: 189 NGLLAAYVQNGRIEEACMLFES-------------------------------------K 211
N L++Y+Q G EA F +
Sbjct: 266 NKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR 325
Query: 212 ANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
W+ V NS + +VK + A+ +F +M D +SWNT+I+G A++ + RL
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRL 385
Query: 270 F-------------------------EEA---------------PVKDVFTWTAMVSGYV 289
F EE+ V D F TA++ Y
Sbjct: 386 FIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYS 445
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----------TCKN 339
+ GK++EA ++F + SWNAM+ G+ + A LF M T N
Sbjct: 446 KGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFAN 505
Query: 340 VAS-----------------------------WNTMITGYAQSGEITHARNLFDRMPQHD 370
A + ++ Y + GE+ AR +F+++P D
Sbjct: 506 AAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPD 565
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
++W +I+G ++G E +L + +M+ G + + F +++ C+ L +LE GKQ+H
Sbjct: 566 DVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHA 625
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
++K+ FV +L+ MY KCG++E+AY F + + V WN MI G A+HG ++
Sbjct: 626 NIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEE 685
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
AL F MK+ G+ PD +T +G+LSACSH+GL + F SM + YGV P +HY+C+V
Sbjct: 686 ALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLV 745
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
D L RAG + EA+ ++ +MPFE A + LL ACR+ G E E+ AE +F M+P ++
Sbjct: 746 DALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSA 805
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YVLLSN+YAA+ +W + R M+ VKK G+SW++++NKVH F GD H E D
Sbjct: 806 AYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDL 865
Query: 671 IYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIR 730
IY +E + ++K++G+V T+ L D+ EE+KE L YHSEKLA+AYG++ P +R
Sbjct: 866 IYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLR 925
Query: 731 VMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
V+KNLRVC DCHNAIK+IS + R I+LRD NRFHHF G CSCGDYW
Sbjct: 926 VIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 146/541 (26%), Positives = 247/541 (45%), Gaps = 49/541 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQ--RDLVSWNVMISGYVRNKSL------SAARNLFE 147
N +I+ Y G L AR++FD PQ RDLV++N +++ Y L A ++F
Sbjct: 52 NNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFR 111
Query: 148 MMPKRDVVSWNTMLSGYAQNGY---ADAARRIFDRMLEKNEISWNGLLAA-----YVQNG 199
++ + +++ LS + + +A K + W+ +A Y +
Sbjct: 112 LLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQ 171
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVR-DEVSWNTMIT 255
RI EA +LF+ +VV WN +M +V+ + +F R +R D VS T++
Sbjct: 172 RIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILM 231
Query: 256 GYAQNNYL--------AEAQRLFEEAPVKDVFTWTAMVSGYVQNGK----VDEARMIFDA 303
G + A A +LF DV W +S Y+Q G+ VD R + +
Sbjct: 232 GVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKS 291
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHA 359
+++++ +++ +++ +++ A+ + V+ N+ I Y ++G + +A
Sbjct: 292 RVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYA 351
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R +F +M + D ISW +I+G A+SG E SLRLFI++ R G ++ TSVL C++L
Sbjct: 352 RRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSL 411
Query: 420 -ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
S +G+Q+H +K G FV AL+ +Y K G +EEA F D+ SWN M
Sbjct: 412 EESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAM 471
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ G+ ++AL LF M G K D IT A +++G +
Sbjct: 472 MHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV------ 525
Query: 539 VIPNSKHYTCMV-----DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
VI HY V D+ + G + A+ + +P PD W ++ C G+ E
Sbjct: 526 VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQ 584
Query: 594 A 594
A
Sbjct: 585 A 585
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 229/498 (45%), Gaps = 59/498 (11%)
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFD--RMLEKNEISWNGLLAAYVQNGRIEEACML 207
P R V N +++ YA+ G +AR++FD +++ +++N +LAAY G + +
Sbjct: 46 PDRYVT--NNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKT 103
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
E+ + ++ + ++ + L +F + S + + GYA L
Sbjct: 104 HEAFHIFRLLRQSVML---TTRHTLSP---LFKLCLLYGSPSASEALQGYAVKIGLQW-- 155
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
DVF A+V+ Y + ++ EAR++FD MP ++ V WN M+ YV+ D
Sbjct: 156 ---------DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDE 206
Query: 328 ARELFEAM----TCKNVASWNTMITGYAQSGEI--------THARNLFDRMPQHDCISWA 375
LF A + S T++ G + +A LF D W
Sbjct: 207 VLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWN 266
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++ Y Q+G +++ F +M + + + +LS A+L LELGKQ+HG +V+
Sbjct: 267 KTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRF 326
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G++ V N+ + MY K GSV A F ++ + D+ISWNT+I+G AR G + +L LF
Sbjct: 327 GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLF 386
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY-------GVIPNSKHYTC 548
+ G+ PD T+ +L ACS E Y + R G++ +S T
Sbjct: 387 IDLLRSGLLPDQFTITSVLRACS-------SLEESYCVGRQVHTCALKAGIVLDSFVSTA 439
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG----------ACRLYGKT-ELAEKA 597
++D+ + G+++EA+ L N D A+W A++ A RL+ E EKA
Sbjct: 440 LIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKA 498
Query: 598 AEVIFEMEPENAGMYVLL 615
++ F + AG V L
Sbjct: 499 DQITFANAAKAAGCLVRL 516
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 10/182 (5%)
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI--V 468
S+L + L LGK+ H +V G +V N L+ MY KCGS+ A F+
Sbjct: 18 SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77
Query: 469 DKDVISWNTMIAGYARHGFGKD------ALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
D+D++++N ++A YA G D A +F ++ + T+ + C G
Sbjct: 78 DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG- 136
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+E G+ + +V++ + R+ EA+ L MP D W ++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DVVLWNVMM 195
Query: 583 GA 584
A
Sbjct: 196 KA 197
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 268/768 (34%), Positives = 413/768 (53%), Gaps = 61/768 (7%)
Query: 23 INRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALH 82
I L P P + K L+ H +S ++ +TTH N D
Sbjct: 28 IRPLDPPPFRFPASTLKFLETHYSS-----------------SLNLTTHFNNNKDDC--- 67
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS---- 138
N + Y ++I + L+ Q++ ++ L +I+ V S
Sbjct: 68 --NESTFKPDKFYASLIDDSIHKTHLN---QIYAKLLVTGLQYGGFLIAKLVNKASNIGE 122
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+S AR LF+ P DV WN ++ Y+++G+ A ++ RM
Sbjct: 123 VSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARM------------------ 164
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
+ AC+ + + V+ S + +R+ IF D N ++ YA
Sbjct: 165 ---QVACVSPDGFSFPCVLKACSALPALEMGRRVHGQ--IFRHGFESDVFVQNGLVALYA 219
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIA 317
+ + A +F + + +WT+++SGY QNG+ EA IF M + N W A+++
Sbjct: 220 KCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVS 279
Query: 318 ---GYVQTKRMDMARELFEAMTCKNV-ASWNTMITG---YAQSGEITHARNLFDRMPQHD 370
Y + ++ + + + + ++ +I+ YA+ G + AR F+++
Sbjct: 280 VLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPS 339
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
I W A+I+GY ++GY+E+++ LF MK R + TS ++ CA + SLEL + +
Sbjct: 340 LIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDE 399
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+ F V +L+ Y KCGSV+ A F+ I DKDV+ W+ M+ GY HG G++
Sbjct: 400 YISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRE 459
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
+++LF +M+ G+ P+D+T VG+L+AC ++GLVE+G + F+ M RDYG+ P +HY C+V
Sbjct: 460 SIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVV 518
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLLGRAG LD A N + NMP EP + WGALL AC+++ L E AAE +F ++P N G
Sbjct: 519 DLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTG 578
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YV LSNLYA+S W V+KVR+ MR++G+ K GYS +E+ K+ F GD HP
Sbjct: 579 HYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKE 638
Query: 671 IYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIR 730
I+ +E+LE +LK+ GFV T+ VLHD+ EE E L HSE+LA+AYG++S P G +R
Sbjct: 639 IFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLR 698
Query: 731 VMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ KNLR C++CH AIK ISK+V R I++RD RFHHF G+CSCGDYW
Sbjct: 699 ITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/616 (40%), Positives = 381/616 (61%), Gaps = 24/616 (3%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I Y LD AR++FD+MPQR+ +WN +IS ++ L A LF MP+ D
Sbjct: 54 NRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQC 113
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQ----NGRIEEACML 207
SWN+M+SG+AQ+ + + F +M + NE S+ L+A N + ++
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S+ + +V ++L+ + K + A+ +F M R+ V+WN++IT Y QN +EA
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 268 RLF----EEAPVKDVFTWTAMVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
+F + D T ++VS ++ G AR++ + V NA++
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDM 293
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + +++ AR +F+ M+ +NV S +M++GYA++ + AR +F +M Q + +SW A+I
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALI 353
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
AGY Q+G +E++LRLF +KR F ++LS CANLA L LG+Q H ++K GFE
Sbjct: 354 AGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE 413
Query: 439 ------AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
+ FVGN+L+ MY KCGS+E+ FE++ ++D +SWN +I GYA++G+G +AL
Sbjct: 414 FQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEAL 473
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+F M G KPD +TM+G+L ACSH GLVE+G YF+SM ++G+IP HYTCMVDL
Sbjct: 474 QIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDL 532
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG L+EA+NL++ MP PDA WG+LL AC+++G E+ + AAE + E++P N+G Y
Sbjct: 533 LGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPY 592
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSN+YA GRWGDV +VR MR +GV K G SW+EV+++VH F V D HP + +IY
Sbjct: 593 VLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIY 652
Query: 673 AYLEELEFKLKQDGFV 688
+ L+ L ++K+ G++
Sbjct: 653 SVLKMLTEQMKRVGYI 668
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 233/522 (44%), Gaps = 106/522 (20%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + C D A +F+ MP+R++ ++N++IS +G LD A ++F MP+ D
Sbjct: 54 NRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQC 113
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSG----------------- 163
SWN M+SG+ ++ + F M + D + S+ + LS
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173
Query: 164 ------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
Y++ G A +F M+E+N ++WN L+ Y QNG EA
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 206 MLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDE-VSWNTMITG 256
+F +S + V+ S++ L + I R+ RD+ V N ++
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDM 293
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ + + EA+R+F+ +++V + T+MVSGY + V AR +F M ++N VSWNA+I
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALI 353
Query: 317 AGYVQTKRMDMARELFEAM-----------------TCKNVASW---------------- 343
AGY Q + A LF + C N+A
Sbjct: 354 AGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE 413
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
N++I Y + G I +F++M + DC+SW AII GYAQ+GY ++L
Sbjct: 414 FQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEAL 473
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL------HGQLVKVGFEAGCFVGN 445
++F +M GE+ + VL C++ +E G+ HG L+ + C V
Sbjct: 474 QIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHG-LIPLKDHYTCMVD- 531
Query: 446 ALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+ + G + EA + E + V+ D + W +++A HG
Sbjct: 532 ----LLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 569
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 208/427 (48%), Gaps = 58/427 (13%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ ++ + E+ N L+ + K L DA+ +FDRMP R+ +WN++I+ ++ +L EA
Sbjct: 41 ILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEA 100
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQT 322
RLF P D +W +MVSG+ Q+ + +E+ F M + N S+ + ++
Sbjct: 101 ARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGL 160
Query: 323 KRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
++M ++ ++ +V + +I Y++ G + A +F M + + ++W ++I
Sbjct: 161 MDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLI 220
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-F 437
Y Q+G + ++L +F+ M G + SV+S CA+L +L+ G Q+H ++VK F
Sbjct: 221 TCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKF 280
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFE-------------------------------E 466
+GNAL+ MY KC V EA F+ +
Sbjct: 281 RDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSK 340
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC--------- 517
+ ++V+SWN +IAGY ++G ++AL LF +K I P T +LSAC
Sbjct: 341 MTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLG 400
Query: 518 --SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
+HT ++++G E+ D + NS ++D+ + G +++ + + M E D
Sbjct: 401 RQAHTHVLKQGFEFQSGAESDI-FVGNS-----LIDMYMKCGSIEDGSRVFEKMK-ERDC 453
Query: 576 ATWGALL 582
+W A++
Sbjct: 454 VSWNAII 460
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 168/405 (41%), Gaps = 94/405 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ + I + + G A VF+ M R+ V++N++I+ Y NG A +VF +M
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 119 -----PQR----------------------------------DLVSWNVMISGYVRNKSL 139
P DLV N ++ Y + +
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
+ AR +F+ M R+VVS +M+SGYA+ AAR +F +M ++N +SWN L+A Y QNG
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360
Query: 200 RIEEACML---------------------------------------------FESKANW 214
EEA L F+S A
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAES 420
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
++ NSL+ ++K + D +F++M RD VSWN +I GYAQN Y AEA ++F +
Sbjct: 421 DIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKML 480
Query: 275 V----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGYVQTKRMD 326
V D T ++ G V+E R F +M E + + M+ + ++
Sbjct: 481 VCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLN 540
Query: 327 MARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
A+ L EAM + W +++ G I ++ +++ + D
Sbjct: 541 EAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEID 585
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 33/333 (9%)
Query: 38 KKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNA 97
K+ L+ H NK + D+ N + + + + A VF+ M R+ VS +
Sbjct: 265 KEGLQIHARVVKTNKFRD----DLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETS 320
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV--- 154
M+SGY + AR +F +M QR++VSWN +I+GY +N A LF ++ + +
Sbjct: 321 MVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPT 380
Query: 155 -VSWNTMLSGYAQNGYADAARRIFDRML----------EKNEISWNGLLAAYVQNGRIEE 203
++ +LS A R+ +L E + N L+ Y++ G IE+
Sbjct: 381 HYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIED 440
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQ 259
+FE + VSWN+++ G+ + +A IF +M V D V+ ++ +
Sbjct: 441 GSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSH 500
Query: 260 NNYLAEAQRLF---EE---APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSW 312
+ E + F EE P+KD +T MV + G ++EA+ + +AMP + V W
Sbjct: 501 AGLVEEGRHYFFSMEEHGLIPLKD--HYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVW 558
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+++A ++M + E + + WN+
Sbjct: 559 GSLLAACKVHGNIEMGKHAAEKLL--EIDPWNS 589
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 15/242 (6%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N SPF +L +C S + +H +++ F F+ N L+ +Y KC +++A F
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + ++ +WN++I+ + GF +A LF SM +PD + ++S + E
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGFAQHDRFE 129
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD-----EAQNLMKNMPFEPDAATWG 579
+ EYF M+R+ ++ Y+ L AG +D + L+ + D
Sbjct: 130 ESLEYFVKMHREDFLL---NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGS 186
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
AL+ +Y K A EV M N + L Y +G + +V ++M D G
Sbjct: 187 ALID---MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG 243
Query: 640 VK 641
++
Sbjct: 244 LE 245
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/705 (35%), Positives = 404/705 (57%), Gaps = 55/705 (7%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
++S Y N + A + +++P+ +V S++T++ +++ A F +ML + +
Sbjct: 54 LLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPD 113
Query: 189 NGLLAAYVQN----GRIEEACML--FESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFD 240
N +L + V+ ++ A + S + ++ S+ +SL+ ++K ++ DA +FD
Sbjct: 114 NRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFD 173
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDE 296
RM D VSW+ ++ YA+ + EA+RLF E ++ +W M++G+ +G E
Sbjct: 174 RMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSE 233
Query: 297 ARMIFDAM------PEKNTVS-------------WNAMIAGYV-----------QTKRMD 326
A ++F M P+ T+S +I GYV + +D
Sbjct: 234 AVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALID 293
Query: 327 M---------ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF----DRMPQHDCIS 373
M ++F+ M +V S N I G +++G++ + LF D+ + + +S
Sbjct: 294 MYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVS 353
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W ++IA +Q+G ++L LF EM+ G + N +L C N+A+L GK H +
Sbjct: 354 WTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSL 413
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+ G +VG+AL+ MY KCG ++ + F+ I K+++ WN +IAGYA HG K+A+
Sbjct: 414 RRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAME 473
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
+F+ M+ G KPD I+ +LSACS +GL E+G+ YF SM+ YG+ +HY CMV LL
Sbjct: 474 IFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLL 533
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
RAG+L++A +++ MP PDA WGALL +CR++ L E AAE +FE+EP N G Y+
Sbjct: 534 SRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYI 593
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LLSN+YA+ G W +V++VR M+++G++K G SW+EV+NKVH GD HP+ +I
Sbjct: 594 LLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIE 653
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L++L ++K+ G+ VL DV E++KE +L HSEKLAV +G+L+ P G P++V+K
Sbjct: 654 KLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIK 713
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLR+C DCH IK IS R I +RD NRFHHF G+CSCGDYW
Sbjct: 714 NLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 167/386 (43%), Gaps = 67/386 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ W+ + + R GC D A +F+ M + + +S+N MI+G+ +G A +F
Sbjct: 179 DVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238
Query: 116 DQMPQR--------------------DLVSWNVMISGY------VRNKSLSAA------- 142
M R DLV ++I GY V +K +S+A
Sbjct: 239 LDMHLRGFEPDGTTISSVLPAVGDLEDLV-MGILIHGYVIKQGLVSDKCVSSALIDMYGK 297
Query: 143 -------RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF----DRMLEKNEISWNGL 191
+F+ M DV S N + G ++NG +++ R+F D+ +E N +SW +
Sbjct: 298 CSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSM 357
Query: 192 LAAYVQNGRIEEACMLFES------KANWEVVSWNSLMGGFVKQKRLGDAKWIFD--RMP 243
+A QNGR EA LF K N + G + G A F R
Sbjct: 358 IACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
D + +I YA+ + ++ F+ P K++ W A+++GY +GK EA IFD
Sbjct: 418 STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477
Query: 304 M----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSG 354
M + + +S+ +++ Q+ + F +M+ K V + M+T +++G
Sbjct: 478 MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537
Query: 355 EITHARNLFDRMPQH-DCISWAAIIA 379
++ A + RMP + D W A+++
Sbjct: 538 KLEQAYAMIRRMPVNPDACVWGALLS 563
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
ASL +Q H ++K G + LL Y +A + + + +V S++T+I
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
+++ AL F M T G+ PD+ + + AC+ + K + + G
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSAL-KPARQVHGIASVSGF 145
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+S + +V + + ++ +A + M FEPD +W AL+ A Y + ++A
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA---YARQGCVDEAKR 201
Query: 600 VIFEM 604
+ EM
Sbjct: 202 LFSEM 206
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 61/254 (24%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + I + + G ++ F+ +P ++ V +NA+I+GY ++G+ A ++FD M
Sbjct: 420 DVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLM- 478
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
QR SG K D++S+ +LS +Q+G + F+
Sbjct: 479 QR---------SG-----------------QKPDIISFTCVLSACSQSGLTEEGSYYFNS 512
Query: 180 MLEKNEISWNGLLAAYVQNGRIEE-ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
M K Y R+E ACM+ +L+ + +L A +
Sbjct: 513 MSSK-----------YGIEARVEHYACMV-------------TLLS---RAGKLEQAYAM 545
Query: 239 FDRMPVR-DEVSWNTMITGYAQNNYLA----EAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
RMPV D W +++ +N ++ A++LFE P + + + + Y G
Sbjct: 546 IRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEP-SNPGNYILLSNIYASKGM 604
Query: 294 VDEARMIFDAMPEK 307
+E + D M K
Sbjct: 605 WNEVNRVRDMMKNK 618
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/640 (36%), Positives = 374/640 (58%), Gaps = 53/640 (8%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
L+ AY++ GRI EA +F+ + +V +WN+++ G + R +A +F RM V + V+
Sbjct: 109 LVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRM-VGEGVAG 167
Query: 251 NTMITGYA-------QNNYLAEAQRLF--EEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
+T+ + LA ++ + K++F A++ Y + G ++EA+ +F
Sbjct: 168 DTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVF 227
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-------------------------- 335
M ++ V+WN++I+G Q + A ++F+ M
Sbjct: 228 HGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGR 287
Query: 336 --------------TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
++ + N ++ YA+ I A+ +FD MP D +SW +I GY
Sbjct: 288 SAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGY 347
Query: 382 AQSGYSEDSLRLFIEMKRY-GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Q+G + +++ + M+++ G + + F SVL ++L +L+ G ++H +K+G
Sbjct: 348 MQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVD 407
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+VG L+ +Y KCG + EA FE++ + WN +I+G HG G +AL LF M+
Sbjct: 408 VYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQ 467
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
GIKPD +T V +L+ACSH GLV++G +F M Y ++P +KHY CM D+LGRAG+LD
Sbjct: 468 EGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLD 527
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA N ++NMP +PD+A WGALLGACR++G E+ + A++ +FE++PEN G YVL+SN+YA
Sbjct: 528 EAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYA 587
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL--HPEKDRIYAYLEEL 678
G+W V +VR +R + ++K G+S +EV+ V+ F G+ HP+ + I A L L
Sbjct: 588 KVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSL 647
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K++ G+V VL DV ++EKEH+L HSE+LA+A+GI++ P+ P+ + KNLRVC
Sbjct: 648 LAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVC 707
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCHNA K+IS+I R II+RD+NRFHHF G CSCGD+W
Sbjct: 708 GDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 196/437 (44%), Gaps = 54/437 (12%)
Query: 243 PVR-DEVSWNTMITGYAQNNYLAE----AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
P R D ++ ++I N A+ A RL P VFT ++V Y++ G++ EA
Sbjct: 65 PFRPDGFTFPSLIRAAPSNASAAQLHACALRLGLVRP--SVFTSGSLVHAYLRFGRISEA 122
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS--------------- 342
+FD M E++ +WNAM++G + R A LF M + VA
Sbjct: 123 YKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLL 182
Query: 343 ------------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
N +I Y + G + A+ +F M D ++W +II
Sbjct: 183 GDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSII 242
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+G Q G + +L++F M+ G + S+ S A K LH +++ G++
Sbjct: 243 SGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD 302
Query: 439 AGCFV-GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ GNA++ MY K ++E A F+ + +D +SWNT+I GY ++G +A+ +
Sbjct: 303 VDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGH 362
Query: 498 M-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M K G+K T V +L A SH G +++G ++++ G+ + TC++DL +
Sbjct: 363 MQKHEGLKAIQGTFVSVLPAYSHLGALQQGMR-MHALSIKIGLNVDVYVGTCLIDLYAKC 421
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YVLL 615
G+L EA L + MP W A++ ++G +A + M+ E +V
Sbjct: 422 GKLAEAMLLFEKMP-RRSTGPWNAIISGLGVHGH---GAEALTLFSRMQQEGIKPDHVTF 477
Query: 616 SNLYAASGRWGDVSKVR 632
+L AA G V + R
Sbjct: 478 VSLLAACSHAGLVDQGR 494
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 163/391 (41%), Gaps = 92/391 (23%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-------- 119
+ ++R G A VF+ M R ++NAM+SG N + A +F +M
Sbjct: 110 VHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDT 169
Query: 120 -------------------------------QRDLVSWNVMISGYVRNKSLSAARNLFEM 148
++L N +I Y + L A+ +F
Sbjct: 170 VTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHG 229
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ--NGRIE 202
M RD+V+WN+++SG Q G AA ++F M + + ++ L +A Q +GR
Sbjct: 230 MECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSA 289
Query: 203 EACMLFESKANWEV---VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
++ + + W+V ++ N+++ + K + A+ +FD MPV+D VSWNT+ITGY Q
Sbjct: 290 KSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQ 349
Query: 260 NNYLAEAQRLF-----------------------------------EEAPVK-----DVF 279
N EA + +K DV+
Sbjct: 350 NGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVY 409
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
T ++ Y + GK+ EA ++F+ MP ++T WNA+I+G A LF M +
Sbjct: 410 VGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEG 469
Query: 340 V----ASWNTMITGYAQSGEITHARNLFDRM 366
+ ++ +++ + +G + R+ FD M
Sbjct: 470 IKPDHVTFVSLLAACSHAGLVDQGRSFFDVM 500
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 160/343 (46%), Gaps = 36/343 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN-----AMISGYLLNGQLDPARQV 114
D+ WN I+ + G +AL +F M R S VS + ++ S G A+ +
Sbjct: 234 DLVTWNSIISGCEQRGQTAAALKMFQGM-RGSGVSPDVLTLVSLASAIAQGGDGRSAKSL 292
Query: 115 FDQMPQR-----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ +R D+++ N ++ Y + ++ AA+ +F+ MP +D VSWNT+++GY QNG
Sbjct: 293 HCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGL 352
Query: 170 ADAARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWN 220
A+ A + M L+ + ++ +L AY G +++ + + N +V
Sbjct: 353 ANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGT 412
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK 276
L+ + K +L +A +F++MP R WN +I+G + + AEA LF +E
Sbjct: 413 CLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKP 472
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMAREL 331
D T+ ++++ G VD+ R FD M + + M + ++D A
Sbjct: 473 DHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNF 532
Query: 332 FEAMTCK-NVASWNTM-----ITGYAQSGEITHARNLFDRMPQ 368
+ M K + A W + I G + G++ ++NLF+ P+
Sbjct: 533 IQNMPIKPDSAVWGALLGACRIHGNVEMGKVA-SQNLFELDPE 574
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/577 (40%), Positives = 346/577 (59%), Gaps = 51/577 (8%)
Query: 250 WNTMITGYAQNNYLAEAQRLFE-------EAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+++++T + E QR+ E PV + T ++ Y + + +AR + D
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPV---YLRTRLIVLYNKCRCLGDARRVLD 69
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITG--------- 349
MPE+N VSW AMI+GY Q A LF M T N ++ T++T
Sbjct: 70 EMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 129
Query: 350 --------------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
YA++G+I AR +FD +P+ D +S AII+GYAQ
Sbjct: 130 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 189
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G E++L LF ++R G R N + SVL+ + LA+L+ G+Q+H +++ +
Sbjct: 190 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 249
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG- 502
N+L+ MY KCGS+ + F+ + ++ VISWN M+ GY++HG G++A+ LF+ MK
Sbjct: 250 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
+KPD +T + +LS CSH G+ ++G E FY M N+ G P +HY C+VDL GRAGR++E
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A +K MPFEP AA WG+LLGACR++ + E A + E+E ENAG YV+LSNLYA+
Sbjct: 370 AFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYAS 429
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
+GRW DV VR M+++ V K G SW+E+ +HTF D HP K+ ++A + EL K
Sbjct: 430 AGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIK 489
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
+K+ G+V VL+DV +E+KE +L+ HSEKLA+A+G++ P G P+R++KNLR+C DC
Sbjct: 490 IKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDC 549
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
HN K +S++ GR + LRD NRFHH GG+CSCGDYW
Sbjct: 550 HNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 23/291 (7%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKN 184
+I Y + + L AR + + MP+R+VVSW M+SGY+Q GYA A +F ML N
Sbjct: 51 LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPN 110
Query: 185 EISWNGLLAAYV-----QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
E ++ +L + Q GR + ++ ++ + +SL+ + K ++ +A+ +F
Sbjct: 111 EFTFATVLTSCTSSSGFQLGR-QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 169
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
D +P RD VS +I+GYAQ EA +RL E + T+ ++++ +D
Sbjct: 170 DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 229
Query: 296 EARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
R + + V N++I Y + + +R +F++M + V SWN M+ GY+
Sbjct: 230 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 289
Query: 352 QSGEITHARNLFDRMPQH-----DCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+ G A LF M + D +++ A+++G + G + L +F EM
Sbjct: 290 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEM 340
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 61/332 (18%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------P---------- 119
C A V + MP R+ VS+ AMISGY G A +F +M P
Sbjct: 60 CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 119
Query: 120 -----------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
+ + + ++ Y + + AR +F+ +P+RDVVS
Sbjct: 120 SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 179
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY-----VQNGRIEEACML 207
++SGYAQ G + A +F R+ + N +++ +L A + +GR + +L
Sbjct: 180 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 239
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+K + VV NSL+ + K L ++ IFD MP R +SWN M+ GY+++ EA
Sbjct: 240 -RAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 298
Query: 268 RLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMP------EKNTVSWNAMI 316
LF EE VK D T+ A++SG G D IF M E + ++
Sbjct: 299 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 358
Query: 317 AGYVQTKRMDMARELFEAMTCKNVAS-WNTMI 347
+ + R++ A E + M + A+ W +++
Sbjct: 359 DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 390
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 151/326 (46%), Gaps = 61/326 (18%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRL-- 269
VVSW +++ G+ ++ +A +F M +E ++ T++T ++ +++
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 270 --FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ + +F ++++ Y + GK+ EAR +FD +PE++ VS A+I+GY Q +
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195
Query: 328 ARELFEAMTCKNVAS---------------------------------------WNTMIT 348
A +LF + + + S N++I
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRS 407
Y++ G +T++R +FD MP+ ISW A++ GY++ G +++ LF MK + + +
Sbjct: 256 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 315
Query: 408 PFTSVLSTCANLASLELGKQLHGQLV--KVGFEA-----GCFVGNALLVMYCKCGSVEEA 460
F +VLS C++ + G ++ ++V K GFE GC V ++ + G VEEA
Sbjct: 316 TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVD-----LFGRAGRVEEA 370
Query: 461 YHAFEEI-VDKDVISWNTMIAGYARH 485
+ +++ + W +++ H
Sbjct: 371 FEFIKKMPFEPTAAIWGSLLGACRVH 396
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 64/321 (19%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMM-----P----------- 150
L AR+V D+MP+R++VSW MISGY + S A +LF EM+ P
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 151 ----------------------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+ + +++L YA+ G ARR+FD + E++ +S
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 180
Query: 189 NGLLAAYVQNGRIEEACMLFES------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+++ Y Q G EEA LF ++N+ V++ S++ L + + +
Sbjct: 181 TAIISGYAQLGLDEEALDLFRRLQREGMRSNY--VTYASVLTALSGLAALDHGRQVHSHV 238
Query: 243 PVRDEVSW-----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+R ++ + N++I Y++ L ++R+F+ P + V +W AM+ GY ++G EA
Sbjct: 239 -LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREA 297
Query: 298 RMIFDAMPEKN-----TVSWNAMIAGYVQTKRMDMARELFEAMTCKN------VASWNTM 346
+F M E+N +V++ A+++G D E+F M + + + +
Sbjct: 298 VELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCV 357
Query: 347 ITGYAQSGEITHARNLFDRMP 367
+ + ++G + A +MP
Sbjct: 358 VDLFGRAGRVEEAFEFIKKMP 378
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPR---RSS-VSYNAMISGYLLNGQLDPARQVF 115
D+ I+ + + G + AL +F + R RS+ V+Y ++++ LD RQV
Sbjct: 176 DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 235
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + L V N +I Y + SL+ +R +F+ MP+R V+SWN ML GY+++G
Sbjct: 236 SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGR 295
Query: 172 AARRIFDRMLEKNE-----ISWNGLLAAYVQNGRIEEACMLFESKANW------EVVSWN 220
A +F M E+N+ +++ +L+ G + +F N E+ +
Sbjct: 296 EAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 355
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEAPV 275
++ F + R+ +A +MP + W +++ QN ++ E A+RL E
Sbjct: 356 CVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLL-EIES 414
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
++ + + + Y G+ D+ R + + M EK +
Sbjct: 415 ENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 449
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 134/301 (44%), Gaps = 25/301 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
++++ Y G++ AR+VFD +P+RD+VS +ISGY + A +LF + +
Sbjct: 150 SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 209
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACML 207
+ V++ ++L+ + D R++ +L + N L+ Y + G + + +
Sbjct: 210 SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 269
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQNNY 262
F+S V+SWN+++ G+ K +A +F M D V++ +++G +
Sbjct: 270 FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 329
Query: 263 LAEAQRLFEE-APVKDVFT-----WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAM 315
+F E KD F + +V + + G+V+EA MP E W ++
Sbjct: 330 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL 389
Query: 316 IAGYVQTKRMDM----ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+ + + + AR L E + +N ++ + YA +G R + + M +
Sbjct: 390 LGACRVHQNVHIGEFVARRLLE-IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAV 448
Query: 372 I 372
I
Sbjct: 449 I 449
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/572 (41%), Positives = 351/572 (61%), Gaps = 41/572 (7%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIF 301
D ++++ +I + + E +R+ E K +F +++ YV+ ++EA +F
Sbjct: 54 DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF 113
Query: 302 DAMPEKNTVSWNAMIAGY---VQTKRMDMARELFEAMTCKNVASWNT------------- 345
D MPE+N VSW MI+ Y + K + +F N+ ++++
Sbjct: 114 DEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQ 173
Query: 346 -------------------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+I Y++ ++ +A +FD MP D + W +II G+AQ+
Sbjct: 174 LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSD 233
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
++L LF MKR G +++ TSVL C LA LELG+Q+H ++K F+ + NA
Sbjct: 234 GNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNA 291
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MYCKCGS+E+A AF +V+KDVISW+TM+AG A++G+ + AL LFESMK G +P+
Sbjct: 292 LIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPN 351
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT++G+L ACSH GLVEKG YF SM + +GV P +HY C++DLLGRAGRLDEA L+
Sbjct: 352 YITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLI 411
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
M EPD+ TW LLGACR++ +LA AA+ I E+EPE+AG Y+LLSN+YA + RW
Sbjct: 412 HEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWE 471
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DV++VR M +RG++K G SW+EV ++H F +GDT HP+ + I L +L ++ G
Sbjct: 472 DVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVG 531
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T VL D+ E+KE LRYHSEKLA+ +G++++ + +R+ KNLR+C DCH K
Sbjct: 532 YVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAK 591
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S++ R I++RD R+HHF G CSCGDYW
Sbjct: 592 VVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 209/460 (45%), Gaps = 61/460 (13%)
Query: 80 ALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQM------PQRDLVSWNVM 129
A+ ++M R +++Y+ +I G + ++V + + P+ +V N +
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVV--NTL 96
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR----IFDRMLEKNE 185
++ YV+ L A +LF+ MP+R+VVSW TM+S Y+ N D A + +F + N
Sbjct: 97 LNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNM 155
Query: 186 ISWNGLLAAY--VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+++ +L A + N R + C + ++ +V ++L+ + K L +A +FD MP
Sbjct: 156 FTYSSVLRACDGLPNLR-QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMP 214
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARM 299
RD V WN++I G+AQN+ EA LF+ + D T T+++ ++ R
Sbjct: 215 TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQ 274
Query: 300 IFDAMP--EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ + +++ + NA+I Y + ++ A F M K+V SW+TM+ G AQ
Sbjct: 275 VHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQ----- 329
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+GYS +L LF MK G R N VL C+
Sbjct: 330 --------------------------NGYSRQALELFESMKESGSRPNYITVLGVLFACS 363
Query: 418 NLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISW 475
+ +E G + K+ G + G L+ + + G ++EA E+ + D ++W
Sbjct: 364 HAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTW 423
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
T++ H L ++ + K + ++P+D +LS
Sbjct: 424 RTLLGACRVH--RNVDLAIYAAKKIIELEPEDAGTYILLS 461
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
++R M+R+G + ++ ++ C+ +++ GK++H + G+E FV N LL
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY K +EEA F+E+ +++V+SW TMI+ Y+ + AL M G++P+ T
Sbjct: 99 MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFT 157
Query: 510 MVGILSACS--------HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
+L AC H G+++ G E D V + ++D+ + LD
Sbjct: 158 YSSVLRACDGLPNLRQLHCGIIKTGLE------SDVFV------RSALIDVYSKWSDLDN 205
Query: 562 AQNLMKNMPFEPDAATWGALLGA 584
A + MP D W +++G
Sbjct: 206 ALGVFDEMPTR-DLVVWNSIIGG 227
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 47/224 (20%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----------------- 120
D+AL VF+ MP R V +N++I G+ N + A +F +M +
Sbjct: 204 DNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRAC 263
Query: 121 --------------------RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
+DL+ N +I Y + SL A + F M ++DV+SW+TM
Sbjct: 264 TGLALLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTM 323
Query: 161 LSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
++G AQNGY+ A +F+ M E N I+ G+L A G +E+ F S
Sbjct: 324 VAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFG 383
Query: 217 VS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMI 254
V + L+ + RL +A + M D V+W T++
Sbjct: 384 VDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLL 427
>gi|242092520|ref|XP_002436750.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
gi|241914973|gb|EER88117.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
Length = 672
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/639 (37%), Positives = 370/639 (57%), Gaps = 35/639 (5%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+RQ N ++ +R G +A +F+++P RS V++N+ ++ + AR FD MP
Sbjct: 36 VRQHNRSLMGLLRRGRFSAARRLFDALPARSVVTWNSFLAALSRRRDVRAARSFFDAMPM 95
Query: 121 RDLVSWNVMISGYVRN---KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
RD++SWN +++ Y R+ L+AAR LF+ MP+RD VSW+T+L Y + G + A+R+F
Sbjct: 96 RDIISWNTLLAAYARSLQPDHLAAARRLFDEMPQRDAVSWSTLLGAYTRRGLMEEAQRLF 155
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
D M +N SWN ++ + G++ +A +FE+ + S ++++ GF++ L +A
Sbjct: 156 DEMPHRNPASWNTMVTGFFAIGQMRKALNVFEAMPVKDSASLSAMVSGFIRNGWLHEADE 215
Query: 238 IFDR----MPVRDEV-SWNTMITGYAQNNYLAEAQRLFEEAPV--------------KDV 278
+ + M + V ++NT+I Y Q + +A+RLF P ++V
Sbjct: 216 LLTKRLRAMDMDKAVDAFNTLIAAYGQTGRVTDARRLFSMIPKTQSQHKGHKRRVFERNV 275
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+W +M+ Y++ G V AR +FD MP K+ V+WN MIAGY Q M+ A +LF +
Sbjct: 276 VSWNSMMMCYIRTGDVCSARALFDEMPFKDLVTWNTMIAGYTQASDMEEAEKLFGEVPAP 335
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ +WN MI G+ Q G++ HAR FDRMP+ I+W +I+GY Q+ + +++LF M
Sbjct: 336 DAVTWNLMIRGFTQKGDVEHARGFFDRMPEQSTITWNTMISGYEQNEDYDCTIKLFQRM- 394
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
VL+ CA+LA L LG QLH QL++ F NAL+ MY +CG +
Sbjct: 395 ----------LEVVLAACASLAMLRLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELT 443
Query: 459 EAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A F ++ KD++SWN +I GY HG +AL LF+ M++ + P IT + +LSAC
Sbjct: 444 SAKAIFSQMHTQKDLVSWNALIGGYEHHGNATEALRLFQEMRSAKVMPTHITFISLLSAC 503
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+ GLV +G F++M +YG+ P +HY +V+L+GR G+L++A ++K+MP PD A
Sbjct: 504 GNAGLVSEGQVVFHTMVHEYGLAPRVEHYAALVNLIGRHGQLEDALEVIKSMPIAPDRAV 563
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
WGA LGAC LA AA + +++PE++ YVL+ NL+A GRWG S VR M
Sbjct: 564 WGAFLGACTAKKNEVLAAVAANALSKIDPESSAPYVLMHNLHAHEGRWGSASVVREDMER 623
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
G+ K GYSW+++ +KVH F GDT HP I++ LE
Sbjct: 624 LGIHKHPGYSWIDLHDKVHVFISGDTSHPLTQEIFSVLE 662
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 224/479 (46%), Gaps = 57/479 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D W+ + + R G + A +F+ MP R+ S+N M++G+ GQ+ A VF+ MP
Sbjct: 131 DAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNPASWNTMVTGFFAIGQMRKALNVFEAMP 190
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFE-----MMPKRDVVSWNTMLSGYAQNGYADAAR 174
+D S + M+SG++RN L A L M + V ++NT+++ Y Q G AR
Sbjct: 191 VKDSASLSAMVSGFIRNGWLHEADELLTKRLRAMDMDKAVDAFNTLIAAYGQTGRVTDAR 250
Query: 175 RIFD--------------RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
R+F R+ E+N +SWN ++ Y++ G + A LF+ ++V+WN
Sbjct: 251 RLFSMIPKTQSQHKGHKRRVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPFKDLVTWN 310
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+++ G+ + + +A+ +F +P D V+WN MI G+ Q + A+ F+ P + T
Sbjct: 311 TMIAGYTQASDMEEAEKLFGEVPAPDAVTWNLMIRGFTQKGDVEHARGFFDRMPEQSTIT 370
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
W M+SGY QN D +F M E A A + +L E +
Sbjct: 371 WNTMISGYEQNEDYDCTIKLFQRMLEVVL----AACASLAMLRLGAQLHQLIEKSFLPDT 426
Query: 341 ASWNTMITGYAQSGEITHARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
A+ N ++T Y++ GE+T A+ +F +M Q D +SW A+I GY G + ++LRLF EM+
Sbjct: 427 ATNNALMTMYSRCGELTSAKAIFSQMHTQKDLVSWNALIGGYEHHGNATEALRLFQEMRS 486
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
F S+LS C N + G+ V + ++ Y VE
Sbjct: 487 AKVMPTHITFISLLSACGNAGLVSEGQ---------------VVFHTMVHEYGLAPRVEH 531
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
Y A ++ RHG +DAL E +K++ I PD L AC+
Sbjct: 532 -YAALVNLI--------------GRHGQLEDAL---EVIKSMPIAPDRAVWGAFLGACT 572
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 18/273 (6%)
Query: 39 KTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAM 98
KT +H K R + ++ WN + ++R G SA +F+ MP + V++N M
Sbjct: 258 KTQSQHKGHKRRVFER-----NVVSWNSMMMCYIRTGDVCSARALFDEMPFKDLVTWNTM 312
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
I+GY ++ A ++F ++P D V+WN+MI G+ + + AR F+ MP++ ++WN
Sbjct: 313 IAGYTQASDMEEAEKLFGEVPAPDAVTWNLMIRGFTQKGDVEHARGFFDRMPEQSTITWN 372
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGL--LAAYVQNGRIEEACMLFESKANWEV 216
TM+SGY QN D ++F RMLE + L L Q ++ E L ++ N
Sbjct: 373 TMISGYEQNEDYDCTIKLFQRMLEVVLAACASLAMLRLGAQLHQLIEKSFLPDTATN--- 429
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
N+LM + + L AK IF +M +D VSWN +I GY + EA RLF+E
Sbjct: 430 ---NALMTMYSRCGELTSAKAIFSQMHTQKDLVSWNALIGGYEHHGNATEALRLFQEMRS 486
Query: 276 KDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
V T+ +++S G V E +++F M
Sbjct: 487 AKVMPTHITFISLLSACGNAGLVSEGQVVFHTM 519
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 267/749 (35%), Positives = 400/749 (53%), Gaps = 71/749 (9%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK-------------SL 139
V +++ Y G L + F + ++++ SWN M+S YVR SL
Sbjct: 84 VLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSL 143
Query: 140 SAARNLFEMMP------------------------KRDVVSWNTMLSGYAQNGYADAARR 175
S R F P + DV +++ Y++ G + A +
Sbjct: 144 SGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHK 203
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV--------------VSWNS 221
+F M ++ SWN +++ + QNG + EA + + EV N
Sbjct: 204 VFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSND 263
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
++GG + ++ D N +I Y++ L +AQR+F+ V+D+ +W
Sbjct: 264 VVGGVLVHL------YVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSW 317
Query: 282 TAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
++++ Y QN A F M P+ TV A I G + +R+ A F +
Sbjct: 318 NSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGF-VV 376
Query: 336 TCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
C+ ++ N ++ YA+ G I AR +F+++P D ISW +I GYAQ+G + +++
Sbjct: 377 RCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAI 436
Query: 392 RLFIEMKRYGERL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+ M G + N+ + S+L +++ +L+ G ++HG+L+K FV L+
Sbjct: 437 DAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLID 495
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCG +E+A F EI + + WN +I+ HG G+ AL LF+ M+ G+K D IT
Sbjct: 496 MYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHIT 555
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
V +LSACSH+GLV++ F +M ++Y + PN KHY CMVDL GRAG L++A NL+ NM
Sbjct: 556 FVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNM 615
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
P + DA+ WG LL ACR++G EL A++ + E++ EN G YVLLSN+YA G+W
Sbjct: 616 PIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAV 675
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
KVR RDRG++K G+S + V + V F G+ HP+ IY L L K+K G+V
Sbjct: 676 KVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVP 735
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
VL DV E+EKE +L HSE+LA+ +GI+S P PIR+ KNLRVC DCHNA K+IS
Sbjct: 736 DYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYIS 795
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KI R II+RD+NRFHHF G CSCGDYW
Sbjct: 796 KITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 199/446 (44%), Gaps = 71/446 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMI-----SGYLLNGQLDP 110
D+ WN I+ +NG AL V + M + +V+ ++M+ S ++ G L
Sbjct: 212 DVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVL-V 270
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
V + D+ N +I+ Y + L A+ +F+ M RD+VSWN++++ Y QN
Sbjct: 271 HLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDP 330
Query: 171 DAARRIFDRML----EKNEISWNGLLAAYVQ--NGRIEEACMLFESKANW---EVVSWNS 221
A F ML + ++ L + + Q + RI A F + W ++V N+
Sbjct: 331 VTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNA 390
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA--------------- 266
L+ + K + A+ +F+++P RD +SWNT+ITGYAQN +EA
Sbjct: 391 LVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVP 450
Query: 267 -------------------------QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
RL + DVF T ++ Y + G++++A +F
Sbjct: 451 NQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLF 510
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEIT 357
+P++ +V WNA+I+ + A +LF+ M V ++ ++++ + SG +
Sbjct: 511 YEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVD 570
Query: 358 HARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
A+ FD M + I + ++ + ++GY E + L M + + S + ++
Sbjct: 571 EAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPI---QADASIWGTL 627
Query: 413 LSTCANLASLELGKQLHGQLVKVGFE 438
L+ C + ELG +L++V E
Sbjct: 628 LAACRIHGNAELGTFASDRLLEVDSE 653
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 15/223 (6%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F V +C N+ + KQLH L+ +G + L+ +Y G + + F+ I
Sbjct: 54 FNLVFRSCTNI---NVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 469 DKDVISWNTMIAGYARHGFGKDAL-MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
K++ SWN+M++ Y R G +D++ + E + G++PD T +L AC EK
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMH 170
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL-GACR 586
+ M ++ V + ++ L R G ++ A + +MP D +W A++ G C+
Sbjct: 171 CWVLKMGFEHDVYVAAS----LIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQ 225
Query: 587 LYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWGDV 628
+AE A V+ M+ E M V +S++ + DV
Sbjct: 226 ---NGNVAE-ALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDV 264
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 267/740 (36%), Positives = 399/740 (53%), Gaps = 57/740 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK-SLSAARNLFEMMPKR-- 152
NA++ Y G +D A +VFD MP+ +LVSWN MI + N S + L EM+ +
Sbjct: 185 NALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGL 244
Query: 153 --DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACM 206
DVV+ T+L A G D I L + + N ++ Y + G + EA M
Sbjct: 245 LPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQM 304
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR------DEVSW---------- 250
F N VVSWN+++ F + + +A + M ++ +EV+
Sbjct: 305 SFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDK 364
Query: 251 ------------------------NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
N I YA+ L A+++F K V +W A++
Sbjct: 365 LQLRSLKELHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIG 424
Query: 287 GYVQNGKVDEA-RMIFDAMPEKNTVSW---NAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G+ QNG +A ++F W ++++ K + +E+ + + +
Sbjct: 425 GHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLET 484
Query: 343 ----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
++++ Y G+ + AR LFDRM + +SW A+I+GY+Q+G +SL LF +
Sbjct: 485 DFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSL 544
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G + + SV C+ L++L LGK+ HG ++K FVG +++ MY K G ++
Sbjct: 545 SEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIK 604
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
E+ F+ + DK+V SWN +I + HG GK+A+ L+E MK VG PD T +GIL AC
Sbjct: 605 ESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACG 664
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H GLVE+G +YF M + P +HY C++D+L RAGRLD+A L+ MP E D W
Sbjct: 665 HAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIW 724
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
+LL +CR +G E+ EK A+ + E+EP+ A YVLLSNLYA G+W V +VR M++
Sbjct: 725 SSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEI 784
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
G++K G SW+EV +V++F VGD+L P+ I LE ++ + G+ +T VLH+V
Sbjct: 785 GLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEV 844
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
GEEEK +LR HSEKLA+++G+L G +R+ KNLR+C DCHNA K ISK V R I++
Sbjct: 845 GEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVV 904
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RDN RFHHF G CSC DYW
Sbjct: 905 RDNKRFHHFRDGLCSCCDYW 924
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 142/578 (24%), Positives = 250/578 (43%), Gaps = 92/578 (15%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG-YADAARRIFD 178
+ D V +I Y S +R +F+ M ++++ WN ++SGY +NG Y D + D
Sbjct: 76 RNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMD 135
Query: 179 RM----LEKNEISWNGLLAAY--VQNGRIEEAC--MLFESKANWEVVSWNSLMGGFVKQK 230
+ + + ++ ++ A + + R+ E M+ + +V N+L+G + K
Sbjct: 136 LVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCG 195
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA-----QRLFEEAPVKDVFTWTAMV 285
+ +A +FD MP + VSWN+MI +++N + ++ + L EE + DV T ++
Sbjct: 196 AVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTIL 255
Query: 286 SGYVQNGKVDEARMIFD-----AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
G+VD I + E+ V+ NAM+ Y + ++ A+ F KNV
Sbjct: 256 PVCAGEGEVDIGMGIHGLAVKLGLSEEVMVN-NAMVYMYSKCGYLNEAQMSFVKNNNKNV 314
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
SWNTMI+ ++ G++ A NL EM+
Sbjct: 315 VSWNTMISAFSLEGDVNEAFNLLQ-------------------------------EMQIQ 343
Query: 401 GERL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
GE + N +VL C + L K+LHG + F+ + NA ++ Y KCG++
Sbjct: 344 GEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALN 402
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A F I DK V SWN +I G+A++G + AL L M G +PD T+ +L AC+
Sbjct: 403 SAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACA 462
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H ++ G E + R+ G+ + T ++ G+ A+ L M + + +W
Sbjct: 463 HLKSLQYGKEIHGYVLRN-GLETDFFVGTSLLSHYIHCGKASSARVLFDRMK-DKNLVSW 520
Query: 579 GALL-----------------------------------GACRLYGKTELAEKA-AEVIF 602
A++ GAC L ++A V+
Sbjct: 521 NAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK 580
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
++ E+A + + ++YA SG + KV ++D+ V
Sbjct: 581 ALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNV 618
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 164/309 (53%), Gaps = 21/309 (6%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RL 404
+I YA G +R +FD M + I W A+++GY ++G D +++F+++ + +
Sbjct: 85 LIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQP 144
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ F SV+ C + + LG+ +HG ++K+G FVGNAL+ MY KCG+V+EA F
Sbjct: 145 DNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVF 204
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDAL-MLFESMKTVGIKPDDITMVGILSACSHTGLV 523
+ + + +++SWN+MI ++ +GF +D+ +L E + G+ PD +T+V IL C+ G V
Sbjct: 205 DFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEV 264
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ-NLMKNMPFEPDAATWGALL 582
+ G + + G+ MV + + G L+EAQ + +KN + +W ++
Sbjct: 265 DIGMG-IHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNN--NKNVVSWNTMI 321
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMY---VLLSNLYAASGRWGDVSKVRLKMRDRG 639
A L G +A ++ EM+ + M V + N+ A + K++L R
Sbjct: 322 SAFSLEGDV---NEAFNLLQEMQIQGEEMKANEVTILNVLPAC-----LDKLQL----RS 369
Query: 640 VKKVTGYSW 648
+K++ GYS+
Sbjct: 370 LKELHGYSF 378
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYCKCGSVEEAYHAFEEIVDK 470
+L C N +E G++LH + +V N L+ MY CGS ++ F+ + K
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGLVEKGTEY 529
++I WN +++GY R+G D + +F + + +PD+ T ++ AC V G E
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLG-EV 167
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+ M G++ + +V + G+ G +DEA + MP E + +W +++ A +
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP-ETNLVSWNSMICA---FS 223
Query: 590 KTELAEKAAEVIFEMEPE 607
+ + + +++ EM E
Sbjct: 224 ENGFSRDSFDLLMEMLGE 241
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 131/344 (38%), Gaps = 111/344 (32%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSM-------------------PRRSSVSYNA 97
GD + WN I H +NG ALH+ M S+ Y
Sbjct: 412 GDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGK 471
Query: 98 MISGYLLN--------------------GQLDPARQVFDQMPQRDLVSWNVMISGYVRN- 136
I GY+L G+ AR +FD+M ++LVSWN MISGY +N
Sbjct: 472 EIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNG 531
Query: 137 ----------KSLS----------------------------AARNLFEMMPKRDVVSWN 158
KSLS A + + + D
Sbjct: 532 LPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGC 591
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
+++ YA++G +R++FD + +KN SWN ++ A+ +G +EA L+E
Sbjct: 592 SIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYE--------- 642
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
+ K++G +MP D ++ ++ + E + F+E ++
Sbjct: 643 ---------RMKKVG-------QMP--DRFTYIGILMACGHAGLVEEGLKYFKEMQNFNL 684
Query: 279 FT-----WTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMI 316
+ ++ + G++D+A + + MPE+ + W++++
Sbjct: 685 IEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLL 728
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 211/367 (57%), Positives = 272/367 (74%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L CA++A+LE GKQ+H ++K+GFE V N L+ MY KCG +E+A F ++++ D
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
V SWN MI+G A+HG GK+A++LFE M G+KP+ IT V +LS CSH GLV++G YF
Sbjct: 64 VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
SM RD+G+ P ++HY+CMVDL GRAG LDEA N + MP EP+A+ WG+LLGACR++G
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
ELAE+A E + E+ PEN G YVLLSN+YAA+GRW D KVR M+DR VKK G SW+EV
Sbjct: 184 ELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEV 243
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
QNKVH F VGD+ HP+ + IY LE L ++K G++ +T VLHDV EE+KE +L +HS
Sbjct: 244 QNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHS 303
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EKLA+A+GI+S P G IRV+KNLRVC DCH A K IS+IV R I+LRD +RFHHF G
Sbjct: 304 EKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQ 363
Query: 772 CSCGDYW 778
CSCGDYW
Sbjct: 364 CSCGDYW 370
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 47/261 (18%)
Query: 314 AMIAGYVQTKRM--DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
A +A Q K++ D+ + FE +V+ N ++ Y + G I A+ +F ++ + D
Sbjct: 9 ASVAALEQGKQVHADIIKIGFEL----DVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDV 64
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
SW A+I+G AQ G ++++ LF +M + G + N+ F VLS C++ ++ G+
Sbjct: 65 ASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDS 124
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+ + G +A H ++ M+ + R G +A
Sbjct: 125 MTR------------------DHGISPKAEH------------YSCMVDLFGRAGCLDEA 154
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTG---LVEKGTEYFYSMNRDYGVIPNSKHYTC 548
L M ++P+ +L AC G L E+ E + + N Y
Sbjct: 155 LNFINQMP---VEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPE-----NPGTYVL 206
Query: 549 MVDLLGRAGRLDEAQNLMKNM 569
+ ++ AGR D+A + K M
Sbjct: 207 LSNIYAAAGRWDDAGKVRKMM 227
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 18/143 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N ++ Y G+++ A++VF ++ + D+ SWN MISG ++ A LFE M + V
Sbjct: 37 NGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVK 96
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEEAC- 205
+++ +LSG + G D R FD M + IS ++ ++ + + G ++EA
Sbjct: 97 PNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALN 156
Query: 206 ----MLFESKANWEVVSWNSLMG 224
M E A+ W SL+G
Sbjct: 157 FINQMPVEPNAS----VWGSLLG 175
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D+ N ++ Y + + A+ +F + + DV SWN M+SG AQ+G A +F++ML
Sbjct: 32 DVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQML 91
Query: 182 E----KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRL 232
+ N+I++ +L+ G ++E F+S +S ++ ++ F + L
Sbjct: 92 QTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCL 151
Query: 233 GDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLAEAQRLFE---EAPVKDVFTWTAMVSGY 288
+A ++MPV S W +++ + + A+R E E ++ T+ + + Y
Sbjct: 152 DEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIY 211
Query: 289 VQNGKVDEARMIFDAMPEKNT 309
G+ D+A + M +++
Sbjct: 212 AAAGRWDDAGKVRKMMKDRSV 232
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ D+ N + + + G + A VF+ + S+NAMISG +G A +F+Q
Sbjct: 30 ELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQ 89
Query: 118 MPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS-----WNTMLSGYAQNG 168
M Q + +++ V++SG + RN F+ M + +S ++ M+ + + G
Sbjct: 90 MLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAG 149
Query: 169 YADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEA 204
D A ++M +E N W LL A +G IE A
Sbjct: 150 CLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELA 186
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 91/201 (45%), Gaps = 13/201 (6%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
DV N ++ Y + G + A+ +F ++LE + SWN +++ Q+G +EA +LFE
Sbjct: 32 DVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQML 91
Query: 213 NWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYL 263
V +++ ++ G + + + FD M +S ++ M+ + + L
Sbjct: 92 QTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCL 151
Query: 264 AEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPE---KNTVSWNAMIAGY 319
EA + PV+ + W +++ +G ++ A + + E +N ++ + Y
Sbjct: 152 DEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIY 211
Query: 320 VQTKRMDMARELFEAMTCKNV 340
R D A ++ + M ++V
Sbjct: 212 AAAGRWDDAGKVRKMMKDRSV 232
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
++ GK A +I +VS N ++ Y + R++ A+E+F + +VASWN MI+
Sbjct: 14 LEQGKQVHADIIKIGFELDVSVS-NGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMIS 72
Query: 349 GYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
G AQ G A LF++M Q I++ +++G + +G ++ F M R
Sbjct: 73 GLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTR 127
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
M GIL AC+ +E+G + + + G + +VD+ G+ GR+++AQ + +
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIK-IGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKL 59
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFE------MEPENAGMYVLLS 616
EPD A+W A++ +G K A ++FE ++P V+LS
Sbjct: 60 -LEPDVASWNAMISGLAQHG----CGKEAVLLFEQMLQTGVKPNQITFVVVLS 107
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 265/712 (37%), Positives = 389/712 (54%), Gaps = 65/712 (9%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMM 149
++ +++ L R V Q+ R L ++ + + Y + + AR +F+ M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
P RD V+WN +++GYA+NG A+AA + RM E+ +G V + AC +
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEE-----DGERPDAVTLVSVLPACADAQ 341
Query: 210 SKANWEVVSWNSLMGGFVKQKRLG--------------DAKWIFDRMPVRDEVSWNTMIT 255
+ V ++ GGF +Q + A+ +FD M R+ VSWN MI
Sbjct: 342 ALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIK 401
Query: 256 GYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----E 306
GYA+N EA LF E V DV A+ + G +DE R + + + E
Sbjct: 402 GYAENGDATEALALFKRMVGEGVDVTDVSVLAAL-HACGELGFLDEGRRVHELLVRIGLE 460
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
N NA+I Y + KR D+A ++F+ + K SWN MI G Q+G
Sbjct: 461 SNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGS----------- 509
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
SED++RLF M+ + + S++ A+++ +
Sbjct: 510 --------------------SEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQAR 549
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+HG +++ + +V AL+ MY KCG V A F D+ VI+WN MI GY HG
Sbjct: 550 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHG 609
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
GK A+ LFE MK+ G P++ T + +LSACSH GLV++G EYF SM DYG+ P +HY
Sbjct: 610 SGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHY 669
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
MVDLLGRAG+L EA + ++ MP EP + +GA+LGAC+L+ ELAE++A+ IFE+EP
Sbjct: 670 GTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEP 729
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
E +VLL+N+YA + W DV++VR M +G++K G+S ++++N++HTF G T H
Sbjct: 730 EEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQ 789
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ IYA L +L ++K G+V T + HDV ++ K +L HSEKLA+AYG++ G
Sbjct: 790 QAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPG 848
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I++ KNLRVC+DCHNA K IS + GR II+RD RFHHF G CSCGDYW
Sbjct: 849 TTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 157/368 (42%), Gaps = 66/368 (17%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSM-----PRRSSVSY----------------------- 95
WN + + RNG ++A+ + M R +V+
Sbjct: 294 WNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFA 353
Query: 96 ------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
A++ Y G +D AR+VFD M R+ VSWN MI GY N + A
Sbjct: 354 VRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEAL 413
Query: 144 NLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY 195
LF+ M V VS L + G+ D RR+ + + LE N N L+ Y
Sbjct: 414 ALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMY 473
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWN 251
+ R + A +F+ VSWN+++ G + DA +F RM + D +
Sbjct: 474 CKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLV 533
Query: 252 TMITGYAQNNYLAEAQ-------RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
++I A + +A+ RL + +DV+ TA++ Y + G+V AR +F++
Sbjct: 534 SIIPALADISDPLQARWIHGYSIRLHLD---QDVYVLTALIDMYAKCGRVSIARSLFNSA 590
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHAR 360
+++ ++WNAMI GY +A ELFE M N ++ ++++ + +G + +
Sbjct: 591 RDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQ 650
Query: 361 NLFDRMPQ 368
F M +
Sbjct: 651 EYFSSMKE 658
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 53/273 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ N IT + + D A VF+ + ++ VS+NAMI G NG + A ++F +M
Sbjct: 462 NVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQ 521
Query: 120 ---------------------------------------QRDLVSWNVMISGYVRNKSLS 140
+D+ +I Y + +S
Sbjct: 522 LENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVS 581
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
AR+LF R V++WN M+ GY +G A +F+ M NE ++ +L+A
Sbjct: 582 IARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACS 641
Query: 197 QNGRIEEACMLFES-KANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVSWN 251
G ++E F S K ++ + G V + +L +A +MP+ +S
Sbjct: 642 HAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVY 701
Query: 252 TMITGYA---QNNYLAE--AQRLFEEAPVKDVF 279
+ G +N LAE AQR+FE P + V+
Sbjct: 702 GAMLGACKLHKNVELAEESAQRIFELEPEEGVY 734
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/574 (40%), Positives = 345/574 (60%), Gaps = 45/574 (7%)
Query: 250 WNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+++++T + E QR + + V+ T ++ Y + + +AR + D MP
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITG------------ 349
E+N VSW AMI+GY Q A LF M T N ++ T++T
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599
Query: 350 -----------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
YA++G+I AR +FD +P+ D +S AII+GYAQ G
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 659
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E++L LF ++R G R N + SVL+ + LA+L+ G+Q+H +++ + N+
Sbjct: 660 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 719
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKP 505
L+ MY KCGS+ + F+ + ++ VISWN M+ GY++HG G++A+ LF+ MK +KP
Sbjct: 720 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 779
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
D +T + +LS CSH G+ ++G E FY M N+ G P +HY C+VDL GRAGR++EA
Sbjct: 780 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 839
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
+K MPFEP AA WG+LLGACR++ + E A + E+E ENAG YV+LSNLYA++GR
Sbjct: 840 FIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGR 899
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W DV VR M+++ V K G SW+E+ +HTF D HP K+ ++A + EL K+K+
Sbjct: 900 WDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKE 959
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
G+V VL+DV +E+KE +L+ HSEKLA+A+G++ P G P+R++KNLR+C DCHN
Sbjct: 960 AGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNF 1019
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K +S++ GR + LRD NRFHH GG+CSCGDYW
Sbjct: 1020 AKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 143/291 (49%), Gaps = 23/291 (7%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKN 184
+I Y + + L AR + + MP+R+VVSW M+SGY+Q GYA A +F ML N
Sbjct: 518 LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPN 577
Query: 185 EISWNGLLAAYV-----QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
E ++ +L + Q GR + ++ ++ + +SL+ + K ++ +A+ +F
Sbjct: 578 EFTFATVLTSCTSSSGFQLGR-QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 636
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVD 295
D +P RD VS +I+GYAQ EA LF E + T+ ++++ +D
Sbjct: 637 DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 696
Query: 296 EARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
R + + V N++I Y + + +R +F++M + V SWN M+ GY+
Sbjct: 697 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 756
Query: 352 QSGEITHARNLFDRMPQH-----DCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+ G A LF M + D +++ A+++G + G + L +F EM
Sbjct: 757 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEM 807
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 145/332 (43%), Gaps = 61/332 (18%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP---------------- 119
C A V + MP R+ VS+ AMISGY G A +F +M
Sbjct: 527 CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 586
Query: 120 -----------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
+ + + ++ Y + + AR +F+ +P+RDVVS
Sbjct: 587 SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 646
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY-----VQNGRIEEACML 207
++SGYAQ G + A +F R+ + N +++ +L A + +GR + +L
Sbjct: 647 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 706
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+K + VV NSL+ + K L ++ IFD MP R +SWN M+ GY+++ EA
Sbjct: 707 -RAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 765
Query: 268 RLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMP------EKNTVSWNAMI 316
LF EE VK D T+ A++SG G D IF M E + ++
Sbjct: 766 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 825
Query: 317 AGYVQTKRMDMARELFEAMTCKNVAS-WNTMI 347
+ + R++ A E + M + A+ W +++
Sbjct: 826 DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 857
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 151/326 (46%), Gaps = 61/326 (18%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRL-- 269
VVSW +++ G+ ++ +A +F M +E ++ T++T ++ +++
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 270 --FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ + +F ++++ Y + GK+ EAR +FD +PE++ VS A+I+GY Q +
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662
Query: 328 ARELFEAMTCKNVAS---------------------------------------WNTMIT 348
A +LF + + + S N++I
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRS 407
Y++ G +T++R +FD MP+ ISW A++ GY++ G +++ LF MK + + +
Sbjct: 723 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 782
Query: 408 PFTSVLSTCANLASLELGKQLHGQLV--KVGFEA-----GCFVGNALLVMYCKCGSVEEA 460
F +VLS C++ + G ++ ++V K GFE GC V ++ + G VEEA
Sbjct: 783 TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVD-----LFGRAGRVEEA 837
Query: 461 YHAFEEI-VDKDVISWNTMIAGYARH 485
+ +++ + W +++ H
Sbjct: 838 FEFIKKMPFEPTAAIWGSLLGACRVH 863
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 64/321 (19%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMM-----P----------- 150
L AR+V D+MP+R++VSW MISGY + S A +LF EM+ P
Sbjct: 528 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 587
Query: 151 ----------------------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+ + +++L YA+ G ARR+FD + E++ +S
Sbjct: 588 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 647
Query: 189 NGLLAAYVQNGRIEEACMLFES------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+++ Y Q G EEA LF ++N+ V++ S++ L + + +
Sbjct: 648 TAIISGYAQLGLDEEALDLFRRLQREGMRSNY--VTYASVLTALSGLAALDHGRQVHSHV 705
Query: 243 PVRDEVSW-----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+R ++ + N++I Y++ L ++R+F+ P + V +W AM+ GY ++G EA
Sbjct: 706 -LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREA 764
Query: 298 RMIFDAMPEKN-----TVSWNAMIAGYVQTKRMDMARELFEAMTCKN------VASWNTM 346
+F M E+N +V++ A+++G D E+F M + + + +
Sbjct: 765 VELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCV 824
Query: 347 ITGYAQSGEITHARNLFDRMP 367
+ + ++G + A +MP
Sbjct: 825 VDLFGRAGRVEEAFEFIKKMP 845
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
+EM G + + SVL+ C + ++ G+++H ++K +E ++ L+V+Y K
Sbjct: 465 LLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNK 524
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
C + +A +E+ +++V+SW MI+GY++ G+ +AL LF M G P++ T +
Sbjct: 525 CRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATV 584
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L++C+ + + G + +S+ + + ++D+ +AG++ EA+ + +P E
Sbjct: 585 LTSCTSSSGFQLGRQ-IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP-ER 642
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
D + A++ Y + L E+A ++ ++ E
Sbjct: 643 DVVSCTAIISG---YAQLGLDEEALDLFRRLQRE 673
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPR---RSS-VSYNAMISGYLLNGQLDPARQVF 115
D+ I+ + + G + AL +F + R RS+ V+Y ++++ LD RQV
Sbjct: 643 DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 702
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + L V N +I Y + SL+ +R +F+ MP+R V+SWN ML GY+++G
Sbjct: 703 SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGR 762
Query: 172 AARRIFDRMLEKNE-----ISWNGLLAAYVQNGRIEEACMLFESKANW------EVVSWN 220
A +F M E+N+ +++ +L+ G + +F N E+ +
Sbjct: 763 EAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 822
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEAPV 275
++ F + R+ +A +MP + W +++ QN ++ E A+RL E
Sbjct: 823 CVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLL-EIES 881
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
++ + + + Y G+ D+ R + + M EK +
Sbjct: 882 ENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 916
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 134/301 (44%), Gaps = 25/301 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
++++ Y G++ AR+VFD +P+RD+VS +ISGY + A +LF + +
Sbjct: 617 SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 676
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACML 207
+ V++ ++L+ + D R++ +L + N L+ Y + G + + +
Sbjct: 677 SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 736
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQNNY 262
F+S V+SWN+++ G+ K +A +F M D V++ +++G +
Sbjct: 737 FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 796
Query: 263 LAEAQRLFEE-APVKDVFT-----WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAM 315
+F E KD F + +V + + G+V+EA MP E W ++
Sbjct: 797 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL 856
Query: 316 IAGYVQTKRMDM----ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+ + + + AR L E + +N ++ + YA +G R + + M +
Sbjct: 857 LGACRVHQNVHIGEFVARRLLE-IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAV 915
Query: 372 I 372
I
Sbjct: 916 I 916
>gi|297837203|ref|XP_002886483.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
gi|297332324|gb|EFH62742.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
Length = 1243
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/616 (38%), Positives = 364/616 (59%), Gaps = 27/616 (4%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
R N + +R+G A +F + R+ V++N MISGY+ ++ AR++FD+MP+
Sbjct: 384 FRATNKELNQMIRSGYIAEAREIFEKLEARNIVTWNTMISGYVKRREMTQARKLFDEMPE 443
Query: 121 RDLVSWNVMISGYVRN---KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
RD+V+WN MISGYV + L AR LF+ MP RD SWNTM+SGYA+N A +F
Sbjct: 444 RDVVTWNAMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRISEALLLF 503
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
++M E+N +SW+ ++ + NG + A LF + S +L+ G +K +RL +A W
Sbjct: 504 EKMPERNAVSWSAMITGFCHNGEVNRAFDLFRRMPVKDSSSLCALVAGLIKNERLEEAAW 563
Query: 238 IFDRMPVRDE------VSWNTMITGYAQNNYLAEAQRLFEEAP----------------V 275
+ + D ++NT+I GY Q + A+ LF++ P
Sbjct: 564 VLGQYGSLDSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFR 623
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
++V +W +M+ Y++ G V AR++FD M +++T+SWN MI GYV RMD A LF M
Sbjct: 624 RNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEM 683
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++ SWN M++GYA G + AR+ F++ P+ + +SW +IIA Y ++ ++++ +FI
Sbjct: 684 PNRDAHSWNMMVSGYASVGNLELARHYFEKTPEKNIVSWNSIIAAYDKNKDYKEAVDVFI 743
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M GE+ + TS+LS L +L LG Q+H +VK V NAL+ MY +CG
Sbjct: 744 RMNIDGEKPDPHTLTSLLSVSTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCG 802
Query: 456 SVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
+ E+ F+E+ + ++VI+WN +I GYA HG +AL LF SMK GI P IT V +L
Sbjct: 803 EIMESRRIFDEMKLKREVITWNAIIGGYAFHGNASEALNLFWSMKCYGIHPSHITFVSVL 862
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+AC+H GLV++ E F SM Y + P +HY+ +V+++ G+ +EA ++K+MPFEPD
Sbjct: 863 NACAHAGLVDEAKEQFLSMMSVYKIEPQMEHYSSLVNVISGQGQFEEAMYVIKSMPFEPD 922
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
WGALL ACR+Y LA AAE + +EPE++ YVLL N+YA G W + S+VR+
Sbjct: 923 KTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMN 982
Query: 635 MRDRGVKKVTGYSWLE 650
M + +KK G SW++
Sbjct: 983 MESKRIKKERGSSWVD 998
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 274/608 (45%), Gaps = 136/608 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ---LDPARQVFD 116
+I WN I+ +++ A +F+ MP R V++NAMISGY+ G L+ AR++FD
Sbjct: 414 NIVTWNTMISGYVKRREMTQARKLFDEMPERDVVTWNAMISGYVSCGGIRFLEEARKLFD 473
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+MP RD SWN MISGY +N+ +S A LFE MP+R+ VSW+ M++G+ NG + A +
Sbjct: 474 EMPSRDSFSWNTMISGYAKNRRISEALLLFEKMPERNAVSWSAMITGFCHNGEVNRAFDL 533
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEA-------------------------------- 204
F RM K+ S L+A ++N R+EEA
Sbjct: 534 FRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYGSLDSGREDLVYAYNTLIVGYGQRG 593
Query: 205 ------CML---------------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
C+ F + VVSWNS++ ++K + A+ +FD+M
Sbjct: 594 QVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMIKAYLKVGDVVSARLLFDQMK 653
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
RD +SWNTMI GY + + +A LF E P +D +W MVSGY G ++ AR F+
Sbjct: 654 DRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDAHSWNMMVSGYASVGNLELARHYFEK 713
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------------------------- 335
PEKN VSWN++IA Y + K A ++F M
Sbjct: 714 TPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEKPDPHTLTSLLSVSTGLVNLRLG 773
Query: 336 ----------TCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQS 384
+V N +IT Y++ GEI +R +FD M + + I+W AII GYA
Sbjct: 774 MQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAIIGGYAFH 833
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G + ++L LF MK YG + F SVL+ CA+ ++ K+ ++ V
Sbjct: 834 GNASEALNLFWSMKCYGIHPSHITFVSVLNACAHAGLVDEAKEQFLSMMSV--------- 884
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
+E + +V+ +I+G G ++A+ + +SM +
Sbjct: 885 ----------YKIEPQMEHYSSLVN--------VISG---QGQFEEAMYVIKSMP---FE 920
Query: 505 PDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
PD +L AC ++ GL E + + +S Y + ++ G DE
Sbjct: 921 PDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPE-----SSTPYVLLYNMYADMGLWDE 975
Query: 562 AQNLMKNM 569
A + NM
Sbjct: 976 ASQVRMNM 983
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 24/300 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D WN I ++ D A +F+ MP R + S+N M+SGY G L+ AR F++
Sbjct: 654 DRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDAHSWNMMVSGYASVGNLELARHYFEK 713
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLS---GYAQNGYA 170
P++++VSWN +I+ Y +NK A ++F M K D + ++LS G
Sbjct: 714 TPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEKPDPHTLTSLLSVSTGLVNLRLG 773
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFVKQ 229
+I + + + N L+ Y + G I E+ +F E K EV++WN+++GG+
Sbjct: 774 MQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAIIGGYAFH 833
Query: 230 KRLGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFE--------EAPVKD 277
+A +F M +++ +++ A + EA+ F E ++
Sbjct: 834 GNASEALNLFWSMKCYGIHPSHITFVSVLNACAHAGLVDEAKEQFLSMMSVYKIEPQMEH 893
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ ++SG G+ +EA + +MP E + W A++ + +A EAM+
Sbjct: 894 YSSLVNVISG---QGQFEEAMYVIKSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMS 950
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/686 (38%), Positives = 390/686 (56%), Gaps = 49/686 (7%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSGYAQ 166
A VF + + + + WN M+ GY + +A L+ +M ++ ++ +L A+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 167 NGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
+ + ++I +L E + L++ Y QNGR+E+A +F+ ++ +VVS+ +L
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF--- 279
+ G+ + A+ +FD +PV+D VSWN MI+GYA+ EA LF+E +V
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 280 -TWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEA 334
T ++S Q+ V+ R + + + N NA+I Y + +++ A LFE
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
++CK+V SWNT+I GY TH NL+ +++L LF
Sbjct: 259 LSCKDVVSWNTLIGGY------THM-NLY------------------------KEALLLF 287
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAGCFVGNALLVMYC 452
EM R GE N S+L CA+L ++++G+ +H + K + +L+ MY
Sbjct: 288 QEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYA 347
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCG +E A+ F ++ K + SWN MI G+A HG LF M+ GI+PDDIT VG
Sbjct: 348 KCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVG 407
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+LSACSH+G ++ G F SM +DY + P +HY CM+DLLG +G EA+ ++K MP E
Sbjct: 408 LLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPME 467
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
PD W +LL ACR +G ELAE A + ++EPEN G YVLLSN+YA +G W +V+KVR
Sbjct: 468 PDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVR 527
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
+ +G+KKV G S +E+ ++VH F VGD LHP IY LEE+E L++ GFV T
Sbjct: 528 ALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTS 587
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A K +SKI
Sbjct: 588 EVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIY 647
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R II RD RFHHF G CSC D+W
Sbjct: 648 KREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 193/400 (48%), Gaps = 40/400 (10%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I+ + +NG + A VF+ R VSY A+I+GY +G + A+++FD++P +D+VSWN
Sbjct: 108 ISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWN 167
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSGYAQNGYADAARRIF----DR 179
MISGY S A LF+ M K +V + T+LS AQ+ + R++ D
Sbjct: 168 AMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDH 227
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
N N L+ Y + G++E AC LFE + +VVSWN+L+GG+ +A +F
Sbjct: 228 GFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 287
Query: 240 DRMPVRDEVSWN--TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFTW----TAMVSGY 288
M +R S N T+++ +L ++ + +KDV T+++ Y
Sbjct: 288 QEM-LRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMY 346
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWN 344
+ G ++ A +F++M K+ SWNAMI G+ R + +LF M + ++
Sbjct: 347 AKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFV 406
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKR 399
+++ + SG++ R++F M Q I+ + +I SG LF E K
Sbjct: 407 GLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSG-------LFKEAKE 459
Query: 400 YGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
+ + P + S+L C +LEL + L+KV
Sbjct: 460 MIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKV 499
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 140/278 (50%), Gaps = 36/278 (12%)
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+A ++F + + + + W ++ GYA S +L+L++ M G N F +L +CA
Sbjct: 18 YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA-------------- 463
+ E G+Q+HG ++K+G+E +V +L+ MY + G +E+A+
Sbjct: 78 KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137
Query: 464 -----------------FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
F+EI KDV+SWN MI+GYA G K+AL LF+ M ++PD
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+ TMV +LSAC+ + VE G + +S D+G N K ++DL + G+++ A L
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQ-VHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLF 256
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ + + D +W L+G Y L ++A + EM
Sbjct: 257 EGLSCK-DVVSWNTLIGG---YTHMNLYKEALLLFQEM 290
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 122/556 (21%), Positives = 218/556 (39%), Gaps = 100/556 (17%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-------------------- 119
A+ VF ++ + + +N M+ GY L+ A +++ M
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 120 -------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
+ DL +IS Y +N L A +F+ RDVVS+ +
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
++GYA +G +A+ +FD + K+ +SWN +++ Y + G +EA LF+ V
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 221 SLMGGFV------KQKRLGDA--KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
M + + LG WI D + N +I Y++ + A LFE
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMA 328
KDV +W ++ GY EA ++F M N V+ +++ +D+
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318
Query: 329 R--ELFEAMTCKNVASWNTMITG----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
R ++ K+V + ++ T YA+ G+I A +F+ M SW A+I G+A
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
G + LF M++ G + F +LS C++ L+LG+ + + +
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ-------- 430
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+ + + + MI G K+A E +KT+
Sbjct: 431 ----------------------DYDITPKLEHYGCMIDLLGHSGLFKEAK---EMIKTMP 465
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
++PD + +L AC G +E + ++ + P S Y + ++ AG DE
Sbjct: 466 MEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGS--YVLLSNIYATAGEWDEV 523
Query: 563 QNL--------MKNMP 570
+ MK +P
Sbjct: 524 AKVRALLNGKGMKKVP 539
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 161/357 (45%), Gaps = 28/357 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + IT + +G SA +F+ +P + VS+NAMISGY G A ++F +M
Sbjct: 131 DVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM 190
Query: 120 QR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYAD 171
+ D + ++S +++S+ R + + S N ++ Y++ G +
Sbjct: 191 KTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVE 250
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFV 227
A +F+ + K+ +SWN L+ Y +EA +LF+ S + V+ S++
Sbjct: 251 TACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACA 310
Query: 228 KQKRLGDAKWI---FDR--MPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
+ +WI D+ V + S T +I YA+ + A ++F K + +W
Sbjct: 311 HLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 370
Query: 282 TAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMT- 336
AM+ G+ +G+ + +F M E + +++ +++ + ++D+ R +F++MT
Sbjct: 371 NAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430
Query: 337 ----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
+ + MI SG A+ + MP + D + W +++ + G E
Sbjct: 431 DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/636 (38%), Positives = 377/636 (59%), Gaps = 40/636 (6%)
Query: 176 IFDRMLEKNEI-SWNGLLAAYVQNGRIEEACMLFESKANWE-----------VVSWNSLM 223
+F+R ++K ++ SWN ++A ++G EA F S + + +SL+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
F K+ ++F D + +I Y+ L +A+++F+E P +++ +WT+
Sbjct: 91 DIF-SGKQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 284 MVSGYVQNGKV----------------DEARMIFDAMPEKNTVSWNAMIA--GYVQTKRM 325
M+ GY NG D+A M D+M + +S + +A G ++
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHS 207
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGE--ITHARNLFDRMPQHDCISWAAIIAGYAQ 383
+ + F+ + V+ NT++ YA+ GE + AR +FD++ D +S+ +I++ YAQ
Sbjct: 208 FVIKRGFD----RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 384 SGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
SG S ++ +F + K N ++VL ++ +L +GK +H Q++++G E
Sbjct: 264 SGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
VG +++ MYCKCG VE A AF+ + +K+V SW MIAGY HG AL LF +M G
Sbjct: 324 VGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
++P+ IT V +L+ACSH GL + G +F +M +GV P +HY CMVDLLGRAG L +A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+L++ M EPD+ W +LL ACR++ ELAE + +FE++P N G Y+LLS++YA S
Sbjct: 444 YDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADS 503
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
GRW DV +VR+ M++RG+ K G+S LE+ +VH F +GD HP++++IY +L EL KL
Sbjct: 504 GRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL 563
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
+ G+V +T V HDV EEEKE LR HSEKLA+A+GI++ G + V+KNLRVC DCH
Sbjct: 564 LEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCH 623
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
N IK ISKIV R ++RD RFHHF G CSCGDYW
Sbjct: 624 NVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 148/340 (43%), Gaps = 64/340 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLN--GQLDPA 111
D+ WN I R+G AL F+SM P RSS LL+
Sbjct: 40 DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA- 170
+Q F Q D+ + +I Y L AR +F+ +PKR++VSW +M+ GY NG A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 171 DAARRIFDRMLEKNE------ISWNGLLAAYVQNGRI-----EEACMLFESKANWE--VV 217
DA D ++E+N+ + G+++ R+ E+ F K ++ V
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVS 219
Query: 218 SWNSLMGGFVK--QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFE 271
N+L+ + K + + A+ IFD++ +D VS+N++++ YAQ+ EA +RL +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIK 279
Query: 272 EAPVK------------------------------------DVFTWTAMVSGYVQNGKVD 295
E V DV T+++ Y + G+V+
Sbjct: 280 EKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
AR+ FD M KN SW AMIAGY A ELF AM
Sbjct: 340 TARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/627 (39%), Positives = 360/627 (57%), Gaps = 48/627 (7%)
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMI 254
G I A +F+ V WN+++ G+ GDA ++ RM D + ++
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176
Query: 255 TGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+ L +R +F DVF +V+ Y + G+V++AR++F+ + ++N V
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIV 236
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMIT--------------------- 348
SW +MI+GY Q A +F M +NV W +++
Sbjct: 237 SWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCV 296
Query: 349 -----------------GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
YA+ G++ AR+ FD+M + + W A+I+GYA++GY+ +++
Sbjct: 297 VKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAV 356
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF EM R + S + CA + SL+L K + + K + FV AL+ M+
Sbjct: 357 GLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMF 416
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCGSV+ A F+ +DKDV+ W+ MI GY HG G+DA+ LF +MK G+ P+D+T V
Sbjct: 417 AKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFV 476
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+L+AC+H+GLVE+G E F+SM + YG+ +HY C+VDLLGR+G L+EA + + MP
Sbjct: 477 GLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPI 535
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
EP + WGALLGAC++Y L E AAE +F ++P N G YV LSNLYA+S W V+KV
Sbjct: 536 EPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKV 595
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R+ MR++G+ K GYS +E+ K+ F VGD HP I+ LE LE +LK+ GF+
Sbjct: 596 RILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHI 655
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
+ VLHD+ +EEKE L HSE+LA+AYG++S G +R+ KNLR C +CH+A K ISK+
Sbjct: 656 ESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKL 715
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
V R I++RD NRFHHF G CSC DYW
Sbjct: 716 VNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 41/301 (13%)
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
ASWN GEI +AR +FD P+ W AII GY+ + D++ ++ M+
Sbjct: 112 ASWNI--------GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
G + VL C+ + LE+GK++HGQ+ ++GFE+ FV N L+ +Y KCG VE+A
Sbjct: 164 GVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQA 223
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS-- 518
FE + D++++SW +MI+GY ++G +AL +F M+ +KPD I +V +L A +
Sbjct: 224 RIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV 283
Query: 519 ---------HTGLVEKGTEY----FYSMNRDYGV---------------IPNSKHYTCMV 550
H +V+ G E+ S+ Y IPN + M+
Sbjct: 284 EDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMI 343
Query: 551 DLLGRAGRLDEAQNLMKNM---PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+ G +EA L + M D+ T + + AC G +LA+ + I + E
Sbjct: 344 SGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYR 403
Query: 608 N 608
N
Sbjct: 404 N 404
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 188/432 (43%), Gaps = 56/432 (12%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTML 161
G++ AR+VFD+ P+ + WN +I GY + A ++ M V + +L
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176
Query: 162 SGYAQNGYADAARR----IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
+ + +R IF E + NGL+A Y + GR+E+A ++FE + +V
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIV 236
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMIT--------------------- 255
SW S++ G+ + +A IF +M R+ + W +++
Sbjct: 237 SWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCV 296
Query: 256 -----------------GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
YA+ + A+ F++ + +V W AM+SGY +NG +EA
Sbjct: 297 VKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAV 356
Query: 299 MIFDAMPEKN----TVSWNAMIAGYVQTKRMDMAR---ELFEAMTCKNVASWNT-MITGY 350
+F M KN +++ + I Q +D+A+ + +N NT +I +
Sbjct: 357 GLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMF 416
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A+ G + AR +FDR D + W+A+I GY G +D++ LF MK+ G N F
Sbjct: 417 AKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFV 476
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VD 469
+L+ C + +E G +L + G EA ++ + + G + EAY + ++
Sbjct: 477 GLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIE 536
Query: 470 KDVISWNTMIAG 481
V W ++
Sbjct: 537 PGVSVWGALLGA 548
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 161/350 (46%), Gaps = 33/350 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + + + G + A VF + R+ VS+ +MISGY NG A ++F QM
Sbjct: 203 DVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMR 262
Query: 120 QRDL-VSWNVMIS---GYVRNKSLSAARNL--------FEMMPKRDVVSWNTMLSGYAQN 167
QR++ W ++S Y + L +++ E P ++S M YA+
Sbjct: 263 QRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDL-LISLTAM---YAKC 318
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLM 223
G AR FD+M N + WN +++ Y +NG EA LF+ + + ++ S +
Sbjct: 319 GQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAI 378
Query: 224 GGFVKQKRLGDAKWIFD---RMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVF 279
+ L AKW+ D + R++V NT +I +A+ + A+ +F+ KDV
Sbjct: 379 LACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVV 438
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAM 335
W+AM+ GY +G+ +A +F AM + N V++ ++ + ++ ELF +M
Sbjct: 439 VWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM 498
Query: 336 TCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAG 380
+ + + ++ +SG + A + MP +S W A++
Sbjct: 499 KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 164/373 (43%), Gaps = 28/373 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N +++ Y G+++ AR VF+ + R++VSW MISGY +N A +F M +R+V
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
++ ++L Y + + I + LE L A Y + G++ A
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSF 327
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYL 263
F+ V+ WN+++ G+ K +A +F M + D ++ + I AQ L
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387
Query: 264 AEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
A+ + + DVF TA++ + + G VD AR +FD +K+ V W+AMI GY
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGY 447
Query: 320 VQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-- 373
R A +LF AM C N ++ ++T SG + LF M + +
Sbjct: 448 GLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARH 507
Query: 374 --WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+A ++ +SG+ ++ M S + ++L C + LG+ Q
Sbjct: 508 QHYACVVDLLGRSGHLNEAYDFITTMPI---EPGVSVWGALLGACKIYRHVTLGEYAAEQ 564
Query: 432 LVKVG-FEAGCFV 443
L + F G +V
Sbjct: 565 LFSLDPFNTGHYV 577
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 22/268 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS----VSYNAMISGYLLNGQLDPARQ 113
D +I W I+ + +NG AL +F M +R+ ++ +++ Y L+ +
Sbjct: 232 DRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKS 291
Query: 114 VFDQMPQRDL-VSWNVMIS---GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ + + L +++IS Y + + AR+ F+ M +V+ WN M+SGYA+NGY
Sbjct: 292 IHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGY 351
Query: 170 ADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACML--FESKANW--EVVSWNS 221
+ A +F M+ KN I+ + A Q G ++ A + + +K + +V +
Sbjct: 352 TNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTA 411
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPV--K 276
L+ F K + A+ +FDR +D V W+ MI GY + +A LF ++A V
Sbjct: 412 LIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPN 471
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
DV T+ +++ +G V+E +F +M
Sbjct: 472 DV-TFVGLLTACNHSGLVEEGWELFHSM 498
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H QLV G F+ + G + A F+E + V WN +I GY+ H
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
F DA+ ++ M+ G+ PD T+ +L ACS ++E G + R G +
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFR-LGFESDVFVQ 207
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
+V L + GR+++A+ + + + + + +W +++ YG+ L +A + +M
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLD-DRNIVSWTSMISG---YGQNGLPMEALRIFGQMRQ 263
Query: 607 ENA 609
N
Sbjct: 264 RNV 266
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/563 (40%), Positives = 345/563 (61%), Gaps = 30/563 (5%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG------------- 292
D V + ++ Y L E +R+F++ + VF W +++GY + G
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194
Query: 293 -----KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----- 342
+V+ AR +FD + +++ +SWN+MI+GYV + +LFE M + +
Sbjct: 195 ELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATM 254
Query: 343 -------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N ++ Y++SG + A +F+ M + +SW ++IAGYA+ G S+ S+RLF
Sbjct: 255 VSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 314
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM++ N +L CA+LA+LE G+++HG +++ GF V NAL+ MY KCG
Sbjct: 315 EMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCG 374
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
++ A F+ I +KD++SW MIAGY HG+G +A+ F M+ GI+PD+++ + IL
Sbjct: 375 ALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILY 434
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH+GL+++G +F M + + P S+HY C+VDLL RAG L +A +K MP EPDA
Sbjct: 435 ACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDA 494
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
WGALL CR+Y +LAEK AE +FE+EPEN G YVLL+N+YA + +W +V K+R ++
Sbjct: 495 TIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERI 554
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
RG++K G SW+E++ KVH F GD+ HP ++I L++ ++K++G + L
Sbjct: 555 GRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYAL 614
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
+ EKE L HSEK+A+A+GILS+P G+ +RV KNLRVC DCH K +SK+V R
Sbjct: 615 IKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRD 674
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
IILRD+NRFHHF GSCSC +W
Sbjct: 675 IILRDSNRFHHFKDGSCSCRGHW 697
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 166/379 (43%), Gaps = 77/379 (20%)
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV--SWNTMLSGYAQNGYADAARRIFDRM 180
+ +N+ I + +L A L PK D+ ++ ++L A RRI +
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHS-I 126
Query: 181 LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK------- 228
++ N++ +G+L + YV G + E +F+ AN +V WN LM G+ K
Sbjct: 127 IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRES 186
Query: 229 -----------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+R+ A+ +FD + RD +SWN+MI+GY N + LFE+ +
Sbjct: 187 LSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 246
Query: 278 VFTWTA------------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
+ T A ++ Y ++G ++ A +F+ M E++ VSW +MIAGY +
Sbjct: 247 INTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLS 306
Query: 326 DMARELFEAM-----------------TCKNVASW----------------------NTM 346
DM+ LF M C ++A+ N +
Sbjct: 307 DMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANAL 366
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+ Y + G + AR LFD +P+ D +SW +IAGY GY +++ F EM+ G +
Sbjct: 367 VDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDE 426
Query: 407 SPFTSVLSTCANLASLELG 425
F S+L C++ L+ G
Sbjct: 427 VSFISILYACSHSGLLDEG 445
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 172/402 (42%), Gaps = 64/402 (15%)
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDV--FTWTAMVSGYVQNGKVDEARMIFDAMP-- 305
+N I + + L A L ++P D+ T+ +++ + + R I +
Sbjct: 71 YNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSN 130
Query: 306 --EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG--------- 354
E + V + ++ YV + R +F+ + + V WN ++ GYA+ G
Sbjct: 131 DVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLF 190
Query: 355 ---------EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+ AR LFD + D ISW ++I+GY +G SE L LF +M G
Sbjct: 191 KRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG---- 246
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+ + A + S+EL + N LL MY K G++ A FE
Sbjct: 247 ------INTDLATMVSVELT-----------------LNNCLLDMYSKSGNLNSAIQVFE 283
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ ++ V+SW +MIAGYAR G ++ LF M+ + P+ ITM IL AC+ +E+
Sbjct: 284 TMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALER 343
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E + R+ G + +VD+ + G L A+ L +P E D +W ++
Sbjct: 344 GQEIHGHILRN-GFSLDRHVANALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVMIAG- 400
Query: 586 RLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAAS 622
YG +A EM EP+ +S LYA S
Sbjct: 401 --YGMHGYGSEAIAAFNEMRNSGIEPDEVS---FISILYACS 437
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 156/343 (45%), Gaps = 48/343 (13%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR----NKSLS--------------AAR 143
Y+ G L R++FD++ + WN++++GY + +SLS +AR
Sbjct: 146 YVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESAR 205
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN-----------EISWNG-L 191
LF+ + RDV+SWN+M+SGY NG ++ +F++ML E++ N L
Sbjct: 206 KLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCL 265
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD----E 247
L Y ++G + A +FE+ VVSW S++ G+ ++ + +F M D
Sbjct: 266 LDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNS 325
Query: 248 VSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
++ ++ A L Q + D A+V Y++ G + AR++FD
Sbjct: 326 ITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDM 385
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHA 359
+PEK+ VSW MIAGY A F M + S+ +++ + SG +
Sbjct: 386 IPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 445
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEM 397
F+ M + CI +A I+ A++G + + FI+M
Sbjct: 446 WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK-FIKM 487
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 152/322 (47%), Gaps = 34/322 (10%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSW------- 126
+SA +F+ + R +S+N+MISGY+ NG + +F+QM DL +
Sbjct: 202 ESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTL 261
Query: 127 -NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----L 181
N ++ Y ++ +L++A +FE M +R VVSW +M++GYA+ G +D + R+F M L
Sbjct: 262 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDL 321
Query: 182 EKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
N I+ +L A +E + + + + N+L+ ++K LG A+
Sbjct: 322 FPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 381
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGK 293
+FD +P +D VSW MI GY + Y +EA F E D ++ +++ +G
Sbjct: 382 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441
Query: 294 VDEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMI 347
+DE F+ M E + + ++ + + A + + M + A+ W ++
Sbjct: 442 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501
Query: 348 TGYAQSGEITHARNLFDRMPQH 369
G I H L +++ +H
Sbjct: 502 CGC----RIYHDVKLAEKVAEH 519
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 54/287 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + ++G +SA+ VF +M RS VS+ +MI+GY G D + ++F +M + DL
Sbjct: 263 NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLF 322
Query: 125 S---------------------------------------WNVMISGYVRNKSLSAARNL 145
N ++ Y++ +L AR L
Sbjct: 323 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLL 382
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F+M+P++D+VSW M++GY +GY A F+ M +E +E+S+ +L A +G +
Sbjct: 383 FDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL 442
Query: 202 EEACMLFESKANWEVVSWNS-----LMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMIT 255
+E F N + S ++ + L A MP+ D W ++
Sbjct: 443 DEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLC 502
Query: 256 G--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
G + LAE A+ +FE P ++ + + + Y + K +E +
Sbjct: 503 GCRIYHDVKLAEKVAEHVFELEP-ENTGYYVLLANIYAEAEKWEEVK 548
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/650 (38%), Positives = 369/650 (56%), Gaps = 51/650 (7%)
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV----- 227
A +F + E N++SWN ++ + + A L+ + + S NS F+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGL-SPNSYTFPFLFKSCA 89
Query: 228 KQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
K K + K I ++ D ++I+ YAQN + +A ++F+ + +DV ++TA
Sbjct: 90 KSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTA 149
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-------- 335
M++GY G +D+A+ +FD +P K+ VSWNAMI+GY + R A ELF M
Sbjct: 150 MITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPD 209
Query: 336 ---------TC---------KNVASW-------------NTMITGYAQSGEITHARNLFD 364
TC + + SW N +I Y++ GE+ A LF+
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+ D ISW +I GYA + +++L +F EM + GE N S+L CA+L ++++
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329
Query: 425 GKQLHGQLVKV--GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G+ +H + K G + +L+ MY KCG++E A F+ I++K + S N MI G+
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A HG A L MK GI+PDDIT VG+LSACSH GL + G + F SM DY + P
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPK 449
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CM+DLLGR+G EA+ L+ +M EPD WG+LL AC+++ EL E A+ +
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLM 509
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
++EP+N G YVLLSN+YA S RW DV++VR + D+G+KKV G S +E+ + VH F +GD
Sbjct: 510 KIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGD 569
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP+ IY LEE++ L + GFV T VL ++ EE KE L YHSEKLA+A+G++S
Sbjct: 570 KFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLIS 629
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
G +R++KNLRVC +CH A K ISKI R II RD +RFHHF G C
Sbjct: 630 TKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 184/407 (45%), Gaps = 38/407 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ I+ + +NG + A VF++ R VSY AMI+GY G +D A+++FD++P
Sbjct: 112 DLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIP 171
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARR 175
+D+VSWN MISGY A LF M K DV + T+LS +G + R+
Sbjct: 172 IKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQ 231
Query: 176 IF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
I + N N L+ Y + G +E A LFE +V+SWN+L+GG+
Sbjct: 232 IHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINH 291
Query: 232 LGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFT----W 281
+A +F M E + TM++ +L ++ + +K + T
Sbjct: 292 HKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQ 351
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV- 340
T+++ Y + G ++ A +FD + K+ S NAMI G+ R D A +L M +
Sbjct: 352 TSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIE 411
Query: 341 ---ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLR 392
++ +++ + +G R +F M I + +I +SG
Sbjct: 412 PDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSG------- 464
Query: 393 LFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C +LELG+ + +L+K+
Sbjct: 465 LFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKI 511
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/720 (35%), Positives = 402/720 (55%), Gaps = 53/720 (7%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQN 167
R+VF+ M +R++V+W +++GY++ L +LF M V +++++LS A
Sbjct: 111 RKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQ 170
Query: 168 GYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
G D + + + ++ S N L+ Y + G +EEA ++F ++VSWN+LM
Sbjct: 171 GMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLM 230
Query: 224 GGFVKQKRLGDAKWIF----DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
G V R +A +F + + E +++T+I A +L A++L
Sbjct: 231 AGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFH 290
Query: 280 TW----TAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEA 334
++ TA++ Y + G++D+A +F M +N VSW AMI G +Q + +A LF
Sbjct: 291 SYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSR 350
Query: 335 MTCKNVA----SWNTMIT-------------------------------GYAQSGEITHA 359
M VA +++T++T Y++ A
Sbjct: 351 MREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEA 410
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
++F + Q D +SW+A++ YAQ+G + FI+M +G + N +S + CA+
Sbjct: 411 LSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASP 470
Query: 420 AS-LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
A+ ++LG+Q H +K V +AL+ MY + GS+E A FE D+D++SWN+M
Sbjct: 471 AAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSM 530
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
++GYA+HG+ + AL +F M+ GI D +T + ++ C+H GLVE+G +YF M RDYG
Sbjct: 531 LSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYG 590
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P HY CMVDL RAG+LDE +L++ MPF W ALLGACR++ EL + AA
Sbjct: 591 ITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAA 650
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
E + +EP ++ YVLLSN+Y+A+G+W + +VR M + V+K G SW++++NKVH F
Sbjct: 651 EKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFF 710
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
D HP ++IYA L + KLKQ+G+ T V HDV E++KE ML HSE+LA+A+
Sbjct: 711 IASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAF 770
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G+++ P P+ + KNLRV D H +K +S+I R I++RD RFHHF G CSCGD+W
Sbjct: 771 GLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 385 GYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF- 442
G+ +L F++ +R G + ++ C ++ LGKQLH V+ G + G
Sbjct: 33 GFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIR 92
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
VG +L+ MY SV + FE ++ ++V++W +++ GY + G D + LF M+ G
Sbjct: 93 VGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEG 152
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+ P+ T +LS + G+V+ G ++ ++ + +G ++++ + G ++EA
Sbjct: 153 VWPNPFTFSSVLSMVASQGMVDLG-QHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEA 211
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGK 590
+ + M D +W L+ L G+
Sbjct: 212 RVVFCRMETR-DMVSWNTLMAGLVLNGR 238
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/723 (35%), Positives = 406/723 (56%), Gaps = 57/723 (7%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNV 66
+R + + ++++H + + A +N P + + L + + + I Q N
Sbjct: 3 MRPITNKGLIYRHNLCLRCNSTLAVSNHEPITQKTRSFLETTTTSTA-------IFQCNS 55
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
I+ RNG A +F M RS VS+NAMIS Y NG++ A QVFD+MP R S+
Sbjct: 56 QISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATTSY 115
Query: 127 NVMISGYVRNK-SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-- 183
N MI+ ++NK L A LF +P+++ VS+ TM++G+ + G D A ++ K
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLYAETPVKFR 175
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ ++ N LL+ Y++ G+ EA +FE A EVVS++S++ G+ K R+ DA+ +FDRMP
Sbjct: 176 DPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDRMP 235
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK----------------------- 276
R+ ++W MI GY + + + LF +E V+
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFFRYREGS 295
Query: 277 -------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
D+F +++S Y + G + EA+ +F M K++VSWN++I G VQ +
Sbjct: 296 QIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQRE 355
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
++ A ELFE M K++ SW MI G++ GEI+ LF MP+ D I+W A+I+ +
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWTAMISAFVS 415
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+GY E++L F +M R N F+SVLS A+LA L G Q+HG++VK+ V
Sbjct: 416 NGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNMANDLSV 475
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
N+L+ MYCKCG+ +AY F I + +++S+NTMI+G++ +GFGK+A+ LF +++ G
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKLFSMLESTGK 535
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ +T + +LSAC H G V+ G +YF SM YG+ P HY CMVDL GR+G LDEA
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFGRSGLLDEAY 595
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
NL+ MP EP + WG+LL A + + + +LAE AA+ + E+EP++A YV+LS LY+ G
Sbjct: 596 NLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSMVG 655
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+ D ++ + + +KK G SW+ ++ +VH F GD H LEE+ F L
Sbjct: 656 KNSDCDRIMNIKKSKRIKKDPGSSWIILKGQVHNFLAGDESHLN-------LEEIAFTLD 708
Query: 684 QDG 686
G
Sbjct: 709 MIG 711
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/537 (42%), Positives = 334/537 (62%), Gaps = 8/537 (1%)
Query: 250 WNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
WN+ + A+ + +A LF + D FT ++++ + + R++ +
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 306 E----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
+ N N ++ Y M AR LFE M ++V +WN MI + G+ A +
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF RMP+ + SW ++IAGY Q G +++++ LF +M+ G + N +VL+ CA+L +
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L+LG ++H + GF+ + N L+ MY KCG +EEA FEE+ ++ V+SW+ MI G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
A HG ++AL LF M VGI+P+ +T +G+L ACSH GL+ +G +F SM RDYG+IP
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 395
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+HY CMVDLL RAG L EA + NMP +P+ WGALLGACR++ E+AE+A + +
Sbjct: 396 QIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL 455
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
E++P N G YV+LSN+YA +GRW D ++VR M+DR VKK G+S + V VH F G
Sbjct: 456 LELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAG 515
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
+ HP+ ++I+ EEL +++ G+V +T +VL D+ E EK + HSEKLA+ +G++
Sbjct: 516 EESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLM 575
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ PA PIR+MKNLR+CEDCH+A K IS IV R I++RD NRFH F+ SCSC DYW
Sbjct: 576 NTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 49/284 (17%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y G++ AR +F++MPQRD+V+WN+MI+ ++ A +LF MP+R+V
Sbjct: 167 NMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVR 226
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA----------------- 194
SW +M++GY Q G A A +F +M E NE++ +LAA
Sbjct: 227 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 286
Query: 195 ------------------YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
YV+ G +EEAC +FE VVSW++++GG R +A
Sbjct: 287 NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEAL 346
Query: 237 WIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSG 287
+F M + V++ ++ + ++E +R F + + + + MV
Sbjct: 347 RLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDL 406
Query: 288 YVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMARE 330
+ G + EA MP K N V W A++ K ++MA E
Sbjct: 407 LSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEE 450
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 133/312 (42%), Gaps = 57/312 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN+ I ++ G + A +F+ MP R+ S+ +MI+GY+ G+ A +F +M
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252
Query: 120 Q---------------------------------------RDLVSWNVMISGYVRNKSLS 140
+ R++ N +I YV+ L
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A +FE M +R VVSW+ M+ G A +G A+ A R+F M +E N +++ GLL A
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS 372
Query: 197 QNGRIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G I E F S ++ + ++ + L +A MP++ + V W
Sbjct: 373 HMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVW 432
Query: 251 NTMITG--YAQNNYLAEA--QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++ +N +AE + L E P+ D + + + + Y + G+ ++ + M +
Sbjct: 433 GALLGACRVHKNVEMAEEAIKHLLELDPLNDGY-YVVLSNIYAEAGRWEDTARVRKFMKD 491
Query: 307 ---KNTVSWNAM 315
K T W+++
Sbjct: 492 RQVKKTPGWSSI 503
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 261/745 (35%), Positives = 396/745 (53%), Gaps = 117/745 (15%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
DL +WN++++ YV++ L A LF+ MP+R+ +S+ T++ GYA++ A +F R+
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 182 ----EKNEISWNGLLAAYVQNGRIE-----EACMLFESKANWEVVSWNSLMGGFVKQKRL 232
E N + +L V E AC +F+ +L+ + R+
Sbjct: 132 REGHELNPFVFTTILKLLVSMDCGELGWGIHAC-IFKLGHESNAFVGTALIDAYSVCGRV 190
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---------------- 276
A+ +FD + +D VSW M+T +A+N+ EA +LF + +
Sbjct: 191 DVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKAC 250
Query: 277 -----------------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
D++ A++ Y ++G +D+AR F+ +P+K+ + W+
Sbjct: 251 LGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWS 310
Query: 314 AMIAGYVQTKRMDMARELF----EAMTCKNVASW-------------------------- 343
MIA Y Q+ + A E+F +A+ N ++
Sbjct: 311 FMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKI 370
Query: 344 ---------NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRL 393
N ++ YA+ G + ++ LF P ++D W +I G+ Q G E +LRL
Sbjct: 371 GLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRL 430
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F+ M Y + ++S L CA+LA+LE G Q+H VK F+ V NAL+ MY K
Sbjct: 431 FLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAK 490
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CGS+++A F+ + +D +SWN MI+GY+ HG
Sbjct: 491 CGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL-------------------------- 524
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
AC++ GL+++G YF SM +D+G+ P +HYTCMV LLGR G LD+A L+ +PF+P
Sbjct: 525 --ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQP 582
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
W ALLGAC ++ EL +A+ + EMEP++ +VLLSN+YA + RW +V+ VR
Sbjct: 583 SVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRK 642
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M+ +GVKK G SW+E Q VH+F+VGDT HPE I LE L K K+ G++ + +
Sbjct: 643 NMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNV 702
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
VL DV +EEKE +L HSE+LA+++GI+ P+G PIR+MKNLR+C DCH AIK ISK+V
Sbjct: 703 VLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQ 762
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R I++RD NRFHHF G CSCGDYW
Sbjct: 763 REIVVRDINRFHHFQEGLCSCGDYW 787
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 211/464 (45%), Gaps = 81/464 (17%)
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C + + ++ +WN L+ +VK L DA +FD MP R+ +S+ T+I GYA++
Sbjct: 62 CEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFL 121
Query: 265 EAQRLF--------EEAPV-------------------------------KDVFTWTAMV 285
EA LF E P + F TA++
Sbjct: 122 EAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALI 181
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------- 335
Y G+VD AR +FD + K+ VSW M+ + + A +LF M
Sbjct: 182 DAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNF 241
Query: 336 -------TCKNVASWNT----------------------MITGYAQSGEITHARNLFDRM 366
C + +++ ++ Y +SG+I AR F+ +
Sbjct: 242 TFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEI 301
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
P+ D I W+ +IA YAQS S++++ +F +M++ N+ F SVL CA + L LG
Sbjct: 302 PKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGN 361
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNTMIAGYARH 485
Q+H ++K+G + FV NAL+ +Y KCG +E + F E + DV WNT+I G+ +
Sbjct: 362 QIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQL 421
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G G+ AL LF +M ++ ++T L AC+ +E G + +S+ +
Sbjct: 422 GDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ-IHSLTVKTTFDKDIVV 480
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
++D+ + G + +A+ L+ ++ + D +W A++ ++G
Sbjct: 481 TNALIDMYAKCGSIKDAR-LVFDLMNKQDEVSWNAMISGYSMHG 523
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 148/281 (52%), Gaps = 17/281 (6%)
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
E+ + C ++ +WN ++ Y +S + A LFD MP+ + IS+ +I GYA+S +
Sbjct: 63 EILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
++ LF+ + R G LN FT++L ++ ELG +H + K+G E+ FVG AL+
Sbjct: 123 AIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALID 182
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
Y CG V+ A F+ I+ KD++SW M+ +A + K+AL LF M+ VG KP++ T
Sbjct: 183 AYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFT 242
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY------TCMVDLLGRAGRLDEAQ 563
+ AC G E F +G S++ ++DL ++G +D+A+
Sbjct: 243 FASVFKAC-------LGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDAR 295
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ +P + D W ++ Y +++ +++A E+ F+M
Sbjct: 296 XAFEEIP-KKDVIPWSFMIAR---YAQSDQSKEAVEMFFQM 332
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 163/390 (41%), Gaps = 69/390 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQV- 114
D+ W +T N C AL +F+ M + ++ ++ ++ L D + V
Sbjct: 204 DMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVH 263
Query: 115 ---FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ DL ++ Y ++ + AR FE +PK+DV+ W+ M++ YAQ+ +
Sbjct: 264 GCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSK 323
Query: 172 AARRIFDRMLEK----NEISWNGLLAAYVQ----NGRIEEACMLFESKANWEVVSWNSLM 223
A +F +M + N+ ++ +L A N + C + + + +V N+LM
Sbjct: 324 EAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALM 383
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLAEAQRLF------------ 270
+ K R+ ++ +F P R++V+ WNT+I G+ Q +A RLF
Sbjct: 384 DVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATE 443
Query: 271 ---------------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+ KD+ A++ Y + G + +AR++FD
Sbjct: 444 VTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDL 503
Query: 304 MPEKNTVSWNAMIAGY-------VQTKRMDMARELFEAMTCKN-----VASWNTMITGYA 351
M +++ VSWNAMI+GY +D + F +M + + + M+
Sbjct: 504 MNKQDEVSWNAMISGYSMHGLACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLG 563
Query: 352 QSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ G + A L D +P Q + W A++
Sbjct: 564 RGGHLDKAVKLIDEIPFQPSVMVWRALLGA 593
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN I H++ G + AL +F +M + + V+Y++ + L+P Q+
Sbjct: 407 DVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIH 466
Query: 116 DQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA- 170
+ +D+V N +I Y + S+ AR +F++M K+D VSWN M+SGY+ +G A
Sbjct: 467 SLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLAC 526
Query: 171 ------DAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEEACMLF-ESKANWEVVS 218
D + F M++ + I + ++ + G +++A L E V+
Sbjct: 527 ANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMV 586
Query: 219 WNSLMGGFV 227
W +L+G V
Sbjct: 587 WRALLGACV 595
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 381 YAQSGYSEDSLRLFIEMKRY--GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+++ G+S S +L E + N + + L C GK LH +++K G
Sbjct: 11 FSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGC 70
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
F N LL MY K + +A F+E+ +++ IS+ T+I GYA +A+ LF +
Sbjct: 71 LDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL 130
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G + + IL E G + + G N+ T ++D GR
Sbjct: 131 HREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFK-LGHESNAFVGTALIDAYSVCGR 189
Query: 559 LDEAQNLMKNMPFEPDAATWGALL 582
+D A+ + + ++ D +W ++
Sbjct: 190 VDVAREVFDGILYK-DMVSWTGMV 212
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/563 (41%), Positives = 356/563 (63%), Gaps = 4/563 (0%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNE 185
N IS R ++ AR +F+ M KRD W TM+SGY + G + AR++FDR +K+
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
I W +++ Y++ RIEEA LF VVSWN+++ G+ + R +A +F RMP R
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPER 168
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ VSWNT++T A + +A+RLF E +DV +WT MV+G +NG+VD AR +FD MP
Sbjct: 169 NVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMP 228
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+N VSWNAMIAGY Q R D A +LFE M +++ SWNTM+TG+ Q+G++ A LF
Sbjct: 229 IRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHA 288
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLEL 424
MPQ + I+W A++ GY Q G SE++L+LF +M+ G + F +VL C++LA L
Sbjct: 289 MPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPE 348
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD--KDVISWNTMIAGY 482
G+Q+H + K F+ +V +AL+ MY KCG A F++ + D+I+WN MIA Y
Sbjct: 349 GQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAY 408
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A HG+G +A+ LF M+ +G + +D+T VG+L+ACSH GL ++G +YF + ++ +
Sbjct: 409 AHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVR 468
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
HYTC++DL GRAGRLDEA N+++ + E + WGALL C ++G ++ + A+ +
Sbjct: 469 EDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVL 528
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+MEPENA Y+L SN+YA+ G + + VR+KM+ +G+KK G SW++V N V F V D
Sbjct: 529 KMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVND 588
Query: 663 TLHPEKDRIYAYLEELEFKLKQD 685
H + + + L +L K+K++
Sbjct: 589 KSHSQFEMLKYLLLDLHTKMKKN 611
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 257/486 (52%), Gaps = 45/486 (9%)
Query: 46 NSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN 105
N + R+ ++++ N I+ R G + A VF+ M +R S + MISGY+
Sbjct: 30 NLRIRSSSTATLTSEMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKC 89
Query: 106 GQLDPARQVFDQM-PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
G ++ AR++FD+ Q+ ++ W M+SGY++ + A LF MP R+VVSWNTM+ GY
Sbjct: 90 GLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGY 149
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
A+NG A +F RM E+N +SWN ++ A GRI++A LF +VVSW +++
Sbjct: 150 ARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVA 209
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G K R+ A+ +FD+MP+R+ VSWN MI GYAQN EA +LFE P +D+ +W M
Sbjct: 210 GLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTM 269
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--------- 335
V+G++QNG ++ A +F AMP+KN ++W AM+ GYVQ + A +LF M
Sbjct: 270 VTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPT 329
Query: 336 ---------TCKNVASW----------------------NTMITGYAQSGEITHARNLFD 364
C ++A + +I Y++ G+ A+ +FD
Sbjct: 330 TGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFD 389
Query: 365 R-MPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
+ H D I+W +IA YA GY +++ LF +M+ G + N + +L+ C++
Sbjct: 390 DGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLF 449
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYC-KCGSVEEAYHAFEEIVDKDVIS-WNTMIA 480
+ G + +L+K + L+ C + G ++EA + E + + +S W ++A
Sbjct: 450 DEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLA 509
Query: 481 GYARHG 486
G + HG
Sbjct: 510 GCSVHG 515
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 219/428 (51%), Gaps = 28/428 (6%)
Query: 45 LNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL 104
+N + +P + W ++ +++ + A +FN MP R+ VS+N MI GY
Sbjct: 92 INEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYAR 151
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
NG+ A +F +MP+R++VSWN +++ + A LF M +RDVVSW TM++G
Sbjct: 152 NGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGL 211
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
++NG DAAR +FD+M +N +SWN ++A Y QNGR +EA LFE ++ SWN+++
Sbjct: 212 SKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVT 271
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
GF++ L A+ +F MP ++ ++W M+TGY Q+ EA +LF + D T
Sbjct: 272 GFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTG 331
Query: 285 VSGYVQNGKVDEA---------RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
V D A +MI + +++T +A+I Y + +A+++F+
Sbjct: 332 TFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDG 391
Query: 336 TC--KNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSED 389
++ +WN MI YA G A NLF++M Q + +++ ++ + +G ++
Sbjct: 392 LSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDE 451
Query: 390 SLRLFIEM--KRYGERLNRSPFTSVLSTCANLASLE--------LGKQLHGQLVKVGFEA 439
+ F E+ RY + + +T ++ C L+ LGK++ L A
Sbjct: 452 GFKYFDELLKNRYIQ-VREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWG-ALLA 509
Query: 440 GCFV-GNA 446
GC V GNA
Sbjct: 510 GCSVHGNA 517
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 85/206 (41%), Gaps = 22/206 (10%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
++ ++ +L L+ +++ ++V+ GF V + +C+ G V+EA E+
Sbjct: 673 YSLIVYVKVSLGDLDFALKMYNEMVRRGFSESSLV-YTFIRAFCEKGRVDEAIGLMTEME 731
Query: 469 DKDVISWN----TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH----- 519
K + +++ +I G A G + +FE M +VG P + +
Sbjct: 732 GKGLRAYDETYECVIVGCADSGRLNECWSVFEEMLSVGFVPSGLLFDKVAEKLCDGEVEK 791
Query: 520 -----TGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN---LMKN 568
T L++KG ++ +Y M + P Y+ M+ ++D+A+ +MK
Sbjct: 792 VNDMLTVLLDKGFLPSDIYYEMEYK-SMCPGFSVYSSMIQCFCHLDKVDDAEKYLRIMKG 850
Query: 569 MPFEPDAATWGALLGACRLYGKTELA 594
P+ + + L+ G E A
Sbjct: 851 RSLAPNVSIYEKLIADHMQKGNDESA 876
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/553 (42%), Positives = 340/553 (61%), Gaps = 10/553 (1%)
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGY-- 288
AK IF + + WNT + +A+ + A+A LF E D +T + ++
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 289 ---VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
V+NGK+ + + + N N ++ Y + +AR++F+ M ++V +WN
Sbjct: 126 LLDVRNGKIVHGYVEKLGL-QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNI 184
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MI + G+ A LF MP+ + SW ++I GYAQ G S++++ LF+EM+ G N
Sbjct: 185 MIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPN 244
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+VL CA++ +L LG+++H + G+E V N L+ MY KCG +E+A F+
Sbjct: 245 EVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFD 304
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ ++ V+SW+ MIAG A HG +DAL LF M G+KP+ +T +GIL ACSH G+VEK
Sbjct: 305 NMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEK 364
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G +YF SM RDYG++P +HY CMVDL RAG L EA + NMP P+ WGALLG C
Sbjct: 365 GRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC 424
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
+++ +LAE+A + +++P N G YV+LSN+YA +GRW DV++VR MRDRGVKK G
Sbjct: 425 KVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPG 484
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
+S + V+ V+ F GD HP+ + I+ E+L ++K G+V +T +VL D+ E++KE
Sbjct: 485 WSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEK 544
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L HSEKLAV +G++ G IR+MKNLRVCEDCH A+K IS + R I++RD NRFH
Sbjct: 545 FLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFH 604
Query: 766 HFSGGSCSCGDYW 778
F GSCSCGDYW
Sbjct: 605 CFKNGSCSCGDYW 617
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 154/331 (46%), Gaps = 29/331 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y L G++ AR+VFD+MPQRD+++WN+MI+ V+ A LF MP+R+V
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNG------RIEEAC 205
SW +M+ GYAQ G + A +F M L NE++ +L A G RI +
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHD-- 269
Query: 206 MLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
F +++ +E + N+L+ +VK L DA IFD M R VSW+ MI G A +
Sbjct: 270 --FSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRA 327
Query: 264 AEAQRLFEE---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNA 314
+A LF + VK + T+ ++ G V++ R F +M + +
Sbjct: 328 EDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC 387
Query: 315 MIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
M+ + + + A E M N W ++ G I A + + D ++
Sbjct: 388 MVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLN 447
Query: 374 ---WAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+ + YA++G ED R+ M+ G
Sbjct: 448 DGYYVVLSNIYAEAGRWEDVARVRKLMRDRG 478
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 33/275 (12%)
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A + ++A+ +F + + W + +A+ D++ LF ++ + + +
Sbjct: 58 AFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCS 117
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
VL C+ L + GK +HG + K+G ++ F+ N ++ +Y CG + A F+++ +
Sbjct: 118 FVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQR 177
Query: 471 DVISWNTMIA-------------------------------GYARHGFGKDALMLFESMK 499
DVI+WN MIA GYA+ G K+A+ LF M+
Sbjct: 178 DVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEME 237
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
G+ P+++T+V +L AC+ G + G NR G N + ++D+ + G L
Sbjct: 238 DAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRS-GYEKNIRVCNTLIDMYVKCGCL 296
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
++A + NM E +W A++ +G+ E A
Sbjct: 297 EDACRIFDNME-ERTVVSWSAMIAGLAAHGRAEDA 330
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 24/282 (8%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
Q ++ N+++ Y + AR +F+ MP+RDV++WN M++ + G A+ A ++F
Sbjct: 145 QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAE 204
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW-----EVVSWNSL-----MGGFVKQ 229
M E+N SW ++ Y Q G+ +EA LF + EV L MG V
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLG 264
Query: 230 KRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+R+ D +R + NT+I Y + L +A R+F+ + V +W+AM++G
Sbjct: 265 RRIHDFS---NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGL 321
Query: 289 VQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKN 339
+G+ ++A +F+ M + N V++ ++ ++ R+ F +MT
Sbjct: 322 AAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPR 381
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ + M+ ++++G + A MP + + W A++ G
Sbjct: 382 IEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 18/269 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A VF+ MP+R +++N MI+ + G + A ++F +MP+R++ SW MI GY +
Sbjct: 167 ARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKS 226
Query: 140 SAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFD----RMLEKNEISWNGL 191
A +LF M + V+ +L A G RRI D EKN N L
Sbjct: 227 KEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTL 286
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDE 247
+ YV+ G +E+AC +F++ VVSW++++ G R DA +F++M +
Sbjct: 287 IDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNA 346
Query: 248 VSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
V++ ++ + + + ++ F + V + + MV + + G + EA
Sbjct: 347 VTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIM 406
Query: 303 AMP-EKNTVSWNAMIAGYVQTKRMDMARE 330
MP N V W A++ G K + +A E
Sbjct: 407 NMPIAPNGVVWGALLGGCKVHKNIKLAEE 435
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/512 (21%), Positives = 190/512 (37%), Gaps = 98/512 (19%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ + SS+ + + S N A+ +F + ++ WN + + S +
Sbjct: 37 HLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPAD 96
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-------------LEKNEISW 188
A +LF + + D+ Y + A R+ D L+ N
Sbjct: 97 AISLFYRLREFDISP-----DHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N ++ Y G I A +F+ +V++WN ++ VK A +F MP R+
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFD-- 302
SW +MI GYAQ EA LF E + + T A++ G + R I D
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271
Query: 303 --AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
+ EKN N +I YV+ ++ A +F+ M + V SW+ MI G A G
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGR----- 326
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+ED+L LF +M G + N F +L C+++
Sbjct: 327 --------------------------AEDALALFNKMINTGVKPNAVTFIGILHACSHMG 360
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+E G++ + + G V H + M+
Sbjct: 361 MVEKGRKYFASMTR------------------DYGIVPRIEH------------YGCMVD 390
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDY 537
++R G ++A E + + I P+ + +L C + L E+ T + ++
Sbjct: 391 LFSRAGLLQEA---HEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDP-- 445
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
N +Y + ++ AGR ++ + K M
Sbjct: 446 ---LNDGYYVVLSNIYAEAGRWEDVARVRKLM 474
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 155/369 (42%), Gaps = 38/369 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN+ I ++ G + A +F MP R+ S+ +MI GY G+ A +F +M
Sbjct: 178 DVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEME 237
Query: 120 QRDLVSWNVMISGYVRN----KSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYAD 171
L+ V + + +L R + + + +++ NT++ Y + G +
Sbjct: 238 DAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLE 297
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMG--- 224
A RIFD M E+ +SW+ ++A +GR E+A LF N V V++ ++
Sbjct: 298 DACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACS 357
Query: 225 --GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-KDVFTW 281
G V++ R A D V + M+ +++ L EA P+ + W
Sbjct: 358 HMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVW 417
Query: 282 TAMVSGYVQNGKV---DEARMIFDAMPEKNTVSWNAMIAGYVQTKR-MDMA--RELFEAM 335
A++ G + + +EA + N + + Y + R D+A R+L
Sbjct: 418 GALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477
Query: 336 TCKNVASWNT-MITGYAQ---SGEITHARNLFDRMPQHDCI--SWAAIIAGYAQSGYSED 389
K W++ M+ G +G+ TH PQ + I +W ++ GY +
Sbjct: 478 GVKKTPGWSSIMVEGVVYNFVAGDDTH--------PQTEEIFQTWEKLLQRMKLKGYVPN 529
Query: 390 SLRLFIEMK 398
+ + ++M+
Sbjct: 530 TSVVLLDME 538
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/685 (35%), Positives = 393/685 (57%), Gaps = 63/685 (9%)
Query: 123 LVSWNVMISGYVRNKSLSA---------ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
L+ + SG++ K + A AR +F+ +P+ + WN ++ GY++N + A
Sbjct: 44 LLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDA 103
Query: 174 RRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMG 224
++ M + + ++ LL A ++Q GR A +F + +V N L+
Sbjct: 104 LLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFVQNGLIA 162
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
+ K +RLG A+ +F+ +P+ P + + +WTA+
Sbjct: 163 LYAKCRRLGSARTVFEGLPL-----------------------------PERTIVSWTAI 193
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIA---GYVQTKRMDMARELFEAMTCKNV 340
VS Y QNG+ EA IF M + + W A+++ + + + R + ++ +
Sbjct: 194 VSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 341 A-------SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
S NTM YA+ G++ A+ LFD+M + I W A+I+GYA++GY+ +++ +
Sbjct: 254 EIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM R + TS +S CA + SLE + ++ + + + F+ +AL+ M+ K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CGSVE A F+ +D+DV+ W+ MI GY HG ++A+ L+ +M+ G+ P+D+T +G+
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L AC+H+G+V +G +F+++ D+ + P +HY C++DLLGRAG LD+A ++K MP +P
Sbjct: 431 LMACNHSGMVREGW-WFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
WGALL AC+ + EL E AA+ +F ++P N G YV LSNLYAA+ W V++VR+
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
+M+++G+ K G SW+EV+ ++ F VGD HP + I +E +E +LK+ GFV +
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
LHD+ +EE E L HSE++A+AYG++S P G P+R+ KNLR C +CH A K ISK+V
Sbjct: 610 SLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVD 669
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R I++RD NRFHHF G CSCGDYW
Sbjct: 670 REIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 69/350 (19%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA---------------------------- 111
A VF+ +PR +NA+I GY N A
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 112 -----------RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE--MMPKRDVVSWN 158
QVF D+ N +I+ Y + + L +AR +FE +P+R +VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKN-EISWNGLLAAY--------VQNGRIEEACMLFE 209
++S YAQNG A IF M + + + W L++ ++ GR A ++
Sbjct: 192 AIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-- 249
Query: 210 SKANWEV-----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
K E+ +S N++ + K ++ AK +FD+M + + WN MI+GYA+N Y
Sbjct: 250 -KMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 265 EAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMI 316
EA +F E KDV + T+ +S Q G +++AR +++ + + +A+I
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
+ + ++ AR +F+ ++V W+ MI GY G A +L+ M
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 153/376 (40%), Gaps = 70/376 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVF 115
D D+ N I + + SA VF +P R+ VS+ A++S Y NG+ A ++F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 116 DQMPQRD------------------------------------------LVSWNVMISGY 133
M + D L+S N M Y
Sbjct: 211 SHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---Y 267
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWN 189
+ ++ A+ LF+ M +++ WN M+SGYA+NGYA A +F M+ K + IS
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 190 GLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A Q G +E+A ++E S +V ++L+ F K + A+ +FDR R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF 301
D V W+ MI GY + EA L+ V T+ ++ +G V E F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 302 DAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAMTCK-NVASWNTMITG-----YA 351
+ M + A + + +D A E+ + M + V W +++ +
Sbjct: 448 NLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV 507
Query: 352 QSGEITHARNLFDRMP 367
+ GE A+ LF P
Sbjct: 508 ELGEYA-AQQLFSIDP 522
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 93/199 (46%), Gaps = 8/199 (4%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S + S++ + + A L KQ+H +L+ +G + F+ L+ G + A F++
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ + WN +I GY+R+ +DAL+++ +M+ + PD T +L ACS ++ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF-EPDAATWGALLGAC 585
+ ++ G + ++ L + RL A+ + + +P E +W A++ A
Sbjct: 139 -RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA- 196
Query: 586 RLYGKTELAEKAAEVIFEM 604
Y + +A E+ M
Sbjct: 197 --YAQNGEPMEALEIFSHM 213
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/615 (38%), Positives = 360/615 (58%), Gaps = 20/615 (3%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
S N ++ Y G D A +VFD++ Q + W +I GYV N+ A +LF M
Sbjct: 34 SEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMR 93
Query: 151 KRDVVSWNTMLS--------------GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ + N +S G A G+ FD +++ N +L ++
Sbjct: 94 REPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQ------NSVLDLFM 147
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ +++ A F+ ++VSWN ++ G+ R+ A+ FDRMP R+ VSW +MI G
Sbjct: 148 RCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICG 207
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
Y + +AEAQ LF+ PVKD+ +W MVSGY+ G AR+IF MP +T SWN MI
Sbjct: 208 YVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMI 267
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
+G+ + ++ A++ F+ M KNV SW M+ GY ++G+ AR LFD+MP + ++W+
Sbjct: 268 SGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWST 327
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I GYA++G +L LF K + + + ++S C+ L ++ + + V
Sbjct: 328 MIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPS 387
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ V +L+ MY KCGS+E+A FE KD++ ++TMIA A HG G+DA+ LF+
Sbjct: 388 LLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFD 447
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M+ IKPD +T +G+L+AC+H GLV++G +YF M ++G+ P+ KHY C+VDLLGR
Sbjct: 448 KMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRV 507
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G L+EA NL++NMP P + WGALL ACR++ +LAE AA +F++EP+N+G Y+LLS
Sbjct: 508 GCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLS 567
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+YAA+GRWG V+KVR K+R+ V+K G SW+E+ + VH F +GD H + D I L
Sbjct: 568 NIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILY 627
Query: 677 ELEFKLKQDGFVYST 691
L +K G++ +
Sbjct: 628 LLCEDMKLSGYLIDS 642
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 231/501 (46%), Gaps = 80/501 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR--- 121
N + + R G D A VF+ + + ++ + ++I GY+ N Q D A +F QM +
Sbjct: 39 NKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPIS 98
Query: 122 ------------------------------------DLVSWNVMISGYVRNKSLSAARNL 145
DL+ N ++ ++R + + AR
Sbjct: 99 VLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQA 158
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
F+ M ++D+VSWN M+SGY N D AR+ FDRM E+N +SW ++ YV+ G + EA
Sbjct: 159 FDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQ 218
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+LF+S ++ SWN ++ G++ +A+ IF +MP+ D SWN MI+G+ + L
Sbjct: 219 VLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELES 278
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A+ F+ P K+V +W M+ GY++NG + AR +FD MP KN V+W+ MI GY + +
Sbjct: 279 AKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQP 338
Query: 326 DMARELFEAMTCKNVASWNTMITG------------------------------------ 349
A ELFE +++ T I G
Sbjct: 339 LKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSL 398
Query: 350 ---YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
YA+ G I A +F+ D + ++ +IA A G D++ LF +M+R + +
Sbjct: 399 IDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDS 458
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
F VL+ C + ++ G++ Q+ + G + ++ + + G +EEAY+
Sbjct: 459 VTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIR 518
Query: 466 EI-VDKDVISWNTMIAGYARH 485
+ + + W ++A H
Sbjct: 519 NMPIAPHSVVWGALLAACRVH 539
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 53/314 (16%)
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
AR L E+ + N ++ Y++ G +A +FD + Q + W ++I GY ++
Sbjct: 23 ARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQY 82
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+++ LFI+M+R + +SVL A L + G+ ++G ++K GF V N++
Sbjct: 83 DEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSV 142
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY--------ARHGFGK---------- 489
L ++ +C V+ A AF+E+ +KD++SWN MI+GY AR F +
Sbjct: 143 LDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWT 202
Query: 490 -------------DALMLFESMKTVGIKPDDITMVGILSA--CSHTGLVEKGTEYFYSMN 534
+A +LF+SM + ++ + G + C + ++
Sbjct: 203 SMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARII----------- 251
Query: 535 RDYGVIP--NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+G +P ++ + M+ +AG L+ A++ MP + +WG +L G T
Sbjct: 252 --FGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMP-NKNVISWGIMLDGYIKNGDT- 307
Query: 593 LAEKAAEVIFEMEP 606
A +F+ P
Sbjct: 308 ---NGARCLFDQMP 318
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 175/423 (41%), Gaps = 107/423 (25%)
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A+ L E + F ++ Y + G D A +FD + + N W ++I GYV+ ++
Sbjct: 23 ARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQY 82
Query: 326 DMARELFEAMTCKNVASWNTMIT-------------------------GYA--------- 351
D A LF M + ++ N I+ G+A
Sbjct: 83 DEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSV 142
Query: 352 -----QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+ ++ AR FD M + D +SW +I+GY + + + + F R ER N
Sbjct: 143 LDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFF---DRMPER-NV 198
Query: 407 SPFTSVLS------------------TCANLAS--------LELGKQLHGQLV--KVGF- 437
+TS++ +LAS +++G ++ +++ K+
Sbjct: 199 VSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIH 258
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS----------------------- 474
+ G + N ++ +CK G +E A F+ + +K+VIS
Sbjct: 259 DTGSW--NIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQ 316
Query: 475 --------WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
W+TMI GYAR+G AL LFE K IKPD+ ++GI+SACS G+++
Sbjct: 317 MPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAA 376
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
++ ++ + + +T ++D+ + G +++A + + M D + ++ A
Sbjct: 377 ESIIHNYVGP-SLLSDLRVFTSLIDMYAKCGSIEKALQMFE-MAHPKDLLCYSTMIAALA 434
Query: 587 LYG 589
+G
Sbjct: 435 NHG 437
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 271/770 (35%), Positives = 399/770 (51%), Gaps = 116/770 (15%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR--NLFEMMPKRDVVSWNT 159
++ +G L A +FDQ+P D+ ++N +I Y + +AA +L+ M R V+ N
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRM-LRHRVAPNN 125
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
+A + A R + ++ I GL A LF S A
Sbjct: 126 YTFPFALKACSALADHHCGRAIHRHAIH-AGLQAD------------LFVSTA------- 165
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN------------------ 261
L+ +VK L DA IF MP RD V+WN M+ GYA +
Sbjct: 166 --LLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR 223
Query: 262 -------------YLAEAQRLFEEAPVK--------------------DVFTWTAMVSGY 288
LA+ L + V V TA++ Y
Sbjct: 224 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMY 283
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK---------- 338
+ G + AR +FDAMP +N V+W+A+I G+V RM A LF+AM +
Sbjct: 284 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 343
Query: 339 ------------------------------NVASWNTMITGYAQSGEITHARNLFDRMPQ 368
++ + N++++ YA++G I A LFD M
Sbjct: 344 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D +S++A+++GY Q+G +E++ +F +M+ + + S++ C++LA+L+ G+
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
HG ++ G + + NAL+ MY KCG ++ + F + +D++SWNTMIAGY HG G
Sbjct: 464 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 523
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A LF M +G PD +T + +LSACSH+GLV +G +F+ M YG+ P +HY C
Sbjct: 524 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC 583
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLL R G LDEA +++MP D W ALLGACR+Y +L +K + +I E+ PE
Sbjct: 584 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 643
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G +VLLSN+Y+A+GR+ + ++VR+ + +G KK G SW+E+ +H F GD HP+
Sbjct: 644 TGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 703
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
IY L+ + +K+ G+ T VL D+ EEEKE L HSEKLA+AYGILS+ +
Sbjct: 704 PEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKT 763
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I V KNLRVC DCH IKHIS + R II+RD NRFHHF G CSCGD+W
Sbjct: 764 IFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 39/406 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY------------LLNGQ 107
D+ + +++ C A H+F +MP R V++NAM++GY LL+ Q
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 218
Query: 108 LDPAR---------QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+ R + + Q+ ++ + Y L RN + V+
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD-GVLLGT 277
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--KANWEV 216
+L YA+ G ARR+FD M +NE++W+ L+ +V R+ +A +LF++
Sbjct: 278 ALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 337
Query: 217 VSWNSLMGGF-----VKQKRLGDA-KWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRL 269
+S S+ + R+G+ + + V D + N++++ YA+ + +A L
Sbjct: 338 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 397
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRM 325
F+E VKD +++A+VSGYVQNG+ +EA ++F M E + + ++I +
Sbjct: 398 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 457
Query: 326 DMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
R ++ + +AS N +I YA+ G I +R +F+ MP D +SW +IAGY
Sbjct: 458 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 517
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
G +++ LF+EM G + F +LS C++ + GK
Sbjct: 518 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 563
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 142/356 (39%), Gaps = 107/356 (30%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY--------NAMISGYLLNGQLDPARQ 113
+Q +A T + C + LH P R+S S A++ Y G L AR+
Sbjct: 240 QQGALAQGTSVHAYCIRACLH-----PNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 294
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--------------------- 152
VFD MP R+ V+W+ +I G+V ++ A LF+ M +
Sbjct: 295 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 354
Query: 153 -------------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
D+ + N++LS YA+ G D A +FD M K+ +S++ L++
Sbjct: 355 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 414
Query: 194 AYVQNGRIEEACMLFESKANWEV-------VSW--------------------------- 219
YVQNGR EEA ++F+ V VS
Sbjct: 415 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 474
Query: 220 -----NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-- 272
N+L+ + K R+ ++ +F+ MP RD VSWNTMI GY + EA LF E
Sbjct: 475 ETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMN 534
Query: 273 --APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
D T+ ++S +G V E + F M GY T RM+
Sbjct: 535 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGH-----------GYGLTPRME 579
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 132/321 (41%), Gaps = 77/321 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N ++ + + G D A+ +F+ M + +VSY+A++SGY+ NG+ + A VF +M
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433
Query: 120 Q-----------------------------------RDLVS----WNVMISGYVRNKSLS 140
R L S N +I Y + +
Sbjct: 434 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 493
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
+R +F MMP RD+VSWNTM++GY +G A +F M + +++ LL+A
Sbjct: 494 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 553
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMG-GFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+G ++ E K W +MG G+ R+ + M+
Sbjct: 554 HSG------LVIEGK------HWFHVMGHGYGLTPRMEH---------------YICMVD 586
Query: 256 GYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVD----EARMIFDAMPEKNTV 310
++ +L EA + P++ DV W A++ +D +RMI + PE T
Sbjct: 587 LLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE-GTG 645
Query: 311 SWNAMIAGYVQTKRMDMAREL 331
++ + Y R D A E+
Sbjct: 646 NFVLLSNIYSAAGRFDEAAEV 666
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/641 (39%), Positives = 387/641 (60%), Gaps = 27/641 (4%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y G L+ AR+VFD M QR+ SWN ++ + +L A NLF+ MP+RD
Sbjct: 58 NRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQC 117
Query: 156 SWNTMLSGYAQ-NGYADAARRIFDRMLEK---NEISWNGLLAAYVQ----NGRIEEACML 207
SWN M+SG+AQ + + +A R + D E NE S+ L+A + ++ ++
Sbjct: 118 SWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLI 177
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S+ + +V ++L+ + K + + A+ FD M VR+ VSWN++IT Y QN +A
Sbjct: 178 AKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKAL 237
Query: 268 RLF----------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
+F +E + V + A +S ++ G AR++ + V NA++
Sbjct: 238 EVFVRMMNCGIEPDEITLASVASACASLSA-IREGLQIHARVMKHDKYRNDLVLGNALVD 296
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + +R++ AR +F+ M ++V S +M++GYA++ + AR +F M + + +SW A+
Sbjct: 297 MYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNAL 356
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IAGY Q+G +E+++RLF+ +KR F ++L+ CANLA L+LG+Q H ++K GF
Sbjct: 357 IAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGF 416
Query: 438 ------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
++ FVGN+L+ MY KCG VE+ FE ++++D +SWN MI GYA++G+G +A
Sbjct: 417 WFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEA 476
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L +F M G +PD +TM+G+LSACSH GLVE+G YF SM ++G++P HYTCMVD
Sbjct: 477 LEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVD 536
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG LDEA NL++ MP EPDA WG+LL AC+++G L + AE + E++P N+G
Sbjct: 537 LLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGP 596
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVLLSN+YA GRW DV +VR +MR GV K G SW+ +Q+ +H F V D HP K I
Sbjct: 597 YVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDI 656
Query: 672 YAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
Y L+ L ++K+ G+V + EEE + L HSE
Sbjct: 657 YLILKILTEQMKRVGYVPEAD--DDEPYEEESDSELILHSE 695
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 234/492 (47%), Gaps = 74/492 (15%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN + + G D AL++F MP R S+NAM+SG+ + + A + M D
Sbjct: 88 WNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDF 147
Query: 124 V-------------------SWNVMISG--------------------YVRNKSLSAARN 144
V S V I G Y + + +++A+
Sbjct: 148 VLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQR 207
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGR 200
F+ M R++VSWN++++ Y QNG A A +F RM +E +EI+ + +A
Sbjct: 208 AFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSA 267
Query: 201 IEE-----ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
I E A ++ K ++V N+L+ + K +R+ +A+ +FDRMP+RD VS +M++
Sbjct: 268 IREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVS 327
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VS 311
GYA+ + + A+ +F ++V +W A+++GY QNG+ +EA +F + ++ +
Sbjct: 328 GYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYT 387
Query: 312 WNAMIAGYVQTKRMDMAREL----------FEAMTCKNVASWNTMITGYAQSGEITHARN 361
+ ++ + + R+ F++ ++ N++I Y + G + R
Sbjct: 388 FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRL 447
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+F+RM + D +SW A+I GYAQ+GY ++L +F EM GER + VLS C++
Sbjct: 448 VFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGL 507
Query: 422 LELGK------QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVIS 474
+E G+ + LV V C V + + G ++EA + + + ++ D +
Sbjct: 508 VEEGRCYFQSMTIEHGLVPVKDHYTCMVD-----LLGRAGCLDEANNLIQTMPMEPDAVV 562
Query: 475 WNTMIAGYARHG 486
W +++A HG
Sbjct: 563 WGSLLAACKVHG 574
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 191/418 (45%), Gaps = 78/418 (18%)
Query: 58 DWDIR---QWNVAITTHMRNGCCDSALHVFNSMP-------------------------- 88
D D+R WN IT + +NG AL VF M
Sbjct: 211 DMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIRE 270
Query: 89 --------------RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV 134
R V NA++ Y +++ AR VFD+MP RD+VS M+SGY
Sbjct: 271 GLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYA 330
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW------ 188
+ S+ AAR +F M +R+VVSWN +++GY QNG + A R+F +L K E W
Sbjct: 331 KASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLF--LLLKRESIWPTHYTF 388
Query: 189 -NGLLA----AYVQNGRIEEACML-----FESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
N L A A ++ GR +L F+S + ++ NSL+ ++K + D + +
Sbjct: 389 GNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLV 448
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKV 294
F+RM RD VSWN MI GYAQN Y EA +F E V D T ++S G V
Sbjct: 449 FERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLV 508
Query: 295 DEARMIFDAM-------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTM 346
+E R F +M P K+ + M+ + +D A L + M + + W ++
Sbjct: 509 EEGRCYFQSMTIEHGLVPVKD--HYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSL 566
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCIS---WAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+ G IT + + +R+ + D ++ + + YA+ G +D +R+ +M++ G
Sbjct: 567 LAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMG 624
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 216/466 (46%), Gaps = 66/466 (14%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ +++ + E+ N L+ + K L DA+ +FD M R+ SWN ++ + L EA
Sbjct: 45 IIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEA 104
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-RMIFDAMPEK---NTVSWNAMIAGYVQT 322
LF+ P +D +W AMVSG+ Q + +EA R + D E N S+ + ++
Sbjct: 105 LNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGL 164
Query: 323 KRMDMARELF----EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ + ++ ++ +V + ++ Y++ + A+ FD M + +SW ++I
Sbjct: 165 MDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLI 224
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-F 437
Y Q+G + +L +F+ M G + SV S CA+L+++ G Q+H +++K +
Sbjct: 225 TCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKY 284
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEE------------------------------- 466
+GNAL+ MY KC V EA F+
Sbjct: 285 RNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSN 344
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC--------- 517
+++++V+SWN +IAGY ++G ++A+ LF +K I P T +L+AC
Sbjct: 345 MMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLG 404
Query: 518 --SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
+HT +++ G +++ D + + ++D+ + G +++ + + + M E D
Sbjct: 405 RQAHTHILKHG--FWFKSGEDSDIFVGNS----LIDMYMKCGLVEDGRLVFERM-LERDN 457
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+W A++ Y + +A E+ EM P++ M +LS
Sbjct: 458 VSWNAMIVG---YAQNGYGTEALEIFREMLVSGERPDHVTMIGVLS 500
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 15/243 (6%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L+ SPF +L TC S+ + +H +++K F + F+ N L+ +Y KCG +E+A
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+ + ++ SWN ++ + G +AL LF+ M + D + ++S +
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMP----ERDQCSWNAMVSGFAQRDRF 132
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD-----EAQNLMKNMPFEPDAATW 578
E+ + M+ + V+ Y+ L AG +D + L+ + D
Sbjct: 133 EEALRFVVDMHSEDFVL---NEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMG 189
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
AL+ +Y K + A +M+ N + L Y +G G +V ++M +
Sbjct: 190 SALVD---MYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNC 246
Query: 639 GVK 641
G++
Sbjct: 247 GIE 249
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D DI N I +M+ G + VF M R +VS+NAMI GY NG A +
Sbjct: 419 KSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALE 478
Query: 114 VFDQM----PQRDLVSWNVMISGYVRNKSLSAARNLFEMM-------PKRDVVSWNTMLS 162
+F +M + D V+ ++S + R F+ M P +D + M+
Sbjct: 479 IFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKD--HYTCMVD 536
Query: 163 GYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRI 201
+ G D A + M +E + + W LLAA +G I
Sbjct: 537 LLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNI 576
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 269/752 (35%), Positives = 390/752 (51%), Gaps = 102/752 (13%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G L AR VFDQ + N MI+G++RN+ LF MM D+ N+ +A
Sbjct: 93 GFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDI-EINSYTCMFA 151
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
D L +E+ ++ A V+ G + + +S++
Sbjct: 152 LKACTD---------LLDDEVGME-IIRAAVRRG------------FHLHLYVGSSMVNF 189
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------APV-- 275
VK+ L DA+ +FD MP +D V WN++I GY Q E+ ++F E +PV
Sbjct: 190 LVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTM 249
Query: 276 -----------------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
DVF T++V Y G A ++FD+M
Sbjct: 250 ANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCS 309
Query: 307 KNTVSWNAMIAGYVQ-----------------------------------TKRMDMAREL 331
++ +SWNAMI+GYVQ T ++ R L
Sbjct: 310 RSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRIL 369
Query: 332 FEAMTCKNVASWNTMITG----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ K + S + T Y++ G I A +F RM + + I+W A++ G +Q+GY+
Sbjct: 370 HSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYA 429
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
ED+L+LF +M+ N S++ CA+L SL G+ +H ++ G+ + +AL
Sbjct: 430 EDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSAL 489
Query: 448 LVMYCKCGSVEEAYHAFE-EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+ MY KCG + A F E KDVI N+MI GY HG G+ AL ++ M +KP+
Sbjct: 490 IDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPN 549
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
T V +L+ACSH+GLVE+G F+SM RD+ V P KHY C+VDL RAGRL+EA L+
Sbjct: 550 QTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELV 609
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
K MPF+P ALL CR + T + + A+ + ++ N+G+YV+LSN+YA + +W
Sbjct: 610 KQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWE 669
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
V+ +R MR +G+KK+ GYS +EV NKV+TF D HP IY LE L +++ +G
Sbjct: 670 SVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEG 729
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
++ T VL DV E K +L HSE+LA+A+G+LS P G I++ KNLRVC DCHN K
Sbjct: 730 YIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTK 789
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ISKIV R II+RD NRFHHF G CSC D+W
Sbjct: 790 YISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 181/384 (47%), Gaps = 29/384 (7%)
Query: 72 MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMIS 131
++ G A VF+ MP + V +N++I GY+ G + Q+F +M L V ++
Sbjct: 191 VKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMA 250
Query: 132 GY--------VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
++ + A + + DV +++ Y+ G +A +FD M +
Sbjct: 251 NLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSR 310
Query: 184 NEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
+ ISWN +++ YVQNG I E+ LF +S + ++ + SL+ G + L + + I
Sbjct: 311 SLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGR-IL 369
Query: 240 DRMPVRDEVSWNTMITG-----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
+R E+ + +++ Y++ + +A +F K+V TWTAM+ G QNG
Sbjct: 370 HSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYA 429
Query: 295 DEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG- 349
++A +F M E+ N+V+ +++ + R + A ++ +++ +IT
Sbjct: 430 EDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTV-HAHFIRHGYAFDAVITSA 488
Query: 350 ----YAQSGEITHARNLF-DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
YA+ G+I A LF + D I ++I GY G+ +L ++ M +
Sbjct: 489 LIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKP 548
Query: 405 NRSPFTSVLSTCANLASLELGKQL 428
N++ F S+L+ C++ +E GK L
Sbjct: 549 NQTTFVSLLTACSHSGLVEEGKAL 572
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I Y+ G + HARN+FD+ + A+IAG+ ++ + RLF M +N
Sbjct: 85 LIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEIN 144
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
L C +L E+G ++ V+ GF +VG++++ K G + +A F+
Sbjct: 145 SYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFD 204
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ +KDV+ WN++I GY + G +++ +F M G++P +TM +L AC +GL +
Sbjct: 205 GMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKV 264
Query: 526 G 526
G
Sbjct: 265 G 265
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 404 LNRSP--FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
N++P F+S+L +N +L K +H Q++K F+ L+ +Y G + A
Sbjct: 42 FNQAPSVFSSLLHQFSN--TLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHAR 99
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
+ F++ + N MIAG+ R+ + LF M + I+ + T + L AC+
Sbjct: 100 NVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLL 159
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
E G E + R G + + MV+ L + G L +AQ + MP E D W ++
Sbjct: 160 DDEVGMEIIRAAVRR-GFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMP-EKDVVCWNSI 217
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMY---VLLSNLYAASGRWG 626
+G Y + L ++ ++ EM G+ V ++NL A G+ G
Sbjct: 218 IGG---YVQKGLFWESIQMFLEM--IGGGLRPSPVTMANLLKACGQSG 260
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------ 121
+ + + G A VF M +++ +++ AM+ G NG + A ++F QM +
Sbjct: 389 VDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANS 448
Query: 122 ---------------------------------DLVSWNVMISGYVRNKSLSAARNLF-E 147
D V + +I Y + + +A LF
Sbjct: 449 VTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNN 508
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEE 203
+DV+ N+M+ GY +G+ A ++ RM+E+ N+ ++ LL A +G +EE
Sbjct: 509 EFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEE 568
Query: 204 ACMLFESKANWEVV-----SWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
LF S V + L+ + RL +A + +MP +
Sbjct: 569 GKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQ 615
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 271/770 (35%), Positives = 399/770 (51%), Gaps = 116/770 (15%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR--NLFEMMPKRDVVSWNT 159
++ +G L A +FDQ+P D+ ++N +I Y + +AA +L+ M R V+ N
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRM-LRHRVAPNN 125
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
+A + A R + ++ I GL A LF S A
Sbjct: 126 YTFPFALKACSALADHHCGRAIHRHAIH-AGLQAD------------LFVSTA------- 165
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN------------------ 261
L+ +VK L DA IF MP RD V+WN M+ GYA +
Sbjct: 166 --LLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR 223
Query: 262 -------------YLAEAQRLFEEAPVK--------------------DVFTWTAMVSGY 288
LA+ L + V V TA++ Y
Sbjct: 224 LRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMY 283
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK---------- 338
+ G + AR +FDAMP +N V+W+A+I G+V RM A LF+AM +
Sbjct: 284 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 343
Query: 339 ------------------------------NVASWNTMITGYAQSGEITHARNLFDRMPQ 368
++ + N++++ YA++G I A LFD M
Sbjct: 344 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D +S++A+++GY Q+G +E++ +F +M+ + + S++ C++LA+L+ G+
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
HG ++ G + + NAL+ MY KCG ++ + F + +D++SWNTMIAGY HG G
Sbjct: 464 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 523
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A LF M +G PD +T + +LSACSH+GLV +G +F+ M YG+ P +HY C
Sbjct: 524 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYIC 583
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLL R G LDEA +++MP D W ALLGACR+Y +L +K + +I E+ PE
Sbjct: 584 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 643
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G +VLLSN+Y+A+GR+ + ++VR+ + +G KK G SW+E+ +H F GD HP+
Sbjct: 644 TGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 703
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
IY L+ + +K+ G+ T VL D+ EEEKE L HSEKLA+AYGILS+ +
Sbjct: 704 PEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKT 763
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I V KNLRVC DCH IKHIS + R II+RD NRFHHF G CSCGD+W
Sbjct: 764 IFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 191/406 (47%), Gaps = 39/406 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY------------LLNGQ 107
D+ + +++ C A H+F +MP R V++NAM++GY LL+ Q
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 218
Query: 108 LDPAR---------QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+ R + + Q+ ++ + Y L + RN + V+
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTD-GVLLGT 277
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--KANWEV 216
+L YA+ G ARR+FD M +NE++W+ L+ +V R+ +A +LF++
Sbjct: 278 ALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 337
Query: 217 VSWNSLMGGF-----VKQKRLGDA-KWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRL 269
+S S+ + R+G+ + + V D + N++++ YA+ + +A L
Sbjct: 338 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 397
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRM 325
F+E VKD +++A+VSGYVQNG+ +EA ++F M E + + ++I +
Sbjct: 398 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 457
Query: 326 DMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
R ++ + +AS N +I YA+ G I +R +F+ MP D +SW +IAGY
Sbjct: 458 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 517
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
G +++ LF+EM G + F +LS C++ + GK
Sbjct: 518 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 563
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 136/305 (44%), Gaps = 66/305 (21%)
Query: 77 CDSALH---VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL--VSWNVMIS 131
C S L+ VF++MP R+ V+++A+I G++L ++ A +F M + L +S + S
Sbjct: 286 CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 345
Query: 132 GYVRNKSLSAAR---NLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
SL R L ++ K D+ + N++LS YA+ G D A +FD M K+
Sbjct: 346 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 405
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEV-------VSW------------------ 219
+S++ L++ YVQNGR EEA ++F+ V VS
Sbjct: 406 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 465
Query: 220 --------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
N+L+ + K R+ ++ +F+ MP RD VSWNTMI GY + E
Sbjct: 466 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 525
Query: 266 AQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
A LF E D T+ ++S +G V E + F M GY
Sbjct: 526 ATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRH-----------GYGL 574
Query: 322 TKRMD 326
T RM+
Sbjct: 575 TPRME 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 75/320 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N ++ + + G D A+ +F+ M + +VSY+A++SGY+ NG+ + A VF +M
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433
Query: 120 Q-----------------------------------RDLVS----WNVMISGYVRNKSLS 140
R L S N +I Y + +
Sbjct: 434 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 493
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
+R +F MMP RD+VSWNTM++GY +G A +F M + +++ LL+A
Sbjct: 494 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 553
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+G + E +W ++ + G+ R+ + M+
Sbjct: 554 HSGLVIEG-------KHW----FHVMRHGYGLTPRMEH---------------YICMVDL 587
Query: 257 YAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVD----EARMIFDAMPEKNTVS 311
++ +L EA + P++ DV W A++ +D +RMI + PE T +
Sbjct: 588 LSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE-GTGN 646
Query: 312 WNAMIAGYVQTKRMDMAREL 331
+ + Y R D A E+
Sbjct: 647 FVLLSNIYSAAGRFDEAAEV 666
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/537 (42%), Positives = 340/537 (63%), Gaps = 1/537 (0%)
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR-IEEACM 206
M+ R +V N ++ A+ G AARR+FD M ++ +SWN LL A + GR + A
Sbjct: 1 MLATRLLVRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARR 60
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
LF+ + V+SWNS++ G + L A F R P R+ SWN M+ G + + +A
Sbjct: 61 LFDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDA 120
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
LF E P ++V ++T MV G + G+V AR +FDAMPE+N VSW AMI GYV+ D
Sbjct: 121 WALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFD 180
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
AR+LFEAM KNV + MITGY + G++ AR LFD +P D ISW A+I GY +G+
Sbjct: 181 EARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHNGH 240
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E++++L I M R G + + + ++L+ C+ LA L G+ H K E+ NA
Sbjct: 241 GEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRSTHAVATKTMLESSTSFCNA 300
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG+V E+ F + +D++SWNT+IA YA+HG + A+ LF M+T G+ P+
Sbjct: 301 LMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLIPN 360
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
DIT++ +LSAC H G V E F M+ Y + P+++HY C+VD+LGRAG+L++A + +
Sbjct: 361 DITILSMLSACGHVGRVNDSLELFDLMSSKYAISPSAEHYACVVDILGRAGQLEKACSYI 420
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
K MPFE + WGALLGA + +G +L E AA+++ + + ++G YV+LSN+YAA+G WG
Sbjct: 421 KKMPFEAERNVWGALLGASKTHGNVQLGELAAKMLVQSDSVSSGPYVMLSNIYAAAGMWG 480
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+V++VR +M+++GVKK GYSW E+ NKV+ F GD HPE ++I + L ++ F ++
Sbjct: 481 EVNRVRGQMKEKGVKKQPGYSWTEIANKVNMFVGGDASHPEMNKIISELRKISFHMQ 537
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 200/382 (52%), Gaps = 44/382 (11%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR-NKSLSAARNL 145
+ R V N I+ G + AR+VFD MP+RD+VSWN +++ R + L AAR L
Sbjct: 2 LATRLLVRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRL 61
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
F+ MP R+V+SWN++++G +G DAA F R +N SWN +LA V+ GR+++A
Sbjct: 62 FDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAW 121
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
LF VVS+ +++ G ++ + A+ +FD MP R+ VSW MITGY +N E
Sbjct: 122 ALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFDE 181
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A++LFE P K+V TAM++GY ++G V+ AR +FD +P K+ +SWNAMI GYV
Sbjct: 182 ARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHNGHG 241
Query: 326 DMARELFEAM-----------------TCKNVASW----------------------NTM 346
+ A +L M C +A N +
Sbjct: 242 EEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRSTHAVATKTMLESSTSFCNAL 301
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+T Y++ G + + +F + D +SW IIA YAQ G + ++ LF EM+ G N
Sbjct: 302 MTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLIPND 361
Query: 407 SPFTSVLSTCANLA----SLEL 424
S+LS C ++ SLEL
Sbjct: 362 ITILSMLSACGHVGRVNDSLEL 383
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 219/430 (50%), Gaps = 19/430 (4%)
Query: 60 DIRQWNVAITTHMRNG-CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
D+ WN +T R G +A +F+ MP R+ +S+N++++G L +G LD A F +
Sbjct: 37 DVVSWNALLTALWRAGRDLPAARRLFDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARA 96
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P+R++ SWN M++G VR + A LF MP+R+VVS+ TM+ G A+ G AR +FD
Sbjct: 97 PRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFD 156
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
M E+N +SW ++ YV+N +EA LFE+ + VV+ +++ G+ K + A+ +
Sbjct: 157 AMPERNLVSWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARRL 216
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVS-----GYV 289
FD +PV+D +SWN MITGY N + EA +L F E D T A+++ +
Sbjct: 217 FDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSALALL 276
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+ G+ A + M E +T NA++ Y + + + +F + +++ SWNT+I
Sbjct: 277 RQGRSTHA-VATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAA 335
Query: 350 YAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERL 404
YAQ G+ A LF M I+ ++++ G DSL LF M +Y
Sbjct: 336 YAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYAISP 395
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ + V+ LE + + K+ FEA V ALL G+V+ A
Sbjct: 396 SAEHYACVVDILGRAGQLE---KACSYIKKMPFEAERNVWGALLGASKTHGNVQLGELAA 452
Query: 465 EEIVDKDVIS 474
+ +V D +S
Sbjct: 453 KMLVQSDSVS 462
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/623 (39%), Positives = 357/623 (57%), Gaps = 58/623 (9%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
M++ YA +G D++ +F+ + E + + +N ++ AY + G E + S +W
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSW----- 165
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
GF GD + ++ V ++ G + + F D++
Sbjct: 166 -----GFT-----GD--YFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQF------DLY 207
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
T+++ Y + G++++A +FD M T ++
Sbjct: 208 VATSLIILYGKCGEINDAGKVFDNM-------------------------------TIRD 236
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
V+SWN ++ GY +SG I A +F+RMP + +SW +I+GY+QSG ++ +L LF EM +
Sbjct: 237 VSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVK 296
Query: 400 --YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
G R N SVL CA L++LE G+Q+H ++G + V AL MY KCGS+
Sbjct: 297 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSL 356
Query: 458 EEAYHAFEEIV--DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+A + F+++ +K++I+WNTMI YA +G G A+ F M GI+PDDIT G+LS
Sbjct: 357 VDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLS 416
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
CSH+GLV+ G +YF M+ Y + P +HY C+ DLLGRAGRL EA L+ MP
Sbjct: 417 GCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGP 476
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
+ WG+LL ACR + E+AE AA +F +EPEN G YVLLSN+YA +GRW +V K+R +
Sbjct: 477 SIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIV 536
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+ +G KK G SW+E+ K H F GDT HP+ IY +LE L K+K G+ T VL
Sbjct: 537 KSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVL 596
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HD+ EEEKE L HSEKLAVA+GIL+ PA +RV KNLR+C DCH A+ IS+I GR
Sbjct: 597 HDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGRE 656
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
+I+RD NRFHHF GG CSCGDYW
Sbjct: 657 VIVRDINRFHHFKGGCCSCGDYW 679
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 162/332 (48%), Gaps = 35/332 (10%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G+++ A +VFD M RD+ SWN +++GY ++ + AA +FE MP R++VSW TM+SGY+
Sbjct: 220 GEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYS 279
Query: 166 QNGYADAARRIFDRMLEK------NEISWNGLLAAYVQNGRIEEACMLFESKA----NWE 215
Q+G A A +FD M+++ N ++ +L A Q +E + E N
Sbjct: 280 QSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSN 339
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE---VSWNTMITGYAQNNYLAEAQRLFEE 272
+L + K L DA+ FD++ R+E ++WNTMIT YA + +A F E
Sbjct: 340 ASVLIALTAMYAKCGSLVDARNCFDKLN-RNEKNLIAWNTMITAYASYGHGLQAVSTFRE 398
Query: 273 ---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV-------Q 321
A ++ D T+T ++SG +G VD F+ M T S N + Y +
Sbjct: 399 MIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM--STTYSINPRVEHYACVADLLGR 456
Query: 322 TKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEI----THARNLFDRMPQHDCISWAA 376
R+ A +L M S W +++ + + T AR LF P++ ++
Sbjct: 457 AGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTG-NYVL 515
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ YA++G ++ +L +K G + +SP
Sbjct: 516 LSNMYAEAGRWQEVDKLRAIVKSQGTK--KSP 545
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 157/378 (41%), Gaps = 69/378 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-------- 119
+ + +G DS++ VFN + SS+ +N+MI Y G + + M
Sbjct: 112 VAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDY 171
Query: 120 -------------------------------QRDLVSWNVMISGYVRNKSLSAARNLFEM 148
Q DL +I Y + ++ A +F+
Sbjct: 172 FTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDN 231
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
M RDV SWN +L+GY ++G DAA IF+RM +N +SW +++ Y Q+G ++A LF
Sbjct: 232 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 291
Query: 209 ES--------KANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVRDEVSWNTMITG- 256
+ + NW V+ S++ + L + I + RM + S +T
Sbjct: 292 DEMVKEDSGVRPNW--VTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349
Query: 257 YAQNNYLAEAQRLFEEA--PVKDVFTWTAMVSGYVQNG----KVDEARMIFDAMPEKNTV 310
YA+ L +A+ F++ K++ W M++ Y G V R + A + + +
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 409
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA-------QSGEITHARNLF 363
++ +++G + +D+ + F M+ S N + YA ++G + A L
Sbjct: 410 TFTGLLSGCSHSGLVDVGLKYFNHMS--TTYSINPRVEHYACVADLLGRAGRLAEASKLV 467
Query: 364 DRMPQHDCIS-WAAIIAG 380
MP S W +++A
Sbjct: 468 GEMPMPAGPSIWGSLLAA 485
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 134/318 (42%), Gaps = 69/318 (21%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN + + ++GC D+AL +F MP R+ VS+ MISGY +G A +FD+M
Sbjct: 236 DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMV 295
Query: 120 QRD--------------------------------------------LVSWNVMISGYVR 135
+ D L++ M Y +
Sbjct: 296 KEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM---YAK 352
Query: 136 NKSLSAARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWN 189
SL ARN F+ + + +++++WNTM++ YA G+ A F M ++ ++I++
Sbjct: 353 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 412
Query: 190 GLLAAYVQNGRIEEACMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
GLL+ +G ++ F + N V + + + RL +A + MP+
Sbjct: 413 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 472
Query: 245 RDEVS-WNTMITGYAQNNYL----AEAQRLFEEAPVKDVFTWTAMVSGYVQNGK---VDE 296
S W +++ ++ L A++LF P ++ + + + Y + G+ VD+
Sbjct: 473 PAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEP-ENTGNYVLLSNMYAEAGRWQEVDK 531
Query: 297 ARMIFDAMPEKNT--VSW 312
R I + K + SW
Sbjct: 532 LRAIVKSQGTKKSPGCSW 549
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ V L L+LG Q+H ++ G + VG+ ++ Y G ++ + F I
Sbjct: 73 YAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIG 132
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA-----------C 517
+ + +N+MI YAR+GF + + + SM + G D T +L + C
Sbjct: 133 EPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKC 192
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
H ++ G ++ D V T ++ L G+ G +++A + NM D ++
Sbjct: 193 VHGLILRIGLQF------DLYVA------TSLIILYGKCGEINDAGKVFDNMTIR-DVSS 239
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEP-ENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W ALL Y K+ + AA IFE P N + + + Y+ SG +++ L +
Sbjct: 240 WNALLAG---YTKSGCID-AALAIFERMPWRNIVSWTTMISGYSQSG----LAQQALSLF 291
Query: 637 DRGVKKVTGY--SWLEVQN 653
D VK+ +G +W+ + +
Sbjct: 292 DEMVKEDSGVRPNWVTIMS 310
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/632 (38%), Positives = 359/632 (56%), Gaps = 42/632 (6%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N L+ Y G + A +FE ++VSWN+L+ G+V+ + +A+ +F+ MP R+ +
Sbjct: 144 NTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTI 203
Query: 249 SWNTMITGYAQNNYLAEAQRLFE--EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP- 305
+ N+MI + + + +A+R+F +D+ +W+AMVS Y QN +EA ++F M
Sbjct: 204 ASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKG 263
Query: 306 --------------------------------------EKNTVSWNAMIAGYVQTKRMDM 327
E NA+I Y +
Sbjct: 264 SGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVD 323
Query: 328 ARELFE-AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
AR +F+ ++ SWN+MI+GY + G I A LF MP+ D +SW+A+I+GYAQ
Sbjct: 324 ARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHEC 383
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
++L LF EM+ +G R + + S +S C +LA+L+LGK +H + + + +
Sbjct: 384 FSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTT 443
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG VE A F + +K V +WN +I G A +G + +L +F MK G P+
Sbjct: 444 LIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPN 503
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+IT +G+L AC H GLV G YF SM ++ + N KHY CMVDLLGRAG L EA+ L+
Sbjct: 504 EITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELI 563
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+MP PD ATWGALLGACR + E+ E+ + +++P++ G +VLLSN+YA+ G WG
Sbjct: 564 DSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWG 623
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+V ++R M GV K G S +E VH F GD HP+ + I L+ + KLK +G
Sbjct: 624 NVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEG 683
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V +T V D+ EEEKE L HSEKLAVA+G+++I PIRV KNLR+C DCH +K
Sbjct: 684 YVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVK 743
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISK R I++RD +RFHHF G+CSC D+W
Sbjct: 744 LISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 226/446 (50%), Gaps = 60/446 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y + G + AR+VF++ P DLVSWN +++GYV+ + A +FE MP+R+ +
Sbjct: 144 NTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTI 203
Query: 156 SWNTMLSGYAQNGYADAARRIFD--RMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKA 212
+ N+M++ + + G + ARRIF+ R E++ +SW+ +++ Y QN EEA +LF E K
Sbjct: 204 ASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKG 263
Query: 213 NWEVVSWNSLMGGFVKQKRLGD---AKWIFD---RMPVRDEVSW-NTMITGYAQNNYLAE 265
+ V ++ R+ + +W+ ++ V D VS N +I Y+ + +
Sbjct: 264 SGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVD 323
Query: 266 AQRLFEE-APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
A+R+F++ + D+ +W +M+SGY++ G + +A M+F +MPEK+ VSW+AMI+GY Q +
Sbjct: 324 ARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHEC 383
Query: 325 MDMARELFEAM-----------------TCKNVASWN----------------------T 345
A LF+ M C ++A+ + T
Sbjct: 384 FSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTT 443
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I Y + G + +A +F M + +W A+I G A +G E SL +F +MK+ G N
Sbjct: 444 LIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPN 503
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
F VL C ++ + G+ ++ + EA ++ + + G ++EA
Sbjct: 504 EITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEA---- 559
Query: 465 EEIVDK-----DVISWNTMIAGYARH 485
EE++D DV +W ++ +H
Sbjct: 560 EELIDSMPMAPDVATWGALLGACRKH 585
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 49/242 (20%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-- 150
+S+N+MISGYL G + A +F MP++D+VSW+ MISGY +++ S A LF+ M
Sbjct: 338 ISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLH 397
Query: 151 -------------------------------------KRDVVSWNTMLSGYAQNGYADAA 173
+ +V+ T++ Y + G + A
Sbjct: 398 GVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENA 457
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFVKQKRL 232
+F M EK +WN ++ NG +E++ +F + K V + + MG + +
Sbjct: 458 LEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHM 517
Query: 233 G---DAKWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEAPV-KDVFTWTA 283
G D + F+ M ++ N M+ + L EA+ L + P+ DV TW A
Sbjct: 518 GLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGA 577
Query: 284 MV 285
++
Sbjct: 578 LL 579
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 53/288 (18%)
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
QT + + + A N +S +T + + S I F+ + + +W I+
Sbjct: 25 QTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRI------FNHLRNPNTFTWNTIMRA 78
Query: 381 --YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
Y Q+ + L + + + + + + +L CA S G+QLH V GF+
Sbjct: 79 HLYLQNSPHQALLHYKLFLASHA-KPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFD 137
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+V N L+ +Y CGSV A FEE D++SWNT++AGY + G ++A +FE
Sbjct: 138 GDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFE-- 195
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+ E+ T + NS M+ L GR G
Sbjct: 196 ----------------------GMPERNT-----------IASNS-----MIALFGRKGC 217
Query: 559 LDEAQNLMKNM-PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+++A+ + + E D +W A++ Y + E+ E+A + EM+
Sbjct: 218 VEKARRIFNGVRGRERDMVSWSAMVSC---YEQNEMGEEALVLFVEMK 262
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/651 (37%), Positives = 368/651 (56%), Gaps = 46/651 (7%)
Query: 174 RRIFDRMLEKNEISWNGLLAAYV---QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
R + R N S + L A + G +++A F S E ++ L+ + +
Sbjct: 7 RPLTRRHFSTNPSSGSELTAEFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISEN 66
Query: 231 RLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
L K + + D+ N ++ Y++ L A LF P K++ + +++
Sbjct: 67 SLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILIN 126
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----------- 335
GY ++G AR +FD MPE+N +WNAM+AG +Q + + LF M
Sbjct: 127 GYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFA 186
Query: 336 ---TCKNVASWNTMITG-------------------------YAQSGEITHARNLFDRMP 367
+ A ++ G Y + G + L MP
Sbjct: 187 LGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMP 246
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ ++W +IAG AQ+GY E+ L + MK G R ++ F SV+S+C+ LA+L G+Q
Sbjct: 247 SQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQ 306
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
+H +++K G V ++L+ MY +CG +E + F E + DV+ W++MIA Y HG
Sbjct: 307 IHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGR 366
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
G +A+ LF M+ ++ +D+T + +L ACSH GL EKG ++F M YGV P +HYT
Sbjct: 367 GVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYT 426
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
CMVDLLGR G ++EA+ L+++MP + D TW LL AC+++ KTE+A + +E +F ++P
Sbjct: 427 CMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPR 486
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
+ YVLLSN++A+ RW DVS VR MRDR +KK G SWLEV+N++H F +GD HP+
Sbjct: 487 DPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPK 546
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
I +YL EL ++K+ G+V VLHD+ E+KE+ L +HSEKLA+A+ +L P G
Sbjct: 547 SVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGT 606
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PIRV+KNLRVC DCH AIK+IS+I R II+RD++RFHHF G CSCGDYW
Sbjct: 607 PIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 224/482 (46%), Gaps = 56/482 (11%)
Query: 31 NTNPYPSKKTLKRHLNSKSRNKPKPAGD-WDIRQWN-VAITTHMRNGCC-DSALHV---F 84
+TNP + N S+ K A D + W+ ++ +H+ C +++L +
Sbjct: 15 STNPSSGSELTAEFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQL 74
Query: 85 NSMPRRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
+S+ S S + IS +LLN GQLD A +F MP+++++S N++I+GY R+
Sbjct: 75 HSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDW 134
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
AR +F+ MP+R+V +WN M++G Q + + +F RM NE+ G L G
Sbjct: 135 VTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRM---NEL---GFLPDEFALG 188
Query: 200 RIEEACMLFES------------KANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+ C + K +E +V +SL ++K LG+ + + MP +
Sbjct: 189 SVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQ 248
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ V+WNT+I G AQN Y E V D + M +G+ D +
Sbjct: 249 NVVAWNTLIAGRAQNGYPEE---------VLDQYNMMKM-AGFRP-----------DKIT 287
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+ +S + +A Q +++ E+ +A V+ +++I+ Y++ G + ++ +F
Sbjct: 288 FVSVISSCSELATLGQGQQIHA--EVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLE 345
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
D + W+++IA Y G +++ LF +M++ N F S+L C++ E G
Sbjct: 346 CENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKG 405
Query: 426 KQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYA 483
+ +V K G + ++ + + GSVEEA + V DVI+W T+++
Sbjct: 406 IKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACK 465
Query: 484 RH 485
H
Sbjct: 466 IH 467
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/646 (36%), Positives = 377/646 (58%), Gaps = 19/646 (2%)
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
K ++V N++++ YA+ AR +FD M ++N +SW L+A Y NG + E LF++
Sbjct: 59 KDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKT 118
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAK---------WIFDRMPVRDEVSWNTMITGYAQNN 261
+ + + N + + + + V + N +I Y++ +
Sbjct: 119 MISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRS 178
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM------ 315
+ A ++ E P DVF++ +++G ++NG EA + D M ++ V W+ +
Sbjct: 179 DVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIV-WDNVTYVTAF 237
Query: 316 -IAGYVQTKRMDMARELFEAMTCKNVASW--NTMITGYAQSGEITHARNLFDRMPQHDCI 372
+ +++ R+ + T S+ + +I Y + G I +AR +F+R+ + +
Sbjct: 238 GLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVV 297
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
SW AI+A Y+Q+G E++L F EM+ G N F +L++CA +++L GK LH ++
Sbjct: 298 SWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRI 357
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
K GFE VGNAL+ MY K GS+E A+ F E++ +D I+W+ MI G + HG G++AL
Sbjct: 358 KKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREAL 417
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
++F+ M P +T VG+LSAC+H G V++G Y + + G+ P +HYTC+V L
Sbjct: 418 VVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGL 477
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
L +AGRLDEA+N MK+ P + D W LL AC ++ L +K AE++ +M+P + G Y
Sbjct: 478 LCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTY 537
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
+LLSN+YA + RW V K+R MR+R VKK G SW+E++N +H F HPE ++IY
Sbjct: 538 ILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIY 597
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
++EL ++ G+V V HDV +E+K + YHSEKLA+AYG++ P+G PIRV+
Sbjct: 598 EKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVI 657
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLR+C DCH+A+K ISK+ R+II+RD NRFH F G CSC DYW
Sbjct: 658 KNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 137/559 (24%), Positives = 240/559 (42%), Gaps = 90/559 (16%)
Query: 25 RLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF 84
RL +P + P+ K + H + K + D ++ I H L +
Sbjct: 5 RLLAPTH-KPFLLKSSTVGHPLEHTIQLLKVSADTKNLKFGKMIHAH---------LIIT 54
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
N + + V N++I+ Y Q+ AR +FD M +R++VSW +++GY N +
Sbjct: 55 NQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLR 114
Query: 145 LFEMMPKRDVVSWN-----TMLS----------GYAQNGYADAARRIFDRMLEKNEISWN 189
LF+ M D + N T++S G+ +GYA + +F + ++ N
Sbjct: 115 LFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVK------N 168
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
L+ Y + ++ A ++ +V S+N ++ G ++ +A + DRM V + +
Sbjct: 169 ALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRM-VDECIV 227
Query: 250 WN--TMITGYAQNNYLAEAQ-------RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
W+ T +T + ++L + + R+F D F +A++ Y + G + AR +
Sbjct: 228 WDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKV 287
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW 343
F+ + KN VSW A++A Y Q + A F M +C +++
Sbjct: 288 FNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISAL 347
Query: 344 ----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
N +I Y++SG I A +F M D I+W+A+I G
Sbjct: 348 GHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGL 407
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAG 440
+ G ++L +F EM E + F VLS CA+L S++ G QL+K G E G
Sbjct: 408 SHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPG 467
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNTMIAGYARH---GFGKDALMLFE 496
++ + CK G ++EA + + K DV++W T+++ H G GK L
Sbjct: 468 VEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVL 527
Query: 497 SMKTVGIKPDDITMVGILS 515
M P D+ +LS
Sbjct: 528 QM-----DPGDVGTYILLS 541
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
T N+ N++I YA+ +I AR LFD M + + +SW A++AGY +G + LRLF
Sbjct: 58 TKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFK 117
Query: 396 EMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M R N F +++S+C++ + G Q HG +K G +V NAL+ MY +
Sbjct: 118 TMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRR 177
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
V+ A + E+ DV S+N +I G +G+ +AL + + M I D++T V
Sbjct: 178 SDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAF 237
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
CSH + G + M R G +S + ++D+ G+ G + A+ + + + +
Sbjct: 238 GLCSHLKDLRLGLQVHCRMFRT-GAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTK-N 295
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
+W A+L A Y + E+A EME + LL N Y
Sbjct: 296 VVSWTAILAA---YSQNGCFEEALNFFPEMEVDG-----LLPNEYT 333
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRR--------SSVSYNAMISGYLLN 105
++ W + + +NGC + AL+ F M P S +A+ G LL+
Sbjct: 295 NVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLH 354
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
++ + F+ ++ N +I+ Y ++ S+ AA +F M RD ++W+ M+ G +
Sbjct: 355 TRIK--KSGFED----HIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLS 408
Query: 166 QNGYADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIEEAC-----MLFESKANWEV 216
+G A +F ML E +++ G+L+A G ++E ++ ++ V
Sbjct: 409 HHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGV 468
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG-YAQNNY-LAE--AQRLFE 271
+ ++G K RL +A+ PV+ D V+W T+++ + NY L + A+ + +
Sbjct: 469 EHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQ 528
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
P DV T+ + + Y + + D I M E+N
Sbjct: 529 MDP-GDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNV 565
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/736 (34%), Positives = 402/736 (54%), Gaps = 88/736 (11%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----N 184
++ Y++ S+ +FE MPK++VV+W ++L+G A +F RM + N
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPN 200
Query: 185 EISWNGLLAAYVQNG------RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
++ +L+A G R+ + F +++ V NSLM + K + DAK +
Sbjct: 201 PFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSS--VFVCNSLMNMYAKCGLVEDAKSV 258
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA------------------------- 273
F+ M RD VSWNT++ G N EA +LF E+
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318
Query: 274 ---------PVKDVF-----TWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG 318
+K F TA+ Y + G++ +A IF +N VSW A+I+G
Sbjct: 319 ALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378
Query: 319 YVQTKRMDMARELFEAM----------------------------------TCKNVASWN 344
+Q + +A LF M +++ S
Sbjct: 379 CIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVG 438
Query: 345 T-MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
T ++ Y++ G A ++F + Q D ++W+A+++ +AQ+G E + LF +M G +
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498
Query: 404 LNRSPFTSVLSTCA-NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
N +SV+ CA A ++ G+Q H +K + V +AL+ MY + G+++ A
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
FE D+D++SWN+MI+GYA+HG+ A+ F M+ GI+ D +T + ++ C+H GL
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V +G +YF SM RD+ + P +HY CMVDL RAG+LDE +L+++MPF A W LL
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
GACR++ EL + +A+ + +EP ++ YVLLSN+YAA+G+W + +VR M R VKK
Sbjct: 679 GACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKK 738
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G SW++++NKVH+F D HP D+IY L+ + +LKQDG+ +T VLHD+ E++
Sbjct: 739 EAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQ 798
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE ML HSE+LA+A+G+++ P G P++++KNLRVC DCH +K +S I R II+RD +
Sbjct: 799 KEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCS 858
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF+GG+CSCGD+W
Sbjct: 859 RFHHFNGGACSCGDFW 874
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 13/340 (3%)
Query: 266 AQRLFEEAPVKDVFTWTAMVS-GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
A+ +E P +D V Y + G V E F + +A ++ ++ R
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 325 MDMARELFEAMTC---------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
R L E + C V++ +++ Y + G + +F+ MP+ + ++W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+++ G A + + + LF M+ G N F SVLS A+ +L+LG+++H Q VK
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G + FV N+L+ MY KCG VE+A F + +D++SWNT++AG + +AL LF
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290
Query: 496 -ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
ES T+G K T ++ C++ + + +S +G T + D
Sbjct: 291 HESRATMG-KMTQSTYATVIKLCANLKQLALARQ-LHSCVLKHGFHLTGNVMTALADAYS 348
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ G L +A N+ + +W A++ C G LA
Sbjct: 349 KCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 99/233 (42%), Gaps = 50/233 (21%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVS------------------- 94
D+ W+ ++ H + G C+ A ++FN M P ++S
Sbjct: 465 DVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQF 524
Query: 95 ---------------YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN--- 136
+A++S Y G +D A+ VF++ RDLVSWN MISGY ++
Sbjct: 525 HAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYS 584
Query: 137 -KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNG 190
K++ R + + D V++ ++ G NG ++ FD M+ ++I+ +
Sbjct: 585 MKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYAC 644
Query: 191 LLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
++ Y + G+++E L + W +L+G K + K+ D++
Sbjct: 645 MVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKL 697
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/702 (37%), Positives = 403/702 (57%), Gaps = 39/702 (5%)
Query: 94 SYNAMISGYLLNGQ---LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
S + +IS + L G LD +R +F Q+ +L WN MI GY R+ + A L+ M
Sbjct: 43 SISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMI 102
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
+ + N + N A + +E+ + +++G FES
Sbjct: 103 AKGIAPPNNFTFPFLLNSCAR-----LSSLEPGHEVH-----SHIIKHG--------FES 144
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
++ N+L+ + L A+ +FD VRD VS+NTMI GYA+ N A LF
Sbjct: 145 ----DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 200
Query: 271 EE----APVKDVFTWTAMVS-GYVQN----GKVDEARMIFDAMP-EKNTVSWNAMIAGYV 320
E + D FT+ A+ S V N GK A++ + + N + +A++ Y
Sbjct: 201 GEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYA 260
Query: 321 QTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ +++A +F M T K+ A+W++M+ GYA+ GEI AR LF+ M + D ISW A+I+
Sbjct: 261 KCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FE 438
GY+Q+G ++L LF EM+ G + + +VLS CA L + +LGK+L+ Q ++ G F
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFN 380
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVD--KDVISWNTMIAGYARHGFGKDALMLFE 496
+ A++ MY KCGS++ A F + K +N+MIAG A+HG G+ A+ +F
Sbjct: 381 QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFR 440
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
+ + G+KPD++T VG+L AC H+GL+E+G + F SM YG+ P +HY CMVDLLGR
Sbjct: 441 ELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRY 500
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G L+EA +L++ MPFE ++ W ALL ACR +G ++ E A + + EME ++ YVLLS
Sbjct: 501 GCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLS 560
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+ A + +W + +VR M D G++K G+S++E+ +H F D HP+ I L+
Sbjct: 561 NILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLK 620
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
++ +LK G+V +T V+ D+ EEEKE ++ YHSEKLA+A+G++ IR++KNLR
Sbjct: 621 DMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLR 680
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+C DCH A K +S+I GR I +RD RFHHF GSCSC D+W
Sbjct: 681 ICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 213/465 (45%), Gaps = 43/465 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG-----QLDPARQV 114
++ WN I + R+ A+ ++ SM + N +LLN L+P +V
Sbjct: 74 NLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEV 133
Query: 115 FDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ + DL N +I Y +L+ AR LF+ RD+VS+NTM+ GYA+
Sbjct: 134 HSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQP 193
Query: 171 DAARRIFDRM----LEKNEISWNGLLAA-YVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
++A +F M + +E ++ L + V N + + N + N L+
Sbjct: 194 ESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKS 253
Query: 226 -----FVKQKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
+ K + A+ +F M + +W++M+ GYA+ + A++LF +DV
Sbjct: 254 AIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVI 313
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+WTAM+SGY Q G+ EA +F M + + V+ A+++ + D+ + L+
Sbjct: 314 SWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQY 373
Query: 336 TCKNVASWNTMITG-----YAQSGEITHARNLFDRMPQH--DCISWAAIIAGYAQSGYSE 388
V + NT++T YA+ G I A +F R+ ++ + ++IAG AQ G E
Sbjct: 374 IENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGE 433
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-----VKVGFEA-GCF 442
++ +F E+ G + + F VL C + +E GK+L + +K E GC
Sbjct: 434 TAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCM 493
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
V LL Y G +EEAY +++ + + + W +++ HG
Sbjct: 494 VD--LLGRY---GCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 158/338 (46%), Gaps = 27/338 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM-PRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D +I + + + + G + A VF++M +S+ ++++M+ GY G+++ AR++F+
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADA 172
M +RD++SW MISGY + S A LF+ M K D V+ +LS A+ G D
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDL 365
Query: 173 ARRIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFE--SKANWEVVSWNSLMGG 225
+R++ + +E + N +L A Y + G I+ A +F K +NS++ G
Sbjct: 366 GKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAG 425
Query: 226 FVKQKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQNNYLAEAQRLFEE-----APV 275
+ Q LG+ R + DEV++ ++ + + E ++LFE
Sbjct: 426 -LAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIK 484
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG---YVQTKRMDMAREL 331
+ + MV + G ++EA + MP E N+V W A+++ + K ++A +
Sbjct: 485 PQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQK 544
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
M ++ A + + A + + AR + M H
Sbjct: 545 LLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDH 582
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/685 (35%), Positives = 391/685 (57%), Gaps = 63/685 (9%)
Query: 123 LVSWNVMISGYVRNKSLSA---------ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
L+ + SG++ K + A AR +F+ +P+ + WN ++ GY++N + A
Sbjct: 44 LLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDA 103
Query: 174 RRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMG 224
++ M + + ++ LL A ++Q GR A +F + +V N L+
Sbjct: 104 LLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFVQNGLIA 162
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
+ K +RLG A+ +F+ +P+ P + + +WTA+
Sbjct: 163 LYAKCRRLGSARTVFEGLPL-----------------------------PERTIVSWTAI 193
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIA---GYVQTKRMDMARELFEAMTCKNV 340
VS Y QNG+ EA IF M + + W A+++ + + + R + ++ +
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 341 A-------SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
S NTM YA+ G++ A+ LFD+M + I W A+I+GYA++GY+ +++ +
Sbjct: 254 EIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM R + TS +S CA + SLE + ++ + + + F+ +AL+ M+ K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CGSVE A F+ +D+DV+ W+ MI GY HG ++A+ L+ +M+ G+ P+D+T +G+
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L AC+H+G+V +G +F M D+ + P +HY C++DLLGRAG LD+A ++K MP +P
Sbjct: 431 LMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
WGALL AC+ + EL E AA+ +F ++P N G YV LSNLYAA+ W V++VR+
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
+M+++G+ K G SW+EV+ ++ F VGD HP + I +E +E +LK+ GFV +
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
LHD+ +EE E L HSE++A+AYG++S P G P+R+ KNLR C +CH A K ISK+V
Sbjct: 610 SLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVD 669
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R I++RD NRFHHF G CSCGDYW
Sbjct: 670 REIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 185/458 (40%), Gaps = 111/458 (24%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA---------------------------- 111
A VF+ +PR +NA+I GY N A
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 112 -----------RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE--MMPKRDVVSWN 158
QVF D+ N +I+ Y + + L +AR +FE +P+R +VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKN-EISWNGLLAAY--------VQNGRIEEACMLFE 209
++S YAQNG A IF +M + + + W L++ ++ GR A ++
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-- 249
Query: 210 SKANWEV-----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
K E+ +S N++ + K ++ AK +FD+M + + WN MI+GYA+N Y
Sbjct: 250 -KMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 265 EAQRLFEEAPVK---------------------------------------DVFTWTAMV 285
EA +F E K DVF +A++
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVA 341
+ + G V+ AR++FD +++ V W+AMI GY R A L+ AM N
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEM 397
++ ++ SG + F+RM H +A +I ++G+ + + + +
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV---I 482
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
K + + + ++LS C +ELG+ QL +
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI 520
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 154/376 (40%), Gaps = 70/376 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVF 115
D D+ N I + + SA VF +P R+ VS+ A++S Y NG+ A ++F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 116 DQMPQRD------------------------------------------LVSWNVMISGY 133
QM + D L+S N M Y
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---Y 267
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWN 189
+ ++ A+ LF+ M +++ WN M+SGYA+NGYA A +F M+ K + IS
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 190 GLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A Q G +E+A ++E S +V ++L+ F K + A+ +FDR R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF 301
D V W+ MI GY + EA L+ V T+ ++ +G V E F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 302 DAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAMTCK-NVASWNTMITG-----YA 351
+ M + A + + +D A E+ + M + V W +++ +
Sbjct: 448 NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV 507
Query: 352 QSGEITHARNLFDRMP 367
+ GE A+ LF P
Sbjct: 508 ELGEYA-AQQLFSIDP 522
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S + S++ + + A L KQ+H +L+ +G + F+ L+ G + A F++
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ + WN +I GY+R+ +DAL+++ +M+ + PD T +L ACS ++ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF-EPDAATWGALLGAC 585
+ ++ G + ++ L + RL A+ + + +P E +W A++ A
Sbjct: 139 -RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA- 196
Query: 586 RLYGKTELAEKAAEVIFEM 604
Y + +A E+ +M
Sbjct: 197 --YAQNGEPMEALEIFSQM 213
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/530 (42%), Positives = 326/530 (61%), Gaps = 8/530 (1%)
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTV 310
Y N + A +FE+ P F W M+ G+ +G+ + ++ M P+K
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 311 SWN-AMIAGYVQTKRMDMARELFEAMTCKNVASWNT-MITGYAQSGEITHARNLFDRMPQ 368
+ AG +R + + C N + ++ YA+ G+I AR +FD+M
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D +SW ++I+GYA +GY+ ++L F M+ G NR SVL C NL +L G+
Sbjct: 882 RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWF 941
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H +++ GFE V A++ MY KCGS++ A F+E KD++ W+ MIA Y HG G
Sbjct: 942 HSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHG 1001
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+ A+ LF+ M G++P +T +LSACSH+GL+E+G YF M ++ + +Y C
Sbjct: 1002 RKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYAC 1061
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLLGRAG+L EA +L++NMP EPDA+ WG+LLGACR++ +LAEK A+ +F ++P +
Sbjct: 1062 MVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVH 1121
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
AG +VLLSN+YAA RW +V KVR M RG K+ G+S +E N+VH F VGD HP+
Sbjct: 1122 AGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQW 1181
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
+++YA LEEL +K G+V T VLHD+ EE KE L YHSE+LA+A+G+++ G
Sbjct: 1182 EKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTT 1241
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+R+ KNLR+C DCHNAIK ISKIV R+I++RD +RFH F G CSCGDYW
Sbjct: 1242 LRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/701 (30%), Positives = 347/701 (49%), Gaps = 65/701 (9%)
Query: 62 RQWNVAITTHMRNGCCDSALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
RQ V + NG S LH VF + + + S Y L AR+VFD+ P
Sbjct: 4 RQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMM-------PKR-------------------- 152
++ WN + Y R K LF +M P
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123
Query: 153 --------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
D+ + ++ Y++ G A ++F+ + + W ++ Y QN
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQN 183
Query: 199 GRIEEACMLFESKANWEVVSWN--SLMGGFVKQKRLGDAK-------WIFDRMPVRDEVS 249
EEA LF + V + +L+ +L + K + R D
Sbjct: 184 NDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPL 243
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
N+++ YA+ A LF + P KDV +W+ M++ Y N +EA +F M EK
Sbjct: 244 VNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRF 303
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----------NTMITGYAQSGEITHA 359
+ + +Q ++R L E +A W +I Y + A
Sbjct: 304 EPNSVTVVSALQA--CAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEA 361
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+LF R+P+ D +SW A+++GYAQ+G + S+ +F M G + + +L+ + L
Sbjct: 362 VDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSEL 421
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+ LHG +V+ GF + FVG +L+ +Y KCGS+ +A F+ ++ +DV+ W++MI
Sbjct: 422 GIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMI 481
Query: 480 AGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
A Y HG G +AL +F+ M K ++P+++T + ILSACSH GLVE+G + F M DY
Sbjct: 482 AAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQ 541
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P+S+H+ MVDLLGR G+L +A +++ MP WGALLGACR++ E+ E AA
Sbjct: 542 LRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAA 601
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ +F ++P +AG Y+LLSN+YA G+W +V+++R ++++RG+KK+ G S +EV+ VH+F
Sbjct: 602 KNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSF 661
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
D HP+ +IY L +LE ++ ++ ++ +LHD G
Sbjct: 662 LASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHDTG 702
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 54/300 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + GC A ++F+ MP + +S++ MI+ Y N + A +F +
Sbjct: 238 DGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHE 297
Query: 118 MPQR---------------------------------------DLVSWNVMISGYVRNKS 138
M ++ D +I Y++
Sbjct: 298 MIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSC 357
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAA 194
A +LF+ +PK+DVVSW +LSGYAQNG A + +F ML + + ++ +LAA
Sbjct: 358 PDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAA 417
Query: 195 YVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+ G ++A L S N V SL+ + K LGDA +F M VRD V W
Sbjct: 418 SSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIW 477
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDV------FTWTAMVSGYVQNGKVDEARMIFDAM 304
++MI Y + EA +F++ VK+ T+ +++S G V+E IFD M
Sbjct: 478 SSMIAAYGIHGRGGEALEIFDQM-VKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRM 536
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 167/389 (42%), Gaps = 56/389 (14%)
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
Q R L + +M YV + AA +FE +P WN M+ G+A +G ++ +
Sbjct: 749 QYDSRILTKFAIM---YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLEL 805
Query: 177 FDRMLEK----NEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFV 227
+ +M+EK ++ ++ L + +Q G++ ++ +N ++ +L+ +
Sbjct: 806 YSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSN-DLFVDAALVDMYA 864
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF-TWTAMVS 286
K + A+ +FD+M VRD VSW +MI+GYA N Y +E F+ V +++S
Sbjct: 865 KCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILS 924
Query: 287 GYVQNGKVDEAR-------MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+ G + R + E + + A++ Y + +D+AR LF+ K+
Sbjct: 925 VLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD 984
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+ W+ MI Y G A +LFD +M +
Sbjct: 985 LVCWSAMIASYGIHGHGRKAIDLFD-------------------------------QMVK 1013
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN--ALLVMYCKCGSV 457
G R + FT VLS C++ LE GK ++ QL+ F + N ++ + + G +
Sbjct: 1014 AGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMVDLLGRAGQL 1072
Query: 458 EEAYHAFEEI-VDKDVISWNTMIAGYARH 485
EA E + V+ D W +++ H
Sbjct: 1073 SEAVDLIENMPVEPDASIWGSLLGACRIH 1101
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 145/337 (43%), Gaps = 59/337 (17%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--------- 152
Y+ ++D A VF+ +P WNVMI G+ + ++ L+ M ++
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 153 ------------------------------DVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
D+ ++ YA+ G +AAR +FD+M
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQKRLG---DAKWI 238
++ +SW +++ Y NG E F+ +++ + + S++ + LG +W
Sbjct: 882 RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW- 940
Query: 239 FDRMPVRDEVSWNTMITG-----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
F ++ ++ ++ Y++ L A+ LF+E KD+ W+AM++ Y +G
Sbjct: 941 FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000
Query: 294 VDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWN 344
+A +FD M + V++ +++ + ++ + F+ MT + ++++
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060
Query: 345 TMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
M+ ++G+++ A +L + MP + D W +++
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 18/253 (7%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV- 155
A++ Y G ++ AR VFD+M RDLVSW MISGY N S F++M V+
Sbjct: 858 ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917
Query: 156 SWNTMLSGYAQNGYADAARR-------IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
+ ++LS G A R+ + E + + ++ Y + G ++ A LF
Sbjct: 918 NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP---VR-DEVSWNTMITGYAQNNYLA 264
+ A ++V W++++ + A +FD+M VR V++ +++ + + L
Sbjct: 978 DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037
Query: 265 EAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG 318
E + F E + + + MV + G++ EA + + MP E + W +++
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
Query: 319 YVQTKRMDMAREL 331
+D+A ++
Sbjct: 1098 CRIHNNLDLAEKI 1110
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 53/261 (20%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQR 121
+ + + G ++A VF+ M R VS+ +MISGY NG FD M P R
Sbjct: 860 VDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNR 919
Query: 122 ---------------------------------DLVSWNVMISGYVRNKSLSAARNLFEM 148
D++ ++ Y + SL AR LF+
Sbjct: 920 VSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDE 979
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEA 204
+D+V W+ M++ Y +G+ A +FD+M++ + +++ +L+A +G +EE
Sbjct: 980 TAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEG 1039
Query: 205 CMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITGYA 258
M F+ V++ + ++ + +L +A + + MPV + S W +++
Sbjct: 1040 KMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACR 1099
Query: 259 QNNYLAEAQR----LFEEAPV 275
+N L A++ LF PV
Sbjct: 1100 IHNNLDLAEKIADHLFHLDPV 1120
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R + C N S+ QLH Q+ K G F L +Y KC S++ A F
Sbjct: 3 SRQVLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK-TVGIKPDDITMVGILSACSHTGLV 523
+E +V WN+ + Y R ++ L LF M T G PD+ T+ L AC+ ++
Sbjct: 60 DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
E G ++ + + + +V+L + G++ EA + + PD W +++
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMV 177
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 8/179 (4%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ +P T +S + L K+ H ++ G + + +MY ++ A
Sbjct: 721 IGSAPGTDTISCFSCL------KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIV 774
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
FE+I + WN MI G+A G +L L+ M G+KPD L +C+ +
Sbjct: 775 FEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDL 834
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
++G + + G + +VD+ + G ++ A+ + M D +W +++
Sbjct: 835 QRG-KVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMI 891
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/738 (34%), Positives = 400/738 (54%), Gaps = 63/738 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
+A++ Y G+++ A ++F MP+++ V+WNV+++GY + ++ LF M + DV
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACML 207
+ T+L G A + + I ++ E NE GL+ Y + G +A +
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGV 371
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV------------SWNTMIT 255
F++ ++V W++L+ +Q + ++ +F M + D + + NT
Sbjct: 372 FKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNL 431
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
Y Q+ + + FE DV A+V+ Y++NG V + ++++M +++ +SWNA
Sbjct: 432 QYGQSIHACVWKYGFE----TDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAY 487
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCK-------------------- 338
++G D +F M +C
Sbjct: 488 LSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL 547
Query: 339 --NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
N +I YA+ + A F+R+ D +W II YAQ+ E +L F +
Sbjct: 548 DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQ 607
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M++ G + N LS C++LASLE G+QLH + K G + FVG+AL+ MY KCG
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGC 667
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+EEA FE ++ +D I+WNT+I GYA++G G AL F M GI PD +T GILSA
Sbjct: 668 MEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH GLVE+G E+F SM RD+G+ P H CMVD+LGR G+ DE ++ ++ M +A
Sbjct: 728 CSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNAL 787
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W +LGA +++ L EKAA +FE++PE Y+LLSN++A GRW DV +VR M
Sbjct: 788 IWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMS 847
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
+GVKK G SW+E +VHTF D HP+ I+ L+EL+ +L +V T+ VLH
Sbjct: 848 SKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLH 907
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
+VGE EK+ LR+HSE+LA+ + ++S + + IR+ KNLR+C DCH+ +KHIS I + I
Sbjct: 908 NVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEI 967
Query: 757 ILRDNNRFHHFSGGSCSC 774
++RD RFHHF G+CSC
Sbjct: 968 VVRDVRRFHHFKNGACSC 985
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 248/531 (46%), Gaps = 40/531 (7%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
V MP R VS+ A+I G + G + + +F +M ++ ++ ++ SL A
Sbjct: 169 VLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMA 228
Query: 143 RNLFEMMPKR--------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
+L + M + D+ + ++ YA+ G + A ++F M E+N+++WN LL
Sbjct: 229 LDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNG 288
Query: 195 YVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVR----- 245
Y Q G + LF S +V + +++ G K L + + + ++
Sbjct: 289 YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQ-VIHSLIIKCGYEG 347
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF---- 301
+E ++ Y++ +A +F+ D+ W+A+++ Q G+ +E+ +F
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR 407
Query: 302 --DAMPEKNTVSWNAMIAGYVQTKRMDMAREL--------FEAMTCKNVASWNTMITGYA 351
D +P + T+ ++++ T + + + FE +VA N ++T Y
Sbjct: 408 LGDTLPNQYTIC--SLLSAATNTGNLQYGQSIHACVWKYGFET----DVAVSNALVTMYM 461
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
++G + L++ M D ISW A ++G G + L +F M G N F S
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L +C+ L + G+Q+H ++K + FV AL+ MY KC +E+A AF + +D
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRD 581
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
+ +W +I YA+ G+ AL F M+ G+KP++ T+ G LS CS +E G + +
Sbjct: 582 LFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQ-LH 640
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
SM G + + + +VD+ + G ++EA+ L + + D W ++
Sbjct: 641 SMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 205/422 (48%), Gaps = 27/422 (6%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEA 273
++S++ ++ LG AK I + V+D ++ W +++ YA+ Y A A+ + +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHG-LIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKM 173
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
P +DV +WTA++ G V G +++ +F M + + +A ++ + MA +L +
Sbjct: 174 PDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233
Query: 334 AMTCK--------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
M + ++ + ++ YA+ GEI A +F MP+ + ++W ++ GYAQ G
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
L+LF M + N T+VL CAN +L+ G+ +H ++K G+E F+G
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
L+ MY KCG +A F+ I D++ W+ +I + G ++++ LF M+ P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ T+ +LSA ++TG ++ G + ++ YG + +V + + G + + L
Sbjct: 414 NQYTICSLLSAATNTGNLQYG-QSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472
Query: 566 MKNMPFEPDAATWGALLGA---CRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYA 620
++M + D +W A L C +Y ++ + + M E MY +S L +
Sbjct: 473 YESM-VDRDLISWNAYLSGLHDCGMY------DRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 621 AS 622
S
Sbjct: 526 CS 527
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/550 (19%), Positives = 215/550 (39%), Gaps = 138/550 (25%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + + G + A +F MP ++ V++N +++GY G + ++F M
Sbjct: 247 DLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMM 306
Query: 120 QRDL----VSWNVMISGYVRNKSLSA---------------------------------- 141
+ D+ + ++ G +K+L
Sbjct: 307 ELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAI 366
Query: 142 -ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-------------------- 180
A +F+ + K D+V W+ +++ Q G ++ + ++F M
Sbjct: 367 DAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAAT 426
Query: 181 -------------------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
E + N L+ Y++NG + + L+ES + +++SWN+
Sbjct: 427 NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNA 486
Query: 222 LMG---------------------GFVKQ-----KRLGDAKWIFD--------RMPVRDE 247
+ GF+ LG +FD ++++
Sbjct: 487 YLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ 546
Query: 248 VSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ N +I YA+ YL +A F V+D+FTWT +++ Y Q + ++A F
Sbjct: 547 LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFR 606
Query: 303 AMPEK----NTVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSG 354
M ++ N + ++G ++ ++L F++ ++ + ++ YA+ G
Sbjct: 607 QMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ A LF+ + + D I+W II GYAQ+G +L F M G + FT +LS
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC-----GSVEEAYHAFEEIVD 469
C++ +E GK+ + + G + V +C C G V + + E+ +
Sbjct: 727 ACSHQGLVEEGKEHFNSMYRD-------FGISPTVDHCACMVDILGRVGK-FDELEDFIQ 778
Query: 470 KDVISWNTMI 479
K +S N +I
Sbjct: 779 KMQLSQNALI 788
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 155/395 (39%), Gaps = 62/395 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N +T +M+NGC ++ SM R +S+NA +SG G D +F M
Sbjct: 449 DVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHML 508
Query: 120 QRDLVS---------------------------------------WNVMISGYVRNKSLS 140
+ + +I Y + L
Sbjct: 509 EEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLE 568
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A F + RD+ +W +++ YAQ + A F +M ++ NE + G L+
Sbjct: 569 DADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCS 628
Query: 197 QNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+E M+F+S ++ ++L+ + K + +A+ +F+ + RD ++WNT
Sbjct: 629 SLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNT 688
Query: 253 MITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+I GYAQN L + + +E D T+T ++S G V+E + F++M
Sbjct: 689 IICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDF 748
Query: 309 TVS-----WNAMIAGYVQTKRMDMARELFEAMT-CKNVASWNTMITGYAQSGEIT----H 358
+S M+ + + D + + M +N W T++ +
Sbjct: 749 GISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKA 808
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
A LF+ P+ + S+ + +A G +D R+
Sbjct: 809 ANKLFELQPEEES-SYILLSNIFATEGRWDDVKRV 842
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL--------LNGQLDPA 111
D+ W V IT + + + AL+ F M + ++G L L G
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLH 640
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
VF D+ + ++ Y + + A LFE + +RD ++WNT++ GYAQNG +
Sbjct: 641 SMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGN 700
Query: 172 AARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN------- 220
A F ML++ + +++ G+L+A G +EE F S +S
Sbjct: 701 KALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760
Query: 221 -SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA----EAQRLFEEAPV 275
++G K L D +I ++ + W T++ +N L A +LFE P
Sbjct: 761 VDILGRVGKFDELED--FIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPE 818
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
++ ++ + + + G+ D+ + + M K
Sbjct: 819 EES-SYILLSNIFATEGRWDDVKRVRSLMSSK 849
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/650 (36%), Positives = 381/650 (58%), Gaps = 51/650 (7%)
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
+L + + L+ AY++ GR+ +A F+ + +V +WN+++ G + R +A +F
Sbjct: 99 LLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLF 158
Query: 240 DRMPVR----DEVSWNTMITG--YAQNNYLAEAQRLF--EEAPVKDVFTWTAMVSGYVQN 291
RM + D V+ ++++ + LA A L+ + ++F AM+ Y +
Sbjct: 159 GRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKL 218
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF----------EAMTCKNVA 341
G ++E R +FD M ++ V+WN++I+G+ Q ++ A E+F + +T ++A
Sbjct: 219 GMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLA 278
Query: 342 S----------------------W--------NTMITGYAQSGEITHARNLFDRMPQHDC 371
S W N ++ YA+ +I A+ +FD MP D
Sbjct: 279 SAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDA 338
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRY-GERLNRSPFTSVLSTCANLASLELGKQLHG 430
+SW +I GY Q+G + +++ ++ M+++ G + + F SVL ++L +L+ G ++H
Sbjct: 339 VSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHA 398
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+K G +VG ++ +Y KCG ++EA FE+ + WN +I+G HG G
Sbjct: 399 LSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAK 458
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
AL LF M+ GI PD +T V +L+ACSH GLV++G +F M YG+ P +KHY CMV
Sbjct: 459 ALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMV 518
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
D+ GRAG+LD+A + ++NMP +PD+A WGALLGACR++G E+ + A++ +FE++P+N G
Sbjct: 519 DMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVG 578
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD--TLHPEK 668
YVL+SN+YA G+W V +VR +R + ++K G+S +EV+ V+ F G+ +HP+
Sbjct: 579 YYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQH 638
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
+ I L +L K++ G+V VL DV E+EKE +L HSE+LA+A+GI++ P P
Sbjct: 639 EEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTP 698
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ + KNLRVC DCHNA K+ISKI R II+RD+NRFHHF G CSCGD+W
Sbjct: 699 LHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 187/466 (40%), Gaps = 131/466 (28%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
R + + A++ YL G++ A + FD+M RD+ +WN M+SG RN + A LF
Sbjct: 101 RGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGR 160
Query: 149 MPKRDVVS---------------------------------------WNTMLSGYAQNGY 169
M V N M+ Y + G
Sbjct: 161 MVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGM 220
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES------------------- 210
+ R++FD M ++ ++WN +++ + Q G++ A +F
Sbjct: 221 LEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280
Query: 211 ------------------KANWEV---VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
+ W+V ++ N+++ + K ++ A+ +FD MPVRD VS
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340
Query: 250 WNTMITGYAQNNYLAEAQRLFEE-------APVK-------------------------- 276
WNT+ITGY QN +EA +++ P++
Sbjct: 341 WNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400
Query: 277 -------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
DV+ T ++ Y + GK+DEA ++F+ P ++T WNA+I+G A
Sbjct: 401 IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460
Query: 330 ELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAG 380
LF M + ++ ++ +++ + +G + RN F+ M I +A ++
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ ++G +D+ M + + + + ++L C ++E+GK
Sbjct: 521 FGRAGQLDDAFDFIRNMP---IKPDSAIWGALLGACRIHGNVEMGK 563
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 163/343 (47%), Gaps = 36/343 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN-----AMISGYLLNGQLDPARQV 114
D+ WN I+ H + G SA+ +F M R S VS + ++ S G + R V
Sbjct: 235 DLVTWNSIISGHEQGGQVASAVEMFCGM-RDSGVSPDVLTLLSLASAIAQCGDICGGRSV 293
Query: 115 FDQMPQR-----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
M +R D+++ N ++ Y + + AA+ +F+ MP RD VSWNT+++GY QNG
Sbjct: 294 HCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGL 353
Query: 170 ADAARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWN 220
A A ++D M L+ + ++ +L AY G +++ + ++ N +V
Sbjct: 354 ASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGT 413
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK 276
++ + K +L +A +F++ P R WN +I+G + + A+A LF +E
Sbjct: 414 CVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISP 473
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMAREL 331
D T+ ++++ G VD+ R F+ M + + M+ + + ++D A +
Sbjct: 474 DHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDF 533
Query: 332 FEAMTCK-NVASWNTM-----ITGYAQSGEITHARNLFDRMPQ 368
M K + A W + I G + G++ ++NLF+ P+
Sbjct: 534 IRNMPIKPDSAIWGALLGACRIHGNVEMGKVA-SQNLFELDPK 575
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/553 (42%), Positives = 336/553 (60%), Gaps = 6/553 (1%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMV- 285
RL + ++F+ + S++ +I + Q+ A ++ + FT+++++
Sbjct: 94 RLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLK 153
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
S +++GKV + I + V ++ Y + + AR+LF+ M +++ S T
Sbjct: 154 SCSLESGKVLHCQAIKLGLGSDLYVR-TGLVDVYARGGDVVCARQLFDKMPERSLVSLTT 212
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
M+T Y++ GE+ AR+LF+ M + D + W +I GYAQSG +SL+LF M N
Sbjct: 213 MLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPN 272
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+VLS C L +LE G+ +H + G + VG AL+ MY KCGS+E+A F+
Sbjct: 273 EVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFD 332
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
I DKDV++WN+MI GYA HGF + AL LFE M G KP DIT +GILSAC H GLVE+
Sbjct: 333 RIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEE 392
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G +F M YG+ P +HY CMV+LLGRAG L+EA L+KNM D WG LLG C
Sbjct: 393 GRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCC 452
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
RL+ +L E+ A+ + + + N+G YVLLSN+YAA+G W V+K+R M++ G++K G
Sbjct: 453 RLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHG 512
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
S +EV NKVH F G+ HP+ IY L E+ LK G+ T +VLHD+ EE+KE
Sbjct: 513 CSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQ 572
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L HSEKLA+A+G++S G ++++KNLRVC DCH +K IS+I GR I++RD NRFH
Sbjct: 573 SLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFH 632
Query: 766 HFSGGSCSCGDYW 778
HF G CSCGDYW
Sbjct: 633 HFEDGLCSCGDYW 645
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 16/226 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ Y G + ARQ+FD+MP+R LVS M++ Y + L AR+LFE M +RDVV
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVV 239
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML---F 208
WN M+ GYAQ+G + + ++F RML NE++ +L+A Q G +E +
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYI 299
Query: 209 ESKA-NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
E+K V +L+ + K L DA+ +FDR+ +D V+WN+MI GYA + + A
Sbjct: 300 ENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHAL 359
Query: 268 RLFEE------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+LFEE P T+ ++S G V+E R F M +K
Sbjct: 360 QLFEEMTETGHKPTD--ITFIGILSACGHGGLVEEGRSFFRLMRDK 403
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 164/369 (44%), Gaps = 59/369 (15%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW--------- 214
YA G D + +F+ E N S++ ++ ++VQ+ + A + +
Sbjct: 89 YAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTF 148
Query: 215 -EVVSWNSLMGGFVKQ----------------------KRLGD---AKWIFDRMPVRDEV 248
V+ SL G V R GD A+ +FD+MP R V
Sbjct: 149 SSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLV 208
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF------D 302
S TM+T Y++ L +A+ LFE +DV W M+ GY Q+G +E+ +F
Sbjct: 209 SLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAK 268
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITH 358
A+P N V+ A+++ Q ++ R + + K NV +I Y++ G +
Sbjct: 269 AIP--NEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLED 326
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
AR +FDR+ D ++W ++I GYA G+S+ +L+LF EM G + F +LS C +
Sbjct: 327 ARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGH 386
Query: 419 LASLELGKQLHGQLV-KVGFEA-----GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKD 471
+E G+ + K G E GC V + + G +EEAY + + + D
Sbjct: 387 GGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVN-----LLGRAGHLEEAYGLVKNMTIAAD 441
Query: 472 VISWNTMIA 480
+ W T++
Sbjct: 442 PVLWGTLLG 450
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 44/324 (13%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA G + + +F+ + + S++AII + QS + + + +M G N F
Sbjct: 89 YAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTF 148
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL---------------------- 447
+SVL +C SLE GK LH Q +K+G + +V L
Sbjct: 149 SSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPE 204
Query: 448 ---------LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
L Y K G +++A FE + ++DV+ WN MI GYA+ G ++L LF M
Sbjct: 205 RSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRM 264
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
P+++T++ +LSAC G +E G + +S + G+ N T ++D+ + G
Sbjct: 265 LVAKAIPNEVTVLAVLSACGQLGALESG-RWIHSYIENKGIQINVHVGTALIDMYSKCGS 323
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-EPENAGMYVLLSN 617
L++A+ L+ + + D W +++ ++G ++ A ++ EM E + +
Sbjct: 324 LEDAR-LVFDRIRDKDVVAWNSMIVGYAMHG---FSQHALQLFEEMTETGHKPTDITFIG 379
Query: 618 LYAASGRWGDVSKVR---LKMRDR 638
+ +A G G V + R MRD+
Sbjct: 380 ILSACGHGGLVEEGRSFFRLMRDK 403
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 138/304 (45%), Gaps = 49/304 (16%)
Query: 81 LHVFNSMPRRSSVSYNAMIS-----GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR 135
L + S+ RR + +N +++ Y G+LD + VF+ + ++ S++ +I +V+
Sbjct: 64 LQIHASLLRRG-LYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQ 122
Query: 136 NKSLSAARNLFEMMPK-----------------------------------RDVVSWNTM 160
++ A + M D+ +
Sbjct: 123 SRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGL 182
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
+ YA+ G AR++FD+M E++ +S +L Y + G +++A LFE +VV WN
Sbjct: 183 VDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWN 242
Query: 221 SLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
++GG+ + ++ +F RM + +EV+ +++ Q L + + K
Sbjct: 243 VMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENK 302
Query: 277 ----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
+V TA++ Y + G +++AR++FD + +K+ V+WN+MI GY A +LF
Sbjct: 303 GIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLF 362
Query: 333 EAMT 336
E MT
Sbjct: 363 EEMT 366
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYL 103
K+R+ + + D+ WNV I + ++G + +L +F M + V+ A++S
Sbjct: 225 KARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACG 284
Query: 104 LNGQLDPARQVFDQMPQRDLVSWNV-----MISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
G L+ R + + + + NV +I Y + SL AR +F+ + +DVV+WN
Sbjct: 285 QLGALESGRWIHSYIENKG-IQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWN 343
Query: 159 TMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLF 208
+M+ GYA +G++ A ++F+ M E +I++ G+L+A G +EE F
Sbjct: 344 SMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFF 397
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 12/215 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F S++ ++A L Q+H L++ G + L Y G ++ + F
Sbjct: 50 FASLIDKSKSVAHL---LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD 106
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ +V S++ +I + + A + M + G++P+ T +L +CS +E G +
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESG-K 161
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+ G+ + T +VD+ R G + A+ L MP E + +L Y
Sbjct: 162 VLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMP-ERSLVSLTTMLTC---Y 217
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
K +KA + M+ + + ++ YA SG
Sbjct: 218 SKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSG 252
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/571 (41%), Positives = 353/571 (61%), Gaps = 13/571 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ----NNYLAEAQRLFEEAPV 275
N+L+ + K + A +FD MP RD VSW +++T + + L+ +F +
Sbjct: 42 NTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGL 101
Query: 276 K-DVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+ D F + +V GY++ GK AR + + V +++I Y + + D AR
Sbjct: 102 QPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK-SSLIDMYTKCGQPDEAR 160
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+F+++ KN SW +MI+GYA+SG A +LF + P + SW A+I+G QSG+
Sbjct: 161 AVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIY 220
Query: 390 SLRLFIEMKRYG-ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
S LF EM+R G + ++ +SV+ CANLA LELGKQ+HG ++ +GFE+ F+ NAL+
Sbjct: 221 SFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALV 280
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KC + A F + KDVISW ++I G A+HG ++AL L++ M IKP+++
Sbjct: 281 DMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEV 340
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T VG+L ACSH GLV +G E F SM DY + P+ +HYTC++DLL R+G LDEA+NL+
Sbjct: 341 TFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDK 400
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
+PF+PD TW +LL AC + E+ + A+ + +++PE+ Y+LLSN+YA + WG V
Sbjct: 401 IPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSV 460
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGF 687
SKVR M V+K GYS ++ F G++ HP K+ I L++L+ ++++ G+
Sbjct: 461 SKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGY 520
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V +T VL+D+ ++EKE L +HSE+LAVAYG+L G IR++KNLR+C DCHN +K
Sbjct: 521 VPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKF 580
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS IV R I++RD R+HHF G CSC D+W
Sbjct: 581 ISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 186/436 (42%), Gaps = 98/436 (22%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY----VRNKSLSAARNL 145
+SS+ N ++ Y G + A Q+FD+MP RD VSW +++ + + ++LS +
Sbjct: 36 KSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTM 95
Query: 146 FE---MMPKR---------------------------------DVVSWNTMLSGYAQNGY 169
F + P D V ++++ Y + G
Sbjct: 96 FTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQ 155
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
D AR +FD +L KN +SW +++ Y ++GR EA LF + SW +L+ G ++
Sbjct: 156 PDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQS 215
Query: 230 KRLGDAKWIFDRM-----PVRDEVSWNTMITG---------------------------- 256
+ +F+ M + D + ++++ G
Sbjct: 216 GHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFI 275
Query: 257 -------YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP---- 305
YA+ + + A+ +F P KDV +WT+++ G Q+GK +EA ++D M
Sbjct: 276 SNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRI 335
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHAR 360
+ N V++ ++ + RELF +MT ++ + ++ ++SG + A
Sbjct: 336 KPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAE 395
Query: 361 NLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
NL D++P + D +WA++++ + E +R+ R + P T +L L
Sbjct: 396 NLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI---ADRVLDLKPEDPSTYIL-----L 447
Query: 420 ASLELGKQLHGQLVKV 435
+++ G ++ G + KV
Sbjct: 448 SNVYAGAEMWGSVSKV 463
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+N S F L CA S +LH Q++K GF+ + N LL +Y KCG + +A
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F+E+ ++D +SW +++ + + + L + +M T G++PD I+ ACS G
Sbjct: 61 FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120
Query: 523 VEKGTE----YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
+ G + + S D V+ +S ++D+ + G+ DEA+ + ++ F+ ++ +W
Sbjct: 121 LRLGKQVHARFMLSXFCDDEVVKSS-----LIDMYTKCGQPDEARAVFDSILFK-NSVSW 174
Query: 579 GALLGA 584
+++
Sbjct: 175 TSMISG 180
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 58/312 (18%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-- 121
W I+ + R+G A+ +F P R+ S+ A+ISG + +G + +F++M +
Sbjct: 174 WTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGI 233
Query: 122 DLVS--------------------------------------WNVMISGYVRNKSLSAAR 143
D+V N ++ Y + + AA+
Sbjct: 234 DIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAK 293
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNG 199
++F MP++DV+SW +++ G AQ+G A+ A ++D M ++ NE+++ GLL A G
Sbjct: 294 DIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAG 353
Query: 200 RIEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTM 253
+ LF S N + + L+ + L +A+ + D++P + DE +W ++
Sbjct: 354 LVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASL 413
Query: 254 ITGYAQNNYLAE----AQRLFEEAPVKDVFTWTAMVSGYVQN---GKVDEARMIFDAMPE 306
++ ++N L A R+ + P +D T+ + + Y G V + R + +M
Sbjct: 414 LSACMRHNNLEMGVRIADRVLDLKP-EDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEV 472
Query: 307 KNTVSWNAMIAG 318
+ ++++ G
Sbjct: 473 RKEPGYSSIDFG 484
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/559 (40%), Positives = 341/559 (61%), Gaps = 12/559 (2%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNY-LAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
L DA + +P D S+NT++ ++ LA A+ LF+ P +D F+W+A+VS +V+
Sbjct: 77 LPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVR 136
Query: 291 NGKVDEARMIFDAMPEK-------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS- 342
+G+ A I+ M + N + ++ +A + REL + + + +
Sbjct: 137 HGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDAD 196
Query: 343 ---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
W+ + YA+ G + AR++FDRMP D +SW A++ Y +G + RLF+ M R
Sbjct: 197 AVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMR 256
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G N + VL CA S +LGKQ+HG++ K CF G+AL+ MY K G +
Sbjct: 257 SGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGT 316
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F + D++SW MI+GYA++G +AL F+ + + G +PD +T VG+LSAC+H
Sbjct: 317 AMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAH 376
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
GLV+KG F+S+ YG+ + HY C++DLL R+G + A++++ MP +P+ W
Sbjct: 377 AGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWA 436
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
+LLG CR++ LA AAE +FE+EPEN YV L+N+YA+ G + +V +R M RG
Sbjct: 437 SLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRG 496
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
+ K+ SW+EV +VH F VGD HP+ + IYA L++L K++++G+V T VLHDV
Sbjct: 497 ITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVE 556
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
+E+K+ + YHSE+LAVA+GI++ P G PI+V KNLR+C DCH IK ISKIV R II+R
Sbjct: 557 DEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVR 616
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D+NRFHHF GSCSC DYW
Sbjct: 617 DSNRFHHFKNGSCSCRDYW 635
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 139/337 (41%), Gaps = 72/337 (21%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----------------- 121
SA +F+ MPRR S++A++S ++ +GQ A ++ +M +
Sbjct: 111 SARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALA 170
Query: 122 -------------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
D V W+ + Y + L AR++F+ MP RDVVS
Sbjct: 171 AATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVS 230
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQ----------NGRIE 202
W ML Y G R+F RM+ NE ++ G+L A + +GR+
Sbjct: 231 WTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMA 290
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
+S+ + ++L+ + K +G A +F MP D VSW MI+GYAQN
Sbjct: 291 ------KSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQ 344
Query: 263 LAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA---- 314
EA F+ D T+ ++S G VD+ IF ++ +K + A
Sbjct: 345 PDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYA 404
Query: 315 -MIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG 349
+I ++ + A ++ M K N W +++ G
Sbjct: 405 CVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGG 441
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 122/292 (41%), Gaps = 54/292 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D W+ + + G D A VF+ MP R VS+ AM+ Y G+ ++F +
Sbjct: 194 DADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVR 253
Query: 118 MPQRDLV---------------------------------------SWNVMISGYVRNKS 138
M + ++ + + ++ Y +
Sbjct: 254 MMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGD 313
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA 194
+ A +F MPK D+VSW M+SGYAQNG D A FD +L + +++ G+L+A
Sbjct: 314 MGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSA 373
Query: 195 YVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G +++ +F S + + + ++ + A+ + + MPV+ ++
Sbjct: 374 CAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKF 433
Query: 249 SWNTMITG--YAQNNYLA--EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
W +++ G +N LA A+ LFE P ++ T+ + + Y G DE
Sbjct: 434 LWASLLGGCRIHKNVRLAWWAAEALFEIEP-ENPATYVTLANIYASVGLFDE 484
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 15/193 (7%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
S + +A++ Y G + A +VF MP+ DLVSW MISGY +N A + F+M+
Sbjct: 297 SCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLL 356
Query: 151 ----KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRI 201
+ D V++ +LS A G D IF + +K I + ++ ++G
Sbjct: 357 SSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLF 416
Query: 202 EEA-CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW----IFDRMPVRDEVSWNTMITG 256
E A M+ W SL+GG K + A W +F+ P + ++ T+
Sbjct: 417 ERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEP-ENPATYVTLANI 475
Query: 257 YAQNNYLAEAQRL 269
YA E + +
Sbjct: 476 YASVGLFDEVENM 488
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 271/814 (33%), Positives = 426/814 (52%), Gaps = 99/814 (12%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN------AMISGYLLNGQLDPA 111
D ++ W + + +G L+V+ M R+ VS N S LL Q+
Sbjct: 259 DHNVVSWTSLMVGYSDSGNPGEVLNVYQRM-RQEGVSGNQNTFATVTSSCGLLEDQV-LG 316
Query: 112 RQVFDQMPQ---RDLVS-WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
QV + Q D VS N +IS + S+ A +F+ M + D++SWN M+S YA +
Sbjct: 317 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 376
Query: 168 GYADAARRIFDRM---------------------------------------LEKNEISW 188
G + R F M L+ N
Sbjct: 377 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 436
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PV 244
N LL Y + GR E+A ++F++ +++SWNS+M +V+ + D I + V
Sbjct: 437 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 496
Query: 245 RDEVSWNTMITGYAQNNYLAEAQ---RLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMI 300
+ V++ + + + L E++ L A D + A+V+ Y + G + EA+ +
Sbjct: 497 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 556
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS------------------ 342
MP+ + V+WNA+I G+ + + + A + ++ + K + +
Sbjct: 557 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 616
Query: 343 ----------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
N++IT YA+ G++ + +FD + I+W A++A
Sbjct: 617 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 676
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
A G E++L++F EM+ G L++ F+ L+ ANLA LE G+QLHG ++K+GFE+
Sbjct: 677 NAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESD 736
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
V NA + MY KCG + + + +++ +SWN +I+ +ARHG + A F M
Sbjct: 737 LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLK 796
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
+G KPD +T V +LSAC+H GLV++G Y+ SM R++GV P +H C++DLLGR+GRL
Sbjct: 797 LGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLS 856
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
A+ +K MP P+ W +LL ACR++G ELA K AE + E++P + YVL SN+ A
Sbjct: 857 HAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCA 916
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
SG+W DV +R +M +KK SW+++++KVH+F +G+ HP+ RI A L EL
Sbjct: 917 TSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMK 976
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
K+ G+V T LHD+ EE+KE+ L HSE+LA+A+G+++ P +R+ KNLRVC D
Sbjct: 977 MTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGD 1036
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
CH+ K +S IVGR I+LRD RFHHFSGG CSC
Sbjct: 1037 CHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/689 (24%), Positives = 295/689 (42%), Gaps = 139/689 (20%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-- 118
I Q N I + + G + A +VF+ M R+ S++ M+SGY+ G + A +F QM
Sbjct: 129 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 188
Query: 119 ----PQRDLVSWNVMI---SGYVRNKSLSA------------------------------ 141
P +V+ + SGY+ ++
Sbjct: 189 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 248
Query: 142 -ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN-- 198
A+ LFE MP +VVSW +++ GY+ +G ++ RM ++ +S N A V +
Sbjct: 249 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG-VSGNQNTFATVTSSC 307
Query: 199 GRIEEACMLFESKANW-------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
G +E+ + ++ + V NSL+ F + +A ++FD M D +SWN
Sbjct: 308 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWN 367
Query: 252 TMITGYAQNNYLAEAQRLFE-------------------EAPVKDVFTWTAMVSG----- 287
MI+ YA + E+ R F D W + G
Sbjct: 368 AMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKL 427
Query: 288 ---------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT-KRMDMAREL 331
Y + G+ ++A ++F AM E++ +SWN+M+A YVQ K +D + L
Sbjct: 428 GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKIL 487
Query: 332 FEAM----------------TCKN---------------VASW-------NTMITGYAQS 353
E + C N VA + N ++T Y +
Sbjct: 488 AELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKL 547
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + A+ + MPQ D ++W A+I G+A++ ++++ + ++ G N SVL
Sbjct: 548 GMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVL 607
Query: 414 STCANLASL-ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C+ L + G +H +V GFE+ +V N+L+ MY KCG + + + F+ + +K
Sbjct: 608 GACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSP 667
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
I+WN M+A A HG G++AL +F M+ VG+ D + G L+A ++ ++E+G + +
Sbjct: 668 ITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LHG 726
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ G + +D+ G+ G + + ++ P +W L+ A + +
Sbjct: 727 LVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISA---FARHG 782
Query: 593 LAEKAAEVIFEM-----EPENAGMYVLLS 616
+KA E EM +P++ LLS
Sbjct: 783 CFQKARETFHEMLKLGPKPDHVTFVSLLS 811
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 228/502 (45%), Gaps = 93/502 (18%)
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-- 270
N + N+L+ + K + A+++FD M R+E SW+TM++GY + EA LF
Sbjct: 126 NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 185
Query: 271 --------------------------------------EEAPVKDVFTWTAMVSGYVQNG 292
+ + DV+ TA+V Y G
Sbjct: 186 MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 245
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----------------- 335
V A+ +F+ MP+ N VSW +++ GY + +++ M
Sbjct: 246 LVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTS 305
Query: 336 TC----------------------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+C +V+ N++I+ ++ + A +FD M + D IS
Sbjct: 306 SCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIIS 365
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I+ YA G +SLR F M+ N + +S+LS C+++ +L+ G+ +HG +V
Sbjct: 366 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 425
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K+G ++ + N LL +Y + G E+A F+ + ++D+ISWN+M+A Y + G D L
Sbjct: 426 KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 485
Query: 494 LFESMKTVGIKPDDITMVGILSACSHT-GLVEKGTEY---FYSMNRDYGVIPNSKHYTCM 549
+ + +G + +T L+ACS+ L+E + + D+ ++ N+ +
Sbjct: 486 ILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA-----L 540
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME-PEN 608
V + G+ G + EA+ +++ MP +PD TW AL+G + A KA ++I E P N
Sbjct: 541 VTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 599
Query: 609 AGMYVLLSNLYAASGRWGDVSK 630
Y+ + ++ A D+ K
Sbjct: 600 ---YITMVSVLGACSAPDDLLK 618
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
Query: 389 DSLRLFIEMKR--YGER-LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
D ++F++ + YG R LN F L + + S GK LH + G F N
Sbjct: 76 DIAKVFLQQQHTDYGIRCLNAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTN 133
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
L+ MY K G++E A + F+E+ ++ SW+TM++GY R G ++A+ LF M +G++P
Sbjct: 134 TLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEP 193
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ + +++ACS +G + + G++ + T +V G G + AQ L
Sbjct: 194 NGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKL 253
Query: 566 MKNMPFEPDAATWGALL 582
+ MP + + +W +L+
Sbjct: 254 FEEMP-DHNVVSWTSLM 269
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 210/473 (44%), Positives = 318/473 (67%)
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
EK+ N+++ Y + A +F+ M +V SW +MI G+ + G++ AR LFD+
Sbjct: 151 EKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQ 210
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
MP+ + ++W+ +I+GYAQ+ + + ++ LF ++ G R N + SV+S+CA+L +LELG
Sbjct: 211 MPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELG 270
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
++ H +VK G +G AL+ MY +CGS+++A FE++ ++D +SW +IAG A H
Sbjct: 271 ERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMH 330
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G+ + +L F +M G+ P DIT +LSACSH GLVE+G + F SM RD+ V P +H
Sbjct: 331 GYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEH 390
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y CMVDLLGRAG+L+EA+ + MP +P+A WGALLGACR++ E+ E+ +++ ++
Sbjct: 391 YGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLL 450
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
P+++G YVLLSN+YA + W V+++R M+ +G+KK G+S +E+ +VH F++GD+ H
Sbjct: 451 PQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSH 510
Query: 666 PEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
PE D+I EE+ +++ G+ +T L D+ EEEKE L HSEKLA+A+G++ A
Sbjct: 511 PEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEA 570
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIR++KNLRVCEDCH A K ISK+ GR +I+RD NRFHHF G CSC DYW
Sbjct: 571 GTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 107/233 (45%), Gaps = 50/233 (21%)
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+D N+++ YA A +F+ DV +WT+M+ G+ + G V+ AR +FD M
Sbjct: 152 KDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQM 211
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG--------------- 349
PEKN V+W+ MI+GY Q D A ELF+ + + V + T++
Sbjct: 212 PEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGE 271
Query: 350 ------------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
YA+ G I A +F+ +P+ D +SW A+IAG A G
Sbjct: 272 RAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHG 331
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
YSE SL+ F M G FT+VLS C+ HG LV+ GF+
Sbjct: 332 YSERSLKYFATMVEAGLTPRDITFTAVLSACS-----------HGGLVERGFQ 373
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 140/294 (47%), Gaps = 35/294 (11%)
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I +A +F ++ + + A+I G++ S + + +++ +R G + F ++ +
Sbjct: 69 IDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKS 128
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C L + +G Q HG ++K GFE +V N+L+ MY G E A F+ + DV+SW
Sbjct: 129 CTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSW 188
Query: 476 N-------------------------------TMIAGYARHGFGKDALMLFESMKTVGIK 504
TMI+GYA++ A+ LF+ +++ G++
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVR 248
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
++ MV ++S+C+H G +E G E + G+ N T +VD+ R G +D+A
Sbjct: 249 ANETVMVSVISSCAHLGALELG-ERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVW 307
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE--MEPENAGMYVLLS 616
+ +++P E D +W AL+ ++G +E + K + E + P + +LS
Sbjct: 308 VFEDLP-ERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLS 360
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 167/368 (45%), Gaps = 37/368 (10%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N+++ Y G + A +F +M D+VSW MI G+ + + +AR LF+ MP++++V
Sbjct: 158 NSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLV 217
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
+W+TM+SGYAQN + D A +F + + NE ++++ G +E L E
Sbjct: 218 TWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALE----LGERA 273
Query: 212 ANWEV---VSWNSLMGG-----FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
++ V ++ N ++G + + + A W+F+ +P RD +SW +I G A + Y
Sbjct: 274 HDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYS 333
Query: 264 AEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNA 314
+ + F E T+TA++S G V+ IF++M + V +
Sbjct: 334 ERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGC 393
Query: 315 MIAGYVQTKRMDMARELFEAMTCK-NVASWNTM-----ITGYAQSGEITHARNLFDRMPQ 368
M+ + +++ A M K N W + I A+ GE + L +PQ
Sbjct: 394 MVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERV-GKILIQLLPQ 452
Query: 369 HDCISWAAIIAG-YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
H + +++ YA + E + MK G L + P S++ + +G
Sbjct: 453 HS--GYYVLLSNIYANAKEWEKVTEMRQMMKAKG--LKKPPGHSLIELDGRVHKFTIGDS 508
Query: 428 LHGQLVKV 435
H ++ K+
Sbjct: 509 SHPEMDKI 516
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 172/384 (44%), Gaps = 59/384 (15%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+D A ++F Q+ +L +N MI G+ +K+ A + + ++ ++ N ++
Sbjct: 69 IDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKS 128
Query: 168 GY--------ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
+ A I EK+ N L+ Y G E A ++F+ +VVSW
Sbjct: 129 CTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSW 188
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE-------- 271
S++ GF K + A+ +FD+MP ++ V+W+TMI+GYAQNN+ +A LF+
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVR 248
Query: 272 --------------------------EAPVKDVFTW-----TAMVSGYVQNGKVDEARMI 300
+ VK+ T TA+V Y + G +D+A +
Sbjct: 249 ANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWV 308
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMITGYAQSGEI 356
F+ +PE++T+SW A+IAG + + + F M + ++ +++ + G +
Sbjct: 309 FEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLV 368
Query: 357 THARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+F+ M + + + ++ ++G E++ R ++M + N + +
Sbjct: 369 ERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMP---VKPNAPVWGA 425
Query: 412 VLSTCANLASLELGKQLHGQLVKV 435
+L C + E+G+++ L+++
Sbjct: 426 LLGACRIHKNAEIGERVGKILIQL 449
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/543 (42%), Positives = 337/543 (62%), Gaps = 35/543 (6%)
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM-- 299
M DEVSWN++I G + + +A F++ +D+ K+DE +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDM--------------KIDEYTLPS 46
Query: 300 ---IFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE 355
F +M +N +S + +I ++T FEA N N +I YA+ G+
Sbjct: 47 VLNSFASMKVMQNAISVHCLI---IKTG--------FEAYKLVN----NALIDMYAKQGK 91
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ A +F +M D +SW +++ GY+ +G E++++LF +M+ G ++ SVLS
Sbjct: 92 LDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSA 151
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA L ++ G+Q+H LVK G E+ V N+L+ MY KCGS+ +A AF+ + +DVISW
Sbjct: 152 CAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISW 211
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+I GYA++G GK +L ++ M G KPD IT +G+L ACSH GL+ G YF +M++
Sbjct: 212 TALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDK 271
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
YG+ P +HY CM+DLLGR+G+L EA+ L+ M PDA W ALL ACR++ + EL E
Sbjct: 272 VYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGE 331
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AA+ +FE+EP N+ YV+LSN+Y+A+G+W D +++R MR RG+ K GYSW+E +KV
Sbjct: 332 MAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKV 391
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
TF D HP ++ IY+ ++E+ +K+ G+V LHD +E KE L YHSEKLA
Sbjct: 392 STFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKELGLAYHSEKLA 451
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
VA+G+L++P G PIR+ KNLRVC DCH A+K+ SK+ R IILRD+N FHHF+ G CSCG
Sbjct: 452 VAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCG 511
Query: 776 DYW 778
DYW
Sbjct: 512 DYW 514
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 137/307 (44%), Gaps = 23/307 (7%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY----VQNGR 200
M D VSWN+++ G + G+ + A F +M ++ +E + +L ++ V
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
I C++ ++ + N+L+ + KQ +L A +F +M +D VSW +++TGY+ N
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN---------GKVDEARMIFDAMPEKNTVS 311
EA +LF + + V+ V+ + G+ A ++ + +V
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----P 367
N+++ Y + + A F+ M ++V SW +I GYAQ+G H+ +D+M
Sbjct: 181 -NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGK 426
+ D I++ ++ + +G F M K YG + + ++ L K
Sbjct: 240 KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAK 299
Query: 427 QLHGQLV 433
L Q+V
Sbjct: 300 GLLNQMV 306
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 159/372 (42%), Gaps = 31/372 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVF 115
D WN I +R G + AL F M R + ++++ + + A V
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64
Query: 116 DQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + ++ N +I Y + L A +F M +DVVSW ++++GY+ NG +
Sbjct: 65 CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124
Query: 172 AARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLM 223
A ++F +M + ++I+ +L+A + ++ L +S + NSL+
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLV 184
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVF 279
+ K + DA FD MP RD +SW +I GYAQN + + +++ D
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEA 334
T+ ++ NG + R F+AM + + + MI ++ ++ A+ L
Sbjct: 245 TFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304
Query: 335 M-TCKNVASWNTMITGYAQSGEI----THARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
M + W ++ E+ A+NLF+ P + + + + Y+ +G ED
Sbjct: 305 MVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNS-MPYVMLSNMYSAAGKWED 363
Query: 390 SLRLFIEMKRYG 401
+ R+ M+ G
Sbjct: 364 AARIRRLMRSRG 375
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/661 (37%), Positives = 376/661 (56%), Gaps = 20/661 (3%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK------NEISWNGL 191
SL AR +F+ +P+ + +WNT++ YA + F M+ N+ ++ L
Sbjct: 80 SLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFL 139
Query: 192 L--AAYVQNGRIEEAC--MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+ AA V + + ++ M +S +V NSL+ + L A +F + +D
Sbjct: 140 IKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 199
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDA 303
VSWN+MI G+ Q +A LF++ +DV T ++S + ++ R +
Sbjct: 200 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSY 259
Query: 304 MPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+ E N NAM+ Y + ++ A+ LF+AM K+ +W TM+ GYA S + A
Sbjct: 260 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 319
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCAN 418
R + + MP+ D ++W A+I+ Y Q+G ++L +F E++ + +LN+ S LS CA
Sbjct: 320 REVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQ 379
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+ +LELG+ +H + K G + +V +AL+ MY KCG +E+A F + +DV W+ M
Sbjct: 380 VGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAM 439
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I G A HG G +A+ +F M+ +KP+ +T + ACSHTGLV++ FY M YG
Sbjct: 440 IGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYG 499
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
++P KHY C+VD+LGR+G L++A ++ MP P + WGALLGAC+++ LAE A
Sbjct: 500 IVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMAC 559
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ E+EP N G +VLLSN+YA SG+W +VS++R MR G+KK G S +E+ +H F
Sbjct: 560 TRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 619
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE-KEHMLRYHSEKLAVA 717
GD HP +++Y L E+ KLK +G+ VL + EEE KE L HSEKLA+
Sbjct: 620 LSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAIC 679
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
YG++S A + IRV+KNLR+C DCH K IS++ R II+RD RFHHF G CSC D+
Sbjct: 680 YGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDF 739
Query: 778 W 778
W
Sbjct: 740 W 740
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 158/326 (48%), Gaps = 14/326 (4%)
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-- 404
I + + +AR +FD +PQ + +W +I YA S+ F++M +
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N+ F ++ A ++SL LG+ LHG +K + FV N+L+ Y CG ++ A F
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 191
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
I +KDV+SWN+MI G+ + G AL LF+ M++ +K +TMVG+LSAC+ +E
Sbjct: 192 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 525 KGTEY--FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
G + NR V N M+D+ + G +++A+ L M E D TW +L
Sbjct: 252 FGRRVCSYIEENR---VNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTML 307
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM---RDRG 639
Y +E E A EV+ M ++ + L + Y +G+ + V ++ ++
Sbjct: 308 DG---YAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIK 364
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLH 665
+ ++T S L +V +G +H
Sbjct: 365 LNQITLVSTLSACAQVGALELGRWIH 390
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 169/330 (51%), Gaps = 26/330 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N++I Y G LD A +VF + ++D+VSWN MI+G+V+ S A LF+ M DV
Sbjct: 172 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 231
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEEACM 206
V+ +LS A+ + RR+ +E+N ++ N +L Y + G IE+A
Sbjct: 232 ASHVTMVGVLSACAKIRDLEFGRRVCS-YIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 290
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
LF++ + V+W +++ G+ + A+ + + MP +D V+WN +I+ Y QN EA
Sbjct: 291 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEA 350
Query: 267 QRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMI 316
+F E ++ + T + +S Q G ++ R I + +KN + N A+I
Sbjct: 351 LLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYI-KKNGIKMNFYVTSALI 409
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----I 372
Y + ++ ARE+F ++ ++V W+ MI G A G + A ++F +M + + +
Sbjct: 410 HMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGV 469
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMK-RYG 401
++ + + +G +++ LF +M+ YG
Sbjct: 470 TFTNVFCACSHTGLVDEAESLFYKMESSYG 499
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 163/386 (42%), Gaps = 60/386 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K A D+ N I + G DSA VF ++ + VS+N+MI+G++ G D A +
Sbjct: 161 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 220
Query: 114 VFDQMPQRD---------------------------------------LVSWNVMISGYV 134
+F +M D L N M+ Y
Sbjct: 221 LFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYT 280
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
+ S+ A+ LF+ M ++D V+W TML GYA + +AAR + + M +K+ ++WN L++A
Sbjct: 281 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISA 340
Query: 195 YVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
Y QNG+ EA ++F + ++ S + + L +WI + ++ +
Sbjct: 341 YEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIK-KNGIK 399
Query: 250 WNTMITG-----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
N +T Y++ L +A+ +F +DVF W+AM+ G +G EA +F M
Sbjct: 400 MNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKM 459
Query: 305 PEKNT----VSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGE 355
E N V++ + T +D A LF M + ++ +SG
Sbjct: 460 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGY 519
Query: 356 ITHARNLFDRMPQHDCIS-WAAIIAG 380
+ A + MP S W A++
Sbjct: 520 LEKAVKFIEAMPIPPSTSVWGALLGA 545
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 149/314 (47%), Gaps = 24/314 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + G + A +F++M + +V++ M+ GY ++ + AR+V + MP++D+V
Sbjct: 273 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIV 332
Query: 125 SWNVMISGYVRNKSLSAARNLF-EMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDR 179
+WN +IS Y +N + A +F E+ ++++ ++ + LS AQ G + R I
Sbjct: 333 AWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHS- 391
Query: 180 MLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
++KN I N L+ Y + G +E+A +F S +V W++++GG +
Sbjct: 392 YIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSE 451
Query: 235 AKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAP-----VKDVFTWTAMV 285
A +F +M + V++ + + + EA+ LF + V + + +V
Sbjct: 452 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIV 511
Query: 286 SGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG---YVQTKRMDMARELFEAMTCKNVA 341
++G +++A +AMP +T W A++ + +MA + +N
Sbjct: 512 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDG 571
Query: 342 SWNTMITGYAQSGE 355
+ + YA+SG+
Sbjct: 572 AHVLLSNIYAKSGK 585
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 266/732 (36%), Positives = 397/732 (54%), Gaps = 77/732 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQL----------- 108
++ WN I+ +G A +F MP R SVS+N+M+SGY NG+L
Sbjct: 69 NVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLG 128
Query: 109 -------------------------------------DPARQVFDQMPQRDLVSWNVMIS 131
D A++VF + P L WN MI
Sbjct: 129 YLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIY 188
Query: 132 GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEIS 187
GY + S+ A LF MP+RD VSWNTM+S +Q+G+ F M N ++
Sbjct: 189 GYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMT 248
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWE----VVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ +L+A +E L E V + L+ + K RL A+ +FD +
Sbjct: 249 YASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLT 308
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPV-KDVFTWTAMVSGY------VQNGK 293
+ VSW ++I G AQ + EA LF E PV D FT A V G + G+
Sbjct: 309 EHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFT-LATVLGVCLSQKDISIGE 367
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
A I + V+ NA++ Y + + A FE M +++ SW MIT ++Q+
Sbjct: 368 QLHAHTITRGLDSSVPVA-NALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQA 426
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ AR FD+MP+ + ISW +++A Y Q GY E+ L+++I+M R G + + F++ +
Sbjct: 427 GDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSI 486
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S CA+LA L LG Q+ Q K+GF + V N+++ MY +CG +EEA F IV K+++
Sbjct: 487 SACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLV 546
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWN M+AGYA++G G+ + +FE M +G PD I+ V +LS CSH+G V +G YF SM
Sbjct: 547 SWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSM 606
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+D+G+ P S+H+ CMVDLLGRAG+L++A+NL+ MPF+P+AA WGALL ACR++G T+L
Sbjct: 607 TKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKL 666
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
AE A + + E++ E G Y LL+N+Y+ SG+ V+ VR MRD+GV+K G SW+EV N
Sbjct: 667 AELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDN 726
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+VH F+V DT HP+ ++++ L++ +V + H YHSEK
Sbjct: 727 RVHVFTVDDTNHPQ-------IKDVHRMLEEIIKKIEEIKNYANVMNSGRSH--NYHSEK 777
Query: 714 LAVAYGILSIPA 725
LAV ++S+PA
Sbjct: 778 LAVPLRLISLPA 789
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 142/559 (25%), Positives = 251/559 (44%), Gaps = 96/559 (17%)
Query: 137 KSLSAARNLFE----MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
+S+ AR L M K + N +L+ Y+ G A R+F ++ N SWN ++
Sbjct: 18 RSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMI 77
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL-------GDAKWIFDRMPVR 245
+ + +G++ EA LFE + VSWNS+M G+ L G ++ + +
Sbjct: 78 SGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLH 137
Query: 246 ----------DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
D +++ Y + + AQ++F P +F W +M+ GY + G V
Sbjct: 138 GFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVK 197
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQ--------TKRMDMARELFE--AMT--------- 336
+A +F MPE++TVSWN MI+ Q ++M + F +MT
Sbjct: 198 KALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACT 257
Query: 337 --------------------CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
C +V + +I YA+ G + AR +FD + +H+ +SW +
Sbjct: 258 SIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTS 317
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I G AQ+G+ E++L LF +M+ ++ +VL C + + +G+QLH + G
Sbjct: 318 LIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRG 377
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFE------------------------------- 465
++ V NAL+ MY KCG V +A HAFE
Sbjct: 378 LDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFD 437
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
++ +++VISWN+M+A Y + G+ ++ L ++ M G+K D IT +SAC+ ++
Sbjct: 438 KMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLIL 497
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G + + G N +V + R G+++EAQ + ++ + + +W A++
Sbjct: 498 GNQILAQAEK-LGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMK-NLVSWNAMMAG- 554
Query: 586 RLYGKTELAEKAAEVIFEM 604
Y + K E+ +M
Sbjct: 555 --YAQNGQGRKVIEIFEKM 571
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 184/443 (41%), Gaps = 84/443 (18%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+F +++ Y G + +A +F + N SWN MI+G+ + +M A +LFE M
Sbjct: 39 IFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPE 98
Query: 338 KNVASWNTMITGYAQSGEIT---------------------------------------- 357
++ SWN+M++GY +GE+
Sbjct: 99 RDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDM 158
Query: 358 --------HARNLFDRMPQHDCISWAAIIAGY---------------------------- 381
A+ +F R P W ++I GY
Sbjct: 159 YIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMI 218
Query: 382 ---AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+Q G+ ++L F+EM G R N + SVLS C ++ LE G LH ++V++
Sbjct: 219 SILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPC 278
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+ G L+ MY KCG +E A F+ + + + +SW ++I G A+ GF ++AL+LF M
Sbjct: 279 LDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQM 338
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
+ V + D T+ +L C + G E ++ G+ + +V + + G
Sbjct: 339 REVPVASDQFTLATVLGVCLSQKDISIG-EQLHAHTITRGLDSSVPVANALVTMYAKCGD 397
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
+ +A + + MP D +W A++ A G EKA E +M N + +
Sbjct: 398 VWKANHAFELMPIR-DIISWTAMITAFSQAGDV---EKAREYFDKMPERNVISWNSMLAT 453
Query: 619 YAASGRWGDVSKVRLKMRDRGVK 641
Y G W + KV ++M GVK
Sbjct: 454 YMQRGYWEEGLKVYIQMLREGVK 476
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 132/284 (46%), Gaps = 26/284 (9%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F + CA+L S+ + ++LH QL+ +G ++ F+ N LL MY CG + +AY F I+
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+V SWNTMI+G+A G ++A LFE M + D ++ ++S H G +E +
Sbjct: 67 FPNVYSWNTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATIK 122
Query: 529 --------------YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ ++ D+G+ ++ T ++D+ + G +D AQ + P P
Sbjct: 123 ASGSLGYLKLALQLHGFAEKFDFGI--DTCVETSVLDMYIKCGAMDFAQKVFCRTP-NPS 179
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
W +++ YG +KA E+ +M + + + ++ + G + L+
Sbjct: 180 LFCWNSMIYGYSKYGSV---KKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLE 236
Query: 635 MRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
M ++G + +T S L ++ G LH R+ L+
Sbjct: 237 MWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLD 280
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 256/743 (34%), Positives = 386/743 (51%), Gaps = 85/743 (11%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
Q DL + + + AR LF +PK D+ +N ++ G++ + A + +
Sbjct: 37 QHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPDASSIS-FYTH 95
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEAC-MLFESKA-----NWEVVSWNSLMGGFVKQKRLG 233
+L+ +S + A+ + ++ M + A + + ++L+ + K R+
Sbjct: 96 LLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVA 155
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--------------- 278
A+ +FD+MP RD V WNTMITG +N ++ ++F++ + V
Sbjct: 156 YARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVA 215
Query: 279 ------------------------FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
+ T ++S + + VD AR++F + + + VS+NA
Sbjct: 216 EMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNA 275
Query: 315 MIAGYVQTKRMDMARELF-EAMTCKNVASWNTMI-------------------------- 347
+I+G+ + A + F E + S +TM+
Sbjct: 276 LISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSG 335
Query: 348 ------------TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
T Y++ EI AR LFD + +W A+I+GYAQSG +E ++ LF
Sbjct: 336 TILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQ 395
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM N TS+LS CA L +L GK +H + E +V AL+ MY KCG
Sbjct: 396 EMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCG 455
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
++ EA F+ +K+ ++WNTMI GY HG+G +AL LF M +G +P +T + +L
Sbjct: 456 NISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLY 515
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH GLV +G E F++M Y + P ++HY CMVD+LGRAG+L++A ++ MP EP
Sbjct: 516 ACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGP 575
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
A WG LLGAC ++ T LA A+E +FE++P N G YVLLSN+Y+ + + VR +
Sbjct: 576 AVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAV 635
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+ R + K G + +EV H F GD H + IYA LEEL K+++ G+ T L
Sbjct: 636 KKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTAL 695
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HDV EEEKE M HSEKLA+A+G+++ G IR++KNLRVC DCH A K ISKI R+
Sbjct: 696 HDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERV 755
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I++RD NRFHHF G CSCGDYW
Sbjct: 756 IVVRDANRFHHFKDGICSCGDYW 778
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 173/393 (44%), Gaps = 55/393 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
+A++ Y ++ AR+VFD+MP RD V WN MI+G VRN + +F+ M +
Sbjct: 142 SALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201
Query: 153 -DVVSWNTMLSGYAQN----------------GY-------------------ADAARRI 176
D + T+L A+ G+ D AR +
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLL 261
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFVKQKRLGDA 235
F + + + +S+N L++ + NG E A F E + + VS ++++G G
Sbjct: 262 FGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHL 321
Query: 236 K-------WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+ + + T Y++ N + A++LF+E+ K V W AM+SGY
Sbjct: 322 HLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGY 381
Query: 289 VQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-- 342
Q+G + A +F M N V+ ++++ Q + + + + + KN+
Sbjct: 382 AQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNI 441
Query: 343 --WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
+I YA+ G I+ A LFD + + ++W +I GY GY +++L+LF EM
Sbjct: 442 YVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHL 501
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
G + + F SVL C++ + G ++ +V
Sbjct: 502 GFQPSSVTFLSVLYACSHAGLVREGDEIFHAMV 534
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 53/250 (21%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG----- 132
D A +F+ ++ ++NAMISGY +G + A +F +M + V I+
Sbjct: 357 DLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSAC 416
Query: 133 ----------------------------------YVRNKSLSAARNLFEMMPKRDVVSWN 158
Y + ++S A LF++ +++ V+WN
Sbjct: 417 AQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWN 476
Query: 159 TMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
TM+ GY +GY D A ++F+ ML + + +++ +L A G + E +F + N
Sbjct: 477 TMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNK 536
Query: 215 EVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITG--YAQNNYLAE- 265
+ + ++ + +L A +MPV W T++ ++ LA
Sbjct: 537 YRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARV 596
Query: 266 -AQRLFEEAP 274
++RLFE P
Sbjct: 597 ASERLFELDP 606
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/571 (41%), Positives = 353/571 (61%), Gaps = 13/571 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ----NNYLAEAQRLFEEAPV 275
N+L+ + K + A +FD MP RD VSW +++T + + L+ +F +
Sbjct: 42 NTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGL 101
Query: 276 K-DVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+ D F + +V GY++ GK AR + + V +++I Y + + D AR
Sbjct: 102 QPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK-SSLIDMYTKCGQPDDAR 160
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+F+++ KN SW +MI+GYA+SG A +LF + P + SW A+I+G QSG+
Sbjct: 161 AVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIY 220
Query: 390 SLRLFIEMKRYG-ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
S LF EM+R G + ++ +SV+ CANLA LELGKQ+HG ++ +GFE+ F+ NAL+
Sbjct: 221 SFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALV 280
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KC + A F + KDVISW ++I G A+HG ++AL L++ M IKP+++
Sbjct: 281 DMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEV 340
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T VG+L ACSH GLV +G E F SM DY + P+ +HYTC++DLL R+G LDEA+NL+
Sbjct: 341 TFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDK 400
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
+PF+PD TW +LL AC + E+ + A+ + +++PE+ Y+LLSN+YA + WG V
Sbjct: 401 IPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSV 460
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGF 687
SKVR M V+K GYS ++ F G++ HP K+ I L++L+ ++++ G+
Sbjct: 461 SKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGY 520
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V +T VL+D+ ++EKE L +HSE+LAVAYG+L G IR++KNLR+C DCHN +K
Sbjct: 521 VPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKF 580
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS IV R I++RD R+HHF G CSC D+W
Sbjct: 581 ISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 184/437 (42%), Gaps = 100/437 (22%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW--------------------NVM 129
+SS+ N ++ Y G + A Q+FD+MP RD VSW N M
Sbjct: 36 KSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTM 95
Query: 130 IS---------------------GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
+ GY+R AR + +VV ++++ Y + G
Sbjct: 96 FTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK-SSLIDMYTKCG 154
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
D AR +FD +L KN +SW +++ Y ++GR EA LF + SW +L+ G ++
Sbjct: 155 QPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQ 214
Query: 229 QKRLGDAKWIFDRM-----PVRDEVSWNTMITG--------------------------- 256
+ +F+ M + D + ++++ G
Sbjct: 215 SGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLF 274
Query: 257 --------YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP--- 305
YA+ + + A+ +F P KDV +WT+++ G Q+GK +EA ++D M
Sbjct: 275 ISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSR 334
Query: 306 -EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHA 359
+ N V++ ++ + RELF +MT ++ + ++ ++SG + A
Sbjct: 335 IKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394
Query: 360 RNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
NL D++P + D +WA++++ + E +R+ R + P T +L
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI---ADRVLDLKPEDPSTYIL----- 446
Query: 419 LASLELGKQLHGQLVKV 435
L+++ G ++ G + KV
Sbjct: 447 LSNVYAGAEMWGSVSKV 463
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+N S F L CA S +LH Q++K GF+ + N LL +Y KCG + +A
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F+E+ ++D +SW +++ + + + L + +M T G++PD I+ ACS G
Sbjct: 61 FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120
Query: 523 VEKGTE----YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
+ G + + S D V+ +S ++D+ + G+ D+A+ + ++ F+ ++ +W
Sbjct: 121 LRLGKQVHARFMLSFFCDDEVVKSS-----LIDMYTKCGQPDDARAVFDSILFK-NSVSW 174
Query: 579 GALLGA 584
+++
Sbjct: 175 TSMISG 180
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 58/312 (18%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-- 121
W I+ + R+G A+ +F P R+ S+ A+ISG + +G + +F++M +
Sbjct: 174 WTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGI 233
Query: 122 DLVS--------------------------------------WNVMISGYVRNKSLSAAR 143
D+V N ++ Y + + AA+
Sbjct: 234 DIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAK 293
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNG 199
++F MP++DV+SW +++ G AQ+G A+ A ++D M ++ NE+++ GLL A G
Sbjct: 294 DIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAG 353
Query: 200 RIEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTM 253
+ LF S N + + L+ + L +A+ + D++P + DE +W ++
Sbjct: 354 LVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASL 413
Query: 254 ITGYAQNNYLAE----AQRLFEEAPVKDVFTWTAMVSGYVQN---GKVDEARMIFDAMPE 306
++ ++N L A R+ + P +D T+ + + Y G V + R + +M
Sbjct: 414 LSACMRHNNLEMGVRIADRVLDLKP-EDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEV 472
Query: 307 KNTVSWNAMIAG 318
+ ++++ G
Sbjct: 473 RKEPGYSSIDFG 484
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/677 (35%), Positives = 385/677 (56%), Gaps = 53/677 (7%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D+ +++ Y + SL+ AR +F+ MP R V +WN+M+S Y+ + + A IF RM
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103
Query: 182 EKNE----ISWNGLLAAYV-----QNGR-IEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
+ E +++ +L A V Q+G+ + E+ + E+ ++ +L+ + + +
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRES--ISETSFELDLFVGTALITMYARCRS 161
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSG 287
+A +F RM ++ ++W+ +IT +A + + EA R F +E + + T+ ++++G
Sbjct: 162 PENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNG 221
Query: 288 YVQNGKVDEARMIFDAMPE----KNTVSWNAMIA--GYVQTKRMDMARELFEAMTCKNVA 341
+ ++E I + E T NA++ G +T +D+A + + M + +
Sbjct: 222 FTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQIT 281
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+WN +I GY G S ++L + ++
Sbjct: 282 AWNVLINGYTLHGR-------------------------------SREALETYQRLQLEA 310
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+++ F SVL+ C + SL GK +H V+ G ++ V NAL MY KCGS+E A
Sbjct: 311 IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 370
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + + +SWN M+ YA+HG ++ L L M+ G+K + IT V +LS+CSH G
Sbjct: 371 RIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 430
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
L+ +G +YF+S+ D G+ ++HY C+VDLLGRAG+L EA+ + MP EP+ TW +L
Sbjct: 431 LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASL 490
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++ + + AA + E++P N+ V+LSN+Y+ G W + +K+R M R VK
Sbjct: 491 LGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVK 550
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
KV G S ++V+NKVH F V DT HP IY +EEL F +++ G+V TK+VLHDV EE
Sbjct: 551 KVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEE 610
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
+KE +L YHSEKLA+A+G++S P + + KNLRVCEDCH A K ISKI GR I++RDN
Sbjct: 611 QKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDN 670
Query: 762 NRFHHFSGGSCSCGDYW 778
+RFHHF GSCSC DYW
Sbjct: 671 HRFHHFRDGSCSCKDYW 687
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 207/451 (45%), Gaps = 38/451 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DL 123
+ T+ + G A VF+ MP RS ++N+MIS Y ++ + A +F +M D
Sbjct: 52 VNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDR 111
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDR 179
V++ ++ V ++L +++ E + + D+ +++ YA+ + A ++F R
Sbjct: 112 VTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGR 171
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDA 235
M +KN I+W+ ++ A+ +G EA F + V++ SL+ GF L +
Sbjct: 172 MKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL 231
Query: 236 KWIFDRMPVRDEVSWNTM------ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
I + TM + G + L A+ + +E + + W +++GY
Sbjct: 232 SRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYT 291
Query: 290 QNGKVDEA-----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC---KNVA 341
+G+ EA R+ +A+P + + A T + A+ C +V
Sbjct: 292 LHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVI 351
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N + Y++ G + +AR +FD MP +SW ++ YAQ G SE+ L+L +M++ G
Sbjct: 352 VKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG 411
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQL-----HGQLVKVGFEA-GCFVGNALLVMYCKCG 455
+LN F SVLS+C++ + G Q H + ++V E GC V + + G
Sbjct: 412 VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVD-----LLGRAG 466
Query: 456 SVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
++EA ++ + ++++W +++ H
Sbjct: 467 KLQEAEKYISKMPSEPEIVTWASLLGACRVH 497
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 201/426 (47%), Gaps = 47/426 (11%)
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
++ G+ +C+ ES+ + +V +L+ + K L DA+ +FD MP R +WN+MI+
Sbjct: 26 LRKGKFIHSCVR-ESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMIS 84
Query: 256 GYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK---- 307
Y+ + EA QR+ E D T+ +++ V + + + +++ E
Sbjct: 85 AYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFEL 144
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ A+I Y + + + A ++F M KN+ +W+ +IT
Sbjct: 145 DLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIIT------------------- 185
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+A G+ ++LR F M++ G NR F S+L+ + LE +
Sbjct: 186 ------------AFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR 233
Query: 428 LHGQLVKVGFEAGCFVGNALLVMY--CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+H + + G + + NAL+ +Y C+ G ++ A +E+ ++ + +WN +I GY H
Sbjct: 234 IHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLH 293
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G ++AL ++ ++ I D +T + +L+AC+ + + +G + +S + G+ +
Sbjct: 294 GRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIV 352
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ ++ + G ++ A+ + +MP A +W +L A +G++ E+ ++I +ME
Sbjct: 353 KNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQAYAQHGES---EEVLKLIRKME 408
Query: 606 PENAGM 611
E +
Sbjct: 409 QEGVKL 414
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 146/340 (42%), Gaps = 49/340 (14%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQMP 119
W+ IT +G C AL F M + + V++ ++++G+ L+ ++ +
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239
Query: 120 QRDLVSWNVM------ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+ L M + G L A + + M ++ + +WN +++GY +G + A
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299
Query: 174 RRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSLMGG 225
+ R+ + +++++ +L A + + E M+ E + +V+ N+L
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNM 359
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTW 281
+ K + +A+ IFD MP+R VSWN M+ YAQ+ E +L E+ VK + T+
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITF 419
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
+++S G + E F ++ + V+T+
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSLGHDRGIE--------VKTEH----------------- 454
Query: 342 SWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ ++ ++G++ A +MP + + ++WA+++
Sbjct: 455 -YGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 19/256 (7%)
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
G + N F +VL++ + +L GK +H + + FV AL+ Y KCGS+ +A
Sbjct: 5 GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F+ + + V +WN+MI+ Y+ +A +F+ M+ G + D +T + IL AC +
Sbjct: 65 RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124
Query: 521 GLVEKG-------TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
++ G +E + ++ G T ++ + R + A + M +
Sbjct: 125 ENLQHGKHVRESISETSFELDLFVG--------TALITMYARCRSPENAAQVFGRMK-QK 175
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFE--MEPENAGMYVLLSNLYAASGRWGDVSKV 631
+ TW A++ A +G A + ++ + + P LL+ SG ++S++
Sbjct: 176 NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSG-LEELSRI 234
Query: 632 RLKMRDRGVKKVTGYS 647
L + + G+ T S
Sbjct: 235 HLLITEHGLDDTTTMS 250
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQ 113
+ I WNV I + +G AL + + + V++ ++++ + L +
Sbjct: 277 EQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKM 336
Query: 114 VFDQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ + D++ N + + Y + S+ AR +F+ MP R VSWN ML YAQ+G
Sbjct: 337 IHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGE 396
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKAN---WEVVS--WN 220
++ ++ +M ++ N I++ +L++ G I E C F S + EV + +
Sbjct: 397 SEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYG 456
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDE-VSWNTMI 254
L+ + +L +A+ +MP E V+W +++
Sbjct: 457 CLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLL 491
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/660 (38%), Positives = 379/660 (57%), Gaps = 22/660 (3%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAA 194
L A ++FE + + +++ WNTM G+A + +A +++ M+ N ++ LL +
Sbjct: 53 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKS 112
Query: 195 YVQNGRIEEACMLFES--KANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+ +E + K +E+ + SL+ +VK R DA +FD RD VS+
Sbjct: 113 CAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSY 172
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------ 304
+ITGYA Y+ AQ++F+E PVKDV +W A++SGY G EA +F M
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHAR 360
P+++T+ +++ Q+ + + R++ + N+ N +I Y++ GE+ A
Sbjct: 233 PDESTMV--TVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETAC 290
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LF + D ISW +I GY +++L LF EM R GE N S+L CA L
Sbjct: 291 GLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLG 350
Query: 421 SLELGKQLHGQLVK--VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+++ G+ +H + K G + +L+ MY KCG +E A+ F + + + + N M
Sbjct: 351 AIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAM 410
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I G+A HG A +F M+ GI+PDDIT VG+LSACSH+G+++ G F SM ++Y
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYK 470
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P +HY CM+DLLG G EA+ ++ M EPD W +LL AC+++G EL E A
Sbjct: 471 ITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFA 530
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + ++EPEN G YVLLSN+YA +GRW +V+ +R + D+G+KKV G S +E+ + VH F
Sbjct: 531 QKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEF 590
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
+GD HP IY LEE+E L++ GFV T VL ++ EE K+ LR+HSEKLA+A+
Sbjct: 591 IIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAF 650
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G++S G + ++KNLRVC +CH A K ISKI R II RD RFHHF G CSC DYW
Sbjct: 651 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 194/404 (48%), Gaps = 28/404 (6%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ D+ I+ +++NG A VF+ R VSY A+I+GY G ++ A+++FD+
Sbjct: 135 ELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDE 194
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAA 173
+P +D+VSWN +ISGY + A +LF+ M K +V + T++S AQ+G
Sbjct: 195 IPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLG 254
Query: 174 RRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R++ D L N N L+ Y + G +E AC LF+ +N +V+SWN+++GG+
Sbjct: 255 RQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHL 314
Query: 230 KRLGDAKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQ--RLFEEAPVKDVFTW-- 281
+A +F M E V+ +++ AQ + + ++ + +K V
Sbjct: 315 NLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASS 374
Query: 282 --TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
T+++ Y + G ++ A +F++M + + NAMI G+ R + A ++F M
Sbjct: 375 LRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNG 434
Query: 340 V----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
+ ++ +++ + SG + R +F M Q+ I+ + Y L LF
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKIT--PKLEHYGCMIDLLGHLGLFK 492
Query: 396 EMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
E + + P + S+L C ++ELG+ +L+K+
Sbjct: 493 EAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKI 536
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/502 (45%), Positives = 329/502 (65%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
DV +A + Y G+V+ AR + + + +NAMI GY++ ++ A+ELF +M
Sbjct: 164 DVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSME 223
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
KNV SWN M++G A+ G I AR LF+ M + + ISW+A+I GY + GY +++L +F
Sbjct: 224 DKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNV 283
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+R R + +SVL+ CANL +L+ G+ +H + +G AL+ MY KCG
Sbjct: 284 MQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGR 343
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
++ A+ FE++ K+V +WN MI G HG +DA+ LF M+ +P+ IT++G+LSA
Sbjct: 344 LDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSA 403
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C+H+G+V++G F SM YG+ P +HY C+VDLLGRAG L EA+ +M +MP EP AA
Sbjct: 404 CAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAA 463
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
WGALLGACR +G EL E+ +++ E+EP+N+G Y LLSN+YA +GRW DV+ VR M+
Sbjct: 464 VWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMK 523
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
+RGVK TG S ++ VH F +GD HP+ IY L+ + +LK +GF +T VL
Sbjct: 524 ERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLF 583
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
D+ EEEKE L+YHSEKLA+A+G+++ G I V+KNLR+CEDCH+A K IS++ R I
Sbjct: 584 DIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREI 643
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
I+RD R+HHF G+CSC D+W
Sbjct: 644 IVRDRARYHHFKTGTCSCKDFW 665
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 18/316 (5%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+A I Y G+++ AR++ + D++ +N MI GY++ + AA+ LF M ++V
Sbjct: 169 SAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVG 228
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
SWN M+SG A+ G + AR +F+ M EKNEISW+ ++ Y++ G +EA +F E
Sbjct: 229 SWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREE 288
Query: 216 V----VSWNSLMGGFVKQKRLGDAKWIF----DRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ +S++ L +WI + D V ++ YA+ L A
Sbjct: 289 IRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAW 348
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTK 323
+FE+ K+VFTW AM+ G +G+ ++A +F M ++ N ++ +++ +
Sbjct: 349 DVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSG 408
Query: 324 RMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAI 377
+D +F +M + + ++ ++G + A + MP + W A+
Sbjct: 409 MVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGAL 468
Query: 378 IAGYAQSGYSEDSLRL 393
+ + G E R+
Sbjct: 469 LGACRKHGDVELGERV 484
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 14/263 (5%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
+GD IR + I + G + A + + +NAMI GYL G+++ A+++F
Sbjct: 162 SGDVHIR--SAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELF 219
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
M +++ SWNVM+SG + + AR LF M +++ +SW+ M+ GY + GY A
Sbjct: 220 WSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALE 279
Query: 176 IFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFV 227
+F+ M + + + +LAA G +++ + + +++ V +L+ +
Sbjct: 280 VFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYA 339
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTA 283
K RL A +F++M ++ +WN MI G + +A LF + + T
Sbjct: 340 KCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLG 399
Query: 284 MVSGYVQNGKVDEARMIFDAMPE 306
++S +G VDE IF++M E
Sbjct: 400 VLSACAHSGMVDEGLRIFNSMEE 422
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 15/302 (4%)
Query: 345 TMITGYAQS--GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
T++ YA + A +F+ +P + + II G Q+ ++ + +M
Sbjct: 67 TLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHA 126
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
R N+ + ++ C + E G Q+H ++K G + +A + MY G VE A
Sbjct: 127 RPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARR 186
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
E + DVI +N MI GY + G + A LF SM+ + ++ MV ++ C G+
Sbjct: 187 MLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNV-MVSGMAKC---GM 242
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ---NLMKNMPFEPDAATWG 579
+E+ E F M N ++ M+D + G EA N+M+ P
Sbjct: 243 IEEARELFNEMKE-----KNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLS 297
Query: 580 ALLGACRLYGKTELAE-KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
++L AC G + A V +A + L ++YA GR V KM +
Sbjct: 298 SVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKK 357
Query: 639 GV 640
V
Sbjct: 358 EV 359
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/726 (35%), Positives = 394/726 (54%), Gaps = 86/726 (11%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA 194
+ A LF MP+++ VSWN +L+GYAQ G ++F +M E ++ + + +L
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 195 YVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
G + E +L S + SL+ + K + DA +F ++ D V+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 251 NTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSG------------------- 287
+ MITG Q + EA LF + + FT +++VS
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 288 ----------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
Y+++ V++ +F+AM + VSWNA+++G+ ++ +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 332 FEAM-----------------TCKNVAS----------------------WNTMITGYAQ 352
F M +C ++ ++ YA+
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
+ + A FDR+ D SW II+GYAQ+ +E +++ F +M+R G + N S
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASC 360
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
LS C+++A+LE G+QLH VK G FVG+AL+ +Y KCG +E A F+ ++ +D+
Sbjct: 361 LSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDI 420
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWNT+I+GY++HG G+ AL F M + GI PD+ T +G+LSACS GLVE+G + F S
Sbjct: 421 VSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDS 480
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M++ YG+ P+ +HY CMVD+LGRAG+ +E + ++ M P + W +LGAC+L+G +
Sbjct: 481 MSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVD 540
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
EKAA+ +FEMEP Y+LLSN++A+ GRW DV +R M RG+KK G SW+EV
Sbjct: 541 FGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVD 600
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
+VH F D HP+ IYA L++L L G+V T++VLH+V +EK L YHSE
Sbjct: 601 GQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSE 660
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
+LA+++ +LS A +PIR+ KNLR+CEDCH+ +K IS I + I++RD RFHHF G+C
Sbjct: 661 RLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTC 720
Query: 773 SCGDYW 778
SC D W
Sbjct: 721 SCQDRW 726
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 204/481 (42%), Gaps = 68/481 (14%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
V +++ RS + + L++ G + A +VF ++ D+V+W+ MI+G +
Sbjct: 72 VLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQG 131
Query: 138 SLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWN 189
A LF +M ++ + + ++++S G + I + E + + N
Sbjct: 132 HGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSN 191
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR---- 245
L+ Y+++ +E+ +FE+ N ++VSWN+L+ GF + G IF +M +
Sbjct: 192 PLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKP 251
Query: 246 -----------------------------------DEVSWNTMITGYAQNNYLAEAQRLF 270
D+ ++ YA+ L +A F
Sbjct: 252 NMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAF 311
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMD 326
+ +D+F+WT ++SGY Q + ++A F M + N + + ++G ++
Sbjct: 312 DRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLE 371
Query: 327 MARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
R+L A+ K ++ + ++ Y + G + HA +F + D +SW II+GY
Sbjct: 372 NGRQL-HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGY 430
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAG 440
+Q G E +L F M G + + F VLS C+ + +E GK+ + K+ G
Sbjct: 431 SQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPS 490
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG---FG-KDALMLF 495
++ + + G E EE+ + + W T++ HG FG K A LF
Sbjct: 491 IEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLF 550
Query: 496 E 496
E
Sbjct: 551 E 551
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 195/445 (43%), Gaps = 77/445 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS----VSYNAMISGYLLNGQLDPARQVF 115
D+ W+ IT + G A +F+ M R+ + + ++++S G L + +
Sbjct: 116 DVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIH 175
Query: 116 DQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + D + N +I Y++++ + +FE M D+VSWN +LSG+ +
Sbjct: 176 GCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCG 235
Query: 172 AARRIFDRML----EKNEISWNGLLAAYV-----QNGRIEEACMLFESKANWEVVSWNSL 222
RIF +ML + N ++ +L + + G+ A ++ S + + V +L
Sbjct: 236 RGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVG-TAL 294
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE---------- 272
+ + K + L DA FDR+ RD SW +I+GYAQ + +A + F +
Sbjct: 295 VDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNE 354
Query: 273 ------------------------APVK-----DVFTWTAMVSGYVQNGKVDEARMIFDA 303
VK D+F +A+V Y + G ++ A IF
Sbjct: 355 YTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKG 414
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHA 359
+ ++ VSWN +I+GY Q + + A E F M + + A++ +++ + G +
Sbjct: 415 LISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEG 474
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT---- 410
+ FD M + I+ +A ++ ++G F E+K + E +N +P++
Sbjct: 475 KKRFDSMSKIYGINPSIEHYACMVDILGRAGK-------FNEVKIFIEEMNLTPYSLIWE 527
Query: 411 SVLSTCANLASLELGKQLHGQLVKV 435
+VL C +++ G++ +L ++
Sbjct: 528 TVLGACKLHGNVDFGEKAAKKLFEM 552
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 23/263 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
DI W V I+ + + + A+ F M R + + + +SG L+ RQ+
Sbjct: 318 DIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLH 377
Query: 116 DQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ D+ + ++ Y + + A +F+ + RD+VSWNT++SGY+Q+G +
Sbjct: 378 AVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGE 437
Query: 172 AARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKA-----NWEVVSWNSL 222
A F ML + +E ++ G+L+A G +EE F+S + N + + +
Sbjct: 438 KALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACM 497
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITGYAQNNYL----AEAQRLFEEAPVKD 277
+ + + + K + M + + W T++ + + A++LFE P+ D
Sbjct: 498 VDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMD 557
Query: 278 VFTWTAMVSGYVQNGKVDEARMI 300
++ + + + G+ D+ R I
Sbjct: 558 S-SYILLSNIFASKGRWDDVRNI 579
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/570 (40%), Positives = 349/570 (61%), Gaps = 12/570 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ----NNYLAEAQRLFEEAPV 275
N+L+ + K L DA ++FD MP RD VSW +++T Y Q N L+ +F +
Sbjct: 41 NTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRL 100
Query: 276 K-DVFTWTAMVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+ D F + ++ ++ GK AR + + + V ++++ Y + +AR
Sbjct: 101 QPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVK-SSLVDMYAKCGLPSIAR 159
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+F+++ K SW M++GYA+SG A LF R P + SW A+I+G QSGY D
Sbjct: 160 SVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCID 219
Query: 390 SLRLFIEMKRYG-ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+FIEM+R G + ++ +SV+ CANLA L LGKQ+HG ++ G+E+ F+ NAL+
Sbjct: 220 GCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALV 279
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KC + A + F ++ +DV+SW ++I G A+HG K+AL L++ M IKP+++
Sbjct: 280 DMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEV 339
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T VG++ ACSH GLV KG + F +M DY + P+ + +TC +DLL R+G L+EA++L+K
Sbjct: 340 TFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKT 399
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MP +PD TW ALL AC+ +G TE+ + A+ + + YVLLSN+YA +G+W +
Sbjct: 400 MPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQM 459
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
S+VR M D VK+ GYS +++ + F G+T HP KD I+ L+EL+ ++++ G++
Sbjct: 460 SRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYI 519
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T VLHD+ E+EKE L +HSE+ AVAYG+L G IR++KNLR+C DCH +K
Sbjct: 520 PDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLT 579
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S IV + II+RD R+HHF G CSC D+W
Sbjct: 580 SSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 201/476 (42%), Gaps = 77/476 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY----VRNKSLSAARNLF---EM 148
N ++ Y L A +FD+MPQRD VSW +++ Y + NK+LS +F +
Sbjct: 41 NTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRL 100
Query: 149 MPKR---------------------------------DVVSWNTMLSGYAQNGYADAARR 175
P D V ++++ YA+ G AR
Sbjct: 101 QPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARS 160
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+FD +L K +SW +L+ Y ++G +EA LF + SW +L+ G V+ D
Sbjct: 161 VFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDG 220
Query: 236 KWIFDRM-----PVRDEVSWNTMITGYAQNNYLAEAQRL--------FEEAPVKDVFTWT 282
++F M + D + ++++ A L +++ +E +F
Sbjct: 221 CYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESC----LFISN 276
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC----K 338
A+V Y + + AR +F+ M ++ VSW ++I G Q R A +L++ M
Sbjct: 277 ALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKP 336
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRL 393
N ++ +I + +G ++ R LF M + IS + + ++SG+ ++ L
Sbjct: 337 NEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDL 396
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF-EAGCFVGNALLVMYC 452
+K + + + ++LS C + + E+G ++ +L+ + E +V L +Y
Sbjct: 397 ---IKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYV--LLSNVYA 451
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
G E+ + + D +V GY+ GK++ +F + +T D+I
Sbjct: 452 GAGKWEQMSRVRKLMTDMEV----KRKPGYSSIDLGKES-QVFHAGETCHPMKDEI 502
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 30/363 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN----------GQLD 109
D W +T + + + L +F+ M + + + LL G+
Sbjct: 67 DHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQV 126
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
AR V D+V + ++ Y + S AR++F+ + + VSW MLSGYA++G
Sbjct: 127 HARFVLSPFVDDDVVK-SSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGL 185
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMG 224
D A +F R +N SW L++ VQ+G + C +F E + + +S++G
Sbjct: 186 KDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVG 245
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSW----NTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
LG K I + S N ++ YA+ + + A+ +F +DV +
Sbjct: 246 ACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVS 305
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
WT+++ G Q+G+ EA ++D M + N V++ +I + R+LF+AM
Sbjct: 306 WTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMI 365
Query: 336 ----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDS 390
++ + + ++SG + A +L MP D +WAA+++ G +E
Sbjct: 366 EDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMG 425
Query: 391 LRL 393
+R+
Sbjct: 426 VRI 428
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 157/361 (43%), Gaps = 59/361 (16%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
P D D+ + ++ + + + G A VF+S+ ++SVS+ AM+SGY +G D A ++
Sbjct: 134 PFVDDDVVKSSL-VDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMEL 192
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--DVVS---------------- 156
F + P R+L SW +ISG V++ +F M + D+V
Sbjct: 193 FLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAV 252
Query: 157 ----------------------WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
N ++ YA+ AAR +F+RML ++ +SW ++
Sbjct: 253 LGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVG 312
Query: 195 YVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS- 249
Q+GR +EA L++ E+ V++ L+ + + +F M +S
Sbjct: 313 AAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISP 372
Query: 250 ----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDA- 303
+ + +++ +L EA+ L + P K D TW A++S +G + I D
Sbjct: 373 SLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRL 432
Query: 304 ----MPEKNT-VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
M E +T V + + AG + ++M R+L M K ++++ G + ++ H
Sbjct: 433 LSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLG--KESQVFH 490
Query: 359 A 359
A
Sbjct: 491 A 491
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
K++H Q+VK G + N LL Y KC +++A++ F+E+ +D +SW +++ Y +
Sbjct: 21 AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80
Query: 485 HGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTE----YFYSMNRDYGV 539
L +F M T ++PD +L AC+ + G + + S D V
Sbjct: 81 AKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDV 140
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ +S +VD+ + G A+++ ++ + + +W A+L Y ++ L ++A E
Sbjct: 141 VKSS-----LVDMYAKCGLPSIARSVFDSILVK-TSVSWTAMLSG---YARSGLKDEAME 191
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
+ N + L + SG D + ++MR GV V
Sbjct: 192 LFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIV 235
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/775 (33%), Positives = 407/775 (52%), Gaps = 77/775 (9%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------DLVSWNVMISG 132
++L + S+P S + + G + G R V + +R DL NV+++
Sbjct: 46 TSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNM 105
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISW 188
Y + L++AR LF+ MP+R++VS+ T++ +AQ G +AA +F R+ E N+
Sbjct: 106 YGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVL 165
Query: 189 NGLLAAYVQ------NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+L + G + N V S L+ + + DA+ +F+ +
Sbjct: 166 TTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGS--GLIDAYSLCSLVSDAEHVFNGI 223
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--------------------FTWT 282
+D V W M++ Y++N+ A R + + +
Sbjct: 224 VRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGG 283
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------- 335
A++ Y + G + +AR+ F+ +P + + + MI+ Y Q+ + + A ELF +
Sbjct: 284 ALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLP 343
Query: 336 ----------TCKNVASW----------------------NTMITGYAQSGEITHARNLF 363
C N+ N ++ YA+ ++ + +F
Sbjct: 344 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 403
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
+ + +SW I+ G++QSG E++L +F EM+ + ++SVL CA+ AS+
Sbjct: 404 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 463
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
Q+H + K F +GN+L+ Y KCG + +A F+ ++++D+ISWN +I+GYA
Sbjct: 464 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 523
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
HG DAL LF+ M ++ +DIT V +LS C TGLV G F SM D+G+ P+
Sbjct: 524 LHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSM 583
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+HYTC+V LLGRAGRL++A + ++P P A W ALL +C ++ L +AE I E
Sbjct: 584 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 643
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDT 663
+EP++ YVLLSN+YAA+G V+ +R MR+ GV+KV G SW+E++ ++H FSVG
Sbjct: 644 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 703
Query: 664 LHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI 723
HP+ I A LE L K ++G++ +VLHDV +E+K ML HSE+LA+AYG++
Sbjct: 704 DHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMT 763
Query: 724 PAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P G PIR++KNLR C DCH A ISKIV R II+RD NRFHHF G CSCGDYW
Sbjct: 764 PPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/470 (47%), Positives = 307/470 (65%), Gaps = 4/470 (0%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
++I Y + ++ A ++F+ MT ++V+SWN ++ GY +SG I A +F+RMP + +
Sbjct: 173 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 232
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKR--YGERLNRSPFTSVLSTCANLASLELGKQLHG 430
SW +I+GY+QSG ++ +L LF EM + G R N SVL CA L++LE G+Q+H
Sbjct: 233 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 292
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV--DKDVISWNTMIAGYARHGFG 488
++G + V AL MY KCGS+ +A + F+++ +K++I+WNTMI YA +G G
Sbjct: 293 LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHG 352
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
A+ F M GI+PDDIT G+LS CSH+GLV+ G +YF M+ Y + P +HY C
Sbjct: 353 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYAC 412
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
+ DLLGRAGRL EA L+ MP + WG+LL ACR + E+AE AA +F +EPEN
Sbjct: 413 VADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPEN 472
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G YVLLSN+YA +GRW +V K+R ++ +G KK G SW+E+ K H F GDT HP+
Sbjct: 473 TGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQG 532
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
IY +LE L K+K G+ T VLHD+ EEEKE L HSEKLAVA+GIL+ PA
Sbjct: 533 KEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETV 592
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+RV KNLR+C DCH A+ IS+I GR +I+RD NRFHHF GG CSCGDYW
Sbjct: 593 LRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 163/335 (48%), Gaps = 35/335 (10%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G+++ A +VFD M RD+ SWN +++GY ++ + AA +FE MP R++VSW TM+SGY+
Sbjct: 183 GEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYS 242
Query: 166 QNGYADAARRIFDRMLEK------NEISWNGLLAAYVQNGRIEEACMLFESKA----NWE 215
Q+G A A +FD M+++ N ++ +L A Q +E + E N
Sbjct: 243 QSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSN 302
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE---VSWNTMITGYAQNNYLAEAQRLFEE 272
+L + K L DA+ FD++ R+E ++WNTMIT YA + +A F E
Sbjct: 303 ASVLIALTAMYAKCGSLVDARNCFDKLN-RNEKNLIAWNTMITAYASYGHGLQAVSTFRE 361
Query: 273 ---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV-------Q 321
A ++ D T+T ++SG +G VD F+ M T S N + Y +
Sbjct: 362 MIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM--STTYSINPRVEHYACVADLLGR 419
Query: 322 TKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEI----THARNLFDRMPQHDCISWAA 376
R+ A +L M S W +++ + + T AR LF P++ ++
Sbjct: 420 AGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTG-NYVL 478
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ YA++G ++ +L +K G + +SP S
Sbjct: 479 LSNMYAEAGRWQEVDKLRAIVKSQGTK--KSPGCS 511
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 146/284 (51%), Gaps = 22/284 (7%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ-----NGRIEEACMLFESKANW 214
M++ YA +G D++ +F+ + + ++ +L + V+ G+ ++ +
Sbjct: 111 MVAFYASSGDIDSSVSVFNGI--GDYFTFPFVLKSSVELLSVWMGKCVHG-LILRIGLQF 167
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
++ SL+ + K + DA +FD M +RD SWN ++ GY ++ + A +FE P
Sbjct: 168 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 227
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT------VSWNAMIAGYVQTKRMDMA 328
+++ +WT M+SGY Q+G +A +FD M ++++ V+ +++ Q ++
Sbjct: 228 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 287
Query: 329 RELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHD--CISWAAIIAGY 381
R++ E + C+ N + + YA+ G + ARN FD++ +++ I+W +I Y
Sbjct: 288 RQIHE-LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAY 346
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
A G+ ++ F EM + G + + FT +LS C++ +++G
Sbjct: 347 ASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 390
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 42/270 (15%)
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G HA L R Q + + ++A YA SG + S+ +F + Y F VL
Sbjct: 89 GHQVHAHMLL-RGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDYFT------FPFVL 141
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
+ L S+ +GK +HG ++++G + +V +L+++Y KCG + +A F+ + +DV
Sbjct: 142 KSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVS 201
Query: 474 SWNT-------------------------------MIAGYARHGFGKDALMLFESM--KT 500
SWN MI+GY++ G + AL LF+ M +
Sbjct: 202 SWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKED 261
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G++P+ +T++ +L AC+ +E+G + + + G+ N+ + + + G L
Sbjct: 262 SGVRPNWVTIMSVLPACAQLSTLERGRQ-IHELACRMGLNSNASVLIALTAMYAKCGSLV 320
Query: 561 EAQNLMKNMPF-EPDAATWGALLGACRLYG 589
+A+N + E + W ++ A YG
Sbjct: 321 DARNCFDKLNRNEKNLIAWNTMITAYASYG 350
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 30/287 (10%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
Q DL +I Y + ++ A +F+ M RDV SWN +L+GY ++G DAA IF+R
Sbjct: 166 QFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFER 225
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFES--------KANWEVVSWNSLMGGFVKQKR 231
M +N +SW +++ Y Q+G ++A LF+ + NW V+ S++ +
Sbjct: 226 MPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW--VTIMSVLPACAQLST 283
Query: 232 LGDAKWIFD---RMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEA--PVKDVFTWTAMV 285
L + I + RM + S +T YA+ L +A+ F++ K++ W M+
Sbjct: 284 LERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMI 343
Query: 286 SGYVQNG----KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
+ Y G V R + A + + +++ +++G + +D+ + F M+
Sbjct: 344 TAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMS--TTY 401
Query: 342 SWNTMITGYA-------QSGEITHARNLFDRMPQHDCIS-WAAIIAG 380
S N + YA ++G + A L MP S W +++A
Sbjct: 402 SINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 448
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 134/318 (42%), Gaps = 69/318 (21%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN + + ++GC D+AL +F MP R+ VS+ MISGY +G A +FD+M
Sbjct: 199 DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMV 258
Query: 120 QRD--------------------------------------------LVSWNVMISGYVR 135
+ D L++ M Y +
Sbjct: 259 KEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM---YAK 315
Query: 136 NKSLSAARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWN 189
SL ARN F+ + + +++++WNTM++ YA G+ A F M ++ ++I++
Sbjct: 316 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 375
Query: 190 GLLAAYVQNGRIEEACMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
GLL+ +G ++ F + N V + + + RL +A + MP+
Sbjct: 376 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 435
Query: 245 RDEVS-WNTMITGYAQNNYL----AEAQRLFEEAPVKDVFTWTAMVSGYVQNGK---VDE 296
S W +++ ++ L A++LF P ++ + + + Y + G+ VD+
Sbjct: 436 PAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEP-ENTGNYVLLSNMYAEAGRWQEVDK 494
Query: 297 ARMIFDAMPEKNT--VSW 312
R I + K + SW
Sbjct: 495 LRAIVKSQGTKKSPGCSW 512
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 27/211 (12%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ V L L+LG Q+H ++ G + VG+ ++ Y G ++ + F I
Sbjct: 73 YAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIG 132
Query: 469 D--------KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
D K + ++ G HG + +G++ D ++
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGL----------ILRIGLQFDLYVATSLIILYGKC 182
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
G + + F +M I + + ++ ++G +D A + + MP+ + +W
Sbjct: 183 GEINDAGKVFDNMT-----IRDVSSWNALLAGYTKSGCIDAALAIFERMPWR-NIVSWTT 236
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
++ Y ++ LA++A + EM E++G+
Sbjct: 237 MISG---YSQSGLAQQALSLFDEMVKEDSGV 264
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 269/765 (35%), Positives = 420/765 (54%), Gaps = 64/765 (8%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ-RDLVSWNVMIS 131
R GC L V + + R + V+ NA+I+ Y G LD A +VF+ M RD+ SWN MIS
Sbjct: 181 RCGCEVHGLAVKHGLDRSTFVA-NALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMIS 239
Query: 132 GYVRNKSLSAARNLFEMMPKRDVVSWNT-------------------------------- 159
G ++N A +LF M +R V+S N+
Sbjct: 240 GCLQNGMFLQALDLFRGM-QRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSE 298
Query: 160 -------MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-- 210
+L Y + G D+A R+F + EK+ ISWN +L+ YVQNG EA
Sbjct: 299 VNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEML 358
Query: 211 KANWE-----VVSWNSLMG--GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ ++ +VS +S +G G++ + A I R+ +V NT++ Y + Y+
Sbjct: 359 RGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVG-NTLMDMYMKCRYI 417
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV--- 320
+ +F+ +KD +WT +++ Y Q+ + EA IF +K + + M+ G +
Sbjct: 418 EYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFRE-AQKEGIKVDPMMIGSILEA 476
Query: 321 --QTKRMDMARELFEAMTCKN----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+ + +A++L +N + N +I Y + GE+ H+ +F+ + Q D ++W
Sbjct: 477 CSGLETILLAKQL-HCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTW 535
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
++I YA SG ++L LF EM+ + + S+L L+SL GK++HG L++
Sbjct: 536 TSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR 595
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
F + ++L+ MY CGS+ A F + KD++ W MI HG GK A+ L
Sbjct: 596 RNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDL 655
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F+ M G+ PD ++ + +L ACSH+ LV +G Y M Y + P +HY C+VDLLG
Sbjct: 656 FKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLG 715
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
R+G+ +EA +K+MP +P + W +LLGACR++ ELA AA + E+EP+N G YVL
Sbjct: 716 RSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVL 775
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
+SN++A G+W + +VR ++ +RG++K SW+E+ N VHTF+ D H + +RI
Sbjct: 776 VSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLK 835
Query: 675 LEELEFKL-KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L E+ +L K+ G+ T+ VLHDV EEEK +L HSE+LA+++G+++ G P+R+ K
Sbjct: 836 LAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAK 895
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLRVC DCH K +SK+ R I++RD NRFHHFSGGSCSCGD+W
Sbjct: 896 NLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 133/575 (23%), Positives = 243/575 (42%), Gaps = 127/575 (22%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--------------- 150
G++ AR +FD M R + SWN +I Y+ + S A ++ M
Sbjct: 109 GRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLA 168
Query: 151 ---------------------------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
R N +++ YA+ G D+A R+F+ M +
Sbjct: 169 SVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDG 228
Query: 184 NEI-SWNGLLAAYVQNGRIEEACMLFES-------------------------------- 210
++ SWN +++ +QNG +A LF
Sbjct: 229 RDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGREL 288
Query: 211 -----KANWEV-VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
K+ EV + N+L+ + K R+ A +F + +D +SWN+M++ Y QN A
Sbjct: 289 HAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYA 348
Query: 265 EAQRLFEE-------APVKDVFTWTAMVS--GYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
EA E + + ++ V G++ NGK A I + + +T N +
Sbjct: 349 EAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRL-DSDTQVGNTL 407
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
+ Y++ + ++ + +F+ M K+ SW T+IT YAQS +R++
Sbjct: 408 MDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQS-----SRHI------------- 449
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++L +F E ++ G +++ S+L C+ L ++ L KQLH ++
Sbjct: 450 -------------EALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRN 496
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G V N ++ +Y +CG V + FE + KD+++W +MI YA G +AL+LF
Sbjct: 497 GL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLF 555
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLG 554
M++ ++PD + +V IL A + KG E + + + R++ + + +VD+
Sbjct: 556 AEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHM--EEAIVSSLVDMYS 613
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
G L A + + + D W A++ A ++G
Sbjct: 614 GCGSLSGALKVFNAVKCK-DMVLWTAMINATGMHG 647
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 145/335 (43%), Gaps = 53/335 (15%)
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
W+ D + + V+ + +A E D F T ++ Y + G+V +
Sbjct: 63 WVLDLVAAKKAVAQGVQVHAHAVATGSLEGD---------DGFLATKLLFMYGKCGRVAD 113
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC------------------- 337
AR++FD M + SWNA+I Y+ + A ++ AM
Sbjct: 114 ARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKA 173
Query: 338 -----------------------KNVASWNTMITGYAQSGEITHARNLFDRMPQ-HDCIS 373
++ N +I YA+ G + A +F+ M D S
Sbjct: 174 SGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVAS 233
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W ++I+G Q+G +L LF M+R +N VL C LA L LG++LH L+
Sbjct: 234 WNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALL 293
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K G E NALLVMY KCG V+ A F EI +KD ISWN+M++ Y ++G +A+
Sbjct: 294 KSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIE 352
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
M G +PD +V + SA H G + G E
Sbjct: 353 FISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKE 387
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/530 (22%), Positives = 233/530 (43%), Gaps = 66/530 (12%)
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP--- 119
Q N + + + G DSAL VF + + +S+N+M+S Y+ NG A + +M
Sbjct: 302 QCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGG 361
Query: 120 -QRD---LVSWNVMIS--GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
Q D +VS + + G++ N A + + + D NT++ Y + Y + +
Sbjct: 362 FQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDS-DTQVGNTLMDMYMKCRYIEYS 420
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
+FDRM K+ ISW ++ Y Q+ R EA +F +A E + + +M G + + G
Sbjct: 421 AHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFR-EAQKEGIKVDPMMIGSILEACSG 479
Query: 234 DAKWIFD--------RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+ R + D V N +I Y + + + ++FE KD+ TWT+M+
Sbjct: 480 LETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMI 539
Query: 286 SGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV- 340
+ Y +G ++EA ++F M + ++V+ +++ + +E+ + +N
Sbjct: 540 NCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFH 599
Query: 341 ---ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
A ++++ Y+ G ++ A +F+ + D + W A+I G+ + ++ LF M
Sbjct: 600 MEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRM 659
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+ G + F ++L C+ H +LV E C++ + ++ Y +
Sbjct: 660 LQTGVTPDHVSFLALLYACS-----------HSKLVN---EGKCYL-DMMMSTY----RL 700
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E + +VD R G ++A +E +K++ +KP + +L AC
Sbjct: 701 EPWQEHYACVVDL-----------LGRSGQTEEA---YEFIKSMPLKPKSVVWCSLLGAC 746
Query: 518 SHTGLVEKGTEY-FYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNL 565
V K E + NR + P N +Y + ++ G+ + A+ +
Sbjct: 747 R----VHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEV 792
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 406 RSP----FTSVLSTCANLASLELGKQLHGQLVKVGFEAG--CFVGNALLVMYCKCGSVEE 459
RSP + VL A ++ G Q+H V G G F+ LL MY KCG V +
Sbjct: 54 RSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVAD 113
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK---TVGIKPDDITMVGILSA 516
A F+ + + V SWN +I Y G +AL ++ +M+ G+ PD T+ +L A
Sbjct: 114 ARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKA 173
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
G G E + + +G+ ++ ++ + + G LD A + + M D A
Sbjct: 174 SGVEGDGRCGCE-VHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVA 232
Query: 577 TWGALLGAC 585
+W +++ C
Sbjct: 233 SWNSMISGC 241
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 153/353 (43%), Gaps = 35/353 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D + N + +M+ + + HVF+ M + +S+ +I+ Y + + A ++F +
Sbjct: 398 DSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFRE 457
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR------------DVVSWNTMLSGYA 165
Q++ + + M+ G + L A L ++ + D+V N ++ Y
Sbjct: 458 -AQKEGIKVDPMMIGSI----LEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYG 512
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNS 221
+ G + ++F+ + +K+ ++W ++ Y +G + EA +LF + +V V+ S
Sbjct: 513 ECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVS 572
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
++G L K + + R +E ++++ Y+ L+ A ++F KD
Sbjct: 573 ILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKD 632
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFE 333
+ WTAM++ +G +A +F M + VS+ A++ +K ++ + +
Sbjct: 633 MVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLD 692
Query: 334 -AMTCKNVASWN----TMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
M+ + W ++ +SG+ A MP + + W +++
Sbjct: 693 MMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGA 745
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/736 (35%), Positives = 412/736 (55%), Gaps = 30/736 (4%)
Query: 72 MRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVS 125
M GC D A +FN M R ++S+N++IS N + + + F M + + +
Sbjct: 204 MFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTT 263
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRML 181
++++S L + + + K ++ NT+LS Y+ G + A IF RM
Sbjct: 264 LSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP 323
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFVKQKRLGDAKW 237
E++ ISWN +LA YVQ+GR A +F K V++ S + + + + K
Sbjct: 324 ERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKI 383
Query: 238 IFDRMPV---RDE-VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
+ + V +DE + NT+IT Y + + +AEA+++F+ P D TW A++ G+ N +
Sbjct: 384 LHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAE 443
Query: 294 VDEARMIFDAMPEKNTVSWNAM----IAGYVQTKRMDMARELFEAMTCKNVASWN----- 344
++EA F M E +T + + I G T D+ + V ++
Sbjct: 444 LNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHE-DLIKYGIPIHAHTVVTGFDLDQHV 502
Query: 345 --TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
++IT YA+ G++ + +FD++ W AIIA A+ G+ E++L+L + M+ G
Sbjct: 503 QSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGI 562
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
++ F++ LS A+LA LE G+QLHG +K+GFE F+ NA + MY KCG +++A
Sbjct: 563 EFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALR 622
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
+ D+ +SWNT+I+ ARHG A F M +G+KP+ ++ V +LSACSH GL
Sbjct: 623 ILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGL 682
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V++G Y+ SM YG+ P +H CM+DLLGR+GRL EA+ + MP P+ W +LL
Sbjct: 683 VDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLL 742
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
+CR+Y +L KAA+ + E++P + YVL SN++A GRW DV VR +M ++K
Sbjct: 743 ASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQK 802
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
+SW++ + + F +GD HP+ ++I L L + + G+V T L D EE+
Sbjct: 803 KPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQ 862
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KEH + HSE++A+A+G+++IP G +R+ KNLRVC DCH+ K +S ++GR I+LRD
Sbjct: 863 KEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPY 922
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF+ G+CSC DYW
Sbjct: 923 RFHHFTNGNCSCSDYW 938
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 162/673 (24%), Positives = 274/673 (40%), Gaps = 165/673 (24%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRN-------------------------KSLS 140
G+++ A+ VFD+M +R+ SWN M+SGYVR SL
Sbjct: 6 GRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLV 65
Query: 141 AARNLFEMMPKR---------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
A N +M K DV + + YA G A+++F+ M ++N
Sbjct: 66 TACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNV 125
Query: 186 ISWNGLLAAYVQNG------------RIEEACM------LFESKANW------------- 214
+SW L+ +Y NG R E C L S +
Sbjct: 126 VSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGH 185
Query: 215 --------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+V + NSL+ F + +A IF+ M RD +SWN++I+ AQN E+
Sbjct: 186 ALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEES 245
Query: 267 QRLF-------EEAPVK------------DVFTW--------------------TAMVSG 287
R F EE D W ++S
Sbjct: 246 FRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSV 305
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------ 335
Y G+ +A +IF MPE++ +SWN+M+A YVQ R A ++F M
Sbjct: 306 YSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTF 365
Query: 336 -----TCKNVASW----------------------NTMITGYAQSGEITHARNLFDRMPQ 368
C + + NT+IT Y + ++ A+ +F RMP+
Sbjct: 366 TSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPK 425
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER--LNRSPFTSVLSTCANLASL-ELG 425
D ++W A+I G+A + +++ F ++ R G ++ ++L +C L + G
Sbjct: 426 LDKVTWNALIGGFANNAELNEAVAAF-KLMREGSTSGVDYITIVNILGSCLTHEDLIKYG 484
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+H V GF+ V ++L+ MY KCG + + + F+++V K WN +IA AR+
Sbjct: 485 IPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARY 544
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
GFG++AL L M++ GI+ D LS + ++E+G + + G +
Sbjct: 545 GFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQ-LHGSTIKLGFELDHFI 603
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM- 604
+D+ G+ G LD+A ++ P + +W L+ +G+ A++ + ++
Sbjct: 604 INAAMDMYGKCGELDDALRILPQ-PTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLG 662
Query: 605 -EPENAGMYVLLS 616
+P + LLS
Sbjct: 663 VKPNHVSFVCLLS 675
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 214/506 (42%), Gaps = 96/506 (18%)
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------------- 272
+ K R+ A+ +FDRM R+E SWN M++GY + EA F +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 273 ---------------------------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ DVF T+ V Y G V A+ +F+ MP
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKN---------------------- 339
++N VSW +++ Y ++ M C N
Sbjct: 122 DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQ 181
Query: 340 -------------VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
V++ N++I + G+I A ++F+ M + D ISW +II+ AQ+
Sbjct: 182 LLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTL 241
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E+S R F M+ E +N + + +LS C ++ L+ GK +HG VK G E+ + N
Sbjct: 242 HEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNT 301
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
LL +Y G ++A F + ++D+ISWN+M+A Y + G AL +F M + + +
Sbjct: 302 LLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEIN 361
Query: 507 DITMVGILSACSH-----TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
+T L+AC G + G + +D +I N+ ++ G+ ++ E
Sbjct: 362 YVTFTSALAACLDPEFFTNGKILHGFVVVLGL-QDELIIGNT-----LITFYGKCHKMAE 415
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYA 620
A+ + + MP + D TW AL+G EL E A E +G+ Y+ + N+
Sbjct: 416 AKKVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNILG 472
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGY 646
+ D+ K + + V VTG+
Sbjct: 473 SCLTHEDLIKYGIPIHAHTV--VTGF 496
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 240/568 (42%), Gaps = 108/568 (19%)
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG-YADAARRIFDRMLEKNEISWNGL 191
Y + ++ A+ +F+ M +R+ SWN M+SGY + G Y +A +F R + I +G
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAV--LFFRDICGIGIKPSGF 59
Query: 192 LAAYVQNGRIEEACML--------FESKAN--WEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ A + + + M F K ++V S + + + +A+ +F+
Sbjct: 60 MIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119
Query: 242 MPVRDEVSWNTMITGYAQN----------------------------------------- 260
MP R+ VSW +++ Y+ N
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILG 179
Query: 261 -NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
L A + E V + M G G ++EA IF+ M E++T+SWN++I+
Sbjct: 180 HQLLGHALKFGLETKVSAANSLIFMFGGC---GDINEACSIFNEMNERDTISWNSIISAN 236
Query: 320 VQTKRMDMARELFEAM-----------------TC----------------------KNV 340
Q + + F M C N+
Sbjct: 237 AQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNI 296
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
NT+++ Y+ +G A +F RMP+ D ISW +++A Y Q G +L++F EM
Sbjct: 297 CLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWM 356
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
+ +N FTS L+ C + GK LHG +V +G + +GN L+ Y KC + EA
Sbjct: 357 KKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEA 416
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK---TVGIKPDDITMVGILSAC 517
F+ + D ++WN +I G+A + +A+ F+ M+ T G+ D IT+V IL +C
Sbjct: 417 KKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSC 474
Query: 518 -SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+H L++ G ++ G + + ++ + + G L + + + F+ ++
Sbjct: 475 LTHEDLIKYGIP-IHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKT-SS 532
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEM 604
W A++ A YG E+A +++ M
Sbjct: 533 VWNAIIAANARYG---FGEEALKLVVRM 557
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 164/376 (43%), Gaps = 46/376 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP-RRSSVSYNAMISG--------YLLNGQLDP 110
D+ WN + ++++G C AL VF M + ++Y S + NG++
Sbjct: 326 DLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILH 385
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
V + Q +L+ N +I+ Y + ++ A+ +F+ MPK D V+WN ++ G+A N
Sbjct: 386 GFVVVLGL-QDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAEL 444
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW-------EVVS----- 218
+ A F M E S +G+ Y+ I +C+ E + VV+
Sbjct: 445 NEAVAAFKLMREG---STSGV--DYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLD 499
Query: 219 ---WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL---FEE 272
+SL+ + K L + +IFD++ + WN +I A+ + EA +L
Sbjct: 500 QHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRS 559
Query: 273 APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDM 327
A ++ D F ++ +S ++E + + + E + NA + Y + +D
Sbjct: 560 AGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDD 619
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM------PQHDCISWAAIIAGY 381
A + T ++ SWNT+I+ A+ G+ A+ F M P H +S+ +++
Sbjct: 620 ALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNH--VSFVCLLSAC 677
Query: 382 AQSGYSEDSLRLFIEM 397
+ G ++ L + M
Sbjct: 678 SHGGLVDEGLAYYASM 693
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY K G + A F+ + +++ SWN M++GY R G +A++ F + +GIKP
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ +++AC+ + ++ K F+ G+I + T V G + AQ + M
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 570 PFEPDAATWGALL 582
P + + +W +L+
Sbjct: 121 P-DRNVVSWTSLM 132
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/617 (40%), Positives = 377/617 (61%), Gaps = 25/617 (4%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I Y G LD AR+VFD+M +R++ S+N +IS +R + + LF +MP++D
Sbjct: 63 NRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQC 122
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEAC----ML 207
SWN+M++G+AQ+ + A F RM N+ S+ L+A + ++ ++
Sbjct: 123 SWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLI 182
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+SK + +V + L+ + K +G A+ +FD M ++ VSWN +IT Y QN EA
Sbjct: 183 SKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEAL 242
Query: 268 RLF----------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
F +E + V + A ++ + + ++ AR++ + + NA++
Sbjct: 243 EAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQI-HARVVKSDKFRNDLILGNALVD 301
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + R++ AR +F+ M +N S TM++GYA+S + AR++F + Q D +SW A+
Sbjct: 302 MYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNAL 361
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IAGY Q+G +E++L LF +KR F ++L+ ANLA LELG+Q H +VK GF
Sbjct: 362 IAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGF 421
Query: 438 ------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
E FVGN+L+ MY KCGSVEE FE +V+KD +SWNTMI GYA++G+G +A
Sbjct: 422 RFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEA 481
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L LF+ M G KPD +TM+G L ACSH GLVE+G YF+SM +++G++P HYTCMVD
Sbjct: 482 LELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVD 541
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG L+EA++L+++MP +PDA W +LL AC+++ L + AE IFE++P ++G
Sbjct: 542 LLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGP 601
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVLL+N+Y+ GRWGD VR MR RGV K G SW+++Q+ VH F V D HP+K I
Sbjct: 602 YVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEI 661
Query: 672 YAYLEELEFKLKQDGFV 688
Y+ L+ L ++Q G+V
Sbjct: 662 YSILKLLTKHMRQAGYV 678
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 229/496 (46%), Gaps = 76/496 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ +N I+T MR G D + +F+ MP + S+N+MI+G+ + + + A F +M
Sbjct: 89 NVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMH 148
Query: 120 QRDLV----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYAD 171
+ D V S+ +S R K L + ++ K DV + ++ Y++ G
Sbjct: 149 RDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVG 208
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----------------------- 208
ARR+FD M EKN +SWN L+ Y QNG EA F
Sbjct: 209 CARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACA 268
Query: 209 -----------------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
K +++ N+L+ + K R+ +A+ +FDRMPVR+ VS
Sbjct: 269 TLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSET 328
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV- 310
TM++GYA++ + A+ +F KD+ +W A+++GY QNG+ +EA +F + ++
Sbjct: 329 TMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCP 388
Query: 311 ---SWNAMIAGYVQTKRMDMAREL----------FEAMTCKNVASWNTMITGYAQSGEIT 357
++ ++ +++ R+ F++ ++ N++I Y + G +
Sbjct: 389 THYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVE 448
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+F+ M + D +SW +I GYAQ+GY ++L LF +M GE+ + L C+
Sbjct: 449 EGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS 508
Query: 418 NLASLELGKQL-------HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+ +E G++ HG L+ V C V + + G +EEA E + +
Sbjct: 509 HAGLVEEGRRYFFSMTKEHG-LLPVKDHYTCMVD-----LLGRAGCLEEAKDLIESMPKQ 562
Query: 471 -DVISWNTMIAGYARH 485
D + W+++++ H
Sbjct: 563 PDAVVWSSLLSACKVH 578
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 151/303 (49%), Gaps = 31/303 (10%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
RL + ++VF ++ Y + G +D AR +FD M E+N S+N++I+ ++ +D
Sbjct: 49 RLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDE 108
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ LF M K+ SWN+MI G+AQ DR
Sbjct: 109 SAWLFSLMPEKDQCSWNSMIAGFAQH----------DRF--------------------- 137
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
E++L F+ M R LN F S LS C+ L L+LG Q+HG + K + F+G+ L
Sbjct: 138 EEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGL 197
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ Y KCG V A F+ + +K+V+SWN +I Y ++G +AL F M +G KPD+
Sbjct: 198 IDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDE 257
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T+ ++SAC+ ++G + + + + +VD+ + GR++EA+ +
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317
Query: 568 NMP 570
MP
Sbjct: 318 RMP 320
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 13/266 (4%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ SPF +L C L S + +HG+L++ F F+ N L+ +Y KCG ++ A F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + +++V S+N++I+ R GF ++ LF M + D + +++ + E
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMP----EKDQCSWNSMIAGFAQHDRFE 138
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD---EAQNLMKNMPFEPDAATWGAL 581
+ ++F M+RD V+ N + + R L + L+ + D L
Sbjct: 139 EALDWFVRMHRDDFVL-NDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGL 197
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
+ Y K L A V ME +N + L Y +G + + +M + G K
Sbjct: 198 ID---FYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFK 254
Query: 642 --KVTGYSWLEVQNKVHTFSVGDTLH 665
+VT S + + F G +H
Sbjct: 255 PDEVTLASVVSACATLAAFKEGVQIH 280
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/792 (33%), Positives = 418/792 (52%), Gaps = 86/792 (10%)
Query: 60 DIRQWNVAITTHMRNGC--CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
++ W I+ + ++G A +VF+ M R+ S++ M+SGY+ G + A +F Q
Sbjct: 305 NVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 364
Query: 118 M------PQRDLVSWNVMI---SGYVRNKSLSA--------------------------- 141
M P +V+ + SGY+ ++
Sbjct: 365 MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 424
Query: 142 ----ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
A+ LFE MP +VVSW +++ GY+ +G ++ RM ++ +S N A V
Sbjct: 425 LVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG-VSGNQNTFATVT 483
Query: 198 N--GRIEEACMLFESKANW-------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
+ G +E+ + ++ + V NSL+ F + +A ++FD M D +
Sbjct: 484 SSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDII 543
Query: 249 SWNTMITGYAQNNYLAEAQRLFE-------------------EAPVKDVFTWTAMVSGYV 289
SWN MI+ YA + E+ R F D W + G V
Sbjct: 544 SWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLV 603
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+D N N ++ Y + R + A +F+AMT +++ SWN+M+
Sbjct: 604 VKLGLD-----------SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 652
Query: 350 YAQSGEITHARNLFD---RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
Y Q G+ + +M + D ++W A+I G+A++ ++++ + ++ G N
Sbjct: 653 YVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 712
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S+ +T ANLA LE G+QLHG ++K+GFE+ V NA + MY KCG + + +
Sbjct: 713 ITMVSLAAT-ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ 771
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+++ +SWN +I+ +ARHG + A F M +G KPD +T V +LSAC+H GLV++G
Sbjct: 772 PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEG 831
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
Y+ SM R++GV P +H C++DLLGR+GRL A+ +K MP P+ W +LL ACR
Sbjct: 832 LAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACR 891
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++G ELA K AE + E++P + YVL SN+ A SG+W DV +R +M +KK
Sbjct: 892 IHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPAC 951
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHM 706
SW+++++KVH+F +G+ HP+ RI A L EL K+ G+V T LHD+ EE+KE+
Sbjct: 952 SWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYN 1011
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
L HSE+LA+A+G+++ P +R+ KNLRVC DCH+ K +S IVGR I+LRD RFHH
Sbjct: 1012 LWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHH 1071
Query: 767 FSGGSCSCGDYW 778
FSGG CSCGDYW
Sbjct: 1072 FSGGKCSCGDYW 1083
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 174/655 (26%), Positives = 310/655 (47%), Gaps = 80/655 (12%)
Query: 7 LRQLHSSCILHQHTQSINRLQS-PANTNPYPSKKTLKRHLNSKSRNKP--------KPAG 57
++ S+C L + +++ L S P +P K L+ ++ K++ +
Sbjct: 2 FSKIQSACNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGF 61
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D+ I +++ G +A +VF+ MP RS VS+ AM+SGY NG+ + A +F
Sbjct: 62 GSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSD 121
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M + + + ++ + + + A LF M +RDVVSWN M+ GYA G+AD + +F
Sbjct: 122 MRHCGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMF 181
Query: 178 DRMLEKNEI----SWNGLLAAYVQNGRIEEACMLFE-----SKANWEVVSWNSLMGGFVK 228
ML + + +L A + G + A + ++++V+ L+ + K
Sbjct: 182 RSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT-GLLINAYAK 240
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYA----------------QNNYLAEAQRLFEE 272
L AK + M +D S +ITGYA ++ + +A+R F+E
Sbjct: 241 NGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDE 300
Query: 273 APVKDVFTWTAMVSGYVQNG--KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
K+V +WT+++SGY ++G + AR +FD M +N SW+ M++GYV+ + A
Sbjct: 301 MEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVG 360
Query: 331 LFEAM-----------------TCK-----------------------NVASWNTMITGY 350
LF M C +V ++ Y
Sbjct: 361 LFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFY 420
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
G + +A+ LF+ MP H+ +SW +++ GY+ SG + L ++ M++ G N++ F
Sbjct: 421 GSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFA 480
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+V S+C L LG Q+ G +++ GFE V N+L+ M+ SVEEA + F+ + +
Sbjct: 481 TVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC 540
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D+ISWN MI+ YA HG +++L F M+ + + + T+ +LS CS ++ G
Sbjct: 541 DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRG-I 599
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
+ + G+ N ++ L AGR ++A+ + + M E D +W +++ AC
Sbjct: 600 HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMM-AC 652
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 187/417 (44%), Gaps = 61/417 (14%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D+ T ++ YV+ G V AR +FD MPE++ VSW AM++GY Q R + A LF M
Sbjct: 64 DLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMR 123
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
V + + ++ +++ G++ A LF M + D +SW A+I GYA G+++DS +F
Sbjct: 124 HCGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRS 183
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF------------------- 437
M R G + SVL A L + Q+HG + ++G+
Sbjct: 184 MLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGS 243
Query: 438 ----------------------------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
E +GNAL+ MY K G +E+A AF+E+ +
Sbjct: 244 LRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEE 303
Query: 470 KDVISWNTMIAGYARHGFGK--DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
K+VISW ++I+GYA+HG+G A +F+ M+ ++ + +LS GL E+
Sbjct: 304 KNVISWTSLISGYAKHGYGHMAHARYVFDEMR----HRNEASWSTMLSGYVRVGLYEEAV 359
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL-DEA---QNLMKNMPFEPDAATWGALLG 583
F M GV PN ++ R+G + DE + D AL+
Sbjct: 360 GLFCQM-WGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALV- 417
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
YG L A ++ EM N + L Y+ SG G+V V +MR GV
Sbjct: 418 --HFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 472
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/541 (41%), Positives = 342/541 (63%), Gaps = 11/541 (2%)
Query: 249 SWNTMITGYAQNNYLAEA------QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
++N ++ ++Q+N Q + AP D +T+T+++ +V E + +
Sbjct: 92 AYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHC 151
Query: 303 AMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
+ E N N+++ Y + +A++LF+ M ++V SWNT+I+GY SG +
Sbjct: 152 FVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDK 211
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSPFTSVLSTCA 417
AR +FD M + + +SW+ +I+GYA++ D++ LF +M+ G N SVLS CA
Sbjct: 212 ARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACA 271
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+L +L+LGK +H + + E G F+GNAL MY KCG V EA F E+ ++DVISW+
Sbjct: 272 HLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSI 331
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I G A +G+ +A F M G++P+DI+ +G+L+AC+H GLV+KG EYF M + Y
Sbjct: 332 IIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVY 391
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ P +HY C+VDLL RAGRLD+A++L+ +MP +P+ WGALLG CR+Y E E+
Sbjct: 392 GITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERV 451
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
I E++ ++G V L+N+YA+ GR D + RL+MRD K G SW+E+ N V+
Sbjct: 452 VWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYE 511
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F +GD+ HP+ RIY+ + EL++K+K G+ T LV+H++ EEEKE L HSEKLA+A
Sbjct: 512 FFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALA 571
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G+++ G IR++KNLRVC DCH+AIK ISKIV R I++RD +RFHHF G CSC DY
Sbjct: 572 FGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDY 631
Query: 778 W 778
W
Sbjct: 632 W 632
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 42/300 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + GC A +F+ M R VS+N +ISGY +G +D AR VFD M +++LV
Sbjct: 166 NSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLV 225
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARRIFDR 179
SW+ MISGY RN+ + A LF M + V+ ++LS A G D + I R
Sbjct: 226 SWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWI-HR 284
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
+ +N+I L N+L + K + +AK +F
Sbjct: 285 FIRRNKIEVGLFLG--------------------------NALADMYAKCGCVLEAKGVF 318
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVD 295
M RD +SW+ +I G A Y EA F E+ + ++ +++ G VD
Sbjct: 319 HEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVD 378
Query: 296 EARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG 349
+ FD MP+ ++ + ++ + R+D A L +M + NV W ++ G
Sbjct: 379 KGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 50/315 (15%)
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
E N N L+ Y + G A LF+ +VVSWN+L+ G+ + A+ +FD
Sbjct: 159 ESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDG 218
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-------APVKDVFTWTAMVSGYVQNGKV 294
M ++ VSW+TMI+GYA+N A+A LF + AP DV T +++S G +
Sbjct: 219 MMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAP-NDV-TLVSVLSACAHLGAL 276
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
D + W I +++ ++++ LF N + YA+ G
Sbjct: 277 DLGK-------------W---IHRFIRRNKIEVG--LFLG---------NALADMYAKCG 309
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ A+ +F M + D ISW+ II G A GY+ ++ F EM G N F +L+
Sbjct: 310 CVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLT 369
Query: 415 TCAN-------LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
C + L ++ Q++G K+ GC V + + G +++A +
Sbjct: 370 ACTHAGLVDKGLEYFDMMPQVYGITPKIE-HYGCVVD-----LLSRAGRLDQAESLINSM 423
Query: 468 -VDKDVISWNTMIAG 481
+ +VI W ++ G
Sbjct: 424 PMQPNVIVWGALLGG 438
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN I+ + +G D A VF+ M ++ VS++ MISGY N + A ++F QM
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQ 251
Query: 120 QR-----------------------DLVSW-----------------NVMISGYVRNKSL 139
DL W N + Y + +
Sbjct: 252 HEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCV 311
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY 195
A+ +F M +RDV+SW+ ++ G A GYA+ A F M LE N+IS+ GLL A
Sbjct: 312 LEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTAC 371
Query: 196 VQNGRIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV-S 249
G +++ F+ ++ + ++ + RL A+ + + MP++ V
Sbjct: 372 THAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIV 431
Query: 250 WNTMITG 256
W ++ G
Sbjct: 432 WGALLGG 438
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 272/822 (33%), Positives = 430/822 (52%), Gaps = 101/822 (12%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+WD+ + + + G A +F+ M R V +N M+ GY+ G A Q+F +
Sbjct: 759 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 818
Query: 118 MPQR----DLVSWNVMISG----------YVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
+ D S ++++G ++ ++ + A L DV WN LS
Sbjct: 819 FHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSE 878
Query: 164 YAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
G A F M ++ + ++ +LAA +E + +S + +
Sbjct: 879 CLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSD 938
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----- 270
V NSL+ + K A+ +F+ M D +SWN+MI+ AQ++ E+ LF
Sbjct: 939 VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 998
Query: 271 -----------------------------------EEAPVKDVFTWTAMVSGYVQNGKVD 295
+ + D F T ++ Y ++GK++
Sbjct: 999 EGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKME 1058
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF-------------------EAMT 336
EA +F + + WNAM+ GY+ A ELF +A
Sbjct: 1059 EAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACG 1118
Query: 337 CKNVASWNTMITGYA--------------------QSGEITHARNLFDRMPQHDCISWAA 376
C + I +A + G++ +A +F+ + D ++W +
Sbjct: 1119 CLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTS 1178
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I+G +G + +LR++ M++ + F +++ + + +LE G+QLH ++K+
Sbjct: 1179 MISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLD 1238
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ FVG +L+ MY KCG++E+AY F+++ +++ WN M+ G A+HG ++A+ LF+
Sbjct: 1239 CVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFK 1298
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
SMK+ GI+PD ++ +GILSACSH GL + EY +SM DYG+ P +HY+C+VD LGRA
Sbjct: 1299 SMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA 1358
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G + EA +++ MPF+ A+ ALLGACR+ G E ++ A +F +EP ++ YVLLS
Sbjct: 1359 GLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLS 1418
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+YAA+ RW DV+ R M+ + VKK G+SW++V+N +H F V D HP+ D IY +E
Sbjct: 1419 NIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVE 1478
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
E+ +++DG+V T+ VL DV +EEKE L YHSEKLA+AYG++S PA IRV+KNLR
Sbjct: 1479 EMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLR 1538
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC DCHNAIK+ISK+ R I+LRD NRFHHF G CSCGDYW
Sbjct: 1539 VCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 246/566 (43%), Gaps = 72/566 (12%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
A+ + LL G+ AR V +S N +++ Y + SLS+AR +F+ P+RD+V+
Sbjct: 631 AISTHNLLLGKCTHARIVVSGSAGDHFLS-NNLLTMYSKCGSLSSARQVFDTTPERDLVT 689
Query: 157 WNTMLSGYA-----QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM----- 206
WN +L YA +G A +F R+L + S + A V + C+
Sbjct: 690 WNAILGAYAASVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG 748
Query: 207 ----LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
+ W+V +L+ + K R+ DA+ +FD M RD V WN M+ GY Q
Sbjct: 749 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 808
Query: 263 LAEAQRLF----------EEAPVK-----------------------------------D 277
EA +LF +E V+ D
Sbjct: 809 EKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPD 868
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMAREL-- 331
VF W +S + G A F M N V+ ++A T +++ +++
Sbjct: 869 VFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHG 928
Query: 332 --FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
++ +V+ N+++ Y++ G AR +F+ M D ISW ++I+ AQS E+
Sbjct: 929 IAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEE 988
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLAS-LELGKQLHGQLVKVGFEAGCFVGNALL 448
S+ LFI++ G + + SVL C++L L + +Q+H +K G A FV L+
Sbjct: 989 SVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLI 1048
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
+Y K G +EEA F+ D D+ WN M+ GY GK AL LF + G K D I
Sbjct: 1049 DVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQI 1108
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T+ AC L+++G + ++ G + + ++D+ + G + A ++ N
Sbjct: 1109 TLATAAKACGCLVLLDQGKQ-IHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA-GIVFN 1166
Query: 569 MPFEPDAATWGALLGACRLYGKTELA 594
PD W +++ C G + A
Sbjct: 1167 YISAPDDVAWTSMISGCVDNGNEDQA 1192
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 24/230 (10%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L T + +L LGK H ++V G F+ N LL MY KCGS+ A F+ ++D
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 472 VISWNTMIAGYA-----RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV--- 523
+++WN ++ YA G ++ L LF ++ +T+ +L C ++G +
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E Y + ++ V + +V++ + GR+ +A+ L M E D W +L
Sbjct: 747 EGVHGYAIKIGLEWDVFVSG----ALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMML- 800
Query: 584 ACRLYGKTELAEKAAEVIFE-----MEPENAGMYVLLSNLYAAS---GRW 625
+ Y + L ++A ++ E + P+ + ++L+ + + G+W
Sbjct: 801 --KGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 25/310 (8%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + +++ G +A VFN + V++ +MISG + NG D A +
Sbjct: 1135 KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALR 1194
Query: 114 VFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYA 165
++ +M Q D ++ +I +L R L + K D VS +++ YA
Sbjct: 1195 IYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYA 1254
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNS 221
+ G + A R+F +M +N WN +L Q+G EEA LF+S + + VS+
Sbjct: 1255 KCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIG 1314
Query: 222 LMGGFVKQKRLGDAKWIFDRMP----VRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVK 276
++ +A MP + E+ ++ ++ + + EA ++ E P K
Sbjct: 1315 ILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 1374
Query: 277 D------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ G V+ GK AR+ A+ ++ ++ + Y R D +
Sbjct: 1375 ASASINRALLGACRIQGDVETGKRVAARLF--ALEPFDSAAYVLLSNIYAAANRWDDVTD 1432
Query: 331 LFEAMTCKNV 340
+ M KNV
Sbjct: 1433 ARKMMKRKNV 1442
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/541 (41%), Positives = 334/541 (61%), Gaps = 39/541 (7%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF---- 332
DV +++ Y + G V+ AR +FD M E++ VSWN MI Y + + A ++F
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 333 ----------------------EAMTCK-------------NVASWNTMITGYAQSGEIT 357
+A+ CK N+ ++ YA+ G I
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F+ M ++W++++AGY Q+ E++L L+ +R N+ +SV+ C+
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
NLA+L GKQ+H + K GF + FV ++ + MY KCGS+ E+Y F E+ +K++ WNT
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I+G+A+H K+ ++LFE M+ G+ P+++T +LS C HTGLVE+G +F M Y
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ PN HY+CMVD+LGRAG L EA L+K++PF+P A+ WG+LL +CR+Y ELAE A
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 454
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE +FE+EPENAG +VLLSN+YAA+ +W +++K R +RD VKKV G SW+++++KVHT
Sbjct: 455 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 514
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
FSVG++ HP I + L+ L K ++ G+ S + LHDV +KE +L HSEKLA+
Sbjct: 515 FSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 574
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G++ +P P+R+MKNLR+C DCH +K S R II+RD NRFHHFS G CSCGD+
Sbjct: 575 FGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Query: 778 W 778
W
Sbjct: 635 W 635
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 194/423 (45%), Gaps = 34/423 (8%)
Query: 87 MPRRS---SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
+PRRS S+S N + ++ P R ++ R+LV + + RN ++ A+
Sbjct: 25 LPRRSNTSSLSRNISVLASYDQEEVSPGRYS-NEFSNRNLVHEILQLCA--RNGAVMEAK 81
Query: 144 ----NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
+ + + DV N +++ Y++ G+ + AR++FD MLE++ +SWN ++ Y +N
Sbjct: 82 ACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNR 141
Query: 200 RIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN--- 251
EA +F N E + L V L K + V+ + N
Sbjct: 142 MESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK--LHCLSVKTCIDLNLYV 199
Query: 252 --TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP---- 305
++ YA+ + +A ++FE K TW++MV+GYVQN +EA +++
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHAR 360
E+N + +++I + +++ A+ CK NV ++ + YA+ G + +
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+F + + + W II+G+A+ ++ + LF +M++ G N F+S+LS C +
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 421 SLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTM 478
+E G++ + G + ++ + + G + EAY + I D W ++
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 479 IAG 481
+A
Sbjct: 439 LAS 441
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 399 RYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
RY NR+ +L CA ++ K HG+++++ E + N L+ Y KCG V
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E A F+ ++++ ++SWNTMI Y R+ +AL +F M+ G K + T+ +LSAC
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 518 S-HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+ +E + + ++ + N T ++DL + G + +A + ++M + +
Sbjct: 173 GVNCDALE--CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSV 229
Query: 577 TWGALLGA 584
TW +++
Sbjct: 230 TWSSMVAG 237
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 129/298 (43%), Gaps = 45/298 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D ++ + + + G A+ VF SM +SSV++++M++GY+ N + A
Sbjct: 190 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 249
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPK----RDVVSWNTMLSGYA 165
++ + + L +S + S AA + + ++ K +V ++ + YA
Sbjct: 250 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 309
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ G + IF + EKN WN +++ + ++ R +E +LFE
Sbjct: 310 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE---------------- 353
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFT 280
K ++ G +EV+++++++ + E +R F+ +V
Sbjct: 354 --KMQQDGMHP---------NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 402
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDM----ARELFE 333
++ MV + G + EA + ++P T S W +++A K +++ A +LFE
Sbjct: 403 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE 460
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/794 (33%), Positives = 412/794 (51%), Gaps = 96/794 (12%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------DLVSWNVMISG 132
++L + S+P S + + G + G R V + +R DL NV+++
Sbjct: 46 TSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNM 105
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISW 188
Y + L++AR LF+ MP+R++VS+ T++ +AQ G +AA +F R+ E N+
Sbjct: 106 YGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVL 165
Query: 189 NGLLAAYVQ------NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+L + G + N V S L+ + + DA+ +F+ +
Sbjct: 166 TTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGS--GLIDAYSLCSLVSDAEHVFNGI 223
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWT---------------- 282
+D V W M++ Y++N+ A R+F + V + F T
Sbjct: 224 VRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGK 283
Query: 283 -------------------AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
A++ Y + G + +AR+ F+ +P + + + MI+ Y Q+
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 343
Query: 324 RMDMARELFEAM-----------------TCKNVASW----------------------N 344
+ + A ELF + C N+ N
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++ YA+ ++ + +F + + +SW I+ G++QSG E++L +F EM+
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ ++SVL CA+ AS+ Q+H + K F +GN+L+ Y KCG + +A F
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ ++++D+ISWN +I+GYA HG DAL LF+ M ++ +DIT V +LS CS TGLV
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G F SM D+G+ P+ +HYTC+V LLGRAGRL++A + ++P P A W ALL +
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C ++ L +AE I E+EP++ YVLLSN+YAA+G V+ +R MR+ GV+KV
Sbjct: 644 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 703
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW+E++ ++H FSVG HP+ I A LE L K ++G++ +VLHDV +E+K
Sbjct: 704 GLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKT 763
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
ML HSE+LA+AYG++ P G PIR++KNLR C DCH A ISKIV R II+RD NRF
Sbjct: 764 RMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRF 823
Query: 765 HHFSGGSCSCGDYW 778
HHF G CSCGDYW
Sbjct: 824 HHFEDGKCSCGDYW 837
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 125/587 (21%), Positives = 226/587 (38%), Gaps = 131/587 (22%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF- 115
G D+ NV + + + G SA +F+ MP R+ VS+ ++ + G + A +F
Sbjct: 92 GRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFR 151
Query: 116 ---------DQMPQRDLV------------------SWNV-----------MISGYVRNK 137
+Q ++ +W + +I Y
Sbjct: 152 RLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCS 211
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA 193
+S A ++F + ++D V W M+S Y++N + A R+F +M + N + +L
Sbjct: 212 LVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLK 271
Query: 194 AY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
A V G+ C + ++ + E +L+ + K + DA+ F+ +P D +
Sbjct: 272 AAVCLPSVVLGKGIHGCAI-KTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVI 330
Query: 249 SWNTMITGYAQNNYLAEAQRLF----------------------------------EEAP 274
+ MI+ YAQ+N +A LF
Sbjct: 331 LLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHA 390
Query: 275 VK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+K D+F A++ Y + +D + IF ++ + N VSWN ++ G+ Q+ + A
Sbjct: 391 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450
Query: 330 ELFEAM-----------------TCKNVASW----------------------NTMITGY 350
+F M C + AS N++I Y
Sbjct: 451 SVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTY 510
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A+ G I A +F + + D ISW AII+GYA G + D+L LF M + N F
Sbjct: 511 AKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFV 570
Query: 411 SVLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
++LS C++ + G L + + G + ++ + + G + +A +I
Sbjct: 571 ALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPS 630
Query: 470 -KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ W +++ H AL F + K + I+P D T +LS
Sbjct: 631 APSAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLS 675
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/745 (34%), Positives = 403/745 (54%), Gaps = 91/745 (12%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+++V +I+ YV + +S +R+ F+ + K+++ SWN+++S Y + G A +++
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 181 --------LEKNEISWNGLLAAYVQ--NGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
L + ++ +L A V +G+ + C +F+ +V SL+ + +
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLVDGK-KVHCCVFKMGFEDDVFVAASLVHLYSRYG 170
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEA------------P 274
L A +F MPV+D SWN MI+G+ QN A A R+ E P
Sbjct: 171 VLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILP 230
Query: 275 V-----------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
V DVF A+++ Y + G++ +A+M+FD M ++ VS
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS 290
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTC---------------------------------- 337
WN++IA Y Q A F+ M
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350
Query: 338 ------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
K+V N ++ YA+ G + A +FD++P+ D ISW ++ GY Q+G + +++
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410
Query: 392 RLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
+ M+ + + N+ + S++ +++ +L+ G ++H +L+K FV L+ +
Sbjct: 411 DAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDL 470
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG +E+A F EI + WN +IA HG G++AL LF+ M +K D IT
Sbjct: 471 YGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITF 530
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
V +LSACSH+GLV++G + F M ++YG+ P+ KHY CMVDLLGRAG L++A L++NMP
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
+PDA+ WGALL AC++YG EL A++ + E++ EN G YVLLSN+YA + +W V K
Sbjct: 591 IQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
VR RDRG++K G+S + V +K F G+ HP+ IY L+ L K+K G+V
Sbjct: 651 VRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPD 710
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
V D+ E+EKE +L HSE+LA+A+GI+S P PIR+ KNLRVC DCHNA K+IS+
Sbjct: 711 YSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISR 770
Query: 751 IVGRLIILRDNNRFHHFSGGSCSCG 775
I R I++RD+NRFHHF G CSC
Sbjct: 771 ISEREIVVRDSNRFHHFKDGICSCA 795
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 194/463 (41%), Gaps = 100/463 (21%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP------------- 119
R G D A VF MP + S+NAMISG+ NG A V ++M
Sbjct: 168 RYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVAS 227
Query: 120 --------------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
D+ N +I+ Y + L A+ +F+ M RD
Sbjct: 228 ILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRD 287
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ--NGRIEEACML 207
+VSWN++++ Y QN A R F M + + ++ L + + Q + RI + +
Sbjct: 288 LVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILG 347
Query: 208 FESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
F + W +VV N+L+ + K + A +FD++P +D +SWNT++TGY QN +
Sbjct: 348 FVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLAS 407
Query: 265 EA----------------------------------------QRLFEEAPVKDVFTWTAM 284
EA +L + + DVF T +
Sbjct: 408 EAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCL 467
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA--- 341
+ Y + G++++A +F +P +V WNA+IA R + A +LF+ M + V
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADH 527
Query: 342 -SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFI 395
++ ++++ + SG + + FD M + I + ++ ++GY E + L
Sbjct: 528 ITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVR 587
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
M + + S + ++LS C + ELG +L++V E
Sbjct: 588 NMPI---QPDASIWGALLSACKIYGNAELGTLASDRLLEVDSE 627
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 154/369 (41%), Gaps = 64/369 (17%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N I + + G A VF+ M R VS+N++I+ Y N A + F
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313
Query: 118 MP----------------------------------------QRDLVSWNVMISGYVRNK 137
M +D+V N +++ Y +
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE-----KNEISWNGLL 192
++ A +F+ +P++D +SWNT+++GY QNG A A ++ M E N+ +W ++
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433
Query: 193 AAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
AY G +++ L ++ +V L+ + K RL DA +F +P V
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV 493
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
WN +I + EA +LF++ + D T+ +++S +G VDE + FD M
Sbjct: 494 PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIM 553
Query: 305 PEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMIT-----GYAQS 353
++ + + M+ + ++ A EL M + AS W +++ G A+
Sbjct: 554 QKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAEL 613
Query: 354 GEITHARNL 362
G + R L
Sbjct: 614 GTLASDRLL 622
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 135/317 (42%), Gaps = 25/317 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + G + A VF+ +PR+ ++S+N +++GY NG A ++
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415
Query: 118 MPQ-RDLV----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNG 168
M + RD + +W +I Y +L + + K DV ++ Y + G
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCG 475
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMG 224
+ A +F + + WN ++A+ +GR EEA LF+ + + +++ SL+
Sbjct: 476 RLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLS 535
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DV 278
+ + + FD M + + M+ + YL +A L P++ D
Sbjct: 536 ACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNT--VSWNAMIAG-YVQTKRMD---MARELF 332
W A++S G + + D + E ++ V + +++ Y T++ + R L
Sbjct: 596 SIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLA 655
Query: 333 EAMTCKNVASWNTMITG 349
+ W++++ G
Sbjct: 656 RDRGLRKTPGWSSVVVG 672
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F ++ ++C N+ + K+LH L+ G + L+ +Y G + + F+ I
Sbjct: 25 FNALFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 469 DKDVISWNTMIAGYARHGFGKDAL----MLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
K++ SWN++I+ Y R G +A+ LF ++PD T IL AC +
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGK 141
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL-G 583
K + M + V + +V L R G LD A + +MP + D +W A++ G
Sbjct: 142 KVHCCVFKMGFEDDVFVAAS----LVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISG 196
Query: 584 ACR 586
C+
Sbjct: 197 FCQ 199
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/660 (36%), Positives = 370/660 (56%), Gaps = 19/660 (2%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
SL AR +F+ +PK + +WNT++ YA + F M+ +++ N ++
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 198 NGRIEEAC---------MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
E + M +S +V NSL+ + L A +F + +D V
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
SWN+MI G+ Q +A LF++ +DV T ++S + ++ R + +
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 305 PEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
E N NAM+ Y + ++ A+ LF+AM K+ +W TM+ GYA S + AR
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANL 419
+ + MPQ D ++W A+I+ Y Q+G ++L +F E++ + +LN+ S LS CA +
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+LELG+ +H + K G V +AL+ MY KCG +E++ F + +DV W+ MI
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
G A HG G +A+ +F M+ +KP+ +T + ACSHTGLV++ F+ M +YG+
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 498
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P KHY C+VD+LGR+G L++A ++ MP P + WGALLGAC+++ LAE A
Sbjct: 499 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 558
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP N G +VLLSN+YA G+W +VS++R MR G+KK G S +E+ +H F
Sbjct: 559 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 618
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE-KEHMLRYHSEKLAVAY 718
GD HP +++Y L E+ KLK +G+ VL + EEE KE L HSEKLA+ Y
Sbjct: 619 SGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICY 678
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G++S A + IRV+KNLRVC DCH+ K IS++ R II+RD RFHHF G CSC D+W
Sbjct: 679 GLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 168/328 (51%), Gaps = 17/328 (5%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+ N +I Y L +A +F + ++DVVSWN+M++G+ Q G D A +F +M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 181 ---LEKNEISWNGLLAAYVQNGRIE---EAC-MLFESKANWEVVSWNSLMGGFVKQKRLG 233
++ + ++ G+L+A + +E + C + E++ N + N+++ + K +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
DAK +FD M +D V+W TM+ GYA + A+ + P KD+ W A++S Y QNGK
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 294 VDEARMIFDAMPEK-----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWN 344
+EA ++F + + N ++ + ++ Q +++ R + + N +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+I Y++ G++ +R +F+ + + D W+A+I G A G +++ +F +M+ +
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQL 432
N FT+V C++ ++ + L Q+
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQM 492
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 168/330 (50%), Gaps = 26/330 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N++I Y G LD A +VF + ++D+VSWN MI+G+V+ S A LF+ M DV
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEEACM 206
V+ +LS A+ + R++ +E+N ++ N +L Y + G IE+A
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCS-YIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
LF++ + V+W +++ G+ + A+ + + MP +D V+WN +I+ Y QN EA
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 267 QRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMI 316
+F E ++ + T + +S Q G ++ R I + +K+ + N A+I
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI-KKHGIRMNFHVTSALI 407
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----I 372
Y + ++ +RE+F ++ ++V W+ MI G A G A ++F +M + + +
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMK-RYG 401
++ + + +G +++ LF +M+ YG
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 163/386 (42%), Gaps = 60/386 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K A D+ N I + G DSA VF ++ + VS+N+MI+G++ G D A +
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 114 VFDQMPQRD---------------------------------------LVSWNVMISGYV 134
+F +M D L N M+ Y
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
+ S+ A+ LF+ M ++D V+W TML GYA + +AAR + + M +K+ ++WN L++A
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 195 YVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
Y QNG+ EA ++F + ++ S + + L +WI + + +
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIR 397
Query: 250 WNTMITG-----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
N +T Y++ L +++ +F +DVF W+AM+ G +G +EA +F M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 305 PEKNT----VSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGE 355
E N V++ + T +D A LF M + ++ +SG
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 356 ITHARNLFDRMPQHDCIS-WAAIIAG 380
+ A + MP S W A++
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGA 543
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/728 (33%), Positives = 408/728 (56%), Gaps = 55/728 (7%)
Query: 72 MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMIS 131
M C ++ ++ + S Y ++I QL RQ+ ++ L +I+
Sbjct: 1 MSEASCLASPFLYTNSGIHSDSFYASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLIT 57
Query: 132 GYVRNKS----LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEK 183
+ S ++ AR +F+ +P+ V WN ++ GY++N + A ++ +M +
Sbjct: 58 KLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSP 117
Query: 184 NEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ ++ LL A ++Q GR A +F +V N L+ + K +RLG A+ +
Sbjct: 118 DSFTFPHLLKACGGLSHLQMGRFVHA-QVFRLGFEADVFVQNGLIALYAKCRRLGCARTV 176
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
F+ +P+ P + + +WTA+VS Y QNG+ EA
Sbjct: 177 FEGLPL-----------------------------PERTIVSWTAIVSAYAQNGEPVEAL 207
Query: 299 MIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI----TGY 350
IF M + + V+ +++ + + ++ R + ++ + + ++ T Y
Sbjct: 208 EIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMY 267
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A+ G++ A+ LFD+M + I W A+I+GYA++G+++D++ LF EM R + T
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISIT 327
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
S +S CA + SLE + + + + + F+ +AL+ M+ KCGSVE A F+ +D+
Sbjct: 328 SAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDR 387
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
DV+ W+ MI GY HG ++A+ L+ +M+ G+ P+D+T +G+L AC+H+G+V +G +F
Sbjct: 388 DVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFF 447
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
M D+ + P +HY C++DLLGRAG LD+A ++K MP +P WGALL AC+ +
Sbjct: 448 NRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
EL + AA+ +F ++P N G YV LSNLYAA+ W V++VR++M+++G+ K G SW+E
Sbjct: 507 VELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
V+ ++ F VGD HP + I +E +E +LK+ GFV + LHD+ +EE E L H
Sbjct: 567 VRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SE++ +AYG++S P G +R+ KNLR C +CH A K ISK+VGR I++RD NRFHHF G
Sbjct: 627 SERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDG 686
Query: 771 SCSCGDYW 778
CSCGDYW
Sbjct: 687 VCSCGDYW 694
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/716 (36%), Positives = 396/716 (55%), Gaps = 85/716 (11%)
Query: 126 WNV-----MISGYVRNKSLSAARNLFEMMPKR---DVVSWNTMLSGYAQNGYADAARRIF 177
WNV ++S Y R + AR +F+ M +R D+VSWN++++ Y Q G + A ++F
Sbjct: 159 WNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMF 218
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+RM E G+ V + AC + + + V +L G + +G
Sbjct: 219 ERMTEDL-----GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVG---- 269
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
N ++ YA+ + EA ++FE VKDV +W AMV+GY Q G+ D+A
Sbjct: 270 -------------NAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDA 316
Query: 298 RMIFDAMPEK----NTVSWNAMIAGYVQT----KRMDMARELFEAMTCKNVASWNTMITG 349
+F+ + E+ N V+W+A+IAGY Q + +D+ R++ + NV + ++++G
Sbjct: 317 LGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSG 376
Query: 350 YAQSGEITH------------------------------------------ARNLFDRMP 367
A +G + H AR +FD +P
Sbjct: 377 CALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIP 436
Query: 368 QHD--CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLE 423
D ++W +I G AQ G + ++L LF +M + + + FT L CA L +L
Sbjct: 437 PKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALR 496
Query: 424 LGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G+Q+H +++ FE+ FV N L+ MY K G V+ A F+ + ++ +SW +++ GY
Sbjct: 497 FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGY 556
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
HG G++AL +F M+ VG+ PD +T V +L ACSH+G+V++G YF MN+D+GV+P
Sbjct: 557 GMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPG 616
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
++HY CMVDLL RAGRLDEA L++ MP +P A W ALL ACR+Y EL E AA +
Sbjct: 617 AEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLL 676
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+E N G Y LLSN+YA + W DV+++R M++ G+KK G SW++ + TF GD
Sbjct: 677 ELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGD 736
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP +IY L +L ++K G+V + LHDV +EEK +L HSEKLA+AYGIL+
Sbjct: 737 WSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILT 796
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIR+ KNLR C DCH+A +IS I+ II+RD++RFHHF GSCSC YW
Sbjct: 797 TAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 227/544 (41%), Gaps = 108/544 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS---VSYNAMISGYLLNGQLDPARQV 114
+W++ N ++ + R G ++A VF+ M R VS+N++++ Y+ G A ++
Sbjct: 158 EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKM 217
Query: 115 FDQMPQ----------------------------------------RDLVSWNVMISGYV 134
F++M + D+ N ++ Y
Sbjct: 218 FERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 277
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
+ + A +FE M +DVVSWN M++GY+Q G D A +F+++ +E N ++W+
Sbjct: 278 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 337
Query: 191 LLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFV--------KQKRLGDAKWI 238
++A Y Q G EA +F + VV+ SL+ G K+ KWI
Sbjct: 338 VIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWI 397
Query: 239 F---DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGK 293
+ P D + N +I Y++ A+ +F+ P KD V TWT ++ G Q+G+
Sbjct: 398 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 457
Query: 294 VDEARMIFD--------AMPEKNTVSWNAMIA---GYVQTKRMDMARELFEAMTCKNVAS 342
+EA +F MP T+S M G ++ R A L +
Sbjct: 458 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 517
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N +I Y++SG++ AR +FD M Q + +SW +++ GY G E++L++F EM++ G
Sbjct: 518 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGL 577
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ F VL C+ H +V G N M G V A H
Sbjct: 578 VPDGVTFVVVLYACS-----------HSGMVDQGI-------NYFNGMNKDFGVVPGAEH 619
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
+ M+ +R G +A+ L M +KP V +LSAC
Sbjct: 620 ------------YACMVDLLSRAGRLDEAMELIRGMP---MKPTPAVWVALLSACRVYAN 664
Query: 523 VEKG 526
VE G
Sbjct: 665 VELG 668
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
H W +I G+ ED L+L+ M+R G R + F VL C + S G +
Sbjct: 89 HTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASV 148
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK---DVISWNTMIAGYARH 485
H + GFE FVGN L+ MY +CG+ E A F+E+ ++ D++SWN+++A Y +
Sbjct: 149 HAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 208
Query: 486 GFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNS 543
G A+ +FE M + +GI+PD +++V +L AC+ G +G + + Y++ G+ +
Sbjct: 209 GDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS--GLFEDV 266
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+VD+ + G ++EA + + M + D +W A++ G+ + A E I E
Sbjct: 267 FVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVSWNAMVTGYSQIGRFDDALGLFEKIRE 325
Query: 604 MEPE 607
+ E
Sbjct: 326 EKIE 329
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/670 (39%), Positives = 380/670 (56%), Gaps = 19/670 (2%)
Query: 127 NVMISGYVRNKSLSAARN-LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
N +I G+ K L L + D N +L G + + RI D+ E N
Sbjct: 14 NRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNI 73
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK--RLGDAKW------ 237
+N ++ V N +E+ ++ S E +S +S FV + R+ D++
Sbjct: 74 FLFNTMIRGLVLNDCFQESIEIYHSMRK-EGLSPDSFTFPFVLKACARVLDSELGVKMHS 132
Query: 238 -IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+ D ++I Y + ++ A ++F++ P K+ +WTA +SGYV GK E
Sbjct: 133 LVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCRE 192
Query: 297 ARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMIT 348
A +F + E ++ S +++ +T + + E +T +NV ++
Sbjct: 193 AIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVD 252
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
Y + G + AR++FD M + + +SW+++I GYA +G +++L LF +M G + +
Sbjct: 253 FYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYA 312
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
VL +CA L +LELG + F +G AL+ MY KCG ++ A+ F +
Sbjct: 313 MVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR 372
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
KD + WN I+G A G KDAL LF M+ GIKPD T VG+L AC+H GLVE+G
Sbjct: 373 KKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRR 432
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF SM + + P +HY CMVDLLGRAG LDEA L+K+MP E +A WGALLG CRL+
Sbjct: 433 YFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
T+L E + + +EP ++G YVLLSN+YAAS +W + +K+R M +RGVKK+ GYSW
Sbjct: 493 RDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSW 552
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
+EV VH F VGDT HP ++IYA L EL LK G+V +T VL D+ EEEKEH +
Sbjct: 553 IEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIG 612
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
HSEKLAVA+G++S I V+KNLRVC DCH AIKHIS+I GR II+RDNNRFH F+
Sbjct: 613 CHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFT 672
Query: 769 GGSCSCGDYW 778
G CSC DYW
Sbjct: 673 DGLCSCKDYW 682
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 182/422 (43%), Gaps = 36/422 (8%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMP 150
+N MI G +LN + +++ M + D ++ ++ R + ++
Sbjct: 76 FNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVV 135
Query: 151 KR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM 206
K D ++++ Y + G+ D A ++FD + +KN SW ++ YV G+ EA
Sbjct: 136 KAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAID 195
Query: 207 LFESKANWEVVSWN-SLMGGFVKQKRLGD---AKWIFDRMP----VRDEVSWNTMITGYA 258
+F + + SL+ KR GD +WI + + VR+ ++ Y
Sbjct: 196 MFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYG 255
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-RMIFDAMPEKNTVSWNAMIA 317
+ + A+ +F+ K++ +W++M+ GY NG EA + F + E AM+
Sbjct: 256 KCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVG 315
Query: 318 GYVQTKRM------DMARELFEAMT-CKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
R+ D A L N +I YA+ G + A +F M + D
Sbjct: 316 VLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKD 375
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+ W A I+G A SG+ +D+L LF +M++ G + +R+ F +L C + +E G++
Sbjct: 376 RVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFN 435
Query: 431 QLVKVGF------EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYA 483
+ V GC V + + G ++EA+ + + ++ + I W ++ G
Sbjct: 436 SMECVFTLTPEIEHYGCMVD-----LLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCR 490
Query: 484 RH 485
H
Sbjct: 491 LH 492
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 150/341 (43%), Gaps = 30/341 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ----LDPARQVFDQMPQRDL 123
I + + G D+A VF+ +P ++ S+ A ISGY+ G+ +D R++ + + D
Sbjct: 150 INLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDS 209
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDR 179
S ++S R L + + E + + R+V ++ Y + G + AR +FD
Sbjct: 210 FSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDG 269
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV-VSWNSLMGGFVKQKRLGD---A 235
MLEKN +SW+ ++ Y NG +EA LF N + +++G RLG
Sbjct: 270 MLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELG 329
Query: 236 KWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
W + + + + V +I YA+ + A +F KD W A +SG +
Sbjct: 330 DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMS 389
Query: 292 GKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC-----KNV 340
G V +A +F M P++NT + ++ ++ R F +M C +
Sbjct: 390 GHVKDALGLFGQMEKSGIKPDRNT--FVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEI 447
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ M+ ++G + A L MP + + I W A++ G
Sbjct: 448 EHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGG 488
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 278/834 (33%), Positives = 427/834 (51%), Gaps = 135/834 (16%)
Query: 37 SKKTLKRHLNSKSRNKP-----KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS 91
+ T+K N KP KPA D + ++ I C DS NS R
Sbjct: 42 TTTTIKLKFNGPDSPKPTSIHTKPASDVNPLPYSSLI-----QDCIDS-----NSFQRGK 91
Query: 92 SVSYNAMIS------GYLL---------NGQLDP---ARQVFDQMPQRDLVSWNVMISGY 133
S+ + MIS YL+ +G LD AR++F++MP+R+L +WN MI Y
Sbjct: 92 SI-HTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAY 150
Query: 134 VRNKSLSAARNLFEMMPK---------------------------------------RDV 154
R A +F+ M K D
Sbjct: 151 ARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDT 210
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF------ 208
N ++ YA+ ++ ++FD M E+N+++WN +++A Q G +A +LF
Sbjct: 211 FVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQES 270
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG-----YAQNNYL 263
E + ++ +L+ Q+ + I + +R ++ N ++ Y++ L
Sbjct: 271 EDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL-IRANITKNIIVETELVHMYSECGRL 329
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGY 319
A+ +F ++ ++W +M+ GY QNG+ EA +F M + + S ++M++
Sbjct: 330 NYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 389
Query: 320 VQTKRMDMARELFEAMTCKNVASWNTM----------ITGYAQSGEITHARNLFDRMPQH 369
V REL N NTM + YA+ G + +A ++D+ +
Sbjct: 390 VSLSDSQKGREL------HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKK 443
Query: 370 D--CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
D W +I+AGYA G ++S F+EM + T V T NL LE
Sbjct: 444 DRNTALWNSILAGYANKGLKKESFNHFLEMLE--SDIEYDVLTMV--TIVNLLVLE---- 495
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
AL+ MY KCG++ +A F+ + K+++SWN MI+GY++HG
Sbjct: 496 -----------------TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGC 538
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
K+AL+L+E M G+ P+++T + ILSACSHTGLVE+G F SM DY + ++HYT
Sbjct: 539 SKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYT 598
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
CMVDLLGRAGRL++A+ ++ MP EP+ +TWGALLGACR++ ++ AA+ +FE++P+
Sbjct: 599 CMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQ 658
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
N G YV++SN+YAA+GRW +V +R M+ +GVKK G SW+E+ +++ F G HP+
Sbjct: 659 NPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPK 718
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY---HSEKLAVAYGILSIP 724
+ IY L L + K G++ T +L +V + ++E Y HSE+LA++ G++S+P
Sbjct: 719 TEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLP 778
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IRV KNLR+C DCH A K ISKI GR II RD NRFHHF G CSCGDYW
Sbjct: 779 KKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 263/716 (36%), Positives = 395/716 (55%), Gaps = 85/716 (11%)
Query: 126 WNV-----MISGYVRNKSLSAARNLFEMMPKR---DVVSWNTMLSGYAQNGYADAARRIF 177
WNV ++S Y R + AR +F+ M +R D+VSWN++++ Y Q G + A ++F
Sbjct: 178 WNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMF 237
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+RM E G+ V + AC + + + V +L G + +G
Sbjct: 238 ERMTEDL-----GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVG---- 288
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
N ++ YA+ + EA ++FE VKDV +W AMV+GY Q G+ D+A
Sbjct: 289 -------------NAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDA 335
Query: 298 RMIFDAMPEK----NTVSWNAMIAGYVQT----KRMDMARELFEAMTCKNVASWNTMITG 349
+F+ + E+ N V+W+A+IAGY Q + +D+ R++ + NV + ++++G
Sbjct: 336 LGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSG 395
Query: 350 YAQSGEITH------------------------------------------ARNLFDRMP 367
A +G + H AR +FD +P
Sbjct: 396 CASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIP 455
Query: 368 QHD--CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLE 423
D ++W +I G AQ G + ++L LF +M + + + FT L CA L +L
Sbjct: 456 PKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALR 515
Query: 424 LGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G+Q+H +++ FE+ FV N L+ MY K G V+ A F+ + ++ +SW +++ GY
Sbjct: 516 FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGY 575
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
HG G++AL +F M+ V + PD +T V +L ACSH+G+V++G YF MN+D+GV+P
Sbjct: 576 GMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPG 635
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
++HY CMVDLL RAGRLDEA L++ MP +P A W ALL ACR+Y EL E AA +
Sbjct: 636 AEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLL 695
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+E N G Y LLSN+YA + W DV+++R M++ G+KK G SW++ + TF GD
Sbjct: 696 ELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGD 755
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP +IY L +L ++K G+V + LHDV +EEK +L HSEKLA+AYGIL+
Sbjct: 756 WSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILT 815
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIR+ KNLR C DCH+A +IS I+ II+RD++RFHHF GSCSC YW
Sbjct: 816 TAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 228/547 (41%), Gaps = 109/547 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS---VSYNAMISGYLLNGQLDPARQV 114
+W++ N ++ + R G ++A VF+ M R VS+N++++ Y+ G A ++
Sbjct: 177 EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKM 236
Query: 115 FDQMPQ----------------------------------------RDLVSWNVMISGYV 134
F++M + D+ N ++ Y
Sbjct: 237 FERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 296
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
+ + A +FE M +DVVSWN M++GY+Q G D A +F+++ +E N ++W+
Sbjct: 297 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 356
Query: 191 LLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFV--------KQKRLGDAKWI 238
++A Y Q G EA +F + VV+ SL+ G K+ KWI
Sbjct: 357 VIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWI 416
Query: 239 F---DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGK 293
+ P D + N +I Y++ A+ +F+ P KD V TWT ++ G Q+G+
Sbjct: 417 LNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 476
Query: 294 VDEARMIFD--------AMPEKNTVSWNAMIA---GYVQTKRMDMARELFEAMTCKNVAS 342
+EA +F MP T+S M G ++ R A L +
Sbjct: 477 ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 536
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N +I Y++SG++ AR +FD M Q + +SW +++ GY G E++L++F EM++
Sbjct: 537 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXL 596
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ F VL C+ H +V G N M G V A H
Sbjct: 597 VPDGVTFVVVLYACS-----------HSGMVDQGI-------NYFNGMNKDFGVVPGAEH 638
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
+ M+ +R G +A+ L M +KP V +LSAC
Sbjct: 639 ------------YACMVDLLSRAGRLDEAMELIRGMP---MKPTPAVWVALLSACRVYAN 683
Query: 523 VEKGTEY 529
VE G EY
Sbjct: 684 VELG-EY 689
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
H W +I G+ ED L+L+ M+R G R + F VL C + S G +
Sbjct: 108 HTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASV 167
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK---DVISWNTMIAGYARH 485
H + GFE FVGN L+ MY +CG+ E A F+E+ ++ D++SWN+++A Y +
Sbjct: 168 HAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 227
Query: 486 GFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNS 543
G A+ +FE M + +GI+PD +++V +L AC+ G +G + + Y++ G+ +
Sbjct: 228 GDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS--GLFEDV 285
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+VD+ + G ++EA + + M + D +W A++ G+ + A E I E
Sbjct: 286 FVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVSWNAMVTGYSQIGRFDDALGLFEKIRE 344
Query: 604 MEPE 607
+ E
Sbjct: 345 EKIE 348
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/742 (34%), Positives = 409/742 (55%), Gaps = 52/742 (7%)
Query: 60 DIRQWNVAITTHMRNG----CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN A++ ++ G D + + NS +++ M++ L+ +Q+
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 116 DQMPQRDL---VS-WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + L VS N +I+ YV+ S+S AR++F M + D++SWNTM+SG +G +
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
+ +F +L + LL + AC +SL GG+ +
Sbjct: 1019 CSVGMFVHLLR------DSLLPDQFTVASVLRAC--------------SSLEGGYYLATQ 1058
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
+ V D +I Y++ + EA+ LF D+ +W A++ GY+ +
Sbjct: 1059 IHACA--MKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVS 1116
Query: 292 GKVDEARMIFDAMPEK----------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
G +A ++ M E N + G Q K++ A+ K
Sbjct: 1117 GDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQI-------HAVVVKRGF 1169
Query: 342 SWNTMITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+ + +T Y + GE+ AR +F +P D ++W +I+G ++G E +L + +
Sbjct: 1170 NLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQ 1229
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ + + F +++ C+ L +LE G+Q+H +VK+ FV +L+ MY KCG+
Sbjct: 1230 MRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGN 1289
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+E+A F+ + + SWN MI G A+HG K+AL F+ MK+ G+ PD +T +G+LSA
Sbjct: 1290 IEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSA 1349
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH+GLV + E FYSM ++YG+ P +HY+C+VD L RAGR++EA+ ++ +MPFE A+
Sbjct: 1350 CSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASAS 1409
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+ LL ACR+ E ++ AE + +EP ++ YVLLSN+YAA+ +W +V+ R MR
Sbjct: 1410 MYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMR 1469
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
VKK G+SW++++NKVH F GD H E D IY +E + +++++G+V T L
Sbjct: 1470 KVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALV 1529
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
DV EE+KE L YHSEKLA+AYG++ P +RV+KNLRVC DCH+AIK+ISK+ R I
Sbjct: 1530 DVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREI 1589
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
+LRD NRFHHF G CSCGDYW
Sbjct: 1590 VLRDANRFHHFRNGICSCGDYW 1611
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 146/583 (25%), Positives = 251/583 (43%), Gaps = 80/583 (13%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ +S+P+ S+ A+ + L G+ AR + D N +I+ Y + SLS+
Sbjct: 651 HLIHSLPQCFSILRQAIAASDLSLGKRAHAR-ILTSGHHPDRFVTNNLITMYAKCGSLSS 709
Query: 142 ARNLFEMMP--KRDVVSWNTMLSGYAQNGYADAARRIFD--RMLEKNEISWNGLLAAYVQ 197
AR LF+ P RD+V+WN +LS A +AD + F R+L ++ +S A V
Sbjct: 710 ARKLFDTTPDTNRDLVTWNAILSALA--AHADKSHDGFHLFRLLRRSVVSTTRHTLAPVF 767
Query: 198 NGRIEEACMLFESKA--------------NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ C+L S + W+V +L+ + K + +A+ +FD M
Sbjct: 768 -----KMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA 822
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEE-----------------APVK---------- 276
VRD V WN M+ Y EA LF E VK
Sbjct: 823 VRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQ 882
Query: 277 ----------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMI 316
DV W +S ++Q G+ EA F M + +++ M+
Sbjct: 883 FKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVML 942
Query: 317 AGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
+++ +++ + + V+ N +I Y ++G ++ AR++F +M + D I
Sbjct: 943 TVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLI 1002
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL-ASLELGKQLHGQ 431
SW +I+G SG E S+ +F+ + R ++ SVL C++L L Q+H
Sbjct: 1003 SWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHAC 1062
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+K G FV AL+ +Y K G +EEA F D+ SWN ++ GY G A
Sbjct: 1063 AMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKA 1122
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L L+ M+ G + D IT+V A +++G + +++ G + + ++D
Sbjct: 1123 LRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQ-IHAVVVKRGFNLDLFVTSGVLD 1181
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ + G ++ A+ + +P PD W ++ C G+ E A
Sbjct: 1182 MYLKCGEMESARRVFSEIP-SPDDVAWTTMISGCVENGQEEHA 1223
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/635 (38%), Positives = 372/635 (58%), Gaps = 38/635 (5%)
Query: 176 IFDRMLEKNEI-SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ----- 229
+F+R ++K ++ SWN ++A ++G EA + F S + S +K
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 230 -----KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
K+ ++F D + +I Y+ L +A+++F+E P +D+ +WT+M
Sbjct: 91 DIFSGKQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSM 148
Query: 285 VSGYVQNGKV----------------DEARMIFDAMPEKNTVSWNAMIA--GYVQTKRMD 326
+ GY NG D+ M D+M + +S + + G ++
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGE--ITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ + F+ + V+ NT++ YA+ GE + AR +FD++ D +S+ +I++ YAQS
Sbjct: 209 VIKRGFD----RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 385 GYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G S ++ +F + K N ++VL ++ +L +GK +H Q++++G E V
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
G +++ MYCKCG VE A AF+ + +K+V SW MIAGY HG AL LF +M G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ IT V +L+ACSH GL +G +F +M +GV P +HY CMVDLLGRAG L +A
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+L++ M +PD+ W +LL ACR++ ELAE + +FE++ N G Y+LLS++YA +G
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW DV +VR+ M++RG+ K G+S LE+ +VH F +GD HP++++IY +L EL KL
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+V +T V HDV EEEKE LR HSEKLA+A+GI++ G + V+KNLRVC DCHN
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IK ISKIV R ++RD RFHHF G CSCGDYW
Sbjct: 625 VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 178/381 (46%), Gaps = 40/381 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSS--VSYNAMISGYLLNGQLDPA 111
D+ WN I R+G AL F+SM P RSS + A S + +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA- 170
+Q F Q D+ + +I Y L AR +F+ +PKRD+VSW +M+ GY NG A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159
Query: 171 DAARRIFDRMLEKNE------ISWNGLLAAYVQNGRI-----EEACMLFESKANWE--VV 217
DA D ++++N+ + GL++ R+ E+ F K ++ V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 218 SWNSLMGGFVK--QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
N+L+ + K + + A+ IFD++ +D VS+N++++ YAQ+ EA +F
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 276 KDVFTWTAMV----------SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
V T+ A+ SG ++ GK ++I + E + + ++I Y + R+
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL-EDDVIVGTSIIDMYCKCGRV 338
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGY 381
+ AR+ F+ M KNV SW MI GY G A LF M + + I++ +++A
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 382 AQSGYSEDSLRLFIEMK-RYG 401
+ +G + R F MK R+G
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFG 419
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/758 (35%), Positives = 416/758 (54%), Gaps = 60/758 (7%)
Query: 80 ALHVF-NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYV 134
A VF NS + YN++I GY +G + A +F +M D ++ +S
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 135 RNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
++++ + ++ K +D+ N+++ YA+ G D+AR++FD M E+N +SW
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNS-----LMGGFVKQKRL--GDAKWIFDR-- 241
++ Y + ++A LF E V+ NS ++ K + L G+ + F R
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 242 -MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
+ V D + + ++ Y + N + A+RLF+E ++ AM S YV+ G EA +
Sbjct: 266 GIEVND-LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 301 FDAM------PEKNTV-----------------------------SW----NAMIAGYVQ 321
F+ M P++ ++ SW NA+I Y++
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
R D A +F+ M+ K V +WN+++ GY ++GE+ A F+ MP+ + +SW II+G
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 382 AQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Q E+++ +F M+ + G + S+ S C +L +L+L K ++ + K G +
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+G L+ M+ +CG E A F + ++DV +W I A G + A+ LF+ M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G+KPD + VG L+ACSH GLV++G E FYSM + +GV P HY CMVDLLGRAG L+
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA L+++MP EP+ W +LL ACR+ G E+A AAE I + PE G YVLLSN+YA
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 684
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
++GRW D++KVRL M+++G++K G S ++++ K H F+ GD HPE I A L+E+
Sbjct: 685 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
+ G V VL DV E+EK ML HSEKLA+AYG++S G IR++KNLRVC D
Sbjct: 745 RASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSD 804
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH+ K SK+ R IILRDNNRFH+ G CSCGD+W
Sbjct: 805 CHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 356 ITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
++ A+ +F+ + C + ++I GYA SG +++ LF+ M G ++ F LS
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA + G Q+HG +VK+G+ FV N+L+ Y +CG ++ A F+E+ +++V+S
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 475 WNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
W +MI GYAR F KDA+ LF M + + P+ +TMV ++SAC+ +E G E Y+
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG-EKVYAF 261
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
R+ G+ N + +VD+ + +D A+ L
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 226/533 (42%), Gaps = 83/533 (15%)
Query: 31 NTNPYPSKKTLKRHLNSKSRNKPKPAGDW------------DIRQWNVAITTHMRNGCCD 78
N+ P K T L++ ++++ K G D+ N + + G D
Sbjct: 127 NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELD 186
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN-----VMISGY 133
SA VF+ M R+ VS+ +MI GY A +F +M + + V+ N +IS
Sbjct: 187 SARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSG----YAQNGYADAARRIFDRMLEKNEISWN 189
+ + L ++ + + + M+S Y + D A+R+FD N N
Sbjct: 247 AKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCN 306
Query: 190 GLLAAYVQNGRIEEACMLF-------------------ESKANWEVVSW----------- 219
+ + YV+ G EA +F S + + W
Sbjct: 307 AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 366
Query: 220 ---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
N+L+ ++K R A IFDRM + V+WN+++ GY +N + A F
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK-----RM 325
E P K++ +W ++SG VQ +EA +F +M + V+ + + + + +
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 326 DMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
D+A+ ++ + KN V T++ +++ G+ A ++F+ + D +W A I
Sbjct: 487 DLAKWIYYYIE-KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV----- 435
A +G +E ++ LF +M G + + F L+ C++ ++ GK++ ++K+
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 436 -GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
GC V + + G +EEA E++ ++ + + WN+++A G
Sbjct: 606 EDVHYGCMVD-----LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 151/320 (47%), Gaps = 27/320 (8%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WD N I +M+ D+A +F+ M ++ V++N++++GY+ NG++D A + F+ M
Sbjct: 371 WD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAA 173
P++++VSWN +ISG V+ A +F M + D V+ ++ S G D A
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 174 RRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ I+ +EKN I + L+ + + G E A +F S N +V +W + +G
Sbjct: 490 KWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 229 QKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF------EEAPVKDV 278
A +FD M + D V++ +T + + + + +F +DV
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM---ARELFEA 334
+ MV + G ++EA + + MP E N V WN+++A ++M A E +
Sbjct: 609 H-YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV 667
Query: 335 MTCKNVASWNTMITGYAQSG 354
+ + S+ + YA +G
Sbjct: 668 LAPERTGSYVLLSNVYASAG 687
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/563 (42%), Positives = 342/563 (60%), Gaps = 40/563 (7%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
++ G Q L + +F F +++ YV+ G +DEAR +FD MP++N VSW
Sbjct: 27 LVRGAVQQARLVH-EHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSW 85
Query: 313 NAMIAGYVQT----KRMD----MARE----------------------------LFEAMT 336
MI+ Y + K +D M RE + +
Sbjct: 86 TTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHGSILKVGL 145
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+V + +I Y++ GE A N+F+ M D + W +II G+AQ+ +++L L+
Sbjct: 146 ESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKR 205
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
MKR ++S TSVL C LA LELG+Q+H ++K ++ + NALL MYCKCGS
Sbjct: 206 MKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGS 263
Query: 457 VEEAYHAFEEIV-DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+E+A F ++ +KDVISW+TMIAG A++GF DAL LFE+MK+ G KP+ IT++G+L
Sbjct: 264 LEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLF 323
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH GLV G YF SM +G+ P +HY C++DLLGRAG+LDEA L+ M EPDA
Sbjct: 324 ACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDA 383
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
TW LLGACR++ +LA AA+ I +++P +AG Y+LLSN+YA S +W DV++VR KM
Sbjct: 384 VTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKM 443
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
R RGVKK G SW+EV +VH F +GD HP + I L +L +L + G+V T VL
Sbjct: 444 RTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVL 503
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
D+ E+ E L+YHSEKLA+ +G++S+P + I + KNLR+C DCH K +S++ R+
Sbjct: 504 QDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRV 563
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
I++RD R+HHF GG CSCGDYW
Sbjct: 564 IVIRDPIRYHHFRGGVCSCGDYW 586
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 173/444 (38%), Gaps = 89/444 (20%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
HVF++ + N +I+ Y+ G LD AR +FD+MP R++VSW MIS Y +
Sbjct: 41 HVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHK 100
Query: 142 ARNLFEMMPKR------------------------------------DVVSWNTMLSGYA 165
A + +M + DV + ++ Y+
Sbjct: 101 ALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYS 160
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--------------- 210
+ G A +F+ M+ + + WN ++ + QN +E L++
Sbjct: 161 KLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTS 220
Query: 211 ----------------------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDE 247
K + +++ N+L+ + K L DA +F RM +D
Sbjct: 221 VLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDV 280
Query: 248 VSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+SW+TMI G AQN + A+A +LFE + P + T ++ G V++ F +
Sbjct: 281 ISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQS 340
Query: 304 MPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG---YAQSG 354
M E + + +I + ++D A +L M + + +W ++ +
Sbjct: 341 MKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVD 400
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+A ++ D ++ + YA S ED + +M+ G + + P S +
Sbjct: 401 LAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRG--VKKDPGCSWIE 458
Query: 415 TCANLASLELGKQLHGQLVKVGFE 438
+ + LG H ++ ++ E
Sbjct: 459 VSKQVHAFILGDNSHPRIEEIKRE 482
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
++ ++ C +++ + +H + G+E F+ N L+ MY K G ++EA + F+E+
Sbjct: 19 YSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP 78
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
D++V+SW TMI+ Y+ AL M G++P+ T +L AC GL+
Sbjct: 79 DRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACD--GLL--NLR 134
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+ G+ + + ++D + G +A N+ M D W +++G
Sbjct: 135 QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLVVWNSIIGG 189
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 21/257 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + I T+ + G AL+VFN M V +N++I G+ N D ++ +M
Sbjct: 148 DVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMK 207
Query: 120 QRDLVSWNVMISGYVRNKS----LSAARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAA 173
+ D V+ ++ +R + L R + + K +D++ N +L Y + G + A
Sbjct: 208 RADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDA 267
Query: 174 RRIFDRML-EKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKR 231
+F RM+ EK+ ISW+ ++A QNG +A LFE+ K+ ++ +++G
Sbjct: 268 NLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSH 327
Query: 232 LG---DAKWIFDRM-------PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFT 280
G D + F M P R+ + +I + L EA +L E + D T
Sbjct: 328 AGLVNDGWYYFQSMKEHFGIDPGREH--YGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVT 385
Query: 281 WTAMVSGYVQNGKVDEA 297
W ++ + VD A
Sbjct: 386 WRILLGACRVHKNVDLA 402
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/556 (41%), Positives = 345/556 (62%), Gaps = 11/556 (1%)
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G V+Q R+ A + V N ++ YA+ L +A+R+F+E P KD+ TWTA+
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 285 VSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-- 338
++G+ QN + +A ++F M + N + ++++ +D +L A K
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQL-HAFCLKYG 219
Query: 339 ---NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
+V + ++ YA+ G + A+ FD MP +SW A+I+G+A+ G E +L L
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLW 279
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+M+R + ++SVLS CA++ +LE GK +H ++K G + F+GN LL MY K G
Sbjct: 280 KMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
S+++A F+ +V DV+SWNTM+ G A+HG GK+ L FE M +GI+P++I+ + +L+
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH+GL+++G YF M + Y V P+ HY VDLLGR G LD A+ ++ MP EP A
Sbjct: 400 ACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTA 458
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
A WGALLGACR++ EL AAE FE++P ++G +LLSN+YA++GRW DV+KVR M
Sbjct: 459 AVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMM 518
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
++ GVKK SW+E++N VH F D HP I EE+ K+K+ G+V T VL
Sbjct: 519 KESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVL 578
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
V ++E+E L+YHSEKLA+A+ +L+ P G PIR+ KN+RVC DCH AIK +SK+V R
Sbjct: 579 LFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDRE 638
Query: 756 IILRDNNRFHHFSGGS 771
II+RD NRFH F GS
Sbjct: 639 IIVRDTNRFHRFRDGS 654
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 222/494 (44%), Gaps = 39/494 (7%)
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G + G++ A V LV N++++ Y + L AR +F+ MP +D+V+W +
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 161 LSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACML--FESKANW 214
++G++QN A +F +ML + N + + LL A ++ L F K +
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 215 E--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ V ++L+ + + + A+ FD MP + EVSWN +I+G+A+ A L +
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 273 APVKDV----FTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
K+ FT+++++S G ++ GK A MI + + N ++ Y +
Sbjct: 281 MQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIG-NTLLDMYAKAG 339
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIA 379
+D A+ +F+ + +V SWNTM+TG AQ G + F++M + + IS+ ++
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
+ SG ++ L F MK+Y + + + + + L+ ++ + ++ E
Sbjct: 400 ACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERF---IREMPIEP 456
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV-ISWNTMIAG--YARHGFGKDALMLFE 496
V ALL ++E +A E + D S M+ YA G +D + +
Sbjct: 457 TAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRK 516
Query: 497 SMKTVGIKP---------DDITMVGILSACSHTGLVE-KGT-EYFYSMNRDYGVIPNSKH 545
MK G+K ++ + + + +H + E +G E ++ G +P++ H
Sbjct: 517 MMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSH 576
Query: 546 YTCMVDLLGRAGRL 559
VD R +L
Sbjct: 577 VLLFVDQQEREEKL 590
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 145/345 (42%), Gaps = 58/345 (16%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM--- 149
V N +++ Y G LD AR++FD+MP +D+V+W +I+G+ +N A LF M
Sbjct: 124 VLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRL 183
Query: 150 ---PKRDVVSWNTMLSG---------------------------------YAQNGYADAA 173
P +S SG YA+ G+ DAA
Sbjct: 184 GFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAA 243
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--ESKANWEVV--SWNSLMGGFVKQ 229
+ FD M K+E+SWN L++ + + G E A L + N++ +++S++
Sbjct: 244 QLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASI 303
Query: 230 KRLGDAKWIFDRMPVRDEVSW-----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
L KW+ M ++ + NT++ YA+ + +A+R+F+ DV +W M
Sbjct: 304 GALEQGKWVHAHM-IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362
Query: 285 VSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAM----T 336
++G Q+G E F+ M E N +S+ ++ + +D FE M
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKV 422
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+V + T + + G + A MP + W A++
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGA 467
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 133/291 (45%), Gaps = 51/291 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N+ + + + GC D A +F+ MP + V++ A+I+G+ N + A +F QM
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQ 186
Query: 119 --------------------PQRDLVSW-------------NVMISGYVRNKSLSAARNL 145
P L ++ + ++ Y R + AA+
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRI 201
F+ MP + VSWN ++SG+A+ G + A + +M KN +++ +L+A G +
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGAL 306
Query: 202 EEACMLFES--KANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
E+ + K+ +++++ N+L+ + K + DAK +FDR+ D VSWNTM+TG
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGC 366
Query: 258 AQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
AQ+ E FE+ + ++ +++ +G +DE F+ M
Sbjct: 367 AQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM 417
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 27/235 (11%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQMP 119
WN I+ H R G + ALH+ M R+ + +Y++++S G L+ + V M
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 120 QR--DLVSW--NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ L+++ N ++ Y + S+ A+ +F+ + K DVVSWNTML+G AQ+G
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 176 IFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV-------VSWNSLMG 224
F++ML E NEIS+ +L A +G ++E FE ++V V++ L+G
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLG 437
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLA----EAQRLFEEAP 274
+ L A+ MP+ + W ++ + + A+R FE P
Sbjct: 438 ---RVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDP 489
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 341/538 (63%), Gaps = 3/538 (0%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR--IEEACM 206
+ R ++ N +S A+ G AARR+FD M ++ +SWN LL A + GR + A
Sbjct: 10 LAARRLLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARR 69
Query: 207 LF-ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
LF E+ + +VVSWNS++ G + L A F P R+ +WN M+ G + + +
Sbjct: 70 LFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVD 129
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
AQRLF+E P ++V ++T MV + G+V+ AR +FD+MP++N VSW AMI+G V+
Sbjct: 130 AQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMF 189
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
ARELFEAM KNV + MITG+ + G++ AR LFD + D ISW A+IAGY +G
Sbjct: 190 VEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNG 249
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ E+++RL M R G + + + +VL+ C+ LA L GK H +K E+G N
Sbjct: 250 HGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSN 309
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG+V E+ F + KD++SWNT+IA YA+HG + + LF M+ G+ P
Sbjct: 310 ALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGLIP 369
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
DDIT + +LSAC H G+V+ + F M+ Y + P ++HY C+VD+L RAG+L++A +
Sbjct: 370 DDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSY 429
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+K+MP + + WG+LLGAC+++G +L E AA+++ + + +++G YV+LSN+YAA+G W
Sbjct: 430 IKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGPYVILSNIYAAAGMW 489
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
G V+++R +M++RGVKK GYSW E+ N+VH F GD HPE +I + L ++ F ++
Sbjct: 490 GQVNQIRGQMKERGVKKQPGYSWTEIGNEVHMFVGGDASHPEMRKIISELRKISFHMR 547
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 194/385 (50%), Gaps = 42/385 (10%)
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR--NKSLSAAR 143
S+ R + N IS G + AR+VFD M RD+VSWN +++ R L AAR
Sbjct: 9 SLAARRLLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAAR 68
Query: 144 NLF-EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
LF E MP RDVVSWN++++G +G DAA F E+N +WN +LA V+ GR+
Sbjct: 69 RLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVV 128
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
+A LF+ VVS+ +++ ++ + A+ +FD MP R+ VSW MI+G +N
Sbjct: 129 DAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGM 188
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
EA+ LFE P K+V TAM++G+ + G VD AR +FD + K+ +SWNAMIAGYV
Sbjct: 189 FVEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHN 248
Query: 323 KRMDMAREL---------------------------------------FEAMTCKNVASW 343
+ A L +AM ++
Sbjct: 249 GHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFS 308
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N ++T Y++ G + + +F + D +SW IIA YAQ G + + LF EM+ G
Sbjct: 309 NALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGLI 368
Query: 404 LNRSPFTSVLSTCANLASLELGKQL 428
+ F SVLS C ++ ++ +L
Sbjct: 369 PDDITFLSVLSACGHVGMVDASLKL 393
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 151/299 (50%), Gaps = 43/299 (14%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
A + ++ WN + +R G A +F+ MP R+ VSY M+ G+++ AR+VF
Sbjct: 106 APERNVATWNAMLAGLVRLGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVF 165
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
D MP R+LVSW MISG V N AR LFE MP+++VV+ M++G+ + G D+ARR
Sbjct: 166 DSMPDRNLVSWAAMISGCVENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDVDSARR 225
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEA-----------------------------CM 206
+FD + K+ ISWN ++A YV NG EEA +
Sbjct: 226 LFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALAL 285
Query: 207 LFESKANWEV---------VSW-NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
L + K+ + +S+ N+LM + K +G+++ +F + +D VSWNT+I
Sbjct: 286 LRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAA 345
Query: 257 YAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
YAQ+ + LF E V D T+ +++S G VD + +FD M K +S
Sbjct: 346 YAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAIS 404
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 201/411 (48%), Gaps = 22/411 (5%)
Query: 42 KRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISG 101
+ HL + R + D+ WN I + +G D+A F P R+ ++NAM++G
Sbjct: 61 RHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAG 120
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML 161
+ G++ A+++FD+MP+R++VS+ M+ R + AR +F+ MP R++VSW M+
Sbjct: 121 LVRLGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMI 180
Query: 162 SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
SG +NG AR +F+ M EKN ++ ++ + + G ++ A LF+ +V+SWN+
Sbjct: 181 SGCVENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNA 240
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWN--TMITGYAQNNYLA------EAQRLFEEA 273
++ G+V G+ + R+ V + T+I + LA + +A
Sbjct: 241 MIAGYVHNGH-GEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKA 299
Query: 274 PVKDVFTWT-AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
++ +++ A+++ Y + G V E+ ++F + K+ VSWN +IA Y Q + LF
Sbjct: 300 MLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALF 359
Query: 333 EAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQ 383
M + ++ ++++ G + + LFD M IS +A I+ ++
Sbjct: 360 HEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSR 419
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+G E + M E ++ + S+L C +++LG+ LV+
Sbjct: 420 AGQLEKASSYIKHMPLKAE---KNVWGSLLGACQIHGNVQLGELAAKMLVQ 467
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/675 (36%), Positives = 380/675 (56%), Gaps = 16/675 (2%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+RD+ N +I Y + R +F+ M +R+VVSW +++ GYA+ G A +F
Sbjct: 171 ERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFE 230
Query: 180 MLE----KNEISWNGLLAAY--VQNGRI-EEACMLF-ESKANWEVVSWNSLMGGFVKQKR 231
M+E N ++ G+++A +Q+ ++ E+ C E + + N+L+ ++K
Sbjct: 231 MVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGA 290
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSG 287
+ A+ IFD ++ V +NT+++ Y + LA + + P D T + VS
Sbjct: 291 IDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSA 350
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSW----NAMIAGYVQTKRMDMARELFEAMTCKNVASW 343
+ V + + W NA+I Y++ + +MA +F+ M K SW
Sbjct: 351 CSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSW 410
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N++I G+ ++G++ A +F MP D +SW +I Q ++++ LF M+ G
Sbjct: 411 NSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGIT 470
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
++ V S C L +L+L K +HG + K +G AL+ M+ +CG + A
Sbjct: 471 ADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQV 530
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F ++V +DV +W I A G G A+ LF+ M GIKPD + V +L+A SH GLV
Sbjct: 531 FNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLV 590
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E+G F SM YG+ P + HY CMVDLLGRAG L EA +L+ +M EP+ WG+LL
Sbjct: 591 EQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLA 650
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
ACR++ ++A AAE I E++PE G++VLLSN+YA++GRW DV+KVRL ++++G K+
Sbjct: 651 ACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKM 710
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G S +E+ K+ F+ GD HPE I L+E+ +L+ G+V VL DV E+EK
Sbjct: 711 PGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEK 770
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E++L HSEKLA+A+ ++S G PIRV KNLR+C DCH+ K +SK R II+RDNNR
Sbjct: 771 EYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNR 830
Query: 764 FHHFSGGSCSCGDYW 778
FH F G CSCGDYW
Sbjct: 831 FHFFQQGFCSCGDYW 845
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 210/470 (44%), Gaps = 38/470 (8%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL----VSWNVMISGY 133
D VF+ M R+ VS+ ++I GY G A +F +M + + V+ +IS
Sbjct: 191 DCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISAC 250
Query: 134 VRNKSLSAARNLF----EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ + L + E+ + + + N ++ Y + G D AR+IFD ++KN + +N
Sbjct: 251 AKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYN 310
Query: 190 GLLAAYVQNGRIEEACM----LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+++ YV+ G E + + + ++ S + + + KW +
Sbjct: 311 TIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRN 370
Query: 246 DEVSW----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
W N +I Y + A R+F+ K +W ++++G+V+NG ++ A IF
Sbjct: 371 GLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIF 430
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS----GEIT 357
AMP+ + VSWN MI VQ A ELF M + + + + G A + G +
Sbjct: 431 SAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALD 490
Query: 358 HARNLFDRMPQHDCISW-----AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
A+ + + + D I + A++ +A+ G + ++++F +M + + S +T+
Sbjct: 491 LAKWIHGYIKKKD-IHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKR----DVSAWTAA 545
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD--- 469
+ A + +L ++++ G + V ALL G VE+ +H F + D
Sbjct: 546 IGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYG 605
Query: 470 --KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+ + M+ R G +AL L SM+ ++P+D+ +L+AC
Sbjct: 606 IAPQAVHYGCMVDLLGRAGLLSEALSLINSMQ---MEPNDVIWGSLLAAC 652
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 113/192 (58%), Gaps = 1/192 (0%)
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
++++I G++ G ++ +F ++ G + F VLS C A+L G Q+HG +V
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K+GFE FV N+L+ Y +CG ++ F+++ +++V+SW ++I GYA+ G K+A+
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LF M VGI+P+ +TMVG++SAC+ ++ G + + + + N+ +VD+
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIG-ELELEVNALMVNALVDMY 285
Query: 554 GRAGRLDEAQNL 565
+ G +D+A+ +
Sbjct: 286 MKCGAIDKARKI 297
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 36/328 (10%)
Query: 34 PYPSKKTLKRHLNSKSRNKPKPAGDW--------DIRQW----NVAITTHMRNGCCDSAL 81
P P + T+ +++ S G W + W N I +M+ G + A
Sbjct: 337 PRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMAC 396
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
VF+ M ++ VS+N++I+G++ NG ++ A ++F MP DLVSWN MI V+
Sbjct: 397 RVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKE 456
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQN----GYADAARRIFDRMLEKNEISWN-----GLL 192
A LF +M + + + G A G D A+ I ++K +I ++ L+
Sbjct: 457 AIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHG-YIKKKDIHFDMHLGTALV 515
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEV 248
+ + G + A +F +V +W + +G + A +FD M + D V
Sbjct: 516 DMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGV 575
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT-------WTAMVSGYVQNGKVDEARMIF 301
+ ++T + + + +F +KD++ + MV + G + EA +
Sbjct: 576 VFVALLTALSHGGLVEQGWHIFRS--MKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLI 633
Query: 302 DAMP-EKNTVSWNAMIAGYVQTKRMDMA 328
++M E N V W +++A K +D+A
Sbjct: 634 NSMQMEPNDVIWGSLLAACRVHKNVDIA 661
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/599 (38%), Positives = 345/599 (57%), Gaps = 40/599 (6%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
N L+ + DA+ FD +P +D V W T+I G + L EA+RL +AP ++V
Sbjct: 144 NPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVV 203
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG-------------------YV 320
+WT++++GY + G+ +A F+ M + G V
Sbjct: 204 SWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLV 263
Query: 321 QTKRMDMARELFEAMT-----CKNVAS----------------WNTMITGYAQSGEITHA 359
KR+ M L A+ C ++A WN +I GY + G + A
Sbjct: 264 GQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVA 323
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R+LFD+M D I++ ++I GY SG D+L+LF++M+R+G R + S+L+ CA+L
Sbjct: 324 RSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASL 383
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+L G+ LH + + E ++G ALL MY KCG V+EA F + ++DV +W MI
Sbjct: 384 GALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMI 443
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
AG A +G GKDAL F MK G +P +T + +L+ACSH+ L+++G +F M + +
Sbjct: 444 AGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKL 503
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P +HY CM+DLL R+G LDEA +L++ MP +P+A WG++L ACR++ +LA AAE
Sbjct: 504 HPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAE 563
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ ++ PE +YV L N+Y S +W D +VR+ M +RGVKK GYS + V +VH F
Sbjct: 564 HLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFV 623
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
D HP I A +EE+ +LK G+ T + DV EEEKE L HSEK+A+A+G
Sbjct: 624 ANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFG 683
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S+P PI ++KNLRVCEDCH+AIK +S++ R II+RD +RFHHF G+CSC D+W
Sbjct: 684 LISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 200/458 (43%), Gaps = 99/458 (21%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
+P + + N +I Y G D AR+ FD++P +D V W +I G VR L AR L
Sbjct: 135 LPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLL 194
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAA-------- 194
P+R+VVSW ++++GY++ G A F+ ML +E++ G L+A
Sbjct: 195 VQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLD 254
Query: 195 ---------------------------YVQNGRIEEACMLFESKANWEVV-SWNSLMGGF 226
Y + G I +A +F++ + WN+++ G+
Sbjct: 255 LGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGY 314
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWT 282
K + A+ +FD+M RD +++N+MITGY + L +A +LF + D FT
Sbjct: 315 CKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVV 374
Query: 283 AMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
++++ G + R + ++ E++ A++ Y++ R+D A +F M +
Sbjct: 375 SLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGER 434
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+V +W M IAG A +G +D+L F +MK
Sbjct: 435 DVHTWTAM-------------------------------IAGLAFNGMGKDALESFCQMK 463
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGK----------QLHGQLVKVGFEAGCFVGNALL 448
R G + + +VL+ C++ + L+ G+ +LH Q+ GC +
Sbjct: 464 RDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHY----GCMID---- 515
Query: 449 VMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ + G ++EA H + + + + + W ++++ H
Sbjct: 516 -LLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVH 552
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 146/318 (45%), Gaps = 34/318 (10%)
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
+P + N +I Y D AR F+ + K+ W T+I G + G + AR L
Sbjct: 135 LPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLL 194
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS-- 421
+ P+ + +SW ++IAGY+++G D++ F M G + LS C+ L +
Sbjct: 195 VQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLD 254
Query: 422 -------------LELGKQLHGQLVKVGFEAGCF---------VG--------NALLVMY 451
+ + L L+ + + G VG NA++ Y
Sbjct: 255 LGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGY 314
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
CK G V+ A F+++ +DVI++N+MI GY G +DAL LF M+ G++ D+ T+V
Sbjct: 315 CKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVV 374
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
+L+AC+ G + G S+ + V + T ++D+ + GR+DEA + M
Sbjct: 375 SLLTACASLGALPHGRALHASIEQRI-VEEDVYLGTALLDMYMKCGRVDEATAVFHRMG- 432
Query: 572 EPDAATWGALLGACRLYG 589
E D TW A++ G
Sbjct: 433 ERDVHTWTAMIAGLAFNG 450
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 157/385 (40%), Gaps = 62/385 (16%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
PA D + W I +R G D A + P R+ VS+ ++I+GY G+ A
Sbjct: 167 PAKDAVV--WATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYC 224
Query: 115 FDQMPQRDLVSWNVMISG---------------------------------------YVR 135
F+ M + V + G Y +
Sbjct: 225 FNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAK 284
Query: 136 NKSLSAARNLFEMMPK-RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
++ A+ +F+ + + + WN ++ GY + G+ D AR +FD+M ++ I++N ++
Sbjct: 285 CGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITG 344
Query: 195 YVQNGRIEEACMLFES-------KANWEVVSWNSLMG--GFVKQKRLGDAKWIFDRMPVR 245
Y+ +GR+ +A LF N+ VVS + G + R A I R+
Sbjct: 345 YIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHAS-IEQRIVEE 403
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D ++ Y + + EA +F +DV TWTAM++G NG +A F M
Sbjct: 404 DVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMK 463
Query: 306 ----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEI 356
+ +V++ A++ + +D R F M V + MI A+SG +
Sbjct: 464 RDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLL 523
Query: 357 THARNLFDRMP-QHDCISWAAIIAG 380
A +L MP Q + + W +I++
Sbjct: 524 DEAMHLVQTMPMQPNAVIWGSILSA 548
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 49/297 (16%)
Query: 51 NKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP 110
KP+P WN I + + G D A +F+ M R +++N+MI+GY+ +G+L
Sbjct: 302 QKPEP--------WNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRD 353
Query: 111 ARQVFDQMPQRDLVSWNV----MISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLS 162
A Q+F QM + + + N +++ +L R L + +R DV +L
Sbjct: 354 ALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLD 413
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
Y + G D A +F RM E++ +W ++A NG ++A
Sbjct: 414 MYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDA------------------ 455
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KD 277
+ F + KR G V++ ++T + ++ L E + F E
Sbjct: 456 LESFCQMKRDGFQP---------TSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQ 506
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFE 333
V + M+ ++G +DEA + MP + N V W ++++ K +D+AR E
Sbjct: 507 VEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAE 563
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 269/777 (34%), Positives = 406/777 (52%), Gaps = 82/777 (10%)
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
F P S N++++ Y G L ARQVFD +P RD VSWN MI+ R + +
Sbjct: 359 FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSL 418
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQ-----NGYADAARRIFDRMLEKNEI---SWNGLLAAY 195
+LF +M +V + L A G +++ L ++ + N L+ Y
Sbjct: 419 HLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVTMY 478
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWN 251
+ GR+ +A LF ++VSWN+++ + R +A M V D V+
Sbjct: 479 ARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLA 538
Query: 252 TMITGYAQNNYLAEAQRLFEEAP-----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
+++ +Q L + + A +++ F TA+V Y + + R++FD +
Sbjct: 539 SVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVR 598
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELF-----EAMTCKNVASW------------------ 343
+ WNA++AGY + + D A LF E+ C N ++
Sbjct: 599 RTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEG 658
Query: 344 -----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
N ++ Y++ G + ++ +F RM + D +SW +I G G
Sbjct: 659 IHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGR 718
Query: 387 SEDSLRLFIEM-KRYGE-----------------RLNRSPFTSVLSTCANLASLELGKQL 428
+D+L L EM +R GE + N +VL CA LA+L GK++
Sbjct: 719 YDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEI 778
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H VK VG+AL+ MY KCG + A F+++ ++VI+WN +I Y HG G
Sbjct: 779 HAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKG 838
Query: 489 KDALMLFESMKTVG------IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
++AL LF M G I+P+++T + I +ACSH+G+V++G F++M +GV P
Sbjct: 839 EEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPR 898
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA-TWGALLGACRLYGKTELAEKAAEVI 601
HY C+VDLLGR+GR+ EA L+ MP + W +LLGACR++ E E AA+ +
Sbjct: 899 GDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHL 958
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
F +EP A YVL+SN+Y+++G W VR KM++ GV+K G SW+E ++VH F G
Sbjct: 959 FVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSG 1018
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D HP+ ++ YLE L +++++G+V VLH+V +EEKE ML HSE+LA+A+G+L
Sbjct: 1019 DASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLL 1078
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ P G IRV KNLRVC DCH A K ISKIV R IILRD RFHHF+ G+CSCGDYW
Sbjct: 1079 NTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W ++ S D++ + M + F +VL A + L LGKQ+H +
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357
Query: 434 KVGF--EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
K G + V N+L+ MY KCG + A F++I D+D +SWN+MIA R + +
Sbjct: 358 KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHT-GLVEKGTE-YFYSM-NRDYGVIPNSKHYTC 548
L LF M + + P T+V + ACSH G V G + + Y++ N D N+
Sbjct: 418 LHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNN----A 473
Query: 549 MVDLLGRAGRLDEAQNLM 566
+V + R GR+++A+ L
Sbjct: 474 LVTMYARLGRVNDAKALF 491
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 144/371 (38%), Gaps = 45/371 (12%)
Query: 33 NPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQ----WNVAITTHMRNGCCDSALHVFNSMP 88
N + + + N K K + D +R+ WN + + RN D AL +F M
Sbjct: 569 NSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMI 628
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ-----------RDLVSWNVMISGYVRNK 137
S NA +L + +VF +D N ++ Y R
Sbjct: 629 SESEFCPNATTFASVLPACVRC--KVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMG 686
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
+ ++ +F M KRD+VSWNTM++G G D A + M + + Y
Sbjct: 687 RVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYED 746
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI----FDRMPVRDEVSWNTM 253
+G + F+ + V+ +++ G LG K I + D + +
Sbjct: 747 DGGVP-----FKPNS----VTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSAL 797
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-------- 305
+ YA+ L A R+F++ P+++V TW ++ Y +GK +EA +F M
Sbjct: 798 VDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNRE 857
Query: 306 --EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-----WNTMITGYAQSGEITH 358
N V++ A+ A + +D LF M + + ++ +SG +
Sbjct: 858 VIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKE 917
Query: 359 ARNLFDRMPQH 369
A L + MP +
Sbjct: 918 AYELINTMPSN 928
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/599 (39%), Positives = 356/599 (59%), Gaps = 40/599 (6%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
N ++ +V+ GDA+ FD +PV+D V+W T+I+G A+ L +A L +P ++V
Sbjct: 144 NPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVI 203
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAM------PEKNTV----------------------- 310
+WT ++SGY + G+ EA F++M P++ TV
Sbjct: 204 SWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLV 263
Query: 311 -SWNAMIAGYVQTKRMDM---------ARELFEAM-TCKNVASWNTMITGYAQSGEITHA 359
+++G + +DM A E+F+A+ + SWN MI GY + G + A
Sbjct: 264 GEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVA 323
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R LFD+M D +++ ++I GY G ++L LF++M+R+ R + S+L+ CA+L
Sbjct: 324 RYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASL 383
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+L G+ LH + + E ++G ALL MY KCG VEEA F+ + +DV +W+ MI
Sbjct: 384 GALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMI 443
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
AG A +G GK AL F MK G +P+ +T + IL+ACSH+ L+++G YF M + +
Sbjct: 444 AGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNI 503
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P +HY CM+DLLGR+G LDEA +L++ MP +P+A W ++L ACR++ LA AAE
Sbjct: 504 RPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAE 563
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ ++EP+ +YV L N+Y S +W D S++R M +RGVKK GYS + V +VH F
Sbjct: 564 HLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFI 623
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
V D HP+ I A +EE+ +LK G+ T + DV EEEKEH L HSEK+A+A+G
Sbjct: 624 VCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFG 683
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S+ P+ ++KNLRVCEDCH+AIK IS+I R II+RD +RFHHF G+CSC D+W
Sbjct: 684 LISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 180/396 (45%), Gaps = 64/396 (16%)
Query: 67 AITTHMRNGCCDSA---------LHV--FNSM-PRRSSVSYNAMISGYLLNGQLDPARQV 114
A T H CC LH F +M P + N +I Y+ G AR+
Sbjct: 103 AFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRA 162
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
FD +P +D V+W +ISG + L A L P R+V+SW ++SGY++ G A A
Sbjct: 163 FDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAV 222
Query: 175 RIFDRML----EKNEISWNGLLAAYVQ-----NGR-----IEEACMLFESKA-------- 212
F+ ML E +E++ GLL+A Q GR + E ML K
Sbjct: 223 DCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMY 282
Query: 213 --------NWEVV----------SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
WEV SWN+++ G+ K + A+++FD+M RD V++N++I
Sbjct: 283 AKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLI 342
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
TGY L EA LF + D+ FT ++++ G + + R + + ++
Sbjct: 343 TGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVE 402
Query: 308 -NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
+ A++ Y++ R++ A +F+AM+ ++V +W+ MI G A +G A F M
Sbjct: 403 VDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWM 462
Query: 367 P----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
Q + +++ AI+ + S ++ F EM+
Sbjct: 463 KVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMR 498
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 164/380 (43%), Gaps = 60/380 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D W I+ + G D A + P R+ +S+ +ISGY G+ A F+ M
Sbjct: 170 DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSML 229
Query: 119 ---PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV-------------------- 155
+ D V+ ++S + K L R+L +++ ++ ++
Sbjct: 230 SDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIG 289
Query: 156 ----------------SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
SWN M+ GY + G+ D AR +FD+M +++ +++N L+ Y+ G
Sbjct: 290 RAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGG 349
Query: 200 RIEEACMLFES-------KANWEVVSWNSLMG--GFVKQKRLGDAKWIFDRMPVRDEVSW 250
R+ EA +LF N+ +VS + G + Q R A I R+ D
Sbjct: 350 RLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHA-CIEQRLVEVDIYLG 408
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----E 306
++ Y + + EA +F+ V+DV TW+AM++G NG A F M +
Sbjct: 409 TALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQ 468
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARN 361
N+V++ A++ + +D R FE M + + + MI +SG + A +
Sbjct: 469 PNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMD 528
Query: 362 LFDRMP-QHDCISWAAIIAG 380
L MP Q + + WA+I++
Sbjct: 529 LVRTMPMQPNAVIWASILSA 548
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 152/360 (42%), Gaps = 43/360 (11%)
Query: 344 NTMITGYAQSG--EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N+++ + + + +A LFDRMP + A+ A + S E L L+ M+R G
Sbjct: 39 NSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTG 98
Query: 402 ERLNRSPFTSVLSTCA-NLASLELGKQLHGQLVKVGFEAGC-FVGNALLVMYCKCGSVEE 459
+ F + CA A + L + LH + + V N ++ MY + G +
Sbjct: 99 VCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGD 158
Query: 460 AYHAFEEIVDKDVISWNT-------------------------------MIAGYARHGFG 488
A AF++I KD ++W T +I+GY+R G
Sbjct: 159 ARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRA 218
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+A+ F SM + GI+PD++T++G+LSAC+ + G + + + G++ + K
Sbjct: 219 AEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRS-LHKLVGEKGMLMSGKLVVA 277
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL-GACRLYGKTELAEKAAEVIFEMEPE 607
++D+ + G + A + + +W A++ G C+L G ++A + +ME
Sbjct: 278 LIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKL-GHVDVARYLFD---QMEDR 333
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMR--DRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
+ + L Y GR + + ++MR D T S L + G LH
Sbjct: 334 DLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALH 393
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 35/285 (12%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR 121
+ WN I + + G D A ++F+ M R V++N++I+GY+ G+L A +F QM +
Sbjct: 305 QSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRH 364
Query: 122 DLVSWN-VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
DL + N M+S SL A +P+ G A + I R+
Sbjct: 365 DLRADNFTMVSLLTACASLGA-------LPQ-----------GRALHAC------IEQRL 400
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+E + LL Y++ GR+EEA ++F++ + +V +W++++ G A F
Sbjct: 401 VEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFF 460
Query: 241 RMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD-----VFTWTAMVSGYVQN 291
M V + V++ ++T + + L E + FEE + + + M+ ++
Sbjct: 461 WMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRS 520
Query: 292 GKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
G +DEA + MP + N V W ++++ K ++AR E +
Sbjct: 521 GLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHL 565
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/669 (37%), Positives = 394/669 (58%), Gaps = 20/669 (2%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN---- 184
+I + + L A LF+ +P+ D+ +W ++SG+ Q+G+ A I+ +L +N
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+ + A +G + A + + N ++V N+L+ F K K + A+ +FD
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG-------YVQNGK 293
M V+D VSW +M Y + LF E + + + VS Y++ G+
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKLGR 196
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
++ + M E N +A++ Y + + AR +F++M +++ SWN M+T Y +
Sbjct: 197 EVHGFILRNEM-EGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLN 255
Query: 354 GEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
E LF +M + + SW A I+G Q+G E +L + +M+ G + NR
Sbjct: 256 KEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITI 315
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
S L C NL SL GK++HG + + F + AL+++Y KCG +E + H F +
Sbjct: 316 VSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPR 375
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
KDV++WNTMI + HG G ++L+LF M G++P+ +T +G+LS CSH+ L ++G
Sbjct: 376 KDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLV 435
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F SM+ ++ + P++ HY+CMVD+L RAGRL+EA + ++ MP EP AA WGALLGACR+Y
Sbjct: 436 FNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYK 495
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
EL AA +FE+EP+NAG YVLLSN+ + +W + S++R MRD+G+ K G SW+
Sbjct: 496 NVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWV 555
Query: 650 EVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY 709
+V+NKV++F GD + +KD IY +L+E++ K++ DG+ +T VL +V +E++E L
Sbjct: 556 QVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCS 615
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSE+LAVA+GIL+ +RV KNLR+C DCHNAIK I+KIVG II+RD+ RFHHF
Sbjct: 616 HSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRD 675
Query: 770 GSCSCGDYW 778
G C+C D+W
Sbjct: 676 GYCTCNDFW 684
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 259/587 (44%), Gaps = 77/587 (13%)
Query: 29 PANTNPYPSKKTLKRHLNSKSRNK--------PKPAGDWDIRQWNVAITTHMRNGCCDSA 80
PAN P S K +K LNS + P+P D+R W + I+ H ++G A
Sbjct: 6 PANLQPCQSIKLIKTCLNSGDLKRALYLFDKIPEP----DLRTWTILISGHTQHGFPKKA 61
Query: 81 LHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVFDQMPQ----RDLVSWNVMISG 132
+ +++++ R+ ++ +G L A+++ D Q +DLV N +I
Sbjct: 62 IDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDM 121
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISW 188
+ + K ++ AR +F+ M +DVVSW +M Y G +F M + N ++
Sbjct: 122 FGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTV 181
Query: 189 NGLLAA---YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+ +L A Y++ GR E + ++ V ++L+ + L A+ +FD M R
Sbjct: 182 SSILPACADYIKLGR-EVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHR 240
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF 301
D VSWN M+T Y N LF + + + +W A +SG +QNG+ + A I
Sbjct: 241 DIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGIL 300
Query: 302 ----DAMPEKNTVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQS 353
D+ + N ++ + + G + + +E+ F ++V ++ YA+
Sbjct: 301 CKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKC 360
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ +R++F+ MP+ D ++W +I + G +SL LF +M G N F VL
Sbjct: 361 GDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVL 420
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S C+ H QL + G V N++ + E + D
Sbjct: 421 SGCS-----------HSQLA----DEGLLVFNSM---------------SSEHSITPDAD 450
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
++ M+ +R G ++A ++ ++ + I+P +L AC VE GT +
Sbjct: 451 HYSCMVDVLSRAGRLEEA---YDFIRKMPIEPTAAAWGALLGACRVYKNVELGT---LAA 504
Query: 534 NRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
++ + + P N+ +Y + ++L A + EA + K M + A T G
Sbjct: 505 SQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPG 551
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 44/204 (21%)
Query: 18 QHTQSINRLQSPANTNPYPSKKTLKRHL----NSKSRNKPKPAGDWDIRQW---NVAITT 70
QH ++ L ++ P++ T+ L N +S K + R W +V ITT
Sbjct: 292 QHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITT 351
Query: 71 HM-----RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS 125
+ + G + + HVFN+MPR+ V++N MI ++G+ L+
Sbjct: 352 ALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGK-----------GGESLIL 400
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
+N M+ V S V++ +LSG + + AD +F+ M ++
Sbjct: 401 FNKMLDSGVEPNS----------------VTFIGVLSGCSHSQLADEGLLVFNSMSSEHS 444
Query: 186 IS-----WNGLLAAYVQNGRIEEA 204
I+ ++ ++ + GR+EEA
Sbjct: 445 ITPDADHYSCMVDVLSRAGRLEEA 468
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/573 (39%), Positives = 356/573 (62%), Gaps = 16/573 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV---- 275
N+L+ + K A +FD MP RD ++W +++T Q N + +F
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 276 -KDVFTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
D F ++A+V G +D R + + + V ++++ Y + ++ A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
+F+++ KN SW M++GYA+SG A LF +P + SW A+I+G+ QSG ++
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 391 LRLFIEMKRYGER---LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+F EM+R ER L+ +S++ CANLA+ G+Q+HG ++ +GF++ F+ NAL
Sbjct: 222 FSVFTEMRR--ERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KC V A F + +DV+SW ++I G A+HG + AL L++ M + G+KP++
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T VG++ ACSH G VEKG E F SM +DYG+ P+ +HYTC++DLLGR+G LDEA+NL+
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAE-VIFEMEPENAGMYVLLSNLYAASGRWG 626
MPF PD TW ALL AC+ G+ ++ + A+ ++ + ++ Y+LLSN+YA++ WG
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK-QD 685
VS+ R K+ + V+K G+S +EV+ + F G+T HP K+ I+ L++LE +++ ++
Sbjct: 460 KVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRN 519
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+V T +LHD+ E+EKE +L +HSE+ AVAYG+L G PIR++KNLRVC DCH +
Sbjct: 520 GYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVL 579
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KHIS+I R II+RD R+HHF GG CSC D+W
Sbjct: 580 KHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 188/384 (48%), Gaps = 22/384 (5%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA-----RRIFDRML 181
N +++ Y + + S A +F+ MP RD ++W ++L+ Q + L
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 182 EKNEISWNGLLAAYVQNGRIEEA----CMLFESK-ANWEVVSWNSLMGGFVKQKRLGDAK 236
++ ++ L+ A G I+ C S+ AN EVV +SL+ + K L AK
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAK 160
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+FD + V++ +SW M++GYA++ EA LF PVK++++WTA++SG+VQ+GK E
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA-----RELFEAMTCKNVASW----NTMI 347
A +F M + + ++ + ++A R++ + S N +I
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA+ ++ A+++F RM D +SW ++I G AQ G +E +L L+ +M +G + N
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
F ++ C+++ +E G++L + K G LL + + G ++EA +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 467 I-VDKDVISWNTMIAGYARHGFGK 489
+ D +W +++ R G G+
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQ 424
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 166/388 (42%), Gaps = 90/388 (23%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG----------------------- 132
N +++ Y G A QVFD+MP RD ++W +++
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 133 ----YVRNKSLSAARNLFEMMPKRDV-------------VSWNTMLSGYAQNGYADAARR 175
+V + + A NL + R V V ++++ YA+ G ++A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+FD + KN ISW +++ Y ++GR EEA LF + SW +L+ GFV+ + +A
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 236 KWIF-----DRMPVRDEVSW-----------------------------------NTMIT 255
+F +R+ + D + N +I
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVS 311
YA+ + + A+ +F +DV +WT+++ G Q+G+ ++A ++D M + N V+
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRM 366
+ +I ++ RELF++MT ++ + ++ +SG + A NL M
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 367 P-QHDCISWAAIIAGYAQSGYSEDSLRL 393
P D +WAA+++ + G + +R+
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRI 429
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W ++ + ++G + AL +F +P ++ S+ A+ISG++ +G+ A VF +M +R+
Sbjct: 174 WTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM-RRER 232
Query: 124 VSW-----------------------------------------NVMISGYVRNKSLSAA 142
V N +I Y + + AA
Sbjct: 233 VDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAA 292
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQN 198
+++F M RDVVSW +++ G AQ+G A+ A ++D M ++ NE+++ GL+ A
Sbjct: 293 KDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHV 352
Query: 199 GRIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNT 252
G +E+ LF+S + + L+ + L +A+ + MP DE +W
Sbjct: 353 GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAA 412
Query: 253 MITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQN---GKVDEAR 298
+++ + + A L +KD T+ + + Y GKV EAR
Sbjct: 413 LLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 465
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L CA +L K LH +VK+G C + N L+ +Y KCG+ A F+E+ +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 473 ISWNTMIAGYARHGF-GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE--- 528
I+W +++ + GK + + G++PDD ++ AC++ G ++ G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 529 -YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+ S + V+ +S +VD+ + G L+ A+ + ++ + + +W A++
Sbjct: 130 HFIVSEYANDEVVKSS-----LVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG--- 180
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
Y K+ E+A E+ + +N + L + + SG+ + V +MR
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 266/810 (32%), Positives = 425/810 (52%), Gaps = 96/810 (11%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN---GQLDPA------RQV 114
WN I +NG AL + + R S VS + ++ G D +Q+
Sbjct: 74 WNSIIRAFSKNGWFPKALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQI 132
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+ + DL N ++ Y R LS AR +F+ MP RD+VSWN+++SGY+ +GY + A
Sbjct: 133 LEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 175 RIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSLMGGF 226
I+ + + + + + +L A+ +++ L +S N V N L+ +
Sbjct: 193 EIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMY 252
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---DVFTWTA 283
+K R DA+ +FD M VRD V++NTMI GY + + E+ ++F E + D+ T T+
Sbjct: 253 LKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILTVTS 312
Query: 284 -----------------------------------MVSGYVQNGKVDEARMIFDAMPEKN 308
++ Y + G + AR +F++M K+
Sbjct: 313 VLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCK------------------------------ 338
TVSWN++I+GY+Q+ + A +LF+ M
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHS 432
Query: 339 ---------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+++ N +I YA+ GE+ + +F+ M D ++W +I+ + G
Sbjct: 433 NGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFAT 492
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
L++ +M++ + + F L CA+LA+ LGK++H L++ G+E+ +GNAL+
Sbjct: 493 GLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCG +E ++ FE + +DV++W MI Y +G G+ AL F M+ GI PD +
Sbjct: 553 MYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVV 612
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ ++ ACSH+GLVEKG F M Y + P +HY C+VDLL R+ ++ +A+ ++ M
Sbjct: 613 FIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
P EPDA+ W ++L ACR G E AE+ + I E+ P++ G +L SN YAA +W VS
Sbjct: 673 PIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVS 732
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
+R +RD+ +KK GYSW+E+ KVH F GD P+ + I+ LE L + ++G++
Sbjct: 733 LIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIP 792
Query: 690 STKLVLHDV-GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
++ V ++ EEEK ++ HSE+LA+A+G+L+ G P++VMKNLRVC DCH K I
Sbjct: 793 DSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLI 852
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKIVGR I++RD NRFH F G CSC D W
Sbjct: 853 SKIVGREILVRDANRFHLFKDGICSCKDRW 882
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/585 (23%), Positives = 264/585 (45%), Gaps = 99/585 (16%)
Query: 129 MISGYVRNKSLSAARNLFEMM-PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK---- 183
+I Y ++ +++ ++F + P ++V WN+++ +++NG+ A + ++ E
Sbjct: 45 LIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSP 104
Query: 184 NEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
++ ++ ++ A E +++ E ++ N+L+ + + L A+ +F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVF 164
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA----PVKDVFTWTAMVSGY------- 288
D MPVRD VSWN++I+GY+ + Y EA ++ E V D FT ++++ +
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVK 224
Query: 289 -------------------VQNG---------KVDEARMIFDAMPEKNTVSWNAMIAGYV 320
V NG + +AR +FD M +++V++N MI GY+
Sbjct: 225 QGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYL 284
Query: 321 QTKRMDMARELF---------EAMTCKNVASW---------------------------- 343
+ + ++ + ++F + +T +V
Sbjct: 285 KLEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTV 344
Query: 344 -NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N +I YA+ G++ AR++F+ M D +SW +II+GY QSG ++++LF M E
Sbjct: 345 KNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ + + ++S LA L+ GK LH +K G V NAL+ MY KCG V ++
Sbjct: 405 QADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F + D ++WNT+I+ R G L + M+ + PD T + L C+
Sbjct: 465 IFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAA 524
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
G E + R +G + ++++ + G L+ + + + M D TW ++
Sbjct: 525 KRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLESSFRVFERMS-RRDVVTWTGMI 582
Query: 583 GACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLSNLYAAS 622
A +YG+ EKA E +ME P++ V ++ +YA S
Sbjct: 583 YAYGMYGE---GEKALESFVDMEKSGIVPDSV---VFIALIYACS 621
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 150/285 (52%), Gaps = 6/285 (2%)
Query: 346 MITGYAQSGEITHARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+I Y+ + ++F R+ P + W +II ++++G+ +L + +++
Sbjct: 45 LIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSP 104
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
++ F SV+ CA L E+G ++ Q++++GFE+ +VGNAL+ MY + G + A F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVF 164
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+E+ +D++SWN++I+GY+ HG+ ++AL ++ ++ I PD T+ +L A ++ +V+
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVK 224
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + + GV S ++ + + R +A+ + M D+ T+ ++
Sbjct: 225 QG-QGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVR-DSVTYNTMICG 282
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
Y K E+ E++ ++ E + + ++++ A G D+S
Sbjct: 283 ---YLKLEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRDLS 324
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/702 (34%), Positives = 403/702 (57%), Gaps = 57/702 (8%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
++S Y G L R+VFD M ++++ WN M+S Y + + LF++M ++ +
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI--- 58
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----KAN 213
+ +++A +FD++ +++ ISWN +++ YV NG E +++ +
Sbjct: 59 --------EGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 110
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWI--------FDRMPVRDEVSWNTMITGYAQNNYLAE 265
++ + S++ G K L K + F+R R S NT++ Y++ L
Sbjct: 111 VDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFER---RINFS-NTLLDMYSKCGDLDG 166
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
A R+FE+ ++V +WT+M++GY ++G D A ++ M ++ + V+ +++ +
Sbjct: 167 ALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACAR 226
Query: 322 TKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ +D +++ + + N+AS N ++ YA+ G + A ++F M D ISW +
Sbjct: 227 SGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM 286
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+ E+K + +L CA+L++LE GK++HG +++ G+
Sbjct: 287 VG----------------ELKP-----DSRTMACILPACASLSALERGKEIHGYILRNGY 325
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ V NAL+ +Y KCG + A F+ I KD++SW MIAGY HG+G +A+ F
Sbjct: 326 SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNE 385
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ GI+PD+++ + IL ACSH+GL+E+G +FY M D+ + P +HY CMVDLL R G
Sbjct: 386 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 445
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
L +A ++ +P PDA WGALL CR+Y ELAEK AE +FE+EPEN G YVLL+N
Sbjct: 446 NLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLAN 505
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG-DTLHPEKDRIYAYLE 676
+YA + +W +V ++R K+ +G++K G SW+E++ +V+ F G ++ HP +I + L+
Sbjct: 506 IYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLK 565
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
++ K+K++G+ TK L + E +KE L HSEKLA+A+G+L++P + IRV KNLR
Sbjct: 566 KMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 625
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC DCH K +SK R I+LRD+NRFHHF G CSC +W
Sbjct: 626 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 165/360 (45%), Gaps = 40/360 (11%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGY 133
+SA +F+ + R +S+N+MISGY+ NG + ++ QM DL + ++ G
Sbjct: 64 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 123
Query: 134 VRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
++ +LS + + + K R + NT+L Y++ G D A R+F++M E+N +SW
Sbjct: 124 AKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 183
Query: 190 GLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A Y ++G + A +L + +VV+ S++ + L + K + D +
Sbjct: 184 SMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 243
Query: 246 DEVS----WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS--------------- 286
+ S N ++ YA+ + A +F VKD+ +W MV
Sbjct: 244 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPA 303
Query: 287 ----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
++ GK ++ + V+ NA++ YV+ + +AR LF+ + K++ S
Sbjct: 304 CASLSALERGKEIHGYILRNGYSSDRHVA-NALVDLYVKCGVLGLARLLFDMIPSKDLVS 362
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
W MI GY G A F+ M + D +S+ +I+ + SG E R F MK
Sbjct: 363 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 422
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 154/339 (45%), Gaps = 41/339 (12%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
+L + +S RR + S N ++ Y G LD A +VF++M +R++VSW MI+GY R+
Sbjct: 137 SLAIKSSFERRINFS-NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWS 195
Query: 140 SAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGL 191
A L + M K DVV+ ++L A++G D + + D + + N N L
Sbjct: 196 DGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNAL 255
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR--------------LGDAK- 236
+ Y + G +E A +F + +++SWN+++G R L K
Sbjct: 256 MDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKE 315
Query: 237 ---WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
+I D N ++ Y + L A+ LF+ P KD+ +WT M++GY +G
Sbjct: 316 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 375
Query: 294 VDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-------VAS 342
+EA F DA E + VS+ +++ + ++ F M KN +
Sbjct: 376 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM--KNDFNIEPKLEH 433
Query: 343 WNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ M+ +++G ++ A + +P D W A++ G
Sbjct: 434 YACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 72/313 (23%)
Query: 66 VAITTHM----RNGCCDSALHVFNSMPRRSSVS----YNAMISGYLLNGQLDPARQVFDQ 117
VAIT+ + R+G D+ V + + + S NA++ Y G ++ A VF
Sbjct: 215 VAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 274
Query: 118 MPQRDLVSWNVMISG--------------------------------------------- 132
M +D++SWN M+
Sbjct: 275 MVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANA 334
Query: 133 ----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKN 184
YV+ L AR LF+M+P +D+VSW M++GY +GY + A F+ M +E +
Sbjct: 335 LVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPD 394
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIF 239
E+S+ +L A +G +E+ F N ++ + ++ + L A
Sbjct: 395 EVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFI 454
Query: 240 DRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
+ +P+ D W ++ G + LAE A+R+FE P ++ + + + Y + K
Sbjct: 455 ETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEP-ENTGYYVLLANIYAEAEKW 513
Query: 295 DEARMIFDAMPEK 307
+E + + + + +K
Sbjct: 514 EEVKRMREKIGKK 526
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 132/317 (41%), Gaps = 44/317 (13%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPAR 112
G+ ++ W I + R+G D A+ + M + V+ +++ +G LD +
Sbjct: 175 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 234
Query: 113 QVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM-------- 160
V D + ++ S N ++ Y + S+ A ++F M +D++SWNTM
Sbjct: 235 DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDS 294
Query: 161 ------LSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFES 210
L A + + I +L S N L+ YV+ G + A +LF+
Sbjct: 295 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 354
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNNYLA 264
+ ++VSW ++ G+ +A F+ M P DEVS+ +++ + + L
Sbjct: 355 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP--DEVSFISILYACSHSGLLE 412
Query: 265 EAQRLFEEAPVKDVFT-------WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMI 316
+ R F +K+ F + MV + G + +A + +P + W A++
Sbjct: 413 QGWRFF--YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470
Query: 317 AGYVQTKRMDMARELFE 333
G +++A ++ E
Sbjct: 471 CGCRIYHDIELAEKVAE 487
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 261/742 (35%), Positives = 405/742 (54%), Gaps = 52/742 (7%)
Query: 60 DIRQWNVAITTHMRNG----CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN ++ ++ G D + + NS +++ M+S L+ +Q+
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 116 DQMPQRDL---VS-WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + L VS N +I+ YV+ S+S AR +F M + D+VSWNTM+SG A +G +
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
+ +F +L GLL + AC +SL GG +
Sbjct: 990 CSVGMFVDLLR------GGLLPDQFTVASVLRAC--------------SSLGGGCHLATQ 1029
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
+ V D T+I Y+++ + EA+ LF D+ +W AM+ GY+ +
Sbjct: 1030 IHACA--MKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVS 1087
Query: 292 GKVDEARMIFDAMPEK----------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
G +A ++ M E N + G Q K++ +A+ K
Sbjct: 1088 GDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQI-------QAVVVKRGF 1140
Query: 342 SWNTMITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+ + + Y + GE+ AR +F+ +P D ++W +I+G ++G E +L +
Sbjct: 1141 NLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHH 1200
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ + + F +++ C+ L +LE G+Q+H VK+ FV +L+ MY KCG+
Sbjct: 1201 MRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGN 1260
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+E+A F+ + SWN MI G A+HG ++AL FE MK+ G+ PD +T +G+LSA
Sbjct: 1261 IEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSA 1320
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH+GLV + E FYSM + YG+ P +HY+C+VD L RAGR+ EA+ ++ +MPFE A+
Sbjct: 1321 CSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASAS 1380
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+ LL ACR+ E ++ AE + +EP ++ YVLLSN+YAA+ +W +V+ R MR
Sbjct: 1381 MYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMR 1440
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
VKK G+SW++++NKVH F GD H E D IY +E + +++++G++ T L
Sbjct: 1441 KANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALV 1500
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
DV EE+KE L YHSEKLA+AYG++ P +RV+KNLRVC DCHNAIK+ISK+ R +
Sbjct: 1501 DVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREV 1560
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
+LRD NRFHHF G CSCGDYW
Sbjct: 1561 VLRDANRFHHFRSGVCSCGDYW 1582
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 155/561 (27%), Positives = 260/561 (46%), Gaps = 83/561 (14%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD-QMPQRDLVSWNVMISGYVRNKSLS 140
H+ +S+P+ S+ +A+ + L G+ AR + P R L N +I+ Y + SLS
Sbjct: 621 HLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLT--NNLITMYSKCGSLS 678
Query: 141 AARNLFEMMP--KRDVVSWNTMLSGYAQNGYADAARRIFD--RMLEKNEISWNGLLAAYV 196
+AR LF+ P RD+V+WN +LS +A D AR F R+L ++ +S A
Sbjct: 679 SARKLFDTTPDTSRDLVTWNAILSAHA-----DKARDGFHLFRLLRRSFVS-----ATRH 728
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ + C+L S + E SL G VK +G + W+ + G
Sbjct: 729 TLAPVFKMCLLSASPSAAE-----SLHGYAVK---IG--------------LQWDVFVAG 766
Query: 257 -----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------P 305
YA+ + EA+ LF+ ++DV W M+ YV G EA ++F P
Sbjct: 767 ALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRP 826
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+ T+ +A V++K+ + +L K + ++ T + Y + +
Sbjct: 827 DDVTL---CTLARVVKSKQNVLEWQL------KQLKAYGTKLFMYDDDDDGS-------- 869
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
D I+W ++ + Q G + +++ F++M + F +LS A L LELG
Sbjct: 870 ----DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELG 925
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
KQ+HG +V+ G + VGN L+ MY K GSV A F ++ + D++SWNTMI+G A
Sbjct: 926 KQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALS 985
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G + ++ +F + G+ PD T+ +L ACS G ++ GV+ +S
Sbjct: 986 GLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFV 1045
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL----------GACRLY-GKTELA 594
T ++D+ ++G+++EA+ L N D A+W A++ A RLY E
Sbjct: 1046 STTLIDVYSKSGKMEEAEFLFVNQD-GFDLASWNAMMHGYIVSGDFPKALRLYILMQESG 1104
Query: 595 EKAAEVIFEMEPENAGMYVLL 615
E+A ++ + AG V L
Sbjct: 1105 ERANQITLANAAKAAGGLVGL 1125
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/539 (43%), Positives = 344/539 (63%), Gaps = 15/539 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------ 304
+ +I Y++ + ++F+E P K TW++++S + QN A F M
Sbjct: 64 HNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVR 123
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHA 359
P+ + G++ +R D+ + + + K +V ++++ YA+ GEI A
Sbjct: 124 PDDHIYPSATKACGFL--RRSDVGKSV-HCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R+LFD MP+ + +SW+ +I GYAQ ++L LF + +N F+SV+ C++
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
LELGK +HG +K+ F++ FVG+AL+ +Y KCG +E AY F+EI +++ WN+M+
Sbjct: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
A+H + LFE M VG+KP+ I+ + +L ACSH GLVEKG EYF S+ RDYG+
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF-SLMRDYGI 359
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P ++HY +VDLLGRAG+L EA +++K MP P + WGALL CR++ TE+A A+
Sbjct: 360 EPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVAD 419
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
I EM+ ++G++VLLSN YAA+GR+ + +++R +RDRGVKK TG SW+E NKVHTF+
Sbjct: 420 RILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFT 479
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD H + IY LEELE ++++ G+V T VL V EEK +RYHSE+LA+A+G
Sbjct: 480 AGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFG 539
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+++ P GRPIRVMKNLRVC DCH AIK +SK GR++I+RDNNRFH F G CSCGDYW
Sbjct: 540 LITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 157/303 (51%), Gaps = 29/303 (9%)
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
LVS N +I+ Y + + + +F+ PK+ +W++++S +AQN A + F RML
Sbjct: 61 LVSHN-LINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLN 119
Query: 183 K-----NEISWNGLLA-AYVQNGRIEEA--CMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
+ I + A +++ + ++ C+ ++ +V +SL+ + K +GD
Sbjct: 120 DGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGD 179
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMV----- 285
A+ +FD MP R+ VSW+ MI GYAQ + EA LF++A ++DV FT+++++
Sbjct: 180 ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSS 239
Query: 286 SGYVQNGKVDEA---RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
S +++ GK+ +M FD+ ++ +A+I+ Y + ++ A ++F+ + +N+
Sbjct: 240 STFLELGKLIHGLCLKMSFDS----SSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGL 295
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
WN+M+ AQ LF+ M + + IS+ +++ + +G E F M+
Sbjct: 296 WNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMR 355
Query: 399 RYG 401
YG
Sbjct: 356 DYG 358
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 163/376 (43%), Gaps = 65/376 (17%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGY---------------LLNGQLDPARQVFDQMPQR--- 121
+L VF+ P++SS +++++IS + +LN + P ++ +
Sbjct: 79 SLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGF 138
Query: 122 ---------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
D+ + ++ Y + + AR+LF+ MP+R+VVSW+ M
Sbjct: 139 LRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGM 198
Query: 161 LSGYAQNGYADAARRIFDRML----EKNEISWNGLL-----AAYVQNGRIEEACMLFESK 211
+ GYAQ A +F + L + N+ +++ ++ + +++ G++ L K
Sbjct: 199 IYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCL---K 255
Query: 212 ANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
+++ S+ ++L+ + K + A +FD +P R+ WN+M+ AQ+ + L
Sbjct: 256 MSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGL 315
Query: 270 FEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQ 321
FEE + ++ +++ G V++ R F M E T + +++ +
Sbjct: 316 FEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGR 375
Query: 322 TKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA- 379
++ A + + M + S W ++TG + A + DR+ + D S +
Sbjct: 376 AGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLL 435
Query: 380 --GYAQSGYSEDSLRL 393
YA +G E++ R+
Sbjct: 436 SNAYAAAGRYEEAARM 451
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 147/331 (44%), Gaps = 33/331 (9%)
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQ 166
QVFD+ P++ +W+ +IS + +N++ A F M P + T G+ +
Sbjct: 81 QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLR 140
Query: 167 NGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
+D + + ++ + + L+ Y + G I +A LF+ VVSW+ +
Sbjct: 141 R--SDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGM 198
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNYLAEAQRLFEEAPVK-- 276
+ G+ + +A +F + + D + +++++I + + +L E +L +K
Sbjct: 199 IYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFL-ELGKLIHGLCLKMS 257
Query: 277 ---DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
F +A++S Y + G ++ A +FD +P +N WN+M+ Q LFE
Sbjct: 258 FDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFE 317
Query: 334 AM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSG 385
M N S+ +++ + +G + R F M + + +A+++ ++G
Sbjct: 318 EMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAG 377
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
++++ + +M R S + ++L+ C
Sbjct: 378 KLQEAVSVIKQMPM---RPTESVWGALLTGC 405
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
SL G QLH ++K G + V + L+ +Y K + F+E K +W+++I+
Sbjct: 40 SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
+A++ AL F M G++PDD AC + G + + G
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS-VHCLAVKTGYY 158
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+ + +VD+ + G + +A++L MP E + +W + +YG +L
Sbjct: 159 CDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSWSGM-----IYGYAQL 205
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 54/248 (21%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLD---PARQVFD 116
D+ + + + + G A H+F+ MP R+ VS++ MI GY QLD A +F
Sbjct: 160 DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGY---AQLDDGVEALTLFK 216
Query: 117 QMPQRDL--------------------------------VSWN-------VMISGYVRNK 137
Q D+ +S++ +IS Y +
Sbjct: 217 QALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCG 276
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA 193
+ A +F+ +P R++ WN+ML AQ+ + +F+ M ++ N IS+ +L
Sbjct: 277 VIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLY 336
Query: 194 AYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
A G +E+ F ++ E + SL+ + +L +A + +MP+R E
Sbjct: 337 ACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396
Query: 249 SWNTMITG 256
W ++TG
Sbjct: 397 VWGALLTG 404
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/616 (39%), Positives = 367/616 (59%), Gaps = 27/616 (4%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I Y G L+ RQVFD+MPQR++ +WN +++G + L A +LF MP+RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV----QNGRIEEACML 207
+WN+M+SG+AQ+ + A F M ++ NE S+ +L+A N ++ ++
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S +V ++L+ + K + DA+ +FD M R+ VSWN++IT + QN EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 268 RLFE----------EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
+F+ E + V + A +S ++ G+ R++ + + + NA +
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSA-IKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + R+ AR +F++M +NV + +MI+GYA + AR +F +M + + +SW A+
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IAGY Q+G +E++L LF +KR F ++L CA+LA L LG Q H ++K GF
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 438 ------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
E FVGN+L+ MY KCG VEE Y F +++++D +SWN MI G+A++G+G +A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L LF M G KPD ITM+G+LSAC H G VE+G YF SM RD+GV P HYTCMVD
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG L+EA+++++ MP +PD+ WG+LL AC+++ L + AE + E+EP N+G
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 597
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVLLSN+YA G+W DV VR MR GV K G SW+++Q H F V D HP K +I
Sbjct: 598 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQI 657
Query: 672 YAYLEEL--EFKLKQD 685
++ L+ L E + +QD
Sbjct: 658 HSLLDILIAEMRPEQD 673
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/599 (24%), Positives = 252/599 (42%), Gaps = 130/599 (21%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + G + VF+ MP+R+ ++N++++G G LD A +F MP+RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSG----------------- 163
+WN M+SG+ ++ A F MM K V S+ ++LS
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 164 ------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
Y++ G + A+R+FD M ++N +SWN L+ + QNG EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 206 ----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE-----VSWNTMITG 256
M+ ES+ + V+ S++ + + + R+ D+ + N +
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ + + EA+ +F+ P+++V T+M+SGY AR++F M E+N VSWNA+I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 317 AGYVQTKRMDMARELFEAM-----------------TCKNVASW---------------- 343
AGY Q + A LF + C ++A
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
N++I Y + G + +F +M + DC+SW A+I G+AQ+GY ++L
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF EM GE+ + VLS C + +E G+ + + G A L +
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD-------FGVAPLRDH 531
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
C M+ R GF ++A + E M ++PD +
Sbjct: 532 YTC-----------------------MVDLLGRAGFLEEAKSMIEEMP---MQPDSVIWG 565
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+L+AC + G Y + V P NS Y + ++ G+ ++ N+ K+M
Sbjct: 566 SLLAACKVHRNITLGK---YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 224/473 (47%), Gaps = 68/473 (14%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
E+ N L+ + K L D + +FD+MP R+ +WN+++TG + +L EA LF P
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARE 330
+D TW +MVSG+ Q+ + +EA F M ++ N S+ ++++ M+ +
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 331 LFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ + +V + ++ Y++ G + A+ +FD M + +SW ++I + Q+G
Sbjct: 174 VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP 233
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGN 445
+ ++L +F M + SV+S CA+L+++++G+++HG++VK + N
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 446 ALLVMYCKCGSVEEAYHAFE-------------------------------EIVDKDVIS 474
A + MY KC ++EA F+ ++ +++V+S
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS-----HTGL-----VE 524
WN +IAGY ++G ++AL LF +K + P + IL AC+ H G+ V
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
K F S D + NS ++D+ + G ++E + + M E D +W A++
Sbjct: 414 KHGFKFQSGEEDDIFVGNS-----LIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
Query: 585 CRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAASGRWGDVSKVR 632
+ + +A E+ EM +P++ M +LS A G G V + R
Sbjct: 468 ---FAQNGYGNEALELFREMLESGEKPDHITMIGVLS----ACGHAGFVEEGR 513
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 160/384 (41%), Gaps = 87/384 (22%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----------SSVSYNAMISGYLLNG 106
GD ++ WN IT +NG AL VF M S +S A +S + G
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV-G 272
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
Q R V + + D++ N + Y + + AR +F+ MP R+V++ +M+SGYA
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CML--------------- 207
AAR +F +M E+N +SWN L+A Y QNG EEA C+L
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 392
Query: 208 --------------------------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
F+S ++ NSL+ +VK + + +F +
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEA 297
M RD VSWN MI G+AQN Y EA LF E D T ++S G V+E
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
R F +M V+ L + TC M+ ++G +
Sbjct: 513 RHYFSSMTRDFGVA------------------PLRDHYTC--------MVDLLGRAGFLE 546
Query: 358 HARNLFDRMP-QHDCISWAAIIAG 380
A+++ + MP Q D + W +++A
Sbjct: 547 EAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 36/299 (12%)
Query: 46 NSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN 105
N K RN DI N + + + A +F+SMP R+ ++ +MISGY +
Sbjct: 282 NDKLRN--------DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTML 161
AR +F +M +R++VSWN +I+GY +N A +LF ++ + V S+ +L
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 162 SGYAQNGYADAARRIFDRML----------EKNEISWNGLLAAYVQNGRIEEACMLFESK 211
A + +L E + N L+ YV+ G +EE ++F
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN-TMI--------TGYAQN-- 260
+ VSWN+++ GF + +A +F M E + TMI G+ +
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG 318
+Y + R F AP++D +T MV + G ++EA+ + + MP + ++V W +++A
Sbjct: 514 HYFSSMTRDFGVAPLRD--HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 113/247 (45%), Gaps = 38/247 (15%)
Query: 405 NRSPFTSVLSTC--ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE---- 458
+ SPF +L +C + L+++ + + +H ++K GF F+ N L+ Y KCGS+E
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 459 ---------------------------EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
EA F + ++D +WN+M++G+A+H ++A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L F M G ++ + +LSACS + KG + +S+ + + + +VD
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ-VHSLIAKSPFLSDVYIGSALVD 195
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE--MEPENA 609
+ + G +++AQ + M + + +W +L+ G A +++ E +EP+
Sbjct: 196 MYSKCGNVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 610 GMYVLLS 616
+ ++S
Sbjct: 255 TLASVIS 261
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/658 (36%), Positives = 380/658 (57%), Gaps = 17/658 (2%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y +G+L AR+VFD+MP +L + N ++S ++ + LF MP+RD V
Sbjct: 52 NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEI-------SWNGLLAAYVQNGRIEEA--CM 206
S+N +++G++ G + +++ +L + + S ++A+ + + + + C
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ + L+ + K + DA+ +F M + V +NT+ITG + + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQT 322
+ LF+ +D TWT MV+G QNG EA +F M + + ++ +++
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291
Query: 323 KRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
++ +++ +T NV + ++ Y++ I A +F RM + ISW A+I
Sbjct: 292 AALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMI 351
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
GY Q+ SE+++R F EM+ G + + SV+S+CANLASLE G Q H + G
Sbjct: 352 VGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 411
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
V NAL+ +Y KCGS+E+A+ F+E+ D +SW ++ GYA+ G K+ + LFE M
Sbjct: 412 RYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+KPD +T +G+LSACS GLVEKG +YF SM +D+G++P HYTCM+DL R+GR
Sbjct: 472 LANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGR 531
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
EA+ +K MP PDA W LL +CRL G E+ + AAE + E +P+N YVLL ++
Sbjct: 532 FKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSM 591
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
+AA G+W +V+ +R MRDR VKK G SW++ +NKVH FS D HP RIY LE L
Sbjct: 592 HAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWL 651
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
K+ ++G+ VLHDV + +K HM+ +HSEKLA+A+G++ +P PIR++KNLR
Sbjct: 652 NSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLR 709
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 162/369 (43%), Gaps = 68/369 (18%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ F +AP F +++ Y ++G++ AR +FD MP+ N + NA+++ ++ +
Sbjct: 40 KTFLQAP--PTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPD 97
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
LF +M ++ S+N +ITG++ +G + L+ + + + +
Sbjct: 98 MERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV--------------- 142
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
R R ++++ + L+ LG +H Q++++GF A FVG+ L
Sbjct: 143 ---------------RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPL 187
Query: 448 LVMYCKCGSVEEAYHAFEE-------------------------------IVDKDVISWN 476
+ MY K G + +A F+E +VD+D I+W
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWT 247
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
TM+ G ++G +AL +F M+ G+ D T IL+AC +E+G + + R
Sbjct: 248 TMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRT 307
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+ N + +VD+ + + A+ + + M + +W A++ YG+ +E+
Sbjct: 308 W-YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVG---YGQNACSEE 362
Query: 597 AAEVIFEME 605
A EM+
Sbjct: 363 AVRAFSEMQ 371
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 41/347 (11%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ + + G A VF M ++ V YN +I+G L ++ A+ +F M RD ++W
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWT 247
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
M++G +N A ++F M V G Q + ++
Sbjct: 248 TMVTGLTQNGLQLEALDVFRRMRAEGV--------GIDQYTFGSI-------------LT 286
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
G LAA + +I + ++ +E V ++L+ + K + + A+ +F RM R
Sbjct: 287 ACGALAALEEGKQIHA----YITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARM-- 299
+ +SW MI GY QN EA R F E + D FT +++S ++E
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 300 ---IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
+ + TVS NA++ Y + ++ A LF+ M+ + SW ++TGYAQ G+
Sbjct: 403 CLALVSGLMRYITVS-NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA 461
Query: 357 THARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+LF++M + D +++ +++ +++G E F M++
Sbjct: 462 KETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK 508
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 155/359 (43%), Gaps = 33/359 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-----GQLDPAR 112
D D W +T +NG AL VF M R V + G +L L+ +
Sbjct: 240 DRDSITWTTMVTGLTQNGLQLEALDVFRRM-RAEGVGIDQYTFGSILTACGALAALEEGK 298
Query: 113 QVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+ + + ++ + ++ Y + +S+ A +F M R+++SW M+ GY QN
Sbjct: 299 QIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNA 358
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWN 220
++ A R F M ++ ++ + ++++ +EE C+ S + N
Sbjct: 359 CSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSN 418
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---- 276
+L+ + K + DA +FD M D+VSW ++TGYAQ E LFE+
Sbjct: 419 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKP 478
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMAREL 331
D T+ ++S + G V++ FD+M + + + + MI Y ++ R A E
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 332 FEAMT-CKNVASWNTMITGYAQSGEIT----HARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ M + W T+++ G + A NL + PQ+ S+ + + +A G
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPA-SYVLLCSMHAAKG 596
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 409 FTSVLSTCAN---LASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAF 464
+ ++LS+ A + + +H ++K +A F+ N LL Y K G + A F
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+E+ D ++ + N +++ A D LF SM + D ++ +++ S TG
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMP----ERDAVSYNALITGFSSTGSPA 127
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMV----DLLGRA-GRLDEAQNLMKNMPFEPDAATWG 579
+ + + ++ R+ V P + M+ L RA G Q L + F A
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVL--RLGFGAYAFVGS 185
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
L+ +Y K L A V EME + MY
Sbjct: 186 PLVD---MYAKMGLIRDARRVFQEMEAKTVVMY 215
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/740 (34%), Positives = 403/740 (54%), Gaps = 57/740 (7%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLV----SWNVMISGYVRNKSLSAARNL----F 146
YN +I GY G D A ++ QM +V ++ ++S + +LS +
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM 206
+M + D+ N+++ YA+ G D R++FD MLE+N +SW L+ Y +EA
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217
Query: 207 LF---------------------------------------ESKANWEVVSWNSLMGGFV 227
LF E + N+L+ ++
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYM 277
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTA 283
K + A+ IFD ++ V +NT+++ Y + + ++ + +E P D T +
Sbjct: 278 KCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLS 337
Query: 284 MVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
++ G + GK A ++ + + + +S NA+I Y++ + + A ++FE M K
Sbjct: 338 TIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS-NAIIDMYMKCGKREAACKVFEHMPNK 396
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
V +WN++I G + G++ A +FD M + D +SW +I Q E+++ LF EM+
Sbjct: 397 TVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQ 456
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G +R + S C L +L+L K + + K +G AL+ M+ +CG
Sbjct: 457 NQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPS 516
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A H F+ + +DV +W I A G + A+ LF M +KPDD+ V +L+ACS
Sbjct: 517 SAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACS 576
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H G V++G + F+SM + +G+ P+ HY CMVDLLGRAG L+EA +L+++MP EP+ W
Sbjct: 577 HGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVW 636
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
G+LL ACR + ELA AAE + ++ PE G++VLLSN+YA++G+W DV++VRL+M+++
Sbjct: 637 GSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEK 696
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
GV+KV G S +EVQ +H F+ GD H E I LEE+ +L + G+V T VL DV
Sbjct: 697 GVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDV 756
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
E+EKEH+L HSEKLA+AYG+++ G PIRV+KNLR+C DCH+ K +SK+ R I +
Sbjct: 757 DEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITV 816
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RDNNR+H F G CSC DYW
Sbjct: 817 RDNNRYHFFKEGFCSCRDYW 836
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 172/352 (48%), Gaps = 32/352 (9%)
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNT-------------VS 311
++ + +F + ++ GY G D+A +++ M P+K T +S
Sbjct: 88 DDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALS 147
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+ G V +M + ++F + N++I YA+ G++ R LFD M + +
Sbjct: 148 EGVQVHGAVL--KMGLEGDIFVS---------NSLIHFYAECGKVDLGRKLFDGMLERNV 196
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+SW ++I GY+ S++++ LF +M G N V+S CA L LELGK++
Sbjct: 197 VSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSY 256
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+ ++G E + NAL+ MY KCG + A F+E +K+++ +NT+++ Y H + D
Sbjct: 257 ISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDV 316
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L++ + M G +PD +TM+ ++AC+ G + G + R+ G+ ++D
Sbjct: 317 LVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRN-GLEGWDNISNAIID 375
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+ + G+ + A + ++MP TW +L+ G ELA + + + E
Sbjct: 376 MYMKCGKREAACKVFEHMP-NKTVVTWNSLIAGLVRDGDMELAWRIFDEMLE 426
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 198/439 (45%), Gaps = 72/439 (16%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM- 149
S++ NA++ Y+ G + ARQ+FD+ ++LV +N ++S YV ++ S + + M
Sbjct: 265 STIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEML 324
Query: 150 ---PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----NGLLAAYVQNGRIE 202
P+ D V+ + ++ AQ G + +L W N ++ Y++ G+ E
Sbjct: 325 QKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKRE 384
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
AC +FE N VV+WNSL+ G V+ + A IFD M RD VSWNTMI Q +
Sbjct: 385 AACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSM 444
Query: 263 LAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
EA LF E + D T + S G +D A+ + + EKN + + +
Sbjct: 445 FEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYI-EKNDIHVDLQLG- 502
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
T +DM +++ G+ + A ++F RM + D +W A I
Sbjct: 503 ---TALVDM----------------------FSRCGDPSSAMHVFKRMEKRDVSAWTAAI 537
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
A G +E ++ LF EM + + F ++L+ C++ S++ G+QL
Sbjct: 538 GVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLF--------- 588
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
S+E+A+ + ++ + M+ R G ++A+ L +SM
Sbjct: 589 ----------------WSMEKAHG-----IRPHIVHYGCMVDLLGRAGLLEEAVDLIQSM 627
Query: 499 KTVGIKPDDITMVGILSAC 517
I+P+D+ +L+AC
Sbjct: 628 P---IEPNDVVWGSLLAAC 643
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 141/274 (51%), Gaps = 12/274 (4%)
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELF-----EAMTCKNVAS-WNTMITGYAQSG-- 354
++ E N ++ N+ V K + ++L + + C AS N +I Q G
Sbjct: 16 SLKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTL 75
Query: 355 -EITHARNLF--DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ +ARN F D + +I GYA +G + ++ L+++M G ++ F
Sbjct: 76 ESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPF 135
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+LS C+ + +L G Q+HG ++K+G E FV N+L+ Y +CG V+ F+ +++++
Sbjct: 136 LLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERN 195
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
V+SW ++I GY+ K+A+ LF M G++P+ +TMV ++SAC+ +E G +
Sbjct: 196 VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKK-VC 254
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
S + G+ ++ +VD+ + G + A+ +
Sbjct: 255 SYISELGMELSTIMVNALVDMYMKCGDICAARQI 288
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 161/373 (43%), Gaps = 57/373 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQ 120
N + +M+ G +A +F+ ++ V YN ++S Y+ + + D+M P+
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329
Query: 121 RDLVS-------------------------------W----NVMISGYVRNKSLSAARNL 145
D V+ W N +I Y++ AA +
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKV 389
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
FE MP + VV+WN++++G ++G + A RIFD MLE++ +SWN ++ A VQ EEA
Sbjct: 390 FEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAI 449
Query: 206 MLFESKANWEVVSWNSLMGGFVKQ----KRLGDAKWI---FDRMPVRDEVSWNT-MITGY 257
LF N + M G L AKW+ ++ + ++ T ++ +
Sbjct: 450 ELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMF 509
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWN 313
++ + A +F+ +DV WTA + G + A +F+ M E+ + V +
Sbjct: 510 SRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFV 569
Query: 314 AMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMP- 367
A++ +D R+LF +M ++ + M+ ++G + A +L MP
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPI 629
Query: 368 QHDCISWAAIIAG 380
+ + + W +++A
Sbjct: 630 EPNDVVWGSLLAA 642
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 137/291 (47%), Gaps = 20/291 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I +M+ G ++A VF MP ++ V++N++I+G + +G ++ A ++FD+M +RDLV
Sbjct: 371 NAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLV 430
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN----GYADAARRIFDRM 180
SWN MI V+ A LF M + + + G A G D A+ +
Sbjct: 431 SWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVC-TY 489
Query: 181 LEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+EKN+I + L+ + + G A +F+ +V +W + +G + A
Sbjct: 490 IEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGA 549
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVS 286
+F+ M + D+V + ++T + + + ++LF + + MV
Sbjct: 550 IELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVD 609
Query: 287 GYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ G ++EA + +MP E N V W +++A + K +++A E +T
Sbjct: 610 LLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLT 660
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 111/267 (41%), Gaps = 53/267 (19%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ WN I +R+G + A +F+ M R VS+N MI + + A ++F +M
Sbjct: 398 VVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQN 457
Query: 121 R----------------------DLVSW-----------------NVMISGYVRNKSLSA 141
+ DL W ++ + R S+
Sbjct: 458 QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSS 517
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQ 197
A ++F+ M KRDV +W + A G + A +F+ MLE+ +++ + LL A
Sbjct: 518 AMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSH 577
Query: 198 NGRIEEACMLFES--KANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWN 251
G +++ LF S KA+ +V + ++ + L +A + MP+ ++V W
Sbjct: 578 GGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWG 637
Query: 252 TMITGYA--QNNYLAE--AQRLFEEAP 274
+++ +N LA A++L + AP
Sbjct: 638 SLLAACRKHKNVELAHYAAEKLTQLAP 664
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/553 (41%), Positives = 336/553 (60%), Gaps = 12/553 (2%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFTWTAMVSGYVQN 291
+F ++ + W MI GYA L+E+ + PV F+ G N
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
Query: 292 ---GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
GK A+ I + N+MI YV+ + AR++F+ M+ ++V SW +I
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
YA+ G++ A LFD +P D ++W A++ GYAQ+G +++L F +M+ G +
Sbjct: 218 AYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVT 277
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGF--EAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
V+S CA L +++ + + GF VG+AL+ MY KCGS +EAY FE
Sbjct: 278 LAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEV 337
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ +++V S+++MI GYA HG AL LF M I+P+ +T +GILSACSH GLVE+G
Sbjct: 338 MKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQG 397
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ F M + +GV P+ HY CMVDLLGRAG L+EA +L+K MP EP+ WGALLGACR
Sbjct: 398 RQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACR 457
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++G ++A+ AA +F++EP G Y+LLSN+YA++GRW +VSK+R +R++G KK G
Sbjct: 458 IHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGC 517
Query: 647 SWLEVQN-KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
SW E +N ++H F GDT HP I L++L +L+ G+ + +D+ ++EKE
Sbjct: 518 SWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKER 577
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
+L HSEKLA+AYG+L AG I++MKN+R+CEDCHN + S+I GR II+RDN RFH
Sbjct: 578 ILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFH 637
Query: 766 HFSGGSCSCGDYW 778
HF G+CSCG++W
Sbjct: 638 HFHNGTCSCGNFW 650
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 188/431 (43%), Gaps = 56/431 (12%)
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAY-----VQNGRIEEACML 207
W M+ GYA G + + RM +++ L A + G+ A +
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
++ NS++ +VK LG A+ +FD M RD VSW +I YA+ + A
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQ-- 321
LF++ P KD+ WTAMV+GY QNG+ EA F M E + V+ +I+ Q
Sbjct: 230 GLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289
Query: 322 -TKRMDMARELFEAM---TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
K + R++ E NV + +I Y++ G A +F+ M + + S++++
Sbjct: 290 AVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSM 349
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I GYA G + +L+LF +M + R N+ F +LS C++ +E G+QL ++ K
Sbjct: 350 ILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEK--- 406
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
F G A + C M+ R G ++AL L
Sbjct: 407 ----FFGVAPSPDHYAC-----------------------MVDLLGRAGCLEEALDL--- 436
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS-KHYTCMVDLLGRA 556
+KT+ ++P+ +L AC G + + N + + PN +Y + ++ A
Sbjct: 437 VKTMPMEPNGGVWGALLGACRIHGNPDIAQ---IAANELFKLEPNGIGNYILLSNIYASA 493
Query: 557 GRLDEAQNLMK 567
GR +E L K
Sbjct: 494 GRWEEVSKLRK 504
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 190/410 (46%), Gaps = 38/410 (9%)
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV-----SWNVMIS--GY 133
L VF + + + AMI GY L G L + + +M +RD V +++ + G
Sbjct: 96 LLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRM-RRDGVGPVSFTFSALFKACGA 154
Query: 134 VRNKSLSA---ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
N L A+ + D+ N+M+ Y + G+ AR++FD M E++ +SW
Sbjct: 155 ALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTE 214
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRD 246
L+ AY + G +E A LF+ + ++V+W +++ G+ + R +A F +M D
Sbjct: 215 LIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETD 274
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEA------PVKDVFTWTAMVSGYVQNGKVDEARMI 300
EV+ +I+ AQ + A + + A P +V +A++ Y + G DEA +
Sbjct: 275 EVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKV 334
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEI 356
F+ M E+N S+++MI GY R A +LF M N ++ +++ + +G +
Sbjct: 335 FEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLV 394
Query: 357 THARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
R LF +M + ++ +A ++ ++G E++L L +K N + +
Sbjct: 395 EQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDL---VKTMPMEPNGGVWGA 451
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV--MYCKCGSVEE 459
+L C + ++ + +L K+ +GN +L+ +Y G EE
Sbjct: 452 LLGACRIHGNPDIAQIAANELFKLEPNG---IGNYILLSNIYASAGRWEE 498
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 29/321 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I +++ G A VF+ M R VS+ +I Y G ++ A +FD +P
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNG---YADA 172
+D+V+W M++GY +N A F+ M + D V+ ++S AQ G +A+
Sbjct: 237 SKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 173 ARRIFDRM---LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R I +R N + + L+ Y + G +EA +FE V S++S++ G+
Sbjct: 297 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
Query: 230 KRLGDAKWIFDRM---PVR-DEVSWNTMITGYAQNNYLAEAQRLFEE-------APVKDV 278
R A +F M +R ++V++ +++ + + + ++LF + AP D
Sbjct: 357 GRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPD- 415
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAR----ELFE 333
+ MV + G ++EA + MP E N W A++ D+A+ ELF+
Sbjct: 416 -HYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFK 474
Query: 334 AMTCKNVASWNTMITGYAQSG 354
+ + ++ + YA +G
Sbjct: 475 -LEPNGIGNYILLSNIYASAG 494
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 266/725 (36%), Positives = 389/725 (53%), Gaps = 97/725 (13%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIF----------DRMLEKNEIS----------- 187
MPKR+VVSWN+++SGY Q G+ +F D+ N +S
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 188 ------------------WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
N L+ Y + GRI+ A ++FES + VSWNSL+ G+V+
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYA----QNNYLA--EAQRLFEEAPVK-----DV 278
+ + +M +R ++ N+ G A +N+ + E ++ VK DV
Sbjct: 121 GSNDEMLRLLVKM-LRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM--DMARE---LFE 333
TA++ Y + G +++A IF MP+ N V +NAMIAG++Q + M + A E LF
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239
Query: 334 AM-----------------TCKNVASW----------------------NTMITGYAQSG 354
M C + ++ N ++ Y+ SG
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
I F P+ D +SW ++I G+ Q+G E L LF E+ G + + + +LS
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CANLA+++ G+Q+H +K G + N+ + MY KCG ++ A F+E + D++S
Sbjct: 360 ACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVS 419
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W+ MI+ A+HG K+A+ LFE MK GI P+ IT +G+L ACSH GLVE+G YF M
Sbjct: 420 WSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMK 479
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+D+G+ PN KH C+VDLLGRAGRL EA++ + + FE D W +LL ACR++ T+
Sbjct: 480 KDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTG 539
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
++ AE + E+EPE A YVLL N+Y +G +++R M+DRGVKK G SW+EV N
Sbjct: 540 KRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNV 599
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH-MLRYHSEK 713
VH+F GD HP IY LEE+ ++K+ ++ KLV + K++ M+ YHSEK
Sbjct: 600 VHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHSEK 658
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LAV +GI+S+P P+RVMKNLR C CH +K S++ R IILRD RFH F GSCS
Sbjct: 659 LAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCS 718
Query: 774 CGDYW 778
CGDYW
Sbjct: 719 CGDYW 723
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 190/465 (40%), Gaps = 86/465 (18%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N++I Y G++D AR VF+ + D VSWN +I+GYVR S L M + +
Sbjct: 80 NSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGL- 138
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNE---------------ISWNGLLAAYVQNGR 200
L+ YA A F +E + + LL Y + G
Sbjct: 139 ----NLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGD 194
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD-----AKWIFDRMPVR----DEVSWN 251
+E+A +F+ + VV +N+++ GF++ + + D A ++F M R E +++
Sbjct: 195 LEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFS 254
Query: 252 TMITGYAQNNYLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+++ + + ++F+ D F A+V Y +G +++ F + P+
Sbjct: 255 SILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL 314
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVAS-------- 342
+ VSW ++I G+VQ + + LF + C N+A+
Sbjct: 315 DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIH 374
Query: 343 --------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
N+ I YA+ G+I A F D +SW+ +I+ AQ G ++
Sbjct: 375 AYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAK 434
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCAN-------LASLELGKQLHGQLVKVGFEAGC 441
+++ LF MK G N F VL C++ L E+ K+ HG V A C
Sbjct: 435 EAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSA-C 493
Query: 442 FVGNALLVMYCKCGSVEEA-YHAFEEIVDKDVISWNTMIAGYARH 485
V + + G + EA + + D + W ++++ H
Sbjct: 494 IVD-----LLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 533
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 122/314 (38%), Gaps = 58/314 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL-------------- 103
D D+ + T+ + G + A +F MP + V YNAMI+G+L
Sbjct: 176 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 235
Query: 104 ------LNGQLDPAR------------------------QVFDQMPQRDLVSWNVMISGY 133
+ + P+ Q+F Q D N ++ Y
Sbjct: 236 YLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 295
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWN 189
+ S+ F PK DVVSW +++ G+ QNG + +F +L + +E + +
Sbjct: 296 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 355
Query: 190 GLLA-----AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
+L+ A V++G A + N+ ++ NS + + K + A F
Sbjct: 356 IMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQ-NSQICMYAKCGDIDSANMTFKETKN 414
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
D VSW+ MI+ AQ+ EA LFE + T+ ++ G V+E
Sbjct: 415 PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 474
Query: 301 FDAMPEKNTVSWNA 314
F+ M + + ++ N
Sbjct: 475 FEIMKKDHGITPNV 488
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 59/266 (22%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQ 120
N + + +G + L F+S P+ VS+ ++I G++ NGQ + +F ++ +
Sbjct: 289 NALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRK 348
Query: 121 RDLVSWNVMISG-----------------------------------YVRNKSLSAARNL 145
D + ++M+S Y + + +A
Sbjct: 349 PDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMT 408
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F+ D+VSW+ M+S AQ+G A A +F+ M + N I++ G+L A G +
Sbjct: 409 FKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLV 468
Query: 202 EEACMLFESKANWEVVSWN--------SLMGGFVKQKRLGDAK-WIFDRMPVRDEVSWNT 252
EE FE ++ N L+G + RL +A+ +I D D V W +
Sbjct: 469 EEGLRYFEIMKKDHGITPNVKHSACIVDLLG---RAGRLAEAESFIMDSGFEGDPVMWRS 525
Query: 253 MITG----YAQNNYLAEAQRLFEEAP 274
+++ A + A+R+ E P
Sbjct: 526 LLSACRVHKATDTGKRVAERVIELEP 551
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/615 (37%), Positives = 365/615 (59%), Gaps = 15/615 (2%)
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGGFVKQKRLGDAKW 237
R+L + + +L ++ + R+ EA + + + +N+++ ++++ + + +
Sbjct: 20 RLLSTFPSNSHHVLNIHIHDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQR 79
Query: 238 IFDRMPVRDEVSW----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
+ M + +I Y + + L +A+ +F+ P ++V +WTAM+S Y Q G
Sbjct: 80 VHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGY 139
Query: 294 VDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----VASWNT 345
+A +F M E N ++ ++ + + + R++ + N V ++
Sbjct: 140 ASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSS 199
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ YA+ G+I AR +F +P+ D +S AII+GYAQ G E++L LF ++R G + N
Sbjct: 200 LLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSN 259
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+TSVL+ + LA+L+ GKQ+H L++ + + N+L+ MY KCG++ A F+
Sbjct: 260 YVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFD 319
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVE 524
+ ++ VISWN M+ GY++HG G++ L LF M +KPD +T++ +LS CSH GL +
Sbjct: 320 TLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLED 379
Query: 525 KGTEYFYSMNR-DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
KG + FY M V P+SKHY C+VD+LGRAGR++ A +K MPFEP AA WG LLG
Sbjct: 380 KGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLG 439
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
AC ++ ++ E + ++EPENAG YV+LSNLYA++GRW DV +R M + V K
Sbjct: 440 ACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKE 499
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G SW+E+ +HTF D HP ++ + A ++EL + K+ G+V VLHDV EE+K
Sbjct: 500 PGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQK 559
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E +L HSEKLA+ +G+++ P PIRV+KNLR+C DCHN K+ SKI GR + LRD NR
Sbjct: 560 EKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNR 619
Query: 764 FHHFSGGSCSCGDYW 778
FH GG CSCGDYW
Sbjct: 620 FHRIVGGKCSCGDYW 634
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 182/374 (48%), Gaps = 62/374 (16%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKN 184
+I YV+ SL AR++F++MP+R+VVSW M+S Y+Q GYA A +F +ML E N
Sbjct: 99 LIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPN 158
Query: 185 EISWNGLLAAYVQN-----GRIEEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKW 237
E ++ +L + + + GR + ++ K N+E V +SL+ + K ++ +A+
Sbjct: 159 EFTFATVLTSCIGSSGFVLGRQIHSHII---KLNYEAHVYVGSSLLDMYAKDGKIHEARG 215
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGK 293
IF +P RD VS +I+GYAQ EA LF E + T+T++++
Sbjct: 216 IFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAA 275
Query: 294 VDEARMIFDAMPEKNTVSW----NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+D + + + + S+ N++I Y + + AR +F+ + + V SWN M+ G
Sbjct: 276 LDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVG 335
Query: 350 YAQSGEITHARNLFDRM-----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEM------- 397
Y++ GE LF+ M + D ++ A+++G + G + + +F +M
Sbjct: 336 YSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISV 395
Query: 398 ----KRYG----------------ERLNRSPFT-------SVLSTCANLASLELGKQLHG 430
K YG E + + PF +L C+ ++L++G+ +
Sbjct: 396 QPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGH 455
Query: 431 QLVKVGFE-AGCFV 443
QL+++ E AG +V
Sbjct: 456 QLLQIEPENAGNYV 469
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 146/333 (43%), Gaps = 62/333 (18%)
Query: 77 CDS---ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ------------- 120
CDS A HVF+ MP R+ VS+ AMIS Y G A +F QM +
Sbjct: 106 CDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATV 165
Query: 121 -------------RDLVSWNV-------------MISGYVRNKSLSAARNLFEMMPKRDV 154
R + S + ++ Y ++ + AR +F+ +P+RDV
Sbjct: 166 LTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDV 225
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACM---- 206
VS ++SGYAQ G + A +F R+ ++ N +++ +L A ++
Sbjct: 226 VSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNH 285
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
L S+ VV NSL+ + K L A+ IFD + R +SWN M+ GY+++ E
Sbjct: 286 LLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREV 345
Query: 267 QRLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIF-DAMPEKNTVSWNAMIAGYV 320
LF +E VK D T A++SG G D+ IF D K +V ++ G V
Sbjct: 346 LELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCV 405
Query: 321 -----QTKRMDMARELFEAMTCK-NVASWNTMI 347
+ R++ A E + M + + A W ++
Sbjct: 406 VDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLL 438
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNV 128
++G A +F +P R VS A+ISGY G + A ++F ++ Q + V++
Sbjct: 206 KDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTS 265
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYADAARRIFDRMLEKN 184
+++ +L + + + + +V S+ N+++ Y++ G ARRIFD + E+
Sbjct: 266 VLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERT 325
Query: 185 EISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMGG 225
ISWN +L Y ++G E LF E+K + V+ +++ G
Sbjct: 326 VISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSG 371
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D+ I+ + + G + AL +F + R + V+Y ++++ LD +QV
Sbjct: 224 DVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVH 283
Query: 116 DQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + + ++ S+ N +I Y + +L+ AR +F+ + +R V+SWN ML GY+++G
Sbjct: 284 NHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGR 343
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNG 199
+F+ M+++N++ + + V +G
Sbjct: 344 EVLELFNLMIDENKVKPDSVTVLAVLSG 371
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/635 (38%), Positives = 372/635 (58%), Gaps = 38/635 (5%)
Query: 176 IFDRMLEKNEI-SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ----- 229
+F+R ++K ++ SWN ++A ++G EA + F S + S +K
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 230 -----KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
K+ ++F D + +I Y+ L +A+++F+E P +++ +WT+M
Sbjct: 91 DIFSGKQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 285 VSGYVQNGKV----------------DEARMIFDAMPEKNTVSWNAMIA--GYVQTKRMD 326
+ GY NG D+ M D+M + +S + + G ++
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGE--ITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ + F+ + V+ NT++ YA+ GE + AR +FD++ D +S+ +I++ YAQS
Sbjct: 209 VIKRGFD----RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 385 GYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G S ++ +F + K N ++VL ++ +L +GK +H Q++++G E V
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
G +++ MYCKCG VE A AF+ + +K+V SW MIAGY HG AL LF +M G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ IT V +L+ACSH GL +G +F +M +GV P +HY CMVDLLGRAG L +A
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+L++ M +PD+ W +LL ACR++ ELAE + +FE++ N G Y+LLS++YA +G
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW DV +VR+ M++RG+ K G+S LE+ +VH F +GD HP++++IY +L EL KL
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+V +T V HDV EEEKE LR HSEKLA+A+GI++ G + V+KNLRVC DCHN
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IK ISKIV R ++RD RFHHF G CSCGDYW
Sbjct: 625 VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 40/381 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSS--VSYNAMISGYLLNGQLDPA 111
D+ WN I R+G AL F+SM P RSS + A S + +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA- 170
+Q F Q D+ + +I Y L AR +F+ +PKR++VSW +M+ GY NG A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 171 DAARRIFDRMLEKNE------ISWNGLLAAYVQNGRI-----EEACMLFESKANWE--VV 217
DA D ++++N+ + GL++ R+ E+ F K ++ V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 218 SWNSLMGGFVK--QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
N+L+ + K + + A+ IFD++ +D VS+N++++ YAQ+ EA +F
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 276 KDVFTWTAMV----------SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
V T+ A+ SG ++ GK ++I + E + + ++I Y + R+
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL-EDDVIVGTSIIDMYCKCGRV 338
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGY 381
+ AR+ F+ M KNV SW MI GY G A LF M + + I++ +++A
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 382 AQSGYSEDSLRLFIEMK-RYG 401
+ +G + R F MK R+G
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFG 419
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/737 (34%), Positives = 410/737 (55%), Gaps = 55/737 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
+++ Y+ G + +VF+ MP++++V+W +++G + S LF M +
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML 207
++ ++LS A G D +R+ + ++ + N L+ Y + G +E+A +
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR----MPVRDEVSWNTMITGYAQNNYL 263
F ++VSWN+LM G + +A +F M + ++ T+I A L
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318
Query: 264 AEAQRLFEEAPVKDVF-----TWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIA 317
A A++L +K F TA+ Y + G++ +A IF +N VSW A+I+
Sbjct: 319 ALARQL-HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377
Query: 318 GYVQTKRMDMARELFEAM----TCKNVASWNTMI-------------------------- 347
G +Q + +A LF M N +++ M+
Sbjct: 378 GCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFV 437
Query: 348 -----TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
Y++ G A ++F + Q D ++W+A+++ +AQ+G E + LF +M G
Sbjct: 438 GTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGI 497
Query: 403 RLNRSPFTSVLSTCA-NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ N +SV+ CA A ++ G+Q H +K + V +AL+ MY + G+++ A
Sbjct: 498 KPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
FE D+D++SWN+MI+GYA+HG+ A+ F M+ GI+ D +T + ++ C+H G
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNG 617
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV +G +YF SM RD+ + P +HY CMVDL RAG+LDE +L+++MPF A W L
Sbjct: 618 LVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTL 677
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++ EL + +A+ + +EP ++ YVLLSN+YAA+G+W + +VR M R VK
Sbjct: 678 LGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVK 737
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G SW++++NKVH+F D HP D+IY L+ + +LKQDG+ +T VLHD+ E+
Sbjct: 738 KEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAED 797
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
+KE ML HSE+LA+A+G+++ P G P++++KNLRVC DCH +K +S I R II+RD
Sbjct: 798 QKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDC 857
Query: 762 NRFHHFSGGSCSCGDYW 778
+RFHHF+GG+CSCGD+W
Sbjct: 858 SRFHHFNGGACSCGDFW 874
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 139/586 (23%), Positives = 251/586 (42%), Gaps = 114/586 (19%)
Query: 109 DP--ARQVFDQMPQRDL-VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
DP AR D++P+RD V N ++ Y R + + F + + V+ + LS
Sbjct: 47 DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVL 106
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ A R + DR+L + L V+ G EV + SL+
Sbjct: 107 K-----ACRSVPDRVLGEQ------LHCLCVKCGH-----------DRGEVSAGTSLVDM 144
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTW 281
++K + + +F+ MP ++ V+W +++TG A +E LF E + FT+
Sbjct: 145 YMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTF 204
Query: 282 TAMVSG-----------------------------------YVQNGKVDEARMIFDAMPE 306
+++S Y + G V++A+ +F+ M
Sbjct: 205 ASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMET 264
Query: 307 KNTVSWNAMIAGY-----------------------------------VQTKRMDMAREL 331
++ VSWN ++AG K++ +AR+L
Sbjct: 265 RDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQL 324
Query: 332 FEAMTCKNVASWNTMIT----GYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGY 386
+ ++T Y++ GE+ A N+F + +SW AII+G Q+G
Sbjct: 325 HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD 384
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
++ LF M+ +R+ + FT A+L+ L Q+H Q++K ++ FVG A
Sbjct: 385 IPLAVVLFSRMRE--DRVMPNEFTYSAMLKASLSILP--PQIHAQVIKTNYQHIPFVGTA 440
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
LL Y K GS E+A F+ I KDV++W+ M++ +A+ G + A LF M GIKP+
Sbjct: 441 LLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPN 500
Query: 507 DITMVGILSACS-HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ T+ ++ AC+ + V++G + F++++ Y + +V + R G +D AQ +
Sbjct: 501 EFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIV 559
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
+ + D +W +++ Y + + KA E +ME M
Sbjct: 560 FERQT-DRDLVSWNSMISG---YAQHGYSMKAIETFRQMEASGIQM 601
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 194/462 (41%), Gaps = 110/462 (23%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN------------------- 105
N + + + G + A VFN M R VS+N +++G LN
Sbjct: 240 NSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGK 299
Query: 106 ----------------GQLDPARQVFDQMPQRDL-VSWNVMIS---GYVRNKSLSAARNL 145
QL ARQ+ + + ++ NVM + Y + L+ A N+
Sbjct: 300 MTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNI 359
Query: 146 FEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWN----------- 189
F M R+VVSW ++SG QNG A +F RM E NE +++
Sbjct: 360 FSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP 419
Query: 190 --------------------GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
LLA+Y + G E+A +F+ +VV+W++++ +
Sbjct: 420 PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQA 479
Query: 230 KRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFT 280
A ++F++M ++ +E + +++I A + + R F +K +
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICV 539
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+A+VS Y + G +D A+++F+ +++ VSWN+MI+GY Q A E F M +
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 341 ----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSL 391
++ +I G +G + + FD M + I+ +A ++ Y+++G ++++
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETM 659
Query: 392 RLFIEMKRYGERLNRSPFT-------SVLSTCANLASLELGK 426
L +M PF ++L C ++ELGK
Sbjct: 660 SLIRDM----------PFPAGAMVWRTLLGACRVHKNVELGK 691
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 99/233 (42%), Gaps = 50/233 (21%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVS------------------- 94
D+ W+ ++ H + G C+ A ++FN M P ++S
Sbjct: 465 DVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQF 524
Query: 95 ---------------YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN--- 136
+A++S Y G +D A+ VF++ RDLVSWN MISGY ++
Sbjct: 525 HAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYS 584
Query: 137 -KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNG 190
K++ R + + D V++ ++ G NG ++ FD M+ ++I+ +
Sbjct: 585 MKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYAC 644
Query: 191 LLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
++ Y + G+++E L + W +L+G K + K+ D++
Sbjct: 645 MVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKL 697
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/553 (41%), Positives = 336/553 (60%), Gaps = 12/553 (2%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFTWTAMVSGYVQN 291
+F ++ + W MI GYA L+E+ + PV F+ G N
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
Query: 292 ---GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
GK A+ I + N+MI YV+ + AR++F+ M+ ++V SW +I
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
YA+ G++ A LFD +P D ++W A++ GYAQ+G +++L F +M+ G +
Sbjct: 218 AYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVT 277
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGF--EAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
V+S CA L +++ + + GF VG+AL+ MY KCGS +EAY FE
Sbjct: 278 LAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEV 337
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ +++V S+++MI GYA HG AL LF M I+P+ +T +GILSACSH GLVE+G
Sbjct: 338 MKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQG 397
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ F M + +GV P+ HY CMVDLLGRAG L+EA +L+K MP EP+ WGALLGACR
Sbjct: 398 RQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACR 457
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++G ++A+ AA +F++EP G Y+LLSN+YA++GRW +VSK+R +R++G KK G
Sbjct: 458 IHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGC 517
Query: 647 SWLEVQN-KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
SW E +N ++H F GDT HP I L++L +L+ G+ + +D+ ++EKE
Sbjct: 518 SWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKER 577
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
+L HSEKLA+AYG+L AG I++MKN+R+CEDCHN + S+I GR II+RDN RFH
Sbjct: 578 ILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFH 637
Query: 766 HFSGGSCSCGDYW 778
HF G+CSCG++W
Sbjct: 638 HFHNGTCSCGNFW 650
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 189/431 (43%), Gaps = 56/431 (12%)
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAY-----VQNGRIEEACML 207
W M+ GYA G + + RM +++ L A + G+ A +
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
++ NS++ +VK LG A+ +FD M RD VSW +I YA+ + A
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQ-- 321
LF++ P+KD+ WTAMV+GY QNG+ EA F M E + V+ +I+ Q
Sbjct: 230 GLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289
Query: 322 -TKRMDMARELFEAM---TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
K + R++ E NV + +I Y++ G A +F+ M + + S++++
Sbjct: 290 AVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSM 349
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I GYA G + +L+LF +M + R N+ F +LS C++ +E G+QL ++ K
Sbjct: 350 ILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEK--- 406
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
F G A + C M+ R G ++AL L
Sbjct: 407 ----FFGVAPSPDHYAC-----------------------MVDLLGRAGCLEEALDL--- 436
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS-KHYTCMVDLLGRA 556
+KT+ ++P+ +L AC G + + N + + PN +Y + ++ A
Sbjct: 437 VKTMPMEPNGGVWGALLGACRIHGNPDIAQ---IAANELFKLEPNGIGNYILLSNIYASA 493
Query: 557 GRLDEAQNLMK 567
GR +E L K
Sbjct: 494 GRWEEVSKLRK 504
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 189/410 (46%), Gaps = 38/410 (9%)
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV-----SWNVMIS--GY 133
L VF + + + AMI GY L G L + + +M +RD V +++ + G
Sbjct: 96 LLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRM-RRDGVGPVSFTFSALFKACGA 154
Query: 134 VRNKSLSA---ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
N L A+ + D+ N+M+ Y + G+ AR++FD M E++ +SW
Sbjct: 155 ALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTE 214
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRD 246
L+ AY + G +E A LF+ ++V+W +++ G+ + R +A F +M D
Sbjct: 215 LIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETD 274
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEA------PVKDVFTWTAMVSGYVQNGKVDEARMI 300
EV+ +I+ AQ + A + + A P +V +A++ Y + G DEA +
Sbjct: 275 EVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKV 334
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEI 356
F+ M E+N S+++MI GY R A +LF M N ++ +++ + +G +
Sbjct: 335 FEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLV 394
Query: 357 THARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
R LF +M + ++ +A ++ ++G E++L L +K N + +
Sbjct: 395 EQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDL---VKTMPMEPNGGVWGA 451
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV--MYCKCGSVEE 459
+L C + ++ + +L K+ +GN +L+ +Y G EE
Sbjct: 452 LLGACRIHGNPDIAQIAANELFKLEPNG---IGNYILLSNIYASAGRWEE 498
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 29/321 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I +++ G A VF+ M R VS+ +I Y G ++ A +FD +P
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNG---YADA 172
+D+V+W M++GY +N A F+ M + D V+ ++S AQ G +A+
Sbjct: 237 LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 173 ARRIFDRM---LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R I +R N + + L+ Y + G +EA +FE V S++S++ G+
Sbjct: 297 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
Query: 230 KRLGDAKWIFDRM---PVR-DEVSWNTMITGYAQNNYLAEAQRLFEE-------APVKDV 278
R A +F M +R ++V++ +++ + + + ++LF + AP D
Sbjct: 357 GRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPD- 415
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAR----ELFE 333
+ MV + G ++EA + MP E N W A++ D+A+ ELF+
Sbjct: 416 -HYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFK 474
Query: 334 AMTCKNVASWNTMITGYAQSG 354
+ + ++ + YA +G
Sbjct: 475 -LEPNGIGNYILLSNIYASAG 494
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/615 (38%), Positives = 373/615 (60%), Gaps = 37/615 (6%)
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
+++ R+FD + + N WN ++ ++N +A +L+ +E+V +S
Sbjct: 89 ESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLY-----YEMVVAHSR-------- 135
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVS 286
++ ++ ++ + + +AE + L + D ++ +
Sbjct: 136 --------------PNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIR 181
Query: 287 GYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-VASWN 344
Y G++ EAR I D E + V WNAMI GY++ ++ ARELFE M ++ +++WN
Sbjct: 182 MYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWN 241
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
MI+G+++ G + AR FD M + D ISW+A+I GY Q G ++L +F +M++ R
Sbjct: 242 AMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRP 301
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ SVLS CANL +L+ G+ +H + + +G +L+ MY KCG ++ A+ F
Sbjct: 302 RKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVF 361
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E++ +K+V SWN MI G A HG +DA+ LF M I P++IT VG+L+AC+H GLV+
Sbjct: 362 EKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQ 418
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
KG F SM ++YGV P +HY C+VDLLGRAG L EA+ ++ ++P EP A WGALLGA
Sbjct: 419 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 478
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CR +G EL E+ +++ E+EP+N+G Y LLSN+YA +GRW +V +VR M++RG+K
Sbjct: 479 CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTP 538
Query: 645 GYSWLEV-QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G S +++ + +VH F +GD HP+ IY L++++ +L+ +G+ VL D+ EEEK
Sbjct: 539 GTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEK 598
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E + HSEKLA+ +G+++ G IR++KNLRVCEDCH+A K IS++ R II+RD R
Sbjct: 599 ETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIR 658
Query: 764 FHHFSGGSCSCGDYW 778
+HHF G+CSC D+W
Sbjct: 659 YHHFRNGACSCKDFW 673
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 159/358 (44%), Gaps = 54/358 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFD-QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
++ I Y G+L AR++ D + + D V WN MI GY+R + AAR LFE MP R +
Sbjct: 177 SSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM 236
Query: 155 VS-WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
+S WN M+SG+++ G + AR FD M E++EISW+ ++ Y+Q G EA +F
Sbjct: 237 ISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQK 296
Query: 214 WEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
++ S++ L +WI YA+ N +
Sbjct: 297 EKIRPRKFVLPSVLSACANLGALDQGRWIHT----------------YAKRNSIQ----- 335
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
D T++V Y + G++D A +F+ M K SWNAMI G R + A
Sbjct: 336 ------LDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAI 389
Query: 330 ELFEAMTC-KNVASWNTMITGYAQSGEITHARNLFDRM-------PQHDCISWAAIIAGY 381
+LF M N ++ ++ A G + +F+ M PQ + + I+
Sbjct: 390 DLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIE--HYGCIVDLL 447
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSV----LSTCANLASLELGKQLHGQLVKV 435
++G L E ++ + P +V L C ++ELG+++ L+++
Sbjct: 448 GRAG-------LLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL 498
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 200/485 (41%), Gaps = 89/485 (18%)
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNG 190
R S ++ +F+ + K +V WN M+ +N A ++ M+ N+ ++
Sbjct: 84 RYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPA 143
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ----KRLGDAKWIFD-RMPVR 245
+L A +G + E + + ++ ++ RL +A+ I D +
Sbjct: 144 VLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 203
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF-TWTAMVSGYVQNGKVDEARMIFDAM 304
D V WN MI GY + + A+ LFE P + + TW AM+SG+ + G V+ AR FD M
Sbjct: 204 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEM 263
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN--- 344
E++ +SW+AMI GY+Q A E+F M C N+ + +
Sbjct: 264 KERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR 323
Query: 345 -------------------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+++ YA+ G I A +F++M + SW A+I G A G
Sbjct: 324 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHG 383
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ED++ LF +M Y N F VL+ CA HG LV+ G + N
Sbjct: 384 RAEDAIDLFSKMDIYP---NEITFVGVLNACA-----------HGGLVQKGLT----IFN 425
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
++ Y VE + IVD R G +A + S+ T +P
Sbjct: 426 SMRKEY----GVEPQIEHYGCIVDL-----------LGRAGLLTEAEKVVSSIPT---EP 467
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQN 564
+L AC G VE G + + P NS YT + ++ +AGR +E
Sbjct: 468 TPAVWGALLGACRKHGNVELGERVGKIL---LELEPQNSGRYTLLSNIYAKAGRWEEVGE 524
Query: 565 LMKNM 569
+ K M
Sbjct: 525 VRKLM 529
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 158/331 (47%), Gaps = 24/331 (7%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVS-YNAMISGYLLNGQLDPARQV 114
G+ D WN I ++R G ++A +F MP RS +S +NAMISG+ G ++ AR+
Sbjct: 200 GGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREF 259
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYA 170
FD+M +RD +SW+ MI GY++ A +F M K + ++LS A G
Sbjct: 260 FDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGAL 319
Query: 171 DAARRIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
D R I ++N I +G+L Y + GRI+ A +FE +N EV SWN+++GG
Sbjct: 320 DQGRWIHT-YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 378
Query: 226 FVKQKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVF 279
R DA +F +M + +E+++ ++ A + + +F E +
Sbjct: 379 LAMHGRAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIE 438
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDMAR---ELFEAM 335
+ +V + G + EA + ++P + T + W A++ + +++ ++ +
Sbjct: 439 HYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL 498
Query: 336 TCKNVASWNTMITGYAQSG---EITHARNLF 363
+N + + YA++G E+ R L
Sbjct: 499 EPQNSGRYTLLSNIYAKAGRWEEVGEVRKLM 529
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/539 (43%), Positives = 343/539 (63%), Gaps = 15/539 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------ 304
+ +I Y++ + ++F+E P K TW++++S + QN A F M
Sbjct: 64 HNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVR 123
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHA 359
P+ + G++ +R D+ + + + K +V ++++ YA+ GEI A
Sbjct: 124 PDDHIYPSATKACGFL--RRSDVGKSV-HCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R+LFD MP+ + +SW+ +I GYAQ ++L LF + +N F+SV+ C++
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
LELGK +HG +K+ F++ FVG+AL+ +Y KCG +E AY F+EI +++ WN+M+
Sbjct: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
A+H + LFE M VG+KP+ I + +L ACSH GLVEKG EYF S+ RDYG+
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYF-SLMRDYGI 359
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P ++HY +VDLLGRAG+L EA +++K MP P + WGALL CR++ TE+A A+
Sbjct: 360 EPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVAD 419
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
I EM+ ++G++VLLSN YAA+GR+ + +++R +RDRGVKK TG SW+E NKVHTF+
Sbjct: 420 RILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFT 479
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD H + IY LEELE ++++ G+V T VL V EEK +RYHSE+LA+A+G
Sbjct: 480 AGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFG 539
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+++ P GRPIRVMKNLRVC DCH AIK +SK GR++I+RDNNRFH F G CSCGDYW
Sbjct: 540 LITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 182/384 (47%), Gaps = 57/384 (14%)
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
LVS N +I+ Y + + + +F+ PK+ +W++++S +AQN A + F RML
Sbjct: 61 LVSHN-LINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLN 119
Query: 183 K-----NEISWNGLLA-AYVQNGRIEEA--CMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
+ I + A +++ + ++ C+ ++ +V +SL+ + K +GD
Sbjct: 120 DGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGD 179
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMV----- 285
A+ +FD MP R+ VSW+ MI GYAQ + EA LF++A ++DV FT+++++
Sbjct: 180 ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSS 239
Query: 286 SGYVQNGKVDEA---RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
S +++ GK+ +M FD+ ++ +A+I+ Y + ++ A ++F+ + +N+
Sbjct: 240 STFLELGKLIHGLCLKMSFDS----SSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGL 295
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN+M+ AQ H + +F LF EM G
Sbjct: 296 WNSMLIACAQHA---HTQRVFG----------------------------LFEEMGNVGM 324
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ N F SVL C++ +E G++ + G E +L+ + + G ++EA
Sbjct: 325 KPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVS 384
Query: 463 AFEEIVDKDVIS-WNTMIAGYARH 485
+++ + S W ++ G H
Sbjct: 385 VIKQMPMRPTESVWGALLTGCRIH 408
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 162/376 (43%), Gaps = 65/376 (17%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGY---------------LLNGQLDPARQVFDQMPQR--- 121
+L VF+ P++SS +++++IS + +LN + P ++ +
Sbjct: 79 SLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGF 138
Query: 122 ---------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
D+ + ++ Y + + AR+LF+ MP+R+VVSW+ M
Sbjct: 139 LRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGM 198
Query: 161 LSGYAQNGYADAARRIFDRML----EKNEISWNGLL-----AAYVQNGRIEEACMLFESK 211
+ GYAQ A +F + L + N+ +++ ++ + +++ G++ L K
Sbjct: 199 IYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCL---K 255
Query: 212 ANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
+++ S+ ++L+ + K + A +FD +P R+ WN+M+ AQ+ + L
Sbjct: 256 MSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGL 315
Query: 270 FEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQ 321
FEE + + +++ G V++ R F M E T + +++ +
Sbjct: 316 FEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGR 375
Query: 322 TKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA- 379
++ A + + M + S W ++TG + A + DR+ + D S +
Sbjct: 376 AGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLL 435
Query: 380 --GYAQSGYSEDSLRL 393
YA +G E++ R+
Sbjct: 436 SNAYAAAGRYEEAARM 451
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 146/331 (44%), Gaps = 33/331 (9%)
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQ 166
QVFD+ P++ +W+ +IS + +N++ A F M P + T G+ +
Sbjct: 81 QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLR 140
Query: 167 NGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
+D + + ++ + + L+ Y + G I +A LF+ VVSW+ +
Sbjct: 141 R--SDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGM 198
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNYLAEAQRLFEEAPVK-- 276
+ G+ + +A +F + + D + +++++I + + +L E +L +K
Sbjct: 199 IYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFL-ELGKLIHGLCLKMS 257
Query: 277 ---DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
F +A++S Y + G ++ A +FD +P +N WN+M+ Q LFE
Sbjct: 258 FDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFE 317
Query: 334 AM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSG 385
M N + +++ + +G + R F M + + +A+++ ++G
Sbjct: 318 EMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAG 377
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
++++ + +M R S + ++L+ C
Sbjct: 378 KLQEAVSVIKQMPM---RPTESVWGALLTGC 405
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
SL G QLH ++K G + V + L+ +Y K + F+E K +W+++I+
Sbjct: 40 SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
+A++ AL F M G++PDD AC + G + + G
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS-VHCLAVKTGYY 158
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+ + +VD+ + G + +A++L MP E + +W + +YG +L
Sbjct: 159 CDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSWSGM-----IYGYAQL 205
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 54/248 (21%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLD---PARQVFD 116
D+ + + + + G A H+F+ MP R+ VS++ MI GY QLD A +F
Sbjct: 160 DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGY---AQLDDGVEALTLFK 216
Query: 117 QMPQRDL--------------------------------VSWN-------VMISGYVRNK 137
Q D+ +S++ +IS Y +
Sbjct: 217 QALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCG 276
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA 193
+ A +F+ +P R++ WN+ML AQ+ + +F+ M ++ N I + +L
Sbjct: 277 VIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLY 336
Query: 194 AYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
A G +E+ F ++ E + SL+ + +L +A + +MP+R E
Sbjct: 337 ACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396
Query: 249 SWNTMITG 256
W ++TG
Sbjct: 397 VWGALLTG 404
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 284/849 (33%), Positives = 417/849 (49%), Gaps = 168/849 (19%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
NA+I+ Y G+++ A +VFD M RD +SWN MI G N A +LF M +
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE 302
Query: 155 VSWNTMLS------------------GYA------------QNGYADAA----------- 173
+S T+LS GY+ Q+G DAA
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVK 362
Query: 174 -------RRIFDRMLEKNEIS-WNGLLAAYVQNGRIEEACMLFESKANWEVVS------- 218
RR+FD M K + WN ++ Y + G EE+ LF +
Sbjct: 363 CGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422
Query: 219 --------------------------------WNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
N+L+ + K +GDA +F+RMP +D
Sbjct: 423 LLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQD 482
Query: 247 EVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFT-------------WTA--MVSG 287
+SWN++I+G + N +EA LF + D T W A +V G
Sbjct: 483 TISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHG 542
Query: 288 Y-VQNGKVDEARM-------------------IFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
Y V+ G + E + IF +M +KN VSW AMI Y++ D
Sbjct: 543 YSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDK 602
Query: 328 ARELFEAMTC--------------------------KNVASW-------------NTMIT 348
L + M K+V + N ++
Sbjct: 603 VAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALME 662
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
Y + + AR +FDR+ D ISW +I GY+++ + +S LF +M R N
Sbjct: 663 MYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVT 721
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
T +L A+++SLE G+++H ++ GF + NAL+ MY KCG++ A F+ +
Sbjct: 722 MTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLT 781
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
K++ISW MIAGY HGFGK A+ LFE M+ GI+PD + IL AC H+GL +G
Sbjct: 782 KKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRR 841
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+F +M ++Y + P KHYTC+VDLL R G L EA +++MP EPD++ W +LL CR++
Sbjct: 842 FFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIH 901
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
+LAEK A+ +F++EPEN G YVLL+N+YA + RW V K++ K+ RG+++ TGYSW
Sbjct: 902 KNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSW 961
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
+EV++KVH F + HP+ +RI +L+++ +++Q+G K L + + L
Sbjct: 962 IEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALC 1021
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
HS KLAVA+G+L++P GRPIRV KN +VC CH A K ISK+ R IILRD++RFH F
Sbjct: 1022 GHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFE 1081
Query: 769 GGSCSCGDY 777
GG CSC Y
Sbjct: 1082 GGRCSCRGY 1090
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 152/601 (25%), Positives = 261/601 (43%), Gaps = 83/601 (13%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQR--DLVSWNVMISGYVRNKSLSAARNLFE 147
+ SV ++ YL G L AR VFD MP + D+ W ++S Y + A +LF
Sbjct: 134 KGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFR 193
Query: 148 MMP----KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW-----NGLLAAYVQN 198
M D + + +L + G I +LEK + N L+A Y +
Sbjct: 194 QMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHG-LLEKLGLGQACAVANALIAVYSRC 252
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-PVRDEVSWNTMIT-- 255
GR+E+A +F+S + +SWNS++GG G A +F +M E+S T+++
Sbjct: 253 GRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVL 312
Query: 256 -----------GYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
G A + Y ++ L+ ++ + D + +V YV+ G + AR +
Sbjct: 313 PACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRV 372
Query: 301 FDAMPEKNTVS-WNAMIAGYVQTKRMDMARELF-------------------EAMTC--- 337
FDAM K V WN ++ GY + + + LF + +TC
Sbjct: 373 FDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSC 432
Query: 338 -----------------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
A N +I+ YA+S I A +F+RMP+ D ISW ++I+G
Sbjct: 433 ARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISG 492
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
+ +G + +++ LFI M G+ L+ SVL CA G+ +HG VK G
Sbjct: 493 CSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGE 552
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+ NALL MY C + F + K+V+SW MI Y R G L + M
Sbjct: 553 TSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVL 612
Query: 501 VGIKPDDITMVGILSACSHTGLVEKG-TEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAGR 558
GI+PD + L A + +++G + + Y++ N ++P + ++++ +
Sbjct: 613 DGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVA---NALMEMYVKCRN 669
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA----AEVIFEMEPENAGMYVL 614
++EA+ L+ + D +W L+G Y + ++ ++++ + P M +
Sbjct: 670 VEEAR-LIFDRVTNKDVISWNTLIGG---YSRNNFPNESFSLFSDMLLQFRPNAVTMTCI 725
Query: 615 L 615
L
Sbjct: 726 L 726
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 181/393 (46%), Gaps = 58/393 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQ 120
N I+ + ++ A+ VFN MPR+ ++S+N++ISG NG A ++F +M +
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYADAARRI 176
D V+ ++ +++ A R + K ++ N +L Y+ + +I
Sbjct: 516 LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-------------------------- 210
F M +KN +SW ++ +Y++ G ++ L +
Sbjct: 576 FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESL 635
Query: 211 KANWEVVSW-------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
K V + N+LM +VK + + +A+ IFDR+ +D +SWNT+I GY
Sbjct: 636 KQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGY 695
Query: 258 AQNNYLAEAQRLFEEAPVK---DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTV 310
++NN+ E+ LF + ++ + T T ++ ++ R I + ++
Sbjct: 696 SRNNFPNESFSLFSDMLLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSY 755
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP--- 367
+ NA++ YV+ + +AR LF+ +T KN+ SW MI GY G HA LF++M
Sbjct: 756 ASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSG 815
Query: 368 -QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+ D S++AI+ SG + + R F M++
Sbjct: 816 IEPDAASFSAILYACCHSGLAAEGRRFFKAMQK 848
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 152/354 (42%), Gaps = 60/354 (16%)
Query: 72 MRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP---------- 119
M + C D S +F SM +++ VS+ AMI+ Y+ G D + +M
Sbjct: 562 MYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFA 621
Query: 120 -----------------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
++ L N ++ YV+ +++ AR +F+ +
Sbjct: 622 VTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVT 681
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRML---EKNEISWNGLLAAY-----VQNGRIE 202
+DV+SWNT++ GY++N + + + +F ML N ++ +L A ++ GR
Sbjct: 682 NKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRPNAVTMTCILPAAASISSLERGREI 741
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
A L S N+L+ +VK L A+ +FDR+ ++ +SW MI GY + +
Sbjct: 742 HAYALRRGFLEDSYAS-NALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGF 800
Query: 263 LAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WN 313
A LFE+ D +++A++ +G E R F AM ++ + +
Sbjct: 801 GKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYT 860
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRM 366
++ +T + A E E+M + +S W +++ G + A + D++
Sbjct: 861 CIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKV 914
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEA-----GCFVGNALLVMYCKCGSVEEAYHA 463
+ V+ C SLE K+ H L++ A G +G L++ Y KCG + EA
Sbjct: 100 YCMVVQLCGEERSLEAAKRAHA-LIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTV 158
Query: 464 FEEIVDK--DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + + DV W ++++ YA+ G ++A+ LF M+ G+ PD + +L S G
Sbjct: 159 FDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLG 218
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+ +G E + + G+ ++ + R GR+++A + +M DA +W ++
Sbjct: 219 SLTEG-EVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM-HPRDAISWNSM 276
Query: 582 LGAC 585
+G C
Sbjct: 277 IGGC 280
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 270/790 (34%), Positives = 412/790 (52%), Gaps = 96/790 (12%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N +T + R G +AL +FN+MP R +V++N++I+ L + PA RD++
Sbjct: 100 NALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDAL-----RDML 154
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
+S + L A +L E D+ + +NG+ D R
Sbjct: 155 LEGHPLSSFTLVSVLLACSHLAE-----DLRLGREAHAFALKNGFLDGDERF-------- 201
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWE-----VVSWNSLMGGFVKQKRLGDAKWIF 239
++N LL+ Y + G +++A MLF S + VV+WN+++ V+ R G+A +
Sbjct: 202 --AFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVI 259
Query: 240 DRMPVR----DEVSWNTMITGYAQNNYLA-----EAQRLFEEAPVKDVFTWTAMVSGYVQ 290
M R D +++ + + +Q L+ A L + + F +A+V Y
Sbjct: 260 YDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYAS 319
Query: 291 NGKVDEARMIFDAMP--EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
+ +V AR +FD +P + WNAM+ GY Q + A ELF M + V T I
Sbjct: 320 HERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTI 379
Query: 348 TG---------------------------------------YAQSGEITHARNLFDRMPQ 368
G YA+ G++ AR +F +
Sbjct: 380 AGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEP 439
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL------------------NRSPFT 410
D +SW +I G G+ D+ +L EM++ G N
Sbjct: 440 RDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLM 499
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
++L CA LA+ GK++HG ++ ++ VG+AL+ MY KCG + + F+ + +
Sbjct: 500 TLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR 559
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEY 529
+VI+WN +I Y HG G +A+ LF+ M KP+++T + L+ACSH+G+V++G E
Sbjct: 560 NVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMEL 619
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM-PFEPDAATWGALLGACRLY 588
F+SM R++GV P + C VD+LGRAGRLDEA +++ +M P E + W + LGACRL+
Sbjct: 620 FHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLH 679
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
L E AAE +F++EP+ A YVLL N+Y+A+G W S+VR +MR RGV K G SW
Sbjct: 680 RNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSW 739
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
+E+ +H F G++ HPE ++A+++ L +++ G+ T VLHD+ E EK +LR
Sbjct: 740 IELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILR 799
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
YHSEKLA+A+G+L P G IRV KNLRVC DCH A K IS++VGR I+LRD RFHHF
Sbjct: 800 YHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFV 859
Query: 769 GGSCSCGDYW 778
G+CSCGDYW
Sbjct: 860 DGACSCGDYW 869
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 226/518 (43%), Gaps = 46/518 (8%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVFD 116
+ WN ++ +++G C A+ V M R +++ + + L R++
Sbjct: 236 VVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHA 295
Query: 117 QMPQRDLVSWNVMISG-----YVRNKSLSAARNLFEMMP--KRDVVSWNTMLSGYAQNGY 169
+ + ++ N ++ Y ++ + AR +F+M+P R + WN M+ GYAQ G
Sbjct: 296 YVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGM 355
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG---- 225
+ A +F RM + G++ + + AC E+ A E V L G
Sbjct: 356 DEEALELFARMEAE-----AGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADN 410
Query: 226 -FVKQ------KRLGD---AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
FV+ RLGD A+WIF + RD VSWNT+ITG ++ +A +L E
Sbjct: 411 PFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQ 470
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+ FT G DE ++ + + + AM+A + K + + A+
Sbjct: 471 QGRFTDATTEDGI---AGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIH-GYAMRHAL 526
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++A + ++ YA+ G + +R +FDR+P+ + I+W +I Y G ++++ LF
Sbjct: 527 D-SDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFD 585
Query: 396 EMKRYGE-RLNRSPFTSVLSTCANLASLELGKQL-HGQLVKVGFEAGCFVGNALLVMYCK 453
M E + N F + L+ C++ ++ G +L H G + + + + +
Sbjct: 586 RMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGR 645
Query: 454 CGSVEEAYHAFE--EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT-M 510
G ++EAY E ++ V +W++ + H L + + ++PD+ +
Sbjct: 646 AGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLH--RNVPLGEIAAERLFQLEPDEASHY 703
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
V + + S GL EK +E M R GV SK C
Sbjct: 704 VLLCNIYSAAGLWEKSSEVRNRM-RQRGV---SKEPGC 737
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 53/343 (15%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS-VSYNAMISGYL--------LN 105
P G + WN + + + G + AL +F M + V I+G L
Sbjct: 334 PGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFA 393
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G+ V + + N ++ Y R + AAR +F + RDVVSWNT+++G
Sbjct: 394 GKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCV 453
Query: 166 QNGYADAARRIFDRMLEK----NEISWNGLLAA----YVQNG----RIEEACMLFESKA- 212
G+ A ++ M ++ + + +G+ V N + C + + A
Sbjct: 454 VQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAK 513
Query: 213 -------------NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+ ++ ++L+ + K L ++ +FDR+P R+ ++WN +I Y
Sbjct: 514 GKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGM 573
Query: 260 NNYLAEAQRLFE------EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PE 306
+ EA LF+ EA +V T+ A ++ +G VD +F +M P
Sbjct: 574 HGLGDEAIALFDRMVMSNEAKPNEV-TFIAALAACSHSGMVDRGMELFHSMKRNHGVQPT 632
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTC--KNVASWNTMI 347
+ + I G + R+D A + +M + V++W++ +
Sbjct: 633 PDLHACAVDILG--RAGRLDEAYSIITSMEPGEQQVSAWSSFL 673
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 100/259 (38%), Gaps = 40/259 (15%)
Query: 415 TCANLASLELGKQLHGQLVKV----GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+ A L SL + +HG ++ GF V NALL Y +CG + A F + +
Sbjct: 68 SAAALRSLIAVRSIHGAALRRDLLHGFTPA--VANALLTAYARCGDLTAALALFNAMPSR 125
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D +++N++IA AL M G T+V +L ACSH +
Sbjct: 126 DAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREA 185
Query: 531 YSMNRDYGVIPNSKHYT--CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
++ G + + + ++ + R G +D+AQ L+
Sbjct: 186 HAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQ----------------------MLF 223
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK--VTGY 646
G + + + + + +L SGR G+ +V M RGV+ +T
Sbjct: 224 GSVDTTDSPGGGVVT--------WNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFA 275
Query: 647 SWLEVQNKVHTFSVGDTLH 665
S L +++ S+G +H
Sbjct: 276 SALPACSQLEMLSLGREMH 294
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/673 (38%), Positives = 377/673 (56%), Gaps = 83/673 (12%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N + Y + GR+ A F+ ++ V S+N+++ + K+ R A +FD++P D V
Sbjct: 47 NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV 106
Query: 249 SWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSG----------------- 287
S+NT+I+ YA A A LF E D FT +A+++
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVS 166
Query: 288 ----------------YVQNGKVDEARMIFDAMPE-KNTVSWNAMIAGYVQTKRMDMARE 330
Y +NG +D+A+ +F M ++ VSWN+MI Y Q + A
Sbjct: 167 SGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALG 226
Query: 331 LFEAM----------TCKNVASWNTMI---------------TGYAQS------------ 353
LF+ M T +V + T + TG+ Q+
Sbjct: 227 LFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYS 286
Query: 354 ---GEITHARNLFDRMPQHDCISWAAIIAGYAQSG-YSEDSLRLFIEMKRYGERLNRSPF 409
G ++ R +F+ + + D + W +++GY+Q+ + ED+L F +M+ G R N F
Sbjct: 287 KCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSF 346
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIV 468
V+S C+NL+S GKQ+H +K + V NAL+ MY KCG++++A F+ +
Sbjct: 347 VCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA 406
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ + +S N+MIAGYA+HG ++L LF+ M I P IT + +LSAC+HTG VE+G
Sbjct: 407 EHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWN 466
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF M + + P ++HY+CM+DLLGRAG+L EA+NL+ MPF P + W +LLGACR +
Sbjct: 467 YFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTH 526
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
G ELA KAA + ++EP NA YV+LSN+YA++GRW +V+ VR MRDRGVKK G SW
Sbjct: 527 GNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSW 586
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL-HDVGEE--EKEH 705
+EV+ ++H F D+ HP IY +LEE+ K+K+ G+V + L D G EKE
Sbjct: 587 IEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEI 646
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L +HSEKLAVA+G++S G P+ V+KNLR+C DCHNAIK IS I GR I +RD +RFH
Sbjct: 647 RLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFH 706
Query: 766 HFSGGSCSCGDYW 778
F G CSCGDYW
Sbjct: 707 CFKEGQCSCGDYW 719
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 149/584 (25%), Positives = 241/584 (41%), Gaps = 136/584 (23%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
+L++ + +P + S N I Y G+L AR+ F + ++ S+N +I+ Y +
Sbjct: 32 SLYIKSFIPPSTYFS-NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRP 90
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY 195
A LF+ +P+ D+VS+NT++S YA G A +F M L+ + + + ++ A
Sbjct: 91 LIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITAC 150
Query: 196 VQN-GRIEEACMLFESKANWEVVSW-NSLMGGFVKQKRLGDAKWIFDRM-PVRDEVSWNT 252
+ G I + + S VS N+L+ + K L DAK +F M +RDEVSWN+
Sbjct: 151 CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNS 210
Query: 253 MITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMV---------------------SG 287
MI Y Q+ ++A LF+E + D+FT +++ +G
Sbjct: 211 MIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTG 270
Query: 288 YVQN---------------GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR-MDMAREL 331
+ QN G + + R +F+ + E + V WN M++GY Q + ++ A E
Sbjct: 271 FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALEC 330
Query: 332 FEAM-----------------TCKNVASW-----------------------NTMITGYA 351
F M C N++S N +I Y+
Sbjct: 331 FRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYS 390
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G + AR LFDRM +H+ +S ++IAGYAQ G +SL LF M F S
Sbjct: 391 KCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFIS 450
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
VLS CA+ G VEE ++ F + +K
Sbjct: 451 VLSACAHT-----------------------------------GRVEEGWNYFNMMKEKF 475
Query: 472 VIS-----WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I ++ MI R G +A L M P I +L AC G +E
Sbjct: 476 NIEPEAEHYSCMIDLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGACRTHGNIELA 532
Query: 527 TEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ + N+ + P N+ Y + ++ AGR +E + K M
Sbjct: 533 VK---AANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFM 573
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 221/540 (40%), Gaps = 84/540 (15%)
Query: 5 NRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRH---LNSK------SRNKPKP 55
R R L +CI + + L S + P H L SK +R +
Sbjct: 9 QRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQD 68
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
D ++ +N I + + A +F+ +P VSYN +IS Y G+ PA +F
Sbjct: 69 ISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLF 128
Query: 116 DQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD--VVSWNTMLSGYAQNGY 169
M + D + + +I+ + L + + D V N +L+ Y +NG
Sbjct: 129 SGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 170 ADAARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVSWNSLM- 223
D A+R+F M ++E+SWN ++ AY Q+ +A LF+ N ++ + S++
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 224 --------------------GGFVKQKRLG---------------DAKWIFDRMPVRDEV 248
GF + +G D + +F+ + D V
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 249 SWNTMITGYAQN-NYLAEAQRLFEE----------APVKDVFTWTAMVSGYVQNGKVDEA 297
WNTM++GY+QN +L +A F + V + + +S Q ++
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ D +P NA+IA Y + + AR LF+ M N S N+MI GYAQ G
Sbjct: 369 ALKSD-IPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEM 427
Query: 358 HARNLF----DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP----F 409
+ +LF +R I++ ++++ A +G E+ F MK E+ N P +
Sbjct: 428 ESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMK---EKFNIEPEAEHY 484
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC-GSVEEAYHAFEEIV 468
+ ++ L + L + ++ F G +G A L+ C+ G++E A A +++
Sbjct: 485 SCMIDLLGRAGKLSEAENL---IARMPFNPGS-IGWASLLGACRTHGNIELAVKAANQVL 540
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 57/254 (22%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F +L TC L GK LH +K + N +++Y KCG + A AF++I
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 469 D-------------------------------KDVISWNTMIAGYARHGFGKDALMLFES 497
D D++S+NT+I+ YA G AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 498 MKTVGIKPDDITMVGILSACS---------HTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
M+ +G+ D T+ +++AC H+ V G + + S+N
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN------------NA 178
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE- 607
++ G+ G LD+A+ + M D +W +++ A YG+ + KA + EM
Sbjct: 179 LLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVA---YGQHQEGSKALGLFQEMVRRG 235
Query: 608 -NAGMYVLLSNLYA 620
N M+ L S L A
Sbjct: 236 LNVDMFTLASVLTA 249
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/536 (42%), Positives = 333/536 (62%), Gaps = 11/536 (2%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PE 306
+I Y++ N + +LF+ P K TW++++S + QN A F M P+
Sbjct: 48 LINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPD 107
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK--NVASWNTMITGYAQSGEITHARNLFD 364
+T+ A + + + ++ T +V ++++ YA+ G++ AR +FD
Sbjct: 108 DHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFD 167
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM--KRYGERLNRSPFTSVLSTCANLASL 422
MP + +SW+ +I GY+Q G E++L LF + Y R+N +SVL C+
Sbjct: 168 EMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLF 227
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
ELGKQ+HG K F++ CFV ++L+ +Y KCG VE Y FEE+ +++ WN M+
Sbjct: 228 ELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIAC 287
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A+H LFE M+ VG+KP+ IT + +L ACSH GLVEKG E+ + + +++G+ P
Sbjct: 288 AQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKG-EHCFGLMKEHGIEPG 346
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
S+HY +VDLLGRAG+L+EA ++K MP +P + WGALL CR++G TELA A+ +F
Sbjct: 347 SQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVF 406
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
EM ++G+ VLLSN YAA+GRW + ++ R MRD+G+KK TG SW+E N+VHTF+ GD
Sbjct: 407 EMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGD 466
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
H + IY LEEL ++ + G+V T VL +V +EK +RYHSE+LA+A+G+++
Sbjct: 467 RSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLIT 526
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P PIRVMKNLRVC DCH AIK ISK GR+II+RDNNRFH F G C+CGDYW
Sbjct: 527 FPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 176/406 (43%), Gaps = 58/406 (14%)
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G L+GQ+ + F+ +P LV + +I+ Y + ++ LF+ P + +W+++
Sbjct: 26 GLQLHGQV--IKLGFEAIP---LVCHH-LINFYSKTNLPHSSLKLFDSFPHKSATTWSSV 79
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN--------GRIEEACMLFESKA 212
+S +AQN A R F RML + + L ++ + + ++
Sbjct: 80 ISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAH 139
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ +V +SL+ + K + A+ +FD MP ++ VSW+ MI GY+Q EA LF+
Sbjct: 140 HHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKR 199
Query: 273 APVKDV------FTWTAMV-----SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
A +D FT ++++ S + GK + F + + +++I+ Y +
Sbjct: 200 ALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHG-LCFKTSFDSSCFVASSLISLYSK 258
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
++ ++FE + +N+ WN M+ AQ +
Sbjct: 259 CGVVEGGYKVFEEVKVRNLGMWNAMLIACAQ----------------------------H 290
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
A +G + LF EM+R G + N F +L C++ +E G+ G + + G E G
Sbjct: 291 AHTG---RTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGS 347
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS-WNTMIAGYARHG 486
L+ + + G +EEA +E+ + S W ++ G HG
Sbjct: 348 QHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHG 393
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 196/456 (42%), Gaps = 64/456 (14%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN-- 136
S+L +F+S P +S+ +++++IS + N PA + F +M + L+ + + ++
Sbjct: 60 SSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVA 119
Query: 137 ------KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
+LS + DV ++++ YA+ G + AR++FD M KN +SW+G
Sbjct: 120 ALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSG 179
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
++ Y Q G EEA LF+ + R+ D F V S
Sbjct: 180 MIYGYSQMGLDEEALNLFKRALEQDY------------DIRVND----FTLSSVLRVCSA 223
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+T+ Q + L F+ + F ++++S Y + G V+ +F+ + +N
Sbjct: 224 STLFELGKQVHGLC-----FKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLG 278
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRM 366
WNAM+ Q ELFE M N ++ ++ + +G + + F M
Sbjct: 279 MWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLM 338
Query: 367 PQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
+H +A ++ ++G E+++ + EM + S + ++L+ C +
Sbjct: 339 KEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPM---QPTESVWGALLTGCRIHGNT 395
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVM----YCKCGSVEEAYHAFEEIVDKDV-----I 473
EL + ++ FE G V + + V+ Y G EEA A + + D+ + +
Sbjct: 396 ELASFVADKV----FEMGA-VSSGIQVLLSNAYAAAGRWEEAARARKMMRDQGIKKETGL 450
Query: 474 SW-------NTMIAGYARHGFGKDALMLFESMKTVG 502
SW +T AG HG ++ ++E ++ +G
Sbjct: 451 SWVEEGNRVHTFAAGDRSHGKTRE---IYEKLEELG 483
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 412 VLSTCANLA----------SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
VLS C ++ SL G QLHGQ++K+GFEA V + L+ Y K +
Sbjct: 3 VLSDCRDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSL 62
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
F+ K +W+++I+ +A++ AL F M G+ PDD T+
Sbjct: 63 KLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTL 111
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 122/282 (43%), Gaps = 29/282 (10%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K A D+ + + T+ + G + A VF+ MP ++ VS++ MI GY G + A
Sbjct: 136 KTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALN 195
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSL--SAARNLFEMMPKRDVVSWNT-----------M 160
+F + ++D +++ ++ + + L +A LFE+ + + + T +
Sbjct: 196 LFKRALEQD---YDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSL 252
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES------KANW 214
+S Y++ G + ++F+ + +N WN +L A Q+ LFE K N+
Sbjct: 253 ISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNF 312
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF 270
+++ L+ + + F M + T++ + L EA +
Sbjct: 313 --ITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVI 370
Query: 271 EEAPVKDVFT-WTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
+E P++ + W A+++G +G + A + D + E VS
Sbjct: 371 KEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVS 412
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/690 (36%), Positives = 394/690 (57%), Gaps = 51/690 (7%)
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
S +++IS Y K L A LF+ + V++W +++ + A F M
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 185 EISWNGLLAAYVQNG------RIEEACMLFESK--ANWEVVSWNSLMGGFVKQKRLGD-- 234
+ + + +++ R E+ F + + ++ + N+LM + K +G
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKI 160
Query: 235 -AKWIFDRMPVR------DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
+FD MP R ++V T I + + +R+FE P KDV ++ +++G
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRRVFEVMPRKDVVSYNTIIAG 216
Query: 288 YVQNGKVDEA-RMI-----FDAMPEKNTVSW-------------NAMIAGYVQTKRMDMA 328
Y Q+G ++A RM+ D P+ T+S I GYV K +D
Sbjct: 217 YAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID-- 274
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+V ++++ YA+S I + +F R+ D ISW +++AGY Q+G
Sbjct: 275 ---------SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 325
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++LRLF +M + F+SV+ CA+LA+L LGKQLHG +++ GF + F+ +AL+
Sbjct: 326 EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALV 385
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG+++ A F+ + D +SW +I G+A HG G +A+ LFE MK G+KP+ +
Sbjct: 386 DMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 445
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
V +L+ACSH GLV++ YF SM + YG+ +HY + DLLGRAG+L+EA N +
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
M EP + W LL +C ++ ELAEK AE IF ++ EN G YVL+ N+YA++GRW ++
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEM 565
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+K+RL+MR +G++K SW+E++NK H F GD HP D+I +L+ + +++++G+V
Sbjct: 566 AKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYV 625
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T VLHDV EE K +L HSE+LAVA+GI++ G IRV KN+R+C DCH AIK I
Sbjct: 626 ADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFI 685
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKI R II+RDN+RFHHF+ G+CSCGDYW
Sbjct: 686 SKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 87/419 (20%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
+GD D++ A T M G DS VF MPR+ VSYN +I+GY +G + A ++
Sbjct: 176 SGDEDVK----AETCIMPFGI-DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMV 230
Query: 116 DQMPQRDLVSWNVMIS-------------------GYVRNKSLSAARNLFEMMPKRDVVS 156
+M DL + +S GYV K + + DV
Sbjct: 231 REMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS-----------DVYI 279
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
++++ YA++ + + R+F R+ ++ ISWN L+A YVQNGR EA LF +V
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 217 ----VSWNS---------------------LMGGF--------------VKQKRLGDAKW 237
V+++S L GGF K + A+
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGK 293
IFDRM V DEVSW +I G+A + + EA LFEE + V + A+++ G
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 294 VDEARMIFDAMPE----KNTVSWNAMIAGYV-QTKRMDMARELFEAMTCKNVAS-WNTMI 347
VDEA F++M + + A +A + + +++ A M + S W+T++
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIA---GYAQSGYSEDSLRLFIEMKRYGER 403
+ + + A + +++ D + A + YA +G ++ +L + M++ G R
Sbjct: 520 SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/616 (39%), Positives = 366/616 (59%), Gaps = 27/616 (4%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I Y G L+ RQ+FD+MPQR++ +WN +++G + L A +LF MP+RD
Sbjct: 59 NRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV----QNGRIEEACML 207
+WN+M+SG+AQ+ + A F M ++ NE ++ L+A N ++ ++
Sbjct: 119 TWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLI 178
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S +V ++L+ + K + DA+ +FD M R+ VSWN++IT Y QN EA
Sbjct: 179 AKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEAL 238
Query: 268 RLFE----------EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
++F+ E + V + A +S ++ G+ AR++ + + NA +
Sbjct: 239 KVFQVMLESWVEPDEVTLASVISACASLSA-IKVGQEVHARVVKMDKLRNDIILSNAFVD 297
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + R+ AR +F++M +NV + +M++GYA + AR +F +M + + +SW A+
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IAGY Q+G +E++L LF +KR F ++L CA+LA L LG Q H ++K GF
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGF 417
Query: 438 ------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
E FVGN+L+ MY KCG VEE Y F +++++D +SWN MI G+A++G+G +A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L LF M G KPD ITM+G+LSAC H G VE+G YF SM RD+GV P HYTCMVD
Sbjct: 478 LELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG L+EA+++++ MP +PD+ WG+LL AC+++ L + AE +FE+E N+G
Sbjct: 538 LLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGP 597
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVLLSN+YA G+WGD VR MR GV K G SW+++ H F V D HP K +I
Sbjct: 598 YVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQI 657
Query: 672 YAYLEEL--EFKLKQD 685
++ L+ L E + KQD
Sbjct: 658 HSLLDILIAEMRQKQD 673
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 224/516 (43%), Gaps = 95/516 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + G + +F+ MP+R+ ++N++++G G LD A +F MP+RD
Sbjct: 59 NRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR-------------------------------- 152
+WN M+SG+ ++ A F MM K
Sbjct: 119 TWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLI 178
Query: 153 -------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
DV + ++ Y++ G + A+++FD M ++N +SWN L+ Y QNG EA
Sbjct: 179 AKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEAL 238
Query: 206 MLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE-----VSWNTMITG 256
+F ES + V+ S++ + + + R+ D+ + N +
Sbjct: 239 KVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDM 298
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ + + EA+ +F+ P+++V T+MVSGY AR++F M E+N VSWNA+I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 317 AGYVQTKRMDMARELFEAM-----------------TCKNVASW---------------- 343
AGY Q + A LF + C ++A
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFK 418
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
N++I Y + G + +F +M + DC+SW A+I G+AQ+GY ++L
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVM 450
LF EM GE+ + VLS C + +E G+ + + G ++ +
Sbjct: 479 ELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538
Query: 451 YCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ G +EEA EE+ V D + W +++A H
Sbjct: 539 LGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 221/473 (46%), Gaps = 68/473 (14%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
EV N L+ + K L D + +FD+MP R+ +WN+++TG + +L EA LF P
Sbjct: 54 EVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-------SWNAMIAGYVQTKRMDM 327
+D TW +MVSG+ Q+ + +EA F M ++ V S + +G R
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQ 173
Query: 328 ARELFEAMTC-KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
L C +V + ++ Y++ G + A+ +FD M + +SW ++I Y Q+G
Sbjct: 174 IHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGP 233
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGN 445
+ ++L++F M + SV+S CA+L+++++G+++H ++VK+ + N
Sbjct: 234 AVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSN 293
Query: 446 ALLVMYCKCGSVEEAYHAFE-------------------------------EIVDKDVIS 474
A + MY KC ++EA F+ ++ +++V+S
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVS 353
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS-----HTGL-----VE 524
WN +IAGY ++G ++AL LF +K + P T IL AC+ H G+ V
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVL 413
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
K F S D + NS ++D+ + G ++E + + M E D +W A++
Sbjct: 414 KHGFKFQSGEEDDIFVGNS-----LIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
Query: 585 CRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAASGRWGDVSKVR 632
+ + +A E+ EM +P++ M +LS A G G V + R
Sbjct: 468 ---FAQNGYGNEALELFREMLDSGEKPDHITMIGVLS----ACGHAGFVEEGR 513
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 161/384 (41%), Gaps = 87/384 (22%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----------SSVSYNAMISGYLLNG 106
GD ++ WN IT + +NG AL VF M S +S A +S + G
Sbjct: 214 GDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKV-G 272
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
Q AR V + D++ N + Y + + AR +F+ MP R+V++ +M+SGYA
Sbjct: 273 QEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAM 332
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CML--------------- 207
AAR +F +M E+N +SWN L+A Y QNG EEA C+L
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANI 392
Query: 208 --------------------------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
F+S ++ NSL+ +VK + + +F +
Sbjct: 393 LKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEA 297
M RD VSWN MI G+AQN Y EA LF E D T ++S G V+E
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
R F +M V+ L + TC M+ ++G +
Sbjct: 513 RHYFSSMTRDFGVA------------------PLRDHYTC--------MVDLLGRAGFLE 546
Query: 358 HARNLFDRMP-QHDCISWAAIIAG 380
A+++ + MP Q D + W +++A
Sbjct: 547 EAKSIIEEMPVQPDSVIWGSLLAA 570
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 407 SPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE------- 458
SPF +L +C L + + +H ++K GF F+ N L+ Y KCGS+E
Sbjct: 20 SPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFD 79
Query: 459 ------------------------EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
EA F + ++D +WN+M++G+A+H ++AL
Sbjct: 80 KMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYY 139
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F M G ++ T LSACS + +G + +S+ + + + +VD+
Sbjct: 140 FAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQ-IHSLIAKSPCLSDVYIGSALVDMYS 198
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE--MEPENAGMY 612
+ G +++AQ + M + + +W +L+ G A K +V+ E +EP+ +
Sbjct: 199 KCGNVNDAQQVFDEMG-DRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLA 257
Query: 613 VLLS 616
++S
Sbjct: 258 SVIS 261
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/732 (34%), Positives = 406/732 (55%), Gaps = 62/732 (8%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTML 161
G L A +VFD++ + WN++++ ++ S + LF+ M + D +++ +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 162 SGYAQNGYADAARRIFDRML-----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
++ ++ +L E+N + N L+A Y++N R++ A +F+ +V
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITGYA--QNNYLAEAQRLFEEA 273
+SWNS++ G+V +F +M V E+ T+++ +A ++ L R
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 274 PVKDVFT-----WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
VK F+ ++ Y + G +D A+ +F M +++ VS+ +MIAGY + A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 329 RELFEAM----------------TC----------KNVASW-------------NTMITG 349
+LFE M C K V W N ++
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF---IEMKRYGERLNR 406
YA+ G + A +F M D ISW II GY+++ Y+ ++L LF +E KR+ +
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP--DE 499
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
VL CA+L++ + G+++HG +++ G+ + V N+L+ MY KCG++ A+ F++
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I KD++SW MIAGY HGFGK+A+ LF M+ GI+ D+I+ V +L ACSH+GLV++G
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+F M + + P +HY C+VD+L R G L +A ++NMP PDA WGALL CR
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++ +LAEK AE +FE+EPEN G YVL++N+YA + +W V ++R ++ RG++K G
Sbjct: 680 IHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 739
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHM 706
SW+E++ +V+ F GD+ +PE + I A+L ++ ++ ++G+ TK L D E EKE
Sbjct: 740 SWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEA 799
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
L HSEKLA+A GI+S G+ IRV KNLRVC DCH K +SK+ R I+LRD+NRFH
Sbjct: 800 LCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQ 859
Query: 767 FSGGSCSCGDYW 778
F G CSC +W
Sbjct: 860 FKDGHCSCRGFW 871
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 7/224 (3%)
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
+ +SG E++++L ++ ++ SVL CA+ SL+ GK++ + GF
Sbjct: 71 FCESGNLENAVKLLCVSGKWD--IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+G+ L +MY CG ++EA F+E+ + + WN ++ A+ G ++ LF+ M +
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G++ D T + + S V G E + G + +V + R+D
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVH-GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
A+ + M E D +W +++ Y LAEK V +M
Sbjct: 248 SARKVFDEMT-ERDVISWNSIING---YVSNGLAEKGLSVFVQM 287
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 54/270 (20%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
+DI N + + + G A VF+ M + +S+N +I GY N + A +F+ +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 119 -------PQRDLVSW---------------------------------NVMISGYVRNKS 138
P V+ N ++ Y + +
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L A LF+ + +D+VSW M++GY +G+ A +F++M +E +EIS+ LL A
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 195 YVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEV 248
+G ++E F E K V + ++ + L A + MP+ D
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 249 SWNTMITG--YAQNNYLAE--AQRLFEEAP 274
W ++ G + LAE A+++FE P
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEP 699
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/540 (42%), Positives = 338/540 (62%), Gaps = 18/540 (3%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PE 306
+I Y++ + + ++F ++P K TW++++S + QN + F M P+
Sbjct: 61 LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW--NTMITGYAQSGEITHARNLFD 364
+ G + + + F T ++ + +++I YA+ G+I +A N+FD
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY-----GERLNRSPFTSVLSTCANL 419
MP + +SW+ +I GY Q G ++SLRLF KR+ E +N +SVL C
Sbjct: 181 EMPYRNVVSWSGLIYGYVQLGEDDESLRLF---KRFLVEEENEGVNDFTLSSVLRVCGGS 237
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
L++G+ +HG K F++ CFV ++L+ +Y KCG VEEAY FEE+ +++ WN M+
Sbjct: 238 TLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAML 297
Query: 480 AGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
A+H LF+ MK+VG +K + IT + +L ACSH GLVEKG +Y++ + +DYG
Sbjct: 298 IACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKG-KYYFELMKDYG 356
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P ++HY+ MVDLLGRAG+L++A L++ MP EP + WGALL CRL+G T+LA A
Sbjct: 357 IEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVA 416
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + E+ ++G++V+LSN YAA+GRW + +K R MRDRG+KK TG SW+E N++HTF
Sbjct: 417 DRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTF 476
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
+ GD H + IY L+EL ++ + G+V T VL +V EEK +RYHSE+LA+A+
Sbjct: 477 AAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAF 536
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G ++ P G+PIRVMKNLRVC DCH AIK ISK GR+II+RDNNRFH F G C+CGDYW
Sbjct: 537 GFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 163/394 (41%), Gaps = 51/394 (12%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+I+ Y + ++ +F P + +W++++S +AQN + F ML +
Sbjct: 61 LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120
Query: 189 NGLLAAYVQNGRIEEA--------CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+ + + ++ I + C ++ + ++ +S++ + K + A +FD
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV------FTWTAMV-----SGYV 289
MP R+ VSW+ +I GY Q E+ RLF+ V++ FT ++++ S +
Sbjct: 181 EMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLL 240
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
Q G++ + F + + +++I+ Y + ++ A ++FE +T +N+ WN M+
Sbjct: 241 QMGRLIHG-LSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIA 299
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
AQ LFD+M G + N F
Sbjct: 300 CAQHAHTDKTFELFDKMKSVG------------------------------GMKANFITF 329
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
VL C++ +E GK + G E G + ++ + + G + +A EE+
Sbjct: 330 LCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPM 389
Query: 470 KDVIS-WNTMIAGYARHGFGKDALMLFESMKTVG 502
+ S W ++ G HG K A + + + +G
Sbjct: 390 EPTESVWGALLTGCRLHGNTKLASYVADRVSELG 423
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 152/355 (42%), Gaps = 61/355 (17%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGY---------------LLNGQLDPARQVF-------- 115
S+L +F+ P +S+ +++++IS + +L + P +F
Sbjct: 73 SSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCG 132
Query: 116 --DQMP--------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+P D+ + +I Y + + A N+F+ MP R+VVSW+
Sbjct: 133 ILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSG 192
Query: 160 MLSGYAQNGYADAARRIFDRMLEK------NEISWNGLL-----AAYVQNGRIEEACMLF 208
++ GY Q G D + R+F R L + N+ + + +L + +Q GR+ + F
Sbjct: 193 LIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHG-LSF 251
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
++ + +SL+ + K + +A +F+ + VR+ WN M+ AQ+ + +
Sbjct: 252 KTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFE 311
Query: 269 LFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGY 319
LF++ + T+ ++ G V++ + F+ M E T ++ M+
Sbjct: 312 LFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLL 371
Query: 320 VQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+ +++ A +L E M + S W ++TG G A + DR+ + +S
Sbjct: 372 GRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVS 426
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
SL G QLH ++K+G + + + L+ Y K + F + K +W+++I+
Sbjct: 35 SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS-HTGLVEKGTEYFYSMNRDYGV 539
+A++ +L F M G+ PDD +C + L + +++ Y +
Sbjct: 95 SFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHL 154
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ + ++D+ + G + A N+ MP+ + +W L +YG +L E
Sbjct: 155 --DIFVGSSVIDMYAKCGDICYAHNVFDEMPYR-NVVSWSGL-----IYGYVQLGEDDES 206
Query: 600 V----IFEMEPENAGM--YVLLSNLYAASG 623
+ F +E EN G+ + L S L G
Sbjct: 207 LRLFKRFLVEEENEGVNDFTLSSVLRVCGG 236
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/536 (41%), Positives = 341/536 (63%), Gaps = 8/536 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N ++ Y + L EA+R+F+ K+VF+WT +++G+VQ+G+ EA +F M ++ +
Sbjct: 80 NLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGEL 139
Query: 311 SWNAMIAGYVQT----KRMDMARELFEAM-TC---KNVASWNTMITGYAQSGEITHARNL 362
+ ++ + K + RE+ A +C ++ + N +I Y + G I A +
Sbjct: 140 PDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAV 199
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F RMP+ + ISW+ +IA + Q+ ++++L F M++ G L+R + SVL ++ +L
Sbjct: 200 FTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGAL 259
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
ELGK LH ++V G + VGN L+ MY KCGS ++A F+ +V+K+V+SWN M+A Y
Sbjct: 260 ELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAY 319
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
++G ++AL LF+SM G++P+DIT V IL CSH+G + +F M +D+G+ P
Sbjct: 320 GQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPR 379
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
H+ C++D+LGR+G+L+EA+ L++ MP DA W +LL AC + + A +AAE F
Sbjct: 380 EVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAF 439
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+ EP A Y++LSNLYAA +W + +KVR +M GV+K G SW+E+ +VH F GD
Sbjct: 440 QREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGD 499
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
++HP+K RI+ L+ L +++ G+ K+V+H + EEEK+ +L YHSEKLAVA+GI S
Sbjct: 500 SIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIAS 559
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P P+ ++KNLRVC DCH+AIK IS + GR I +RD+NRFHHF G CSCGDYW
Sbjct: 560 TPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 171/391 (43%), Gaps = 62/391 (15%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPK--- 151
+S L G +D R+ D + Q + +R K+L R + M
Sbjct: 13 LSPVLECGGVDAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTL 72
Query: 152 -RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE- 209
R N ++ Y + G A+R+FD M KN SW L+A +VQ+GR EA LF
Sbjct: 73 DRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHR 132
Query: 210 ----------------------SKA----------------NWEVVSWNSLMGGFVKQKR 231
+KA + ++V+ N+++ + K
Sbjct: 133 MCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGS 192
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSG 287
+G+A +F RMP ++ +SW+TMI + QN EA F +E D T+ +++
Sbjct: 193 IGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDA 252
Query: 288 Y-----VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
Y ++ GK R+++ + + + V N ++ Y + D AR++F++M KNV S
Sbjct: 253 YTSVGALELGKALHVRIVYAGL-DTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVS 311
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
WN M+ Y Q+G A LFD M + + I++ I+ + SG +D++ F+EM+
Sbjct: 312 WNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMR 371
Query: 399 R-YGERLNRSPFTSVLSTCANLASLELGKQL 428
+ +G F ++ LE ++L
Sbjct: 372 QDFGITPREVHFGCLIDMLGRSGKLEEAEEL 402
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 164/377 (43%), Gaps = 68/377 (18%)
Query: 30 ANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR 89
A + + R ++S + ++P+ N+ + + + G A VF++M
Sbjct: 52 AGAKALEEGRRIHRWMDSGTLDRPRFLS-------NLLVDMYGKCGSLVEAKRVFDAMQH 104
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQR---------------------------- 121
++ S+ +++G++ +G+ A Q+F +M Q
Sbjct: 105 KNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREI 164
Query: 122 -----------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
DLV+ N +I+ Y + S+ A +F MP+++V+SW+TM++ + QN A
Sbjct: 165 HSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELA 224
Query: 171 DAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSL 222
D A F M +E + I++ +L AY G +E L + + +V N+L
Sbjct: 225 DEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTL 284
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV---- 278
+ + K DA+ +FD M ++ VSWN M+ Y QN EA LF+ ++ V
Sbjct: 285 VNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPND 344
Query: 279 FTWTAMVSGYVQNGKVDEA-------RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
T+ ++ +GK +A R F P + V + +I ++ +++ A EL
Sbjct: 345 ITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPRE--VHFGCLIDMLGRSGKLEEAEEL 402
Query: 332 FEAMTC-KNVASWNTMI 347
+AM + W +++
Sbjct: 403 IQAMPVPADAVLWTSLL 419
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 148/341 (43%), Gaps = 59/341 (17%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
N ++ Y G L A++VFD M +++ SW ++++G+V++ A LF M
Sbjct: 80 NLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGEL 139
Query: 150 PKR---------------------------------DVVSWNTMLSGYAQNGYADAARRI 176
P R D+V+ N +++ Y + G A +
Sbjct: 140 PDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAV 199
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRL 232
F RM EKN ISW+ ++AA+ QN +EA + F + + +++ S++ + L
Sbjct: 200 FTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGAL 259
Query: 233 GDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
K + R+ V NT++ Y + +A+ +F+ K+V +W AM++ Y
Sbjct: 260 ELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAY 319
Query: 289 VQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM------TCK 338
QNG+ EA +FD+M N +++ ++ + + A F M T +
Sbjct: 320 GQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPR 379
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
V + +I +SG++ A L MP D + W +++
Sbjct: 380 EV-HFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLL 419
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 117/240 (48%), Gaps = 10/240 (4%)
Query: 389 DSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
D++R +++ ++ G ++ CA +LE G+++H + + F+ N L
Sbjct: 23 DAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLL 82
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KCGS+ EA F+ + K+V SW ++AG+ + G G +A+ LF M G PD
Sbjct: 83 VDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDR 142
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+ ++ + +C + +G E +S G+ + ++++ G+ G + EA +
Sbjct: 143 VALLKFIDSCGAAKALSQGRE-IHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFT 201
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM----YVLLSNLYAASG 623
MP E + +W ++ A + + ELA++A M+ E + YV + + Y + G
Sbjct: 202 RMP-EKNVISWSTMIAA---FCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVG 257
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 13/195 (6%)
Query: 15 ILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAG-DWDIRQWNVAITTHMR 73
++ Q ++R+ + + Y S L+ L + AG D I N + + +
Sbjct: 233 LMQQEGMELDRITYVSVLDAYTSVGALE--LGKALHVRIVYAGLDTSIVVGNTLVNMYGK 290
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-----QRDLVSWNV 128
G D A VF+SM ++ VS+NAM++ Y NG+ A +FD M D+ +
Sbjct: 291 CGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTI 350
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRM-LEK 183
+ K A + EM + V + ++ ++G + A + M +
Sbjct: 351 LYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPA 410
Query: 184 NEISWNGLLAAYVQN 198
+ + W LL A V +
Sbjct: 411 DAVLWTSLLCACVTH 425
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/649 (36%), Positives = 372/649 (57%), Gaps = 47/649 (7%)
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
F R + S + +++ Y + EA ++F++ + V++W S++ F Q A
Sbjct: 31 FIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRAL 90
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP---VK-----DVFTWTAMVSGY 288
F M + + ++ + R E V+ D++T A+++ Y
Sbjct: 91 ASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMY 150
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMAREL------------- 331
+ +D R +F+ MP K+ VS+N +IAGY Q+ + M RE+
Sbjct: 151 SKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLS 210
Query: 332 ---------FEAMTCKNVASW-------------NTMITGYAQSGEITHARNLFDRMPQH 369
+ + K + + ++++ YA+S I + +F + +
Sbjct: 211 SVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRR 270
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D ISW +++AGY Q+G ++LRLF +M R F+SV+ CA+LA+L LGKQLH
Sbjct: 271 DSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLH 330
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
G +++ GF F+ +AL+ MY KCG+++ A F+ + D +SW +I G+A HG G
Sbjct: 331 GYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGH 390
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+A+ LFE MK G+KP+ + V +L+ACSH GLV++ YF SM + YG+ +HY +
Sbjct: 391 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 450
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
DLLGRAG+L+EA + + M EP + W LL +C ++ ELAEK AE IF ++ EN
Sbjct: 451 ADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENM 510
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
G YVL+ N+YA++GRW +++K+RL++R +G++K SW+E++NK H F GD HP D
Sbjct: 511 GAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMD 570
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
RI +L+ + +++++G+V T VLHDV EE K +L HSE+LAVA+GI++ G I
Sbjct: 571 RINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTI 630
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RV KN+R+C DCH AIK ISKI R II+RDN+RFHHF+ GSCSCGDYW
Sbjct: 631 RVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 190/375 (50%), Gaps = 35/375 (9%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
DL + N +++ Y + + + R +FE+MP++DVVS+NT+++GYAQ+G + A R+ M
Sbjct: 139 DLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMG 198
Query: 181 ---LEKNEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
L+ + + + +L + V G+ E + + +V +SL+ + K R+
Sbjct: 199 TSDLKPDAFTLSSVLPIFSEYVDVLKGK-EIHGYVIRKGIDSDVYIGSSLVDMYAKSARI 257
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
D++ +F + RD +SWN+++ GY QN EA RLF + MVS V+ G
Sbjct: 258 EDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQ-----------MVSAKVRPG 306
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
V + +I A T+ + GYV R R +F A + ++ Y++
Sbjct: 307 AVAFSSVI-PACAHLATLHLGKQLHGYVL--RGGFGRNIFIA---------SALVDMYSK 354
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G I AR +FDRM HD +SW AII G+A G+ +++ LF EMKR G + N+ F +V
Sbjct: 355 CGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 414
Query: 413 LSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDK 470
L+ C+++ ++ + KV G A+ + + G +EEAY ++ V+
Sbjct: 415 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEP 474
Query: 471 DVISWNTMIAGYARH 485
W+T+++ + H
Sbjct: 475 TGSVWSTLLSSCSVH 489
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 179/417 (42%), Gaps = 82/417 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + DS VF MPR+ VSYN +I+GY +G + A ++ +
Sbjct: 137 DCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVRE 196
Query: 118 MPQRDL-------------------VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
M DL V I GYV K + + DV +
Sbjct: 197 MGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDS-----------DVYIGS 245
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV-- 216
+++ YA++ + + R+F + ++ ISWN L+A YVQNGR EA LF + +V
Sbjct: 246 SLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP 305
Query: 217 --VSWNS---------------------LMGGF--------------VKQKRLGDAKWIF 239
V+++S L GGF K + A+ IF
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIF 365
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVD 295
DRM + DEVSW +I G+A + + EA LFEE + V + A+++ G VD
Sbjct: 366 DRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 425
Query: 296 EARMIFDAMPE----KNTVSWNAMIAGYV-QTKRMDMARELFEAMTCKNVAS-WNTMITG 349
EA F++M + + A +A + + +++ A + M + S W+T+++
Sbjct: 426 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSS 485
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIA---GYAQSGYSEDSLRLFIEMKRYGER 403
+ + A + +++ D + A + YA +G ++ +L + +++ G R
Sbjct: 486 CSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLR 542
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/544 (40%), Positives = 346/544 (63%), Gaps = 15/544 (2%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM- 304
D V N ++ YA+ L EAQ LF++ P KD+ +WT ++SGY Q+G+ EA +F M
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198
Query: 305 -----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSG 354
P + T+S +G T D A + K NV ++++ YA+
Sbjct: 199 HLGFQPNEFTLSSLLKASG---TGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWA 255
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ A+ +F+ + + +SW A+IAG+A+ G E +RLF++M R G ++SV +
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFT 315
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA+ SLE GK +H ++K G + ++GN L+ MY K GS+++A F +V +D++S
Sbjct: 316 ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVS 375
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WN++I+GYA+HG G +AL LFE M ++P++IT + +L+ACSH+GL+++G +Y++ +
Sbjct: 376 WNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELM 434
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ + + H+ +VDLLGRAGRL+EA ++ MP +P AA WGALLG+CR++ +L
Sbjct: 435 KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLG 494
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
AAE IFE++P ++G +VLLSN+YA++GR D +KVR M++ GVKK SW+E++N+
Sbjct: 495 VYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENE 554
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
VH F D HP ++ I E++ K+K+ G+V T VL + ++++E L+YHSEKL
Sbjct: 555 VHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKL 614
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+ +L P G IR+ KN+R+C DCH+A K S+++GR II+RD NRFHHF G CSC
Sbjct: 615 ALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSC 674
Query: 775 GDYW 778
DYW
Sbjct: 675 RDYW 678
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 161/304 (52%), Gaps = 26/304 (8%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ DLV N +++ Y + SL A++LF+ MP +D+VSW ++SGY+Q+G A A +F +
Sbjct: 137 EDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 180 ML----EKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWE--VVSWNSLMGGFVK 228
ML + NE + + LL A +GR A F K ++ V +SL+ + +
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA---FSLKYGYDMNVHVGSSLLDMYAR 253
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAM 284
+ +AK IF+ + ++ VSWN +I G+A+ RLF + + FT++++
Sbjct: 254 WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSV 313
Query: 285 VSGYVQNGKVDEARMIFDAMPEK--NTVSW--NAMIAGYVQTKRMDMARELFEAMTCKNV 340
+ +G +++ + + + + +++ N +I Y ++ + A+++F + +++
Sbjct: 314 FTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDI 373
Query: 341 ASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
SWN++I+GYAQ G A LF++M Q + I++ +++ + SG ++ F
Sbjct: 374 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 433
Query: 397 MKRY 400
MK++
Sbjct: 434 MKKH 437
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 178/405 (43%), Gaps = 67/405 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N + + + G + A +F+ MP + VS+ +ISGY +GQ A +F +M
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198
Query: 119 -----PQRDLVSWNVMISG---------------------------------YVRNKSLS 140
P +S + SG Y R +
Sbjct: 199 HLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMR 258
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYV 196
A+ +F + ++VVSWN +++G+A+ G + R+F +ML E +++ + A
Sbjct: 259 EAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACA 318
Query: 197 QNGRIEEACMLFES--KANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+G +E+ + K+ + +++ N+L+ + K + DAK +F R+ +D VSWN+
Sbjct: 319 SSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNS 378
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+I+GYAQ+ AEA +LFE+ V T+ ++++ +G +DE + F+ M +
Sbjct: 379 IISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 438
Query: 309 TVSWNAMIAGYV-------QTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGE----I 356
A +A +V + R++ A + E M K A+ W ++ +
Sbjct: 439 I---EAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGV 495
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
A +F+ P HD + YA +G D+ ++ MK G
Sbjct: 496 YAAEQIFELDP-HDSGPHVLLSNIYASAGRLSDAAKVRKMMKESG 539
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
R+ ++ +L+ C L L+ G+ +H + FE + N +L MY KCGS+EEA F+
Sbjct: 105 RTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFD 164
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
++ KD++SW +I+GY++ G +AL LF M +G +P++ T+ +L A S TG +
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTGPSDH 223
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
++ + YG N + ++D+ R + EA+ + ++ + + +W AL+
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALIAGH 282
Query: 586 RLYGKTE 592
G+ E
Sbjct: 283 ARKGEGE 289
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/615 (38%), Positives = 369/615 (60%), Gaps = 37/615 (6%)
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
+++ R+FD + + N WN ++ ++N +A +L+ + ++ F K
Sbjct: 88 ESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLY----------YEMMVAHFRPNK 137
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVS 286
++ ++ + +AE + L + D ++ +
Sbjct: 138 -----------------YTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIR 180
Query: 287 GYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-VASWN 344
Y G++ EAR I D E + V WNAMI GY++ ++ ARELFE M ++ +++WN
Sbjct: 181 MYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWN 240
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
MI+G+++ G + AR FD M + D ISW+A+I GY Q G ++L +F +M++ R
Sbjct: 241 AMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRP 300
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ SVLS CANL +L+ G+ +H + + +G +L+ MY KCG ++ A+ F
Sbjct: 301 RKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVF 360
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E++ +K+V SWN MI G A HG +DA+ LF M I P++IT VG+L+AC+H GLV+
Sbjct: 361 EKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQ 417
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
KG F SM ++YGV P +HY C+VDLLGRAG L EA+ ++ ++P EP A WGALLGA
Sbjct: 418 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 477
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CR +G EL E+ +++ E+EP+N+G Y LLSN+YA +GRW +V +VR M++RG+K
Sbjct: 478 CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTP 537
Query: 645 GYSWLEV-QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G S +++ + +VH F +GD HP+ IY L++++ +L+ +G+ VL D+ EEEK
Sbjct: 538 GTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEK 597
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E + HSEKLA+ +G+++ G IR++KNLRVCEDCH+A K IS++ R II+RD R
Sbjct: 598 ETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIR 657
Query: 764 FHHFSGGSCSCGDYW 778
+HHF G+CSC D+W
Sbjct: 658 YHHFRNGACSCKDFW 672
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 159/358 (44%), Gaps = 54/358 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFD-QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
++ I Y G+L AR++ D + + D V WN MI GY+R + AAR LFE MP R +
Sbjct: 176 SSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM 235
Query: 155 VS-WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
+S WN M+SG+++ G + AR FD M E++EISW+ ++ Y+Q G EA +F
Sbjct: 236 ISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQK 295
Query: 214 WEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
++ S++ L +WI YA+ N +
Sbjct: 296 EKIRPRKFVLPSVLSACANLGALDQGRWIHT----------------YAKRNSIQ----- 334
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
D T++V Y + G++D A +F+ M K SWNAMI G R + A
Sbjct: 335 ------LDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAI 388
Query: 330 ELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRM-------PQHDCISWAAIIAGY 381
+LF M N ++ ++ A G + +F+ M PQ + + I+
Sbjct: 389 DLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIE--HYGCIVDLL 446
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSV----LSTCANLASLELGKQLHGQLVKV 435
++G L E ++ + P +V L C ++ELG+++ L+++
Sbjct: 447 GRAG-------LLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL 497
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 158/331 (47%), Gaps = 24/331 (7%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVS-YNAMISGYLLNGQLDPARQV 114
G+ D WN I ++R G ++A +F MP RS +S +NAMISG+ G ++ AR+
Sbjct: 199 GGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREF 258
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYA 170
FD+M +RD +SW+ MI GY++ A +F M K + ++LS A G
Sbjct: 259 FDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGAL 318
Query: 171 DAARRIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
D R I ++N I +G+L Y + GRI+ A +FE +N EV SWN+++GG
Sbjct: 319 DQGRWIHT-YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 377
Query: 226 FVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVF 279
R DA +F +M + +E+++ ++ A + + +F E +
Sbjct: 378 LAMHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIE 437
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDMAR---ELFEAM 335
+ +V + G + EA + ++P + T + W A++ + +++ ++ +
Sbjct: 438 HYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL 497
Query: 336 TCKNVASWNTMITGYAQSG---EITHARNLF 363
+N + + YA++G E+ R L
Sbjct: 498 EPQNSGRYTLLSNIYAKAGRWEEVGEVRKLM 528
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 198/485 (40%), Gaps = 89/485 (18%)
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNG 190
R S ++ +F+ + K +V WN M+ +N A ++ M+ N+ ++
Sbjct: 83 RYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPA 142
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ----KRLGDAKWIFD-RMPVR 245
+L A G + E + + ++ ++ RL +A+ I D +
Sbjct: 143 VLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 202
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF-TWTAMVSGYVQNGKVDEARMIFDAM 304
D V WN MI GY + + A+ LFE P + + TW AM+SG+ + G V+ AR FD M
Sbjct: 203 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEM 262
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN--- 344
E++ +SW+AMI GY+Q A E+F M C N+ + +
Sbjct: 263 KERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR 322
Query: 345 -------------------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+++ YA+ G I A +F++M + SW A+I G A G
Sbjct: 323 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHG 382
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ED++ LF +M N F VL+ CA HG LV+ G + N
Sbjct: 383 RAEDAIDLFSKMDI---NPNEITFVGVLNACA-----------HGGLVQKGLT----IFN 424
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
++ Y VE + IVD R G +A + S+ T +P
Sbjct: 425 SMRKEY----GVEPQIEHYGCIVDL-----------LGRAGLLTEAEKVVSSIPT---EP 466
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQN 564
+L AC G VE G + + P NS YT + ++ +AGR +E
Sbjct: 467 TPAVWGALLGACRKHGNVELGERVGKIL---LELEPQNSGRYTLLSNIYAKAGRWEEVGE 523
Query: 565 LMKNM 569
+ K M
Sbjct: 524 VRKLM 528
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/731 (34%), Positives = 413/731 (56%), Gaps = 29/731 (3%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMI 130
G + A +VF+ M ++S+N+MI+ Y+ NG + + F M + + + + M+
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239
Query: 131 SGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
+G +L R + ++ K +V + NT+++ Y+ G + A +F M+EK+ I
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299
Query: 187 SWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSLMGG-----FVKQKRLGDAKW 237
SWN ++A Y Q+G +A L F + V++ S + F + ++ A
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALV 359
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
I + + + N ++T YA++ + EA+++F+ P +D TW A++ G+ + + DEA
Sbjct: 360 IHVGLH-ENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEA 418
Query: 298 RMIFDAMPEKN------TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMI 347
F M E+ T+S N + A ++ + + S N++I
Sbjct: 419 LKAFKLMREEGVPINYITIS-NVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLI 477
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
T YA+ G++ + N+FDR+ + +W A++A A G+ E++L+ +EM+R G ++
Sbjct: 478 TMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEF 537
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F+ L+ A LA LE G+QLHG VK+G ++ FV +A + MY KCG +++
Sbjct: 538 SFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRP 597
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+++ +SWN + + ++RHGF + A F M +G+KPD +T V +LSACSH G+VE+G
Sbjct: 598 INRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGL 657
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
Y+ SM +++G+ H C++DLLGR+GR EA+ +K MP P W +LL AC+
Sbjct: 658 AYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKT 717
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+G EL KA E + +++P + YVL SN+ A +G+W DV K+R +M +KK S
Sbjct: 718 HGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACS 777
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
W++++NK+ F +GD HP+ IYA LEEL+ +K+ G++ L D EE+KEH L
Sbjct: 778 WVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNL 837
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
HSE+LA+AYG++S P G +++ KNLRVC DCH+ K S I+GR I+LRD RFH F
Sbjct: 838 WNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQF 897
Query: 768 SGGSCSCGDYW 778
SGG CSC DYW
Sbjct: 898 SGGQCSCTDYW 908
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 222/471 (47%), Gaps = 38/471 (8%)
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
+SG+ + G + R F NE+ G+ + + + AC ++ W ++
Sbjct: 1 MSGFVRAGSYRESMRFF------NEMRDFGVKPSGIAVASLVTAC----ERSEWMLIEGV 50
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+ G VK L D +++ Y A+A ++F+E K+V +
Sbjct: 51 QVHGFIVKVGLLSDV------------FVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVS 98
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC--- 337
WTA++ YV G+ I+ M + +S N V + + + EL
Sbjct: 99 WTALMVAYVDYGEPSMVMNIYRRMRSEG-MSCNDNTMSSVISTCVSLENELLGYQVLGHV 157
Query: 338 ------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
NV+ N++I+ + G + A +F M +HD ISW ++IA Y ++G ++SL
Sbjct: 158 IKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESL 217
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
R F M R + +N + +++L+ C ++ +L+ G+ +H ++K G+ + N L+ MY
Sbjct: 218 RCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMY 277
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
G E+A F+ +V+KD+ISWN+M+A YA+ G DAL L +M + + +T
Sbjct: 278 SDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFT 337
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
L+ACS +G + +++ G+ N +V L ++G + EA+ + + MP
Sbjct: 338 SALAACSDPEFATEG-KILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP- 395
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAA 621
+ D TW AL+G + +E ++A + M E + Y+ +SN+ A
Sbjct: 396 KRDGVTWNALIGG---HADSEEPDEALKAFKLMREEGVPINYITISNVLGA 443
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 196/477 (41%), Gaps = 83/477 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N IT + G C+ A VF M + +S+N+M++ Y +G A ++ M
Sbjct: 271 NTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRG 330
Query: 119 ---------------PQ------------------RDLVSWNVMISGYVRNKSLSAARNL 145
P+ +++ N +++ Y ++ + A+ +
Sbjct: 331 ANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKV 390
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA------Y 195
F+ MPKRD V+WN ++ G+A + D A + F M E+ N I+ + +L A
Sbjct: 391 FQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDL 450
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+++G A ++ + E V NSL+ + K L + IFDR+ ++ +WN M+
Sbjct: 451 LEHGMPIHAFIILTGFQSDEYVQ-NSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMA 509
Query: 256 GYAQNNYLAEAQRLFEE---APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
A + ++ EA + E A V D F+++ ++ + ++E + + + K
Sbjct: 510 ANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQL-HGLAVKLGCD 568
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
N +A + MDM Y + GEI + R
Sbjct: 569 SNPFVA----SATMDM----------------------YGKCGEIDDVLRIIPRPINRSR 602
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+SW + + +++ G+ E + F EM G + + F S+LS C++ +E G +
Sbjct: 603 LSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDS 662
Query: 432 LVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++K G A ++ + + G EA +E+ V W +++A HG
Sbjct: 663 MIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHG 719
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/736 (35%), Positives = 409/736 (55%), Gaps = 26/736 (3%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--PQRDLV 124
I+ + G A VF + + V Y+ M+ GY N L A F +M + LV
Sbjct: 85 VISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLV 144
Query: 125 --SWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIFD 178
+ ++ N L R + ++ + ++ ++S YA+ D A ++F+
Sbjct: 145 VGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFE 204
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGD 234
RM K+ +SW L+A Y QNG + A L E+ + V+ S++ K L
Sbjct: 205 RMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRI 264
Query: 235 AKWIFD---RMPVRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
+ I R V+ N ++ Y + A+ +F+ K V +W M+ G Q
Sbjct: 265 GRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQ 324
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYV-------QTKRMDMARELFEAMTC-KNVAS 342
NG+ +EA F M ++ V + G + +R +L + + NV+
Sbjct: 325 NGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSV 384
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N++I+ Y++ + A ++F+ + + + ++W A+I GYAQ+G +++L LF M+ G
Sbjct: 385 MNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGI 443
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+L+ V++ A+ + K +HG V+ + FV AL+ MY KCG+++ A
Sbjct: 444 KLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARK 503
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ + ++ VI+WN MI GY HG GK+ L LF M+ +KP+DIT + ++SACSH+G
Sbjct: 504 LFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGF 563
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
VE+G F SM DY + P HY+ MVDLLGRAG+LD+A N ++ MP +P + GA+L
Sbjct: 564 VEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAML 623
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
GAC+++ EL EKAA+ +F+++P+ G +VLL+N+YA++ W V+KVR M D+G+ K
Sbjct: 624 GACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHK 683
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G SW+E++N++HTF G T HPE +IYA+LE L ++K G+V + HDV E+
Sbjct: 684 TPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDV 742
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
K+ +L HSE+LA+A+G+L+ G + + KNLRVC DCH+ K+IS + GR II+RD
Sbjct: 743 KKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLR 802
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF GSCSCGDYW
Sbjct: 803 RFHHFKNGSCSCGDYW 818
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 166/340 (48%), Gaps = 42/340 (12%)
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC---- 337
T ++S + + G EA +F+ + K V ++ M+ GY + + A F M C
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142
Query: 338 -----------------------------------KNVASWNTMITGYAQSGEITHARNL 362
N+ +++ YA+ +I +A +
Sbjct: 143 LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKM 202
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F+RM D +SW ++AGYAQ+G+++ +L+L ++M+ G++ + S+L A++ +L
Sbjct: 203 FERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKAL 262
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+G+ +HG + GFE+ V NALL MY KCGS A F+ + K V+SWNTMI G
Sbjct: 263 RIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGC 322
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A++G ++A F M G P +TM+G+L AC++ G +E+G + + + + N
Sbjct: 323 AQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW-FVHKLLDKLKLDSN 381
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
++ + + R+D A ++ N+ E TW A++
Sbjct: 382 VSVMNSLISMYSKCKRVDIAASIFNNL--EKTNVTWNAMI 419
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 147/342 (42%), Gaps = 28/342 (8%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + G A VF M ++ VS+N MI G NG+ + A F +M V
Sbjct: 285 NALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEV 344
Query: 125 SWNVMISGYV--------RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
V + G + + + L ++ +V N+++S Y++ D A I
Sbjct: 345 PTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASI 404
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRL 232
F+ LEK ++WN ++ Y QNG ++EA CM+ + + ++
Sbjct: 405 FNN-LEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVN 463
Query: 233 GDAKWIFDRMPVRDEVSWNTMITG-----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
AKWI + VR + N ++ YA+ + A++LF+ + V TW AM+ G
Sbjct: 464 RQAKWIHG-LAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDG 522
Query: 288 YVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----- 338
Y +G E +F+ M + N +++ ++I+ + ++ LF++M
Sbjct: 523 YGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEP 582
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ ++ M+ ++G++ A N MP IS + G
Sbjct: 583 TMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLG 624
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 114/293 (38%), Gaps = 77/293 (26%)
Query: 64 WNVAITTHMRNGCCDSALHVF----------------------------------NSMPR 89
WN I + +NGC AL++F + +
Sbjct: 415 WNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAV 474
Query: 90 RSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
R+ + N +S L++ G + AR++FD M +R +++WN MI GY + +
Sbjct: 475 RACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLD 534
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
LF M K V + N+I++ +++A +G +EE
Sbjct: 535 LFNEMQKGAV---------------------------KPNDITFLSVISACSHSGFVEEG 567
Query: 205 CMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA- 258
+LF+S + +++++ + +L DA MP++ +S + G
Sbjct: 568 LLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACK 627
Query: 259 --QNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+N L E AQ+LF+ P + + + + Y N D+ + AM +K
Sbjct: 628 IHKNVELGEKAAQKLFKLDPDEGGYH-VLLANIYASNSMWDKVAKVRTAMEDK 679
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 8/201 (3%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R P +L C + L Q+ ++K GF ++ ++CK GS EA F
Sbjct: 46 HRHPSVVLLENCTSKKEL---YQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVF 102
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E + K + ++ M+ GYA++ DAL F M ++ +L C ++
Sbjct: 103 EHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLK 162
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
KG E + + G N T ++ L + ++D A + + M D +W L+
Sbjct: 163 KGRE-IHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQ-HKDLVSWTTLVAG 220
Query: 585 CRLYGKTELAEKAAEVIFEME 605
Y + A++A +++ +M+
Sbjct: 221 ---YAQNGHAKRALQLVLQMQ 238
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 263/716 (36%), Positives = 399/716 (55%), Gaps = 63/716 (8%)
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG-----YAQNGYADAARRIF 177
L S+ ++ + NK L ++L + K ++ +T LS Y++ A F
Sbjct: 8 LQSFRQILKSCIANKDLLTGKSLHTIYLK-SLIPSSTYLSNHFILLYSKCNLLTTAHHAF 66
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
++ E N S+N L+AAY + I A LF+ ++VS+N+L+ + + A
Sbjct: 67 NQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALS 126
Query: 238 IFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYV 289
+F M V D +++ +IT A N++ ++L F V ++++ Y
Sbjct: 127 LFGEMREMGLVMDGFTFSGVIT--ACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYS 184
Query: 290 QNGKVDEARMIFDAMPE--KNTVSWNAMIAGYVQTKR--------MDMARELFE------ 333
+NG ++EA M+F+ M E ++ VSWN+MI Y Q KR DM FE
Sbjct: 185 KNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTL 244
Query: 334 -----AMTC--------------------KNVASWNTMITGYAQSGE-ITHARNLFDRMP 367
+C KN + +I YA+ G ++ +R +F+ +
Sbjct: 245 ASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEIC 304
Query: 368 QHDCISWAAIIAGYAQSG-YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D + W +I+GY+Q+ S ++L F +M+R G + F +S C+NL+S GK
Sbjct: 305 GSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGK 364
Query: 427 QLHGQLVKVGFEAGCF-VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
Q H +K + V NAL+ MY KCG++++A F+ + + ++ N++IAGYA+H
Sbjct: 365 QFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQH 424
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G G ++L LFE M I P IT+V ILSAC+HTG VE+G +YF M +G+ P ++H
Sbjct: 425 GIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEH 484
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y+CM+DLLGRAG+L EA+ L+ MPF P +A W ALLGACR YG ELAEKAA ++E
Sbjct: 485 YSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLE 544
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
P NA Y++L+++Y+A+ +W + +++R MRDRG++K G SW+E+ +VH F D H
Sbjct: 545 PTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSH 604
Query: 666 PEKDRIYAYLEELEFKLKQDGFVYSTKLVL---HDVGEEEKEHMLRYHSEKLAVAYGILS 722
P I+ YL+E+ K+K+ G+V + + GE+EKE ML +HSEKLAVA+G+L
Sbjct: 605 PRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLF 664
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G P+ V+KNLR+C DCHNAIK +S I R I +RD RFH F G CSCGDYW
Sbjct: 665 TKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 220/506 (43%), Gaps = 87/506 (17%)
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAK-----WIFDRMPVRDEVSWNTMITGYAQNNYLA 264
++ +W + S+ ++ + K L K ++ +P +S N I Y++ N L
Sbjct: 2 TQFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLS-NHFILLYSKCNLLT 60
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
A F + +VF++ A+++ Y + + A +FD +P+ + VS+N +I Y
Sbjct: 61 TAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD 120
Query: 325 MDMARELFEAM-----------------TCKN--------------------VASWNTMI 347
A LF M C N V+ N+++
Sbjct: 121 TLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLL 180
Query: 348 TGYAQSGEITHARNLFDRMPQH--DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
T Y+++G + A +F+ M + D +SW ++I Y Q +L L+ +M G ++
Sbjct: 181 TYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEID 240
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS-VEEAYHAF 464
SVL+T + + L G Q H + +K GF VG+ L+ MY KCG+ + E+ F
Sbjct: 241 MFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVF 300
Query: 465 EEIVDKDVISWNTMIAGYARHG-FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
EEI D++ WNTMI+GY+++ +AL F M+ G PDD + V +SACS+
Sbjct: 301 EEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSP 360
Query: 524 EKGTEYFYSMNRDYGVIPNSKHY-TCMVDLLGRAGRLDEAQNLMKNMP------------ 570
+G + F+++ + N +V + + G L +A+ L + MP
Sbjct: 361 SQGKQ-FHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIA 419
Query: 571 --------------FE--------PDAATWGALLGACRLYGKTELAEKAAEV---IFEME 605
FE P + T ++L AC G+ E +K + IF +E
Sbjct: 420 GYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIE 479
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKV 631
PE A Y + +L +G+ + ++
Sbjct: 480 PE-AEHYSCMIDLLGRAGKLSEAERL 504
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 117/558 (20%), Positives = 216/558 (38%), Gaps = 154/558 (27%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNV 66
RQ+ SCI ++ + L + + PS L H
Sbjct: 11 FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHF--------------------- 49
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
I + + +A H FN + S+NA+I+ Y + A +FDQ+PQ DLVS+
Sbjct: 50 -ILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSF 108
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVV------------------------------- 155
N +I+ Y +A +LF M + +V
Sbjct: 109 NTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSG 168
Query: 156 ------SWNTMLSGYAQNGYADAARRIFDRMLE--KNEISWNGLLAAYVQNGRIEEACML 207
N++L+ Y++NG + A +F+ M E ++E+SWN ++ AY Q+ R +A L
Sbjct: 169 FDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALAL 228
Query: 208 FESKAN--WEVVSWN-----------------------SLMGGFVKQKRLG--------- 233
+ + +E+ + ++ GF K + +G
Sbjct: 229 YRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAK 288
Query: 234 ------DAKWIFDRMPVRDEVSWNTMITGYAQNNYLA-EAQRLF---------------- 270
+++ +F+ + D V WNTMI+GY+QN L+ EA F
Sbjct: 289 CGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFV 348
Query: 271 ------------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
E P + A+V+ Y + G + +AR +F MP+
Sbjct: 349 CAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQ 408
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN----TMITGYAQSGEITHARNL 362
NTV+ N++IAGY Q + LFE M ++A + ++++ A +G + +
Sbjct: 409 HNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKY 468
Query: 363 FDRMP-----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
F+ M + + ++ +I ++G ++ RL M + + ++L C
Sbjct: 469 FNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPF---SPGSAAWAALLGACR 525
Query: 418 NLASLELGKQLHGQLVKV 435
++EL ++ Q +++
Sbjct: 526 KYGNMELAEKAANQFLQL 543
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 269/758 (35%), Positives = 417/758 (55%), Gaps = 46/758 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + ++ R+G D A ++ + R++V+ N +I+G + + A ++F M
Sbjct: 312 DLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF--MG 369
Query: 120 QRDLVSWNV-----MISGYVR----NKSLSAARNLFEMMPK-----RDVVSWNTMLSGYA 165
RD + NV ++S + L R + + + R + N +++ YA
Sbjct: 370 ARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYA 429
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESK---ANWEVVS 218
+ G D A R+F M ++ ISWN ++ A QNG E A C++ ++ +N+ +S
Sbjct: 430 KCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAIS 489
Query: 219 WNSLMGGF----VKQKRLGDA-KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
S G Q+ DA KW D N ++ Y + ++E +F
Sbjct: 490 GLSSCAGLGLLAAGQQLHCDAVKWGL----YLDTSVSNALVKMYGECGRMSECWEIFNSM 545
Query: 274 PVKDVFTWTAMVSGYVQN-GKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMA 328
DV +W +++ + + E+ +F M + N V++ +A +++
Sbjct: 546 SAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELG 605
Query: 329 RELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQ 383
+++ M V A N +++ YA+SG++ LF RM + D ISW ++I+GY
Sbjct: 606 KQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIY 665
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G+ ++++ M + ++ F+ VL+ CA++A+LE G ++H ++ E+ V
Sbjct: 666 NGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVV 725
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
+AL+ MY KCG ++ A F + K+ SWN+MI+GYARHG G+ AL +FE M+ G
Sbjct: 726 ESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGE 785
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
PD +T V +LSACSH GLVE+G +YF M DYG++P +HY+C++DLLGRAG LD+ Q
Sbjct: 786 SPDHVTFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEHYSCVIDLLGRAGELDKIQ 844
Query: 564 NLMKNMPFEPDAATWGALLGAC---RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
MK MP +P+ W +L AC + K +L +A+ ++ E+EP+N YVL S +A
Sbjct: 845 EYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHA 904
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
A GRW D +K R M+ VKK G SW+ + + VHTF GD HP IY L L
Sbjct: 905 AIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQ 964
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
K++ G+V T+ VLHD+ EE KE +LRYHSEKLAVA+ + +G PIR+MKNLRVC D
Sbjct: 965 KIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGD 1024
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH A ++IS+IVGR IILRD+ RFHHF G CSCGDYW
Sbjct: 1025 CHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 153/613 (24%), Positives = 275/613 (44%), Gaps = 96/613 (15%)
Query: 51 NKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN----- 105
++P P D +R R CD++ + + ++++ ++ +L+N
Sbjct: 63 SRPHPHADVLLRG---------RRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKG 113
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR------DVVSWNT 159
+LD AR+VFD MP R+ VSW +ISG+V + A LF M + ++ +
Sbjct: 114 ARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGS 173
Query: 160 ML-----SGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAY--VQNGRIEEACMLFESK 211
+L SG + G+A + + N N L++ Y G A +F++
Sbjct: 174 VLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTT 233
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKW---IFDRMPVRD--------EVSWNTMITG-YAQ 259
++++WN+LM + K+ GDA +F M D E ++ ++IT Y
Sbjct: 234 PVRDLITWNALMSVYAKR---GDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLS 290
Query: 260 NNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
+ L +LF + D++ +A+VS + ++G +DEA+ I+ + E+N V+ N +
Sbjct: 291 SCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGL 350
Query: 316 IAGYVQTKRMDMARELF----------------------EAMTC---------------- 337
IAG V+ + + A E+F E T
Sbjct: 351 IAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLR 410
Query: 338 -----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+ +A N ++ YA+ G I A +F M D ISW II Q+GY E ++
Sbjct: 411 AGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMM 470
Query: 393 LFIEMKRYGERLNRSPFTSV--LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
+ M++ + S F ++ LS+CA L L G+QLH VK G V NAL+ M
Sbjct: 471 NYCLMRQ--NSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKM 528
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA-RHGFGKDALMLFESMKTVGIKPDDIT 509
Y +CG + E + F + DV+SWN+++ A +++ +F +M G+ P+ +T
Sbjct: 529 YGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVT 588
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
V L+A + ++E G + +S+ +GV ++ ++ ++G +D + L M
Sbjct: 589 FVNFLAALTPLSVLELGKQ-IHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRM 647
Query: 570 PFEPDAATWGALL 582
DA +W +++
Sbjct: 648 SGRRDAISWNSMI 660
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 27/290 (9%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N ++ YA+ + AR +FD MP + +SW +I+G+ SG ED+ LF M R G
Sbjct: 104 NHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPG 163
Query: 404 LNRSPFT--SVLSTCANLASLELG--KQLHGQLVKVGFEAGCFVGNALLVMY--CKCGSV 457
+ FT SVL C + LG Q+HG + K F + V NAL+ MY C G
Sbjct: 164 CRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPP 223
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK----TVGIKPDDITMVGI 513
A F+ +D+I+WN +++ YA+ G LF +M+ + ++P + T +
Sbjct: 224 ILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSL 283
Query: 514 -----LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
LS+CS GL+++ + G + + +V R G LDEA+++
Sbjct: 284 ITATYLSSCS-LGLLDQ----LFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLG 338
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIF---EMEPENAGMYVLL 615
+ E +A T L+ K + E AAE+ + N YV+L
Sbjct: 339 LK-ERNAVTLNGLIAG---LVKQQHGEAAAEIFMGARDSAAVNVDTYVVL 384
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/594 (40%), Positives = 344/594 (57%), Gaps = 46/594 (7%)
Query: 229 QKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFT 280
++ L A + D M R D ++++ +I + + E +R +F F
Sbjct: 263 RRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFL 322
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----- 335
+++ YV+ ++EA+++FD MPE+N VSW MI+ Y + D A L M
Sbjct: 323 TNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGV 382
Query: 336 ------------TC------KNVASW-------------NTMITGYAQSGEITHARNLFD 364
C K + SW + +I Y++ GE+ A +F
Sbjct: 383 MPNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFR 442
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
M D + W +IIA +AQ +++L L+ M+R G ++S TSVL C +L+ LEL
Sbjct: 443 EMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLEL 502
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G+Q H ++K F+ + NALL MYCKCGS+E+A F + KDVISW+TMIAG A+
Sbjct: 503 GRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ 560
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
+GF +AL LFESMK G KP+ IT++G+L ACSH GLV +G YF SMN YG+ P +
Sbjct: 561 NGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGRE 620
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CM+DLLGRA +LD+ L+ M EPD TW LL ACR +LA AA+ I ++
Sbjct: 621 HYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKL 680
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
+P++ G YVLLSN+YA S RW DV++VR M+ RG++K G SW+EV ++H F +GD
Sbjct: 681 DPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKS 740
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
HP+ D I L + +L G+V T VL D+ E++E LRYHSEKLA+ +GI+S P
Sbjct: 741 HPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFP 800
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ IR+ KNL++C DCH K I+++ R I++RD R+HHF G CSCGDYW
Sbjct: 801 KEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 192/427 (44%), Gaps = 47/427 (11%)
Query: 79 SALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPA----RQVFDQMPQRDLVSWNVMI 130
SA+HV +SM RR S++Y+ +I L +G + R +F N++I
Sbjct: 268 SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILI 327
Query: 131 SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
+ YV+ L A+ LF+ MP+R+VVSW TM+S Y+ D A R+ M +G
Sbjct: 328 NMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFR------DG 381
Query: 191 LLAAYVQNGRIEEAC-MLFESKA--NW--------EVVSWNSLMGGFVKQKRLGDAKWIF 239
++ + AC L++ K +W +V ++L+ + K L +A +F
Sbjct: 382 VMPNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVF 441
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVD 295
M D V WN++I +AQ++ EA L++ D T T+++ ++
Sbjct: 442 REMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLE 501
Query: 296 EARM--IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
R + +++ + NA++ Y + ++ A+ +F M K+V SW+TMI G AQ+
Sbjct: 502 LGRQAHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQN 561
Query: 354 GEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YGERLNRSP 408
G A NLF+ M P+ + I+ ++ + +G + F M YG R
Sbjct: 562 GFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREH 621
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGC---FVGNALLVMYCKC-GSVEEAYHAF 464
+ +L L+ +VK+ E C V L+ C+ +V+ A +A
Sbjct: 622 YGCMLDLLGRAEKLD-------DMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAA 674
Query: 465 EEIVDKD 471
+EI+ D
Sbjct: 675 KEILKLD 681
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 185/448 (41%), Gaps = 88/448 (19%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY-------- 133
H+F++ + N +I+ Y+ L+ A+ +FD+MP+R++VSW MIS Y
Sbjct: 310 HIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDR 369
Query: 134 ------------------VRNKSLSAARNLFEMMP----------KRDVVSWNTMLSGYA 165
+ L A L+++ + DV + ++ Y+
Sbjct: 370 AMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYS 429
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--------------- 210
+ G A ++F M+ + + WN ++AA+ Q+ +EA L++S
Sbjct: 430 KMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTS 489
Query: 211 ----------------------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
K + +++ N+L+ + K L DAK+IF+RM +D +
Sbjct: 490 VLRACTSLSLLELGRQAHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVI 549
Query: 249 SWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
SW+TMI G AQN + EA LFE + P + T ++ G V+E F +M
Sbjct: 550 SWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSM 609
Query: 305 PEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEI-- 356
+ + M+ + +++D +L M C+ +V +W T++ +
Sbjct: 610 NNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDL 669
Query: 357 -THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
T+A ++ D ++ + YA S D + MK+ G R + P S +
Sbjct: 670 ATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIR--KEPGCSWIEV 727
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFV 443
+ + LG + H Q+ ++ + F+
Sbjct: 728 NKQIHAFILGDKSHPQIDEINRQLNQFI 755
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN----GQLDPARQV----- 114
WN I ++ D ALH++ SM R + + ++ L L+ RQ
Sbjct: 452 WNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL 511
Query: 115 -FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
FDQ DL+ N ++ Y + SL A+ +F M K+DV+SW+TM++G AQNG++ A
Sbjct: 512 KFDQ----DLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEA 567
Query: 174 RRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMG 224
+F+ M + N I+ G+L A G + E F S N + + ++
Sbjct: 568 LNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLD 627
Query: 225 GFVKQKRLGD-AKWIFDRMPVRDEVSWNTMI 254
+ ++L D K I + D V+W T++
Sbjct: 628 LLGRAEKLDDMVKLIHEMNCEPDVVTWRTLL 658
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 285/838 (34%), Positives = 433/838 (51%), Gaps = 115/838 (13%)
Query: 52 KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR-----SSVSYNAMISGYLLN- 105
K +P+ I + I H+ G A+ + M R SV++++++ +
Sbjct: 17 KSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRAR 76
Query: 106 ----GQLDPARQV-FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM---PKRDVVSW 157
G+L AR + FD P D V +N +IS Y ++ + A ++FE M KRDVVSW
Sbjct: 77 DFRLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSW 134
Query: 158 NTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAA-----YVQNGRIEEACMLF 208
+ M++ Y NG A ++F LE N+ + ++ A +V GR+ ++
Sbjct: 135 SAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMK 194
Query: 209 ESKANWEVVSWNSLMGGFVK-QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+V SL+ FVK + +A +FD+M + V+W MIT Q + EA
Sbjct: 195 TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAI 254
Query: 268 RLFEEAPVK----DVFTWTAMVSGYVQ--------------------------------- 290
R F + + D FT +++ S +
Sbjct: 255 RFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAK 314
Query: 291 ---NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE---LFEAM--------- 335
+G VD+ R +FD M + + +SW A+I GY+ K ++A E LF M
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYM--KNCNLATEAINLFSEMITQGHVEPN 372
Query: 336 ---------TCKNVAS----------------------WNTMITGYAQSGEITHARNLFD 364
C N++ N++I+ + +S + A+ F+
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+ + + +S+ + G ++ E + +L E+ ++ F S+LS AN+ S+
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G+Q+H Q+VK+G V NAL+ MY KCGS++ A F + +++VISW +MI G+A+
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAK 552
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HGF L F M G+KP+++T V ILSACSH GLV +G +F SM D+ + P +
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CMVDLL RAG L +A + MPF+ D W LGACR++ TEL + AA I E+
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
+P Y+ LSN+YA +G+W + +++R KM++R + K G SW+EV +K+H F VGDT
Sbjct: 673 DPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTA 732
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV----GEEEKEHMLRYHSEKLAVAYGI 720
HP +IY L+ L ++K+ G+V T LVLH + E EKE +L HSEK+AVA+G+
Sbjct: 733 HPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGL 792
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S RP+RV KNLRVC DCHNA+K+IS + GR I+LRD NRFHHF G CSC DYW
Sbjct: 793 ISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/687 (37%), Positives = 388/687 (56%), Gaps = 39/687 (5%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G A+Q+FD +PQ D + + +IS + + A L+ + R + N++ A
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139
Query: 166 Q----NGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFESKANWEVV 217
+ +G A + + D + +S N L+ AY + +E A +F+ +VV
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199
Query: 218 SWNSLMGGFVK--QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
SW S+ +V RLG + V E+ WN + + N + + L + +
Sbjct: 200 SWTSMSSCYVNCGLPRLG--------LAVFCEMGWNGV-----KPNSVTLSSILPACSEL 246
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
KD+ + A+ V++G ++ N +A+++ Y + + AR +F+ M
Sbjct: 247 KDLKSGRAIHGFAVRHGMIE------------NVFVCSALVSLYARCLSVKQARLVFDLM 294
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSL 391
++V SWN ++T Y + E LF +M + D +W A+I G ++G +E ++
Sbjct: 295 PHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAV 354
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+ +M+ G + N+ +S L C+ L SL +GK++H + + AL+ MY
Sbjct: 355 EMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMY 414
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG + + + F+ I KDV++WNTMI A HG G++ L+LFESM GIKP+ +T
Sbjct: 415 AKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFT 474
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+LS CSH+ LVE+G + F SM RD+ V P++ HY CMVD+ RAGRL EA ++ MP
Sbjct: 475 GVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPM 534
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
EP A+ WGALLGACR+Y ELA+ +A +FE+EP N G YV L N+ + W + S+
Sbjct: 535 EPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEA 594
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R+ M++RG+ K G SWL+V ++VHTF VGD + E D+IY +L+EL K+K G+ T
Sbjct: 595 RILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDT 654
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
VL D+ +EEK L HSEKLAVA+GIL++ IRV KNLR+C DCHNAIK++SK+
Sbjct: 655 DYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKV 714
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
VG II+RD+ RFHHF G+CSC D W
Sbjct: 715 VGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 136/603 (22%), Positives = 246/603 (40%), Gaps = 92/603 (15%)
Query: 11 HSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKS--------RNKPKPAGDWDIR 62
SS I Q T + P N + + LK LN N P+P D
Sbjct: 43 QSSSIWKQLTSTKVAPSVPTNIPSHLGLRLLKAALNVGDFRRAQQLFDNIPQP----DPT 98
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMI----SGYLLNGQLDPARQVFDQM 118
+ I+ G + A+ ++ S+ R +N++ +G ++V D
Sbjct: 99 TCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDA 158
Query: 119 PQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+ ++S N +I Y + K + AR +F+ + +DVVSW +M S Y G
Sbjct: 159 IRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGL 218
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE--------------VVSWN 220
+F E+ WNG+ V I AC + + V +
Sbjct: 219 AVF------CEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCS 272
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---- 276
+L+ + + + A+ +FD MP RD VSWN ++T Y N + LF + K
Sbjct: 273 ALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEA 332
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE-- 330
D TW A++ G ++NG+ ++A + M + N ++ ++ + + + M +E
Sbjct: 333 DEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVH 392
Query: 331 --LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+F ++ + ++ YA+ G++ +RN+FD + + D ++W +I A G
Sbjct: 393 CYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGR 452
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ L LF M + G + N FT VLS C+ H +LV+ G + +G
Sbjct: 453 EVLLLFESMLQSGIKPNSVTFTGVLSGCS-----------HSRLVEEGLQIFNSMGR--- 498
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
+ +V+ D + M+ ++R G +A +E ++ + ++P
Sbjct: 499 ----------------DHLVEPDANHYACMVDVFSRAGRLHEA---YEFIQRMPMEPTAS 539
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK-HYTCMVDLLGRA---GRLDEAQN 564
+L AC VE S N+ + + PN+ +Y + ++L A EA+
Sbjct: 540 AWGALLGACRVYKNVELAK---ISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARI 596
Query: 565 LMK 567
LMK
Sbjct: 597 LMK 599
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/673 (38%), Positives = 377/673 (56%), Gaps = 83/673 (12%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N + Y + GR+ A F+ ++ V S+N+++ + K+ R A +FD++P D V
Sbjct: 47 NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV 106
Query: 249 SWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSG----------------- 287
S+NT+I+ YA A A LF E D FT +A+++
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVS 166
Query: 288 ----------------YVQNGKVDEARMIFDAMPE-KNTVSWNAMIAGYVQTKRMDMARE 330
Y +NG +D+A+ +F M ++ VSWN+MI Y Q + A
Sbjct: 167 SGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALG 226
Query: 331 LFEAM----------TCKNVASWNTMI---------------TGYAQS------------ 353
LF+ M T +V + T + TG+ Q+
Sbjct: 227 LFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYS 286
Query: 354 ---GEITHARNLFDRMPQHDCISWAAIIAGYAQSG-YSEDSLRLFIEMKRYGERLNRSPF 409
G ++ R +F+ + + D + W +++GY+Q+ + ED+L F +M+ G R N F
Sbjct: 287 KCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSF 346
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIV 468
V+S C+NL+S GKQ+H +K + V NAL+ MY KCG++++A F+ +
Sbjct: 347 VCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA 406
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ + +S N+MIAGYA+HG ++L LF+ M I P IT + +LSAC+HTG VE+G
Sbjct: 407 EHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWN 466
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF M + + P ++HY+CM+DLLGRAG+L EA+NL+ MPF P + W +LLGACR +
Sbjct: 467 YFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTH 526
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
G ELA KAA + ++EP NA YV+LSN+YA++GRW +V+ VR MRDRGVKK G SW
Sbjct: 527 GNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSW 586
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL-HDVGEE--EKEH 705
+EV+ ++H F D+ HP IY +LEE+ K+K+ G+V + L D G EKE
Sbjct: 587 IEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEI 646
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L +HSEKLAVA+G++S G P+ V+KNLR+C DCHNAIK IS I GR I +RD +RFH
Sbjct: 647 RLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFH 706
Query: 766 HFSGGSCSCGDYW 778
F G CSCGDYW
Sbjct: 707 CFKEGQCSCGDYW 719
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 147/585 (25%), Positives = 238/585 (40%), Gaps = 138/585 (23%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
+L++ + +P + S N I Y G+L AR+ F + ++ S+N +I+ Y +
Sbjct: 32 SLYIKSFIPPSTYFS-NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRP 90
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
A LF+ +P+ D+VS+NT++S YA G A +F M E + +G + V
Sbjct: 91 LIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMG-LDMDGFTLSAVITA 149
Query: 200 RIEEACML-------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-PVRDEVSWN 251
++ ++ S + V N+L+ + K L DAK +F M +RDEVSWN
Sbjct: 150 CCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWN 209
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMV---------------------S 286
+MI Y Q+ ++A LF+E + D+FT +++ +
Sbjct: 210 SMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKT 269
Query: 287 GYVQN---------------GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR-MDMARE 330
G+ QN G + + R +F+ + E + V WN M++GY Q + ++ A E
Sbjct: 270 GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALE 329
Query: 331 LFEAM-----------------TCKNVASW-----------------------NTMITGY 350
F M C N++S N +I Y
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMY 389
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
++ G + AR LFDRM +H+ +S ++IAGYAQ G +SL LF M F
Sbjct: 390 SKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFI 449
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
SVLS CA+ G VEE ++ F + +K
Sbjct: 450 SVLSACAHT-----------------------------------GRVEEGWNYFNMMKEK 474
Query: 471 DVIS-----WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
I ++ MI R G +A L M P I +L AC G +E
Sbjct: 475 FNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGACRTHGNIEL 531
Query: 526 GTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ + N+ + P N+ Y + ++ AGR +E + K M
Sbjct: 532 AVK---AANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFM 573
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 126/540 (23%), Positives = 221/540 (40%), Gaps = 84/540 (15%)
Query: 5 NRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRH---LNSK------SRNKPKP 55
R R L +CI + + L S + P H L SK +R +
Sbjct: 9 QRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQD 68
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
D ++ +N I + + A +F+ +P VSYN +IS Y G+ PA +F
Sbjct: 69 ISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLF 128
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRD--VVSWNTMLSGYAQNGY 169
M + L + + +I+ + L + + D V N +L+ Y +NG
Sbjct: 129 SGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 170 ADAARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVSWNSLM- 223
D A+R+F M ++E+SWN ++ AY Q+ +A LF+ N ++ + S++
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 224 --------------------GGFVKQKRLG---------------DAKWIFDRMPVRDEV 248
GF + +G D + +F+ + D V
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 249 SWNTMITGYAQN-NYLAEAQRLFEE----------APVKDVFTWTAMVSGYVQNGKVDEA 297
WNTM++GY+QN +L +A F + V + + +S Q ++
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ D +P NA+IA Y + + AR LF+ M N S N+MI GYAQ G
Sbjct: 369 ALKSD-IPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEM 427
Query: 358 HARNLF----DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP----F 409
+ +LF +R I++ ++++ A +G E+ F MK E+ N P +
Sbjct: 428 ESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMK---EKFNIEPEAEHY 484
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC-GSVEEAYHAFEEIV 468
+ ++ L + L + ++ F G +G A L+ C+ G++E A A +++
Sbjct: 485 SCMIDLLGRAGKLSEAENL---IARMPFNPGS-IGWASLLGACRTHGNIELAVKAANQVL 540
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 57/254 (22%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F +L TC L GK LH +K + N +++Y KCG + A AF++I
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 469 D-------------------------------KDVISWNTMIAGYARHGFGKDALMLFES 497
D D++S+NT+I+ YA G AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 498 MKTVGIKPDDITMVGILSACS---------HTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
M+ +G+ D T+ +++AC H+ V G + + S+N
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN------------NA 178
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM--EP 606
++ G+ G LD+A+ + M D +W +++ A YG+ + KA + EM
Sbjct: 179 LLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVA---YGQHQEGSKALGLFQEMVRRG 235
Query: 607 ENAGMYVLLSNLYA 620
N M+ L S L A
Sbjct: 236 LNVDMFTLASVLTA 249
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/660 (37%), Positives = 377/660 (57%), Gaps = 19/660 (2%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV- 196
+L ARNLF+ +P+ ++ +WNT++ YA + + IF +L+K E N +V
Sbjct: 74 TLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVI 133
Query: 197 ------QNGRIEEAC--MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
+ R+ A M + ++ NSL+ + L A+ +F + +D V
Sbjct: 134 KAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVV 193
Query: 249 SWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
SWN+MI+ +AQ N +A LF E + + T ++S + ++ R + +
Sbjct: 194 SWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYI 253
Query: 305 PEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
K + NAM+ Y + +D A++LF+ M ++V SW M+ GYA+ G+ AR
Sbjct: 254 ERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAAR 313
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG-ERLNRSPFTSVLSTCANL 419
+F+ MP + +W +I+ Y Q+G +++L +F E++ + + S LS CA L
Sbjct: 314 LVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQL 373
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+++LG +H + + G C + ++L+ MY KCGS+E+A F + ++DV W+ MI
Sbjct: 374 GAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMI 433
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
AG HG GK A+ LF M+ +KP+ +T +L ACSH GLV++G +F+ M YGV
Sbjct: 434 AGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGV 493
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P KHY CMVD+LGRAG L+EA L+ M P A+ WGALLGAC L+ EL E A++
Sbjct: 494 VPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASD 553
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ ++EP N G VLLSN+YA +GRW VS++R MRD +KK G S +E VH F
Sbjct: 554 QLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFL 613
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE-KEHMLRYHSEKLAVAY 718
VGD HP IY+ LEE+ KLK G+ + +L + E++ KE L HSEKLA+A+
Sbjct: 614 VGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAF 673
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G++++ +PIRV+KNLR+C DCH K +S++ R I+LRD RFHHF G CSC DYW
Sbjct: 674 GLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 183/399 (45%), Gaps = 54/399 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDPARQVF 115
D+ WN I+ + C + AL +F M R + SV+ ++S L+ R V
Sbjct: 191 DVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVC 250
Query: 116 DQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ ++ DL N M+ Y + S+ A+ LF+ MP+RDV SW ML GYA+ G D
Sbjct: 251 SYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYD 310
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SK-ANWEVVSWNSLMGGF 226
AAR +F+ M K +WN L++AY QNG+ +EA +F SK A + V+ S +
Sbjct: 311 AARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSAC 370
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
+ + WI + R+ + N +++ YA+ L +A +F +DV+ W
Sbjct: 371 AQLGAIDLGGWIHVYIK-REGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVW 429
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
+AM++G +G+ A +D+ E+ EA N
Sbjct: 430 SAMIAGLGMHGRGKAA---------------------------IDLFFEMQEAKVKPNSV 462
Query: 342 SWNTMITGYAQSGEITHARNLFDRM-PQHDCIS----WAAIIAGYAQSGYSEDSLRLFIE 396
++ ++ + +G + R F M P + + +A ++ ++G+ E+++ L E
Sbjct: 463 TFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINE 522
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
M + S + ++L C+ ++ELG+ QL+K+
Sbjct: 523 MSTTP---SASVWGALLGACSLHMNVELGELASDQLLKL 558
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 266/768 (34%), Positives = 420/768 (54%), Gaps = 69/768 (8%)
Query: 74 NGCCDSALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ-RDLVSWNVMI 130
+G C S +H S RS++ NA++ Y G LD A +VF+ M RD+ SWN I
Sbjct: 178 DGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAI 237
Query: 131 SGYVRNKSLSAARNLFEMMPK--------------------------RDV---------- 154
SG V+N A +LF M R++
Sbjct: 238 SGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTE 297
Query: 155 --VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---- 208
+ N +L YA+ G+ D+A R+F + +K+ ISWN +L+ YVQN EA F
Sbjct: 298 FNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMV 357
Query: 209 ESKANWE---VVSWNSLMG--GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
++ N + +VS S +G G + R A + R+ +++ NT++ Y + +
Sbjct: 358 QNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIA-NTLMDMYIKCYSV 416
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
+ R+F+ +KD +WT +++ Y Q+ + EA F +K + + M+ G +
Sbjct: 417 ECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRT-AQKEGIKVDPMMMGSI--- 472
Query: 324 RMDMARELFEAMTCKNVASW------------NTMITGYAQSGEITHARNLFDRMPQHDC 371
++ L K V S+ N +I Y + GE+ +A N+F+ + + D
Sbjct: 473 -LEACSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDI 531
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
++W +++ +A++G +++ LF +M G + + +L A L+SL GK++HG
Sbjct: 532 VTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGF 591
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
L++ F V ++L+ MY CGS+ A F+E KDV+ W MI HG GK A
Sbjct: 592 LIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQA 651
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
+ +F+ M G+ PD ++ + +L ACSH+ LV++G Y M Y + P +HY C+VD
Sbjct: 652 IYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVD 711
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGR+G+ +EA +K+MP EP + W ALLGACR++ ELA A + + E+EP+N G
Sbjct: 712 LLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGN 771
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVL+SN++A G+W +V ++R KM ++G++K SW+E+ N VHTF+ D H + I
Sbjct: 772 YVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAI 831
Query: 672 YAYLEELEFKLKQDG-FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIR 730
+ L E+ KL+++G +V T VLHDV EEEK +L HSE+LA+++G++S +G P+R
Sbjct: 832 HLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLR 891
Query: 731 VMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ KNLRVC DCH K +SK+ R I++RD NRFHHFSGG+CSCGD+W
Sbjct: 892 IAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 142/579 (24%), Positives = 246/579 (42%), Gaps = 69/579 (11%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--------------- 150
G+L A ++FD MP R + SWN +I + + A ++ M
Sbjct: 107 GRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTL 166
Query: 151 ----------------------------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
R + N ++ YA+ G D+A R+F+ M +
Sbjct: 167 ASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRD 226
Query: 183 KNEI-SWNGLLAAYVQNGRIEEACMLFE-------SKANWEVVSWNSLMGGFVKQKRLGD 234
++ SWN ++ VQNG EA LF S ++ V + + +
Sbjct: 227 GRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRE 286
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
+ + N ++ YA+ ++ A R+F E KD +W +M+S YVQN
Sbjct: 287 LHAALLKCGTEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLY 346
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMARELFEAMTCKNVAS----WNTM 346
EA F M + +A I + R+ RE+ + + S NT+
Sbjct: 347 AEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTL 406
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+ Y + + + +FDRM D +SW IIA YAQS +++ F ++ G +++
Sbjct: 407 MDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDP 466
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S+L C+ L S+ L KQ+H ++ G + N ++ +Y +CG V A + FE
Sbjct: 467 MMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEM 525
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ KD+++W +M+ +A +G +A+ LF M GI+PD + +VGIL A + + KG
Sbjct: 526 LDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKG 585
Query: 527 TEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
E + R G P + +VD+ G ++ A + + D W A++ A
Sbjct: 586 KEIHGFLIR--GKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINAT 642
Query: 586 RLYGKTELAEKAAEVIFE--MEPENAGMYVLLSNLYAAS 622
++G + A + + E + P++ L LYA S
Sbjct: 643 GMHGHGKQAIYIFKRMLETGVSPDHVSFLAL---LYACS 678
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 149/338 (44%), Gaps = 57/338 (16%)
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
W+ D + VR VS + +A +A ++A F T ++ Y + G++ +
Sbjct: 60 WVLDLVAVRRAVSEGRQLHAHA----VATGALGDDDAG----FLATKLLFMYGKCGRLPD 111
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--------------------- 335
A +FD MP + SWNA+I + + A ++ AM
Sbjct: 112 AHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLK 171
Query: 336 TC----------------------KNVASWNTMITGYAQSGEITHARNLFDRMPQ-HDCI 372
C ++ N ++ YA+ G + A +F+ M D
Sbjct: 172 ACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVA 231
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
SW + I+G Q+G ++L LF M+ G +N VL CA LA L G++LH L
Sbjct: 232 SWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAAL 291
Query: 433 VKVG--FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+K G F C NALLVMY +CG V+ A F EI DKD ISWN+M++ Y ++ +
Sbjct: 292 LKCGTEFNIQC---NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAE 348
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
A+ F M G PD +V +LSA H G + G E
Sbjct: 349 AIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGRE 386
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 173/393 (44%), Gaps = 35/393 (8%)
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
Q N + + R G DSAL VF + + +S+N+M+S Y+ N A F +M Q
Sbjct: 301 QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNG 360
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQNGY 169
+ I LSA +L ++ R+V ++ NT++ Y +
Sbjct: 361 FNPDHACIVSL-----LSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYS 415
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
+ + R+FDRM K+ +SW ++A Y Q+ R EA F + A E + + +M G + +
Sbjct: 416 VECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRT-AQKEGIKVDPMMMGSILE 474
Query: 230 -----KRLGDAKWIFD---RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
K + K + R + D + N +I Y + + A +FE KD+ TW
Sbjct: 475 ACSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTW 534
Query: 282 TAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARE----LFE 333
T+MV+ + +NG + EA +F M + ++V+ ++ + +E L
Sbjct: 535 TSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR 594
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
A ++++ Y+ G + +A +FD D + W A+I G+ + ++ +
Sbjct: 595 GKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYI 654
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
F M G + F ++L C++ ++ GK
Sbjct: 655 FKRMLETGVSPDHVSFLALLYACSHSKLVDEGK 687
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGF----EAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
VL A ++ G+QLH V G +AG F+ LL MY KCG + +A+ F+ +
Sbjct: 61 VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAG-FLATKLLFMYGKCGRLPDAHRLFDGM 119
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMK----TVGIKPDDITMVGILSACSHTGLV 523
+ V SWN +I G +A+ ++ +M+ G PD T+ +L AC G
Sbjct: 120 PARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDG 179
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
G+E + + G+ ++ +V + + G LD A + + M D A+W + +
Sbjct: 180 RCGSE-VHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAIS 238
Query: 584 AC 585
C
Sbjct: 239 GC 240
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/655 (37%), Positives = 370/655 (56%), Gaps = 45/655 (6%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
PK + I W ++ + R+G D A +F+ MP R++VSYNA++SG L G+L A
Sbjct: 2 PKRSPLSRIVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAM 61
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
++F++MP+R++VSW M+ G + A++LFE MP R+VVSWN M+ G +NG +A
Sbjct: 62 KLFEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEA 121
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
AR +FD KN SWNG++A Y +NGR+EEA LF+ + V++W S++ G+ + +
Sbjct: 122 ARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEV 181
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-------APVKDVFTWTAMV 285
+ +F MP R+ VSW MI G+ N + +A LF E P + F A
Sbjct: 182 EEGYHLFRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYA 241
Query: 286 S---GYVQNGKVDEARMI--------FDAMPEKNTV------------------------ 310
G+ + GK AR+I +D K +
Sbjct: 242 CAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYV 301
Query: 311 --SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
S N MI GY++ +D A+ LF+ M ++ +W +MI GY G ++ A +LF MP+
Sbjct: 302 VQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPE 361
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D ++W +I+G+ ++ ++ LF EM G R S + + +ASL+ G+QL
Sbjct: 362 KDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQL 421
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H L K + + N+L+ MY KCG + AY F +++ D+ISWN+MI G++ HG
Sbjct: 422 HAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGLA 481
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+AL +FE+M G P+ +T +G+LSACSH GL+ +G E F +M+ + V P +HY C
Sbjct: 482 NEALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYIC 541
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK-TELAEKAAEVIFEMEPE 607
MV+LLGRAG+L EA+ L+ +P E + A WGALLG C K ++A++AA I E++P
Sbjct: 542 MVNLLGRAGKLKEAEELILGLPLERNHAIWGALLGVCSFSEKNADIAKRAATRILELDPL 601
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
NA +VLL N+YAASG+ + K+R +M +GVKKV G SW+ + +VH F GD
Sbjct: 602 NAPAHVLLCNIYAASGQHIEEHKLRKEMGLKGVKKVPGCSWIVLNGRVHVFLSGD 656
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 227/448 (50%), Gaps = 52/448 (11%)
Query: 149 MPKRD----VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
MPKR +V W ++LS Y+++G+ D AR +FD M E+N +S+N LL+ +Q GR+ EA
Sbjct: 1 MPKRSPLSRIVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEA 60
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
LFE VVSW S++ G ++ +AK +F+ MP R+ VSWN MI G +N L
Sbjct: 61 MKLFEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLE 120
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
A+ +F+E+PVK+ +W M++GY +NG+++EAR +FD M ++N ++W +M++GY +
Sbjct: 121 AARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGE 180
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
++ LF M +N+ SW MI G+ +W +
Sbjct: 181 VEEGYHLFRTMPKRNIVSWTAMIGGF----------------------TW---------N 209
Query: 385 GYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G+ ED+L LF+EMKR + N F S+ CA L LGKQLH +L+ G + +
Sbjct: 210 GFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYD 269
Query: 444 G---NALLVMYCKCGSVEEAYHAFEEIVDKDVI-SWNTMIAGYARHGFGKDALMLFESMK 499
G L+ MY G ++ A++ F + + V+ S N MI GY R G A LF++M
Sbjct: 270 GRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMP 329
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
D IT ++ G V + F M V +T M+ R
Sbjct: 330 V----RDKITWTSMIDGYLVIGNVSEACSLFLYMPEKDAVA-----WTTMISGHVRNELF 380
Query: 560 DEAQNLMKNMPFE---PDAATWGALLGA 584
EA L M + P ++T+ L GA
Sbjct: 381 AEATYLFSEMLTQGVRPLSSTYAILFGA 408
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 251/510 (49%), Gaps = 42/510 (8%)
Query: 118 MPQRD----LVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
MP+R +V W ++S Y R+ + AR LF++MP+R+ VS+N +LSG Q G A
Sbjct: 1 MPKRSPLSRIVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEA 60
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
++F+ M E+N +SW +L G+I EA LFE + VVSWN+++ G ++ L
Sbjct: 61 MKLFEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLE 120
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
A+ +FD PV++ SWN MI GYA+N + EA+ LF+E ++V TWT+MVSGY + G+
Sbjct: 121 AARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGE 180
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMI- 347
V+E +F MP++N VSW AMI G+ + A LF M N+ ++ ++
Sbjct: 181 VEEGYHLFRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAY 240
Query: 348 ----TGYAQSGEITHARNLFDRMPQ--HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
G+ + G+ HAR + + + +D +I Y+ G+ + + +F
Sbjct: 241 ACAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIF------- 293
Query: 402 ERLNRSPFTSVLSTCANLAS--LELGKQLHGQ-LVKVGFEAGCFVGNALLVMYCKCGSVE 458
N++ V+ +C + + + +G Q L +++ Y G+V
Sbjct: 294 ---NKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVS 350
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
EA F + +KD ++W TMI+G+ R+ +A LF M T G++P T + A
Sbjct: 351 EACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAG 410
Query: 519 HTGLVEKGTEYFYSMNRDYG----VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+++G + + + ++ NS ++ + + G + A + M D
Sbjct: 411 AVASLDQGRQLHAMLTKTLSDNDLILENS-----LISMYAKCGEIRNAYRIFSQM-ISHD 464
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEM 604
+W +++ +G LA +A EV M
Sbjct: 465 LISWNSMIMGFSHHG---LANEALEVFEAM 491
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/695 (36%), Positives = 391/695 (56%), Gaps = 58/695 (8%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR--IFDRM----LEKNEISWNGLL 192
L A +LF+ MP + ++T L ++ G +D R +F RM + + +++ L
Sbjct: 53 LRYALHLFDRMPPSTFL-FDTALRACSRAG-SDPHRPFLLFRRMRRAGVRPDGFTFHFLF 110
Query: 193 AAYVQNGR---------IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ R + AC+ + VS NSL+ +++ DA+ FD +
Sbjct: 111 KCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVS-NSLIHMYIRLGLAADARRAFDEIH 169
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
V+D V+W +I+G A+ L + Q L +APV+DV +WT++++ Y + + EA F
Sbjct: 170 VKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKT 229
Query: 304 M------PEKNTV------------------------------SWN---AMIAGYVQTKR 324
M P++ TV S N A+I Y +
Sbjct: 230 MLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGD 289
Query: 325 MDMARELFEAM-TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
A+++F+A+ SWN +I GY + G + AR+LFD M D I++ +++ GY
Sbjct: 290 FGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIH 349
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
SG ++L LF+ M+R+ R++ ++L+ CA+L +L+ G+ LH + + EA ++
Sbjct: 350 SGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYL 409
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
G ALL MY KCG V+EA F+ + +DV +W MIAG A +G GK AL F M+ G
Sbjct: 410 GTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGF 469
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ ++ + +L+ACSH+ L+ +G YF M Y + P +HY CM+DLLGR+G LDEA
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAM 529
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+L+K MP +P+A W ++L ACR++ +LA+ AAE + ++EP+ G+YV L N+Y S
Sbjct: 530 DLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSR 589
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W + SK+R+ M +R VKK GYS + V +VH F V D HP I A LEE+ +LK
Sbjct: 590 QWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLK 649
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
G+ T + DV EEEKE L HSEKLA+A+G++++ P+ + KNLRVCEDCH+
Sbjct: 650 SLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHS 709
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK IS++ R II+RD +RFHHF G+CSC D+W
Sbjct: 710 AIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 227/505 (44%), Gaps = 79/505 (15%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR 121
R ++ + T + C + L P + N++I Y+ G AR+ FD++ +
Sbjct: 118 RPHSLLLCTMLHAACLRTML------PSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK 171
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D V+W ++ISG + L + L P RDV+SW ++++ Y++ A A F ML
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 182 E----KNEISWNGLLAAYVQNGRIE---EACMLFESKA-----NWEVVSWNSLMGGFVKQ 229
+E++ +L+A + +E +L E K N V +L+ + K
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVV----ALIDMYAKC 287
Query: 230 KRLGDAKWIFD---RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
G A+ +FD R P R + SWN +I GY ++ ++ A+ LF+E V+D+ T+ +M++
Sbjct: 288 GDFGHAQQVFDALGRGP-RPQ-SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMT 345
Query: 287 GYVQNGKVDEARMIFDAMPEK-----NTVSWNAMIA----GYVQTKRMDMA---RELFEA 334
GY+ +G++ EA ++F +M N N + A G +Q R A + L EA
Sbjct: 346 GYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEA 405
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
++ ++ Y + G + A +F RM + D +W A+IAG A +G + +L F
Sbjct: 406 ----DIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHF 461
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+M+ G + N + +VL+ C++ L G+ + + ++Y
Sbjct: 462 YQMRCDGFQPNSVSYIAVLTACSHSCLLNEGR---------------LYFDEMRILYNIH 506
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
+E + MI R G +A+ L +KT+ I+P+ + IL
Sbjct: 507 PQIEH---------------YGCMIDLLGRSGLLDEAMDL---VKTMPIQPNAVIWASIL 548
Query: 515 SAC---SHTGLVEKGTEYFYSMNRD 536
SAC H L + E+ + D
Sbjct: 549 SACRVHKHIDLAQCAAEHLLKLEPD 573
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 39/287 (13%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P+P + WN I + ++G D A +F+ M R +++N+M++GY+ +GQL A
Sbjct: 304 PRP------QSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREAL 357
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+F M + DL N + L+A +L G Q G A
Sbjct: 358 LLFMSMRRHDLRVDNFTVVNL-----LTACASL-----------------GALQQGRALH 395
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
A I R++E + LL Y++ GR++EA ++F+ +V +W +++ G
Sbjct: 396 A-CIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMG 454
Query: 233 GDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWTA 283
A F +M + VS+ ++T + + L E + F+E + + +
Sbjct: 455 KAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGC 514
Query: 284 MVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAR 329
M+ ++G +DEA + MP + N V W ++++ K +D+A+
Sbjct: 515 MIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQ 561
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/556 (42%), Positives = 335/556 (60%), Gaps = 15/556 (2%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQ--- 290
IF + + +NTMI G N+ E+ ++ +E D FT+ ++ +
Sbjct: 64 IFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLD 123
Query: 291 -NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+ ++ A E + ++++ Y + +D A ++F+ + KNVA+W +I+G
Sbjct: 124 SKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISG 183
Query: 350 YAQSGEITHARNLF-------DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
Y G+ A ++F D M + D +SW+++I GYA +G +++L LF +M G
Sbjct: 184 YIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGF 243
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
R + VL CA L +LELG + + F +G AL+ MY KCG ++ A+
Sbjct: 244 RPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWE 303
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F + KD++ WN I+G A G K A LF M+ GI+PD T VG+L AC+H GL
Sbjct: 304 VFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGL 363
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V++G +YF SM R + + P +HY CMVDLLGRAG LDEA L+K+MP E +A WGALL
Sbjct: 364 VDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALL 423
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
G CRL+ T+L E + + +EP N+G YVLLSN+Y+AS +W D +K+R M +RG+KK
Sbjct: 424 GGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKK 483
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
V GYSW+EV VH F VGDT HP ++IYA L EL LK G+V +T VL D+ EEE
Sbjct: 484 VPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEE 543
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KEH + HSEKLA+A+G++S IRV+KNLRVC DCH AIKHIS+ GR II+RDNN
Sbjct: 544 KEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNN 603
Query: 763 RFHHFSGGSCSCGDYW 778
RFH F+ GSCSC DYW
Sbjct: 604 RFHCFNDGSCSCKDYW 619
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 40/279 (14%)
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G ++ +F + + + + +I G + ++S+ ++ M++ G + F +L
Sbjct: 56 GNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLL 115
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI------ 467
CA L +LG +LHG +VK G E+ FV +L+ +Y KCG ++ A+ F++I
Sbjct: 116 KACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVA 175
Query: 468 --------------------------------VDKDVISWNTMIAGYARHGFGKDALMLF 495
++KD++SW++MI GYA +G K+AL LF
Sbjct: 176 AWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLF 235
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
M G +PD MVG+L AC+ G +E G M+R+ + N T ++D+ +
Sbjct: 236 FKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNE-FLGNPVLGTALIDMYAK 294
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
GR+D A + + M + D W A + + G + A
Sbjct: 295 CGRMDSAWEVFRGMR-KKDIVVWNAAISGLAMSGHVKAA 332
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 44/337 (13%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYVRNKS 138
+F+ + +N MI G +LN + +++ M + D ++ ++ R
Sbjct: 64 IFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLD 123
Query: 139 LSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
L ++ K D +++S Y + G+ D A ++FD + EKN +W +++
Sbjct: 124 SKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISG 183
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
Y+ G+ EA +F + +FD M +D VSW++MI
Sbjct: 184 YIGVGKCREAIDMFRRACS------------------------VFDGMLEKDIVSWSSMI 219
Query: 255 TGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
GYA N EA LF E D + ++ + G ++ + M
Sbjct: 220 QGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFL 279
Query: 308 -NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
N V A+I Y + RMD A E+F M K++ WN I+G A SG + A LF +M
Sbjct: 280 GNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQM 339
Query: 367 PQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+ D ++ ++ +G ++ + F M+R
Sbjct: 340 EKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMER 376
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 25/279 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-------EM 148
+++S Y G +D A +VFD +P++++ +W +ISGY+ A ++F +
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIE-- 202
M ++D+VSW++M+ GYA NG A +F +ML + + + G+L A + G +E
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266
Query: 203 --EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ ++ ++ V +L+ + K R+ A +F M +D V WN I+G A +
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326
Query: 261 NYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----- 311
++ A LF E++ ++ D T+ ++ G VDE R F++M T++
Sbjct: 327 GHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEH 386
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG 349
+ M+ + +D A +L ++M + N W ++ G
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 29/278 (10%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ----LDPARQ---VFDQMPQ 120
++ + + G D+A VF+ +P ++ ++ A+ISGY+ G+ +D R+ VFD M +
Sbjct: 150 VSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLE 209
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADA---A 173
+D+VSW+ MI GY N A +LF M + D + +L A+ G + A
Sbjct: 210 KDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWA 269
Query: 174 RRIFDR-MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
+ DR N + L+ Y + GR++ A +F ++V WN+ + G +
Sbjct: 270 SNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHV 329
Query: 233 GDAKWIFDRMPVRD-EVSWNTMI--------TGYAQN--NYLAEAQRLFEEAPVKDVFTW 281
A +F +M E NT + G Y +R+F P ++ +
Sbjct: 330 KAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTP--EIEHY 387
Query: 282 TAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG 318
MV + G +DEA + +MP E N + W A++ G
Sbjct: 388 GCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
SL+ K +H L+++G + ++ N +L G+ ++ F + + ++ +NTMI
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G + ++++ ++ SM+ G+ PD T +L AC+ L K + + G
Sbjct: 82 GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARL-LDSKLGIKLHGLVVKAGCE 140
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL------GACRLYGKTELA 594
++ T +V L G+ G +D A + ++P E + A W A++ G CR ++
Sbjct: 141 SDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISGYIGVGKCR--EAIDMF 197
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
+A V M ++ + + YA++G + + KM + G +
Sbjct: 198 RRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFR 244
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 270/757 (35%), Positives = 415/757 (54%), Gaps = 60/757 (7%)
Query: 80 ALHVF-NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYV 134
A VF NS + YN++I GY +G + A +F +M D ++ +S
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 135 RNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
++++ + ++ K +D+ N+++ YA+ G D+AR++FD M E+N +SW
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNS-----LMGGFVKQKRL--GDAKWIFDR-- 241
++ Y + ++A LF E V+ NS ++ K + L G+ + F R
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 242 -MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
+ V D + + ++ Y + N + A+RLF+E ++ AM S YV+ G EA +
Sbjct: 266 GIEVND-LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 301 FDAM------PEKNTV-----------------------------SW----NAMIAGYVQ 321
F+ M P++ ++ SW NA+I Y++
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
R D A +F+ M+ K V +WN+++ GY ++GE+ A F+ MP+ + +SW II+G
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 382 AQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Q E+++ +F M+ + G + S+ S C +L +L+L K ++ + K G +
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+G L+ M+ +CG E A F + ++DV +W I A G + A+ LF+ M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G+KPD + VG L+ACSH GLV++G E FYSM + +GV P HY CMVDLLGRAG L+
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA L+++MP EP+ W +LL ACR+ G E+A AAE I + PE G YVLLSN+YA
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 684
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
++GRW D++KVRL M+++G++K G S ++++ K H F+ GD HPE I A L+E+
Sbjct: 685 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
+ G V VL DV E+EK ML HSEKLA+AYG++S G IR++KNLRVC D
Sbjct: 745 RASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSD 804
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
CH+ K SK+ R IILRDNNRFH+ G CSCGD+
Sbjct: 805 CHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 356 ITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
++ A+ +F+ + C + ++I GYA SG +++ LF+ M G ++ F LS
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA + G Q+HG +VK+G+ FV N+L+ Y +CG ++ A F+E+ +++V+S
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 475 WNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
W +MI GYAR F KDA+ LF M + + P+ +TMV ++SAC+ +E G E Y+
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG-EKVYAF 261
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
R+ G+ N + +VD+ + +D A+ L
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 226/533 (42%), Gaps = 83/533 (15%)
Query: 31 NTNPYPSKKTLKRHLNSKSRNKPKPAGDW------------DIRQWNVAITTHMRNGCCD 78
N+ P K T L++ ++++ K G D+ N + + G D
Sbjct: 127 NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELD 186
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN-----VMISGY 133
SA VF+ M R+ VS+ +MI GY A +F +M + + V+ N +IS
Sbjct: 187 SARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSG----YAQNGYADAARRIFDRMLEKNEISWN 189
+ + L ++ + + + M+S Y + D A+R+FD N N
Sbjct: 247 AKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCN 306
Query: 190 GLLAAYVQNGRIEEACMLF-------------------ESKANWEVVSW----------- 219
+ + YV+ G EA +F S + + W
Sbjct: 307 AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 366
Query: 220 ---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
N+L+ ++K R A IFDRM + V+WN+++ GY +N + A F
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK-----RM 325
E P K++ +W ++SG VQ +EA +F +M + V+ + + + + +
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 326 DMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
D+A+ ++ + KN V T++ +++ G+ A ++F+ + D +W A I
Sbjct: 487 DLAKWIYYYIE-KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV----- 435
A +G +E ++ LF +M G + + F L+ C++ ++ GK++ ++K+
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 436 -GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
GC V + + G +EEA E++ ++ + + WN+++A G
Sbjct: 606 EDVHYGCMVD-----LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 151/320 (47%), Gaps = 27/320 (8%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WD N I +M+ D+A +F+ M ++ V++N++++GY+ NG++D A + F+ M
Sbjct: 371 WD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAA 173
P++++VSWN +ISG V+ A +F M + D V+ ++ S G D A
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 174 RRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ I+ +EKN I + L+ + + G E A +F S N +V +W + +G
Sbjct: 490 KWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 229 QKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF------EEAPVKDV 278
A +FD M + D V++ +T + + + + +F +DV
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM---ARELFEA 334
+ MV + G ++EA + + MP E N V WN+++A ++M A E +
Sbjct: 609 H-YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV 667
Query: 335 MTCKNVASWNTMITGYAQSG 354
+ + S+ + YA +G
Sbjct: 668 LAPERTGSYVLLSNVYASAG 687
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/705 (36%), Positives = 374/705 (53%), Gaps = 85/705 (12%)
Query: 128 VMISGYVRNKSLSAARNLFEMMPK-----RDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
V++ + K + R L EM+ D V +++ Y+ G +R +FD++
Sbjct: 110 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
KN LF+ WN+++ + + + DA IF +
Sbjct: 170 KN----------------------LFQ---------WNAIVSAYTRNELFEDAMSIFSEL 198
Query: 243 PV-----RDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGK 293
D + +I A L Q + A V DVF A+++ Y + G
Sbjct: 199 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 258
Query: 294 VDEA-RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT---------------- 336
V+EA + +FD M K SWNA++ GY Q A +L+ MT
Sbjct: 259 VEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 318
Query: 337 -CKNVASWN----------------------TMITGYAQSGEITHARNLFDRMPQHDCIS 373
C + S + ++++ Y G+ A+ LFD M +S
Sbjct: 319 ACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 378
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +IAGY+Q+G ++++ LF +M G + V C+ L++L LGK+LH +
Sbjct: 379 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 438
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K FV ++++ MY K G + + F+ + +KDV SWN +IAGY HG GK+AL
Sbjct: 439 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALE 498
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LFE M +G+KPDD T GIL ACSH GLVE G EYF M + + P +HYTC+VD+L
Sbjct: 499 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 558
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GRAGR+D+A L++ MP +PD+ W +LL +CR++G L EK A + E+EPE YV
Sbjct: 559 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 618
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
L+SNL+A SG+W DV +VR +M+D G++K G SW+EV KVH F +GD + PE + +
Sbjct: 619 LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRE 678
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
LE K+ G+ T VLHD+ EE+K +LR HSEKLA+++G+L+ G P+RV K
Sbjct: 679 TWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYK 738
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLR+C DCHNA K ISK+V R I++RDN RFHHF G CSCGDYW
Sbjct: 739 NLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 184/466 (39%), Gaps = 131/466 (28%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE---------- 147
+I+ Y + G +R VFD++ +++L WN ++S Y RN+ A ++F
Sbjct: 147 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 206
Query: 148 --------------------------MMPKRDVVS----WNTMLSGYAQNGYA-DAARRI 176
M K D+VS N +++ Y + G +A +R+
Sbjct: 207 DNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRV 266
Query: 177 FDRMLEKNEISWNGLLAAYVQN-------------------------GRIEEACMLFESK 211
FD M K SWN LL Y QN G + AC +S
Sbjct: 267 FDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSL 326
Query: 212 ANWEVVSWNSLMGGFVKQKRLG--------------DAKWIFDRMPVRDEVSWNTMITGY 257
E + +L G +G A+ +FD M R VSWN MI GY
Sbjct: 327 HYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGY 386
Query: 258 AQNNYLAEAQRLFEE------AP---------------------------------VKDV 278
+QN EA LF + P +D+
Sbjct: 387 SQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDI 446
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
F ++++ Y + G + ++ IFD + EK+ SWN +IAGY R A ELFE M
Sbjct: 447 FVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRL 506
Query: 339 NVASWNTMITGY----AQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSED 389
+ + TG + +G + F++M I + ++ ++G +D
Sbjct: 507 GLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDD 566
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+LRL EM G+ +R ++S+LS+C +L LG+++ +L+++
Sbjct: 567 ALRLIEEMP--GDPDSR-IWSSLLSSCRIHGNLGLGEKVANKLLEL 609
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 27/270 (10%)
Query: 76 CCD---SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
CC +A +F+ M RS VS+N MI+GY NG D A +F QM + + + I
Sbjct: 357 CCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 416
Query: 133 YVRNKS-LSAAR-----NLFEMMP--KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
S LSA R + F + D+ ++++ YA+ G ++RIFDR+ EK+
Sbjct: 417 VCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKD 476
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFD 240
SWN ++A Y +GR +EA LFE + ++ ++ + D F+
Sbjct: 477 VASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFN 536
Query: 241 RMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKV 294
+M + + ++ + + +A RL EE P D W++++S +G +
Sbjct: 537 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNL 596
Query: 295 ----DEARMIFDAMPEK--NTVSWNAMIAG 318
A + + PEK N V + + AG
Sbjct: 597 GLGEKVANKLLELEPEKPENYVLISNLFAG 626
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/716 (36%), Positives = 388/716 (54%), Gaps = 55/716 (7%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN-----VMISGYVRNKSLSAARNLFEM 148
+YN +IS Y N + + M D + + ++ + S R L
Sbjct: 54 NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113
Query: 149 MPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
K DV N +++ Y + G +AR +FD+M E++ +SW +L YV++ EA
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173
Query: 205 CMLFESK-------ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE---VSWNT-M 253
L + ++S ++ G + K G A + V DE VS T +
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKS-GRAVHGYIVRNVGDEKMEVSMTTAL 232
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NT 309
I Y + LA AQRLF+ + V +WT M++G +++ ++DE F+ M E+ N
Sbjct: 233 IDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNE 292
Query: 310 VSWNAMI--AGYVQTKRMDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNL 362
++ ++I G+V T +D+ + F A +N +A +I Y + G++ +AR L
Sbjct: 293 ITLLSLITECGFVGT--LDLGK-WFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARAL 349
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F+ + + D W+ +I+ YA + LF+EM + N S+LS CA +L
Sbjct: 350 FNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGAL 409
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LGK H + + G E + AL+ MY KCG V A F E + +D+ WNTM+AG+
Sbjct: 410 DLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGF 469
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+ HG GK+AL LF M++ G++P+DIT V I ACSH+GL+E
Sbjct: 470 SMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME------------------ 511
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
HY C+VDLLGRAG LDEA N+++NMP P+ WGALL AC+L+ L E AA I
Sbjct: 512 --HYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKIL 569
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E++P+N G VL SN+YA++ RW DV+ VR M G+KK G SW+EV VH F GD
Sbjct: 570 ELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGD 629
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
+ ++Y + E+ KL++ G+ +T VL ++ EEEKE L YHSEKLA A+G++S
Sbjct: 630 KACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLIS 689
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIR++KNLR+C+DCH A K +SKI GR II+RD NRFHHFS G CSC YW
Sbjct: 690 TAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 221/526 (42%), Gaps = 78/526 (14%)
Query: 4 NNRLRQLHSSCILHQHTQSINRLQ-----SPANTNPYPSKKTLKRHLNSKSRNKPKPAGD 58
NN L Q +C LH + L S S L R L+ ++ K
Sbjct: 64 NNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQ---KNGFA 120
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
D+ N + + + GC SA VF+ MP R VS+ M+ Y+ + A ++
Sbjct: 121 SDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLV--- 177
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV--------------VSWNT-MLSG 163
R++ V +SG ++ NL +M R V VS T ++
Sbjct: 178 --REMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDM 235
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSW 219
Y + G +A+R+FDR+ +++ +SW ++A +++ R++E F E K ++
Sbjct: 236 YCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITL 295
Query: 220 NSLMG--GFVKQKRLGDAKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEE 272
SL+ GFV LG KW F +R+ + +I Y + + A+ LF
Sbjct: 296 LSLITECGFVGTLDLG--KW-FHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNG 352
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMA 328
KDV W+ ++S Y +D+ +F M + N V+ ++++ + +D+
Sbjct: 353 VKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLG 412
Query: 329 --------RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
R E +V +I YA+ G++T AR+LF+ Q D W ++AG
Sbjct: 413 KWTHAYINRHGLEV----DVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAG 468
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
++ G +++L LF EM+ +G N F S+ C++ +E G
Sbjct: 469 FSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME--------------HYG 514
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
C V + + G ++EA++ E + + + I W ++A H
Sbjct: 515 CLVD-----LLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH 555
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/707 (34%), Positives = 387/707 (54%), Gaps = 59/707 (8%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+I+ Y + A + + +P + S+++++ + + +F RM I
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 189 NGLL----------AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ +L +A+ +I C+ S + + S+ +++ R+GDA+ +
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIH--CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKV 294
FDRM +D V+ + ++ YA+ L E R+ E ++ +W ++SG+ ++G
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 295 DEARMIFDAM------PEKNTVS---------------------------------WNAM 315
EA ++F + P++ TVS +AM
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DC 371
I Y ++ + LF N ITG +++G + A +F+ + +
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+SW +IIAG AQ+G ++L LF EM+ G + N S+L C N+A+L G+ HG
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
V+V VG+AL+ MY KCG + + F + K+++ WN+++ G++ HG K+
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
+ +FES+ +KPD I+ +LSAC GL ++G +YF M+ +YG+ P +HY+CMV+
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG+L EA +L+K MPFEPD+ WGALL +CRL +LAE AAE +F +EPEN G
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGT 593
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVLLSN+YAA G W +V +R KM G+KK G SW++V+N+V+T GD HP+ D+I
Sbjct: 594 YVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
Query: 672 YAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
++E+ ++++ G + LHDV E+E+E ML HSEKLAV +G+L+ P G P++V
Sbjct: 654 TEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQV 713
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLR+C DCH IK IS GR I +RD NRFHHF G CSCGD+W
Sbjct: 714 IKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 190/432 (43%), Gaps = 72/432 (16%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL-SAARNLFEMMP---KR 152
+M Y+ G++ AR+VFD+M +D+V+ + ++ Y R L R L EM +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
++VSWN +LSG+ ++GY A +F + I G V + S
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQK------IHHLGFCPDQVTVSSV------LPSVG 263
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ E+++ L+ G+V ++ L ++D+ + MI Y ++ ++ LF +
Sbjct: 264 DSEMLNMGRLIHGYVIKQGL-----------LKDKCVISAMIDMYGKSGHVYGIISLFNQ 312
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMA 328
+ + A ++G +NG VD+A +F+ E+ N VSW ++IAG Q + A
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 329 RELFEAM-----------------TCKNVASW----------------------NTMITG 349
ELF M C N+A+ + +I
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA+ G I ++ +F+ MP + + W +++ G++ G +++ + +F + R + + F
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF 492
Query: 410 TSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI- 467
TS+LS C + + G K + G + + ++ + + G ++EAY +E+
Sbjct: 493 TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552
Query: 468 VDKDVISWNTMI 479
+ D W ++
Sbjct: 553 FEPDSCVWGALL 564
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 177/407 (43%), Gaps = 32/407 (7%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSW 126
+MR G A VF+ M + V+ +A++ Y G L+ ++ +M + ++VSW
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 127 NVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRI----FD 178
N ++SG+ R+ A +F+ + D V+ +++L + + R I
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ L K++ + ++ Y ++G + LF E N+ + G + + A +
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 239 FDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQ 290
F+ + + VSW ++I G AQN EA LF E V V T +M+
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 291 NGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
+ R N +A+I Y + R+++++ +F M KN+ WN++
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSL 460
Query: 347 ITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYG 401
+ G++ G+ ++F+ + + D IS+ ++++ Q G +++ + F M + YG
Sbjct: 461 MNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYG 520
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ ++ +++ L+ L + ++ FE V ALL
Sbjct: 521 IKPRLEHYSCMVNLLGRAGKLQEAYDL---IKEMPFEPDSCVWGALL 564
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 143/325 (44%), Gaps = 27/325 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF----DQMPQRDL 123
I + ++G + +FN + NA I+G NG +D A ++F +Q + ++
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSG---YAQNGYADAARRI 176
VSW +I+G +N A LF M K + V+ +ML A G+ +
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 177 FDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
R+ L N + L+ Y + GRI + ++F +V WNSLM GF + +
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 236 KWIFDR-MPVR---DEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFT-WTAMVS 286
IF+ M R D +S+ ++++ Q E + F EE +K ++ MV+
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 287 GYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM----ARELFEAMTCKNVA 341
+ GK+ EA + MP E ++ W A++ +D+ A +LF + +N
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFH-LEPENPG 592
Query: 342 SWNTMITGYAQSGEITHARNLFDRM 366
++ + YA G T ++ ++M
Sbjct: 593 TYVLLSNIYAAKGMWTEVDSIRNKM 617
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/538 (41%), Positives = 335/538 (62%), Gaps = 3/538 (0%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR--IEEACM 206
+ R ++ N +S A+ G AARR+FD M ++ +SWN LL A + GR + A
Sbjct: 10 LAARRLLRDNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAARR 69
Query: 207 LF-ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
LF E+ + +VVSWNS++ G + L A F P R+ +WN M+ G + +
Sbjct: 70 LFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADD 129
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
A RLF E P ++V ++T MV G + G+V AR +FDAMP++N VSW AMI+GYV+
Sbjct: 130 ADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMF 189
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
A +LFEAM KNV + MIT Y + G++ AR LFD + D ISW +IAGY +G
Sbjct: 190 VEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNG 249
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ E+++RL M R G + + + +VL+ C+ LA L GK H +K E+G N
Sbjct: 250 HGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSN 309
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG+V E+ F + KD++SWNT+IA YA+HG + + LF M+ G+ P
Sbjct: 310 ALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIP 369
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
DDIT + +LSAC H G V+ + F M+ Y + P ++HY C+VD+L RAG+L++A +
Sbjct: 370 DDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSY 429
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+K+MP E + WG+LLGAC+++G +L E AA+++ + + E++G YV+LSN+YAA+G W
Sbjct: 430 IKDMPLEAEKNVWGSLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILSNIYAAAGMW 489
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
G V++VR +M++RGVKK GYSW E+ N+VH F GD HPE +I + L ++ F ++
Sbjct: 490 GQVNQVRGQMKERGVKKQPGYSWTEIANEVHMFVGGDASHPEMRKIISELRKISFHMR 547
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 194/385 (50%), Gaps = 42/385 (10%)
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR--NKSLSAAR 143
S+ R + N IS G + AR+VFD MP RD+VSWN +++ R L AAR
Sbjct: 9 SLAARRLLRDNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAAR 68
Query: 144 NLF-EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
LF E MP RDVVSWN++++G +G DAA F ++N +WN +LA ++ GR +
Sbjct: 69 RLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRAD 128
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
+A LF VVS+ +++ G ++ + A+ +FD MP R+ VSW MI+GY +N
Sbjct: 129 DADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGM 188
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
EA +LFE P K+V TAM++ Y + G V+ AR +FD + K+ +SWN MIAGYV
Sbjct: 189 FVEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHN 248
Query: 323 KRMDMAREL---------------------------------------FEAMTCKNVASW 343
+ A L +AM ++
Sbjct: 249 GHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFS 308
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N ++T Y++ G + + +F + D +SW IIA YAQ G + + LF EM+ G
Sbjct: 309 NALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLI 368
Query: 404 LNRSPFTSVLSTCANLASLELGKQL 428
+ F SVLS C ++ ++ +L
Sbjct: 369 PDDITFLSVLSACGHVGKVDASLKL 393
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 150/295 (50%), Gaps = 43/295 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN + +R G D A +F MP+R+ VSY M+ G G++ AR+VFD MP
Sbjct: 110 NVATWNAMLAGLLRLGRADDADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMP 169
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
R+LVSW MISGYV N A LFE MP+++VV+ M++ Y + G ++ARR+FD
Sbjct: 170 DRNLVSWAAMISGYVENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDG 229
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEA-----------------------------CMLFES 210
+ K+ ISWN ++A YV NG EEA +L +
Sbjct: 230 IRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQG 289
Query: 211 KANWEV---------VSW-NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
K+ + +S+ N+LM + K +G+++ +F + +D VSWNT+I YAQ+
Sbjct: 290 KSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQH 349
Query: 261 NYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
+ LF E + D T+ +++S GKVD + +FD M K +S
Sbjct: 350 GKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAIS 404
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 175/366 (47%), Gaps = 45/366 (12%)
Query: 42 KRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISG 101
+ HL + R + D+ WN I + +G D+A F P+R+ ++NAM++G
Sbjct: 61 RHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAG 120
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML 161
L G+ D A ++F +MP+R++VS+ M+ G R ++ AR +F+ MP R++VSW M+
Sbjct: 121 LLRLGRADDADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMI 180
Query: 162 SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
SGY +NG A ++F+ M EKN ++ ++ +Y + G +E A LF+ +V+SWN
Sbjct: 181 SGYVENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWN- 239
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKD 277
TMI GY N + EA RL F E D
Sbjct: 240 ------------------------------TMIAGYVHNGHGEEAMRLHAVMFREGVKPD 269
Query: 278 VFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
T A+++ ++ GK A + AM E NA++ Y + + + +F
Sbjct: 270 HATLIAVLTACSALALLRQGKSTHA-IAIKAMLESGISFSNALMTMYSKCGNVGESELVF 328
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSE 388
+ K++ SWNT+I YAQ G+ LF M D I++ ++++ G +
Sbjct: 329 INLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKVD 388
Query: 389 DSLRLF 394
SL+LF
Sbjct: 389 ASLKLF 394
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/750 (33%), Positives = 401/750 (53%), Gaps = 93/750 (12%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+D W + ++ L+ AR +F+ +P D ++N ++ Y+ G AA ++ M
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 181 LE----KNEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
L N+ ++ +L A ++ GR A VS +L+ +++ R
Sbjct: 92 LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVS-TALIDLYIRCAR 150
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNN------------------------------ 261
G A+ +F +MP+RD V+WN M+ GYA +
Sbjct: 151 FGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210
Query: 262 YLAEAQRLFEEAPV-------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
LA+ LF+ + + V TA++ Y + ++ A +F MP +N
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAM------------------TCKNVASW------- 343
V+W+A+I G+V RM A LF+ M C ++A
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330
Query: 344 ---------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
N++++ YA++G I A FD + D IS+ A+++G Q+G +E
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++ +F +M+ + + S++ C++LA+L+ GK HG ++ G + N+L+
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG ++ + F+++ +DV+SWNTMIAGY HG GK+A LF MK G PDD+
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + +++ACSH+GLV +G +F +M YG++P +HY CMVDLL R G LDEA +++
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MP + D WGALLGACR++ +L ++ + +I ++ PE G +VLLSN+++A+GR+ +
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++VR+ + +G KK GYSW+E+ +H F GD HP IY L+ + +K+ G+
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQ 690
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T VL D+ EEEKE L YHSEKLA+A+G+LS+ + I V KNLRVC DCH AIK++
Sbjct: 691 ADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYM 750
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ + R II+RD NRFHHF G CSCG++W
Sbjct: 751 TLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/558 (23%), Positives = 225/558 (40%), Gaps = 132/558 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D +QW + H+ G A VF+ +P + +YNA+I Y G A ++ M
Sbjct: 33 DKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSML 92
Query: 119 -----PQR---------------------------------DLVSWNVMISGYVRNKSLS 140
P + DL +I Y+R
Sbjct: 93 RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFG 152
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNG-YADAARRIFDRM----LEKNEISWNGLLAAY 195
ARN+F MP RDVV+WN ML+GYA +G Y A + D L N + LL
Sbjct: 153 PARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLL 212
Query: 196 VQNG------RIEEACMLFESKANWE-VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
Q+G I C+ + N E V+ +L+ + K K+L A +F MPVR++V
Sbjct: 213 AQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV 272
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK-------------------------------- 276
+W+ +I G+ + + EA LF++ V+
Sbjct: 273 TWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHAL 332
Query: 277 --------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
D+ +++S Y + G ++EA M FD + K+T+S+ A+++G VQ + + A
Sbjct: 333 IAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEA 392
Query: 329 RELFEAM-----------------TCKNVASW----------------------NTMITG 349
+F+ M C ++A+ N++I
Sbjct: 393 FLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDM 452
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA+ G+I +R +FD+MP D +SW +IAGY G +++ LF+ MK G + F
Sbjct: 453 YAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTF 512
Query: 410 TSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI- 467
+++ C++ + GK + K G ++ + + G ++EAY + +
Sbjct: 513 ICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMP 572
Query: 468 VDKDVISWNTMIAGYARH 485
+ DV W ++ H
Sbjct: 573 LKADVRVWGALLGACRIH 590
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/537 (43%), Positives = 326/537 (60%), Gaps = 38/537 (7%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+F +++ YV+ +++A +FD MP++N +SW MI+ Y + K A EL M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 338 KNVA-----------SWNTM-------------------------ITGYAQSGEITHARN 361
NV S N M I +A+ GE A +
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+FD M D I W +II G+AQ+ S+ +L LF MKR G ++ TSVL C LA
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
LELG Q H +VK ++ + NAL+ MYCKCGS+E+A F ++ ++DVI+W+TMI+G
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
A++G+ ++AL LFE MK+ G KP+ IT+VG+L ACSH GL+E G YF SM + YG+ P
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+HY CM+DLLG+AG+LD+A L+ M EPDA TW LLGACR+ LAE AA+ +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 453
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
++PE+AG Y LLSN+YA S +W V ++R +MRDRG+KK G SW+EV ++H F +G
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D HP+ + L +L +L G+V T VL D+ E+ E LR+HSEKLA+A+G++
Sbjct: 514 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++P + IR+ KNLR+C DCH K SK+ R I++RD R+HHF G CSCGDYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 46/272 (16%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H++ + R N +I+ Y+ L+ A Q+FDQMPQR+++SW MIS Y + K
Sbjct: 86 HLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQK 145
Query: 142 ARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAARR---IFDRMLEKNEISWNGLLAA 194
A L +M + +V +++++L + NG +D I LE + + L+
Sbjct: 146 ALELLVLMLRDNVRPNVYTYSSVLR--SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV---------- 244
+ + G E+A +F+ + + WNS++GGF + R A +F RM
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 245 ---------------------------RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+D + N ++ Y + L +A R+F + +D
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
V TW+ M+SG QNG EA +F+ M T
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 59/355 (16%)
Query: 11 HSSCILHQHTQSINRLQSPANTNP-YPSKKTLKRHLNSKSRNKPKPAG------DWDIRQ 63
+S C +HQ + L N P + ++ R N S + G + D+
Sbjct: 137 YSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFV 196
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ--- 120
+ I + G + AL VF+ M ++ +N++I G+ N + D A ++F +M +
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 121 ----------------------------------RDLVSWNVMISGYVRNKSLSAARNLF 146
+DL+ N ++ Y + SL A +F
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIE 202
M +RDV++W+TM+SG AQNGY+ A ++F+RM + N I+ G+L A G +E
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 203 EACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG 256
+ F S + + ++ K +L DA + + M D V+W T++
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 257 --YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+N LAE A+++ P +D T+T + + Y + K D I M ++
Sbjct: 437 CRVQRNMVLAEYAAKKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDR 490
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 129/297 (43%), Gaps = 34/297 (11%)
Query: 377 IIAGYAQSGYSED---SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
+++ + + Y D +++ ++ +G + + ++ ++ C + ++ G + L
Sbjct: 29 LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLY 88
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
G F+ N L+ MY K + +A+ F+++ ++VISW TMI+ Y++ + AL
Sbjct: 89 FNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALE 148
Query: 494 LFESMKTVGIKPDDITMVGILSACS--------HTGLVEKGTE-----------YFYSMN 534
L M ++P+ T +L +C+ H G++++G E F +
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 535 R--------DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLG 583
D V ++ + ++ + R D A L K M F + AT ++L
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
AC EL +A I + + ++ + L ++Y G D +V +M++R V
Sbjct: 269 ACTGLALLELGMQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/526 (42%), Positives = 334/526 (63%), Gaps = 18/526 (3%)
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQT 322
++LF+ PV+DV +W +++G QNG +EA + M ++N + + ++++ + +
Sbjct: 153 RKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEH 212
Query: 323 KRMDMAREL--------FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+ +E+ F+ K+V +++I YA+ ++ + F + D ISW
Sbjct: 213 ANVTKGKEIHGYAIRHGFD----KDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISW 268
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+IIAG Q+G + L F M + + + F+SV+ CA+L +L LGKQLH +++
Sbjct: 269 NSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR 328
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFE--EIVDKDVISWNTMIAGYARHGFGKDAL 492
+GF+ F+ ++LL MY KCG+++ A + F E+ D+D++SW +I G A HG DA+
Sbjct: 329 LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAV 388
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
LFE M G+KP + + +L+ACSH GLV++G +YF SM RD+GV P +HY + DL
Sbjct: 389 SLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADL 448
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAGRL+EA + + NM EP + W LL ACR + ELAEK I ++P N G +
Sbjct: 449 LGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAH 508
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
V++SN+Y+A+ RW D +K+R++MR G+KK SW+EV NKVHTF GD HP D+I
Sbjct: 509 VIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKIN 568
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
L L +++++G+V T VLHDV EE K +LR HSE+LA+A+GI+S +G IRV+
Sbjct: 569 EALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVI 628
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KN+RVC DCH AIK ++KIVGR II+RDN+RFHHF GSCSCGDYW
Sbjct: 629 KNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 126/238 (52%), Gaps = 2/238 (0%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
S +I R LFDRMP D +SW +IAG AQ+G E++L + EM + R + +S+
Sbjct: 146 SVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSI 205
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L A++ GK++HG ++ GF+ F+G++L+ MY KC VE + AF + ++D
Sbjct: 206 LPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDA 265
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
ISWN++IAG ++G L F M +KP ++ ++ AC+H + G +
Sbjct: 266 ISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAY 325
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF-EPDAATWGALLGACRLYG 589
+ R G N + ++D+ + G + A+ + + + D +W A++ C ++G
Sbjct: 326 IIR-LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHG 382
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 140/337 (41%), Gaps = 82/337 (24%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA----------------P 274
++ + +FDRMPVRD VSWNT+I G AQN EA + +E P
Sbjct: 148 KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILP 207
Query: 275 V-----------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
+ KDVF ++++ Y + +V+ + F + ++ +S
Sbjct: 208 IFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAIS 267
Query: 312 WNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN---------- 344
WN++IAG VQ R D F M C ++ + N
Sbjct: 268 WNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYII 327
Query: 345 ------------TMITGYAQSGEITHARNLFDR--MPQHDCISWAAIIAGYAQSGYSEDS 390
+++ YA+ G I AR +F++ M D +SW AII G A G++ D+
Sbjct: 328 RLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDA 387
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLV 449
+ LF EM G + F +VL+ C++ ++ G K + G G A+
Sbjct: 388 VSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVAD 447
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVIS-WNTMIAGYARH 485
+ + G +EEAY + ++ S W+T++A H
Sbjct: 448 LLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAH 484
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 167/360 (46%), Gaps = 38/360 (10%)
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLS 162
++D R++FD+MP RD+VSWN +I+G +N A N+ + M K D + +++L
Sbjct: 148 KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILP 207
Query: 163 GYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
+ ++ + I + +K+ + L+ Y + ++E + F +N + +S
Sbjct: 208 IFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAIS 267
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNYLAEAQRL----- 269
WNS++ G V+ R F RM +VS++++I A L ++L
Sbjct: 268 WNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYII 327
Query: 270 ---FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA--MPEKNTVSWNAMIAGYVQTKR 324
F++ + F ++++ Y + G + AR IF+ M +++ VSW A+I G
Sbjct: 328 RLGFDD----NKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGH 383
Query: 325 MDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WA 375
A LFE M V ++ ++T + +G + F+ M + ++ +A
Sbjct: 384 ALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYA 443
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+ ++G E++ M GE S ++++L+ C ++EL +++ +++ V
Sbjct: 444 AVADLLGRAGRLEEAYDFISNM---GEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLV 500
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 36/247 (14%)
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
++W II YA G SL F ++ +G +R F S+L L + LH
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 432 LVKVGFEAGCFVGNALLVMYCK----------------------CGSVEEAYHAFEEIVD 469
++++GF + NAL+ MY K ++ F+ +
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE- 528
+DV+SWNT+IAG A++G ++AL + + M ++PD T+ IL + V KG E
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221
Query: 529 --YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE---AQNLMKNMPFEPDAATWGALLG 583
Y D V S ++D+ + +++ A +L+ N DA +W +++
Sbjct: 222 HGYAIRHGFDKDVFIGSS----LIDMYAKCTQVELSVCAFHLLSNR----DAISWNSIIA 273
Query: 584 ACRLYGK 590
C G+
Sbjct: 274 GCVQNGR 280
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 182/406 (44%), Gaps = 43/406 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQV- 114
D+ WN I + +NG + AL++ M R S + ++++ + + + +++
Sbjct: 163 DVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIH 222
Query: 115 -------FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
FD +D+ + +I Y + + + F ++ RD +SWN++++G QN
Sbjct: 223 GYAIRHGFD----KDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN 278
Query: 168 GYADAARRIFDRMLEKN----EISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVS 218
G D F RML++ ++S++ ++ A + G+ A ++ + + ++
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIA 338
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPV--RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
+SL+ + K + A++IF+++ + RD VSW +I G A + + +A LFEE V
Sbjct: 339 -SSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVD 397
Query: 277 DV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDM 327
V + A+++ G VDE F++M V+ + A+ + R++
Sbjct: 398 GVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEE 457
Query: 328 ARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG---YAQ 383
A + M + S W+T++ I A + +++ D + A + Y+
Sbjct: 458 AYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSA 517
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ D+ +L + M++ G L ++P S + + + G + H
Sbjct: 518 AQRWRDAAKLRVRMRKTG--LKKTPACSWIEVGNKVHTFLAGDKSH 561
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/644 (36%), Positives = 349/644 (54%), Gaps = 80/644 (12%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+V N+L+ + + L A+ +FD++ +D VSW+TMI Y ++ L EA L +
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMH 217
Query: 275 V-----------------------------------------KDVFTWTAMVSGYVQNGK 293
V V TA++ YV+
Sbjct: 218 VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN 277
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF--------------------- 332
+ AR +FD + + + +SW AMIA Y+ ++ LF
Sbjct: 278 LAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKE 337
Query: 333 -------------EAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
A T +N + I Y + G++ AR++FD D + W
Sbjct: 338 CGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMW 397
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+A+I+ YAQ+ +++ +F+ M G R N S+L CA SLE+GK +H + K
Sbjct: 398 SAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDK 457
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
G + + + + MY CG ++ A+ F E D+D+ WN MI+G+A HG G+ AL L
Sbjct: 458 QGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALEL 517
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
FE M+ +G+ P+DIT +G L ACSH+GL+++G F+ M ++G P +HY CMVDLLG
Sbjct: 518 FEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLG 577
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAG LDEA L+K+MP P+ A +G+ L AC+L+ +L E AA+ +EP +G VL
Sbjct: 578 RAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVL 637
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
+SN+YA++ RWGDV+ +R M+D G+ K G S +EV +H F +GD HP+ ++Y
Sbjct: 638 MSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEM 697
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
++E+ KL+ G+ VLH++ +E+K L YHSEKLA+AYG++S G PIR++KN
Sbjct: 698 IDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKN 757
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LRVC+DCHNA K +SKI GR II+RD NRFHHF GSCSC DYW
Sbjct: 758 LRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 188/478 (39%), Gaps = 102/478 (21%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-------- 119
IT++++N C A ++ M + N +I L L P+ + ++
Sbjct: 96 ITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGF 155
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
D+ N +I Y SL+ AR LF+ + +DVVSW+TM+ Y ++G D A +
Sbjct: 156 HGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRD 215
Query: 180 M-------LEKNEISWNGLLA--AYVQNGRIEEACMLFESKANWEVVSW-NSLMGGFVKQ 229
M E IS +LA A ++ G+ A ++ K V +L+ +VK
Sbjct: 216 MHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKC 275
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------------------- 270
+ L A+ +FD + +SW MI Y N L E RLF
Sbjct: 276 ENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLV 335
Query: 271 ---------EEAPVKDVFTW-----------TAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
E + FT TA + Y + G V AR +FD+ K+ +
Sbjct: 336 KECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLM 395
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMT-----------------CKNVAS-----W----- 343
W+AMI+ Y Q +D A ++F MT C S W
Sbjct: 396 MWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYI 455
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
+ + YA G+I A LF D W A+I+G+A G+ E +L
Sbjct: 456 DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAAL 515
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEA-----GCFV 443
LF EM+ G N F L C++ L+ GK+L ++V + GF GC V
Sbjct: 516 ELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMV 573
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 78/137 (56%)
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I Y ++ D+ +++ M+ ++ SVL C + S LG+++HG +VK G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
F FV NAL++MY + GS+ A F++I +KDV+SW+TMI Y R G +AL L
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 497 SMKTVGIKPDDITMVGI 513
M + +KP +I M+ I
Sbjct: 215 DMHVMRVKPSEIGMISI 231
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
D+ W+ I+++ +N C D A +F M P ++ MI G L+ +
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAK--AGSLEMGKW 450
Query: 114 VFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ + ++ D++ + Y + A LF RD+ WN M+SG+A +G+
Sbjct: 451 IHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGH 510
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWN 220
+AA +F+ M + N+I++ G L A +G ++E LF E +V +
Sbjct: 511 GEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYG 570
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
++ + L +A + MP+R ++
Sbjct: 571 CMVDLLGRAGLLDEAHELIKSMPMRPNIA 599
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/589 (40%), Positives = 345/589 (58%), Gaps = 11/589 (1%)
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-----PVRDEVSWNTMIT 255
++ AC LF N +V N+L+ G + R D+ F M D S+ ++
Sbjct: 55 LDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVK 114
Query: 256 GYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
A + +L +A V +F T ++S Y + G V AR +FD MPE N ++
Sbjct: 115 AAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIA 174
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
WNAM+ + M RELF+ M +N+ SWN M+ GY ++GE+ AR +F MP D
Sbjct: 175 WNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDD 234
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+SW+ +I G+A +GY E++ F E++R G R N + T VLS CA +LE GK LHG
Sbjct: 235 VSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGF 294
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKDVISWNTMIAGYARHGFGKD 490
+ K G V NALL Y KCG+V A FE I+ +++++SW +M+A A HG G++
Sbjct: 295 IEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEE 354
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
A+ +F M+ GI+PD+I + +L ACSH GLVE+G EYF M Y + P+ +HY CMV
Sbjct: 355 AIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMV 414
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DL GRAG+L +A + MP A W LLGAC ++G +LAE+ E + E++P N+
Sbjct: 415 DLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSS 474
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
+VLLSN YA +G+W D + VR M ++ + K G+S +EV ++TF G + +
Sbjct: 475 DHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEE 534
Query: 671 IYAYLEELEFKLK-QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
Y L+E+ +L+ + G+V VLHD+ EEEKE + HSEKLAVA+GI + GR I
Sbjct: 535 AYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTI 594
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R++KNLR+C DCH +K IS+I I++RD +RFH F G CSC DYW
Sbjct: 595 RIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 162/322 (50%), Gaps = 19/322 (5%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I+ + G A VF+ MP +++++NAM++ G + R++FD MP R+L+SWN
Sbjct: 148 ISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWN 207
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK---- 183
VM++GY + L AR +F MP +D VSW+TM+ G+A NGY + A F + K
Sbjct: 208 VMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRP 267
Query: 184 NEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
NE S G+L+A Q G +E +L +S W V N+L+ + K + A+ +F
Sbjct: 268 NETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVF 327
Query: 240 DR-MPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKV 294
+R M R+ VSW +M+ A + + EA +F EE+ ++ D + +++ G V
Sbjct: 328 ERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLV 387
Query: 295 DEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA-SWNTMIT 348
++ FD M E + + M+ Y + ++ A E M A W T++
Sbjct: 388 EQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLG 447
Query: 349 GYAQSGEITHARNLFDRMPQHD 370
+ G++ A + +R+ + D
Sbjct: 448 ACSMHGDVKLAEQVKERLSELD 469
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 164/346 (47%), Gaps = 54/346 (15%)
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
T++S Y + G+ AR++FD M E N I+WN ++ A + G ++ LF+ ++
Sbjct: 145 TTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLM 204
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
SWN ++ G+ K L A+ +F MP++D+VSW+TMI G+A N Y EA F E K
Sbjct: 205 SWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKG 264
Query: 278 V----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW-----NAMIAGYVQTKRMDMA 328
+ + T ++S Q G ++ + I EK+ ++W NA++ Y + + MA
Sbjct: 265 MRPNETSLTGVLSACAQAGALEFGK-ILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMA 323
Query: 329 RELFE-AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ +FE M +N+ SW +M +A A G+
Sbjct: 324 QLVFERIMNERNIVSWTSM-------------------------------MAALAMHGHG 352
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-----VKVGFEA-GC 441
E+++ +F +M+ G R + F S+L C++ +E G + ++ ++ E GC
Sbjct: 353 EEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGC 412
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
V +Y + G +++AY ++ + I W T++ + HG
Sbjct: 413 MVD-----LYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHG 453
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 149/309 (48%), Gaps = 19/309 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+IS Y G + AR+VFD+MP+ + ++WN M++ R + R LF++MP R+++
Sbjct: 145 TTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLM 204
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANW 214
SWN ML+GY + G + AR +F M K+++SW+ ++ + NG EEA F E +
Sbjct: 205 SWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKG 264
Query: 215 EVVSWNSLMGGFVKQKRLGDAKW--IFDRMPVRDEVSW-----NTMITGYAQNNYLAEAQ 267
+ SL G + G ++ I + ++W N ++ Y++ + AQ
Sbjct: 265 MRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQ 324
Query: 268 RLFEEA-PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQT 322
+FE +++ +WT+M++ +G +EA IF M E + +++ +++
Sbjct: 325 LVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHA 384
Query: 323 KRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAA 376
++ E F+ M ++ + M+ Y ++G++ A +MP I W
Sbjct: 385 GLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRT 444
Query: 377 IIAGYAQSG 385
++ + G
Sbjct: 445 LLGACSMHG 453
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 138/335 (41%), Gaps = 69/335 (20%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS-PFTS 411
S + +A LF P D +I G +S +DSL FIEM+R S F
Sbjct: 52 SDSLDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAF 111
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD-- 469
++ ANL S+ +G QLH Q + G + FVG L+ MY +CG V A F+E+ +
Sbjct: 112 IVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPN 171
Query: 470 -----------------------------KDVISWNTMIAGY------------------ 482
++++SWN M+AGY
Sbjct: 172 AIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPM 231
Query: 483 -------------ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
A +G+ ++A F ++ G++P++ ++ G+LSAC+ G +E G +
Sbjct: 232 KDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFG-KI 290
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+ G+ ++D + G + AQ + + + E + +W +++ A ++G
Sbjct: 291 LHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHG 350
Query: 590 KTELAEKAAEVIFEMEPEN--AGMYVLLSNLYAAS 622
E+A + +ME +S LYA S
Sbjct: 351 H---GEEAIGIFHKMEESGIRPDEIAFISLLYACS 382
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 123/268 (45%), Gaps = 23/268 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WNV + + + G + A +F MP + VS++ MI G+ NG + A F ++
Sbjct: 202 NLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQ 261
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP---KRDVVSW-----NTMLSGYAQNGYAD 171
++ + ++G + + + A +++ ++ ++W N +L Y++ G
Sbjct: 262 RKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVL 321
Query: 172 AARRIFDRML-EKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLM--- 223
A+ +F+R++ E+N +SW ++AA +G EEA +F ES + +++ SL+
Sbjct: 322 MAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYAC 381
Query: 224 --GGFVKQ--KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DV 278
G V+Q + K +++ P + + M+ Y + L +A + P+
Sbjct: 382 SHAGLVEQGCEYFDKMKGMYNIEPSIEH--YGCMVDLYGRAGQLQKAYEFVCQMPIPCTA 439
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPE 306
W ++ +G V A + + + E
Sbjct: 440 IIWRTLLGACSMHGDVKLAEQVKERLSE 467
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG---SVEEAYHAFEEI 467
S+L+ C +L + KQ+H ++K+G E+ F+ LL +C S++ A F
Sbjct: 10 SLLNICKSLTTF---KQIHANVLKLGLESDPFIAGKLL-HHCAISLSDSLDYACRLFRYT 65
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK-PDDITMVGILSACSHTGLVEKG 526
+ DV NT+I G +D+L+ F M+ PD + I+ A ++ V G
Sbjct: 66 PNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVG 125
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ + +G+ + T ++ + G G + A+ + MP EP+A W A++ AC
Sbjct: 126 IQ-LHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMP-EPNAIAWNAMVTACC 183
Query: 587 LYGKTELAEKAAEVIFEMEP 606
G K +F++ P
Sbjct: 184 RGGDM----KGGRELFDLMP 199
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/586 (40%), Positives = 347/586 (59%), Gaps = 40/586 (6%)
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
GDA+ FD V+D V+W T+I+G A+ L +A+RL APV++V TWT ++SGY + G
Sbjct: 157 GDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAG 216
Query: 293 KVDEARMIFDAM------PEKNTV-------------SWNAMIAGYVQTKRMDM------ 327
+ EA F++M P++ TV ++ + V KRM M
Sbjct: 217 RAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVV 276
Query: 328 --------------ARELFEAM-TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
ARE+F+A+ + WN MI GY + G + AR+LFD+M HD I
Sbjct: 277 ALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVI 336
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
++ ++I GY G ++L LF +M+R+G + +L+ A+L +L G+ LH +
Sbjct: 337 TFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACI 396
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
+ E ++G ALL MY KCG VEEA AF+++ +DV +W+ MI G A +G GK AL
Sbjct: 397 EQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAAL 456
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
F MK G + +T + +L+ACSH+ L+++G YF M + + P +HY CM+DL
Sbjct: 457 EHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDL 516
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGR+G LDEA +L++ MP +P+A W ++L ACR++ +LA+ AA + ++EP +Y
Sbjct: 517 LGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVY 576
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
V + N+Y S +W D SK+R M RGVKK GYS + V +VH F VGD HP+ I
Sbjct: 577 VQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIV 636
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
+EE+ +LK G+ T + DV EEEKE L HSEKLA+A+G++S+ P+ ++
Sbjct: 637 VMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHII 696
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLRVCEDCH+AIK IS++ R II+RD +RFHHF GG CSC D+W
Sbjct: 697 KNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 168/357 (47%), Gaps = 17/357 (4%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
+P + + +I Y G AR+ FD+ +D+V+W +ISG + L AR L
Sbjct: 135 LPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLL 194
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIE 202
P R+VV+W ++SGY++ G A A F+ ML +E++ G+L+A Q +
Sbjct: 195 ARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLN 254
Query: 203 EACMLFESKANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPV-RDEVSWNTMITGY 257
C L + ++ + L+ + K G A+ +FD + R WN MI GY
Sbjct: 255 FGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGY 314
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
+ ++ A+ LF++ DV T+ ++++GY+ G++ EA ++F M + N +
Sbjct: 315 CKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMV 374
Query: 318 GYVQTK----RMDMARELF----EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
G + + R L + + ++V ++ Y + G + A F +M
Sbjct: 375 GLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR 434
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D +W+A+I G A +G + +L F MK G N + +VL+ C++ L+ G+
Sbjct: 435 DVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGR 491
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 167/360 (46%), Gaps = 37/360 (10%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+F A +V G++ A +P + + +I Y + AR F+ +
Sbjct: 109 LFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASV 168
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
K+V +W T+I+G A+ G + AR L R P + ++W +I+GY+++G + +++ F M
Sbjct: 169 KDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSM 228
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLH-----------GQLV--------KVG-- 436
G + +LS C L L G LH +LV K G
Sbjct: 229 LSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDT 288
Query: 437 ------FEA-----GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
F+A G NA++ YCK G V+ A F+++ D DVI++N++I GY
Sbjct: 289 GRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHG 348
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G ++AL+LF M+ G+ D+ TMVG+L+A + G + +G + + V +
Sbjct: 349 GRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRL-VERDVYL 407
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
T ++D+ + GR++EA K M D TW A++G G + + A E F M+
Sbjct: 408 GTALLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMIGGLAFNG---MGKAALEHFFWMK 463
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 170/431 (39%), Gaps = 64/431 (14%)
Query: 8 RQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVA 67
R LH++C ++ + SP + Y L +R A D+ W
Sbjct: 124 RMLHAACFRTLLPSAVPLIASPI-IHMYAELG-----LPGDARRAFDEASVKDVVAWTTV 177
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I+ + G D A + P R+ V++ +ISGY G+ A F+ M +
Sbjct: 178 ISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDE 237
Query: 128 VMISG---------------------------------------YVRNKSLSAARNLFEM 148
V + G Y + AR +F+
Sbjct: 238 VTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDA 297
Query: 149 MPK-RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
+ + R WN M+ GY + G+ D AR +FD+M + + I++N L+ Y+ GR+ EA +L
Sbjct: 298 LGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLL 357
Query: 208 FESKANWEVVSWN-SLMGGFVKQKRLGDAK-------WIFDRMPVRDEVSWNTMITGYAQ 259
F + + N +++G LG I R+ RD ++ Y +
Sbjct: 358 FTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMK 417
Query: 260 NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAM 315
+ EA F++ V+DV TW+AM+ G NG A F M N+V++ A+
Sbjct: 418 CGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAV 477
Query: 316 IAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMP-QH 369
+ + +D R F+ M + + MI +SG + A +L MP Q
Sbjct: 478 LTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQP 537
Query: 370 DCISWAAIIAG 380
+ + WA+I++
Sbjct: 538 NAVIWASILSA 548
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 178/415 (42%), Gaps = 72/415 (17%)
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
F+ + V++ +ISG G LD AR++ + P R++V+W +ISGY R + A
Sbjct: 163 FDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAV 222
Query: 144 NLFEMMPKR----DVVSWNTMLSG-----------------------------------Y 164
+ F M D V+ MLS Y
Sbjct: 223 DCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMY 282
Query: 165 AQNGYADAARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
A+ G AR +FD + + WN ++ Y + G ++ A LF+ + +V+++NSL+
Sbjct: 283 AKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLI 342
Query: 224 GGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEA--------QRLFE 271
G++ RL +A +F +M D + ++T A L + QRL E
Sbjct: 343 TGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVE 402
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+DV+ TA++ Y++ G+V+EA + F M ++ +W+AMI G A E
Sbjct: 403 ----RDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEH 458
Query: 332 FEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRM-------PQHDCISWAAIIAG 380
F M C N ++ ++T + S + R FD M PQ + + +I
Sbjct: 459 FFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIE--HYGCMIDL 516
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+SG ++++ L M + N + S+LS C +++L + L+K+
Sbjct: 517 LGRSGLLDEAMDLVQTMPM---QPNAVIWASILSACRVHKNVDLAQNAAHHLLKL 568
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR 121
+ WN I + + G D A +F+ M +++N++I+GY+ G+L A +F +M +
Sbjct: 305 QPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRH 364
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
L + N + G L+A+ +L G G A A I R++
Sbjct: 365 GLGADNFTMVGL-----LTASASL-----------------GALPQGRALHA-CIEQRLV 401
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF----VKQKRLGDAKW 237
E++ LL Y++ GR+EEA + F+ + +V +W++++GG + + L W
Sbjct: 402 ERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFW 461
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNG 292
+ + V++ ++T + + L E + F+E + + + M+ ++G
Sbjct: 462 MKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSG 521
Query: 293 KVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAR 329
+DEA + MP + N V W ++++ K +D+A+
Sbjct: 522 LLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQ 559
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/750 (33%), Positives = 401/750 (53%), Gaps = 93/750 (12%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+D W + ++ L+ AR +F+ +P D ++N ++ Y+ G AA ++ M
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 181 LE----KNEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
L N+ ++ +L A ++ GR A VS +L+ +++ R
Sbjct: 92 LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVS-TALIDLYIRCAR 150
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNN------------------------------ 261
G A+ +F +MP+RD V+WN M+ GYA +
Sbjct: 151 FGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210
Query: 262 YLAEAQRLFEEAPV-------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
LA+ LF+ + + V TA++ Y + ++ A +F MP +N
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAM------------------TCKNVASW------- 343
V+W+A+I G+V RM A LF+ M C ++A
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330
Query: 344 ---------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
N++++ YA++G I A FD + D IS+ A+++G Q+G +E
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++ +F +M+ + + S++ C++LA+L+ GK HG ++ G + N+L+
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG ++ + F+++ +DV+SWNTMIAGY HG GK+A LF MK G PDD+
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + +++ACSH+GLV +G +F +M YG++P +HY CMVDLL R G LDEA +++
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MP + D WGALLGACR++ +L ++ + +I ++ PE G +VLLSN+++A+GR+ +
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++VR+ + +G KK GYSW+E+ +H F GD HP IY L+ + +K+ G+
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQ 690
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T VL D+ EEEKE L YHSEKLA+A+G+LS+ + I V KNLRVC DCH AIK++
Sbjct: 691 ADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYM 750
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ + R II+RD NRFHHF G CSCG++W
Sbjct: 751 TLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/558 (23%), Positives = 225/558 (40%), Gaps = 132/558 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D +QW + H+ G A VF+ +P + +YNA+I Y G A ++ M
Sbjct: 33 DKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSML 92
Query: 119 -----PQR---------------------------------DLVSWNVMISGYVRNKSLS 140
P + DL +I Y+R
Sbjct: 93 RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFG 152
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNG-YADAARRIFDRM----LEKNEISWNGLLAAY 195
ARN+F MP RDVV+WN ML+GYA +G Y A + D L N + LL
Sbjct: 153 PARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLL 212
Query: 196 VQNG------RIEEACMLFESKANWE-VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
Q+G I C+ + N E V+ +L+ + K K+L A +F MPVR++V
Sbjct: 213 AQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV 272
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK-------------------------------- 276
+W+ +I G+ + + EA LF++ V+
Sbjct: 273 TWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHAL 332
Query: 277 --------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
D+ +++S Y + G ++EA M FD + K+T+S+ A+++G VQ + + A
Sbjct: 333 IAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEA 392
Query: 329 RELFEAM-----------------TCKNVASW----------------------NTMITG 349
+F+ M C ++A+ N++I
Sbjct: 393 FLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDM 452
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA+ G+I +R +FD+MP D +SW +IAGY G +++ LF+ MK G + F
Sbjct: 453 YAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTF 512
Query: 410 TSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI- 467
+++ C++ + GK + K G ++ + + G ++EAY + +
Sbjct: 513 ICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMP 572
Query: 468 VDKDVISWNTMIAGYARH 485
+ DV W ++ H
Sbjct: 573 LKADVRVWGALLGACRIH 590
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 261/746 (34%), Positives = 403/746 (54%), Gaps = 58/746 (7%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQ--RDLVSWNVMISGYVRNKSLSAARNLFE 147
+S++ NA+I Y G LD A +VF+ + Q RD+ SWN ++SG V+N A LF
Sbjct: 197 KSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFR 256
Query: 148 MMPK--------------------------RDV------------VSWNTMLSGYAQNGY 169
M R++ + N +L YA+ G
Sbjct: 257 GMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLVMYAKYGR 316
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE-------VVSWNSL 222
D+A R+F ++ EK+ ISWN +L+ YVQN EA F VVS +S
Sbjct: 317 VDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSA 376
Query: 223 MGGF--VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+G + R A I R+ +V NT++ Y + + + ++FE ++D +
Sbjct: 377 LGHLSRLNNGREFHAYAIKQRLHTDLQVG-NTLMDMYIKCGSIECSAKVFESMGIRDHIS 435
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
WT +++ + Q+ + EA + + ++ + + MI ++T + L + + C +
Sbjct: 436 WTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAI 495
Query: 341 ASW-------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ N +I Y + GE H+ NLF R+ + D +SW ++I +G ++ L
Sbjct: 496 RNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFL 555
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM++ + + S+L A L+SL GKQ+HG L++ F V ++L+ MY
Sbjct: 556 FTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSG 615
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CGS+ A FE KDV+ W MI HG GK A+ LF+ M G+ PD ++ + +
Sbjct: 616 CGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLAL 675
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L ACSH+ LVE+G Y M Y + P +HY C+VD+LGR+G+ +EA +K MP +P
Sbjct: 676 LYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDP 735
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+A W ALLGACR++ LA AA + E+EP+N G Y+L+SN++A G+W + + R
Sbjct: 736 KSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRT 795
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD-GFVYSTK 692
+M +RG++K SW+E+ N +HTF+ GD H + + I+ L E+ L+++ G+V T+
Sbjct: 796 RMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTR 855
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VLHD EEEK ML HSE++A+A+G++S G PIR+ KNLRVC DCH K +SK+
Sbjct: 856 FVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLF 915
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R I++RD NRFHHFSGGSCSC D+W
Sbjct: 916 ERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 177/375 (47%), Gaps = 50/375 (13%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
D F T +V Y + G+VD+AR +F+ MP + SWNA++ Y+ + A ++ AM
Sbjct: 94 DGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMR 153
Query: 336 -------------------TC----------------------KNVASWNTMITGYAQSG 354
C K+ N +I YA+ G
Sbjct: 154 ASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCG 213
Query: 355 EITHARNLFDRMPQ--HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
+ A +F+ + Q D SW ++++G Q+G + ++L LF M+ G +N +V
Sbjct: 214 LLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAV 273
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L CA L L LG++LH L+K G E NALLVMY K G V+ A F +I +KD
Sbjct: 274 LQVCAELGLLSLGRELHAALLKCGSELN-IQCNALLVMYAKYGRVDSALRVFGQIAEKDY 332
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
ISWN+M++ Y ++ F +A+ F M G +PD +V + SA H + G E F++
Sbjct: 333 ISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGRE-FHA 391
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ + + ++D+ + G ++ + + ++M D +W +L AC + ++
Sbjct: 392 YAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIR-DHISWTTIL-AC--FAQSS 447
Query: 593 LAEKAAEVIFEMEPE 607
+A E+I E++ E
Sbjct: 448 RHSEALEMILELQKE 462
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 16/283 (5%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY---GE 402
++ Y + G + AR LF+ MP SW A++ Y SG + +++R++ M+ G
Sbjct: 101 LVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGS 160
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ SVL C G ++HG VKVG + V NAL+ MY KCG ++ A
Sbjct: 161 APDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALR 220
Query: 463 AFEEIVD--KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
FE + +DV SWN++++G ++G +AL LF M++ G + T V +L C+
Sbjct: 221 VFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAEL 280
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
GL+ G E ++ + G N + +V + + GR+D A + + E D +W +
Sbjct: 281 GLLSLGRELHAALLK-CGSELNIQCNALLV-MYAKYGRVDSALRVFGQIA-EKDYISWNS 337
Query: 581 LLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSNL 618
+L Y + +A + EM +P++A + L S L
Sbjct: 338 MLSC---YVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSAL 377
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 187/462 (40%), Gaps = 96/462 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM-----PRRS----------------------- 91
D+ WN ++ ++NG AL +F M P S
Sbjct: 231 DVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELH 290
Query: 92 ----------SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
++ NA++ Y G++D A +VF Q+ ++D +SWN M+S YV+N +
Sbjct: 291 AALLKCGSELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAE 350
Query: 142 ARNLFEMMPKR---------------------------------------DVVSWNTMLS 162
A + F M + D+ NT++
Sbjct: 351 AIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMD 410
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-MLFESKANWEVVSWNS 221
Y + G + + ++F+ M ++ ISW +LA + Q+ R EA M+ E + E + +S
Sbjct: 411 MYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQK--EGIMVDS 468
Query: 222 LMGGFVKQKRLG--------DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
+M G + + G R + D + N +I Y + + LF+
Sbjct: 469 MMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRV 528
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMAR 329
KD+ +WT+M++ NG+++ A +F M + N +V+ +++ + +
Sbjct: 529 EKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGK 588
Query: 330 ELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ + +N ++++ Y+ G + +A +F+R D + W A+I G
Sbjct: 589 QVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHG 648
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ + ++ LF M + G + F ++L C++ +E GK
Sbjct: 649 HGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKH 690
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 425 GKQLHGQLVKVGF---EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
G+Q+H V G + F+ L+ MY +CG V++A F + + V SWN ++
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 482 YARHGFGKDALMLFESMKTV---GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
Y G +A+ ++ +M+ G PD T+ +L AC G G E + + G
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGE-VHGLAVKVG 194
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP-DAATWGALLGACRLYGKT 591
+ ++ ++ + + G LD A + + + + D A+W +++ C G+T
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRT 248
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 271/826 (32%), Positives = 423/826 (51%), Gaps = 112/826 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-----SYNAMISGYLLNGQLDPARQV 114
++ QWN I+++ RN D L F M + + +Y +I + V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 115 FDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ + LV N ++S Y + ++ A LF++MP+R++VSWN+M+ ++ NG++
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 171 DAARRIFDRMLEKN-----------------------EI-------SW------------ 188
+ + + M+E+N EI W
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 189 -NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF------------VKQKRLG-- 233
N L+ Y + G I A M+F+ N VVSWN+++GGF ++Q G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 234 ----DAKWIFDRMP-----------------------VRDEVSWNTMITGYAQNNYLAEA 266
D I + +P V +E+ N + YA+ L+ A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA---------MPEKNTVSWNAMIA 317
QR+F K V +W A++ G+ Q+ ++ R+ DA +P+ TV ++++
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQS---NDPRLSLDAHLQMKISGLLPDSFTVC--SLLS 504
Query: 318 GYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+ K + + +E+ + +++ + ++++ Y GE+ + LFD M +S
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +I GY Q+G+ + +L +F +M YG +L V C+ L SL LG++ H +
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K E F+ +L+ MY K GS+ ++ F + +K SWN MI GY HG K+A+
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LFE M+ G PDD+T +G+L+AC+H+GL+ +G Y M +G+ PN KHY C++D+L
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 554 GRAGRLDEAQNLM-KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
GRAG+LD+A ++ + M E D W +LL +CR++ E+ EK A +FE+EPE Y
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSNLYA G+W DV KVR +M + ++K G SW+E+ KV +F VG+ + I
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 864
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
+ LE K+ + G+ T V HD+ EEEK LR HSEKLA+ YG++ G IRV
Sbjct: 865 SLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVY 924
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLR+C DCHNA K ISK++ R I++RDN RFHHF G CSCGDYW
Sbjct: 925 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/583 (24%), Positives = 263/583 (45%), Gaps = 75/583 (12%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-- 146
R V +I+ Y + G D +R VFD + ++L WN +IS Y RN+ F
Sbjct: 117 RNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 147 -----EMMPK---------------------------------RDVVSWNTMLSGYAQNG 168
+++P DV N ++S Y +G
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--------ESKANWEVVSWN 220
+ A ++FD M E+N +SWN ++ + NG EE+ +L + +V +
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 221 SLMGGFVKQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
+++ +++ +G K W ++ V N ++ Y++ + AQ +F+ K
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 277 DVFTWTAMVSGYV----QNGKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMA 328
+V +W MV G+ +G D R + D ++ T+ NA+ + ++ +
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI-LNAVPVCFHES-FLPSL 414
Query: 329 REL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+EL + N N + YA+ G +++A+ +F + SW A+I G+AQS
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
SL ++MK G + S+LS C+ L SL LGK++HG +++ E FV
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
++L +Y CG + F+ + DK ++SWNT+I GY ++GF AL +F M GI+
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 505 PDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTC-MVDLLGRAGRLDEA 562
I+M+ + ACS + G E + Y++ ++ + C ++D+ + G + ++
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKH---LLEDDAFIACSLIDMYAKNGSITQS 651
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ + E A+W A++ YG LA++A ++ EM+
Sbjct: 652 SKVFNGLK-EKSTASWNAMIMG---YGIHGLAKEAIKLFEEMQ 690
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 203/494 (41%), Gaps = 90/494 (18%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWN----------VMISGYVRNKSLSAARNLFEM 148
IS + G LD + + + D S + +++ + K + R + ++
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 149 MP-----KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+ + D V +++ YA G D +R +FD + KN WN ++++Y +N +E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY- 262
F E++S D +P D ++ +I A +
Sbjct: 170 VLETF-----IEMISTT-------------------DLLP--DHFTYPCVIKACAGMSDV 203
Query: 263 ---LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA-- 317
LA + + V+DVF A+VS Y +G V +A +FD MPE+N VSWN+MI
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 318 ---GYVQTKRM----------------DMARELFEAMTC---------KNVASW------ 343
G+ + + D+A + C K V W
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
N ++ Y++ G IT+A+ +F + +SW ++ G++ G + + + +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 397 MKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M GE + T + + C + + L K+LH +K F V NA + Y KC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GS+ A F I K V SWN +I G+A+ + +L MK G+ PD T+ +L
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 515 SACSHTGLVEKGTE 528
SACS + G E
Sbjct: 504 SACSKLKSLRLGKE 517
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQ 113
D + WN IT +++NG D AL VF M + +S + L L R+
Sbjct: 559 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
Query: 114 ----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ + D +I Y +N S++ + +F + ++ SWN M+ GY +G
Sbjct: 619 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA 204
A A ++F+ M +++++ G+L A +G I E
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 717
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/541 (41%), Positives = 343/541 (63%), Gaps = 9/541 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D V NT++ YA+ L EA+++FE+ P +D TWT ++SGY Q+ + +A + F+ M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 306 E----KNTVSWNAMIAGYVQTKRMDMARELFE-AMTC---KNVASWNTMITGYAQSGEIT 357
N + +++I +R +L + C NV + ++ Y + G +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A+ +FD + + +SW A+IAG+A+ +E +L LF M R G R + + S+ C+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ LE GK +H ++K G + F GN LL MY K GS+ +A F+ + +DV+SWN+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
++ YA+HGFGK+A+ FE M+ VGI+P++I+ + +L+ACSH+GL+++G Y+ M +D
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD- 392
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G++P + HY +VDLLGRAG L+ A ++ MP EP AA W ALL ACR++ TEL A
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE +FE++P++ G +V+L N+YA+ GRW D ++VR KM++ GVKK SW+E++N +H
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 512
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP+++ I EE+ K+K+ G+V T V+ V ++E+E L+YHSEK+A+A
Sbjct: 513 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+ +L+ P G I + KN+RVC DCH AIK SK+VGR II+RD NRFHHF G+CSC DY
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDY 632
Query: 778 W 778
W
Sbjct: 633 W 633
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 153/353 (43%), Gaps = 56/353 (15%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ S+ R V N +++ Y G L+ AR+VF++MPQRD V+W +ISGY ++
Sbjct: 85 HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD 144
Query: 142 ARNLFEMMPK---------------------------------------RDVVSWNTMLS 162
A F M + +V + +L
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVS 218
Y + G D A+ +FD + +N++SWN L+A + + E+A LF+ S
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ SL G L KW+ M E + NT++ YA++ + +A+++F+
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
+DV +W ++++ Y Q+G EA F+ M N +S+ +++ + +D
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 331 LFEAMTCKNVA--SWN--TMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
+E M + +W+ T++ ++G++ A + MP + W A++
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 178/411 (43%), Gaps = 54/411 (13%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSY--NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
R GCC LH F S + +A++ Y G +D A+ VFD + R+ VSWN +I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 131 SGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNE- 185
+G+ R A LF+ M + S+ ++ + G+ + + + M++ E
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 186 ---ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD-- 240
+ N LL Y ++G I +A +F+ A +VVSWNSL+ + + +A W F+
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 241 -RMPVR-DEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKV 294
R+ +R +E+S+ +++T + + L E +E + V + + + +V + G +
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 295 DEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM----ARELFEA---MTCKNVASWNTM 346
+ A + MP E W A++ K ++ A +FE +V +N
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 347 ITG------------YAQSG----------EITHARNLF----DRMPQHDCIS--WAAII 378
+G +SG EI +A ++F +R PQ + I+ W ++
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
A + GY D+ + + + + +N + ++ L + G +H
Sbjct: 535 AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIH 585
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R + ++L C L G+ +H +++ F +GN LL MY KCGS+EEA F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E++ +D ++W T+I+GY++H DAL+ F M G P++ T+ ++ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + + G N + ++DL R G +D+AQ + + D +W AL+
Sbjct: 179 CGHQ-LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIAG 236
Query: 585 CRLYGKTELAEKAAEVI 601
+ + EKA E+
Sbjct: 237 ---HARRSGTEKALELF 250
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/740 (35%), Positives = 392/740 (52%), Gaps = 57/740 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFD--QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
NA+I+ Y G L AR +FD M + D VSWN +IS +V + A +LF M +
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVG 243
Query: 154 VVS----WNTMLSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEAC 205
V S + L G + I +L+ N + N L+A Y + GR+E+A
Sbjct: 244 VASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAG 303
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVS------------ 249
+FES + VSWN+L+ G V+ + DA F M D+VS
Sbjct: 304 RVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSG 363
Query: 250 -----------------------WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
NT++ YA+ + FE KD+ +WT +++
Sbjct: 364 NLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIA 423
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMARELFEAMTCKNVAS 342
GY QN EA +F + K MI ++ K + RE+ + +++A
Sbjct: 424 GYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLAD 483
Query: 343 ---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N ++ Y + G I +AR F+ + D +SW ++I +G ++L LF +K+
Sbjct: 484 IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
+ + S LS ANL+SL+ GK++HG L++ GF + ++L+ MY CG+VE
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
+ F + +D+I W +MI HG G A+ LF+ M + PD IT + +L ACSH
Sbjct: 604 SRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSH 663
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+GL+ +G +F M Y + P +HY CMVDLL R+ L+EA + ++NMP +P + W
Sbjct: 664 SGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWC 723
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
ALLGAC ++ EL E AA+ + + + EN+G Y L+SN++AA GRW DV +VRL+M+ G
Sbjct: 724 ALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNG 783
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL-KQDGFVYSTKLVLHDV 698
+KK G SW+EV NK+HTF D HP+ D IY L + L K+ G++ TK V H+V
Sbjct: 784 LKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNV 843
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
EEEK ML HSE+LA+ YG+L P G IR+ KNLR+C+DCH K S++ R +++
Sbjct: 844 SEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVV 903
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD NRFHHF G CSCGD+W
Sbjct: 904 RDANRFHHFERGLCSCGDFW 923
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 219/470 (46%), Gaps = 61/470 (12%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----D 246
L+ Y + G + +A +F+ + + SWN+LMG FV + +A ++ M V D
Sbjct: 85 LVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAID 144
Query: 247 EVSWNTMIT---GYAQNNYLAEAQRLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMIFD 302
++ +++ ++ AE + + + VF A+++ Y + G + AR++FD
Sbjct: 145 ACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFD 204
Query: 303 A--MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS------------------ 342
M +++TVSWN++I+ +V A LF M VAS
Sbjct: 205 GIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFV 264
Query: 343 ---------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
N +I YA+ G + A +F+ M D +SW +++G
Sbjct: 265 KLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGL 324
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
Q+ D+L F +M+ G++ ++ ++++ +L GK++H ++ G ++
Sbjct: 325 VQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNM 384
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
+GN L+ MY KC V+ HAFE + +KD+ISW T+IAGYA++ F +A+ LF ++
Sbjct: 385 QIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVK 444
Query: 502 GIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+ D + + +L ACS GL + + Y RD I +V++ G G
Sbjct: 445 GMDVDPMMIGSVLRACS--GLKSRNFIREIHGYVFKRDLADIMLQ---NAIVNVYGEVGH 499
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
+D A+ +++ D +W +++ C G L +A E+ + ++ N
Sbjct: 500 IDYARRAFESIR-SKDIVSWTSMITCCVHNG---LPVEALELFYSLKQTN 545
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 160/341 (46%), Gaps = 26/341 (7%)
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW--NTMITGYAQSGEITHAR 360
A P + + + ++ V K + ++L + +++++ ++ Y + G + A
Sbjct: 40 ATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSAFLATKLVLMYGKCGSLRDAV 99
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+FD M + SW A++ + SG +++ L+ +M+ G ++ F SVL C L
Sbjct: 100 KVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALG 159
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV--DKDVISWNTM 478
LG ++HG VK G+ FV NAL+ MY KCG + A F+ I+ +D +SWN++
Sbjct: 160 ESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSI 219
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I+ + G +AL LF M+ VG+ + T V L V+ G +G
Sbjct: 220 ISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI-------HG 272
Query: 539 VIPNSKHYT------CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ S H+ ++ + + GR+++A + ++M D +W LL + E
Sbjct: 273 AVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESM-LCRDYVSWNTLLSG---LVQNE 328
Query: 593 LAEKAAEVIFEMEPENAGM---YVLLSNLYAASGRWGDVSK 630
L A +M +N+G V + NL AASGR G++ K
Sbjct: 329 LYSDALNYFRDM--QNSGQKPDQVSVLNLIAASGRSGNLLK 367
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 191/437 (43%), Gaps = 44/437 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N I + + G + A VF SM R VS+N ++SG + N A F M
Sbjct: 282 DVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQ 341
Query: 119 ---PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYAD 171
+ D VS +I+ R+ +L + + + + S NT++ YA+
Sbjct: 342 NSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVK 401
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
F+ M EK+ ISW ++A Y QN EA LF K + + + +M G V +
Sbjct: 402 YMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFR-KVQVKGMDVDPMMIGSVLRAC 460
Query: 232 LGDAK---------WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
G ++F R + D + N ++ Y + ++ A+R FE KD+ +WT
Sbjct: 461 SGLKSRNFIREIHGYVFKR-DLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWT 519
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+M++ V NG EA +F ++ + N +++ + ++ + +E+ + K
Sbjct: 520 SMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK 579
Query: 339 N------VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+AS +++ YA G + ++R +F + Q D I W ++I G ++
Sbjct: 580 GFFLEGPIAS--SLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIA 637
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-------GCFVGN 445
LF +M + F ++L C++ + GK+ +++K G++ C V
Sbjct: 638 LFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFF-EIMKYGYQLEPWPEHYACMVD- 695
Query: 446 ALLVMYCKCGSVEEAYH 462
+ + S+EEAYH
Sbjct: 696 ----LLSRSNSLEEAYH 708
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 150/359 (41%), Gaps = 60/359 (16%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D +++ N + + + C H F M + +S+ +I+GY N A +F +
Sbjct: 381 DSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRK 440
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KR---DVVSWNTMLSGYAQNGYA 170
+ + + +MI +R S +RN + KR D++ N +++ Y + G+
Sbjct: 441 VQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHI 500
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
D ARR F+ + K+ +SW ++ V NG EA LF S +KQ
Sbjct: 501 DYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS----------------LKQT 544
Query: 231 RL-GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
+ D+ I + +S ++ G + +L + F E P+ +++V Y
Sbjct: 545 NIQPDSIAIISALSATANLS--SLKKGKEIHGFLIR-KGFFLEGPIA-----SSLVDMYA 596
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
G V+ +R +F ++ +++ + W +MI + A LF+ MT +NV
Sbjct: 597 CCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNV--------- 647
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+P H I++ A++ + SG + R F E+ +YG +L P
Sbjct: 648 ----------------IPDH--ITFLALLYACSHSGLMVEGKRFF-EIMKYGYQLEPWP 687
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/702 (34%), Positives = 399/702 (56%), Gaps = 57/702 (8%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
++S Y G L R+VFD M ++++ WN M+S Y + + LF++M ++ +
Sbjct: 140 LVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI--- 196
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK----AN 213
+ ++A +FD++ +++ ISWN +++ YV NG E +++ +
Sbjct: 197 --------EGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGID 248
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWI--------FDRMPVRDEVSWNTMITGYAQNNYLAE 265
++ + S++ G L K + F+R R S NT++ Y++ L
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFER---RINFS-NTLLDMYSKCGDLDG 304
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
A R+FE+ ++V +WT+M++GY ++G+ D A + M ++ + V+ +++ +
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACAR 364
Query: 322 TKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ +D +++ + + N+ S N ++ Y + G + A ++F M D ISW +
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTM 424
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I E+K + +L CA+L++LE GK++HG +++ G+
Sbjct: 425 IG----------------ELKP-----DSRTMACILPACASLSALERGKEIHGYILRNGY 463
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ V NAL+ +Y KCG + A F+ I KD++SW MI+GY HG+G +A+ F
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNE 523
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ GI+PD+++ + IL ACSH+GL+E+G +FY M D+ + P +HY CMVDLL R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
L +A ++ +P PDA WGALL CR+Y ELAEK AE +FE+EPEN G YVLL+N
Sbjct: 584 NLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLAN 643
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG-DTLHPEKDRIYAYLE 676
+YA + +W +V ++R K+ +G++K G SW+E++ KV+ F G ++ HP +I + L+
Sbjct: 644 IYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLK 703
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
++ K+K++G+ TK L + E +KE L HSEKLA+A+G+L++P + +RV KNLR
Sbjct: 704 KMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLR 763
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC DCH K +SK R I+LRD+NRFHHF G CSC +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 165/360 (45%), Gaps = 40/360 (11%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGY 133
+SA +F+ + R +S+N+MISGY+ NG + +++ QM DL + ++ G
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGC 261
Query: 134 VRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ +LS + + + K R + NT+L Y++ G D A R+F++M E+N +SW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 190 GLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A Y ++GR + A L + +VV+ S++ + L + K + D +
Sbjct: 322 SMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKAN 381
Query: 246 DEVS----WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS--------------- 286
+ S N ++ Y + + A +F VKD+ +W M+
Sbjct: 382 NMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPA 441
Query: 287 ----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
++ GK ++ + V+ NA++ YV+ + +AR LF+ + K++ S
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVA-NALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
W MI+GY G A F+ M + D +S+ +I+ + SG E R F MK
Sbjct: 501 WTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 166/401 (41%), Gaps = 81/401 (20%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM------------------------------ 87
D D+ WN I+ ++ NG + L ++ M
Sbjct: 213 DRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKA 272
Query: 88 ----------PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
RR + S N ++ Y G LD A +VF++M +R++VSW MI+GY R+
Sbjct: 273 VHSLAIKSTFERRINFS-NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG 331
Query: 138 SLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWN 189
A L + M K DVV+ ++L A++G D + + D + +E N N
Sbjct: 332 RSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCN 391
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR--------------LGDA 235
L+ Y + G ++ A +F + +++SWN+++G R L
Sbjct: 392 ALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERG 451
Query: 236 K----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
K +I D N ++ Y + L A+ LF+ P KD+ +WT M+SGY +
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMH 511
Query: 292 GKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-------V 340
G +EA F DA E + VS+ +++ + ++ F M KN +
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM--KNDFNIEPKL 569
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ M+ +++G ++ A + +P D W A++ G
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 133/353 (37%), Gaps = 103/353 (29%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR---------SSVSY------------ 95
G+ ++ W I + R+G D A+ + M + +S+ +
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGK 372
Query: 96 ------------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG----- 132
NA++ Y G +D A VF M +D++SWN MI
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDS 432
Query: 133 --------------------------------------------YVRNKSLSAARNLFEM 148
YV+ L AR LF+M
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA 204
+P +D+VSW M+SGY +GY + A F+ M +E +E+S+ +L A +G +E+
Sbjct: 493 IPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
Query: 205 CMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG-- 256
F N ++ + ++ + L A + +P+ D W ++ G
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCR 612
Query: 257 YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+ LAE A+R+FE P ++ + + + Y + K +E + + + + +K
Sbjct: 613 IYHDIELAEKVAERVFELEP-ENTGYYVLLANIYAEAEKWEEVKRMREKIGKK 664
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/538 (44%), Positives = 332/538 (61%), Gaps = 16/538 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ-NGKVDEARMIFDAMPEKNT 309
N++++ YA+ L +A RLF+ P ++V TWT +V+ +G+ +EA AM ++
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAM-WRDG 177
Query: 310 VSWNAM----IAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHAR 360
V+ NA + G T + A A T K +V +++I Y + G++ R
Sbjct: 178 VAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGR 234
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+FD M D + W +IIAG+AQSG ++ LF+ MK G N+ TSVL C +
Sbjct: 235 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMV 294
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
LE G+Q+H ++K +E + NALL MYCKCGS+E+A F + +DVISW+TMI+
Sbjct: 295 MLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMIS 352
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G A++G +AL +F+ MK+ G+ P+ ITMVG+L ACSH GLVE G YF SM + +G+
Sbjct: 353 GLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQ 412
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P +H+ CMVDLLGRAG+LDEA +++M EPDA W LLGACR++ LA AA
Sbjct: 413 PEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAARE 472
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
I ++EP++ G VLLSN YA +W D K MRDRG+KK G SW+E++ VH F
Sbjct: 473 ILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIA 532
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HP D I L L ++ G+V T+ VL D+ E+KE +L+YHSEK+A+A+G
Sbjct: 533 GDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGT 592
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ G+PIR+MKNLR+C DCH K +SK GR+II+RD RFHHF G+CSCGDYW
Sbjct: 593 MHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 159/364 (43%), Gaps = 47/364 (12%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N L++ Y + G +++A LF+ VV+W +++ + F RD V
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGV 178
Query: 249 SWN-----TMITGYAQNNYLAEAQRLFEEAPV-KDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ N +++ LA + + DVF ++++ Y++ G +D R +FD
Sbjct: 179 APNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFD 238
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TC-------- 337
M ++ V WN++IAG+ Q+ A ELF M C
Sbjct: 239 EMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEA 298
Query: 338 ------------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+++ N ++ Y + G + A LF RMPQ D ISW+ +I+G AQ+G
Sbjct: 299 GRQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNG 358
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVG 444
S ++LR+F MK G NR VL C++ +E G + K+ G +
Sbjct: 359 KSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHH 418
Query: 445 NALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
N ++ + + G ++EA ++ ++ D + W T++ H G L + + + + +
Sbjct: 419 NCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGN--LAAYAAREILKL 476
Query: 504 KPDD 507
+PDD
Sbjct: 477 EPDD 480
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 150/342 (43%), Gaps = 65/342 (19%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL-LNGQLDPARQVFDQMPQRDL 123
N ++ + + G D AL +F+ MP R+ V++ +++ +G+ + A + M RD
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAM-WRDG 177
Query: 124 VSWNV-------------------------------------MISGYVRNKSLSAARNLF 146
V+ N +I Y++ L R +F
Sbjct: 178 VAPNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVF 237
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA-----YVQ 197
+ M RD+V WN++++G+AQ+G A +F RM N+ + +L A ++
Sbjct: 238 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLE 297
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
GR A +L K +++ N+L+ + K L DA+ +F RMP RD +SW+TMI+G
Sbjct: 298 AGRQVHAHVL---KYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGL 354
Query: 258 AQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEA-------RMIFDAMPE 306
AQN AEA R+F+ E + T ++ G V++ + +F PE
Sbjct: 355 AQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPE 414
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
+ N M+ + ++D A E M + + W T++
Sbjct: 415 RE--HHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLL 454
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 22/252 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+++I Y+ G LD R+VFD+M RDLV WN +I+G+ ++ A LF M
Sbjct: 218 SSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFS 277
Query: 156 SWNTMLSGY--AQNGYA--DAARRIFDRML--EKNEISWNGLLAAYVQNGRIEEACMLFE 209
+ L+ A G +A R++ +L E++ I N LL Y + G +E+A LF
Sbjct: 278 ANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFH 337
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN--TMI--------TGYAQ 259
+V+SW++++ G + + +A +FD M + V+ N TM+ G +
Sbjct: 338 RMPQRDVISWSTMISGLAQNGKSAEALRVFDLMK-SEGVAPNRITMVGVLFACSHAGLVE 396
Query: 260 NN--YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-RMIFDAMPEKNTVSWNAMI 316
+ Y ++LF P ++ MV + GK+DEA I D E + V W ++
Sbjct: 397 DGWYYFRSMKKLFGIQPERE--HHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLL 454
Query: 317 AGYVQTKRMDMA 328
K ++A
Sbjct: 455 GACRMHKSGNLA 466
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 47/244 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ---------- 107
D D+ + I +M+ G D VF+ M R V +N++I+G+ +G
Sbjct: 211 DSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMR 270
Query: 108 -------------------------LDPARQVFDQMP--QRDLVSWNVMISGYVRNKSLS 140
L+ RQV + +RDL+ N ++ Y + SL
Sbjct: 271 MKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYERDLILHNALLDMYCKCGSLE 330
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A LF MP+RDV+SW+TM+SG AQNG + A R+FD M + N I+ G+L A
Sbjct: 331 DAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACS 390
Query: 197 QNGRIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDA-KWIFDRMPVRDEVSW 250
G +E+ F S E N ++ + +L +A ++I D D V W
Sbjct: 391 HAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIW 450
Query: 251 NTMI 254
T++
Sbjct: 451 RTLL 454
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 427 QLHGQLVKV--GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
+ HGQL G G FV N+L+ MY K G +++A F+ + +++V++W T++A A
Sbjct: 99 EAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALAN 158
Query: 485 -HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
G ++AL +M G+ P+ T +L AC G++ + D V S
Sbjct: 159 ADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRS 218
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
++D + G LD + + M D W +++ + ++ A E+
Sbjct: 219 S----LIDAYMKLGDLDGGRRVFDEM-VTRDLVVWNSIIAG---FAQSGDGVGAIELFMR 270
Query: 604 MEPE--NAGMYVLLSNLYAASG 623
M+ +A L S L A +G
Sbjct: 271 MKDAGFSANQGTLTSVLRACTG 292
>gi|357482291|ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 735
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/664 (36%), Positives = 379/664 (57%), Gaps = 53/664 (7%)
Query: 55 PAGDWDIR--QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P+G+ R W +T + ++G + A ++F+ MP R+ V+YNAM+S YL +G A+
Sbjct: 64 PSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAK 123
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+ FD MP+R++VSW M+SGY + AR +F+ MP+R+VVSWN+M+ G +NG +
Sbjct: 124 RFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEE 183
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
AR++FD +KN +SWN ++ YV+NGR+++A LF+ V++W S++ G+ + +
Sbjct: 184 ARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDV 243
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------------EEAPVKDVFT 280
+A +F MP ++ VSW MI G+A N + EA LF EE V V+
Sbjct: 244 NEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYA 303
Query: 281 WTAM-------------------------------VSGYVQNGKVDEARMIFDA-MPEKN 308
M V Y G +D AR +F+ M +
Sbjct: 304 CAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCD 363
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
S+N+MI GYVQ ++ A+ELF+ + +N +W MI+GY +G++ A NLFD MP
Sbjct: 364 DQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPD 423
Query: 369 --HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D I+W +I GY Q+ +++ LF EM G S + + ++A L+LG
Sbjct: 424 SDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGW 483
Query: 427 QLHGQLVKV--GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
QLH +K +E ++ N+L+ MY KCG +E+AY F + +D ISWN+MI G +
Sbjct: 484 QLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSD 543
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HG +AL ++E+M G+ PD +T +G+L+AC+H G V+KG E F M DY + P +
Sbjct: 544 HGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLE 603
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT--ELAEKAAEVIF 602
HY ++++LGRAGR+ +A+ + +P EP+ WGAL+G C L KT ++A +AA +
Sbjct: 604 HYVSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGL-SKTDADIARRAATRLL 662
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E++P NA +V L N+YAA+ R + + +R +MR +GV+K G SW+ V+ KVH FS GD
Sbjct: 663 ELDPLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCSWILVKGKVHAFSSGD 722
Query: 663 TLHP 666
L P
Sbjct: 723 RLDP 726
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 245/461 (53%), Gaps = 53/461 (11%)
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACMLFESKANW 214
+ L Y NG+ AR I N + W +L Y ++G +E+A LF+ +
Sbjct: 42 SQLLHYLTNGFLHEARTILHSFPSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHR 101
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+V++N+++ +++ AK FD MP R+ VSW M++GYA ++ +A+++F+E P
Sbjct: 102 NIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMP 161
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
++V +W +MV G ++NG ++EAR +FD P+KN VSWNAMI GYV+ RMD A++LF+
Sbjct: 162 ERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQ 221
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+ C+NV +W +MI+GY + G++ A LF MP+ + +SW A+I G+A +G+ ++L LF
Sbjct: 222 IECRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLF 281
Query: 395 IEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF---EAGCFVGNALLVM 450
++M + + N F S++ CA + LGKQLH Q++ + + C +G +L+ M
Sbjct: 282 LDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRM 341
Query: 451 YCKCGSVEEAYHAFE-EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
Y CG ++ A FE ++ + D S+N+MI GY + G A LF+++
Sbjct: 342 YSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVP---------- 391
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
I N +TCM+ AG++ +A NL +M
Sbjct: 392 ------------------------------IRNKIAWTCMISGYLSAGQVLKASNLFDDM 421
Query: 570 P-FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
P + D+ W ++ Y + EL +A + EM + A
Sbjct: 422 PDSDKDSIAWTLMIYG---YVQNELIAEAINLFAEMMAQGA 459
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/580 (39%), Positives = 346/580 (59%), Gaps = 22/580 (3%)
Query: 207 LFESKANWEVVSWNSLMGGF--VKQKRLGDAKWI--FDRMPVRDEVSWNTMITGYAQNNY 262
LF++ V SWN + G+ + +LG + ++ +R D ++ + G+ ++
Sbjct: 70 LFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVA 129
Query: 263 LAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
L + L + +VF A+++ Y G +D AR IFD + + V+WNAMI+G
Sbjct: 130 LQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISG 189
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + K K+V SW ++TG+ +G++ AR F +MP+ D +SW A+I
Sbjct: 190 YNRIK--------------KDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMI 235
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
GY + +++L LF EM+ + + SVL+ CA L +LELG+ + + K +
Sbjct: 236 DGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVK 295
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
FVGNAL+ MY KCG+VE A F + +D +W M+ G A +G G++AL +F M
Sbjct: 296 NDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQM 355
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
+ PD++T VG+LSAC+HTG+V++G ++F SM +G+ PN HY CMVDLLG+AG
Sbjct: 356 LKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGH 415
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L EA ++KNMP +P++ WGALLGACR++ E+AE+A E I E+EP N +YVL N+
Sbjct: 416 LKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNI 475
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
YAA +W + ++R M DRG+KK G S +E+ VH F GD HP+ IY L ++
Sbjct: 476 YAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKM 535
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
LK G+ +T V D+ EE+KE+ + HSEKLA+A+G+++ G IR++KNLR+C
Sbjct: 536 TSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMC 595
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+ K +SK+ R +I+RD RFHHF GSCSC DYW
Sbjct: 596 IDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 219/476 (46%), Gaps = 53/476 (11%)
Query: 77 CDSALHV--FNSMPRRSSVSYNAMISGYLLN-------GQLDPARQVFDQMPQRDLVSWN 127
C S H+ +S ++ + N +I +L+ G + ARQ+FD +P+ + SWN
Sbjct: 24 CKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWN 83
Query: 128 VMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM--- 180
+M GY R +L+ M +R D ++ + G+ ++ R + +
Sbjct: 84 IMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKY 143
Query: 181 -LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
L+ N + N L+ Y G I+ A +F+ +VV+WN+++ G+ + K
Sbjct: 144 GLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIK--------- 194
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+D +SW ++TG+ + A++ F + P +D +WTAM+ GY++ EA M
Sbjct: 195 -----KDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALM 249
Query: 300 IFDAM------PEKNTVSWNAMIAGYVQTKRMDMA---RELFEAMTCKN-VASWNTMITG 349
+F M P++ T+ +++ Q +++ R + KN N +I
Sbjct: 250 LFREMQTSKIKPDEFTMV--SVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDM 307
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G + A ++F+ +PQ D +W A++ G A +G E++L +F +M + + +
Sbjct: 308 YFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTY 367
Query: 410 TSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
VLS C + ++ GK+ + + G E ++ + K G ++EA+ + +
Sbjct: 368 VGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMP 427
Query: 469 DK-DVISWNTMIAGYARHGFGKDALMLFESMKTV-GIKPDD----ITMVGILSACS 518
K + I W ++ H KDA M +++ + ++P++ + I +AC+
Sbjct: 428 MKPNSIVWGALLGACRIH---KDAEMAERAIEQILELEPNNGAVYVLQCNIYAACN 480
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 132/334 (39%), Gaps = 84/334 (25%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN I+ + R ++ +S+ A+++G++ GQ+D AR+ F +MP
Sbjct: 179 DVVTWNAMISGYNR--------------IKKDVISWTAIVTGFVNTGQVDAARKYFHKMP 224
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAA-- 173
+RD VSW MI GY+R A LF M K D + ++L+ AQ G +
Sbjct: 225 ERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEW 284
Query: 174 -RRIFDRMLEKNE-ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
R D+ KN+ N L+ Y + G +E A
Sbjct: 285 IRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALS------------------------- 319
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSG 287
IF+ +P RD+ +W M+ G A N EA +F + + D T+ ++S
Sbjct: 320 ------IFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSA 373
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
G VDE + F +M ++ + N+A + M+
Sbjct: 374 CTHTGMVDEGKKFFASMTARHGIE--------------------------PNIAHYGCMV 407
Query: 348 TGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
++G + A + MP + + I W A++
Sbjct: 408 DLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGA 441
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC--KCGSVEEAY 461
+ +P S+ TC ++ L KQ+H + +K G + N +L C + G + A
Sbjct: 12 VTENPPLSLFETCKSMYHL---KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYAR 68
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ I + V SWN M GY+R K + L+ M +KPD T + + +
Sbjct: 69 QLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSV 128
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
++ G E + + YG+ N + ++++ G +D A+ + +M + D TW A+
Sbjct: 129 ALQLGRELHCHVVK-YGLDSNVFAHNALINMYSLCGLIDMARGIF-DMSCKSDVVTWNAM 186
Query: 582 L 582
+
Sbjct: 187 I 187
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/643 (36%), Positives = 379/643 (58%), Gaps = 24/643 (3%)
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
N+++ Y + G AR +FD M +N +SWN L+A Y+ G E +LF++ + +
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 218 SWNSLM----------GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
N + GG VK+ + +F V + + ++ Y++ +++ A
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEG-MQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELAL 172
Query: 268 RLFEEAP---VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYV 320
++ + P V D+F++ ++++ V++G+ +EA + M ++ + V++ ++
Sbjct: 173 QVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCA 232
Query: 321 QTKRMDM-----ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
Q + + + AR L + + +I Y + GE+ +ARN+FD + + + W
Sbjct: 233 QIRDLQLGLRVHARLLRGGLMFDEFVG-SMLIDMYGKCGEVLNARNVFDGLQNRNVVVWT 291
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A++ Y Q+GY E+SL LF M R G N F +L+ CA +A+L G LH ++ K+
Sbjct: 292 ALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKL 351
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
GF+ V NAL+ MY K GS++ +Y+ F +++ +D+I+WN MI GY+ HG GK AL +F
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ M + P+ +T +G+LSA SH GLV++G Y + R++ + P +HYTCMV LL R
Sbjct: 412 QDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSR 471
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
AG LDEA+N MK + D W LL AC ++ +L + AE + +M+P + G Y LL
Sbjct: 472 AGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLL 531
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
SN+YA + RW V +R MR+R +KK G SWL+++N +H F + HPE +IY +
Sbjct: 532 SNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKV 591
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
++L +K G+V + VLHDV +E+KE L YHSEKLA+AYG++ IP+ PIR++KNL
Sbjct: 592 QQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNL 651
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+C+DCH A+K ISK+ RLII+RD NRFHHF GSC+C D+W
Sbjct: 652 RMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 209/458 (45%), Gaps = 64/458 (13%)
Query: 85 NSMPRRSSVSY-NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
N S +S+ N+++ Y+ GQL AR +FD MP R++VSWNV+++GY+ +
Sbjct: 42 NQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVL 101
Query: 144 NLFEMM-------PKRDVVSW---------------------------------NTMLSG 163
LF+ M P V + + ++
Sbjct: 102 VLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHM 161
Query: 164 YAQNGYADAARRIFDRMLEK--NEI-SWNGLLAAYVQNGRIEEACMLFESKAN----WEV 216
Y++ + + A ++ D + + N+I S+N +L A V++GR EEA + + W+
Sbjct: 162 YSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDH 221
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
V++ +MG + + L + R+ + DE + +I Y + + A+ +F+
Sbjct: 222 VTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDG 281
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT--------VSWNAMIAGYVQTKR 324
++V WTA+++ Y+QNG +E+ +F M + T V NA AG +
Sbjct: 282 LQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNA-CAGIAALRH 340
Query: 325 MDMARELFEAMTCKN-VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
D+ E + KN V N +I Y++SG I + N+F M D I+W A+I GY+
Sbjct: 341 GDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSH 400
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCF 442
G + +L++F +M E N F VLS ++L ++ G L++ E G
Sbjct: 401 HGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLE 460
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMI 479
++ + + G ++EA + + V DV++W T++
Sbjct: 461 HYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLL 498
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 148/306 (48%), Gaps = 15/306 (4%)
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+++ N+++ Y + G++ ARNLFD MP + +SW ++AGY G + L LF M
Sbjct: 49 HISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMV 108
Query: 399 RYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
N FT+ LS C++ ++ G Q HG L K G +V +AL+ MY +C V
Sbjct: 109 SLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHV 168
Query: 458 EEAYHAFEEIVDK---DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
E A + + + D+ S+N+++ G G++A+ + M + D +T VG++
Sbjct: 169 ELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVM 228
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
C+ ++ G + R G++ + + ++D+ G+ G + A+N+ + +
Sbjct: 229 GLCAQIRDLQLGLRVHARLLRG-GLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQ-NRN 286
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPE----NAGMYVLLSNLYA--ASGRWGDV 628
W AL+ A Y + E++ + M+ E N + +L N A A+ R GD+
Sbjct: 287 VVVWTALMTA---YLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDL 343
Query: 629 SKVRLK 634
R++
Sbjct: 344 LHARVE 349
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 416 CANLASLELGKQLHGQLV---KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
CA++ L GK +H Q + + + N+L+ +Y KCG + A + F+ + ++V
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEKGTEYFY 531
+SWN ++AGY G + L+LF++M ++ P++ LSACSH G V++G + +
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQ-CH 140
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP--DAATWGALLGACRLYG 589
+ +G++ + + +V + R ++ A ++ +P E D ++ ++L A G
Sbjct: 141 GLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESG 200
Query: 590 KTELAEKAAEVIFEMEPE 607
+ E+A EV+ M E
Sbjct: 201 R---GEEAVEVLRRMVDE 215
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 131/285 (45%), Gaps = 29/285 (10%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN--- 105
+RN + ++ W +T +++NG + +L++F M R ++ N LLN
Sbjct: 275 ARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLP-NEYTFAVLLNACA 333
Query: 106 -------GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
G L AR V + ++ N +I+ Y ++ S+ ++ N+F M RD+++WN
Sbjct: 334 GIAALRHGDLLHAR-VEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWN 392
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIEEAC-----MLFE 209
M+ GY+ +G A ++F M+ E +++ G+L+AY G ++E ++
Sbjct: 393 AMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRN 452
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG-YAQNNYLAEAQ 267
K + + ++ + L +A+ V+ D V+W T++ + NY +
Sbjct: 453 FKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNY--DLG 510
Query: 268 RLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
R E+ ++ DV T+T + + Y + + D I M E+N
Sbjct: 511 RRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERN 555
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/687 (37%), Positives = 369/687 (53%), Gaps = 81/687 (11%)
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
AAR L R+ N ++ Y+++G A+ F R+ N SWN L+AAY QNG
Sbjct: 59 AARKL-----DRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGH 113
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
A LF W+ + + V+ +T +
Sbjct: 114 PRGAATLFH---------------------------WMCSQGVRPNAVTLSTALLACTAA 146
Query: 261 NYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
LA ++L E EA D +++++ Y + +++EA FD PEK+ V W AMI
Sbjct: 147 RNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMI 206
Query: 317 AGYVQTKRMDMARELFEAMTCKNV------------------------------------ 340
+ Y R A EL M + +
Sbjct: 207 SAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLD 266
Query: 341 ----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
T++ Y + G + AR + D MP +SW A+IA YAQ+G + +++ LF
Sbjct: 267 RSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQC 326
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCG 455
M G + SV+ +CA L +L LGK++H ++ F + NA++ MY KCG
Sbjct: 327 MDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCG 386
Query: 456 SVEEAYHAFE--EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVG 512
++E A FE + + V++W MI YA++G G++A+ LF+ M G +P+ +T +
Sbjct: 387 NLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLS 446
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM-KNMPF 571
+L ACSH G +E+ E+F SM D+GV P HY C+VDLLGRAGRL EA+ L+ ++ F
Sbjct: 447 VLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDF 506
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
E D W A L AC++ G E +++AA+ + E+EPEN VLLSN+YAA GR DV+++
Sbjct: 507 EADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARI 566
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R +M+ GVKK G SW+E+ N+VH F V D HP K IY+ LE L ++K+ G+V T
Sbjct: 567 RNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDT 626
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
K+VL DV EE+K +L YHSE+LA+A GI+S P G +RV+KNLRVC DCH A K IS+I
Sbjct: 627 KMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQI 686
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
VGR II+RD +RFHHF G CSCGDYW
Sbjct: 687 VGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 148/310 (47%), Gaps = 18/310 (5%)
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFD 364
TVS N + Q + +D R+L + + N N ++ Y++ G + A+ F
Sbjct: 32 TVSINDYASLLWQCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFG 91
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
R+ H+ SW ++A YAQ+G+ + LF M G R N ++ L C +L L
Sbjct: 92 RITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLAL 151
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G++L+ + E V ++L+ MY +C +EEA AF+ +KDV+ W MI+ YA
Sbjct: 152 GRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAH 211
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF-----YSMNRDYGV 539
+ AL L M GIK T V +L AC+ T + G + ++R V
Sbjct: 212 NWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTV 271
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ + +V+L G+ GR+D+A+ ++ MP + +W A++ A Y + A +A
Sbjct: 272 VAGT-----LVNLYGKCGRVDDARRVLDAMPVRT-SVSWTAMIAA---YAQNGNAAEAIN 322
Query: 600 VIFEMEPENA 609
+ M+ E A
Sbjct: 323 LFQCMDLEGA 332
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 171/411 (41%), Gaps = 95/411 (23%)
Query: 108 LDPARQVFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
LD R++ Q+ R L NV++ Y ++ SL A+ F + + SWN +++
Sbjct: 48 LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAA 107
Query: 164 YAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKAN--WEVV 217
YAQNG+ A +F M + N ++ + L A + L E A+ E+
Sbjct: 108 YAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEID 167
Query: 218 SW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--- 272
S +SL+ + + + + +A+ FDR P +D V W MI+ YA N + A L
Sbjct: 168 SHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDL 227
Query: 273 -----------------APVKDVFTWTA--------------------MVSGYVQNGKVD 295
A D+ A +V+ Y + G+VD
Sbjct: 228 EGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVD 287
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TC- 337
+AR + DAMP + +VSW AMIA Y Q A LF+ M +C
Sbjct: 288 DARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCA 347
Query: 338 ----------------------KNVASWNTMITGYAQSGEITHARNLFDRMP--QHDCIS 373
+++ N +IT Y + G + AR +F+ +P ++
Sbjct: 348 VLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVT 407
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLE 423
W A+I YAQ+G E+++ LF EM G NR F SVL C++L LE
Sbjct: 408 WTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLE 458
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 127/342 (37%), Gaps = 71/342 (20%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
A T +RNG + R S+V +++ Y G++D AR+V D MP R VSW
Sbjct: 245 ASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSW 304
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLE 182
MI+ Y +N + + A NLF+ M ++ +++ A G +RI R+
Sbjct: 305 TAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRS 364
Query: 183 KNEIS-----WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
S N ++ Y + G +E A +FE
Sbjct: 365 SPSFSQSLMLLNAVITMYGKCGNLELAREVFECVP------------------------- 399
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+ R V+W MI YAQN EA LF+E
Sbjct: 400 ----LRTRSVVTWTAMIRAYAQNGVGEEAIELFQE------------------------- 430
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQ 352
M+ D E N V++ +++ +++ A E F +M + ++ +
Sbjct: 431 -MLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGR 489
Query: 353 SGEITHARNLFDRMP--QHDCISWAAIIAGYAQSGYSEDSLR 392
+G + A L R + D + W A ++ +G E S R
Sbjct: 490 AGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQR 531
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/720 (35%), Positives = 402/720 (55%), Gaps = 57/720 (7%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNV 66
+R + + ++++H + + A +N P + + L + + + I Q N
Sbjct: 3 MRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTA-------IFQCNS 55
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
I+ H RNG A +F M RS VS+ AMIS Y NG++ A QVFD+MP R S+
Sbjct: 56 QISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 127 NVMISGYVRNK-SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-- 183
N MI+ ++NK L A LF +P+++ VS+ TM++G+ + G D A ++ K
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFR 175
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ ++ N LL+ Y++ G+ EA +F+ A EVVS +S++ G+ K R+ DA+ +FDRM
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK----------------------- 276
R+ ++W MI GY + + + LF +E VK
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 277 -------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
D+F +++S Y + G + EA+ +F M K++VSWN++I G VQ K
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
++ A ELFE M K++ SW MI G++ GEI+ LF MP+ D I+W A+I+ +
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVS 415
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+GY E++L F +M + N F+SVLS A+LA L G Q+HG++VK+ V
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
N+L+ MYCKCG+ +AY F I + +++S+NTMI+GY+ +GFGK AL LF +++ G
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ +T + +LSAC H G V+ G +YF SM Y + P HY CMVDLLGR+G LD+A
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
NL+ MP +P + WG+LL A + + + +LAE AA+ + E+EP++A YV+LS LY+ G
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+ D ++ + + +KK G SW+ ++ +VH F GD LEE+ F LK
Sbjct: 656 KNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLN-------LEEIGFTLK 708
>gi|224126355|ref|XP_002329533.1| predicted protein [Populus trichocarpa]
gi|222870242|gb|EEF07373.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/668 (35%), Positives = 370/668 (55%), Gaps = 45/668 (6%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P+ + I W +T + R G D + +F+ MP R+ VSYN M+SGYL G+L AR
Sbjct: 25 PERSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLSGYLQCGRLSEAR 84
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+F++MP+R++VSW M+ G + AR LF+ MP+R+VVSWN M++G +N +
Sbjct: 85 GLFEEMPERNVVSWTSMLCGLADAGRICEARELFKEMPERNVVSWNAMVAGLIKNEDLEE 144
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
ARR+FD + EKN +SWN ++ + +NG++EEA +LFE + V++W +++ G+ + +
Sbjct: 145 ARRVFDEIPEKNVVSWNAMIKGFAENGKMEEARVLFEEMEDRNVITWTTMIAGYCRIGDV 204
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-------APVKDVFTWTA-- 283
+A F R+P R+ VSW MI+G+ N Y EA LF E AP + F A
Sbjct: 205 REAYCFFCRIPERNVVSWTAMISGFTWNGYYGEALLLFLEMKRRSNIAPNGETFISLAYA 264
Query: 284 ----------------------------------MVSGYVQNGKVDEARMIFDAMPEKNT 309
++ Y G +D A +F+ +
Sbjct: 265 CAGMRFHHLGKQLHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHA 324
Query: 310 V-SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
V S N MI GY + +++ ARELF+ + ++ +W +MI GY G ++ A LF+ MP
Sbjct: 325 VQSCNHMINGYTRIGQVEKARELFDTIPARDNITWTSMIVGYFDIGNVSEACYLFENMPD 384
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D ++W ++I+G Q+ + + M +G S + + +A L+ G+QL
Sbjct: 385 KDSVAWTSMISGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGAIAHLDFGRQL 444
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H L+K + + N+L+ MY KCG + +AY F ++ +D+ISWNTMI G A H
Sbjct: 445 HNMLMKTLSDCDLILSNSLISMYAKCGEIHDAYSIFTNMIYRDLISWNTMIMGLAHHALA 504
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+ L +FE+M G +P+ +T +GILSACSH GLV +G + F +M Y + P +HY
Sbjct: 505 NETLKVFETMLQSGTRPNSVTFLGILSACSHAGLVSQGCKLFKAMRDVYAIQPGLEHYIS 564
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK-TELAEKAAEVIFEMEPE 607
M++LLGRAG++ EA+ L+ +PFE + A WGALLG C + K ++A+ AA + E++P
Sbjct: 565 MINLLGRAGKVREAEELILGLPFETNHAIWGALLGVCGVAEKNADIAQHAARRLLELDPL 624
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
NA +V L N+YAA G+ + K+R +M +GV+KV G SW+ + V F GD L PE
Sbjct: 625 NAPAHVALCNIYAACGKHIEEQKLRKEMGLKGVRKVPGCSWIVLNGNVCVFLSGDKLDPE 684
Query: 668 KDRIYAYL 675
D + +L
Sbjct: 685 ADEMLLFL 692
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 226/436 (51%), Gaps = 51/436 (11%)
Query: 173 ARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
AR + D+ E++ S W LL Y + G I+E+ +LF+ +VS+N ++ G+++
Sbjct: 17 ARNLLDKFPERSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLSGYLQ 76
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
RL +A+ +F+ MP R+ VSW +M+ G A + EA+ LF+E P ++V +W AMV+G
Sbjct: 77 CGRLSEARGLFEEMPERNVVSWTSMLCGLADAGRICEARELFKEMPERNVVSWNAMVAGL 136
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
++N ++EAR +FD +PEKN VSWNAMI G+ + +M+ AR LFE M +NV +W TMI
Sbjct: 137 IKNEDLEEARRVFDEIPEKNVVSWNAMIKGFAENGKMEEARVLFEEMEDRNVITWTTMIA 196
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
GY + G++ A F R+P+ + +SW A+I+G+ +GY ++L LF+EMKR R N +P
Sbjct: 197 GYCRIGDVREAYCFFCRIPERNVVSWTAMISGFTWNGYYGEALLLFLEMKR---RSNIAP 253
Query: 409 ----FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG-------------------- 444
F S+ CA + LGKQLH QL+ G E + G
Sbjct: 254 NGETFISLAYACAGMRFHHLGKQLHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAMDYAH 313
Query: 445 ---------------NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
N ++ Y + G VE+A F+ I +D I+W +MI GY G
Sbjct: 314 YVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIPARDNITWTSMIVGYFDIGNVS 373
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+A LFE+M D + ++S L K T + M +G P S Y +
Sbjct: 374 EACYLFENMP----DKDSVAWTSMISGLVQNELFLKATSFLLRM-LAHGAPPLSSTYAIL 428
Query: 550 VDLLGRAGRLDEAQNL 565
G LD + L
Sbjct: 429 FGAAGAIAHLDFGRQL 444
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 209/435 (48%), Gaps = 56/435 (12%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ 107
++R K + ++ WN + ++N + A VF+ +P ++ VS+NAMI G+ NG+
Sbjct: 113 EARELFKEMPERNVVSWNAMVAGLIKNEDLEEARRVFDEIPEKNVVSWNAMIKGFAENGK 172
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
++ AR +F++M R++++W MI+GY R + A F +P+R+VVSW M+SG+ N
Sbjct: 173 MEEARVLFEEMEDRNVITWTTMIAGYCRIGDVREAYCFFCRIPERNVVSWTAMISGFTWN 232
Query: 168 GYADAARRIFDRMLEKNEISWNG------------------------------------- 190
GY A +F M ++ I+ NG
Sbjct: 233 GYYGEALLLFLEMKRRSNIAPNGETFISLAYACAGMRFHHLGKQLHAQLIINGLEYEDYD 292
Query: 191 ------LLAAYVQNGRIEEACMLFESKANWEVV-SWNSLMGGFVKQKRLGDAKWIFDRMP 243
L+ Y G ++ A +F N V S N ++ G+ + ++ A+ +FD +P
Sbjct: 293 GRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIP 352
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-----R 298
RD ++W +MI GY ++EA LFE P KD WT+M+SG VQN +A R
Sbjct: 353 ARDNITWTSMIVGYFDIGNVSEACYLFENMPDKDSVAWTSMISGLVQNELFLKATSFLLR 412
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQS 353
M+ P ++ ++ + +D R+L + C + S N++I+ YA+
Sbjct: 413 MLAHGAPPLSS-TYAILFGAAGAIAHLDFGRQLHNMLMKTLSDCDLILS-NSLISMYAKC 470
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
GEI A ++F M D ISW +I G A + ++L++F M + G R N F +L
Sbjct: 471 GEIHDAYSIFTNMIYRDLISWNTMIMGLAHHALANETLKVFETMLQSGTRPNSVTFLGIL 530
Query: 414 STCANLASLELGKQL 428
S C++ + G +L
Sbjct: 531 SACSHAGLVSQGCKL 545
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/543 (41%), Positives = 326/543 (60%), Gaps = 39/543 (7%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V D T +++ Y + G+ D AR++FD M ++ VSWN MIAGY + A +LF
Sbjct: 89 VTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSR 148
Query: 335 M---------------TCKNVASW------------------------NTMITGYAQSGE 355
M C A + ++ YA+
Sbjct: 149 MHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNM 208
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I A +F++MP+ ++W+++ AGY Q+G E++L LF +R G L +++LS
Sbjct: 209 IKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSA 268
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA+LA G QLH ++K GF FV +L+ +Y +CG +E+AY F + K+V+ W
Sbjct: 269 CASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIW 328
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N MIA ++RH +A++LFE M+ +GI P+++T + +LS CSH GLVEKG YF +
Sbjct: 329 NAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMS 388
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
D V PN HY+CMVD+LGR+G+ DEA L+ MPFEP A+ WG+LLG+CR Y LA
Sbjct: 389 DRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLAR 448
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AAE +F++EP+N G +VLLSN+YAASG W +V R ++D G KK G SW+E + KV
Sbjct: 449 IAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKV 508
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F VG+ HP IY LEE+ ++++ S + LHDV E+KE +L++HSEKLA
Sbjct: 509 HVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLA 568
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+++G++S+P+ PI + KNLR+C DCH+ +K + I RL+I+RD NRFHHF GSCSCG
Sbjct: 569 LSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCG 628
Query: 776 DYW 778
D+W
Sbjct: 629 DFW 631
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 175/392 (44%), Gaps = 78/392 (19%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D ++ N++I+ Y + AR +F++M R +VSWNTM++GY +G A ++F RM
Sbjct: 91 DTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMH 150
Query: 182 EK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG-----FVKQKRL 232
+ +E + + + A I E C + A + NS +G + K +
Sbjct: 151 REGTHMSEFTLSSTICACAAKYAINE-CKQLHTIALKLALDSNSFVGTAILDVYAKCNMI 209
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSG- 287
DA W+F++MP R V+W+++ GY QN EA LF A + V FT +A++S
Sbjct: 210 KDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSAC 269
Query: 288 ----------------------------------YVQNGKVDEARMIFDAMPEKNTVSWN 313
Y + G++++A +F M KN V WN
Sbjct: 270 ASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWN 329
Query: 314 AMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLF-----D 364
AMIA + + A LFE M N ++ ++++ + +G + R+ F D
Sbjct: 330 AMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSD 389
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT-------SVLSTCA 417
R + + + ++ ++ +SG ++++ L LN+ PF S+L +C
Sbjct: 390 RTVEPNVLHYSCMVDVLGRSGKTDEAWEL----------LNKMPFEPTASMWGSLLGSCR 439
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
N ++ L + QL ++ + G GN +L+
Sbjct: 440 NYNNIRLARIAAEQLFQLEPDNG---GNHVLL 468
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 47/294 (15%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L + ++ N L+ Y + GR + A ++F+ +VSWN+++ G+ A +F
Sbjct: 88 LVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFS 147
Query: 241 RMPVR----DEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNG 292
RM E + ++ I A + E ++L + A + F TA++ Y +
Sbjct: 148 RMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCN 207
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV------------ 340
+ +A +F+ MPE+ V+W+++ AGYVQ + A LF + V
Sbjct: 208 MIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILS 267
Query: 341 --ASWNTMITG-------------------------YAQSGEITHARNLFDRMPQHDCIS 373
AS I G YA+ G+I A LF M + +
Sbjct: 268 ACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVI 327
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
W A+IA +++ +S +++ LF +M++ G N + SVLS C++ +E G+
Sbjct: 328 WNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRH 381
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
++ S + L CA SL +GK HG + G N L+ +Y KCG + A
Sbjct: 55 IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+ + + ++SWNTMIAGY G AL LF M G + T+ + AC+ +
Sbjct: 115 FDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAI 174
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+ + +++ + NS T ++D+ + + +A + + MP E TW +L
Sbjct: 175 NECKQ-LHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMP-ERTLVTWSSLFA 232
Query: 584 ACRLYGKTELAEKA 597
Y + L E+A
Sbjct: 233 G---YVQNGLHEEA 243
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/538 (43%), Positives = 330/538 (61%), Gaps = 16/538 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ-NGKVDEARMIFDAMPEKNT 309
N++ + YA+ L +A R+F+ PV++V TWT +V+ +G+ EA AM ++
Sbjct: 108 NSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAM-RRDG 166
Query: 310 VSWNAM----IAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHAR 360
V+ NA + G T M A A T K +V +++I Y + G++ R
Sbjct: 167 VAPNAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGR 223
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+FD M D + W +IIAG+AQSG ++ LF+ MK G N+ TSVL C +
Sbjct: 224 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMV 283
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
LE G+Q+H ++K ++ + NALL MYCKCGS+E+A F + +DVISW+TM++
Sbjct: 284 MLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVS 341
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G A++G +AL +F+ MK+ G+ P+ +TMVG+L ACSH GLVE G YF SM R +G+
Sbjct: 342 GLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQ 401
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P +H+ CMVDLLGRAG+LDEA + M EPD+ W LLGACR++ LA AA
Sbjct: 402 PEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAARE 461
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
I ++EP++ G VLLSN YA +W D K MRDRG++K G SW+E++ +VH F
Sbjct: 462 ILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIA 521
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HP D I L L ++K G+V T+ VL D+ E+KE +L+YHSEK+A+ +G
Sbjct: 522 GDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGT 581
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ G+PIR+MKNLR+C DCH K +SK GR+I++RD RFHHF G+CSCGDYW
Sbjct: 582 MHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 47/270 (17%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR--NKSLSAARNLFEMMPKRD 153
N++ S Y G LD A ++FD MP R++V+W +++ + A R L M +RD
Sbjct: 108 NSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAM--RRD 165
Query: 154 VVSWN-------------------------------------TMLSGYAQNGYADAARRI 176
V+ N +++ Y + G D RR+
Sbjct: 166 GVAPNAYTFSSVLGACTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRV 225
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS----WNSLMGGFVKQKRL 232
FD M+ ++ + WN ++A + Q+G A LF + S S++ L
Sbjct: 226 FDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVML 285
Query: 233 GDAKWIFDRMPV--RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
+ + + RD + N ++ Y + L +A LF P +DV +W+ MVSG Q
Sbjct: 286 EAGRQVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQ 345
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
NGK EA +FD M + + + G +
Sbjct: 346 NGKSVEALRVFDLMKSQGVAPNHVTMVGVL 375
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 41/198 (20%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ------ 107
K D D+ + I +++ G D VF+ M R V +N++I+G+ +G
Sbjct: 196 KAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIE 255
Query: 108 -----------------------------LDPARQVFDQMPQ--RDLVSWNVMISGYVRN 136
L+ RQV + + RDL+ N ++ Y +
Sbjct: 256 LFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDRDLILHNALLDMYCKC 315
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLL 192
SL A LF MP+RDV+SW+TM+SG AQNG + A R+FD M + N ++ G+L
Sbjct: 316 GSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVL 375
Query: 193 AAYVQNGRIEEACMLFES 210
A G +E+ F S
Sbjct: 376 FACSHAGLVEDGWHYFRS 393
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 22/232 (9%)
Query: 403 RLNRSPFTSVLSTCANLASLELGK------QLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
R + T ++ C + + G+ + HG L G G FV N+L MY K G
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDG-AGGLFVSNSLASMYAKFGL 119
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYAR-HGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+++A F+ + ++V++W T++A A G ++AL +M+ G+ P+ T +L
Sbjct: 120 LDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLG 179
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+ G++ D V S ++D + G LD + + M D
Sbjct: 180 ACTTPGMLTAVHASTVKAGLDSDVFVRSS----LIDAYVKLGDLDGGRRVFDEM-VTRDL 234
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY----VLLSNLYAASG 623
W +++ G + + + M ++AG L S L A +G
Sbjct: 235 VVWNSIIA-----GFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTG 281
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + G + A +F+ MP+R +S++ M+SG NG+ A +VFD
Sbjct: 299 DRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDL 358
Query: 118 MPQRDLVSWNVMISGYVRNKS-----------LSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
M + + +V + G + S + + LF + P+R+ N M+ +
Sbjct: 359 MKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPERE--HHNCMVDLLGR 416
Query: 167 NGYADAARRIFDRM-LEKNEISWNGLLAA 194
G D A M LE + + W LL A
Sbjct: 417 AGKLDEAVEFIHGMSLEPDSVIWRTLLGA 445
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/689 (37%), Positives = 393/689 (57%), Gaps = 49/689 (7%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSG 163
L A VF+ + + + + WN MI G+ + ++ L+ M ++ ++ +L
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 164 YAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
A++ ++I ++L + + L++ YVQN R+E+A +F+ ++ +VVS+
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV- 278
+L+ G+ + + A+ +FD +PV+D VSWN MI+GYA+ EA LFEE +V
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 279 ---FTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
T+ ++S +G ++ R + D + N NA+I Y + ++ A L
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F+ ++ K+V SWNT+I GY TH NL+ +++L
Sbjct: 254 FQGLSYKDVISWNTLIGGY------THM-NLY------------------------KEAL 282
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAGCFVGNALLV 449
LF EM R GE N SVL CA+L ++++G+ +H + K G + +L+
Sbjct: 283 LLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 342
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCG +E A+ F ++ K + SWN MI G+A HG + LF M+ +GI+PDDIT
Sbjct: 343 MYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDIT 402
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
VG+LSACSH+G+++ G F SM +DY + P +HY CM+DLLG +G EA+ ++ M
Sbjct: 403 FVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTM 462
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
EPD W +LL AC+++G ELAE A+ + ++EPEN Y+LLSN+YA++GRW DV+
Sbjct: 463 EMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVA 522
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
++R + + +KKV G S +EV + V F VGD HP+ IY LEE+E L++ GFV
Sbjct: 523 RIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVP 582
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
T VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A K +S
Sbjct: 583 DTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLS 642
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KI R I+ RD RFHHF G CSC DYW
Sbjct: 643 KIYKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 191/409 (46%), Gaps = 38/409 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ I+ +++N + A VF+ R VSY A+I+GY G + A+++FD+
Sbjct: 96 DLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDE 155
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAA 173
+P +D+VSWN MISGY A LFE M K +V ++ T+LS A +G +
Sbjct: 156 IPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELG 215
Query: 174 RRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R++ D + N N L+ Y + G +E AC LF+ + +V+SWN+L+GG+
Sbjct: 216 RQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHM 275
Query: 230 KRLGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFTW-- 281
+A +F M E + TM++ +L ++ + +K V
Sbjct: 276 NLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 335
Query: 282 --TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
T+++ Y + G ++ A +F++M K+ SWNAMI G+ R D + +LF M
Sbjct: 336 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 395
Query: 340 V----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDS 390
+ ++ +++ + SG + R++F M Q ++ + +I SG
Sbjct: 396 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG----- 450
Query: 391 LRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C ++EL + L+K+
Sbjct: 451 --LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKI 497
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/677 (36%), Positives = 375/677 (55%), Gaps = 32/677 (4%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG-----YAQNGYADAARRIFDRMLEK 183
++ + KS + L M ++ NT L+ YA G A IFD ++ K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ---KRLGDAKWIFD 240
N WN ++ Y NG ++ +L+ E++ + F K GD +
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYR-----EMLCFGQRADNFTYPFVLKACGDLLLVEI 179
Query: 241 RMPVRDEVS----------WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
V EV N+++ YA+ + A+ +F+ +D+ +W M+SGY +
Sbjct: 180 GRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAK 239
Query: 291 NGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN-- 344
N A ++FD M + + + +++ K + + + ++ ++N
Sbjct: 240 NADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKF 299
Query: 345 ---TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
++I Y + AR LF+R+ D +SW ++I GYA++G + +SLRLF M G
Sbjct: 300 FTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDG 359
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
++ F +VL C +A+L G +H LVK GF+A VG AL+ MY KCGS+ +
Sbjct: 360 SGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSR 419
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+E+ DK ++SW+ M+AGY HG G++A+ + + MK + PD+ ILSACSH G
Sbjct: 420 RVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAG 479
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV +G E FY M ++Y V P HY+CMVDLLGRAG LDEA +++ M +P + W AL
Sbjct: 480 LVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAAL 539
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
L A RL+ +LAE +A+ +F+M P+ Y+ LSN+YAA RW DV +VR +R +G+K
Sbjct: 540 LTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLK 599
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G S++E+ N VH F VGD H + + IYA L EL+ +LK+ G+ T LV +DV EE
Sbjct: 600 KSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEE 659
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
KE ML HSE+LA+A+ +++ G IR+ KNLRVC DCH K IS++ GR II+RD
Sbjct: 660 VKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDI 719
Query: 762 NRFHHFSGGSCSCGDYW 778
+RFHHF G CSCGDYW
Sbjct: 720 HRFHHFIKGFCSCGDYW 736
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 163/385 (42%), Gaps = 56/385 (14%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTML 161
G + A +FD + ++ WN MI GY N KSL R + + D ++ +L
Sbjct: 109 GLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVL 168
Query: 162 SGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
+ RR+ + LE + N LLA Y + G + A M+F+ A ++
Sbjct: 169 KACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLT 228
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRM----------------------------------P 243
SWN+++ G+ K G A +FD M
Sbjct: 229 SWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYA 288
Query: 244 VRDEVS------WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
VR+ + N++I Y N + +A+RLFE KD +W +M+ GY +NG E+
Sbjct: 289 VRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFES 348
Query: 298 RMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITG 349
+F M + V++ A++ Q + + + K N ++
Sbjct: 349 LRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDM 408
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y++ G + +R +FD MP +SW+A++AGY G +++ + MK + F
Sbjct: 409 YSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVF 468
Query: 410 TSVLSTCANLASLELGKQLHGQLVK 434
TS+LS C++ + GK++ ++ K
Sbjct: 469 TSILSACSHAGLVVEGKEIFYKMEK 493
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 176/367 (47%), Gaps = 33/367 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMIS--GYLLNGQLDPARQVFDQ 117
WN I + NG +L ++ M R + +Y ++ G LL ++ R+V +
Sbjct: 129 WNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLL--LVEIGRRVHSE 186
Query: 118 MP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+ + D+ N +++ Y + + AR +F+ M +RD+ SWNTM+SGYA+N + A
Sbjct: 187 VVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTA 246
Query: 174 RRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMG 224
+FD M L + + GLL+A V+ G++ + S N+ NSL+
Sbjct: 247 FLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIE 306
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFT 280
+ + DA+ +F+R+ +D VSWN+MI GYA+N E+ RLF + D T
Sbjct: 307 MYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVT 366
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ A++ Q + I + +K NT+ A++ Y + + +R +F+ M
Sbjct: 367 FIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMP 426
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS----WAAIIAGYAQSGYSEDSLR 392
K++ SW+ M+ GY G A ++ D M + I + +I++ + +G +
Sbjct: 427 DKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKE 486
Query: 393 LFIEMKR 399
+F +M++
Sbjct: 487 IFYKMEK 493
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 173/434 (39%), Gaps = 65/434 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI N + + + G +A VF+ M R S+N MISGY N A VFD M
Sbjct: 195 DIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMG 254
Query: 120 QRDLVS----------------------------------------WNVMISGYVRNKSL 139
+ L + N +I Y +
Sbjct: 255 KAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCM 314
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAY 195
AR LFE + +D VSWN+M+ GYA+NG A + R+F RM +++++ +L A
Sbjct: 315 VDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC 374
Query: 196 VQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
Q + L + + + +L+ + K L ++ +FD MP + VSW+
Sbjct: 375 DQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWS 434
Query: 252 TMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
M+ GY + EA + + + + D +T+++S G V E + IF M ++
Sbjct: 435 AMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKE 494
Query: 308 NTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEI----T 357
V ++ M+ + +D A + M K + W ++T I
Sbjct: 495 YNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEI 554
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A+ +FD P+ S+ + YA +D R+ ++R G L +SP S +
Sbjct: 555 SAQKVFDMNPKV-VSSYICLSNIYAAEKRWDDVERVRAMVRRKG--LKKSPGCSFIELDN 611
Query: 418 NLASLELGKQLHGQ 431
+ +G + H Q
Sbjct: 612 MVHRFLVGDKSHQQ 625
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 404 LNRSPFTSV-----LSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSV 457
L + P TS+ L + N S + G+QLH ++ E ++ L Y CG +
Sbjct: 52 LQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLM 111
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+A F+ IV K+ WN MI GYA +G +L+L+ M G + D+ T +L AC
Sbjct: 112 SQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKAC 171
Query: 518 SHTGLVEKG 526
LVE G
Sbjct: 172 GDLLLVEIG 180
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 274/740 (37%), Positives = 404/740 (54%), Gaps = 89/740 (12%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKR-DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
N ++S Y + + AR LF+ M +R DVVSWN+++S Y+ NG A +F R ++K
Sbjct: 49 NSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLF-REMQKAG 107
Query: 186 ISWNG-LLAAYVQNGR--------IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
+ N L A +Q +E + +S +V N+L+ V+ ++ A
Sbjct: 108 VGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAA 167
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVS-----G 287
IFD + +D ++WN+MI G+ QN EA + F ++A +K D + ++++ G
Sbjct: 168 RIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLG 227
Query: 288 YVQNGK------------------------------VDEARMIFDAMPEKNTVSWNAMIA 317
Y+ NGK V A ++FD M K+ +SW +IA
Sbjct: 228 YLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIA 287
Query: 318 GY---------------VQTKRMDMARELFEA--MTC---------KNVASW-------- 343
Y VQTK MD+ + + + C K V +
Sbjct: 288 AYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSD 347
Query: 344 ----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N +I YA G I +A +F+ + D +SW ++I+ Y +G + ++L +F MK
Sbjct: 348 LMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKE 407
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
+ S+LS A+L++L GK++HG + + GF N+L+ MY CGS+E
Sbjct: 408 TSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLEN 467
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
AY F K ++ W TMI Y HG GK A+ LF M+ + PD IT + +L ACSH
Sbjct: 468 AYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSH 527
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+GL+ +G +M Y + P +HY C+VDLLGRA L+EA + +K+M EP A W
Sbjct: 528 SGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWC 587
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
A LGACR++ +L E AA+ + +++P++ G YVL+SN++AASGRW DV +VR++M+ G
Sbjct: 588 AFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGG 647
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL-KQDGFVYSTKLVLHDV 698
+KK G SW+EV NKVHTF V D HPE +IY L ++ KL K+ G+V TKLVLH+V
Sbjct: 648 LKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNV 707
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
G+EEK ML HSE+LA+AYG++S G PIR+ KNLRVC DCH K +SK R +I+
Sbjct: 708 GKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIV 767
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD +RFHHF G CSCGD+W
Sbjct: 768 RDASRFHHFEDGVCSCGDFW 787
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 179/393 (45%), Gaps = 25/393 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF---- 115
D+ N + H+R G A +F+ + + ++++N+MI+G+ NG + A Q F
Sbjct: 146 DVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQ 205
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYAD 171
D + D VS +++ R L + + K ++ NT++ Y++
Sbjct: 206 DANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVA 265
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV---- 227
A +FD+M+ K+ ISW ++AAY QN EA L K + + +++M G
Sbjct: 266 YAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR-KVQTKGMDVDTMMIGSTLLAC 324
Query: 228 -KQKRLGDAKWIFD---RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
+ L AK + + + D + N +I YA + A R+FE KDV +WT+
Sbjct: 325 SGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTS 384
Query: 284 MVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
M+S YV NG +EA +F M E ++++ ++++ ++ +E+ + K
Sbjct: 385 MISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKG 444
Query: 340 V----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++ N+++ YA G + +A +F + W +I Y G + ++ LF
Sbjct: 445 FMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFS 504
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
M+ + F ++L C++ + GK+L
Sbjct: 505 IMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 7/232 (3%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ G + F VL C + + G ++HG ++K G+++ FV N+L+ MY KC
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 457 VEEAYHAFEEIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ A F+ + ++ DV+SWN++I+ Y+ +G +AL LF M+ G+ + T+V L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC + + G E ++ + V+ + +V + R G++ A + + E D
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVL-DVYVANALVAMHVRFGKMSYAARIFDELD-EKDN 178
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-YVLLSNLYAASGRWG 626
TW +++ + + L +A + ++ N V L ++ AASGR G
Sbjct: 179 ITWNSMIAG---FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLG 227
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/702 (34%), Positives = 397/702 (56%), Gaps = 57/702 (8%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
++S Y G L R+VFD M ++++ WN M+S Y + + LF++M ++ +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI--- 196
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----KAN 213
+ ++A +FD++ +++ ISWN +++ YV NG E +++ +
Sbjct: 197 --------EGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWI--------FDRMPVRDEVSWNTMITGYAQNNYLAE 265
++ + S++ G L K + F+R R S NT++ Y++ L
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER---RINFS-NTLLDMYSKCGDLDG 304
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
A R+FE+ ++V +WT+M++GY ++G+ D A + M ++ + V+ +++ +
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACAR 364
Query: 322 TKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ +D +++ + + N+ S N ++ YA+ G + A ++F M D ISW +
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTM 424
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I E+K + VL CA+L++LE GK++HG +++ G+
Sbjct: 425 IG----------------ELKP-----DSRTMACVLPACASLSALERGKEIHGYILRNGY 463
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ V NAL+ +Y KCG + A F+ I KD++SW MIAGY HG+G +A+ F
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNE 523
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ GI+PD+++ + IL ACSH+GL+E+G +FY M D+ + P +HY CMVDLL R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
L +A M+ +P PDA WGALL CR Y ELAEK AE +FE+EPEN G YVLL+N
Sbjct: 584 NLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLAN 643
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG-DTLHPEKDRIYAYLE 676
+YA + +W +V ++R K+ +G++K G SW+E++ KV+ F G ++ HP I + L+
Sbjct: 644 IYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLK 703
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
++ K+K++G TK L + E +KE L HSEKLA+A+G+L++P + IRV KNLR
Sbjct: 704 KMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC DCH K +SK R I+LRD+NRFHHF G CSC +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 40/360 (11%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGY 133
+SA +F+ + R +S+N+MISGY+ NG + ++ QM DL + ++ G
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 134 VRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ +LS + + + K R + NT+L Y++ G D A R+F++M E+N +SW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 190 GLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A Y ++GR + A L + +VV+ S++ + L + K + D +
Sbjct: 322 SMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 246 DEVS----WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS--------------- 286
+ S N ++ YA+ + A +F VKD+ +W M+
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPA 441
Query: 287 ----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
++ GK ++ + V+ NA++ YV+ + +AR LF+ + K++ S
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVA-NALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
W MI GY G A F+ M + D +S+ +I+ + SG E R F MK
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 166/401 (41%), Gaps = 81/401 (20%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM------------------------------ 87
D D+ WN I+ ++ NG + L ++ M
Sbjct: 213 DRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKA 272
Query: 88 ----------PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
RR + S N ++ Y G LD A +VF++M +R++VSW MI+GY R+
Sbjct: 273 VHSLAIKSSFERRINFS-NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG 331
Query: 138 SLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWN 189
A L + M K DVV+ ++L A++G D + + D + +E N N
Sbjct: 332 RSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCN 391
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR--------------LGDA 235
L+ Y + G +E A +F + +++SWN+++G R L
Sbjct: 392 ALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERG 451
Query: 236 K----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
K +I D N ++ Y + L A+ LF+ P KD+ +WT M++GY +
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511
Query: 292 GKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-------V 340
G +EA F DA E + VS+ +++ + ++ F M KN +
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM--KNDFNIEPKL 569
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ M+ +++G ++ A + +P D W A++ G
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 133/317 (41%), Gaps = 44/317 (13%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPAR 112
G+ ++ W I + R+G D A+ + M + V+ +++ +G LD +
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372
Query: 113 QVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM-------- 160
V D + + +L N ++ Y + S+ AA ++F M +D++SWNTM
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDS 432
Query: 161 ------LSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFES 210
L A + + I +L S N L+ YV+ G + A +LF+
Sbjct: 433 RTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNNYLA 264
+ ++VSW ++ G+ +A F+ M P DEVS+ +++ + + L
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP--DEVSFISILYACSHSGLLE 550
Query: 265 EAQRLFEEAPVKDVFT-------WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMI 316
+ R F +K+ F + MV + G + +A + +P + W A++
Sbjct: 551 QGWRFF--YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALL 608
Query: 317 AGYVQTKRMDMARELFE 333
G +++A ++ E
Sbjct: 609 CGCRNYHDIELAEKVAE 625
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 67/244 (27%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG----------------------- 132
NA++ Y G ++ A VF M +D++SWN MI
Sbjct: 391 NALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALER 450
Query: 133 --------------------------YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
YV+ L AR LF+M+P +D+VSW M++GY
Sbjct: 451 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM 510
Query: 167 NGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN-----WEVV 217
+GY + A F+ M +E +E+S+ +L A +G +E+ F N ++
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLE 570
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNY----LAE--AQRLF 270
+ ++ + L A + +P+ D W ++ G NY LAE A+R+F
Sbjct: 571 HYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGC--RNYHDIELAEKVAERVF 628
Query: 271 EEAP 274
E P
Sbjct: 629 ELEP 632
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 125/316 (39%), Gaps = 59/316 (18%)
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
R H + A I + Q G E+++ L ++ L + SVL CA L S
Sbjct: 60 RTIDHQVTDYNAKILHFCQLGDLENAMELICMCQK--SELETKTYGSVLQLCAGLKSFTD 117
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GK++H + +G L+ Y CG ++E F+ + K+V WN M++ YA+
Sbjct: 118 GKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177
Query: 485 HGFGKDALMLF------------------------------------------------- 495
G K+++ LF
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237
Query: 496 --ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
+ M +GI D T++ +L C+++G + G + +S+ ++D+
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
+ G LD A + + M E + +W +++ Y + ++ A +++ +ME E + V
Sbjct: 297 SKCGDLDGALRVFEKMG-ERNVVSWTSMIAG---YTRDGRSDGAIKLLQQMEKEGVKLDV 352
Query: 614 L-LSNLYAASGRWGDV 628
+ ++++ A R G +
Sbjct: 353 VAITSILHACARSGSL 368
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/491 (44%), Positives = 313/491 (63%)
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
Y + G+VD AR FD P ++ N M+A YV + AR++F+ M +++ SWNTMI
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
GYA GE+ AR +FD D SW+++I+ YA+S S+++L L+ EM +
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
SV+S C++L +L +G ++H + E +G AL+ MY KCG +E A F+ +
Sbjct: 122 TLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM 181
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+KDV +W++MI G A HG G ++L LF M + G+KP+ +T VG+L AC+H GLV +G
Sbjct: 182 PEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK 241
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+YF SMN +G+ P +HY CMVDLLGR+G ++EA+ L+++M FEPD W ALLGACR+
Sbjct: 242 KYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRI 301
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+ E+AE+A + ++P G YVLLSN+YA + W V+++R +R ++++ G S
Sbjct: 302 HKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRS 361
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
+E K+H F GD LHP IY LEE+ +LKQ G+ T LVL D+ E+ KE L
Sbjct: 362 SIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSL 421
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
HSEKLA+A+ +L+ PA IR+ KNLR CEDCH+A+K IS + R +I+RD NRFHHF
Sbjct: 422 AEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHF 481
Query: 768 SGGSCSCGDYW 778
S G CSC DYW
Sbjct: 482 SEGQCSCKDYW 492
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+ K R+ A+ FD P+RD N M+ Y + +AEA+++F+ P++D+ +W M+
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------- 335
GY G+V AR IFD +++ SW++MI+ Y +++R A EL+ M
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 336 -------TCKNVASW----------------------NTMITGYAQSGEITHARNLFDRM 366
C ++ + +I YA+ G+I A+ +FDRM
Sbjct: 122 TLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM 181
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
P+ D +W+++I G A G +SL LF +M G + N F VL C ++ + GK
Sbjct: 182 PEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK 241
Query: 427 QLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV-DKDVISWNTMIAGYAR 484
+ + +V G E ++ + + G VEEA + + D I W ++
Sbjct: 242 KYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRI 301
Query: 485 H 485
H
Sbjct: 302 H 302
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 17/283 (6%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
+ + G D A F+ P R N M++ Y+ ++ AR+VFD MP RDLVSWN MI
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 131 SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEI 186
GY + AR +F+ RD SW++M+S YA++ + A ++ M + + I
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 187 SWNGLLAAYVQNGRI---EEACMLFES-KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+ +++A G + E ES + ++ +L+ + K + A+ +FDRM
Sbjct: 122 TLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM 181
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
P +D +W++MI G A + E+ LF E + T+ ++ G V E +
Sbjct: 182 PEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK 241
Query: 299 MIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMT 336
F +M E + + + M+ ++ ++ AR+L +MT
Sbjct: 242 KYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMT 284
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 171/412 (41%), Gaps = 35/412 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ NV + ++ A VF+ MP R VS+N MI GY + G++ AR++FD
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARR 175
RD SW+ MIS Y +++ A L+ M D ++ +++S + G
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141
Query: 176 IFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
+ R +E N I + L+ Y + G IE A +F+ +V +W+S++ G
Sbjct: 142 VH-RFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHG 200
Query: 231 RLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFE-----EAPVKDVFTW 281
++ +F +M + V++ ++ ++E ++ F V +
Sbjct: 201 LGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHY 260
Query: 282 TAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
MV ++G V+EAR + +M E +T+ W A++ K +++A E + +
Sbjct: 261 GCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDP 320
Query: 341 ---ASWNTMITGYAQSG--------EITHARNLFDRMPQHDCISWA----AIIAGYAQSG 385
+ + YAQ+ T R+ R+P I W ++G
Sbjct: 321 LGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHP 380
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
S++ R+ EM ++ P T ++ + S E H + + + F
Sbjct: 381 RSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAF 432
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/583 (40%), Positives = 344/583 (59%), Gaps = 11/583 (1%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQNN 261
LF N +V N+L+ G + ++ F M R D S+ ++ A
Sbjct: 61 LFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYR 120
Query: 262 YLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
L +L +A V +F T +VS Y + G V A+ +F+ M E N V+WNA++
Sbjct: 121 SLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVT 180
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ + A +F M +N+ SWN M+ GY ++GE+ AR LF MP D +SW+ +
Sbjct: 181 ACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTM 240
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I G+A +G+ ++ F E+++ G R N T LS CA+ ++E GK LHG + K GF
Sbjct: 241 IVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGF 300
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNTMIAGYARHGFGKDALMLFE 496
V NALL Y KCG+V A FE + +K ++SW +MIAG A HG+G++A+ LF
Sbjct: 301 LWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFH 360
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M+ GI+PD I + IL ACSH GL+EKG EYFY M Y + P +HY CMVDL GRA
Sbjct: 361 EMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRA 420
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G+LD+A + +MP P A W LLGAC ++G +LAE+ E + E++P N+G +VLLS
Sbjct: 421 GQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLS 480
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+YA +G+W DV+ VR M D+ + K G+S +EV +++F G+ + + Y L+
Sbjct: 481 NIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLK 540
Query: 677 ELEFKLKQDG-FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
E+ KL+ +G ++ VLHD+ +EEKE + HSEKLAVA+GI + G IR++KNL
Sbjct: 541 EIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNL 600
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RVC DCH +K ISK+ G I++RD +RFH F GSCSC DYW
Sbjct: 601 RVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 155/310 (50%), Gaps = 19/310 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A VF M + V++NA+++ G + A +F++MP R+L SWNVM++GY + L
Sbjct: 160 AKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGEL 219
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY 195
AR LF MP +D VSW+TM+ G+A NG+ A F + + NE+S G L+A
Sbjct: 220 ELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSAC 279
Query: 196 VQNGRIEEACML--FESKAN--WEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSW 250
G IE +L F K+ W V N+L+ + K +G A+ +F+RMP R VSW
Sbjct: 280 ADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSW 339
Query: 251 NTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
+MI G A + Y EA +LF EE+ ++ D + +++ G +++ F M +
Sbjct: 340 TSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKD 399
Query: 307 KNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVA-SWNTMITGYAQSGEITHAR 360
+ + M+ Y + ++D A E M A W T++ + G + A
Sbjct: 400 IYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAE 459
Query: 361 NLFDRMPQHD 370
+ +R+ + D
Sbjct: 460 RVKERLSELD 469
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 189/430 (43%), Gaps = 53/430 (12%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-----DLVSWNVMISG 132
D A +F P +N +I G + + F +M +R D S+ ++
Sbjct: 56 DYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKA 115
Query: 133 YVRNKSLSAARNLF--EMMPKRD--VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+SL + L ++ D + T++S Y++ G+ A+++F+ M E N ++W
Sbjct: 116 AASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAW 175
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N ++ A + G ++ A M+F + SWN ++ G+ K L A+ +F MPV+D+V
Sbjct: 176 NAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDV 235
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
SW+TMI G+A N + EA F E + + T +S G ++ + I
Sbjct: 236 SWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGK-ILHGF 294
Query: 305 PEKNTVSW-----NAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITH 358
EK+ W NA++ Y + + MAR +FE M K ++ SW +MI G
Sbjct: 295 IEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAG--------- 345
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A GY E++++LF EM+ G R + F S+L C++
Sbjct: 346 ----------------------LAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSH 383
Query: 419 LASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWN 476
+E G + ++ + E ++ +Y + G +++AY + V I W
Sbjct: 384 AGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWR 443
Query: 477 TMIAGYARHG 486
T++ + HG
Sbjct: 444 TLLGACSIHG 453
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 23/268 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WNV + + + G + A +F MP + VS++ MI G+ NG A F ++
Sbjct: 202 NLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQ 261
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP---KRDVVSW-----NTMLSGYAQNGYAD 171
Q + V ++G + + + A +++ ++ W N +L Y++ G
Sbjct: 262 QVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVG 321
Query: 172 AARRIFDRMLEKNEI-SWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLM--- 223
AR +F+RM EK I SW ++A +G EEA LF ES + +++ S++
Sbjct: 322 MARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYAC 381
Query: 224 --GGFVKQ--KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-KDV 278
G +++ + K I++ P + + M+ Y + L +A PV
Sbjct: 382 SHAGLIEKGYEYFYKMKDIYNIEPAIEH--YGCMVDLYGRAGQLDKAYEFIIHMPVLPTA 439
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPE 306
W ++ +G V A + + + E
Sbjct: 440 IIWRTLLGACSIHGNVKLAERVKERLSE 467
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC--GSVEEAYHAFEEI 467
+S+L+ C +L +L KQ+H + K G + + LL+ +++ A F
Sbjct: 9 SSLLTNCRSLKNL---KQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHF 65
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP-DDITMVGILSACSHTGLVEKG 526
+ DV NT+I G A +++L+ F M+ P D + +L A + +E G
Sbjct: 66 PNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESG 125
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ + +G+ + T +V + G + A+ + + M FEP+ W A++ AC
Sbjct: 126 IQ-LHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEM-FEPNVVAWNAVVTACF 183
Query: 587 LYGKTELAEKAAEVIFEMEP 606
G K A+++F P
Sbjct: 184 RCGDV----KGADMMFNRMP 199
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 267/785 (34%), Positives = 396/785 (50%), Gaps = 92/785 (11%)
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------DLVSWNVMISGYVRNKSL 139
++P+ S + + + G R V ++ QR D NV+++ Y + L
Sbjct: 39 ALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPL 98
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAY 195
+ AR LF+ MP+R+ VS+ T++ GYA G + A +F R+ E N +L
Sbjct: 99 ATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVL 158
Query: 196 VQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
V AC + +L+ + + A+ +FD + +D V+W
Sbjct: 159 VTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWT 218
Query: 252 TMITGYAQNNYLAEAQRLFEE----------------------------------APVKD 277
M++ Y++N+ A F + VK
Sbjct: 219 AMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKT 278
Query: 278 VFTWTAMVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
++ V G Y + G +++A IF+ +P + + W+ +I+ Y Q+ + + A E+F
Sbjct: 279 LYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMF 338
Query: 333 EAM-----------------TCKNVASW----------------------NTMITGYAQS 353
M C N+A N ++ YA+
Sbjct: 339 LRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKC 398
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
+ ++ +F + + +SW II GY QSG++ED+L +F EM+ + F+SVL
Sbjct: 399 RNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVL 458
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
CAN +S++ Q+H + K F V N+L+ Y KCG + +A FE IV+ DV+
Sbjct: 459 RACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVV 518
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWN++I+ YA HG +AL LF+ M IK +D+T V +LS C TGLV +G F SM
Sbjct: 519 SWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSM 578
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
D+ + P+ +HYTC+V LLGRAGRL +A + ++P P W ALL +C ++ L
Sbjct: 579 MMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVAL 638
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
AAE + ++EP + YVLLSN+YAA+G +V+ R MR+ GVKK G SW+E++
Sbjct: 639 GRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKG 698
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+VH FSVG HP+ I A LE L K ++G+V +VLHDV EEEK ML HSE+
Sbjct: 699 EVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSER 758
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+AYG+ P G PIR+MKNLR C DCH K ISKIV R II+RD NRFHHF G CS
Sbjct: 759 LALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICS 818
Query: 774 CGDYW 778
CGDYW
Sbjct: 819 CGDYW 823
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 118/259 (45%), Gaps = 23/259 (8%)
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WN I + ++G + AL VF+ M + V++++++ + A Q+ +
Sbjct: 418 SWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLI 477
Query: 119 PQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+ D + N +I Y + + A +FE + + DVVSWN+++S YA +G A A
Sbjct: 478 EKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNAL 537
Query: 175 RIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES-----KANWEVVSWNSLMGG 225
+FDRM ++ N++++ LL+ G + + LF S + + + ++
Sbjct: 538 ELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRL 597
Query: 226 FVKQKRLGDA-KWIFDRMPVRDEVSWNTMITGYAQNNYLA----EAQRLFEEAPVKDVFT 280
+ RL DA K+I D + W +++ + +A A+++ + P D T
Sbjct: 598 LGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEP-HDETT 656
Query: 281 WTAMVSGYVQNGKVDEARM 299
+ + + Y G +DE +
Sbjct: 657 YVLLSNMYAAAGILDEVAL 675
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/645 (38%), Positives = 351/645 (54%), Gaps = 82/645 (12%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR------ 268
E ++ +L + K +R DA+ +FDRMP RD V+WN ++ GYA+N + A
Sbjct: 50 ESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQ 109
Query: 269 ------------LFEEAPV----------KDVFTW-------------TAMVSGYVQNGK 293
L P ++V + TA++ Y + G
Sbjct: 110 GEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGA 169
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----------------- 336
V+ AR +FD MP +N+VSWNAMI GY A LF M
Sbjct: 170 VEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQA 229
Query: 337 ----------------------CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC-IS 373
NV+ N +IT YA+ A +F+ + IS
Sbjct: 230 CGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRIS 289
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I G+ Q+ ED+ RLF M+ R + SV+ A+++ + +HG +
Sbjct: 290 WNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSI 349
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+ + +V AL+ MY KCG V A F+ D+ VI+WN MI GY HGFG+ A+
Sbjct: 350 RHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVE 409
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LFE MK G P++ T + +L+ACSH GLV++G +YF SM +DYG+ P +HY MVDLL
Sbjct: 410 LFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLL 469
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GRAG+LDEA + +KNMP EP + +GA+LGAC+L+ ELAE++A++IFE+ PE +V
Sbjct: 470 GRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHV 529
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LL+N+YA + W DV++VR M +G++K G+S ++++N+VHTF G T H IYA
Sbjct: 530 LLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYA 589
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L +L ++K G+V T + HDV ++ K +L HSEKLA+AYG++ G I++ K
Sbjct: 590 RLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKK 648
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLRVC DCHNA K IS + GR II+RD RFHHF G CSCGDYW
Sbjct: 649 NLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 189/443 (42%), Gaps = 94/443 (21%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD---------LVSW---- 126
A VF+ MP R V++NA+++GY NG A + +M + LVS
Sbjct: 70 ARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC 129
Query: 127 ----------------------------NVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
++ Y + ++ AAR +F+ MP R+ VSWN
Sbjct: 130 ADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWN 189
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKN-EISWNGLLAAYVQNG---------RIEEACMLF 208
M+ GYA NG A A +F RM+++ +++ +LAA G R+ E +
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV 249
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMITGYAQNNYLAEAQ 267
+N V N+L+ + K KR A +F+ + + +SWN MI G+ QN +A+
Sbjct: 250 GLSSNVSVT--NALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAE 307
Query: 268 RLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGY 319
RLF +++V FT +++ +AR I +++ A+I Y
Sbjct: 308 RLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMY 367
Query: 320 VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ R+ +AR LF++ ++V +WN MI G
Sbjct: 368 SKCGRVSIARRLFDSARDRHVITWNAMIHG------------------------------ 397
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFE 438
Y G+ + ++ LF EMK G N + F SVL+ C++ ++ G++ + K G E
Sbjct: 398 -YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLE 456
Query: 439 AGCFVGNALLVMYCKCGSVEEAY 461
G ++ + + G ++EA+
Sbjct: 457 PGMEHYGTMVDLLGRAGKLDEAW 479
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
FT++L CA A L G+ +H QL G + AL MY KC +A F+ +
Sbjct: 19 FTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMP 78
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMK--TVGIKPDDITMVGILSACSHTGLVEKG 526
+D ++WN ++AGYAR+G A+ M+ G +PD +T+V +L AC+ +
Sbjct: 79 SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHAC 138
Query: 527 TE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
E + +++ + N T ++D + G ++ A+ + MP ++ +W A++
Sbjct: 139 REVHAFALRAGLDELVNVS--TAVLDAYCKCGAVEAARAVFDCMPVR-NSVSWNAMIDG- 194
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA---ASGRWGDVSKVR 632
Y A +A + + M E G+ V +++ A A G G + +VR
Sbjct: 195 --YADNGNATEAMALFWRMVQE--GVDVTDASVLAALQACGELGYLDEVR 240
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 271/778 (34%), Positives = 411/778 (52%), Gaps = 97/778 (12%)
Query: 91 SSVSY-NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
SSV+ N +++ Y G + +VFD++ RD VSWN I+ R + A F M
Sbjct: 126 SSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAM 185
Query: 150 PKRDV-VSWNTMLS----------------GYAQNGYADAARRIFDRMLEKNEISWNGLL 192
++ +S T++S G +GY+ R+ D+ N N L+
Sbjct: 186 QMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYS---LRVGDQKTFTN----NALM 238
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEV 248
A Y + GR++++ LFES + ++VSWN+++ F + R +A F M + D V
Sbjct: 239 AMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGV 298
Query: 249 SWNTMITGYAQNNYL-----AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+ +++ + L A L +++ F +A+V Y +V+ R +FD
Sbjct: 299 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDH 358
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------------TCKNVASW-- 343
+ + WNAMI+GY + + A LF M C + ++
Sbjct: 359 ILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSN 418
Query: 344 --------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
N ++ Y++ G++ + +FD M D +SW +I GY
Sbjct: 419 KESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVL 478
Query: 384 SGYSEDSLRLFIEMKRYGE-----------------RLNRSPFTSVLSTCANLASLELGK 426
SG ++L L EM+R + N +VL CA LA++ GK
Sbjct: 479 SGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGK 538
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
++H ++ + VG+AL+ MY KCG + + F E+ +K+VI+WN +I HG
Sbjct: 539 EIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHG 598
Query: 487 FGKDALMLFESMKTVG-----IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
G++AL LF++M KP+++T + + +ACSH+GL+ +G FY M D+GV P
Sbjct: 599 KGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEP 658
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD-AATWGALLGACRLYGKTELAEKAAEV 600
S HY C+VDLLGRAG+L+EA L+ MP E D W +LLGACR++ EL E AA+
Sbjct: 659 TSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKN 718
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+ +EP A YVLLSN+Y+++G W +VR MR GVKK G SW+E +++VH F
Sbjct: 719 LLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMA 778
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HP+ ++++ +LE L K++++G+V T VLH+V E+EKE++L HSEKLA+A+GI
Sbjct: 779 GDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGI 838
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
L+ P G IRV KNLRVC DCH A K ISKI+ R II+RD RFHHF G+CSCGDYW
Sbjct: 839 LNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 5/221 (2%)
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
P SW + +S +++ +IEM G R + F +VL + L L+ G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 427 QLHGQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
Q+H VK G+ + V N L+ MY KCG + + F+ I D+D +SWN+ IA R
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
+ AL F +M+ ++ T+V + ACS+ G++ G ++ + + K
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMH-GLRLGKQLHGYSLRVGDQKT 231
Query: 546 YT--CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+T ++ + + GR+D+++ L ++ + D +W ++ +
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESF-VDRDMVSWNTMISS 271
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 133/363 (36%), Gaps = 129/363 (35%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSM-------PRRSSVS------------------- 94
I WN I+ + RNG + AL +F M P ++++
Sbjct: 364 IELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIH 423
Query: 95 --------------YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
NA++ Y G++D + +FD M RD VSWN MI+GYV + S
Sbjct: 424 GYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYS 483
Query: 141 AARNLFEMMP---------------------KRDVVSWNTMLSG---------------- 163
A L M K + ++ T+L G
Sbjct: 484 NALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAY 543
Query: 164 -------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
YA+ G + +RR+F+ M KN I+WN L+ A +G+ EEA
Sbjct: 544 AIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEA 603
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
LF++ + R G+AK +EV++ T+ + + ++
Sbjct: 604 LELFKNMV--------------AEAGRGGEAK--------PNEVTFITVFAACSHSGLIS 641
Query: 265 EAQRLFEE-------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--NTVSWNAM 315
E LF P D + + G + G+++EA + + MP + +W+++
Sbjct: 642 EGLNLFYRMKHDHGVEPTSDHYACVVDLLG--RAGQLEEAYELVNTMPAEFDKVGAWSSL 699
Query: 316 IAG 318
+
Sbjct: 700 LGA 702
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/610 (40%), Positives = 352/610 (57%), Gaps = 51/610 (8%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMP--VRDEVSWNTMITGYAQNNYLAEAQRLFEE----- 272
+SL+ +++ G+A+ +FD MP R V W+ ++ +A A RL EE
Sbjct: 56 SSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDG 115
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVSW------------- 312
+V TW +VSG ++G+ +A + M P+ VS
Sbjct: 116 GVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSV 175
Query: 313 NAMIAGY-----------VQTKRMDM---------ARELFEAMTCKNVASWNTMITGYAQ 352
+ GY V T +DM +F+ + +VAS N +I G ++
Sbjct: 176 GQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSR 235
Query: 353 SGEITHARNLF----DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ ++ A LF DR + + +SW +I+A Q+G +++ F EM+ G N
Sbjct: 236 NAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVT 295
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
VL AN+A+L G+ H ++ GF +V +AL+ MY KCG V++A F+ +V
Sbjct: 296 IPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMV 355
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++V+SWN MI GYA +G +A+ +F SM KPD +T +L+AC+ GL E+G
Sbjct: 356 SRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRH 415
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF M+ +YGV P +HY CMV LLGRAG+LDEA +L+ +MPFEPDA WG+LLG+CR++
Sbjct: 416 YFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVH 475
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
G +LAE AAE +F +EPENAG YVLLSN+YA+ W V++VR M+D G+KK G SW
Sbjct: 476 GNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSW 535
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
+E++NKVH GD HP I + +L ++++ GFV ST VLHDV E+EK+ +L
Sbjct: 536 IEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILA 595
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
HSEKLAVA G++S G +RV+KNLR+C DCH A+K IS GR I +RD NRFHHFS
Sbjct: 596 VHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFS 655
Query: 769 GGSCSCGDYW 778
GG CSCGD+W
Sbjct: 656 GGKCSCGDFW 665
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 188/432 (43%), Gaps = 71/432 (16%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARRIFD 178
RD + ++ Y+R + AR LF+ MP+ R VV W+ +++ +A G A+ A R+ +
Sbjct: 50 RDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLE 109
Query: 179 RM-----LEKNEISWNGLLAAYVQNGRIEEACMLFES----------------------- 210
M +E N I+WNGL++ ++GR +A + +
Sbjct: 110 EMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGD 169
Query: 211 -------------------KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
+A+ VV+ +L+ + K + + +FD D S N
Sbjct: 170 VGLVSVGQQLHGYAVKAGCRADACVVT--ALIDMYGKCGQAAEVVRVFDESSHMDVASCN 227
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAM--- 304
+I G ++N + EA RLF+E + +V +WT++V+ VQNGK EA F M
Sbjct: 228 ALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQ 287
Query: 305 -PEKNTVSWNAMIAGYVQTKRMDMARE----LFEAMTCKNVASWNTMITGYAQSGEITHA 359
E N+V+ ++ + + R +V + ++ YA+ G + A
Sbjct: 288 GTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDA 347
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R +FD M + +SW A+I GYA G + +++ +F M + ++ + FT +L+ C
Sbjct: 348 RIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQA 407
Query: 420 ASLELG----KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVIS 474
E G K++H + G ++ + + G ++EAY ++ + D
Sbjct: 408 GLTEEGRHYFKEMHNEY---GVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYI 464
Query: 475 WNTMIAGYARHG 486
W +++ HG
Sbjct: 465 WGSLLGSCRVHG 476
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 171/399 (42%), Gaps = 70/399 (17%)
Query: 68 ITTHMRNGCCDSALHVFNSMPR--RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD--- 122
+ ++R G +A +F+ MPR R+ V ++A+++ + G + A ++ ++M +RD
Sbjct: 59 LHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEM-RRDGGV 117
Query: 123 ---LVSWNVMISGY-----VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+++WN ++SG R+ ++ A E + + D + LS G +
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQ 177
Query: 175 RIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
++ ++ + L+ Y + G+ E +F+ ++ +V S N+L+ G +
Sbjct: 178 QLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNA 237
Query: 231 RLGDAKWIF----DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---------- 276
++ +A +F DR + VSW +++ QN EA F E +
Sbjct: 238 QVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIP 297
Query: 277 -----------------------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
DV+ +A+V Y + G+V +AR+IFD M +
Sbjct: 298 CVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSR 357
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAM-TCK---NVASWNTMITGYAQSGEITHARNLF 363
N VSWNAMI GY A +F +M CK ++ ++ ++ Q+G R+ F
Sbjct: 358 NVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYF 417
Query: 364 DRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEM 397
M +S +A ++ ++G +++ L +M
Sbjct: 418 KEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDM 456
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 132/310 (42%), Gaps = 49/310 (15%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
R + A+I Y GQ +VFD+ D+ S N +I+G RN + A LF+
Sbjct: 189 RADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKE 248
Query: 149 MPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY----- 195
R +VVSW ++++ QNG A F M E N ++ +L A+
Sbjct: 249 FVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAA 308
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ +GR C +V ++L+ + K R+ DA+ IFD M R+ VSWN MI
Sbjct: 309 LMHGR-SAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIG 367
Query: 256 GYAQNNYLAEAQRLF------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
GYA A +F ++ P D+ T+T +++ Q G +E R F M +
Sbjct: 368 GYAMYGEAVNAVWMFHSMLKCKQKP--DMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYG 425
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-Q 368
VS RM+ + M+T ++G++ A +L MP +
Sbjct: 426 VS-----------PRME---------------HYACMVTLLGRAGKLDEAYDLISDMPFE 459
Query: 369 HDCISWAAII 378
D W +++
Sbjct: 460 PDAYIWGSLL 469
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ + + + + G A +F++M R+ VS+NAMI GY + G+ A +F M
Sbjct: 327 DVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSML 386
Query: 119 ---PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS-----WNTMLSGYAQNGYA 170
+ D+V++ +++ + R+ F+ M VS + M++ + G
Sbjct: 387 KCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKL 446
Query: 171 DAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEA 204
D A + M E + W LL + +G ++ A
Sbjct: 447 DEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 269/798 (33%), Positives = 414/798 (51%), Gaps = 125/798 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+ I + +NG A VF + R +VS+ AM+SGY NG + A ++ QM + +V
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 125 SW---------------------------------------NVMISGYVRNKSLSAARNL 145
N +I+ Y+R S A +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F MP RD V++NT++SG+AQ G+ + A IF+ M L + ++ + LLAA G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 202 EEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
++ L F++ + + + SL+ +VK + A IF+ + V WN M+ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 258 AQNNYLAEAQRLF----------------------------------EEAPVKDVFTWTA 283
Q N LA++ LF VK F
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 284 MVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-- 336
VSG Y + G +++AR + + + EK+ VSW +MIAGYVQ + A F+ M
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 337 ---------------CK----------------------NVASWNTMITGYAQSGEITHA 359
C +V+ WN ++ YA+ G I A
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+ F+ + D I+W +++G+AQSG E++L++F+ M + G + N F S LS ANL
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A ++ GKQ+H +++K G VGNAL+ +Y KCGS E+A F E+ +++ +SWNT+I
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
++HG G +AL LF+ MK GIKP+D+T +G+L+ACSH GLVE+G YF SM+ +YG+
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P HY C++D+ GRAG+LD A+ ++ MP DA W LL AC+++ E+ E AA+
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAK 740
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP ++ YVLLSN YA + +W + +VR MRDRGV+K G SW+EV+N VH F
Sbjct: 741 HLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFF 800
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP ++IY +L + ++ + G+ + HD +E ++ HSEKLAV +G
Sbjct: 801 VGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFG 860
Query: 720 ILSIPAGRPIRVMKNLRV 737
++S+P P+RV+KNLRV
Sbjct: 861 LMSLPPCMPLRVIKNLRV 878
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 230/493 (46%), Gaps = 54/493 (10%)
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
R L K I N L+ Y +NG + A +FE + + VSW +++ G+ + +A +
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 239 FDRM----PVRDEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQ 290
+ +M V +++++ + A+ + + ++ ++F A+++ Y++
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------CKNVASW 343
G A +F MP ++TV++N +I+G+ Q + A E+FE M C ++S
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 344 --------------------------------NTMITGYAQSGEITHARNLFDRMPQHDC 371
+++ Y + G++ A +F+ + +
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ W ++ + Q S LF +M+ G R N+ + +L TC ++LG+Q+H
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
VK GFE+ +V L+ MY K G +E+A E + +KDV+SW +MIAGY +H KDA
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L F+ M+ GI PD+I + +S C+ + +G + ++ G + + +V+
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVN 489
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA-- 609
L R GR+ EA + + + + D TW L+ + ++ L E+A +V M+
Sbjct: 490 LYARCGRIREAFSSFEEIEHK-DEITWNGLVSG---FAQSGLHEEALKVFMRMDQSGVKH 545
Query: 610 GMYVLLSNLYAAS 622
++ +S L A++
Sbjct: 546 NVFTFVSALSASA 558
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 168/366 (45%), Gaps = 33/366 (9%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMISGYL 103
K+R + + D+ W I ++++ CC AL F M + ++ + ISG
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457
Query: 104 ----LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+ L +++ D+ WN +++ Y R + A + FE + +D ++WN
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
Query: 160 MLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESK 211
++SG+AQ+G + A ++F RM ++ N ++ L+A I++ + ++
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
++E N+L+ + K DAK F M R+EVSWNT+IT +Q+ EA LF+
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFD 637
Query: 272 EAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQT 322
+ + + T+ +++ G V+E F +M ++ + + +I + +
Sbjct: 638 QMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRA 697
Query: 323 KRMDMARELFEAM-TCKNVASWNTMITGYA-----QSGEITHARNLFDRMPQHDCISWAA 376
++D A++ E M + W T+++ + GE A++L + P HD S+
Sbjct: 698 GQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFA-AKHLLELEP-HDSASYVL 755
Query: 377 IIAGYA 382
+ YA
Sbjct: 756 LSNAYA 761
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 7/267 (2%)
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-ANLASLEL 424
M + S +AG+ L LF + R L F L C N ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
++H + V G VGN L+ +Y K G V A FEE+ +D +SW M++GYA+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
+G G++AL L+ M G+ P + +LS+C+ L +G ++ +G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
++ L R G A+ + +MP D T+ L+ + + E A E+ EM
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG---HAQCGHGEHALEIFEEM 235
Query: 605 EPEN-AGMYVLLSNLYAASGRWGDVSK 630
+ + V +S+L AA GD+ K
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQK 262
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/596 (39%), Positives = 349/596 (58%), Gaps = 50/596 (8%)
Query: 232 LGD---AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------------AP 274
LGD ++ FD++P +D +WN+MI+ Y N + EA F + P
Sbjct: 64 LGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPP 123
Query: 275 VK-----------------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
V +VF +++ Y + G AR +FD MP ++ S
Sbjct: 124 VLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 183
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKN--------VASWNTMITGYAQSGEITHARNLF 363
WNAMI+G +Q A ++ + M + V+ + YA+ G + A +F
Sbjct: 184 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVF 243
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSPFTSVLSTCANLASL 422
+ +P D ISW +I GYAQ+G + +++ ++ M+ E + N+ + S+L A++ +L
Sbjct: 244 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 303
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+ G ++HG+++K FV L+ +Y KCG + +A F ++ + ++WN +I+ +
Sbjct: 304 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 363
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
HG + L LF M G+KPD +T V +LSACSH+G VE+G ++ + + ++YG+ P+
Sbjct: 364 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG-KWCFRLMQEYGIKPS 422
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
KHY CMVDLLGRAG L+ A + +K+MP +PDA+ WGALLGACR++G EL + A++ +F
Sbjct: 423 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 482
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E++ +N G YVLLSN+YA G+W V KVR R+RG+KK G+S +EV KV F G+
Sbjct: 483 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 542
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP+ IY L L K+K G++ VL DV E+EKEH+L HSE+LA+A+GI+S
Sbjct: 543 QSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 602
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P PIR+ KNLRVC DCHNA K IS+I R I++RD+NRFHHF G CSCGDYW
Sbjct: 603 TPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 201/456 (44%), Gaps = 89/456 (19%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-------EMMPK------- 151
G + +R FDQ+PQ+D+ +WN MIS YV N A F E+ P
Sbjct: 65 GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV 124
Query: 152 ----------RDV--------VSWNTMLSG-----YAQNGYADAARRIFDRMLEKNEISW 188
R + WN ++ Y++ G+ AR +FD M ++ SW
Sbjct: 125 LKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSW 184
Query: 189 NGLLAAYVQNGRIEEACMLFES------KANWEVVSWNSLMGGFV----KQKRLGDAKWI 238
N +++ +QNG +A + + K N+ V S++ FV K L A +
Sbjct: 185 NAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVV--SILPVFVDMYAKLGLLDSAHKV 242
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEA---QRLFEEAP--VKDVFTWTAMVSGYVQNGK 293
F+ +PV+D +SWNT+ITGYAQN +EA ++ EE + + TW +++ Y G
Sbjct: 243 FEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 302
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
+ + I + + N + ++F A TC +I Y +
Sbjct: 303 LQQGMKIHGRVIKTN------------------LHLDVFVA-TC--------LIDVYGKC 335
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + A +LF ++PQ ++W AII+ + G++E +L+LF EM G + + F S+L
Sbjct: 336 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 395
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDV 472
S C++ +E GK + + G + ++ + + G +E AY +++ + D
Sbjct: 396 SACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDA 455
Query: 473 ISWNTMIAGYARHG------FGKDALMLFESMKTVG 502
W ++ HG F D L +S K VG
Sbjct: 456 SIWGALLGACRIHGNIELGKFASDRLFEVDS-KNVG 490
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 193/449 (42%), Gaps = 99/449 (22%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEA-PVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+E+ +N + + + L A V+ +F T +V+ Y G V +R FD +
Sbjct: 18 EEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQI 77
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------------TCKNVA----- 341
P+K+ +WN+MI+ YV A F + C +
Sbjct: 78 PQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKI 137
Query: 342 ---------SWNTMITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
WN + Y++ G AR+LFD MP D SW A+I+G Q+G +
Sbjct: 138 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 197
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+L + EM+ G ++N S+L +
Sbjct: 198 AQALDVLDEMRLEGIKMNFVTVVSILPVFVD----------------------------- 228
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPD 506
MY K G ++ A+ FE I KDVISWNT+I GYA++G +A+ +++ M+ I P+
Sbjct: 229 --MYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 286
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY-----TCMVDLLGRAGRLDE 561
T V IL A +H G +++G M VI + H TC++D+ G+ GRL +
Sbjct: 287 QGTWVSILPAYAHVGALQQG------MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVD 340
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
A +L +P E + TW A++ ++G AEK ++ EM +P++ LLS
Sbjct: 341 AMSLFYQVPQE-SSVTWNAIISCHGIHGH---AEKTLKLFGEMLDEGVKPDHVTFVSLLS 396
Query: 617 NL----YAASGRWGDVSKVRLKMRDRGVK 641
+ G+W RL M++ G+K
Sbjct: 397 ACSHSGFVEEGKWC----FRL-MQEYGIK 420
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 161/339 (47%), Gaps = 31/339 (9%)
Query: 63 QWNVAITT---HM--RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
QWNV + HM R G A +F+ MP R S+NAMISG + NG A V D+
Sbjct: 147 QWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDE 206
Query: 118 M----PQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
M + + V+ V + Y + L +A +FE++P +DV+SWNT+++GYAQNG
Sbjct: 207 MRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGL 266
Query: 170 ADAARRIFDRMLEKNEI-----SWNGLLAAYVQNGRIEEACML----FESKANWEVVSWN 220
A A ++ M E EI +W +L AY G +++ + ++ + +V
Sbjct: 267 ASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVAT 326
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK 276
L+ + K RL DA +F ++P V+WN +I+ + + + + +LF +E
Sbjct: 327 CLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKP 386
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELF 332
D T+ +++S +G V+E + F M E + + M+ + ++MA +
Sbjct: 387 DHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFI 446
Query: 333 EAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQHD 370
+ M + AS W ++ G I + DR+ + D
Sbjct: 447 KDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 485
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 186/414 (44%), Gaps = 65/414 (15%)
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-----PQRDLVS------------- 125
F+ +P++ ++N+MIS Y+ NG A F Q+ + D +
Sbjct: 74 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 133
Query: 126 --------------WNVMISG-----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
WNV ++ Y R AR+LF+ MP RD+ SWN M+SG Q
Sbjct: 134 GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 193
Query: 167 NGYADAARRIFDRM----LEKNEISWNGLLAAYV----QNGRIEEACMLFESKANWEVVS 218
NG A A + D M ++ N ++ +L +V + G ++ A +FE +V+S
Sbjct: 194 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVIS 253
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEV-----SWNTMITGYAQNNYLAEAQ----RL 269
WN+L+ G+ + +A ++ M E+ +W +++ YA L + R+
Sbjct: 254 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 313
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+ DVF T ++ Y + G++ +A +F +P++++V+WNA+I+ + +
Sbjct: 314 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 373
Query: 330 ELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGY 381
+LF M + V ++ ++++ + SG + + F M ++ + ++
Sbjct: 374 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLL 433
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++GY E + +M + + S + ++L C ++ELGK +L +V
Sbjct: 434 GRAGYLEMAYDFIKDMPL---QPDASIWGALLGACRIHGNIELGKFASDRLFEV 484
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 121/282 (42%), Gaps = 28/282 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN-----AMISGYLLNGQLDPARQV 114
D+ WN IT + +NG A+ V+ M + N +++ Y G L ++
Sbjct: 250 DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKI 309
Query: 115 FDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
++ + D+ +I Y + L A +LF +P+ V+WN ++S + +G+A
Sbjct: 310 HGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHA 369
Query: 171 DAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
+ ++F ML++ + +++ LL+A +G +EE F + + G
Sbjct: 370 EKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCM 429
Query: 227 VK-QKRLGDAKWIFD---RMPVRDEVS-WNTM-----ITGYAQNNYLAEAQRLFEEAPVK 276
V R G + +D MP++ + S W + I G + A + RLF E K
Sbjct: 430 VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFA-SDRLF-EVDSK 487
Query: 277 DVFTWTAMVSGYVQNGK---VDEARMIFDAMPEKNTVSWNAM 315
+V + + + Y GK VD+ R + K T W+ +
Sbjct: 488 NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 529
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 282/852 (33%), Positives = 419/852 (49%), Gaps = 150/852 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + R GC + A+ VF+SM R ++S+N+ ISGY NG D A +F +M
Sbjct: 237 NALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKM-----W 291
Query: 125 SWNVMISGYVRNKSLSAARNL-FEMMPKRDVVSWNTMLSG-------------------- 163
S IS L A L FE++ K VV +M SG
Sbjct: 292 SEGTEISSVTVLSVLPACAELGFELVGK--VVHGYSMKSGLLWDLESVQSGIDEALGSKL 349
Query: 164 ---YAQNGYADAARRIFDRMLEKNEIS-WNGLLAAYVQNGRIEEACMLFESKANWEVVS- 218
Y + G +ARR+FD M K + WN ++ Y + EE+ +LFE +
Sbjct: 350 VFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPD 409
Query: 219 --------------------------------------WNSLMGGFVKQKRLGDAKWIFD 240
N+L+ + K + +A +FD
Sbjct: 410 EHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFD 469
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLF----------EEAPVKDVFTWTA------- 283
RMP +D +SWN++I+G N +EA LF + + V A
Sbjct: 470 RMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFV 529
Query: 284 --MVSGY-VQNGKVDEARM-------------------IFDAMPEKNTVSWNAMIAGYVQ 321
+V GY V+ G + E + IF M +KN VSW AMI Y +
Sbjct: 530 GRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTR 589
Query: 322 TKRMDMARELFEAMTC----KNVASWNTMITGYA-----QSGEITH-------------- 358
D L + M +V + +++ G+A + G+ H
Sbjct: 590 AGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPV 649
Query: 359 ----------------ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
AR +FD + D ISW +I GY+++ ++ +S LF +M
Sbjct: 650 ANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDM-LLQF 708
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ N T +L A+++SLE G+++H ++ GF + NAL+ MY KCG++ A
Sbjct: 709 KPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARV 768
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ + K++ISW MIAGY HG GKDA+ LFE M+ G++PD + IL AC H+GL
Sbjct: 769 LFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGL 828
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+G ++F +M ++Y + P KHYTC+VDLL G L EA +++MP EPD++ W +LL
Sbjct: 829 TAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLL 888
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
CR++ +LAEK A+ +F++EPEN G YVLL+N+YA + RW V K++ K+ RG+++
Sbjct: 889 HGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRE 948
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
TG SW+EV+ KVH F + HPE +RI +L+ + +++++G K L +
Sbjct: 949 NTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAV 1008
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
+ L HS KLAV +G+L +P GRPIRV KN +VC CH A K ISK+ R IILRD++
Sbjct: 1009 HDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSS 1068
Query: 763 RFHHFSGGSCSC 774
RFHHF GG CSC
Sbjct: 1069 RFHHFEGGRCSC 1080
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 153/605 (25%), Positives = 260/605 (42%), Gaps = 82/605 (13%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQR--DLVSWNVMISGYVRNKSLSAARNLFEMM 149
SV ++ YL G L AR VFD+MP R D+ W ++S Y + +LF M
Sbjct: 130 SVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQM 189
Query: 150 P----KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGR 200
D + + +L A G + +LEK + N L+A Y + G
Sbjct: 190 QCCGVSPDAHAVSCVLKCIASLGSITEG-EVIHGLLEKLGLGEACAVANALIALYSRCGC 248
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-PVRDEVSWNTMIT---- 255
+E+A +F+S + +SWNS + G+ A +F +M E+S T+++
Sbjct: 249 MEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPA 308
Query: 256 ---------GYAQNNYLAEAQRLFEEAPVK---DVFTWTAMVSGYVQNGKVDEARMIFDA 303
G + Y ++ L++ V+ D + +V YV+ G + AR +FDA
Sbjct: 309 CAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDA 368
Query: 304 MPEKNTVS-WNAMIAGYVQTKRMDMARELFEAM-------------------TC------ 337
MP K V WN ++ GY + + + LFE M TC
Sbjct: 369 MPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARD 428
Query: 338 --------------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
A N +I+ YA+S I +A +FDRMP D ISW ++I+G
Sbjct: 429 GLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTS 488
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G + +++ LF+ M G L+ + SVL CA +G+ +HG VK G +
Sbjct: 489 NGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSL 548
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
NALL MY C F + K+V+SW MI Y R G L + M GI
Sbjct: 549 ANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGI 608
Query: 504 KPDDITMVGILSACSHTGLVEKG-TEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
KPD + +L + +++G + + Y++ N ++P + ++++ ++E
Sbjct: 609 KPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVAN---ALMEMYVNCRNMEE 665
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA----AEVIFEMEPENAGMYVLLSN 617
A+ + ++ D +W L+G Y + A ++ ++++ + +P M +L
Sbjct: 666 ARLVFDHVT-NKDIISWNTLIGG---YSRNNFANESFSLFSDMLLQFKPNTVTMTCILPA 721
Query: 618 LYAAS 622
+ + S
Sbjct: 722 VASIS 726
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 21/236 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP---RRSSVSYNAMISGYLLNGQLDPARQVFD 116
DI WN I + RN + + +F+ M + ++V+ ++ L+ R++
Sbjct: 677 DIISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISSLERGREIHA 736
Query: 117 QMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+R D + N ++ YV+ +L AR LF+ + K++++SW M++GY +G
Sbjct: 737 YALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKD 796
Query: 173 ARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLM 223
A +F++M +E + S++ +L A +G E F E K ++ + ++
Sbjct: 797 AVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIV 856
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEAP 274
L +A + MP+ + S W +++ G ++ LAE A R+F+ P
Sbjct: 857 DLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEP 912
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA--G 440
Q+G +LRL G R + +V+ C SLE ++ H LV+ G G
Sbjct: 75 QAGDLAAALRLLGSDGGVGVR----SYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIG 129
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDK--DVISWNTMIAGYARHGFGKDALMLFESM 498
+G L++ Y KCG + A F+E+ + DV W ++++ YA+ G ++ + LF M
Sbjct: 130 SVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQM 189
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
+ G+ PD + +L + G + +G E + + G+ ++ L R G
Sbjct: 190 QCCGVSPDAHAVSCVLKCIASLGSITEG-EVIHGLLEKLGLGEACAVANALIALYSRCGC 248
Query: 559 LDEAQNLMKNMPFEPDAATWGALL 582
+++A + +M DA +W + +
Sbjct: 249 MEDAMQVFDSM-HARDAISWNSTI 271
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 269/798 (33%), Positives = 414/798 (51%), Gaps = 125/798 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+ I + +NG A VF + R +VS+ AM+SGY NG + A ++ QM + +V
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 125 SW---------------------------------------NVMISGYVRNKSLSAARNL 145
N +I+ Y+R S A +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F MP RD V++NT++SG+AQ G+ + A IF+ M L + ++ + LLAA G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 202 EEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
++ L F++ + + + SL+ +VK + A IF+ + V WN M+ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 258 AQNNYLAEAQRLF----------------------------------EEAPVKDVFTWTA 283
Q N LA++ LF VK F
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 284 MVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-- 336
VSG Y + G +++AR + + + EK+ VSW +MIAGYVQ + A F+ M
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 337 ---------------CK----------------------NVASWNTMITGYAQSGEITHA 359
C +V+ WN ++ YA+ G I A
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+ F+ + D I+W +++G+AQSG E++L++F+ M + G + N F S LS ANL
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A ++ GKQ+H +++K G VGNAL+ +Y KCGS E+A F E+ +++ +SWNT+I
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
++HG G +AL LF+ MK GIKP+D+T +G+L+ACSH GLVE+G YF SM+ +YG+
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P HY C++D+ GRAG+LD A+ ++ MP DA W LL AC+++ E+ E AA+
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAK 740
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP ++ YVLLSN YA + +W + +VR MRDRGV+K G SW+EV+N VH F
Sbjct: 741 HLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFF 800
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP ++IY +L + ++ + G+ + HD +E ++ HSEKLAV +G
Sbjct: 801 VGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFG 860
Query: 720 ILSIPAGRPIRVMKNLRV 737
++S+P P+RV+KNLRV
Sbjct: 861 LMSLPPCMPLRVIKNLRV 878
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 230/493 (46%), Gaps = 54/493 (10%)
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
R L K I N L+ Y +NG + A +FE + + VSW +++ G+ + +A +
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 239 FDRM----PVRDEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQ 290
+ +M V +++++ + A+ + + ++ ++F A+++ Y++
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------CKNVASW 343
G A +F MP ++TV++N +I+G+ Q + A E+FE M C ++S
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 344 --------------------------------NTMITGYAQSGEITHARNLFDRMPQHDC 371
+++ Y + G++ A +F+ + +
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ W ++ + Q S LF +M+ G R N+ + +L TC ++LG+Q+H
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
VK GFE+ +V L+ MY K G +E+A E + +KDV+SW +MIAGY +H KDA
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L F+ M+ GI PD+I + +S C+ + +G + ++ G + + +V+
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVN 489
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA-- 609
L R GR+ EA + + + + D TW L+ + ++ L E+A +V M+
Sbjct: 490 LYARCGRIREAFSSFEEIEHK-DEITWNGLVSG---FAQSGLHEEALKVFMRMDQSGVKH 545
Query: 610 GMYVLLSNLYAAS 622
++ +S L A++
Sbjct: 546 NVFTFVSALSASA 558
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 168/366 (45%), Gaps = 33/366 (9%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMISGYL 103
K+R + + D+ W I ++++ CC AL F M + ++ + ISG
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457
Query: 104 ----LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+ L +++ D+ WN +++ Y R + A + FE + +D ++WN
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
Query: 160 MLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESK 211
++SG+AQ+G + A ++F RM ++ N ++ L+A I++ + ++
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
++E N+L+ + K DAK F M R+EVSWNT+IT +Q+ EA LF+
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFD 637
Query: 272 EAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQT 322
+ + + T+ +++ G V+E F +M ++ + + +I + +
Sbjct: 638 QMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRA 697
Query: 323 KRMDMARELFEAM-TCKNVASWNTMITGYA-----QSGEITHARNLFDRMPQHDCISWAA 376
++D A++ E M + W T+++ + GE A++L + P HD S+
Sbjct: 698 GQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFA-AKHLLELEP-HDSASYVL 755
Query: 377 IIAGYA 382
+ YA
Sbjct: 756 LSNAYA 761
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 7/267 (2%)
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-ANLASLEL 424
M + S +AG+ L LF + R L F L C N ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
++H + V G VGN L+ +Y K G V A FEE+ +D +SW M++GYA+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
+G G++AL L+ M G+ P + +LS+C+ L +G ++ +G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
++ L R G A+ + +MP D T+ L+ + + E A E+ EM
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG---HAQCGHGEHALEIFEEM 235
Query: 605 EPEN-AGMYVLLSNLYAASGRWGDVSK 630
+ + V +S+L AA GD+ K
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQK 262
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/544 (41%), Positives = 346/544 (63%), Gaps = 16/544 (2%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM- 304
D V N ++ YA+ L EAQ LF++ P KD+ +WT ++SGY Q+G+ EA +F M
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198
Query: 305 -----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSG 354
P + T+S +G T D A + K NV ++++ YA+
Sbjct: 199 HLGFQPNEFTLSSLLKASG---TGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWA 255
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ A+ +F+ + + +SW A+IAG+A+ G E +RLF +M R G ++SVL+
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA 315
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA+ SLE GK +H ++K G + ++GN L+ MY K GS+++A F +V +D++S
Sbjct: 316 -CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVS 374
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WN++I+GYA+HG G +AL LFE M ++P++IT + +L+ACSH+GL+++G +Y++ +
Sbjct: 375 WNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELM 433
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ + + H+ +VDLLGRAGRL+EA ++ MP +P AA WGALLGACR++ +L
Sbjct: 434 KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLG 493
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
AAE IFE++P ++G +VLLSN+YA++GR D +KVR M++ GVKK SW+E++N+
Sbjct: 494 VYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENE 553
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
VH F D HP ++ I E++ K+K+ G+V T VL + ++++E L+YHSEKL
Sbjct: 554 VHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKL 613
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+ +L P G IR+ KN+R+C DCH+A K S+++GR II+RD NRFHHF G CSC
Sbjct: 614 ALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSC 673
Query: 775 GDYW 778
DYW
Sbjct: 674 RDYW 677
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 159/304 (52%), Gaps = 27/304 (8%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ DLV N +++ Y + SL A++LF+ MP +D+VSW ++SGY+Q+G A A +F +
Sbjct: 137 EDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 180 ML----EKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWE--VVSWNSLMGGFVK 228
ML + NE + + LL A +GR A F K ++ V +SL+ + +
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA---FSLKYGYDMNVHVGSSLLDMYAR 253
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAM 284
+ +AK IF+ + ++ VSWN +I G+A+ RLF + + FT++++
Sbjct: 254 WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSV 313
Query: 285 V----SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+ SG ++ GK A +I + N +I Y ++ + A+++F + +++
Sbjct: 314 LACASSGSLEQGKWVHAHVIKSGGQPIAYIG-NTLIDMYAKSGSIKDAKKVFRRLVKQDI 372
Query: 341 ASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
SWN++I+GYAQ G A LF++M Q + I++ +++ + SG ++ F
Sbjct: 373 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 432
Query: 397 MKRY 400
MK++
Sbjct: 433 MKKH 436
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 179/405 (44%), Gaps = 68/405 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N + + + G + A +F+ MP + VS+ +ISGY +GQ A +F +M
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198
Query: 119 -----PQRDLVSWNVMISG---------------------------------YVRNKSLS 140
P +S + SG Y R +
Sbjct: 199 HLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMR 258
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYV 196
A+ +F + ++VVSWN +++G+A+ G + R+F +ML E +++ +LA
Sbjct: 259 EAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLAC-A 317
Query: 197 QNGRIEEACMLFES--KANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+G +E+ + K+ + +++ N+L+ + K + DAK +F R+ +D VSWN+
Sbjct: 318 SSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNS 377
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+I+GYAQ+ AEA +LFE+ V T+ ++++ +G +DE + F+ M +
Sbjct: 378 IISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 437
Query: 309 TVSWNAMIAGYV-------QTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGE----I 356
A +A +V + R++ A + E M K A+ W ++ +
Sbjct: 438 I---EAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGV 494
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
A +F+ P HD + YA +G D+ ++ MK G
Sbjct: 495 YAAEQIFELDP-HDSGPHVLLSNIYASAGRLSDAAKVRKMMKESG 538
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
R+ ++ +L+ C L L+ G+ +H + FE + N +L MY KCGS+EEA F+
Sbjct: 105 RTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFD 164
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
++ KD++SW +I+GY++ G +AL LF M +G +P++ T+ +L A S TG +
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTGPSDH 223
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
++ + YG N + ++D+ R + EA+ + ++ + + +W AL+
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALIAGH 282
Query: 586 RLYGKTE 592
G+ E
Sbjct: 283 ARKGEGE 289
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 262/746 (35%), Positives = 403/746 (54%), Gaps = 68/746 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISGYVRNKSLSAARNLF-EMMPK-- 151
N++++ Y G + AR+VFD M RDLVSW M RN + A L EM+
Sbjct: 83 NSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGL 142
Query: 152 --------------------------------------RDVVSWNTMLSGYAQNGYADAA 173
DV ++ +A+NG AA
Sbjct: 143 RPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAA 202
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQ 229
R++F+ ++E+ + W ++ YVQ G +A LF E + + +S++ +Q
Sbjct: 203 RKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQ 262
Query: 230 KRLGDAKWIFD---RMPVRDEVSWNT----MITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
G + + R+ + + + M T + A+++F+ P +V +WT
Sbjct: 263 GSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWT 322
Query: 283 AMVSGYVQ-----NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
A++SGYVQ N V+ + + E N +++++++ D R++ +
Sbjct: 323 ALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMK 382
Query: 338 KNVASWNT----MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
++ + N +++ YA+SG + AR FD++ + + +S ++ I ++G S S
Sbjct: 383 TSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG---ETGRSNASWSS 439
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
IE G ++ F S+LS A + G+QLH +K GFE+ + N+L+ MY +
Sbjct: 440 QIESMDVG--VSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSR 497
Query: 454 CGSVEEAYHAFEEIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
CG +++A AF+E+ D +VISW ++I+ A+HG + AL LF M G+KP+D+T +
Sbjct: 498 CGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIA 557
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+LSACSH GLV++G EYF SM +D+ +IP +HY CMVDLL R+G + EA + MP +
Sbjct: 558 VLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCK 617
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
DA W LLGACR Y E+ E AA + ++EP++ YVLLSNLYA G W +V+++R
Sbjct: 618 ADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIR 677
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
MR R + K TG SW+ V N +H F GDT HP IYA L L ++K G+V T
Sbjct: 678 SLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTS 737
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
+VLHD+ ++ KE L HSEK+AVA+G+++ +PIR+ KNLRVC DCH+AIK+ISK
Sbjct: 738 IVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKST 797
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
GR IILRD+NRFH G CSCG+YW
Sbjct: 798 GREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 196/486 (40%), Gaps = 94/486 (19%)
Query: 57 GDW--DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
G W D+ I RNG +A VFN + R+ V + MI+ Y+ G A ++
Sbjct: 177 GFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVEL 236
Query: 115 FDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
F M + D + + M+S S + L ++ + +VS +T +S + Y
Sbjct: 237 FLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVS-DTCVSCGLVDMYT 295
Query: 171 --------DAARRIFDRMLEKNEISWNGLLAAYVQ-----NGRIEEACMLFESKANWEVV 217
+ AR++F RM N +SW L++ YVQ N +E C + +
Sbjct: 296 KLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHL 355
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+++SL+ + I R+ M T N +
Sbjct: 356 TYSSLLKACANLSDQDSGRQIHARV----------MKTSIGNVNVVG------------- 392
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY--------VQTKRMDMAR 329
A+VS Y ++G ++EAR FD + E+N +S ++ I Q + MD+
Sbjct: 393 ----NALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGV 448
Query: 330 ELFEAMTCKNVASW--------------------------NTMITGYAQSGEITHARNLF 363
F + + A+ N++++ Y++ G + A F
Sbjct: 449 STFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAF 508
Query: 364 DRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
D M H+ ISW +II+ A+ G++E +L LF +M G + N + +VLS C+++ +
Sbjct: 509 DEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLV 568
Query: 423 ELGK------QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISW 475
+ GK Q +L+ C V + + G V+EA E+ K D + W
Sbjct: 569 KEGKEYFRSMQKDHRLIPRMEHYACMVD-----LLARSGLVQEALEFINEMPCKADALVW 623
Query: 476 NTMIAG 481
T++
Sbjct: 624 KTLLGA 629
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 424 LGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD-KDVISWNTMIAG 481
LG+ LH +L+ +A V N+LL MY KCG V A F+ + +D++SW M
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
R+G ++AL+L M G++P+ T+ AC L G
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180
Query: 542 NSKHYTC-MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
C ++D+ R G L A+ + + E W ++ Y + A KA E+
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGL-VERTVVVWTLMITR---YVQGGCAGKAVEL 236
Query: 601 IFEM-----EPENAGMYVLLS 616
M EP+ M ++S
Sbjct: 237 FLGMLEDGFEPDGYTMSSMVS 257
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/543 (41%), Positives = 327/543 (60%), Gaps = 39/543 (7%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V D T +++ Y + G+ D AR +FDAM ++ +SWN MIAGY + A +LF
Sbjct: 88 VTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSR 147
Query: 335 M--------------------------TCKNVASW-------------NTMITGYAQSGE 355
M CK + + + YA+
Sbjct: 148 MHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNM 207
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I A +F+ MP+ ++W+++ AG+ Q+G E+ L LF +R G +L +S+LST
Sbjct: 208 IKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILST 267
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA+LA + G Q+H +VK GF FV +L+ +Y KCG +E++Y F ++ +K+V+ W
Sbjct: 268 CASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLW 327
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N MIA ++RH +A++LFE M+ VGI P+++T + ILSACSHTGLVE+G YF +
Sbjct: 328 NAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLS 387
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
D PN HY+CMVD+LGR+G+ DEA L+ MPFEP A+ WG+LLG+ R++ LA
Sbjct: 388 DRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLAR 447
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AAE +F +EPEN G +VLLSN+YAASG W +V R +RD G KK G SW+E + K+
Sbjct: 448 IAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKI 507
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F G+ HP +Y LEE+ ++++ +T+ LHDV ++KE +L++HSEKLA
Sbjct: 508 HVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLA 567
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
A+G++S+P PI + KNLR+C DCH+ +K +S I R +I+RD NRFHHF GSCSCG
Sbjct: 568 FAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCG 627
Query: 776 DYW 778
D+W
Sbjct: 628 DFW 630
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 151/331 (45%), Gaps = 25/331 (7%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
+V+ N +I+ Y GQ D AR+VFD M R ++SWN MI+GY N+ A LF M +
Sbjct: 91 TVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHR 150
Query: 152 RDVVSWNTMLSG--------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
LS YA L+ + L Y + I++
Sbjct: 151 EGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKD 210
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQ 259
AC +FE+ V+W+SL GFV+ + +F E + +++++ A
Sbjct: 211 ACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCAS 270
Query: 260 NNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
+ E + + + +++F T++V Y + G+++++ +F M EKN V WNAM
Sbjct: 271 LALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAM 330
Query: 316 IAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLF-----DRM 366
IA + + A LFE M N ++ ++++ + +G + R+ F DR
Sbjct: 331 IASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRT 390
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+ + + ++ ++ +SG ++++ +L +M
Sbjct: 391 AEPNVLHYSCMVDVLGRSGKTDEAWKLLDKM 421
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 137/322 (42%), Gaps = 78/322 (24%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
D V+ N +++ Y + G D ARR+FD M ++
Sbjct: 90 DTVTCNILINLYTKCGQNDCARRVFDAMSVRS---------------------------- 121
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQR 268
++SWN+++ G+ + +A +F RM E + ++ + A + E ++
Sbjct: 122 ---IISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQ 178
Query: 269 L----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
L + A F TA + Y + + +A +F+ MPEK +V+W+++ AG+VQ
Sbjct: 179 LHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGL 238
Query: 325 MDMARELFEAM-----------------TC----------------------KNVASWNT 345
+ LF++ TC +N+ +
Sbjct: 239 HEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATS 298
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ YA+ G+I + +F M + + + W A+IA +++ +S +++ LF +M++ G N
Sbjct: 299 LVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPN 358
Query: 406 RSPFTSVLSTCANLASLELGKQ 427
+ S+LS C++ +E G+
Sbjct: 359 EVTYLSILSACSHTGLVEEGRH 380
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L CA SL +GK HG + G N L+ +Y KCG + A F+ + +
Sbjct: 62 LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRS 121
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT-GLVEKGTEYF 530
+ISWNTMIAGY + +AL LF M G + + T+ L AC+ ++E +
Sbjct: 122 IISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIE--CKQL 179
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+++ + +S T +D+ + + +A + +NMP E + TW +L
Sbjct: 180 HTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP-EKTSVTWSSLFA 231
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/752 (33%), Positives = 403/752 (53%), Gaps = 97/752 (12%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+D W + ++ L+ AR +F+ +P D ++N ++ Y+ G AA ++ M
Sbjct: 31 KDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSM 90
Query: 181 L----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS-------LMGGFVKQ 229
L N+ ++ +L A + + C A+ V ++ L+ +++
Sbjct: 91 LYFRVPPNKYTFPFVLKA---CSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRC 147
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN---------------------------- 261
R G A +F +MP+RD V+WN M+ GYA +
Sbjct: 148 ARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSL 207
Query: 262 --YLAEAQRLFEEAPV-------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
LA+ LF+ V + V TA++ Y + + A +F M
Sbjct: 208 LPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV 267
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAM------------------TCKNVA------- 341
+N V+W+A+I G+V RM A LF+ M C ++A
Sbjct: 268 RNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ 327
Query: 342 ---------------SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ N++++ YA++G I A LFD + D IS+ A+++GY Q+G
Sbjct: 328 LHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGK 387
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+E++ +F +M+ + + + S++ C++LA+L+ G+ HG ++ G + N+
Sbjct: 388 AEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNS 447
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG ++ + F+++ +D++SWNTMIAGY HG GK+A LF SMK G +PD
Sbjct: 448 LIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPD 507
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
D+T + +++ACSH+GLV +G +F +M YG++P +HY CMVDLL R G LDEA +
Sbjct: 508 DVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFI 567
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
++MP + D WGALLGACR++ +L ++ + +I ++ PE G +VLLSN+++A+GR+
Sbjct: 568 QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFD 627
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+ ++VR+ + +G KK G SW+E+ +H F GD HP IY L+ + +K+ G
Sbjct: 628 EAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLG 687
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ T VL D+ EEEKE L YHSEKLA+A+G+LS+ + I V KNLRVC DCH AIK
Sbjct: 688 YQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIK 747
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+++ + R II+RD NRFHHF G CSCGD+W
Sbjct: 748 YMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 148/638 (23%), Positives = 245/638 (38%), Gaps = 175/638 (27%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D ++W + H+ G A VF+ +P + +YNA+I Y G A ++ M
Sbjct: 32 DNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSML 91
Query: 119 -----PQR---------------------------------DLVSWNVMISGYVRNKSLS 140
P + DL +I Y+R
Sbjct: 92 YFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFG 151
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNG-YADAARRIFDRM----LEKNEISWNGLLAAY 195
A N+F MP RDVV+WN ML+GYA +G Y A + D L N + LL
Sbjct: 152 PAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLL 211
Query: 196 VQNGRIEEA------CMLFESKANWE-VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
Q+G + + C+ N E V+ +L+ + K K L A +F M VR+EV
Sbjct: 212 AQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEV 271
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK-------------------------------- 276
+W+ +I G+ + + EA LF++ V+
Sbjct: 272 TWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHAL 331
Query: 277 --------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
D+ +++S Y + G ++EA M+FD + K+T+S+ A+++GYVQ + + A
Sbjct: 332 LAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEA 391
Query: 329 RELFEAM-----------------TCKNVASW----------------------NTMITG 349
+F+ M C ++A+ N++I
Sbjct: 392 FLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDM 451
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA+ G I +R +FD+MP D +SW +IAGY G +++ LF+ MK G + F
Sbjct: 452 YAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTF 511
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+++ C++ G V E H F+ +
Sbjct: 512 ICLIAACSH-----------------------------------SGLVTEGKHWFDTMTH 536
Query: 470 KDVI-----SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
K I + M+ AR GF +A +SM +K D +L AC ++
Sbjct: 537 KYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMP---LKADVRVWGALLGACRIHKNID 593
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
G + M + G + ++ + ++ AGR DEA
Sbjct: 594 LGKQ-VSRMIQKLGP-EGTGNFVLLSNIFSAAGRFDEA 629
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/474 (44%), Positives = 310/474 (65%), Gaps = 1/474 (0%)
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
E++ N+++ Y ++ AR +F+ M +V SW MI GY + G+ AR LFDR
Sbjct: 149 EQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDR 208
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
MP+ + ++W+ +I+GYA++ E ++ F ++ G N + V+S+CA+L +L +G
Sbjct: 209 MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMG 268
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
++ H +++ +G A++ MY +CG+VE+A FE++ +KDV+ W +IAG A H
Sbjct: 269 EKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMH 328
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G+ + AL F M G P DIT +L+ACSH G+VE+G E F SM RD+GV P +H
Sbjct: 329 GYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEH 388
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y CMVDLLGRAG+L +A+ + MP +P+A W ALLGACR++ E+ E+ +++ EM+
Sbjct: 389 YGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQ 448
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
PE +G YVLLSN+YA + +W DV+ +R M+D+GV+K GYS +E+ KVH F++GD H
Sbjct: 449 PEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTH 508
Query: 666 PEKDRIYAYLEELEF-KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
PE ++I E++ K+K G+V +T + D+ EEEKE L HSEKLA+AYGI+ I
Sbjct: 509 PEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIR 568
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A PIR++KNLRVCEDCH A K ISK+ +I+RD NRFHHF G+CSC DYW
Sbjct: 569 APTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 137/265 (51%), Gaps = 17/265 (6%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
++D N ++ Y ++AAR++F+ M + DVVSW M++GY + G A +AR +FDR
Sbjct: 149 EQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDR 208
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M E+N ++W+ +++ Y +N E+A FE+ VV+ ++M G + A +
Sbjct: 209 MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMG 268
Query: 240 DRM---PVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
++ +R+++S N ++ YA+ + +A +FE+ P KDV WTA+++G +
Sbjct: 269 EKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMH 328
Query: 292 GKVDEARMIFDAMPEKNTV----SWNAMIAGYVQTKRMDMARELFEAMTCKN-----VAS 342
G ++A F M +K V ++ A++ ++ E+FE+M + +
Sbjct: 329 GYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEH 388
Query: 343 WNTMITGYAQSGEITHARNLFDRMP 367
+ M+ ++G++ A +MP
Sbjct: 389 YGCMVDLLGRAGKLRKAEKFVLKMP 413
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 39/255 (15%)
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
+ A+I G + S E+S +I+ R+G + ++ CA L + +G Q HGQ +
Sbjct: 85 YNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAI 144
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K GFE +V N+L+ MY G + A F+ + DV+SW MIAGY R G K A
Sbjct: 145 KHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARE 204
Query: 494 L-------------------------------FESMKTVGIKPDDITMVGILSACSHTGL 522
L FE+++ G+ ++ MVG++S+C+H G
Sbjct: 205 LFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGA 264
Query: 523 V---EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+ EK EY +I T +VD+ R G +++A + + +P E D W
Sbjct: 265 LAMGEKAHEYVMRNKLSLNLILG----TAVVDMYARCGNVEKAVMVFEQLP-EKDVLCWT 319
Query: 580 ALLGACRLYGKTELA 594
AL+ ++G E A
Sbjct: 320 ALIAGLAMHGYAEKA 334
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 170/363 (46%), Gaps = 27/363 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N+++ Y G ++ AR VF +M + D+VSW MI+GY R +AR LF+ MP+R++V
Sbjct: 156 NSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLV 215
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI---EEAC-ML 207
+W+TM+SGYA+N + A F+ + + NE G++++ G + E+A +
Sbjct: 216 TWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYV 275
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+K + ++ +++ + + + A +F+++P +D + W +I G A + Y +A
Sbjct: 276 MRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKAL 335
Query: 268 RLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAG 318
F E K T+TA+++ G V+ IF++M + V + M+
Sbjct: 336 WYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDL 395
Query: 319 YVQTKRMDMARELFEAMTCK-NVASWNTM-----ITGYAQSGEITHARNLFDRMPQHDCI 372
+ ++ A + M K N W + I + GE + L + P++
Sbjct: 396 LGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERV-GKILLEMQPEYSG- 453
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+ + YA++ +D + MK G R + P S++ + +G + H ++
Sbjct: 454 HYVLLSNIYARANKWKDVTVMRQMMKDKGVR--KPPGYSLIEIDGKVHEFTIGDKTHPEI 511
Query: 433 VKV 435
K+
Sbjct: 512 EKI 514
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 20/280 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ D N + + G ++A VF M R VS+ MI+GY G AR++FD+
Sbjct: 149 EQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDR 208
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+R+LV+W+ MISGY RN A FE + VV+ T++ G + A +
Sbjct: 209 MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMG 268
Query: 178 DRMLE---KNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
++ E +N++S N +L Y + G +E+A M+FE +V+ W +L+ G
Sbjct: 269 EKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMH 328
Query: 230 KRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD------VF 279
A W F M V ++++ ++T + + +FE +D +
Sbjct: 329 GYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMK-RDHGVEPRLE 387
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAG 318
+ MV + GK+ +A MP K N W A++
Sbjct: 388 HYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGA 427
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 90/235 (38%), Gaps = 41/235 (17%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
++P +L C+N L++ +H +++ F + L + +C + ++A
Sbjct: 17 KNPKLVLLECCSNARDLKI---IHAHMLRTHLFFDVFAASRL-IAFCIDSTTNLLHYAIR 72
Query: 466 ---EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH--- 519
+I + ++ +N +I G + +++ + G+ PD+IT ++ AC+
Sbjct: 73 VASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLEN 132
Query: 520 --TGLVEKGTEYFYSMNRDYGVIPNSKH-------------------------YTCMVDL 552
G+ G + +D+ V + H +TCM+
Sbjct: 133 APMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAG 192
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
R G A+ L MP E + TW ++ Y + EKA E ++ E
Sbjct: 193 YHRCGDAKSARELFDRMP-ERNLVTWSTMISG---YARNNCFEKAVETFEALQAE 243
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/568 (38%), Positives = 339/568 (59%), Gaps = 41/568 (7%)
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------- 304
+++ YA++ L +A LF+E P +D++ ++++++ + + A I M
Sbjct: 125 ALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALH 184
Query: 305 PEKNTVSWNAMIAGYVQTKRM---------------------------------DMAREL 331
P+ +S A + ++++R+ D R++
Sbjct: 185 PDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKV 244
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F++M+ KN W +++GYA +G A LF MP + +W A+I+G +G S ++
Sbjct: 245 FDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAV 304
Query: 392 RLFIEMKRYGERLNRSPFTS-VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
LF+EM+R G R++ + S V+ A+LA+ LG+QLHG +++GF + VGNAL+ M
Sbjct: 305 ELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDM 364
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KC + A FE I +DVISW TM+ G A+HG ++AL L++ M G KP+++T
Sbjct: 365 YSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTF 424
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
VG++ ACSH GLV+KG + F SM +YG+ P +HYTC +DLL R+G L EA+ LM MP
Sbjct: 425 VGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMP 484
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
+EPD ATWGALL AC Y E+ + ++ + E+ P+++ Y+LLSN+YA +G+W V+K
Sbjct: 485 YEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAK 544
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
VR M ++K GYSW+E + F G+ ++ I +LEE+ ++++ G+V
Sbjct: 545 VRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPD 604
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
T V+HD+ E EKEH L HSE+LAVA+G++ P G IRV+KNLRVC DCH +K IS+
Sbjct: 605 TSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISE 664
Query: 751 IVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I R I++RD++RFHHF GG CSC ++W
Sbjct: 665 ITHRKIVVRDSSRFHHFEGGKCSCSEFW 692
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 189/408 (46%), Gaps = 24/408 (5%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
++S Y +++ L A +LF+ P+RD+ ++++L+ + + + A I ML + +
Sbjct: 126 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 185
Query: 189 NGLLAAYVQN--GRIEEACMLFESKANWEVVSWN-------SLMGGFVKQKRLGDAKWIF 239
+ + + V + R+ + + A++ V +N SL+ + K D + +F
Sbjct: 186 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVF 245
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
D M ++ V W +++GYA N EA +LF P +++F WTA++SG V G+ A
Sbjct: 246 DSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVE 305
Query: 300 IF-----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGY 350
+F D + + + +I G + R+L + N+ N +I Y
Sbjct: 306 LFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMY 365
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
++ +I AR +F+ + D ISW ++ G AQ G +E++L L+ M G + N F
Sbjct: 366 SKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 425
Query: 411 SVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-V 468
++ C++ ++ G+QL + + G L + + G + EA +
Sbjct: 426 GLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPY 485
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFE-SMKTVGIKPDDITMVGILS 515
+ D +W +++ ++ KDA M S K + ++P D + +LS
Sbjct: 486 EPDEATWGALLSACTKY---KDAEMCIRISDKLLELRPKDSSTYILLS 530
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 166/385 (43%), Gaps = 59/385 (15%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
++ + ++ ALH+F+ PRR Y+++++ + + A + M D + +
Sbjct: 127 VSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPD 186
Query: 128 VMI-----SGYVRNKSLSAARNL---FEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFD 178
+ S + R +S R L F + P D V ++++ Y + G D R++FD
Sbjct: 187 HFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFD 246
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG------------- 225
M KN + W L++ Y NGR EEA LF S + +W +L+ G
Sbjct: 247 SMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVEL 306
Query: 226 FVKQKRLGD------------------AKWIFDRMP---------VRDEVSWNTMITGYA 258
FV+ +R G A ++ R + + + N +I Y+
Sbjct: 307 FVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYS 366
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNA 314
+ + + A+ +FE +DV +WT MV G Q+G+ +EA ++D M + N V++
Sbjct: 367 KCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVG 426
Query: 315 MIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMP-Q 368
+I + R+LFE+M + + + ++SG + A L MP +
Sbjct: 427 LIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYE 486
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRL 393
D +W A+++ + +E +R+
Sbjct: 487 PDEATWGALLSACTKYKDAEMCIRI 511
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 57/296 (19%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD- 122
W ++ + NG + AL +F SMP R+ ++ A+ISG + G+ A ++F +M +RD
Sbjct: 256 WTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEM-RRDG 314
Query: 123 ----------------------------------------LVSWNVMISGYVRNKSLSAA 142
++ N +I Y + + +A
Sbjct: 315 VRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSA 374
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQN 198
R +FE + RDV+SW TM+ G AQ+G A+ A ++DRM+ + NE+++ GL+ A
Sbjct: 375 REVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHA 434
Query: 199 GRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNT 252
G +++ LFES N ++ + + + L +A+ + MP DE +W
Sbjct: 435 GLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGA 494
Query: 253 MITGYAQNN----YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+++ + + + +L E P KD T+ + + Y NGK D + M
Sbjct: 495 LLSACTKYKDAEMCIRISDKLLELRP-KDSSTYILLSNVYAVNGKWDSVAKVRKCM 549
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/561 (40%), Positives = 333/561 (59%), Gaps = 39/561 (6%)
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
Y + + EA F P++++ + +++G+VQ+G +D A +FD M E+N +WNAM+
Sbjct: 2 YFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMV 61
Query: 317 AGYVQTKRMDMARELFEAM-----------------TCK--------------------- 338
+G +Q + + LF M C
Sbjct: 62 SGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYE 121
Query: 339 -NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
N+ +++ Y +SG + + M + ++W +IAG AQ+G+ E L L+ M
Sbjct: 122 FNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMM 181
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
K G R ++ SV+S+ A LA+L G+Q+H + +K G + V ++L+ MY KCG +
Sbjct: 182 KMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCL 241
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E++ A + D + W++MIA Y HG G++A+ LFE M+ G+ +D+T + +L AC
Sbjct: 242 EDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYAC 301
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
SH GL EKG +F M YG+ P +HYTC+VDLLGR+G LDEA+ ++++MP E D
Sbjct: 302 SHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVI 361
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
W LL ACR++ ++A + AE I + P+++ YVLLSN++A++ RW DVSKVR MRD
Sbjct: 362 WKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRD 421
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD 697
R VKK G SWLEV+N+V FS+GD HP + I YL+EL ++K G+V T V HD
Sbjct: 422 RNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHD 481
Query: 698 VGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
EEKE+ L HSEKLA+A+G+++IP G PIRVMKNLR+C DCH AIK IS I R II
Sbjct: 482 TDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREII 541
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
+RD +RFHHF G CSCGDYW
Sbjct: 542 VRDTSRFHHFKHGKCSCGDYW 562
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 167/360 (46%), Gaps = 44/360 (12%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
+ + G A+ FN+MP R+ +S+N +I+G++ +G LD A +VFD+M +R++ +WN M+
Sbjct: 2 YFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMV 61
Query: 131 SGYVR----NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
SG ++ L R + E+ D + ++L G A
Sbjct: 62 SGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCA--------------------- 100
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
GL A+Y G+ A +L + + +V +SL ++K LG+ + + M +R+
Sbjct: 101 ---GLRASYA--GKQVHAYVL-KYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRN 154
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFD 302
V+WNT+I G AQN + L+ + D T +++S + + + + I
Sbjct: 155 VVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHA 214
Query: 303 AMPEKNTVSWNAMIAGYVQ--TKRMDMARELFEAMTCKNVAS--WNTMITGYAQSGEITH 358
+ S A+++ + +K + + + C++ S W++MI Y G
Sbjct: 215 EAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEE 274
Query: 359 ARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLF-IEMKRYGERLNRSPFTSVL 413
A +LF++M Q +++ +++ + +G E + F + +++YG + +T V+
Sbjct: 275 AVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVV 334
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 146/349 (41%), Gaps = 61/349 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
+I N+ I H+++G DSA+ VF+ M R+ ++NAM+SG + + +F +M
Sbjct: 22 NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
+ +LV + + Y+++ SL
Sbjct: 82 ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLG 141
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF----------DRMLEKNEISWNG 190
+ + M R+VV+WNT+++G AQNG+ + ++ D++ + IS +
Sbjct: 142 EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSA 201
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
LA Q +I + ++ AN V +SL+ + K L D+ D V W
Sbjct: 202 ELATLFQGQQIHAEAI--KAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLW 259
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++MI Y + EA LFE+ + + T+ +++ NG ++ F M E
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVE 319
Query: 307 KNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG 349
K + + ++ ++ +D A + +M + +V W T+++
Sbjct: 320 KYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 18/231 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVF 115
++ WN I + +NG + L ++N M R ++ ++IS L +Q+
Sbjct: 154 NVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIH 213
Query: 116 DQM----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + + +IS Y + L + D V W++M++ Y +G +
Sbjct: 214 AEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGE 273
Query: 172 AARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW-----EVVSWNSL 222
A +F++M L N++++ LL A NG E+ F+ + + +
Sbjct: 274 EAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCV 333
Query: 223 MGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ + L +A+ + MP+ D V W T+++ + A R EE
Sbjct: 334 VDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEE 384
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/644 (35%), Positives = 383/644 (59%), Gaps = 18/644 (2%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
D+ N++++ Y++ G + AR++FDRML++N +SW+ L+ Y+ G + E LF +
Sbjct: 60 DITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLV 119
Query: 213 NWEVVSWNSLMGGFV-----KQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ + N + V R+ + K ++ + + N +I Y++ ++
Sbjct: 120 SLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHV 179
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGY 319
A ++ + P DVF++ +++S V++G EA + M ++ ++V++ +++
Sbjct: 180 DSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLC 239
Query: 320 VQTKRMDMA----RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
Q + + + +L + +V +T+I Y + GE+ +AR FD + + ++W
Sbjct: 240 AQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWT 299
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A++ Y Q+G+ E++L LF +M+ R N F +L+ CA+L +L G LHG++V
Sbjct: 300 AVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMS 359
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
GF+ VGNAL+ MY K G+++ +Y+ F ++++DVI+WN MI GY+ HG GK AL++F
Sbjct: 360 GFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVF 419
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ M + G P+ +T +G+LSAC H LV++G YF + + + V P +HYTCMV LLGR
Sbjct: 420 QDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGR 479
Query: 556 AGRLDEAQNLMKNMP-FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
AG LDEA+N MK + D W LL AC ++ L ++ E + +M+P + G Y L
Sbjct: 480 AGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTL 539
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
LSN++A + +W V K+R M++R +KK G SWL+++N H F + HPE +I+
Sbjct: 540 LSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEK 599
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
+++L +K G+ +VLHDV +E+KE L +HSEKLA+AYG++ IP PIR++KN
Sbjct: 600 VQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKN 659
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LR+C+DCH A+K ISK RLII+RD NRFHHF G C+C D+W
Sbjct: 660 LRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 218/500 (43%), Gaps = 68/500 (13%)
Query: 79 SALHVFNSMPRRSSVS-YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
+ L V N + S ++ N++I+ Y GQ AR++FD+M QR++VSW+ ++ GY+
Sbjct: 47 AQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKG 106
Query: 138 SLSAARNLFEMMPKRDVVSWN-----TMLSGYAQNGYADAARRIFDRMLEK----NEISW 188
+ LF + D N +LS A +G ++ +L+ ++
Sbjct: 107 EVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVK 166
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PV 244
N L+ Y + ++ A + ++ +V S+NS++ V+ G+A + RM +
Sbjct: 167 NALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVI 226
Query: 245 RDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
D V++ +++ AQ L +L + V DVF + ++ Y + G+V AR
Sbjct: 227 WDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQ 286
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW 343
FD + ++N V+W A++ Y+Q + LF M C ++ +
Sbjct: 287 FDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVAL 346
Query: 344 ----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
N +I Y++SG I + N+F M D I+W A+I GY
Sbjct: 347 AYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGY 406
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAG 440
+ G + +L +F +M GE N F VLS C +LA ++ G Q++ K E G
Sbjct: 407 SHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPG 466
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEI--VDKDVISWNTMIAGYARH---GFGKDALMLF 495
++ + + G ++EA + + V DV++W T++ H GK
Sbjct: 467 LEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQI---- 522
Query: 496 ESMKTVGIKPDDITMVGILS 515
+ + + P D+ +LS
Sbjct: 523 -TETVIQMDPHDVGTYTLLS 541
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 144/338 (42%), Gaps = 31/338 (9%)
Query: 71 HMRNGC--CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLV 124
HM + C DSA+ + +++P SYN+++S + +G A QV +M D V
Sbjct: 171 HMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSV 230
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM 180
++ ++ + + L + + K DV +T++ Y + G AR+ FD +
Sbjct: 231 TYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGL 290
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS-----LMGGFVKQKRLGDA 235
++N ++W +L AY+QNG EE LF +K E N L+ L
Sbjct: 291 RDRNVVAWTAVLTAYLQNGHFEETLNLF-TKMELEDTRPNEFTFAVLLNACASLVALAYG 349
Query: 236 KWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
+ R+ + + N +I Y+++ + + +F +DV TW AM+ GY +
Sbjct: 350 DLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHH 409
Query: 292 GKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVAS 342
G +A ++F M N V++ +++ V + F+ + K +
Sbjct: 410 GLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEH 469
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQH--DCISWAAII 378
+ M+ ++G + A N Q D ++W ++
Sbjct: 470 YTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLL 507
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 26/275 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISG-----YLLNGQL 108
D ++ W +T +++NG + L++F M R + ++ +++ L G L
Sbjct: 292 DRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDL 351
Query: 109 DPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
R V + L+ N +I+ Y ++ ++ ++ N+F M RDV++WN M+ GY+ +G
Sbjct: 352 LHGRIVMSGF-KNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHG 410
Query: 169 YADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIEEACMLFES-KANWEV---VSWN 220
A +F M+ E +++ G+L+A V ++E F+ ++V +
Sbjct: 411 LGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHY 470
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR---DEVSWNTMITG-YAQNNYLAEAQ---RLFEEA 273
+ M + + L D F + + D V+W T++ + NY Q + +
Sbjct: 471 TCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMD 530
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
P DV T+T + + + + K D I M E+N
Sbjct: 531 P-HDVGTYTLLSNMHAKARKWDGVVKIRKLMKERN 564
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 410 TSVLSTCANLASLELGKQLHGQLV---KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
++L A SL GK +H QLV + ++ N+L+ +Y KCG + A F+
Sbjct: 27 VNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDR 86
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEK 525
++ ++V+SW+ ++ GY G + L LF ++ ++ P++ +LS C+ +G V++
Sbjct: 87 MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + + + G++ + ++ + R +D A ++ +P + D ++ ++L A
Sbjct: 147 GKQCHGYLLKS-GLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGD-DVFSYNSILSA 203
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/568 (38%), Positives = 339/568 (59%), Gaps = 41/568 (7%)
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------- 304
+++ YA++ L +A LF+E P +D++ ++++++ + + A I M
Sbjct: 43 ALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALH 102
Query: 305 PEKNTVSWNAMIAGYVQTKRM---------------------------------DMAREL 331
P+ +S A + ++++R+ D R++
Sbjct: 103 PDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKV 162
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F++M+ KN W +++GYA +G A LF MP + +W A+I+G +G S ++
Sbjct: 163 FDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAV 222
Query: 392 RLFIEMKRYGERLNRSPFTS-VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
LF+EM+R G R++ + S V+ A+LA+ LG+QLHG +++GF + VGNAL+ M
Sbjct: 223 ELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDM 282
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KC + A FE I +DVISW TM+ G A+HG ++AL L++ M G KP+++T
Sbjct: 283 YSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTF 342
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
VG++ ACSH GLV+KG + F SM +YG+ P +HYTC +DLL R+G L EA+ LM MP
Sbjct: 343 VGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMP 402
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
+EPD ATWGALL AC Y E+ + ++ + E+ P+++ Y+LLSN+YA +G+W V+K
Sbjct: 403 YEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAK 462
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
VR M ++K GYSW+E + F G+ ++ I +LEE+ ++++ G+V
Sbjct: 463 VRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPD 522
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
T V+HD+ E EKEH L HSE+LAVA+G++ P G IRV+KNLRVC DCH +K IS+
Sbjct: 523 TSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISE 582
Query: 751 IVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I R I++RD++RFHHF GG CSC ++W
Sbjct: 583 ITHRKIVVRDSSRFHHFEGGKCSCSEFW 610
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 189/408 (46%), Gaps = 24/408 (5%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
++S Y +++ L A +LF+ P+RD+ ++++L+ + + + A I ML + +
Sbjct: 44 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 103
Query: 189 NGLLAAYVQN--GRIEEACMLFESKANWEVVSWN-------SLMGGFVKQKRLGDAKWIF 239
+ + + V + R+ + + A++ V +N SL+ + K D + +F
Sbjct: 104 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVF 163
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
D M ++ V W +++GYA N EA +LF P +++F WTA++SG V G+ A
Sbjct: 164 DSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVE 223
Query: 300 IF-----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGY 350
+F D + + + +I G + R+L + N+ N +I Y
Sbjct: 224 LFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMY 283
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
++ +I AR +F+ + D ISW ++ G AQ G +E++L L+ M G + N F
Sbjct: 284 SKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 343
Query: 411 SVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-V 468
++ C++ ++ G+QL + + G L + + G + EA +
Sbjct: 344 GLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPY 403
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFE-SMKTVGIKPDDITMVGILS 515
+ D +W +++ ++ KDA M S K + ++P D + +LS
Sbjct: 404 EPDEATWGALLSACTKY---KDAEMCIRISDKLLELRPKDSSTYILLS 448
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 166/385 (43%), Gaps = 59/385 (15%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
++ + ++ ALH+F+ PRR Y+++++ + + A + M D + +
Sbjct: 45 VSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPD 104
Query: 128 VMI-----SGYVRNKSLSAARNL---FEMMPKR-DVVSWNTMLSGYAQNGYADAARRIFD 178
+ S + R +S R L F + P D V ++++ Y + G D R++FD
Sbjct: 105 HFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFD 164
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG------------- 225
M KN + W L++ Y NGR EEA LF S + +W +L+ G
Sbjct: 165 SMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVEL 224
Query: 226 FVKQKRLGD------------------AKWIFDRMP---------VRDEVSWNTMITGYA 258
FV+ +R G A ++ R + + + N +I Y+
Sbjct: 225 FVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYS 284
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNA 314
+ + + A+ +FE +DV +WT MV G Q+G+ +EA ++D M + N V++
Sbjct: 285 KCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVG 344
Query: 315 MIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMP-Q 368
+I + R+LFE+M + + + ++SG + A L MP +
Sbjct: 345 LIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYE 404
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRL 393
D +W A+++ + +E +R+
Sbjct: 405 PDEATWGALLSACTKYKDAEMCIRI 429
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 57/296 (19%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD- 122
W ++ + NG + AL +F SMP R+ ++ A+ISG + G+ A ++F +M +RD
Sbjct: 174 WTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEM-RRDG 232
Query: 123 ----------------------------------------LVSWNVMISGYVRNKSLSAA 142
++ N +I Y + + +A
Sbjct: 233 VRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSA 292
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQN 198
R +FE + RDV+SW TM+ G AQ+G A+ A ++DRM+ + NE+++ GL+ A
Sbjct: 293 REVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHA 352
Query: 199 GRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNT 252
G +++ LFES N ++ + + + L +A+ + MP DE +W
Sbjct: 353 GLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGA 412
Query: 253 MITGYAQNN----YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+++ + + + +L E P KD T+ + + Y NGK D + M
Sbjct: 413 LLSACTKYKDAEMCIRISDKLLELRP-KDSSTYILLSNVYAVNGKWDSVAKVRKCM 467
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/543 (42%), Positives = 329/543 (60%), Gaps = 9/543 (1%)
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
++D V N ++ YAQ+ + +A LF+ ++D TW+ MV G+ + G F
Sbjct: 32 LQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRE 91
Query: 304 MPEKNTVSWNAMIAGYVQTKR----MDMARELFEAMTCKNVAS----WNTMITGYAQSGE 355
+ N + ++T R + + R + + + + S +++ YA+
Sbjct: 92 LLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIV 151
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ A+ LF+RM D ++W +I YA E SL LF M+ G ++ +V++
Sbjct: 152 VEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLVLFDRMREEGVVPDKVAMVTVVNA 210
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA L ++ + + +V+ GF +G A++ MY KCGSVE A F+ + +K+VISW
Sbjct: 211 CAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISW 270
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+ MIA Y HG GKDA+ LF M + I P+ +T V +L ACSH GL+E+G +F SM
Sbjct: 271 SAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWE 330
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
++ V P+ KHYTCMVDLLGRAGRLDEA L++ M E D W ALLGACR++ K ELAE
Sbjct: 331 EHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAE 390
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
KAA + E++P+N G YVLLSN+YA +G+W V+K R M R +KK+ G++W+EV NK
Sbjct: 391 KAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKT 450
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
+ FSVGD HP+ IY L L KL+ G+V T VL DV EE K+ ML HSEKLA
Sbjct: 451 YQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLA 510
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+A+G+++IP G PIR+ KNLRVC DCH K +S I+ R II+RD NRFHHF+ G+CSCG
Sbjct: 511 IAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCG 570
Query: 776 DYW 778
DYW
Sbjct: 571 DYW 573
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 16/293 (5%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
T +++ N ++ YAQ I A +LFD + D +W+ ++ G+A++G F
Sbjct: 31 TLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFR 90
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
E+ R G + V+ TC + L++G+ +H ++K G + FV +L+ MY KC
Sbjct: 91 ELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCI 150
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
VE+A FE ++ KD+++W MI YA ++L+LF+ M+ G+ PD + MV +++
Sbjct: 151 VVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMVTVVN 209
Query: 516 ACSHTGLVEK---GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
AC+ G + + +Y VI T M+D+ + G ++ A+ + M E
Sbjct: 210 ACAKLGAMHRARFANDYIVRNGFSLDVILG----TAMIDMYAKCGSVESAREVFDRMK-E 264
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAAS 622
+ +W A++ A +G+ K A +F M A + +S LYA S
Sbjct: 265 KNVISWSAMIAAYGYHGRG----KDAIDLFHMMLSCAILPNRVTFVSLLYACS 313
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 175/381 (45%), Gaps = 33/381 (8%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
HV + + V N ++ Y + +D A +FD + RD +W+VM+ G+ + +
Sbjct: 25 HVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAG 84
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGY----ADAARRIFDRMLEKNEISWNGLLAA--- 194
F + + V N L + R I D +L+ +S + + A+
Sbjct: 85 CYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVD 144
Query: 195 -YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVS 249
Y + +E+A LFE + ++V+W ++G + ++ +FDRM V D+V+
Sbjct: 145 MYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMREEGVVPDKVA 203
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
T++ A+ + A R + V+ DV TAM+ Y + G V+ AR +FD M
Sbjct: 204 MVTVVNACAKLGAMHRA-RFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRM 262
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAM-TCK---NVASWNTMITGYAQSGEITHAR 360
EKN +SW+AMIA Y R A +LF M +C N ++ +++ + +G I
Sbjct: 263 KEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGL 322
Query: 361 NLFDRM-PQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLS 414
F+ M +H D + ++ ++G +++LRL M ERL ++++L
Sbjct: 323 RFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERL----WSALLG 378
Query: 415 TCANLASLELGKQLHGQLVKV 435
C + +EL ++ L+++
Sbjct: 379 ACRIHSKMELAEKAANSLLEL 399
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 76/309 (24%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKS-------------------------LSAA 142
++ A+++F++M +DLV+W VMI Y + ++A
Sbjct: 152 VEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLVLFDRMREEGVVPDKVAMVTVVNAC 211
Query: 143 RNLFEMMPKR-------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
L M R DV+ M+ YA+ G ++AR +FDRM EKN ISW+
Sbjct: 212 AKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWS 271
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
++AAY +GR ++A LF + + +P R V+
Sbjct: 272 AMIAAYGYHGRGKDAIDLFHMMLSCAI-------------------------LPNR--VT 304
Query: 250 WNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+ +++ + + E R F E A DV +T MV + G++DEA + +AM
Sbjct: 305 FVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAM 364
Query: 305 P-EKNTVSWNAMIAGYVQTKRMDMARE----LFEAMTCKNVASWNTMITGYAQSGEITHA 359
EK+ W+A++ +M++A + L E + +N + + YA++G+
Sbjct: 365 TVEKDERLWSALLGACRIHSKMELAEKAANSLLE-LQPQNPGHYVLLSNIYAKAGKWEKV 423
Query: 360 RNLFDRMPQ 368
D M Q
Sbjct: 424 AKFRDMMTQ 432
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L C N+ + +Q+H +V G + N LL Y + ++++AY F+ + +D
Sbjct: 9 LLLRCRNVFHI---RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRD 65
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
+W+ M+ G+A+ G F + G+ PD+ T+ ++ C ++ G +
Sbjct: 66 SKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIG-RVIH 124
Query: 532 SMNRDYGVIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA---CR 586
+ +G++ S H+ C +VD+ + +++AQ L + M D TW ++GA C
Sbjct: 125 DVVLKHGLL--SDHFVCASLVDMYAKCIVVEDAQRLFERM-LSKDLVTWTVMIGAYADCN 181
Query: 587 LYGKTELAEKAAE 599
Y L ++ E
Sbjct: 182 AYESLVLFDRMRE 194
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ I + + G +SA VF+ M ++ +S++AMI+ Y +G+ A +F M
Sbjct: 235 DVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMML 294
Query: 119 -----PQRDLVSWNVMISGYVRNKSLSAARNLFEMM-----PKRDVVSWNTMLSGYAQNG 168
P R V++ ++ + F M + DV + M+ + G
Sbjct: 295 SCAILPNR--VTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAG 352
Query: 169 YADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
D A R+ + M +EK+E W+ LL A RI L E AN
Sbjct: 353 RLDEALRLIEAMTVEKDERLWSALLGA----CRIHSKMELAEKAAN 394
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/559 (39%), Positives = 338/559 (60%), Gaps = 12/559 (2%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNY-LAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
L DA + +P D S+NT++ ++ LA A+ LF+ P +D F+W+A+VS + +
Sbjct: 77 LPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHAR 136
Query: 291 NGKVDEARMIFDAMPEK-------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS- 342
+G+ A I+ M + N + ++ +A + REL + + + +
Sbjct: 137 HGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDAD 196
Query: 343 ---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
W+ + YA+ G + AR++FDRMP D +SW A++ Y + + RLF+ M R
Sbjct: 197 AVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLR 256
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G + N + VL CA S +LGKQ+HG++ K CF +AL+ MY K G +
Sbjct: 257 SGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGT 316
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F + D++SW MI+GYA++G +AL F+ + G +PD +T VG+LSAC+H
Sbjct: 317 AVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAH 376
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
GLV+KG F+S+ +YG+ + HY C++DLL R+G + A+ ++ M +P+ W
Sbjct: 377 AGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWA 436
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
+LLG CR++ LA AAE +FE+EPEN YV L+N+YA+ G + +V R M +G
Sbjct: 437 SLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKG 496
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
+ K+ SW+EV ++H F VGD LHP+ +++YA L++L K++++G+V T VLHDV
Sbjct: 497 ITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVE 556
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
+E+K+ + YHSE+LAVA+GI++ P G PI+V KNLR+C DCH IK ISKIV R II+R
Sbjct: 557 DEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVR 616
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D+NRFHHF GSCSC DYW
Sbjct: 617 DSNRFHHFKNGSCSCRDYW 635
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 179/429 (41%), Gaps = 83/429 (19%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----------------- 121
SA +F+ MPRR S++A++S + +GQ A ++ +M +
Sbjct: 111 SARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALA 170
Query: 122 -------------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
D V W+ + Y + + AR++F+ MP RDVVS
Sbjct: 171 AATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVS 230
Query: 157 WNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQ----------NGRIE 202
W M+ Y R+F RML + NE ++ G+L A + +GR+
Sbjct: 231 WTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMT 290
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
+S+A + ++L+ + K +G A +F MP D VSW MI+GYAQN
Sbjct: 291 ------KSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQ 344
Query: 263 LAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA---- 314
EA R F+ D T+ ++S G VD+ IF ++ ++ + A
Sbjct: 345 PDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYA 404
Query: 315 -MIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHAR----NLFDRMPQ 368
+I ++ + A E+ M+ K N W +++ G + AR LF+ P+
Sbjct: 405 CVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPE 464
Query: 369 HDCISWAAIIAGYAQSGYSE--DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ ++ + YA G + ++ R +E+K + + P +S + + +G
Sbjct: 465 NPA-TYVTLANIYASVGLFDEVENTRRIMELK----GITKMPASSWIEVGTRMHVFLVGD 519
Query: 427 QLHGQLVKV 435
+LH Q +V
Sbjct: 520 KLHPQAEQV 528
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 54/292 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY--------------- 102
D D W+ + + G D A VF+ MP R VS+ AM+ Y
Sbjct: 194 DADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVR 253
Query: 103 LLNGQLDP--------------------ARQVFDQMPQR----DLVSWNVMISGYVRNKS 138
+L + P +QV +M + + + ++ Y +
Sbjct: 254 MLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGD 313
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA 194
+ A +F MPK D+VSW M+SGYAQNG D A R FD +L + +++ G+L+A
Sbjct: 314 MGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSA 373
Query: 195 YVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G +++ +F S + + + ++ + A+ + + M V+ ++
Sbjct: 374 CAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKF 433
Query: 249 SWNTMITG--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
W +++ G +N LA A+ LFE P ++ T+ + + Y G DE
Sbjct: 434 LWASLLGGCRIHKNVRLARWAAEALFEIEP-ENPATYVTLANIYASVGLFDE 484
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/625 (37%), Positives = 359/625 (57%), Gaps = 29/625 (4%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
++ YA G + R IFD + +KN + +N ++ +YV N +A ++F++ A +
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
+ +K + W V ++ + G N VF
Sbjct: 1126 HYTYPCVLKASSGSEDLW------VGMQIHAAVVRVGLDLN-----------------VF 1162
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC-- 337
++S Y + G + EA + D MP ++ VSWN+++AG + + D A E+ + M
Sbjct: 1163 VGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG 1222
Query: 338 --KNVASWNTMITGYAQS--GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ + +++ + ++ + +F ++ +SW +IA Y + +++ +
Sbjct: 1223 LKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDI 1282
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F++M+ + + SVL C +L++L LG+++H +V+ + + NAL+ MY K
Sbjct: 1283 FLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAK 1342
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG +E A F+++ +DV+SW +MI+ Y +G G+DA+ LF M+ +G+ PD I V +
Sbjct: 1343 CGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSV 1402
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
LSACSH GL+++G YF M + ++P +H+ CMVDLLGRAG++DEA +K MP EP
Sbjct: 1403 LSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEP 1462
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+ WGALL ACR+Y + AA+ +F++ PE +G YVLLSN+YA +GRW DV+ VR
Sbjct: 1463 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRS 1522
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M+ +G+KK+ G S E+ N+VHTF GD HP+ +IY L+ L K+K+ G+V T
Sbjct: 1523 IMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDS 1582
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
LHDV EE+KE L HSEKLA+A+ IL+ G PIR+ KNLRVC DCH A K ISKIVG
Sbjct: 1583 ALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVG 1642
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R I +RD NRFHHF G CSCGDYW
Sbjct: 1643 REITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 193/416 (46%), Gaps = 44/416 (10%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR 135
C D LH S+ + ++ Y + G+ R +FD++P++++V +NVMI YV
Sbjct: 1051 CIDHDLHSNPSLGIK-------LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103
Query: 136 NKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYAD---------AARRIFDRMLE 182
N S A +F+ M D ++ +L A +G D A R+ L+
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLK--ASSGSEDLWVGMQIHAAVVRV---GLD 1158
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
N NGL++ Y + G + EAC + + +VVSWNSL+ G + + DA + M
Sbjct: 1159 LNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 1218
Query: 243 PV----RDEVSWNTMITGYAQN--NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+ D + +++ + ++ + +F + K + +W M++ Y+ N E
Sbjct: 1219 ELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAE 1278
Query: 297 ARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMIT 348
A IF D + + +S +++ + + R + E + K N+ N +I
Sbjct: 1279 AVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALID 1338
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
YA+ G + +AR +FD+M D +SW ++I+ Y +G D++ LF M+ G +
Sbjct: 1339 MYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIA 1398
Query: 409 FTSVLSTCANLASLELGK---QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
F SVLS C++ L+ G+ +L + K+ FV ++ + + G V+EAY
Sbjct: 1399 FVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLLGRAGQVDEAY 1452
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 186/445 (41%), Gaps = 42/445 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ N I+ + + GC A V + MP R VS+N++++G NGQ D A +V +
Sbjct: 1158 DLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 1217
Query: 118 MP----QRDLVSWNVMISGYVRN--KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
M + D + ++ ++S + +F + + +VSWN M++ Y N
Sbjct: 1218 MELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPA 1277
Query: 172 AARRIF----DRMLEKNEISWN------GLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
A IF D ++ + IS G L+A + RI E + + N ++ N+
Sbjct: 1278 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN--LLLENA 1335
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KD 277
L+ + K L A+ +FD+M RD VSW +MI+ Y N +A LF D
Sbjct: 1336 LIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPD 1395
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELF 332
+ +++S G +DE R F M E+ + + M+ + ++D A
Sbjct: 1396 SIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFI 1455
Query: 333 EAMTCK-NVASWNTMITGYAQSGE----ITHARNLFDRMPQHDCISWAAIIAG-YAQSGY 386
+ M + N W +++ + A LF P+ + +++ YA++G
Sbjct: 1456 KQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQS--GYYVLLSNIYAKAGR 1513
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
ED + MK G + + P S + + G Q H Q ++ E VG
Sbjct: 1514 WEDVTTVRSIMKTKG--IKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKM 1571
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKD 471
+ G V E A ++ ++D
Sbjct: 1572 K-----EAGYVPETDSALHDVEEED 1591
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/541 (43%), Positives = 331/541 (61%), Gaps = 9/541 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D V ++ Y + L+ A+ LF+ P ++F W ++ GY NG + A ++ M
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 306 EKNTV----SWNAMIAGYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSGEIT 357
+ V ++ ++ ++ RE+ E + K+V +I YA+ G +
Sbjct: 169 DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVG 228
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR +FD++ D + W +++A Y+Q+G+ + L L EM G R + + +S A
Sbjct: 229 SAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASA 288
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ A+L G++LHG + FE+ V AL+ MY KCGSV A + FE + K V+SWN
Sbjct: 289 DNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNA 348
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI GYA HG +AL LFE M V KPD IT VG+LSACSH GL+E+G +F +M RDY
Sbjct: 349 MITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 407
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ P +HYTCMVDLLG +GRLDEA NL+ M PD+ WGALL +C+++ EL E A
Sbjct: 408 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIA 467
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
E + E+EP++AG YV+LSN+YA +G+W V+K+R M DR +KK SW+EV+NKVH
Sbjct: 468 LERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHA 527
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F GDT HP D IY+ LE + +K+ G+ ST V HDV ++EK +M+ HSE+LA+A
Sbjct: 528 FLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIA 587
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G++S P G + + KNLR+CEDCH AIK ISKI R I +RD NR+HHF G CSCGDY
Sbjct: 588 FGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDY 647
Query: 778 W 778
W
Sbjct: 648 W 648
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 37/360 (10%)
Query: 70 THMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVS 125
TH++ S H ++ + +Y +++ + + P +Q+ Q+ D V
Sbjct: 53 THLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVI 112
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI----FDRML 181
+++ Y SLS+AR LF+ +PK ++ WN ++ GYA NG +AA ++ FD L
Sbjct: 113 ATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGL 172
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFES--KANWE--VVSWNSLMGGFVKQKRLGDAKW 237
+ ++ +L A IE + E + WE V +L+ + K +G A+
Sbjct: 173 VPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSARE 232
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGK 293
+FD++ VRD V WN+M+ Y+QN + L E + + T +S N
Sbjct: 233 VFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAA 292
Query: 294 VDEARMIFDAMPEKNTVSW-----------NAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
+ + R E + +SW A++ Y + + +AR LFE + K V S
Sbjct: 293 LPQGR-------ELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVS 345
Query: 343 WNTMITGYAQSGEITHARNLFD---RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
WN MITGYA G T A +LF+ R+ + D I++ +++ + G E+ F M R
Sbjct: 346 WNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIR 405
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 169/396 (42%), Gaps = 68/396 (17%)
Query: 64 WNVAITTHMRNGCC-----DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
++ I T + N C SA +F+ +P+ + +N +I GY NG + A Q++ QM
Sbjct: 108 FDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQM 167
Query: 119 PQRDLVSWNVMISGYVRN-KSLSA---ARNLFEMMPK----RDVVSWNTMLSGYAQNGYA 170
LV N ++ +LSA R + E + + +DV ++ YA+ G
Sbjct: 168 FDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCV 227
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNG-----------------RIEEACMLFESKAN 213
+AR +FD++L ++ + WN +LAAY QNG R EA ++ A+
Sbjct: 228 GSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISAS 287
Query: 214 WE-----------VVSW-----------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
+ +SW +L+ + K + A+ +F+R+ V+ VSWN
Sbjct: 288 ADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWN 347
Query: 252 TMITGYAQNNYLAEAQRLFEE---APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
MITGYA + + EA LFEE D T+ ++S G ++E M F+ M
Sbjct: 348 AMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 407
Query: 309 TVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTM-----ITGYAQSGEIT 357
+ + M+ + R+D A L M + W + I + GEI
Sbjct: 408 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIA 467
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
R L + P D ++ + YAQ+G E +L
Sbjct: 468 LER-LIELEPD-DAGNYVILSNIYAQAGKWEGVAKL 501
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S + S+L +C +++ GKQLH Q+ GF + L+ +YC C S+ A F+
Sbjct: 76 SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I ++ WN +I GYA +G + A+ L+ M G+ PD+ T +L AC+ +E G
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
E + G + ++D+ + G + A+ + + DA W ++L A
Sbjct: 196 RE-IHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLWNSMLAAYS 253
Query: 587 LYGKTE--LAEKAAEVIFEMEPENAGMYVLLS 616
G + L+ + V+ + P A + +S
Sbjct: 254 QNGHPDACLSLCSEMVLTGLRPTEATLVTAIS 285
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/740 (34%), Positives = 400/740 (54%), Gaps = 91/740 (12%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+++V +I+ YV + +S +R+ F+ + K+++ SWN+++S Y + G A +++
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 181 --------LEKNEISWNGLLAAYVQ--NGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
L + ++ +L A V +G+ + C +F+ +V SL+ + +
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLVDGK-KVHCCVFKMGFEDDVFVAASLVHLYSRYG 170
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEA------------P 274
L A +F MPV+D SWN MI+G+ QN A A R+ E P
Sbjct: 171 VLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILP 230
Query: 275 V-----------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
V DVF A+++ Y + G++ +A+M+FD M ++ VS
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS 290
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTC---------------------------------- 337
WN++IA Y Q A F+ M
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350
Query: 338 ------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
K+V N ++ YA+ G + A +FD++P+ D ISW ++ GY Q+G + +++
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410
Query: 392 RLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
+ M+ + + N+ + S++ +++ +L+ G ++H +L+K FV L+ +
Sbjct: 411 DAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDL 470
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG +E+A F EI + WN +IA HG G++AL LF+ M +K D IT
Sbjct: 471 YGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITF 530
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
V +LSACSH+GLV++G + F M ++YG+ P+ KHY CMVDLLGRAG L++A L++NMP
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
+PDA+ WGALL AC++YG EL A++ + E++ EN G YVLLSN+YA + +W V K
Sbjct: 591 IQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
VR RDRG++K G+S + V +K F G+ HP+ IY L+ L K+K G+V
Sbjct: 651 VRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPD 710
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
V D+ E+EKE +L HSE+LA+A+GI+S P PIR+ KNLRVC DCHNA K+IS+
Sbjct: 711 YSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISR 770
Query: 751 IVGRLIILRDNNRFHHFSGG 770
I R I++RD+NRFHHF G
Sbjct: 771 ISEREIVVRDSNRFHHFKDG 790
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 194/463 (41%), Gaps = 100/463 (21%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP------------- 119
R G D A VF MP + S+NAMISG+ NG A V ++M
Sbjct: 168 RYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVAS 227
Query: 120 --------------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
D+ N +I+ Y + L A+ +F+ M RD
Sbjct: 228 ILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRD 287
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ--NGRIEEACML 207
+VSWN++++ Y QN A R F M + + ++ L + + Q + RI + +
Sbjct: 288 LVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILG 347
Query: 208 FESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
F + W +VV N+L+ + K + A +FD++P +D +SWNT++TGY QN +
Sbjct: 348 FVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLAS 407
Query: 265 EA----------------------------------------QRLFEEAPVKDVFTWTAM 284
EA +L + + DVF T +
Sbjct: 408 EAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCL 467
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV---- 340
+ Y + G++++A +F +P +V WNA+IA R + A +LF+ M + V
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADH 527
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFI 395
++ ++++ + SG + + FD M + I + ++ ++GY E + L
Sbjct: 528 ITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVR 587
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
M + + S + ++LS C + ELG +L++V E
Sbjct: 588 NMPI---QPDASIWGALLSACKIYGNAELGTLASDRLLEVDSE 627
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 154/369 (41%), Gaps = 64/369 (17%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N I + + G A VF+ M R VS+N++I+ Y N A + F
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313
Query: 118 MP----------------------------------------QRDLVSWNVMISGYVRNK 137
M +D+V N +++ Y +
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE-----KNEISWNGLL 192
++ A +F+ +P++D +SWNT+++GY QNG A A ++ M E N+ +W ++
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433
Query: 193 AAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
AY G +++ L ++ +V L+ + K RL DA +F +P V
Sbjct: 434 PAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSV 493
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
WN +I + EA +LF++ + D T+ +++S +G VDE + FD M
Sbjct: 494 PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIM 553
Query: 305 PEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMIT-----GYAQS 353
++ + + M+ + ++ A EL M + AS W +++ G A+
Sbjct: 554 QKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAEL 613
Query: 354 GEITHARNL 362
G + R L
Sbjct: 614 GTLASDRLL 622
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 135/317 (42%), Gaps = 25/317 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + G + A VF+ +PR+ ++S+N +++GY NG A ++
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415
Query: 118 MPQ-RDLV----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNG 168
M + RD + +W +I Y +L + + K DV ++ Y + G
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCG 475
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMG 224
+ A +F + + WN ++A+ +GR EEA LF+ + + +++ SL+
Sbjct: 476 RLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLS 535
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DV 278
+ + + FD M + + M+ + YL +A L P++ D
Sbjct: 536 ACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNT--VSWNAMIAG-YVQTKRMD---MARELF 332
W A++S G + + D + E ++ V + +++ Y T++ + R L
Sbjct: 596 SIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLA 655
Query: 333 EAMTCKNVASWNTMITG 349
+ W++++ G
Sbjct: 656 RDRGLRKTPGWSSVVVG 672
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F ++ ++C N+ + K+LH L+ G + L+ +Y G + + F+ I
Sbjct: 25 FNALFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 469 DKDVISWNTMIAGYARHGFGKDAL----MLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
K++ SWN++I+ Y R G +A+ LF ++PD T IL AC +
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGK 141
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL-G 583
K + M + V + +V L R G LD A + +MP + D +W A++ G
Sbjct: 142 KVHCCVFKMGFEDDVFVAAS----LVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISG 196
Query: 584 ACR 586
C+
Sbjct: 197 FCQ 199
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/571 (39%), Positives = 350/571 (61%), Gaps = 13/571 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPV 275
+L+ + K L DA +FD +P +D V+W T+++ +N +A + E
Sbjct: 47 KTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQ 106
Query: 276 KDVFTWTAMV-------SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
D F +++++ S +V+ GK AR + E + V ++++ Y + + D
Sbjct: 107 PDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVK-SSLVDMYAKFELPDYG 165
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
R +F+++ + SW MI+GYA+SG A LF P + +W A+I+G QSG +
Sbjct: 166 RAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNAN 225
Query: 389 DSLRLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
D+L LF+EM+R G + + +SV+ CAN A ELGKQ+H ++ +G+E+ F+ NAL
Sbjct: 226 DALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNAL 285
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KC V A + F E+ KDV+SW ++I G A+HG ++AL L++ M G+KP++
Sbjct: 286 VDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNE 345
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T VG++ ACSH GLV KG F SM D+G+ P+ +HYTC++DL R+G LDEA+NL++
Sbjct: 346 VTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIR 405
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP +PD TW ALL AC+ +G T++A + A+ + +++PE+ Y+LLSN+YA +G W +
Sbjct: 406 TMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWEN 465
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
VS VR M + VKKV GYS +++ + F G+ P KD I + +L+ ++++ G+
Sbjct: 466 VSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGY 525
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V T VL D+ ++EKE L +HSE+LA+AYG+L G IR++KNLRVC DCH +K
Sbjct: 526 VPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVLKL 585
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS I R I +RD R+HHF G CSC D+W
Sbjct: 586 ISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 197/409 (48%), Gaps = 25/409 (6%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI----FDRMLEKN 184
+I Y + L A LF+ +P++D V+W T+LS + A I L+ +
Sbjct: 49 LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPD 108
Query: 185 EISWNGLLAA-------YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
++ L+ A +V+ G+ A L +VV +SL+ + K + +
Sbjct: 109 HFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVK-SSLVDMYAKFELPDYGRA 167
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+FD + +SW MI+GYA++ EA LF E+P K+++ WTA++SG VQ+G ++A
Sbjct: 168 VFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDA 227
Query: 298 RMIFDAM-PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW--------NTMIT 348
+F M E +++ +++ V REL + + C + N ++
Sbjct: 228 LYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVD 287
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
YA+ ++ A+ +F M + D +SW +II G AQ G +E++L L+ +M G + N
Sbjct: 288 MYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVT 347
Query: 409 FTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F ++ C+++ + G+ L +V+ G LL ++ + G ++EA + +
Sbjct: 348 FVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTM 407
Query: 468 -VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
V D +W +++ HG K A+ + + + + +KP+D + +LS
Sbjct: 408 PVKPDEPTWAALLSACKHHGNTKMAVRIADHL--LDLKPEDPSSYILLS 454
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 163/391 (41%), Gaps = 95/391 (24%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG----------------------- 132
+I Y G L A ++FD +PQ+D V+W ++S
Sbjct: 47 KTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQ 106
Query: 133 ---YVRNKSLSAARNL--------------FEMMP--KRDVVSWNTMLSGYAQNGYADAA 173
+V + + A NL F + P + DVV ++++ YA+ D
Sbjct: 107 PDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVK-SSLVDMYAKFELPDYG 165
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
R +FD + E + ISW +++ Y ++GR EA LF + +W +L+ G V+
Sbjct: 166 RAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNAN 225
Query: 234 DAKWIFDRMPVRDEVSW-----------------------------------------NT 252
DA ++F M R+ VS N
Sbjct: 226 DALYLFVEMR-REGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNA 284
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKN 308
++ YA+ + + A+ +F E KDV +WT+++ G Q+G +EA ++D M + N
Sbjct: 285 LVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPN 344
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLF 363
V++ +I + R LF++M ++ + ++ +++SG + A NL
Sbjct: 345 EVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLI 404
Query: 364 DRMP-QHDCISWAAIIAGYAQSGYSEDSLRL 393
MP + D +WAA+++ G ++ ++R+
Sbjct: 405 RTMPVKPDEPTWAALLSACKHHGNTKMAVRI 435
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 52/257 (20%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W I+ + R+G AL +F P ++ ++ A+ISG + +G + A +F +M +R+
Sbjct: 180 WTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEM-RREG 238
Query: 124 VSW-----------------------------------------NVMISGYVRNKSLSAA 142
VS N ++ Y + + AA
Sbjct: 239 VSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAA 298
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQN 198
+ +F M ++DVVSW +++ G AQ+G A+ A ++D M ++ NE+++ GL+ A
Sbjct: 299 KYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHV 358
Query: 199 GRIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNT 252
G + + LF+S + + L+ F + L +A+ + MPV+ DE +W
Sbjct: 359 GLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAA 418
Query: 253 MITGYAQNNYLAEAQRL 269
+++ + A R+
Sbjct: 419 LLSACKHHGNTKMAVRI 435
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 15/223 (6%)
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
+ K+LH Q++K G L+ Y KCG +++A F+ + +D ++W T+++
Sbjct: 26 IAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACN 85
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV------EKGTEYFYSMNRDY 537
A + + G++PD ++ AC++ G V + + S +
Sbjct: 86 LSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFED 145
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
V+ +S +VD+ + D + + ++ FE + +W A++ Y ++ +A
Sbjct: 146 DVVKSS-----LVDMYAKFELPDYGRAVFDSI-FELSSISWTAMISG---YARSGRKLEA 196
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
E+ E +N + L + SG D + ++MR GV
Sbjct: 197 LELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGV 239
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/701 (34%), Positives = 391/701 (55%), Gaps = 36/701 (5%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
N ++ Y G+L Q+F++M RD++SWN MIS YV A +LF+ M
Sbjct: 172 NNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVL 231
Query: 153 -DVVSWNTMLSGYAQNGYADAARR----IFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
D ++ +++S A+ + +R I D L N L+ Y + G+++EA L
Sbjct: 232 PDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGL 291
Query: 208 FE--SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
++ +VV W +L+ G+VK ++ A+ +FD+M R VSW TM++GY Q Y E
Sbjct: 292 LSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCE 351
Query: 266 AQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIA 317
+ LF+ E + D ++S V D R + + + NA++
Sbjct: 352 SLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLD 411
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + ++D A FE + CK+ ASWN+M+ G+ +SG + AR+ F+++P+ D +SW +
Sbjct: 412 LYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTM 471
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+ Y + +S +F +M+ + +++ S+LS+CA + +L G ++ + K
Sbjct: 472 VNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEI 531
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+G AL+ MY KCG VE AY F +I++K+V W M+A YA G +A+ L+
Sbjct: 532 GIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLE 591
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ G+KPD +T + +L+ACSH GLV++G +YF + Y +IP HY CMVDLLGR G
Sbjct: 592 MEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVG 651
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
L+E ++ MP EPD + W +L+ ACR + ELAE+A + + E++P N G +VLLSN
Sbjct: 652 HLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSN 711
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
+YA +GRW DVSKVR K+ + GV K G++ +E VH F + + + I L++
Sbjct: 712 IYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNLVSAD---ILCMLQD 768
Query: 678 LEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRV 737
+E +L LV ++ + + HSE+LAVA+G+++ PIRV+ ++R+
Sbjct: 769 IERRL----------LVKQELSDTTSQ-----HSERLAVAFGLINNQENSPIRVVNSVRM 813
Query: 738 CEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
C DCH+ +K IS+ R I++RDN RFH F+ G CSC DYW
Sbjct: 814 CRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 214/499 (42%), Gaps = 100/499 (20%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQR----DLVS------ 125
+F M R +S+N MIS Y+L G A +FD+M P LVS
Sbjct: 189 QLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLK 248
Query: 126 -----------------W------NVMISGYVRNKSLSAARNLFEMMPKR--DVVSWNTM 160
W N ++ Y + + A L + DVV W T+
Sbjct: 249 DLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTL 308
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV---- 216
+SGY ++ D AR++FD+M E++ +SW +++ YVQ G E+ LF+ V
Sbjct: 309 VSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDE 368
Query: 217 VSWNSLMGGFVKQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
V+ +++ V + + +I + D N ++ YA+ L EA R FE+
Sbjct: 369 VALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQ 428
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
P K +W +M+ G+ ++G VD+AR F+ +PEK+ VSWN M+ YV+ + + E+F
Sbjct: 429 LPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIF 488
Query: 333 EAM-----------------TCKNVASWN----------------------TMITGYAQS 353
M +C V + N +I Y +
Sbjct: 489 CKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKC 548
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + A +F ++ + + W A++A YA G + +++ L++EM+ G + + F ++L
Sbjct: 549 GCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALL 608
Query: 414 STCANLASLELGKQLHGQL------VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
+ C++ ++ G + +L + GC V + + G +EE E +
Sbjct: 609 AACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVD-----LLGRVGHLEETVKFIERM 663
Query: 468 -VDKDVISWNTMIAGYARH 485
++ DV W++++ H
Sbjct: 664 PIEPDVSIWSSLMRACRSH 682
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 190/397 (47%), Gaps = 55/397 (13%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V + ++SGY+ + ++D ARQ+FD+M +R LVSW M+SGYV+ + LF+ M
Sbjct: 303 VLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFE 362
Query: 153 DV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEA 204
+V V+ T+LS D R + ++ + N LL Y + G+++EA
Sbjct: 363 NVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEA 422
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
FE SWNS++ GF + + A+ F+++P +D VSWNTM+ Y +++
Sbjct: 423 LRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFN 482
Query: 265 EAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG-- 318
E+ +F + + VK D T +++S + G ++ + + EKN + +AM+
Sbjct: 483 ESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWV-NVYIEKNEIGIDAMLGTAL 541
Query: 319 ---YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DC 371
Y + ++MA E+F + KNV W M+ YA G+ A +L+ M + D
Sbjct: 542 IDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDH 601
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMK-----------------------------RYGE 402
+++ A++A + G ++ + F +++ ++ E
Sbjct: 602 VTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIE 661
Query: 403 RLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
R+ P ++S++ C + ++EL +Q QL+++
Sbjct: 662 RMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEI 698
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 171/360 (47%), Gaps = 42/360 (11%)
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N + N ++ Y++ G++ LF++M D ISW +I+ Y G ++L LF EM
Sbjct: 166 RNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEM 225
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
G + S++STCA L LE+GK+LH +V + N L+ MY KCG +
Sbjct: 226 LVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKM 285
Query: 458 EEAY---------------------------------HAFEEIVDKDVISWNTMIAGYAR 484
+EA+ F+++ ++ ++SW TM++GY +
Sbjct: 286 DEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQ 345
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
G+ ++L LF+ M+ + PD++ +V +LSAC H + G ++ YG++ +
Sbjct: 346 GGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRS-VHAFIVTYGMLVDGF 404
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL-GACRLYGKTELAEKAAEVIFE 603
++DL + G+LDEA + +P + AA+W ++L G CR G +KA + +
Sbjct: 405 LGNALLDLYAKCGKLDEALRTFEQLPCK-SAASWNSMLDGFCRSGG----VDKARDFFNK 459
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVG 661
+ ++ + + N Y + + ++ KM+ VK K T S L KV + G
Sbjct: 460 IPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHG 519
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 146/298 (48%), Gaps = 9/298 (3%)
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
I W ++ + G ++ L + M G L+ S F ++ C ++LG ++HG+
Sbjct: 99 IIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGR 158
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
++K GF + N L+ +Y KCG ++E FE++ +DVISWNTMI+ Y G ++A
Sbjct: 159 ILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREA 218
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMV 550
L LF+ M G+ PD+ITMV ++S C+ +E G + Y ++ + C+V
Sbjct: 219 LDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWI--RGSLLNCLV 276
Query: 551 DLLGRAGRLDEAQNLMKNM-PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
D+ + G++DEA L+ E D W L+ Y K+ +KA ++ +M +
Sbjct: 277 DMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSG---YVKSNKIDKARQLFDKMNERSL 333
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGV--KKVTGYSWLEVQNKVHTFSVGDTLH 665
+ + + Y G + + ++ +MR V +V + L + F +G ++H
Sbjct: 334 VSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVH 391
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 163/377 (43%), Gaps = 59/377 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ W ++ ++++ D A +F+ M RS VS+ M+SGY+ G + ++F QM
Sbjct: 301 DVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMR 360
Query: 120 QRD------------------------------LVSWNVMISGYVRNK---------SLS 140
+ +V++ +++ G++ N L
Sbjct: 361 FENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLD 420
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
A FE +P + SWN+ML G+ ++G D AR F+++ EK+ +SWN ++ AYV++
Sbjct: 421 EALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDL 480
Query: 201 IEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM--- 253
E+ C + S + + SL+ K L W+ + ++E+ + M
Sbjct: 481 FNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWV-NVYIEKNEIGIDAMLGT 539
Query: 254 --ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-- 309
I Y + + A +F + K+VF WTAM++ Y G+ EA ++ M E+
Sbjct: 540 ALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKP 599
Query: 310 --VSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNL 362
V++ A++A +D + F + + + M+ + G +
Sbjct: 600 DHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKF 659
Query: 363 FDRMP-QHDCISWAAII 378
+RMP + D W++++
Sbjct: 660 IERMPIEPDVSIWSSLM 676
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 138/290 (47%), Gaps = 20/290 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + G D AL F +P +S+ S+N+M+ G+ +G +D AR F+++P++D+V
Sbjct: 407 NALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIV 466
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
SWN M++ YV++ + + +F M K D + ++LS A+ G + + +
Sbjct: 467 SWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWV-NVY 525
Query: 181 LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+EKNEI + +L Y + G +E A +F V W ++M + + + +A
Sbjct: 526 IEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEA 585
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEA-----PVKDVFTWTAMVS 286
++ M R D V++ ++ + + E + F + + + + MV
Sbjct: 586 IDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVD 645
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDMARELFEAM 335
+ G ++E + MP + VS W++++ +++A + F+ +
Sbjct: 646 LLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQL 695
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 269/815 (33%), Positives = 427/815 (52%), Gaps = 98/815 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN---GQLDPA----- 111
++ WN I +NG AL + + R S VS + ++ G D
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 112 -RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
Q+ D + DL N ++ Y R L+ AR +F+ MP RD+VSWN+++SGY+ +GY
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 171 DAARRIFDRM----LEKNEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNS 221
+ A I+ + + + + + +L A+ V+ G+ L +S N VV N
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL-KSGVNSVVVVNNG 247
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---DV 278
L+ ++K +R DA+ +FD M VRD VS+NTMI GY + + E+ R+F E + D+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL 307
Query: 279 FTWTA-----------------------------------MVSGYVQNGKVDEARMIFDA 303
T ++ ++ Y + G + AR +F++
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------------------------- 335
M K+TVSWN++I+GY+Q+ + A +LF+ M
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 336 -----------TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
C +++ N +I YA+ GE+ + +F M D ++W +I+ +
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G L++ +M++ + + F L CA+LA+ LGK++H L++ G+E+ +G
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NAL+ MY KCG +E + FE + +DV++W MI Y +G G+ AL F M+ GI
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD + + I+ ACSH+GLV++G F M Y + P +HY C+VDLL R+ ++ +A+
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
++ MP +PDA+ W ++L ACR G E AE+ + I E+ P++ G +L SN YAA +
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRK 727
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W VS +R ++D+ + K GYSW+EV VH FS GD P+ + IY LE L + +
Sbjct: 728 WDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAK 787
Query: 685 DGFVYSTKLVLHDV-GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+G++ + V ++ EEEK ++ HSE+LA+A+G+L+ G P++VMKNLRVC DCH
Sbjct: 788 EGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHE 847
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKIVGR I++RD NRFH F G+CSC D W
Sbjct: 848 VTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/585 (23%), Positives = 262/585 (44%), Gaps = 99/585 (16%)
Query: 129 MISGYVRNKSLSAARNLFE-MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK---- 183
+I Y + +++ ++F + P ++V WN+++ +++NG A + ++ E
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIF 239
++ ++ ++ A E +++E + ++ N+L+ + + L A+ +F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTA------------ 283
D MPVRD VSWN++I+GY+ + Y EA ++ E V D FT ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 284 -----------------------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
+V+ Y++ + +AR +FD M +++VS+N MI GY+
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 321 QTKRMDMARELF---------EAMTCKNV-----------------------------AS 342
+ + ++ + +F + +T +V
Sbjct: 285 KLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV 344
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N +I YA+ G++ AR++F+ M D +SW +II+GY QSG ++++LF M E
Sbjct: 345 RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ + + ++S LA L+ GK LH +K G V NAL+ MY KCG V ++
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F + D ++WNT+I+ R G L + M+ + PD T + L C+
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 524
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
G E + R +G + ++++ + G L+ + + + M D TW ++
Sbjct: 525 KRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMI 582
Query: 583 GACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLSNLYAAS 622
A +YG+ EKA E +ME P++ V ++ +YA S
Sbjct: 583 YAYGMYGE---GEKALETFADMEKSGIVPDSV---VFIAIIYACS 621
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 187/386 (48%), Gaps = 16/386 (4%)
Query: 253 MITGYAQNNYLAEAQRLFEE-APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------P 305
+I Y+ A + +F +P K+V+ W +++ + +NG EA + + P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 306 EKNTV-SWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLF 363
+K T S AG + D+ E M + ++ N ++ Y++ G +T AR +F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
D MP D +SW ++I+GY+ GY E++L ++ E+K + +SVL NL ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G+ LHG +K G + V N L+ MY K +A F+E+ +D +S+NTMI GY
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 484 RHGFGKDAL-MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+ ++++ M E++ KPD +T+ +L AC H + +Y Y+ G +
Sbjct: 285 KLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLA-KYIYNYMLKAGFVLE 341
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
S ++D+ + G + A+++ +M + D +W +++ G A K +++
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDV 628
ME + + L+ L + S R D+
Sbjct: 401 IMEEQADHITYLM--LISVSTRLADL 424
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 147/285 (51%), Gaps = 6/285 (2%)
Query: 346 MITGYAQSGEITHARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+I Y+ E + ++F R+ P + W +II ++++G ++L + +++
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
++ F SV+ CA L E+G ++ Q++ +GFE+ FVGNAL+ MY + G + A F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+E+ +D++SWN++I+GY+ HG+ ++AL ++ +K I PD T+ +L A + +V+
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + + GV +V + + R +A+ + M D+ ++ ++
Sbjct: 225 QG-QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR-DSVSYNTMICG 282
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
Y K E+ E++ + E + + +S++ A G D+S
Sbjct: 283 ---YLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLS 324
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/699 (35%), Positives = 395/699 (56%), Gaps = 50/699 (7%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNV 66
+R + + ++++H + + A +N P + + L + + + I Q N
Sbjct: 3 MRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTA-------IFQCNS 55
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
I+ H RNG A +F M RS VS+ AMIS Y NG++ A QVFD+MP R S+
Sbjct: 56 QISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 127 NVMISGYVRNK-SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-- 183
N MI+ ++NK L A LF +P+++ VS+ TM++G+ + G D A ++ K
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFR 175
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ ++ N LL+ Y++ G+ EA +F+ A EVVS +S++ G+ K R+ DA+ +FDRM
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK----------------------- 276
R+ ++W MI GY + + + LF +E VK
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 277 -------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
D+F +++S Y + G + EA+ +F M K++VSWN++I G VQ K
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
++ A ELFE M K++ SW MI G++ GEI+ LF MP+ D I+W A+I+ +
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVS 415
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+GY E++L F +M + N F+SVLS A+LA L G Q+HG++VK+ V
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
N+L+ MYCKCG+ +AY F I + +++S+NTMI+GY+ +GFGK AL LF +++ G
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ +T + +LSAC H G V+ G +YF SM Y + P HY CMVDLLGR+G LD+A
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
NL+ MP +P + WG+LL A + + + +LAE AA+ + E+EP++A YV+LS LY+ G
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+ D ++ + + +KK G SW+ ++ +VH F GD
Sbjct: 656 KNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGD 694
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 342/539 (63%), Gaps = 15/539 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG------KVDEARMIFDAM 304
N +I Y+++ +++R FE++P K TW++++S + QN + M
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLR 113
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHA 359
P+ + + G + R D+ + + ++ K +V ++++ YA+ GEI +A
Sbjct: 114 PDDHVLPSATKSCGILS--RCDIGKSV-HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R +FD MP + ++W+ ++ GYAQ G +E++L LF E +N F++V+S CAN
Sbjct: 171 RKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANS 230
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
LELG+Q+ G +K F++ FVG++L+ +Y KCG +E AY F+E+ +++ WN M+
Sbjct: 231 TLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAML 290
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
A+H + + LF+ MK G+KP+ IT + +L+ACSH GLV++G +Y++ + ++ +
Sbjct: 291 KACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG-KYYFDLMKESRI 349
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P KHY +VD+LGRAG+L+EA ++ NMP +P + WGALL +C ++ TELA AA+
Sbjct: 350 EPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELAAFAAD 409
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+FE+ P ++GM++ LSN YAA GR+ D +K R +RDRG KK TG SW+E +NKVHTF+
Sbjct: 410 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 469
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
G+ H IY L EL ++++ G+V T VL +V +EK +RYHSE+LA+A+G
Sbjct: 470 AGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSERLAIAFG 529
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+++ PA RPIRVMKNLRVC DCHNAIK +S R+II+RDNNRFH F G CSC DYW
Sbjct: 530 LITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/503 (21%), Positives = 209/503 (41%), Gaps = 91/503 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ H N CD L S R S+ + GY++ L +P LV+ N
Sbjct: 10 VPCHNYNQICDLLL----SSARSRSIVKGLQLHGYIVKSGLS-------LIP---LVA-N 54
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
+I+ Y +++ +R FE P++ +W++++S +AQN + +M+ +
Sbjct: 55 NLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRP 114
Query: 188 WNGLLAAYVQNGRI--------EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
+ +L + ++ I C+ ++ + +V +SL+ + K + A+ +F
Sbjct: 115 DDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMF 174
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--------------------- 278
D MP+R+ V+W+ M+ GYAQ EA LF+EA +++
Sbjct: 175 DEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLE 234
Query: 279 ------------------FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
F +++VS Y + G ++ A +FD +P +N WNAM+
Sbjct: 235 LGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACA 294
Query: 321 QTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS--- 373
Q ELF+ M N ++ ++ + +G + + FD M +
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDK 354
Query: 374 -WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+A+++ ++G E++L + M S + ++L++C + EL ++
Sbjct: 355 HYASLVDMLGRAGKLEEALEIVTNMPI---DPTESVWGALLTSCTIHKNTELAAFAADKV 411
Query: 433 VKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV-----ISW-------NTMI 479
++G +G + +L Y G E+A A + + D+ +SW +T
Sbjct: 412 FELGPVSSGMHI--SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 469
Query: 480 AGYARHGFGKDALMLFESMKTVG 502
AG RH K+ ++E + +G
Sbjct: 470 AGERRHERSKE---IYEKLAELG 489
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 7/191 (3%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N + +L + A S+ G QLHG +VK G V N L+ Y K ++ AF
Sbjct: 14 NYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E+ K +W+++I+ +A++ +L M ++PDD + +C +
Sbjct: 74 EDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCD 133
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + ++ G + + +VD+ + G + A+ + MP + TW +
Sbjct: 134 IGKS-VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLR-NVVTWSGM--- 188
Query: 585 CRLYGKTELAE 595
+YG ++ E
Sbjct: 189 --MYGYAQMGE 197
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 62/343 (18%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA-- 111
K D D+ + + + + G A +F+ MP R+ V+++ M+ GY G+ + A
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALW 203
Query: 112 ---RQVFDQMPQRDLVSWNV----------------------------------MISGYV 134
+F+ + D V ++S Y
Sbjct: 204 LFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYS 263
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
+ L A +F+ +P R++ WN ML AQ+ + +F RM ++ N I++
Sbjct: 264 KCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLN 323
Query: 191 LLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
+L A G ++E F ES+ + SL+ + +L +A I MP+
Sbjct: 324 VLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDP 383
Query: 246 DEVSWNTMITGYA--QNNYLA--EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA---- 297
E W ++T +N LA A ++FE PV ++ + Y +G+ ++A
Sbjct: 384 TESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMH-ISLSNAYAADGRFEDAAKAR 442
Query: 298 RMIFDAMPEKNT-VSW----NAMIAGYVQTKRMDMARELFEAM 335
+++ D +K T +SW N + +R + ++E++E +
Sbjct: 443 KLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKL 485
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/540 (41%), Positives = 332/540 (61%), Gaps = 40/540 (7%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
VF T +V+ YV+ G +D+AR + D MPE++ VSW MI+GY QT+R A +LF M
Sbjct: 45 VFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLR 104
Query: 336 ---------------TC---------KNVASW-------------NTMITGYAQSGEITH 358
+C K V S ++++ YA+S I
Sbjct: 105 AGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQE 164
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
AR +FD +P+ D +S AII+GYAQ G E++L LF ++ G + N FT++++ +
Sbjct: 165 ARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSG 224
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
LASL+ GKQ+H +++ + N+L+ MY KCG + + F+ ++++ V+SWN M
Sbjct: 225 LASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAM 284
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ GY RHG G + + LF+ + +KPD +T++ +LS CSH GLV++G + F ++ ++
Sbjct: 285 LMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQS 343
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ ++ HY C++DLLGR+GRL++A NL++NMPFE + WG+LLGACR++ + E A
Sbjct: 344 ALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVA 403
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + EMEPENAG YV+LSN+YAA+G W DV KVR M ++ V K G SW+ + +HTF
Sbjct: 404 QKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTF 463
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
+ HP K I A ++E+ +K GFV VLHDV +E+KE ML HSEKLA+ +
Sbjct: 464 HSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITF 523
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G+++ P G IRVMKNLR+C DCHN K +SK+ R I LRD NRFH + G+C+CGDYW
Sbjct: 524 GLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 142/285 (49%), Gaps = 19/285 (6%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KN 184
+++ YVR +L ARN+ + MP+R VVSW TM+SGY+Q A +F +ML N
Sbjct: 51 LVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPN 110
Query: 185 EISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
E + +L + I + +L ++ + +SL+ + K + + +A+ +FD
Sbjct: 111 EYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFD 170
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+P RD VS +I+GYAQ EA ++L+ E + T+T +V+ +D
Sbjct: 171 TLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDY 230
Query: 297 ARMIFDAMPEKNTVSW----NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+ + + K + N++I Y + ++ +R +F+ M ++V SWN M+ GY +
Sbjct: 231 GKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR 290
Query: 353 SGEITHARNLFDRMPQH---DCISWAAIIAGYAQSGYSEDSLRLF 394
G +LF + + D ++ A+++G + G ++ L +F
Sbjct: 291 HGLGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIF 335
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 176/387 (45%), Gaps = 63/387 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--------- 118
+T ++R G D A +V + MP RS VS+ MISGY + A +F +M
Sbjct: 52 VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 111
Query: 119 ------------PQRD---------LVSWNV---------MISGYVRNKSLSAARNLFEM 148
PQ LV N ++ Y +++++ AR +F+
Sbjct: 112 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 171
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAA----RRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+P+RDVVS ++SGYAQ G + A R+++ ++ N +++ L+ A ++
Sbjct: 172 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYG 231
Query: 205 ----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++ + + V NSL+ + K +L ++ +FD M R VSWN M+ GY ++
Sbjct: 232 KQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRH 291
Query: 261 NYLAEAQRLFEE--APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-----NTVSW 312
E LF++ VK D T A++SG G VDE IFD + ++ +T +
Sbjct: 292 GLGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY 351
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTM-----ITGYAQSGEITHARNLFDRM 366
+I ++ R++ A L E M ++ S W ++ + GE+ A+ L +
Sbjct: 352 GCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELV-AQKLLEME 410
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRL 393
P+ + ++ + YA +G +D ++
Sbjct: 411 PE-NAGNYVILSNIYAAAGMWKDVFKV 436
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 196/402 (48%), Gaps = 34/402 (8%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV-- 155
+++ Y+ G LD AR V D+MP+R +VSW MISGY + + A +LF M + +
Sbjct: 51 LVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPN 110
Query: 156 --SWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----NGLLAAYVQNGRIEEACMLFE 209
+ T+L+ + +++ +++ N S + LL Y ++ I+EA +F+
Sbjct: 111 EYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFD 170
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMIT---GYAQNNY 262
+ +VVS +++ G+ ++ +A +F ++ + V++ T++T G A +Y
Sbjct: 171 TLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDY 230
Query: 263 LAEAQRLF--EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY- 319
+ L +E P V +++ Y + GK+ +R +FD M E++ VSWNAM+ GY
Sbjct: 231 GKQVHALILRKELPFF-VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYG 289
Query: 320 ---VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI---- 372
+ + + + ++L + + +V + +++G + G + ++FD + +
Sbjct: 290 RHGLGHEVISLFKDLHKEVKPDSV-TLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHT 348
Query: 373 -SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ II +SG E +L L M S + S+L C A++ +G+ + +
Sbjct: 349 GHYGCIIDLLGRSGRLEKALNLIENMPFES---TPSIWGSLLGACRVHANVHVGELVAQK 405
Query: 432 LVKVGFE-AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L+++ E AG +V L +Y G ++ + + +++K V
Sbjct: 406 LLEMEPENAGNYV--ILSNIYAAAGMWKDVFKVRKLMLEKTV 445
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 105/205 (51%), Gaps = 17/205 (8%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ + ++ C +L G+Q+H +++ + F+G L+ MY +CG++++A + + +
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++ V+SW TMI+GY++ +AL LF M G P++ T+ +L++CS G +
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCS-------GPQ 125
Query: 529 YFYSMNRDYGVIPNSKHYTCM------VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
Y + + ++ + + M +D+ ++ + EA+ + +P E D + A++
Sbjct: 126 SIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP-ERDVVSCTAII 184
Query: 583 GACRLYGKTELAEKAAEVIFEMEPE 607
Y + L E+A ++ ++ E
Sbjct: 185 SG---YAQKGLDEEALDLFRQLYSE 206
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/617 (37%), Positives = 359/617 (58%), Gaps = 44/617 (7%)
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C + ++N +S N + +Q+ L ++ D V + ++ A+N +
Sbjct: 22 CKILPRRSNTSSLSRNISVFASYEQEELSPGRYS-DEFNVVQASDFIEILQLCARNGAVM 80
Query: 265 EAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
EA+ + DV +++ Y + G V+ AR +FD M E++ VSWN MI Y
Sbjct: 81 EAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 140
Query: 321 QTKRMDMARELF--------------------------EAMTCK-------------NVA 341
+ + A ++F +A+ CK N+
Sbjct: 141 RNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLY 200
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
++ YA+ G I A +F+ M ++W++++AGY QS E++L L+ +R
Sbjct: 201 VGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMS 260
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
N+ +SV+ C+NLA+L GKQ+H + K GF + FV ++ + MY KCGS+ E+Y
Sbjct: 261 LEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESY 320
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F E+ +K++ WNT+I+G+A+H K+ ++LFE M+ G+ P+++T +LS C HTG
Sbjct: 321 IIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 380
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE+G +F M YG+ PN HY+CMVD+LGRAG L EA L+K++PFEP A+ WG+L
Sbjct: 381 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSL 440
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
L +CR+ ELAE AA+ +FE+EPENAG +VLLSN+YAA+ +W +++K R +RD VK
Sbjct: 441 LASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVK 500
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
KV G SW+++++KVH F VG++ HP I L+ L +L++ G+ S + LHDV
Sbjct: 501 KVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIG 560
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
+KE +L HSEKLA+ +G++ +P G +R+MKNLR+C DCH +K S R II+RD
Sbjct: 561 KKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDA 620
Query: 762 NRFHHFSGGSCSCGDYW 778
NRFHHFS G CSCG++W
Sbjct: 621 NRFHHFSDGHCSCGEFW 637
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 171/358 (47%), Gaps = 32/358 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
N +I+ Y G ++ ARQVFD M +R LVSWN MI Y RN+ S A ++F M K
Sbjct: 102 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFK 161
Query: 152 RDVVSWNTMLSGYAQNGYADAARRI----FDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
+ +++LS N A +++ L+ N LL Y + G I +A +
Sbjct: 162 FSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQV 221
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIF---DRMPV-RDEVSWNTMITGYAQNNYL 263
FES + V+W+S++ G+V+ K +A ++ RM + +++ + +++I + L
Sbjct: 222 FESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 281
Query: 264 AEAQRLFEEAPVK------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
E +++ A ++ +VF ++ V Y + G + E+ +IF + EKN WN +I+
Sbjct: 282 IEGKQM--HAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIIS 339
Query: 318 GYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQH---- 369
G+ + R LFE M N +++++++ +G + R F M
Sbjct: 340 GFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLS 399
Query: 370 -DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ + ++ ++ ++G ++ L +K S + S+L++C +LEL +
Sbjct: 400 PNVVHYSCMVDILGRAGLLSEAYEL---IKSIPFEPTASIWGSLLASCRVCKNLELAE 454
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 194/429 (45%), Gaps = 44/429 (10%)
Query: 87 MPRRS---SVSYNAMISGYLLNGQLDPAR--QVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
+PRRS S+S N + +L P R F+ + D + ++ RN ++
Sbjct: 25 LPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASDFIE---ILQLCARNGAVME 81
Query: 142 AR----NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
A+ M + DV N +++ Y++ G+ + AR++FD MLE++ +SWN ++ Y +
Sbjct: 82 AKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR--------MPVRDEVS 249
N EA +F WE+ + F L D + ++ +
Sbjct: 142 NRMESEALDIF-----WEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLD 196
Query: 250 WN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
N ++ YA+ + +A ++FE K TW++MV+GYVQ+ +EA +++
Sbjct: 197 LNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRA 256
Query: 305 P----EKNTVSWNAMI------AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
E+N + +++I A ++ K+M + ++ NV ++ + YA+ G
Sbjct: 257 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV--IRKSGFGSNVFVASSAVDMYAKCG 314
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ + +F + + + W II+G+A+ ++ + LF +M++ G N F+S+LS
Sbjct: 315 SLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 374
Query: 415 TCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
C + +E G++ + G + ++ + + G + EAY + I +
Sbjct: 375 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTA 434
Query: 474 S-WNTMIAG 481
S W +++A
Sbjct: 435 SIWGSLLAS 443
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 151/349 (43%), Gaps = 30/349 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ NV I + + G + A VF+ M RS VS+N MI Y N A +F +M
Sbjct: 97 DVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMR 156
Query: 120 QRDLVSWNVMISGYVR----NKSLSAARNL--FEMMPKRDVVSW--NTMLSGYAQNGYAD 171
IS + N + L M D+ + +L YA+ G +
Sbjct: 157 NEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMIN 216
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW----------EVVSWNS 221
A ++F+ M +K+ ++W+ ++A YVQ+ EEA +L+ V+ S
Sbjct: 217 DAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 276
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
+ ++ K++ I + ++ + YA+ L E+ +F E K++ W
Sbjct: 277 NLAALIEGKQMHAV--IRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELW 334
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
++SG+ ++ + E ++F+ M + N V+++++++ T ++ R F+ M
Sbjct: 335 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 394
Query: 338 K-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAG 380
NV ++ M+ ++G ++ A L +P S W +++A
Sbjct: 395 TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLAS 443
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 133/298 (44%), Gaps = 45/298 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K + D ++ + + + G + A+ VF SM +SSV++++M++GY+ + + A
Sbjct: 192 KTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALL 251
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPK----RDVVSWNTMLSGYA 165
++ + + L +S + S AA + + ++ K +V ++ + YA
Sbjct: 252 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYA 311
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ G + IF + EKN WN +++ + ++ R +E +LFE
Sbjct: 312 KCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFE---------------- 355
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFT 280
K ++ G +EV+++++++ + E +R F+ +V
Sbjct: 356 --KMQQDGMHP---------NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 404
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDM----ARELFE 333
++ MV + G + EA + ++P + T S W +++A K +++ A++LFE
Sbjct: 405 YSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFE 462
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/537 (43%), Positives = 325/537 (60%), Gaps = 38/537 (7%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+F +++ YV+ +++A +FD MP++N +SW MI+ Y + K A EL M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 338 KNVA-----------SWNTM-------------------------ITGYAQSGEITHARN 361
NV S N M I +A+ GE A +
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+FD M D I W +II G+AQ+ S+ +L LF MKR G ++ TSVL C LA
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
LELG Q H +VK ++ + NAL+ MYCKCGS+E+A F ++ ++DVI+W+TMI+G
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
A++G+ ++AL LFE MK+ G KP+ IT+VG+L ACSH GL+E G YF SM + YG+ P
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+HY CM+DLLG+AG+LD+A L+ M EPDA TW LLGACR+ LAE AA+ +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 453
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
++PE+AG Y LLSN+YA S +W V ++R +MRDRG+KK G SW+EV ++H F +G
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D HP+ + L +L +L G+V T VL D+ E+ E LR+HSEKLA+A+G++
Sbjct: 514 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++P + IR+ KNLR+C DCH K SK+ R I++R R+HHF G CSCGDYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 46/272 (16%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H++ + R N +I+ Y+ L+ A Q+FDQMPQR+++SW MIS Y + K
Sbjct: 86 HLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQK 145
Query: 142 ARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAARR---IFDRMLEKNEISWNGLLAA 194
A L +M + +V +++++L + NG +D I LE + + L+
Sbjct: 146 ALELLVLMLRDNVRPNVYTYSSVLR--SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV---------- 244
+ + G E+A +F+ + + WNS++GGF + R A +F RM
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 245 ---------------------------RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+D + N ++ Y + L +A R+F + +D
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
V TW+ M+SG QNG EA +F+ M T
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 59/355 (16%)
Query: 11 HSSCILHQHTQSINRLQSPANTNP-YPSKKTLKRHLNSKSRNKPKPAG------DWDIRQ 63
+S C +HQ + L N P + ++ R N S + G + D+
Sbjct: 137 YSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFV 196
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ--- 120
+ I + G + AL VF+ M ++ +N++I G+ N + D A ++F +M +
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 121 ----------------------------------RDLVSWNVMISGYVRNKSLSAARNLF 146
+DL+ N ++ Y + SL A +F
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIE 202
M +RDV++W+TM+SG AQNGY+ A ++F+RM + N I+ G+L A G +E
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 203 EACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG 256
+ F S + + ++ K +L DA + + M D V+W T++
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 257 --YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+N LAE A+++ P +D T+T + + Y + K D I M ++
Sbjct: 437 CRVQRNMVLAEYAAKKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDR 490
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 129/297 (43%), Gaps = 34/297 (11%)
Query: 377 IIAGYAQSGYSED---SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
+++ + + Y D +++ ++ +G + + ++ ++ C + ++ G + L
Sbjct: 29 LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLY 88
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
G F+ N L+ MY K + +A+ F+++ ++VISW TMI+ Y++ + AL
Sbjct: 89 FNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALE 148
Query: 494 LFESMKTVGIKPDDITMVGILSACS--------HTGLVEKGTE-----------YFYSMN 534
L M ++P+ T +L +C+ H G++++G E F +
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 535 R--------DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLG 583
D V ++ + ++ + R D A L K M F + AT ++L
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
AC EL +A I + + ++ + L ++Y G D +V +M++R V
Sbjct: 269 ACTGLALLELGMQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/526 (42%), Positives = 329/526 (62%), Gaps = 12/526 (2%)
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAG 318
++ A ++F + ++FTW M+ GY ++ A ++ M E +T ++ ++
Sbjct: 90 MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA 149
Query: 319 YVQTKRMDMAR-ELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
K MD+ E ++ +N V NT++ YA G A LF+ M + + +
Sbjct: 150 I--AKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 207
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+W ++I GYA +G ++L LF EM G + S+LS CA L +L LG++ H +
Sbjct: 208 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 267
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
VKVG + GNALL +Y KCGS+ +A+ F+E+ +K V+SW ++I G A +GFGK+AL
Sbjct: 268 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEAL 327
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
LF+ ++ G+ P +IT VG+L ACSH G+V++G +YF M +YG++P +HY CMVDL
Sbjct: 328 ELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDL 387
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG + +A ++NMP +P+A W LLGAC ++G L E A + ++EP+++G Y
Sbjct: 388 LGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDY 447
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSNLYA+ RW DV KVR M GVKK G+S +E++N++H F +GD HP+ + IY
Sbjct: 448 VLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIY 507
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
L E+ LK +G+V VL D+ EEEKE L YHSEK+A+A+ +++ AG PIRV+
Sbjct: 508 VKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVV 567
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLRVC DCH AIK ISK+ R I++RD +RFHHF G CSC DYW
Sbjct: 568 KNLRVCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 161/372 (43%), Gaps = 61/372 (16%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+S A +F + ++ +WNTM+ GYA++ A ++ +M +E + ++ LL A
Sbjct: 90 MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA 149
Query: 195 YVQ--NGRIEEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+ + R E + +E V N+L+ + A +F+ M R+ V+W
Sbjct: 150 IAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTW 209
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP- 305
N++I GYA N EA LF E ++ V FT +++S + G + R M
Sbjct: 210 NSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVK 269
Query: 306 ---EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
+ N + NA++ Y + + A ++F+ M K+V SW ++I
Sbjct: 270 VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIV-------------- 315
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
G A +G+ +++L LF E++R G + F VL C++ +
Sbjct: 316 -----------------GLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMV 358
Query: 423 ELG-------KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVIS 474
+ G K+ +G + K+ GC V + + G V++A+ + + + + +
Sbjct: 359 DEGFDYFKRMKEEYGIVPKIE-HYGCMVD-----LLGRAGLVKQAHEFIQNMPMQPNAVV 412
Query: 475 WNTMIAGYARHG 486
W T++ HG
Sbjct: 413 WRTLLGACTIHG 424
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 167/418 (39%), Gaps = 74/418 (17%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMISGYVR 135
A +F+ + + ++N MI GY + PA +++ QM + D ++ ++ +
Sbjct: 93 AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152
Query: 136 NKSLS--------AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
+ A RN FE + V NT++ YA G+A++A ++F+ M E+N ++
Sbjct: 153 LMDVREGEKVHSIAIRNGFESL----VFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 208
Query: 188 WNGLLAAYVQNGRIEEACMLFESKA-------NWEVVSW--------------------- 219
WN ++ Y NGR EA LF + +VS
Sbjct: 209 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 268
Query: 220 -----------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
N+L+ + K + A +FD M + VSW ++I G A N + EA
Sbjct: 269 KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALE 328
Query: 269 LFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGY 319
LF+E K + T+ ++ G VDE F M E+ + + M+
Sbjct: 329 LFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLL 388
Query: 320 VQTKRMDMARELFEAMTCK-NVASWNTM-----ITGYAQSGEITHARNLFDRMPQHDCIS 373
+ + A E + M + N W T+ I G+ GE+ A+ L P+H
Sbjct: 389 GRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQ-LLQLEPKHSG-D 446
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ + YA D ++ M R G + ++P S++ L +G + H Q
Sbjct: 447 YVLLSNLYASEQRWSDVHKVRRTMLREG--VKKTPGHSLVELRNRLHEFVMGDRSHPQ 502
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 61/251 (24%)
Query: 70 THMRNGC--CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------ 121
HM C +SA +F M R+ V++N++I+GY LNG+ + A +F +M R
Sbjct: 182 VHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDG 241
Query: 122 ---------------------------------DLVSWNVMISGYVRNKSLSAARNLFEM 148
+L + N ++ Y + S+ A +F+
Sbjct: 242 FTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDE 301
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA 204
M ++ VVSW +++ G A NG+ A +F + L +EI++ G+L A G ++E
Sbjct: 302 MEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG 361
Query: 205 CMLFES-KANWEVVS-------WNSLMG--GFVKQKRLGDAKWIFDRMPVR-DEVSWNTM 253
F+ K + +V L+G G VKQ A MP++ + V W T+
Sbjct: 362 FDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQ-----AHEFIQNMPMQPNAVVWRTL 416
Query: 254 ITGYAQNNYLA 264
+ + +LA
Sbjct: 417 LGACTIHGHLA 427
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 38/223 (17%)
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
C + A+ F +I + ++ +WNTMI GYA AL L+ M I+PD T +
Sbjct: 87 CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146
Query: 514 LSACS-----------HTGLVEKGTEYFY----SMNRDYGVIPNSKHYTCMVDLLGRA-- 556
L A + H+ + G E ++ Y +++ + +L+
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNL 206
Query: 557 -------------GRLDEAQNLMKNMPF---EPDAATWGALLGACRLYGKTELAEKAAEV 600
GR +EA L + M EPD T +LL AC G L +A
Sbjct: 207 VTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVY 266
Query: 601 IFEMEPE---NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
+ ++ + +AG +L +LYA G KV +M ++ V
Sbjct: 267 MVKVGLDGNLHAGNALL--DLYAKCGSIRQAHKVFDEMEEKSV 307
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/702 (34%), Positives = 397/702 (56%), Gaps = 57/702 (8%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
++S Y G L R+VFD M ++++ WN M+S Y + + LF++M ++ +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI--- 196
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK----AN 213
+ ++A +FD++ +++ ISWN +++ YV NG E +++ +
Sbjct: 197 --------EGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWI--------FDRMPVRDEVSWNTMITGYAQNNYLAE 265
++ + S++ G L K + F+R R S NT++ Y++ L
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER---RINFS-NTLLDMYSKCGDLDG 304
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
A R+FE+ ++V +WT+M++GY ++G+ D A + M ++ + V+ +++ +
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACAR 364
Query: 322 TKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ +D +++ + + N+ S N ++ YA+ G + A ++F M D ISW +
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTM 424
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I E+K + VL CA+L++LE GK++HG +++ G+
Sbjct: 425 IG----------------ELKP-----DSRTMACVLPACASLSALERGKEIHGYILRNGY 463
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ V NAL+ +Y KCG + A F+ I KD++SW MIAGY HG+G +A+ F
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNE 523
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ GI+PD+++ + IL ACSH+GL+E+G +FY M D+ + P +HY CMVDLL R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
L +A ++ +P PDA WGALL CR Y ELAEK AE +FE+EPEN+G YVLL+N
Sbjct: 584 NLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLAN 643
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG-DTLHPEKDRIYAYLE 676
+YA + +W +V ++R K+ +G++K G SW+E++ KV+ F G ++ HP I + L+
Sbjct: 644 IYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLK 703
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
++ K+K++G TK L + E +KE L HSEKLA+A+G+L++P + IRV KNLR
Sbjct: 704 KMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC DCH K +SK R I+LRD NRFHHF G CSC +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 40/360 (11%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGY 133
+SA +F+ + R +S+N+MISGY+ NG + ++ QM DL + ++ G
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 134 VRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ +LS + + + K R + NT+L Y++ G D A R+F++M E+N +SW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 190 GLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A Y ++GR + A L + +VV+ S++ + L + K + D +
Sbjct: 322 SMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 246 DEVS----WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS--------------- 286
+ S N ++ YA+ + A +F VKD+ +W M+
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPA 441
Query: 287 ----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
++ GK ++ + V+ NA++ YV+ + +AR LF+ + K++ S
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVA-NALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
W MI GY G A F+ M + D +S+ +I+ + SG E R F MK
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 166/401 (41%), Gaps = 81/401 (20%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM------------------------------ 87
D D+ WN I+ ++ NG + L ++ M
Sbjct: 213 DRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKA 272
Query: 88 ----------PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
RR + S N ++ Y G LD A +VF++M +R++VSW MI+GY R+
Sbjct: 273 VHSLAIKSSFERRINFS-NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG 331
Query: 138 SLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWN 189
A L + M K DVV+ ++L A++G D + + D + +E N N
Sbjct: 332 RSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCN 391
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR--------------LGDA 235
L+ Y + G +E A +F + +++SWN+++G R L
Sbjct: 392 ALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERG 451
Query: 236 K----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
K +I D N ++ Y + L A+ LF+ P KD+ +WT M++GY +
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511
Query: 292 GKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-------V 340
G +EA F DA E + VS+ +++ + ++ F M KN +
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM--KNDFNIEPKL 569
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ M+ +++G ++ A + +P D W A++ G
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 133/317 (41%), Gaps = 44/317 (13%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPAR 112
G+ ++ W I + R+G D A+ + M + V+ +++ +G LD +
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372
Query: 113 QVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM-------- 160
V D + + +L N ++ Y + S+ AA ++F M +D++SWNTM
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDS 432
Query: 161 ------LSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFES 210
L A + + I +L S N L+ YV+ G + A +LF+
Sbjct: 433 RTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNNYLA 264
+ ++VSW ++ G+ +A F+ M P DEVS+ +++ + + L
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP--DEVSFISILYACSHSGLLE 550
Query: 265 EAQRLFEEAPVKDVFT-------WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMI 316
+ R F +K+ F + MV + G + +A + +P + W A++
Sbjct: 551 QGWRFF--YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Query: 317 AGYVQTKRMDMARELFE 333
G +++A ++ E
Sbjct: 609 CGCRNYHDIELAEKVAE 625
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/699 (35%), Positives = 395/699 (56%), Gaps = 50/699 (7%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNV 66
+R + + ++++H + + A +N P + + L + + + I Q N
Sbjct: 3 MRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTA-------IFQCNS 55
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
I+ H RNG A +F M RS VS+ AMIS Y NG++ A QVFD+MP R S+
Sbjct: 56 QISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 127 NVMISGYVRNK-SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-- 183
N MI+ ++NK L A LF +P+++ VS+ TM++G+ + G D A ++ K
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFR 175
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ ++ N LL+ Y++ G+ EA +F+ A EVVS +S++ G+ K R+ DA+ +FDRM
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK----------------------- 276
R+ ++W MI GY + + + LF +E VK
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 277 -------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
D+F +++S Y + G + EA+ +F M K++VSWN++I G VQ K
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
++ A ELFE M K++ SW MI G++ GEI+ LF MP+ D I+W A+I+ +
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVS 415
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+GY E++L F +M + N F+SVLS A+LA L G Q+HG++VK+ V
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
N+L+ MYCKCG+ +AY F I + +++S+NTMI+GY+ +GFGK AL LF +++ G
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ +T + +LSAC H G V+ G +YF SM Y + P HY CMVDLLGR+G LD+A
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
NL+ MP +P + WG+LL A + + + +LAE AA+ + E+EP++A YV+LS LY+ G
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+ D ++ + + +KK G SW+ ++ +VH F GD
Sbjct: 656 KNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGD 694
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/540 (41%), Positives = 332/540 (61%), Gaps = 40/540 (7%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
VF T +V+ YV+ G +D+AR + D MPE++ VSW MI+GY QT+R A +LF M
Sbjct: 77 VFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLR 136
Query: 336 ---------------TC---------KNVASW-------------NTMITGYAQSGEITH 358
+C K V S ++++ YA+S I
Sbjct: 137 AGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQE 196
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
AR +FD +P+ D +S AII+GYAQ G E++L LF ++ G + N FT++++ +
Sbjct: 197 ARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSG 256
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
LASL+ GKQ+H +++ + N+L+ MY KCG + + F+ ++++ V+SWN M
Sbjct: 257 LASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAM 316
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ GY RHG G + + LF+ + +KPD +T++ +LS CSH GLV++G + F ++ ++
Sbjct: 317 LMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQS 375
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ ++ HY C++DLLGR+GRL++A NL++NMPFE + WG+LLGACR++ + E A
Sbjct: 376 ALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVA 435
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + EMEPENAG YV+LSN+YAA+G W DV KVR M ++ V K G SW+ + +HTF
Sbjct: 436 QKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTF 495
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
+ HP K I A ++E+ +K GFV VLHDV +E+KE ML HSEKLA+ +
Sbjct: 496 HSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITF 555
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G+++ P G IRVMKNLR+C DCHN K +SK+ R I LRD NRFH + G+C+CGDYW
Sbjct: 556 GLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 142/285 (49%), Gaps = 19/285 (6%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KN 184
+++ YVR +L ARN+ + MP+R VVSW TM+SGY+Q A +F +ML N
Sbjct: 83 LVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPN 142
Query: 185 EISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
E + +L + I + +L ++ + +SL+ + K + + +A+ +FD
Sbjct: 143 EYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFD 202
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+P RD VS +I+GYAQ EA ++L+ E + T+T +V+ +D
Sbjct: 203 TLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDY 262
Query: 297 ARMIFDAMPEKNTVSW----NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+ + + K + N++I Y + ++ +R +F+ M ++V SWN M+ GY +
Sbjct: 263 GKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR 322
Query: 353 SGEITHARNLFDRMPQH---DCISWAAIIAGYAQSGYSEDSLRLF 394
G +LF + + D ++ A+++G + G ++ L +F
Sbjct: 323 HGLGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIF 367
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 176/387 (45%), Gaps = 63/387 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--------- 118
+T ++R G D A +V + MP RS VS+ MISGY + A +F +M
Sbjct: 84 VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 143
Query: 119 ------------PQRD---------LVSWNV---------MISGYVRNKSLSAARNLFEM 148
PQ LV N ++ Y +++++ AR +F+
Sbjct: 144 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 203
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAA----RRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+P+RDVVS ++SGYAQ G + A R+++ ++ N +++ L+ A ++
Sbjct: 204 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYG 263
Query: 205 ----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++ + + V NSL+ + K +L ++ +FD M R VSWN M+ GY ++
Sbjct: 264 KQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRH 323
Query: 261 NYLAEAQRLFEE--APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-----NTVSW 312
E LF++ VK D T A++SG G VDE IFD + ++ +T +
Sbjct: 324 GLGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY 383
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTM-----ITGYAQSGEITHARNLFDRM 366
+I ++ R++ A L E M ++ S W ++ + GE+ A+ L +
Sbjct: 384 GCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELV-AQKLLEME 442
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRL 393
P+ + ++ + YA +G +D ++
Sbjct: 443 PE-NAGNYVILSNIYAAAGMWKDVFKV 468
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 196/402 (48%), Gaps = 34/402 (8%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV-- 155
+++ Y+ G LD AR V D+MP+R +VSW MISGY + + A +LF M + +
Sbjct: 83 LVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPN 142
Query: 156 --SWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----NGLLAAYVQNGRIEEACMLFE 209
+ T+L+ + +++ +++ N S + LL Y ++ I+EA +F+
Sbjct: 143 EYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFD 202
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMIT---GYAQNNY 262
+ +VVS +++ G+ ++ +A +F ++ + V++ T++T G A +Y
Sbjct: 203 TLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDY 262
Query: 263 LAEAQRLF--EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY- 319
+ L +E P V +++ Y + GK+ +R +FD M E++ VSWNAM+ GY
Sbjct: 263 GKQVHALILRKELPFF-VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYG 321
Query: 320 ---VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI---- 372
+ + + + ++L + + +V + +++G + G + ++FD + +
Sbjct: 322 RHGLGHEVISLFKDLHKEVKPDSV-TLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHT 380
Query: 373 -SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ II +SG E +L L M S + S+L C A++ +G+ + +
Sbjct: 381 GHYGCIIDLLGRSGRLEKALNLIENMPFES---TPSIWGSLLGACRVHANVHVGELVAQK 437
Query: 432 LVKVGFE-AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L+++ E AG +V L +Y G ++ + + +++K V
Sbjct: 438 LLEMEPENAGNYV--ILSNIYAAAGMWKDVFKVRKLMLEKTV 477
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 105/205 (51%), Gaps = 17/205 (8%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ + ++ C +L G+Q+H +++ + F+G L+ MY +CG++++A + + +
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++ V+SW TMI+GY++ +AL LF M G P++ T+ +L++CS G +
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCS-------GPQ 157
Query: 529 YFYSMNRDYGVIPNSKHYTCM------VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
Y + + ++ + + M +D+ ++ + EA+ + +P E D + A++
Sbjct: 158 SIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP-ERDVVSCTAII 216
Query: 583 GACRLYGKTELAEKAAEVIFEMEPE 607
Y + L E+A ++ ++ E
Sbjct: 217 SG---YAQKGLDEEALDLFRQLYSE 238
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/702 (34%), Positives = 400/702 (56%), Gaps = 57/702 (8%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
++S Y G L R+VFD M ++++ WN M+S Y + + LF++M ++ +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI--- 196
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----KAN 213
+ ++A +FD++ +++ ISWN +++ YV NG E +++ +
Sbjct: 197 --------EGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWI--------FDRMPVRDEVSWNTMITGYAQNNYLAE 265
++ + S++ G L K + F+R R S NT++ Y++ L
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER---RINFS-NTLLDMYSKCGDLDG 304
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
A R+FE+ ++V +WT+M++GY ++G D A ++ M ++ + V+ +++ +
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACAR 364
Query: 322 TKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ +D +++ + + N+AS N ++ YA+ G + A ++F M D ISW +
Sbjct: 365 SGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM 424
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+ E+K + +L CA+L++LE GK++HG +++ G+
Sbjct: 425 VG----------------ELKP-----DSRTMACILPACASLSALERGKEIHGYILRNGY 463
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ V NAL+ +Y KCG + A F+ I KD++SW MIAGY HG+G +A+ F
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNE 523
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ GI+PD+++ + IL ACSH+GL+E+G +FY M D+ + P +HY CMVDLL R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
L +A ++ +P PDA WGALL CR+Y ELAEK AE +FE+EPEN G YVLL+N
Sbjct: 584 NLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLAN 643
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG-DTLHPEKDRIYAYLE 676
+YA + + +V ++R K+ +G++K G SW+E++ +V+ F G ++ HP +I + L+
Sbjct: 644 IYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLK 703
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
++ K+K++G+ TK L + E +KE L HSEKLA+A+G+L++P + IRV KNLR
Sbjct: 704 KMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC DCH K +SK R I+LRD+NRFHHF G CSC +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 40/360 (11%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGY 133
+SA +F+ + R +S+N+MISGY+ NG + ++ QM DL + ++ G
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 134 VRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ +LS + + + K R + NT+L Y++ G D A R+F++M E+N +SW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 190 GLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A Y ++G + A +L + +VV+ S++ + L + K + D +
Sbjct: 322 SMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 246 DEVS----WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS--------------- 286
+ S N ++ YA+ + A +F VKD+ +W MV
Sbjct: 382 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPA 441
Query: 287 ----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
++ GK ++ + V+ NA++ YV+ + +AR LF+ + K++ S
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVA-NALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
W MI GY G A F+ M + D +S+ +I+ + SG E R F MK
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 165/401 (41%), Gaps = 81/401 (20%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM------------------------------ 87
D D+ WN I+ ++ NG + L ++ M
Sbjct: 213 DRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKA 272
Query: 88 ----------PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
RR + S N ++ Y G LD A +VF++M +R++VSW MI+GY R+
Sbjct: 273 VHSLAIKSSFERRINFS-NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG 331
Query: 138 SLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWN 189
A L + M K DVV+ ++L A++G D + + D + + N N
Sbjct: 332 WSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCN 391
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR--------------LGDA 235
L+ Y + G +E A +F + +++SWN+++G R L
Sbjct: 392 ALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERG 451
Query: 236 K----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
K +I D N ++ Y + L A+ LF+ P KD+ +WT M++GY +
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511
Query: 292 GKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-------V 340
G +EA F DA E + VS+ +++ + ++ F M KN +
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM--KNDFNIEPKL 569
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ M+ +++G ++ A + +P D W A++ G
Sbjct: 570 EHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 610
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 132/317 (41%), Gaps = 44/317 (13%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPAR 112
G+ ++ W I + R+G D A+ + M + V+ +++ +G LD +
Sbjct: 313 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372
Query: 113 QVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM-------- 160
V D + ++ S N ++ Y + S+ A ++F M +D++SWNTM
Sbjct: 373 DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDS 432
Query: 161 ------LSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFES 210
L A + + I +L S N L+ YV+ G + A +LF+
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNNYLA 264
+ ++VSW ++ G+ +A F+ M P DEVS+ +++ + + L
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP--DEVSFISILYACSHSGLLE 550
Query: 265 EAQRLFEEAPVKDVFT-------WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMI 316
+ R F +K+ F + MV + G + +A + +P + W A++
Sbjct: 551 QGWRFF--YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608
Query: 317 AGYVQTKRMDMARELFE 333
G +++A ++ E
Sbjct: 609 CGCRIYHDIELAEKVAE 625
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/545 (42%), Positives = 334/545 (61%), Gaps = 15/545 (2%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM- 304
D V NT++ YA+ L A++LF+E +DV TWTA+++GY Q+ + +A ++ M
Sbjct: 49 DLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEML 108
Query: 305 -----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC------KNVASWNTMITGYAQS 353
P + T++ A V + + R+L C NV ++ YA+
Sbjct: 109 RIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHG--LCLRYGYDSNVYVSCAILDMYARC 166
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
+ A+ +FD M + +SW A+IAGYA+ G + + LF M R + ++SVL
Sbjct: 167 HHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVL 226
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
CA++ SLE GK +H ++K G + FVGN LL MY K GS+E+A F+ + +DV+
Sbjct: 227 CACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVV 286
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWN+M+ GY++HG GK AL FE M I P+DIT + +L+ACSH GL+++G YF M
Sbjct: 287 SWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYF-DM 345
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+ Y V P HY MVDLLGRAG LD A + MP +P AA WGALLGACR++ EL
Sbjct: 346 MKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMEL 405
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
AAE IFE++ G +VLL N+YA +GRW D +KVR M++ GVKK SW+E++N
Sbjct: 406 GGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMEN 465
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+VH F D HP++ I+ E++ K+K+ G+V + VL + ++E+E L+YHSEK
Sbjct: 466 EVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEK 525
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+A+ +L+ P G IR+ KN+R+C DCH+A K +SK+V R II+RD NRFHHF G+CS
Sbjct: 526 LALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACS 585
Query: 774 CGDYW 778
C DYW
Sbjct: 586 CEDYW 590
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 155/371 (41%), Gaps = 82/371 (22%)
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ G+I A +L S+ ++V N+L+ + K L A+ +FD M RD V+W +IT
Sbjct: 31 LNEGKIIHA-LLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALIT 89
Query: 256 GYAQNNYLAEAQRLFEE------APVK--------------------------------- 276
GY+Q++ +A L E P +
Sbjct: 90 GYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGY 149
Query: 277 --DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
+V+ A++ Y + ++EA++IFD M KN VSWNA+IAGY + + D A LF
Sbjct: 150 DSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSN 209
Query: 335 MTCKNV----------------------ASW-----------------NTMITGYAQSGE 355
M +NV W NT++ YA+SG
Sbjct: 210 MLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGS 269
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I A+ +FDR+ + D +SW +++ GY+Q G + +L+ F EM R N F VL+
Sbjct: 270 IEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTA 329
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS- 474
C++ L+ G+ + K E ++ + + G ++ A E+ K +
Sbjct: 330 CSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAV 389
Query: 475 WNTMIAGYARH 485
W ++ H
Sbjct: 390 WGALLGACRMH 400
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 152/361 (42%), Gaps = 68/361 (18%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
+ NS R V N +++ Y G L AR++FD+M RD+V+W +I+GY ++ A
Sbjct: 41 LLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDA 100
Query: 143 RNLFEMMPK-----------------------------------------RDVVSWNTML 161
L M + +V +L
Sbjct: 101 LLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAIL 160
Query: 162 SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----V 217
YA+ + + A+ IFD M+ KNE+SWN L+A Y + G+ ++A LF + V
Sbjct: 161 DMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHF 220
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW---------NTMITGYAQNNYLAEAQR 268
+++S++ L KW+ M + W NT++ YA++ + +A++
Sbjct: 221 TYSSVLCACASMGSLEQGKWVHALM-----IKWGEKLVAFVGNTLLDMYAKSGSIEDAKK 275
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKR 324
+F+ +DV +W +M++GY Q+G A F+ M N +++ ++
Sbjct: 276 VFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGL 335
Query: 325 MDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIA 379
+D R F+ M NV + + TM+ ++G + A MP + W A++
Sbjct: 336 LDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLG 395
Query: 380 G 380
Sbjct: 396 A 396
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 159/366 (43%), Gaps = 76/366 (20%)
Query: 45 LNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY-- 102
LNS+ R+ D+ N + + + G A +F+ M R V++ A+I+GY
Sbjct: 42 LNSRFRD--------DLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQ 93
Query: 103 -------------LLNGQLDPARQVF-------------DQMPQRDL--------VSWNV 128
+L L P + D + R L NV
Sbjct: 94 HDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNV 153
Query: 129 MISG-----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
+S Y R L A+ +F++M ++ VSWN +++GYA+ G D A +F ML +
Sbjct: 154 YVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRE 213
Query: 184 N----EISWNGLLAAYVQNGRIEEACMLFESKANW--EVVSW--NSLMGGFVKQKRLGDA 235
N +++ +L A G +E+ + W ++V++ N+L+ + K + DA
Sbjct: 214 NVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDA 273
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFTWTAMVSGYV 289
K +FDR+ RD VSWN+M+TGY+Q+ A + FEE AP + T+ +++
Sbjct: 274 KKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP--NDITFLCVLTACS 331
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYV-------QTKRMDMARELFEAMTCKNVAS 342
G +DE R FD M + N I+ YV + +D A + M K A+
Sbjct: 332 HAGLLDEGRHYFDMMKKYNV---EPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAA 388
Query: 343 -WNTMI 347
W ++
Sbjct: 389 VWGALL 394
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
R ++L C +L L GK +H L+ F + N LL +Y KCG + A F+
Sbjct: 15 REICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFD 74
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE- 524
E+ +DV++W +I GY++H +DAL+L M +G+KP+ T+ +L A S G +
Sbjct: 75 EMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDV 134
Query: 525 -KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+G + + + YG N ++D+ R L+EAQ L+ ++ + +W AL+
Sbjct: 135 LQGRQ-LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQ-LIFDVMVSKNEVSWNALIA 192
Query: 584 ACRLYGKTELAEKAAEVIFEMEPEN 608
Y + +KA + M EN
Sbjct: 193 G---YARKGQGDKAFCLFSNMLREN 214
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/635 (38%), Positives = 374/635 (58%), Gaps = 17/635 (2%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
++ YA+ G+ ++AR++FD+ + +WN ++ AY + G + EA L+ A+ V
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 220 NSLMGGFVK------QKRLGDAKW--IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+S +K R G+ W D+ D ++ YA+ + EA R+F+
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFD 164
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDM 327
+ +D+ WT M++G QNG+ EA I+ M +K ++ G +Q M
Sbjct: 165 KMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224
Query: 328 ARELFEAMTCKN----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
+ M K+ V +++ YA++G + A +F RM + ISW+A+I+G+AQ
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQ 284
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G++ ++L+L ++M+ +G + + SVL C+ + L+LGK +HG +V+ C
Sbjct: 285 NGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVS 343
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
A++ MY KCGS+ A F++I +D ISWN +IA Y HG G++AL LF M+ +
Sbjct: 344 STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNV 403
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
KPD T +LSA SH+GLVEKG +F M +Y + P+ KHY CMVDLL RAGR++EAQ
Sbjct: 404 KPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQ 463
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
L+++M EP A W ALL C +GK + E AA+ + E+ P++ G+Y L+SN +A +
Sbjct: 464 ELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATAR 523
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW +V++VR M+ G+KKV GYS +EV K+H F + D H + + I L +L++++K
Sbjct: 524 RWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMK 583
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
G+V T+ VLH++ EE KE ML HSE+LA+A+G+L+ G + + KNLRVC DCH
Sbjct: 584 AMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHE 643
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A K ISKIV R I++RD RFHHF G CSCGDYW
Sbjct: 644 ATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 215/476 (45%), Gaps = 62/476 (13%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----- 152
+I Y G ++ ARQVFD+ PQ + +WN MI Y R ++ A +L+ M
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 153 ----------------------------------DVVSWNTMLSGYAQNGYADAARRIFD 178
DV +L+ YA+ G D A R+FD
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFD 164
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAK- 236
+M ++ + W ++ QNG+ EA ++ V +M G ++ LG +K
Sbjct: 165 KMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224
Query: 237 ------WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
++ + + D + +++ YA+N +L A +F K+V +W+A++SG+ Q
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQ 284
Query: 291 NGKVDEA-RMIFDAMP---EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK---NVASW 343
NG A +++ D + ++VS +++ Q + + + + + + + S
Sbjct: 285 NGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSS 344
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+I Y++ G ++ AR +FD++ D ISW AIIA Y G E++L LF++M+ +
Sbjct: 345 TAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVK 404
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLV---KVGFEAGCFVGNALLVMYCKCGSVEEA 460
+ + F S+LS ++ +E G+ +V K+ + ++ + + G VEEA
Sbjct: 405 PDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYA--CMVDLLSRAGRVEEA 462
Query: 461 YHAFEEIVDKDVIS-WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
E ++ + I+ W +++G H GK + + K + + PDD + ++S
Sbjct: 463 QELIESMITEPGIAIWVALLSGCLNH--GKFLIGEMAAKKVLELNPDDPGIYSLVS 516
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 149/324 (45%), Gaps = 25/324 (7%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPAR 112
G D+ W IT +NG A+ ++ M ++ V +I G
Sbjct: 167 GRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGL 226
Query: 113 QVFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
+ M ++D+ + ++ Y +N L A +F M ++V+SW+ ++SG+AQNG
Sbjct: 227 SIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNG 286
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML---FESKANWEVVSWNS 221
+A A ++ M + + +S +L A Q G ++ + + +++ VS +
Sbjct: 287 FAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSSTA 346
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-D 277
++ + K L A+ +FD++ RD +SWN +I Y + EA LF E VK D
Sbjct: 347 VIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPD 406
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
T+ +++S + +G V++ R F M + + + M+ + R++ A+EL
Sbjct: 407 HATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELI 466
Query: 333 EAM-TCKNVASWNTMITGYAQSGE 355
E+M T +A W +++G G+
Sbjct: 467 ESMITEPGIAIWVALLSGCLNHGK 490
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/644 (39%), Positives = 366/644 (56%), Gaps = 33/644 (5%)
Query: 164 YAQNGYADAARRIFDRMLE--------KNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
Y++ G +AR +FD N N +L AY GR EA L+
Sbjct: 68 YSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMG 127
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMP----VR-----DEVSWNTMITGYAQNNYLAEA 266
V N+ FV + + +F + VR D ++ YA+ + +A
Sbjct: 128 V-GVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDA 186
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN------TVSWNAMIAGYV 320
+F+ ++DV WTAM++ Y Q + +A M+F M E+ T A G +
Sbjct: 187 HEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQL 246
Query: 321 QTKRMDMARELFEAMT--CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
RM ++ + + +V+ N+++ YA+ G + AR +FDRM + + ISW +++
Sbjct: 247 GDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSML 306
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL--STCANLASLELGKQLHGQLVKVG 436
+GY Q+G D+L LF +M+ + +P T+++ S C+ L S LG++LH ++
Sbjct: 307 SGYTQNGRPTDALSLFNQMQ--ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSK 364
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFE--EIVDKDVISWNTMIAGYARHGFGKDALML 494
+ + NA++ MY KCG ++ A F E+ ++DV SWN +I+GY HG GK+AL L
Sbjct: 365 MDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALEL 424
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F M+ G++P+DIT ILSACSH GL+++G + F M + V P KHY CMVD+LG
Sbjct: 425 FSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLG 483
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAG L+EA L+K +P P WGALL ACR++G TEL E AA +F++EPE+ G YVL
Sbjct: 484 RAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVL 543
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
+SN+YAAS +W +V VR M+ RG+KK +S +E +VH F D P +Y
Sbjct: 544 MSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRK 603
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
+E L ++K G+V VLHDV E+KEH+L YHSEKLAVA+GI+ + G PI+V KN
Sbjct: 604 VESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKN 663
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LRVC DCH A K IS I GR II+RD NRFHHF GG CSCGDYW
Sbjct: 664 LRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 119/539 (22%), Positives = 202/539 (37%), Gaps = 136/539 (25%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKR--------DVVSWNTMLSGYAQNGYADAARRIFDRM 180
+I Y + L +AR LF+ + NTML YA G + A ++ M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN---------SLMGGFVKQKR 231
++ + N +V E +F + +VV +L+ + K
Sbjct: 124 -QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGE 182
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----------------- 274
+GDA +FDRM +RD V W MIT Y Q +A LF +
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242
Query: 275 ----------------------VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
+ DV ++V Y + G V+ AR++FD M E+N +SW
Sbjct: 243 VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISW 302
Query: 313 NAMIAGYVQTKRMDMARELFEAM-----------------TCKNVAS------------- 342
N+M++GY Q R A LF M C + S
Sbjct: 303 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVIS 362
Query: 343 ---------WNTMITGYAQSGEITHARNLFD--RMPQHDCISWAAIIAGYAQSGYSEDSL 391
N ++ Y + G++ A +F+ + + D SW +I+GY G+ +++L
Sbjct: 363 SKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEAL 422
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF M+ G N FTS+LS C++ ++ G++ + K+
Sbjct: 423 ELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLS--------------- 467
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
V ++ + M+ R GF +A F +K + +P D
Sbjct: 468 ----------------VRPEMKHYACMVDMLGRAGFLNEA---FRLIKKIPSRPSDEVWG 508
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+L AC G E G + N + + P ++ +Y M ++ + + E + + +NM
Sbjct: 509 ALLLACRIHGNTELGE---IAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNM 564
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 121/247 (48%), Gaps = 14/247 (5%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAA--------IIAGYAQSGYSEDSLRLFIEM 397
+I Y++ G++ AR LFD H A ++ YA +G S +++ L+I M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+R G +N + VL CA+ G+ +HGQ+V+ GF + FV AL+ MY KCG +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+A+ F+ ++ +DV+ W MI Y + ALMLF M+ G D+IT + + SA
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243
Query: 518 SHT--GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
G + + +N G I + +V + + G ++ A+ + M E +
Sbjct: 244 GQLGDGRMAISVHGYAVLN---GFIGDVSVGNSIVGMYAKCGNVERARLVFDRME-ERNG 299
Query: 576 ATWGALL 582
+W ++L
Sbjct: 300 ISWNSML 306
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 22/304 (7%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
DL ++ Y + + A +F+ M RDVV W M++ Y Q A +F +M
Sbjct: 166 DLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQ 225
Query: 182 EK----NEISWNGLLAAYVQ--NGRIEEACMLFESKANW--EVVSWNSLMGGFVKQKRLG 233
E+ +EI+ + +A Q +GR+ + + + +V NS++G + K +
Sbjct: 226 EEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVE 285
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYV 289
A+ +FDRM R+ +SWN+M++GY QN +A LF + + T MVS
Sbjct: 286 RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 345
Query: 290 QNGKVDEAR----MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE--AMTCKNVASW 343
G R + + + +T NA++ Y++ +D A E+F + ++V+SW
Sbjct: 346 YLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSW 405
Query: 344 NTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N +I+GY G A LF RM + + I++ +I++ + +G ++ + F +M +
Sbjct: 406 NVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK 465
Query: 400 YGER 403
R
Sbjct: 466 LSVR 469
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 143/369 (38%), Gaps = 99/369 (26%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR---- 152
A++ Y G++ A +VFD+M RD+V W MI+ Y + + A LF M +
Sbjct: 172 ALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG 231
Query: 153 -----------------------------------DVVSWNTMLSGYAQNGYADAARRIF 177
DV N+++ YA+ G + AR +F
Sbjct: 232 DEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVF 291
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLF----------------------------- 208
DRM E+N ISWN +L+ Y QNGR +A LF
Sbjct: 292 DRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKH 351
Query: 209 ----------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV--RDEVSWNTMITG 256
SK + + N++M ++K L A +F+ + RD SWN +I+G
Sbjct: 352 LGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISG 411
Query: 257 YAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
Y + + EA LF V+ V T+T+++S G +DE R F M + +
Sbjct: 412 YGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPE 471
Query: 313 NAMIAGYVQT-KRMDMARELFEAMTCKNVAS------WNTM-----ITGYAQSGEITHAR 360
A V R E F + K + S W + I G + GEI A
Sbjct: 472 MKHYACMVDMLGRAGFLNEAFRLI--KKIPSRPSDEVWGALLLACRIHGNTELGEIA-AN 528
Query: 361 NLFDRMPQH 369
NLF P+H
Sbjct: 529 NLFQLEPEH 537
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 148/321 (46%), Gaps = 27/321 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + + + G + A VF+ M R+ +S+N+M+SGY NG+ A +F+QM
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326
Query: 120 QRDL----VSWNVMISG--YVRNKSLSAARNLFEMMPKRDVVSW--NTMLSGYAQNGYAD 171
+ V+ +M+S Y+ +K L + F + K D+ + N ++ Y + G D
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 386
Query: 172 AARRIFD--RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGG 225
A +F+ + E++ SWN L++ Y +G +EA LF V +++ S++
Sbjct: 387 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446
Query: 226 FVKQKRLGDAKWIF---DRMPVRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVKDV-FT 280
+ + + F ++ VR E+ + M+ + +L EA RL ++ P +
Sbjct: 447 CSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV 506
Query: 281 WTAM-----VSGYVQNGKVDEARMIFDAMPEKNT--VSWNAMIAGYVQTKRMDMARELFE 333
W A+ + G + G++ A +F PE V + + A + K ++M R+ +
Sbjct: 507 WGALLLACRIHGNTELGEI-AANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMK 565
Query: 334 AMTCKNVASWNTMITGYAQSG 354
+ K A+++ + G G
Sbjct: 566 SRGLKKPAAFSVIEFGTEVHG 586
>gi|2245038|emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein [Arabidopsis thaliana]
Length = 851
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/567 (41%), Positives = 339/567 (59%), Gaps = 33/567 (5%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMPVRDE 247
N ++A V++G I+ A +F ++WNSL+ G K R+ +A +FD +P D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
S+N M++ Y +N +AQ F+ P KD +W M++GY + G++++AR +F +M EK
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
N VSWNAMI+GY++ ++ A F+ + V +W MITGY ++ ++ A +F M
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 368 -QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ ++W A+I+GY ++ ED L+LF M G R N S +S L C
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC---------- 294
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+L+ MYCKCG + +A+ FE + KDV++WN MI+GYA+HG
Sbjct: 295 ----------------TLTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 338
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
AL LF M I+PD IT V +L AC+H GLV G YF SM RDY V P HY
Sbjct: 339 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 398
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
TCMVDLLGRAG+L+EA L+++MPF P AA +G LLGACR++ ELAE AAE + ++
Sbjct: 399 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 458
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV-----KKVTGYSWLEVQNKVHTFSVG 661
+NA YV L+N+YA+ RW DV++VR +M++ V KV GYSW+E++NKVH F
Sbjct: 459 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSS 518
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D +HPE D I+ L+ELE K+K G+ + LH+V EE+KE +L +HSEKLAVA+G +
Sbjct: 519 DRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCI 578
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHI 748
+P G I+V KNLR+C + H
Sbjct: 579 KLPQGSQIQVFKNLRICASGSRVLDHF 605
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 222/412 (53%), Gaps = 39/412 (9%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR- 112
KP+ I N I +R+G D AL VF+ M ++++++N+++ G DP+R
Sbjct: 54 KPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGI----SKDPSRM 109
Query: 113 ----QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+FD++P+ D S+N+M+S YVRN + A++ F+ MP +D SWNTM++GYA+ G
Sbjct: 110 MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRG 169
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ AR +F M+EKNE+SWN +++ Y++ G +E+A F+ VV+W +++ G++K
Sbjct: 170 EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMK 229
Query: 229 QKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--------- 278
K++ A+ +F M V ++ V+WN MI+GY +N+ + +LF + +
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 279 ----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
T T+++S Y + G++ +A +F+ M +K+ V+WNAMI+GY Q D A LF
Sbjct: 290 ALLGCTLTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFRE 349
Query: 335 MTCKNV-ASWNTMIT---GYAQSGEITHARNLFDRM-------PQHDCISWAAIIAGYAQ 383
M + W T + +G + F+ M PQ D + ++ +
Sbjct: 350 MIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD--HYTCMVDLLGR 407
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+G E++L+L M R + + F ++L C ++EL + +L+++
Sbjct: 408 AGKLEEALKLIRSMPF---RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 456
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/665 (36%), Positives = 381/665 (57%), Gaps = 36/665 (5%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN---------------EI 186
AR LF+ +P+ D + +T++S +G ++ A +I+ + E+ +
Sbjct: 117 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 176
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
S + L V + M +V N+L+ + K K + A+ +FD + VRD
Sbjct: 177 SGDALRVKEVHDDATRCGVM-------SDVFVGNALIHAYGKCKCVEGARRVFDDLVVRD 229
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV---------QNGKVDEA 297
VSW ++ + Y + + + +F E V VS + ++GK
Sbjct: 230 VVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHG 289
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ M N +A+++ Y + + AR +F+ M ++V SWN ++T Y ++ E
Sbjct: 290 FAVRHGM-VVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYE 348
Query: 358 HARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
+LF +M + D +W A+I G ++G SE+++ +F +M++ G + N +S+L
Sbjct: 349 KGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSIL 408
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
C+ +L +GK++H + + ALL MY KCG + + + F+ + KDV+
Sbjct: 409 PACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVV 468
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
+WNTMI A HG GK+AL LF+ M ++P+ +T G+LS CSH+ LVE+G + F SM
Sbjct: 469 AWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSM 528
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
RD+ V P++ HY+C+VD+ RAGRL+EA ++ MP EP A+ WGALL ACR+Y EL
Sbjct: 529 GRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVEL 588
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
A+ +A+ +FE+EP N G YV L N+ + W + S+VR+ M++RG+ K G SWL+V N
Sbjct: 589 AKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGN 648
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
KVHTF VGD + E D+IY +L+EL K+K G+ T VL D+ +EEK L HSEK
Sbjct: 649 KVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEK 708
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LAVA+GIL++ IRV KNLR+C DCHNAIK++SK+VG +I++RD+ RFHHF G+CS
Sbjct: 709 LAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCS 768
Query: 774 CGDYW 778
C D W
Sbjct: 769 CKDLW 773
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 213/453 (47%), Gaps = 49/453 (10%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVS----YNAMISGYLLNGQLDPARQVFDQMPQ-- 120
A+TTH G + A+ +++S+ R + A ++G ++V D +
Sbjct: 138 ALTTH---GLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCG 194
Query: 121 --RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
D+ N +I Y + K + AR +F+ + RDVVSW ++ S Y + G+ +F
Sbjct: 195 VMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVF- 253
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACM-LFESKANWEVVSW-------------NSLMG 224
E+ W+G+ + I AC L + K+ E+ + ++L+
Sbjct: 254 -----REMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVS 308
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFT 280
+ K + +A+ +FD MP RD VSWN ++T Y +N + LF + D T
Sbjct: 309 LYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEAT 368
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAREL----F 332
W A++ G ++NG+ +EA +F M + N ++ ++++ ++ + M +E+ F
Sbjct: 369 WNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVF 428
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
++ S ++ YA+ G++ +RN+FD M + D ++W +I A G +++L
Sbjct: 429 RHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALF 488
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK---VGFEAGCFVGNALLV 449
LF +M + N FT VLS C++ +E G Q+ + + V +A + + ++
Sbjct: 489 LFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY--SCVVD 546
Query: 450 MYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
+Y + G + EAY + + ++ +W ++A
Sbjct: 547 IYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 5/251 (1%)
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G+ AR LFD +PQ D + + +I+ G S ++++++ ++ G + + F +
Sbjct: 112 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
CA K++H + G + FVGNAL+ Y KC VE A F+++V +DV+
Sbjct: 172 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 231
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SW ++ + Y + GF + + +F M G+KP+ +T+ IL AC+ ++ G E +
Sbjct: 232 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE-IHGF 290
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+G++ N + +V L + + EA+ + MP D +W +L A Y K +
Sbjct: 291 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTA---YFKNKE 346
Query: 594 AEKAAEVIFEM 604
EK + +M
Sbjct: 347 YEKGFSLFLKM 357
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 22/237 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQ-- 113
D WN I M NG + A+ +F M + + ++ ++++ + L ++
Sbjct: 365 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 424
Query: 114 --VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
VF DL S ++ Y + L+ +RN+F+MM ++DVV+WNTM+ A +G
Sbjct: 425 CYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGK 484
Query: 172 AARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-----WNSL 222
A +FD+ML + N +++ G+L+ + +EE +F S +V ++ +
Sbjct: 485 EALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCV 544
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEAP 274
+ + + RL +A MP+ S W ++ +N LA+ A++LFE P
Sbjct: 545 VDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEP 601
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+G L+ + G A F+ I D + +T+I+ HG +A+ ++ S++ G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
IKPD + AC+ +G + E R GV+ + ++ G+ ++ A
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATR-CGVMSDVFVGNALIHAYGKCKCVEGA 218
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ + ++ D +W + L +C Y K K +V EM
Sbjct: 219 RRVFDDLVVR-DVVSWTS-LSSC--YVKCGFPRKGMDVFREM 256
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/613 (38%), Positives = 352/613 (57%), Gaps = 27/613 (4%)
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
D A IF R KN +N L+ +N R E + F W++ S + L FV
Sbjct: 90 VDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKI-SPDRLTFPFV-- 146
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
++ + + G A + + + F D F ++V YV
Sbjct: 147 --------------LKSAAALSNGGVGRALHCGILKFGLEF------DSFVRVSLVDMYV 186
Query: 290 QNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+ ++ A +FD PE + + WN +I GY + + A ELF++M K+ SWN+
Sbjct: 187 KVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNS 246
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I G+ + G++ A+ LF +MP+ + +SW ++ G++Q+G E +L F M G R N
Sbjct: 247 LINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPN 306
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
S LS CA + +L+ G ++H L GF+ +G AL+ MY KCG++E A F
Sbjct: 307 DYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFH 366
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
E +K ++ W+ MI G+A HG + AL FE MK G KPD + + +L+ACSH+G V +
Sbjct: 367 ETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNE 426
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G ++F +M R Y + P+ KHYT +VD+LGRAGRLDEA ++ MP PD WGAL AC
Sbjct: 427 GLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCAC 486
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R + E+AE A++ + ++EP++ G YV LSN YA+ GRW D +VR+ MRD G K G
Sbjct: 487 RTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPG 546
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
+S++EV +K+H F GD H IY+ L+E+ ++ G+ + VLH++ EEEKE
Sbjct: 547 WSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEE 606
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L YHSEKLA+A+GI+S G +R++KNLRVC DCH+ +K+ SK+ R IILRD RFH
Sbjct: 607 ALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFH 666
Query: 766 HFSGGSCSCGDYW 778
HF+ G CSCGDYW
Sbjct: 667 HFNDGVCSCGDYW 679
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 193/435 (44%), Gaps = 65/435 (14%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
RQ+ Q+ + ++ S + +++ ++ + S+ A ++F+ ++ +N ++ G A+N
Sbjct: 59 RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAEN 118
Query: 168 GYADAARRIFDRMLE----KNEISWNGLL--AAYVQNGRIEEA--CMLFESKANWEVVSW 219
+++ F ML+ + +++ +L AA + NG + A C + + ++
Sbjct: 119 SRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVR 178
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMP--VRDE--VSWNTMITGYAQNNYLAEAQRLFEEAPV 275
SL+ +VK + LG A +FD P V++ + WN +I GY + L +A LF+ P
Sbjct: 179 VSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPK 238
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
KD +W ++++G+++ G + A+ +F MPEKN VSW M+ G+ Q + A E F M
Sbjct: 239 KDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCM 298
Query: 336 -----------------TCKNVASWN----------------------TMITGYAQSGEI 356
C + + + ++ YA+ G I
Sbjct: 299 LEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNI 358
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
HA +F + + W+ +I G+A G+ +L+ F MK G + + F +VL+ C
Sbjct: 359 EHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNAC 418
Query: 417 ANLASLELGKQL-----HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDK 470
++ + G + G L++ + V + M + G ++EA + +
Sbjct: 419 SHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVD----MLGRAGRLDEALKFIRAMPITP 474
Query: 471 DVISWNTMIAGYARH 485
D + W + H
Sbjct: 475 DFVVWGALFCACRTH 489
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 174/383 (45%), Gaps = 29/383 (7%)
Query: 79 SALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV 134
SAL VF+ P S + +N +I GY G L A ++FD MP++D SWN +I+G++
Sbjct: 193 SALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFM 252
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNG 190
+ + A+ LF MP+++VVSW TM++G++QNG + A F MLE+ N+ +
Sbjct: 253 KMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVS 312
Query: 191 LLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
L+A + G ++ + + +V +L+ + K + A+ +F +
Sbjct: 313 ALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKG 372
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ W+ MI G+A + + +A + FE D + A+++ +G+V+E FD
Sbjct: 373 LLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFD 432
Query: 303 AMP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEI 356
M E + + ++ + R+D A + AM + W + +
Sbjct: 433 NMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNV 492
Query: 357 THA----RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
A + L P+H S+ + YA G +D+ R+ + M+ +G ++ P S
Sbjct: 493 EMAELASKKLLQLEPKHPG-SYVFLSNAYASVGRWDDAERVRVSMRDHGA--HKDPGWSF 549
Query: 413 LSTCANLASLELGKQLHGQLVKV 435
+ L G H + V++
Sbjct: 550 IEVDHKLHRFVAGDNTHNRAVEI 572
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 27/317 (8%)
Query: 339 NVASWNTMITGYAQS----GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
NV S + ++T + S + +A ++F R + + A+I G A++ E S+ F
Sbjct: 69 NVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFF 128
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+ M ++ +R F VL + A L++ +G+ LH ++K G E FV +L+ MY K
Sbjct: 129 VLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKV 188
Query: 455 GSVEEAYHAFEE----IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
+ A F+E + + V+ WN +I GY R G A LF+SM K D +
Sbjct: 189 EELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMP----KKDTGSW 244
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+++ G + + E F M N +T MV+ + G ++A M
Sbjct: 245 NSLINGFMKMGDMGRAKELFVKMPE-----KNVVSWTTMVNGFSQNGDPEKALETFFCML 299
Query: 571 FE---PDAATWGALLGACRLYGKTELAEKAAEVI----FEMEPENAGMYVLLSNLYAASG 623
E P+ T + L AC G + + + F++ N + L ++YA G
Sbjct: 300 EEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKL---NLVIGTALVDMYAKCG 356
Query: 624 RWGDVSKVRLKMRDRGV 640
KV + +++G+
Sbjct: 357 NIEHAEKVFHETKEKGL 373
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 41/268 (15%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+Q+HGQL + + V + SV+ A F+ K+ +N +I G A +
Sbjct: 59 RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAEN 118
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACS-----------HTGLVEKGTEYFYSMN 534
+ ++ F M I PD +T +L + + H G+++ G E+
Sbjct: 119 SRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEF----- 173
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRL-DEAQNLMKNMPFEPDAATWGALL-GACRLYGKTE 592
D V + V+ LG A ++ DE+ +KN W L+ G CR+ +
Sbjct: 174 -DSFVRVSLVDMYVKVEELGSALKVFDESPESVKN----GSVLIWNVLIHGYCRM---GD 225
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
L KA E+ M ++ G + L N + G G ++ +KM ++ V SW +
Sbjct: 226 LV-KATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNV-----VSWTTM- 278
Query: 653 NKVHTFSV-GDTLHPEK--DRIYAYLEE 677
V+ FS GD PEK + + LEE
Sbjct: 279 --VNGFSQNGD---PEKALETFFCMLEE 301
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/732 (34%), Positives = 401/732 (54%), Gaps = 56/732 (7%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SW 157
Y+ G L R++FD++ + WN+++S Y + + + +LF+ M K VV ++
Sbjct: 414 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 473
Query: 158 NTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
+L +A G +R+ +L+ N N L+AAY + G +E A LF+ +
Sbjct: 474 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 533
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----------------------------- 244
+VVSWNS++ G V G+ IF +M +
Sbjct: 534 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRAL 593
Query: 245 ---------RDEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
+EV + NT++ Y++ L A +F + + +WT+ ++ YV+ G
Sbjct: 594 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLY 653
Query: 295 DEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTM 346
+A +FD M K + + +++ + +D R++ + N+ N +
Sbjct: 654 SDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNAL 713
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I YA+ G + AR +F ++P D +SW +I GY+Q+ ++L LF++M++ + +
Sbjct: 714 INMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQF-KPDD 772
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
VL CA LA+L+ G+++HG +++ G+ + V AL+ MY KCG + A F+
Sbjct: 773 ITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDM 832
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I KD+ISW MIAGY HGFG +A+ F M+ GI+PD+ + IL+ACSH+GL+ +G
Sbjct: 833 IPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEG 892
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
++F SM + GV P +HY C+VDLL R G L +A +++MP +PD WG LL CR
Sbjct: 893 WKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCR 952
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++ +LAEK AE IFE+EP+N YV+L+N+YA + +W +V K+R +M+ RG K+ G
Sbjct: 953 IHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGC 1012
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHM 706
SW+EV K + F G++ HP+ RI L +L +++ + + + VL + + EKE +
Sbjct: 1013 SWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMI 1072
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
HSEK A+A+GIL++P GR +RV KN RVC DCH K +SK R I+LRD+NRFHH
Sbjct: 1073 QCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHH 1132
Query: 767 FSGGSCSCGDYW 778
F G CSC D +
Sbjct: 1133 FKDGLCSCRDAF 1144
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 214/450 (47%), Gaps = 33/450 (7%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEV--VSWNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
N + + + G + A L ++E+ S+ S++ ++K L D K + +
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNG 399
Query: 246 ---DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
DE ++ Y L + +++F++ VF W ++S Y + G E+ +F
Sbjct: 400 ISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFK 459
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-------------NVASWNTMITG 349
M +K V N Y T + L + CK N A N++I
Sbjct: 460 KM-QKLGVVGNC----YTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAA 514
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G + A NLFD + + D +SW ++I G +G+S + L +FI+M G ++ +
Sbjct: 515 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTL 574
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
SVL AN+ +L LG+ LHG VK F N LL MY KCG++ A F ++ D
Sbjct: 575 VSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 634
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
++SW + IA Y R G DA+ LF+ M++ G++PD T+ I+ AC+ + ++KG +
Sbjct: 635 TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD- 693
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+S G+ N ++++ + G ++EA+ + +P + D +W ++G Y
Sbjct: 694 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG---YS 749
Query: 590 KTELAEKAAEVIFEME----PENAGMYVLL 615
+ L +A E+ +M+ P++ M +L
Sbjct: 750 QNSLPNEALELFLDMQKQFKPDDITMACVL 779
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 170/382 (44%), Gaps = 38/382 (9%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPAR 112
GD I W I ++R G A+ +F+ M R + +++ + LD R
Sbjct: 633 GDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 692
Query: 113 QVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
V + + +L N +I+ Y + S+ AR +F +P +D+VSWNTM+ GY+QN
Sbjct: 693 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNS 752
Query: 169 YADAARRIF---DRMLEKNEISWNGLLA-----AYVQNGRIEEACMLFESKANWEVVSWN 220
+ A +F + + ++I+ +L A + GR +L + V+
Sbjct: 753 LPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC- 811
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----K 276
+L+ + K L A+ +FD +P +D +SW MI GY + + EA F E +
Sbjct: 812 ALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEP 871
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMAREL 331
D +++ +++ +G ++E F++M + V + ++ + + A +
Sbjct: 872 DESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKF 931
Query: 332 FEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQH------DCISWAAIIAG-YAQ 383
E+M K + W +++G I H L +++ +H D + ++A YA+
Sbjct: 932 IESMPIKPDTTIWGVLLSGC----RIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAE 987
Query: 384 SGYSEDSLRLFIEMKRYGERLN 405
+ E+ +L M++ G + N
Sbjct: 988 AEKWEEVKKLRKRMQKRGFKQN 1009
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/535 (44%), Positives = 335/535 (62%), Gaps = 29/535 (5%)
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
+A+R F+E P + TAM SG ++N V IF +M + AG V
Sbjct: 142 DARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGS-------AGVVDEAA 194
Query: 325 MDMAREL------------FEAMTCK-----NVASWNTMITGYAQSG--EITHARNLFDR 365
+A A+ K NT+I YA+ G ++ AR LFD
Sbjct: 195 ALVALSASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDM 254
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE--RLNRSPFTSVLSTCANLASLE 423
M D +SW +IA YAQ+G S ++L L+ +M G R N ++VL CA+ +++
Sbjct: 255 M-DRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQ 313
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
GK++H Q+V++G E +VG +++ MY KCG VE A+ AF++I K+++SW+ MIAGY
Sbjct: 314 TGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYG 373
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
HG+G++AL +F M+ G+KP+ IT + +L+ACSH GL+ +G ++ +M ++G+ P
Sbjct: 374 MHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGV 433
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+HY CMVDLLGRAG LDEA L+K M +PDAA WGALL ACR+Y ELA+ AE +FE
Sbjct: 434 EHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFE 493
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDT 663
++ N+G YVLLSN+YA +G W +V ++R+ ++ RG++K GYS +E++ K H F VGD
Sbjct: 494 LDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDK 553
Query: 664 LHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI 723
HP+ IYAYLE+L ++ G+V +T VLHD+ EE+E MLR HSEKLAVA+ +++
Sbjct: 554 SHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNS 613
Query: 724 PAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G I V+KNLRVC DCH AIK I+K+ GR II+RD RFHHF G CSCGDYW
Sbjct: 614 VQGSVIHVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 154/340 (45%), Gaps = 41/340 (12%)
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
ARR FD + N + + + ++N + +F S +V+ S G V +
Sbjct: 143 ARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRS-----MVASGS--AGVVDEAAA 195
Query: 233 GDAKWIFDRMPVRDEVSW-----------------NTMITGYAQN--NYLAEAQRLFEEA 273
A R+P R NT+I YA+ + L A++LF+
Sbjct: 196 LVALSASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM 255
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMI-----AGYVQT 322
+DV +W M++ Y QNG EA ++ M N V+ +A++ AG +QT
Sbjct: 256 D-RDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQT 314
Query: 323 KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+ + ++ NV +++ Y++ G++ A F ++ + +SW+A+IAGY
Sbjct: 315 GK-RIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYG 373
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAGC 441
GY +++L +F +M++ G + N F +VL+ C++ L G+ + + + G E G
Sbjct: 374 MHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGV 433
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIA 480
++ + + G ++EAY +E+ V D W +++
Sbjct: 434 EHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLS 473
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 154/372 (41%), Gaps = 85/372 (22%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM--------------------- 149
AR+ FD++P + V M SG +RN + ++F M
Sbjct: 143 ARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSAS 202
Query: 150 ---PKRDVVSW-----------------NTMLSGYAQNGYAD--AARRIFDRMLEKNEIS 187
P R + NT++ YA+ G D AAR++FD M++++ +S
Sbjct: 203 ARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVS 261
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
WN ++A Y QNG EA L+ S ++GG V+ +
Sbjct: 262 WNTMIALYAQNGLSTEALGLY---------SKMLIVGGDVRC----------------NA 296
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
V+ + ++ A + +R+ + +V+ T++V Y + GKV+ A F
Sbjct: 297 VTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQK 356
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHA 359
+ KN +SW+AMIAGY A +F M N ++ T++ + +G ++
Sbjct: 357 IKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEG 416
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
R ++ M I + ++ ++G +++ L EMK + + + + ++LS
Sbjct: 417 RYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMK---VKPDAALWGALLS 473
Query: 415 TCANLASLELGK 426
C ++EL K
Sbjct: 474 ACRIYKNVELAK 485
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 96 NAMISGYLLNG--QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM---- 149
N +I Y G L AR++FD M RD+VSWN MI+ Y +N + A L+ M
Sbjct: 231 NTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVG 289
Query: 150 --PKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEE 203
+ + V+ + +L A G +RI +++ LE N ++ Y + G++E
Sbjct: 290 GDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEM 349
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQ 259
A F+ ++SW++++ G+ +A +F M + +++ T++ +
Sbjct: 350 AWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSH 409
Query: 260 NNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWN 313
L+E + + + V + MV + G +DEA + M K + W
Sbjct: 410 AGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWG 469
Query: 314 AMIAGYVQTKRMDMAR----ELFEAMTCKNVASWNTMITGYAQSG 354
A+++ K +++A+ LFE + N + + YA++G
Sbjct: 470 ALLSACRIYKNVELAKICAERLFE-LDATNSGYYVLLSNIYAEAG 513
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 26/239 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPA 111
D D+ WN I + +NG AL +++ M R ++V+ +A++ G +
Sbjct: 256 DRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTG 315
Query: 112 RQVFDQMPQRDLVSWNV-----MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
+++ +Q+ + L NV ++ Y + + A F+ + ++++SW+ M++GY
Sbjct: 316 KRIHNQVVRMGLED-NVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGM 374
Query: 167 NGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVV 217
+GY A +F M L+ N I++ +LAA G + E M E V
Sbjct: 375 HGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVE 434
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFE 271
+ ++ + L +A + M V+ D W +++ +N LA+ A+RLFE
Sbjct: 435 HYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFE 493
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 274/766 (35%), Positives = 403/766 (52%), Gaps = 95/766 (12%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
R +VSYN++IS L Q + A M L +S + L A +L
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDM----LAEGRHDVSSFTLVSVLLACSHL---- 182
Query: 150 PKRDVVSWNTMLSGYA-QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
P D +A + G+ D R F +N LL+ Y + G +++A LF
Sbjct: 183 PGDDGRRLGREAHAFALKRGFLDEGRERF---------PFNALLSMYARLGLVDDAQSLF 233
Query: 209 ESKA------NWEVVSWNSLMGGFVKQKRLGDA-KWIFD--RMPVR-DEVSWNTMITGYA 258
+ A +VV+WN+++ V+ R +A + ++D + VR D V++ + + +
Sbjct: 234 RTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACS 293
Query: 259 QNNYLAEAQRLFEEAPVKDV------FTWTAMVSGYVQNGKVDEARMIFDAMPE--KNTV 310
+ LA + + +KD F +A+V Y N KV AR +FD +PE +
Sbjct: 294 RLEMLALGREM-HAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLG 352
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG-------------------- 349
WNAMI GY Q + A ELF M + A T ++G
Sbjct: 353 MWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGY 412
Query: 350 -------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
YA+ GE+ AR +F + D +SW +I G G++ ++
Sbjct: 413 VVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEA 472
Query: 391 LRLFIEMK------------RYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVK 434
+L EM+ GE P ++L CA LA+ GK++HG V+
Sbjct: 473 FQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVR 532
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
E+ VG+AL+ MY KCG + + F+ + ++VI+WN +I Y HG G +A+ L
Sbjct: 533 HALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVAL 592
Query: 495 FESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
F+ M G P+++T + L+ACSH+GLV++G E F+ M RD+GV P + C+VD+L
Sbjct: 593 FDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVL 652
Query: 554 GRAGRLDEAQNLMKNM-PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
GRAGRLDEA +++ +M P E + W +LLGACRL+ EL E AAE +FE+EP A Y
Sbjct: 653 GRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHY 712
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLL N+Y+A+G W VR++MR +GV K G SW+E+ +H F G++ HP ++
Sbjct: 713 VLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVH 772
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
A+++ L +++++G+ T VLHDV E+EK MLRYHSEKLA+A+G+L P G IRV
Sbjct: 773 AHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVA 832
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLRVC DCH A K +SK+VGR I+LRD RFHHF GSCSCGDYW
Sbjct: 833 KNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 185/455 (40%), Gaps = 87/455 (19%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPAR 112
G D+ WN I+ ++ G C A+ V M R V++ + + L R
Sbjct: 243 GGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGR 302
Query: 113 QVFD-QMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPK--RDVVSWNTMLSGYA 165
++ + DL + + ++ Y N+ +++AR +F+M+P+ R + WN M+ GYA
Sbjct: 303 EMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYA 362
Query: 166 QNGYADAARRIFDRM-----LEKNEISWNGLLAAYVQN----GRIEEACMLFESKANWEV 216
Q G + A +F RM +E + +G+L A ++ G+ + +
Sbjct: 363 QAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNR 422
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE---- 272
N+LM + + + A+ IF + RD VSWNT+ITG + AEA +L E
Sbjct: 423 FVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLP 482
Query: 273 ------------------------------------APVK---------------DVFTW 281
AP + D+
Sbjct: 483 SPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVG 542
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
+A+V Y + G + +R +FD +P +N ++WN +I Y D A LF+ M A
Sbjct: 543 SALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEA 602
Query: 342 SWN--TMITGYA---QSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSL 391
+ N T I A SG + LF M + + A ++ ++G +++
Sbjct: 603 TPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAY 662
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ M+ GE+ S ++S+L C ++ELG+
Sbjct: 663 SIITSMEP-GEQ-QVSAWSSLLGACRLHRNVELGE 695
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVD--KDVISWNTMIAGYARHGFGKDALMLFESMKT 500
VGNALL Y +CG ++ A F +D +S+N++I+ + AL M
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161
Query: 501 VGIKP-DDITMVGILSACSHT----GLVEKGTEYFYSMNRDYGVIPNSKH---YTCMVDL 552
G T+V +L ACSH G + +++ R G + + + ++ +
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKR--GFLDEGRERFPFNALLSM 219
Query: 553 LGRAGRLDEAQNLMKNM--PFEP---DAATWGALLGACRLYGKTELAEKAAEVIFEM 604
R G +D+AQ+L + F P D TW ++ G+ +A EV+++M
Sbjct: 220 YARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRC---AEAVEVLYDM 273
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 333/537 (62%), Gaps = 4/537 (0%)
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP D VS+ MI+ Y++N L A LF+ MP R +V+ + M+ GYA+ G D+A+++F
Sbjct: 1 MPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVF 60
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
D M++ N SW L++ Y ++G++ +AC LF+ VVSW +++ G+ + + A+
Sbjct: 61 DAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARS 120
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+F++MP ++ +SW M+ Y N EA +LF E P +++++W M+SG + +V+EA
Sbjct: 121 VFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEA 180
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+F MP +N VSW M++G + +ARE F+ M K++A+WN MIT Y I
Sbjct: 181 FKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIV 240
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A LF+ M + + ++W A+I GYA+ ++++ I M R R N + T +L++C
Sbjct: 241 EASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCW 300
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ L Q H + VG E + NAL+ MY + G + + AFE + KDV+SW
Sbjct: 301 GMLEL---MQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTA 357
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
M+ + HG G AL +F M G KPD+IT VG+LSACSH GLV+KG + F SM+R Y
Sbjct: 358 MLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAY 417
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP-FEPDAATWGALLGACRLYGKTELAEK 596
G+ P ++HY+C+VD+LGRAG++ EA +++ MP E D A GALLGACRL+G E+A+
Sbjct: 418 GLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADY 477
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
+ + E++P ++G YVLL+N++AA G W + ++VR KM+DR V+KV G+S +E Q
Sbjct: 478 IGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIEFQQ 534
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/434 (32%), Positives = 232/434 (53%), Gaps = 37/434 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+ IT +++N A +F +MP R+ V+ +AMI GY G +D A++VFD M ++
Sbjct: 9 YTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNV 68
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
SW +ISGY R+ ++ A LF+ MP ++VVSW TM+ GYA+NG D AR +F++M EK
Sbjct: 69 FSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEK 128
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
N ISW ++ +YV NGR +EA LF + SWN+++ G + KR+ +A +F MP
Sbjct: 129 NTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMP 188
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+R+ VSW M++G A+N + A+ F++ P KD+ W AM++ YV + EA +F+
Sbjct: 189 LRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNL 248
Query: 304 MPEKNTVSWNAMIAGYVQTKR--------MDMARELFE----AMTCKNVASW-------- 343
M E+N V+WNAMI GY + + + M R MT + W
Sbjct: 249 MTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLELMQA 308
Query: 344 ----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
N +IT Y++ G+I+ +R F+ + D +SW A++ + G+
Sbjct: 309 HALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHG 368
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNA 446
+ +L +F M + G + + F VLS C++ ++ G++L + + G E +
Sbjct: 369 DHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSC 428
Query: 447 LLVMYCKCGSVEEA 460
L+ + + G V EA
Sbjct: 429 LVDILGRAGQVHEA 442
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 183/356 (51%), Gaps = 14/356 (3%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ W I+ + R+G A +F+ MP ++ VS+ M+ GY NG +D AR VF+Q
Sbjct: 65 DTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQ 124
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP+++ +SW M+ YV N A LF MP+R++ SWNTM+SG + A ++F
Sbjct: 125 MPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLF 184
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
M +N +SW +++ +NG + A F+ N ++ +WN+++ +V + + +A
Sbjct: 185 HLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASE 244
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVS---GYVQ 290
+F+ M R+ V+WN MI GYA++ EA + + + T T +++ G ++
Sbjct: 245 LFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLE 304
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
+ ++ E T NA+I Y + + +R FE++ K+V SW M+ +
Sbjct: 305 LMQAHALAIVVGC--ECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAF 362
Query: 351 AQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YG 401
G HA ++F M + D I++ +++ + +G + +LF M R YG
Sbjct: 363 TYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYG 418
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 283/817 (34%), Positives = 428/817 (52%), Gaps = 94/817 (11%)
Query: 37 SKKTLKRHLNSKSR---NKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR--RS 91
S+ T H S R ++P PA N +T + R G D+AL +F + P R
Sbjct: 64 SRSTRAIHGASLRRALLHRPTPAVS------NALLTAYARCGDLDAALALFAATPPDLRD 117
Query: 92 SVSYNAMISGYLL----NGQLDPARQVFDQMPQRDLVSWNVMIS-GYVRNKSLSAARNLF 146
+VSYN++IS L LD R + +V+++ ++ ++ R
Sbjct: 118 AVSYNSLISALCLFRRWGHALDALRDMLADHEVSSFTLVSVLLACSHLADQGHRLGREAH 177
Query: 147 EMMPK-------RDVVSWNTMLSGYAQNGYADAARRIF--DRMLEKNEISWNGLLAAYVQ 197
K R+ +N +LS YA+ G D A+R+F + ++WN +++ VQ
Sbjct: 178 AFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQ 237
Query: 198 NGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
GR EEA + V V++ S + + + LG + + + D+++ N+
Sbjct: 238 GGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSF 297
Query: 254 ITG-----YAQNNYLAEAQRLFEEAPV--KDVFTWTAMVSGYVQNGKVDE------ARMI 300
+ YA N ++ A+R+F+ P + + W AM+ GY Q+G +DE +RM
Sbjct: 298 VASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRME 357
Query: 301 FDA--MPEKNTVS---------------------------------WNAMIAGYVQTKRM 325
+A P + T++ NA++ Y + RM
Sbjct: 358 AEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRM 417
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
D A +F + +++ SWNT+ITG G I+ A L M S
Sbjct: 418 DEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQ-------------LPSSA 464
Query: 386 YSEDSLRLFIEMKRYGERL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
S +++ + G+R N ++L CA LA+ GK++HG V+ E+ V
Sbjct: 465 ASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAV 524
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG- 502
G+AL+ MY KCG + A F+ + ++VI+WN +I Y HG G +AL LF+ M G
Sbjct: 525 GSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGE 584
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
P+++T + L+ACSH+GLV++G E F M RDYG P + C+VD+LGRAGRLDEA
Sbjct: 585 ATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEA 644
Query: 563 QNLMKNM-PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
++ +M P E + W +LGACRL+ +L AAE +FE+EP+ A YVLL N+Y+A
Sbjct: 645 YGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSA 704
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
+G W + ++VR MR RGV K G SW+E+ +H F G++ HPE +++A+++ L +
Sbjct: 705 AGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWER 764
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
++++G+V T VLHDV E EK MLRYHSEKLA+A+G+L P G IRV KNLRVC DC
Sbjct: 765 MRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDC 824
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H A K IS++VGR I+LRD RFHHF G+CSCGDYW
Sbjct: 825 HEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/551 (40%), Positives = 344/551 (62%), Gaps = 18/551 (3%)
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEA-----QRLFEEAPVKDVFTWTAMVS-----GYVQN 291
MP RD ++W +++T Q N + D F ++A+V G ++
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKL 60
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
GK I + V ++++ Y + + +D A+ +F+++ KN SW M++GYA
Sbjct: 61 GKQVHCHFIVSEYSNDDVVK-SSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYA 119
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER---LNRSP 408
+SG A LF R+P + SW A+I+G+ QSG ++ +F EM+R ER L+
Sbjct: 120 KSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRR--ERVDILDPLV 177
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+S++ CANLA+ G+Q+HG ++ +GF++ F+ NAL+ MY KC V A F +
Sbjct: 178 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 237
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+DV+SW ++I G A+HG + AL L++ M + G+KP+++T VG++ ACSH G V KG E
Sbjct: 238 HRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRE 297
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
F SM +DYG+ P+ +HYTC++DLLGR+G LDEA+NL+ MPF PD TW ALL AC+
Sbjct: 298 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 357
Query: 589 GKTELAEKAAE-VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
G+ ++ + A+ ++ +P++ Y+LLSN+YA++ WG VS+ R K+ D V+K GYS
Sbjct: 358 GQGQMGVRIADHLVSSFKPKDPSTYILLSNIYASASLWGKVSEARRKLGDMEVRKDPGYS 417
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK-QDGFVYSTKLVLHDVGEEEKEHM 706
+EV+ + F G+T H K+ I+ L++LE +++ ++G+V T +LHD+ E+EKE +
Sbjct: 418 SVEVRKETEVFYAGETSHALKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 477
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
L +HSE+ AVAYG+L G PIR++KNLRVC DCH +KHIS+I R II+RD R+HH
Sbjct: 478 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 537
Query: 767 FSGGSCSCGDY 777
F GG CSC D+
Sbjct: 538 FKGGKCSCNDF 548
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 186/387 (48%), Gaps = 21/387 (5%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAA-----RRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
MP RD ++W ++L+ Q + L ++ ++ L+ A G I+
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKL 60
Query: 204 A----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
C S+ + + V +SL+ + K + L AK +FD + V++ +SW M++GYA+
Sbjct: 61 GKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAK 120
Query: 260 NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+ EA LF PVK++++WTA++SG+VQ+GK EA +F M + + ++
Sbjct: 121 SGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 180
Query: 320 VQTKRMDMA-----RELFEAMTCKNVASW----NTMITGYAQSGEITHARNLFDRMPQHD 370
+ ++A R++ + S N +I YA+ ++ A+++F RM D
Sbjct: 181 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 240
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+SW ++I G AQ G +E +L L+ EM +G + N F ++ C+++ + G++L
Sbjct: 241 VVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQ 300
Query: 431 QLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFG 488
+ K G LL + + G ++EA + + D +W +++ R G G
Sbjct: 301 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQG 360
Query: 489 KDALMLFESMKTVGIKPDDITMVGILS 515
+ + + + + + KP D + +LS
Sbjct: 361 QMGVRIADHLVS-SFKPKDPSTYILLS 386
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 42/327 (12%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H S V ++++ Y LD A+ VFD + ++ +SW M+SGY ++
Sbjct: 67 HFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 126
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
A LF +P +++ SW ++SG+ Q+G A +F M + + L+ + +
Sbjct: 127 ALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 186
Query: 202 EEACMLFESKANWEVVSW---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
A + + + V++ N+L+ + K + AK IF RM RD VSW +
Sbjct: 187 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 246
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
+I G AQ+ +A L++E MVS V+ N V++
Sbjct: 247 LIVGMAQHGQAEKALALYDE-----------MVSHGVK----------------PNEVTF 279
Query: 313 NAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMP 367
+I + RELF++MT ++ + ++ +SG + A NL MP
Sbjct: 280 VGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 339
Query: 368 -QHDCISWAAIIAGYAQSGYSEDSLRL 393
D +WAA+++ + G + +R+
Sbjct: 340 FPPDEPTWAALLSACKRQGQGQMGVRI 366
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 166/357 (46%), Gaps = 37/357 (10%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN- 136
D A VF+S+ ++++S+ AM+SGY +G+ + A ++F ++P ++L SW +ISG+V++
Sbjct: 94 DCAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSG 153
Query: 137 KSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW---- 188
K L A EM +R D + ++++ A + A R++ ++ S
Sbjct: 154 KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFIS 213
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR--- 245
N L+ Y + + A +F + +VVSW SL+ G + + A ++D M
Sbjct: 214 NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVK 273
Query: 246 -DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD------VFTWTAMVSGYVQNGKVDEAR 298
+EV++ +I + ++A+ + LF+ KD + +T ++ ++G +DEA
Sbjct: 274 PNEVTFVGLIYACSHVGFVAKGRELFQSM-TKDYGIRPSLQHYTCLLDLLGRSGLLDEAE 332
Query: 299 MIFDAMP-EKNTVSWNAMIAGYVQTKRMDM----ARELFEAMTCKNVASWNTMITGYAQS 353
+ MP + +W A+++ + + M A L + K+ +++ + YA +
Sbjct: 333 NLIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILLSNIYASA 392
Query: 354 ---GEITHARNLFDRMPQHDCISWAAI---------IAGYAQSGYSEDSLRLFIEMK 398
G+++ AR M ++++ AG ED RL +++
Sbjct: 393 SLWGKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGETSHALKEDIFRLLKKLE 449
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 59/293 (20%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W ++ + ++G + AL +F +P ++ S+ A+ISG++ +G+ A VF +M +R+
Sbjct: 111 WTAMVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEM-RRER 169
Query: 124 VSW-----------------------------------------NVMISGYVRNKSLSAA 142
V N +I Y + + AA
Sbjct: 170 VDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAA 229
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQN 198
+++F M RDVVSW +++ G AQ+G A+ A ++D M ++ NE+++ GL+ A
Sbjct: 230 KDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHV 289
Query: 199 GRIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNT 252
G + + LF+S + + L+ + L +A+ + MP DE +W
Sbjct: 290 GFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAA 349
Query: 253 MITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQN---GKVDEAR 298
+++ + + A L KD T+ + + Y GKV EAR
Sbjct: 350 LLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILLSNIYASASLWGKVSEAR 402
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/697 (36%), Positives = 382/697 (54%), Gaps = 49/697 (7%)
Query: 100 SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+G L G+ AR V N +I+ Y + +A LF+ MP+ ++VSW T
Sbjct: 30 AGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTT 89
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWN--------GLLAAYVQNGRIEEACMLFESK 211
++SG QN A F M + A ++ + C+
Sbjct: 90 LVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLG 149
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+ E+ ++L + K L +A +FD+MP +D V+W MI GYA+N L A F
Sbjct: 150 FDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFR 209
Query: 272 E-------APVKDVFTWTAMVSGYVQNGKVDEA--RMIFDAMPEKNTVSWNAMIAGYVQT 322
+ + V SG +++G + A + + E+ NA+ Y +
Sbjct: 210 DMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKA 269
Query: 323 KRMDMARELFEA-MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
MD A + + NV S ++I GY ++ DCI
Sbjct: 270 ADMDNAARVVKIDQGSLNVVSATSLIDGYIET----------------DCI--------- 304
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
E +L +FIE++R G N F+S++ CA A LE G QLH +++K +
Sbjct: 305 ------EKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDS 358
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
FV + LL MY KCG + + F+EI I+WN I A+HG G++A+ F+ M +
Sbjct: 359 FVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSS 418
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
GI+P+ IT V +L+ACSH GLV++G +YFYSM +G+ P +HY+C++D+ GRAGRLDE
Sbjct: 419 GIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDE 478
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A+ + MP +P+A W +LLGACR+ G EL E AA+ + ++EP+N G++V LS +YA+
Sbjct: 479 AEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYAS 538
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
G+W DV VR MRD +KK+ G+SW++ K H F D HP++++IY LEEL +
Sbjct: 539 LGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYER 598
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
+K++G+V T+ + ++ + K+ +LRYHSE++AVA+ ++S+PA +PI V KNLR+C DC
Sbjct: 599 IKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADC 658
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H+A+K ISK+ R II+RDN+RFHHF G CSCGDYW
Sbjct: 659 HSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 197/469 (42%), Gaps = 59/469 (12%)
Query: 72 MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMIS 131
+R G C A V + S+ N +I+ Y + A ++FD MP+ +LVSW ++S
Sbjct: 33 LRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVS 92
Query: 132 GYVRNKSLSAARNLFEMMPKRDVVSW---------------------------------- 157
G +N A F M + +V
Sbjct: 93 GLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDA 152
Query: 158 -----NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-- 210
+ + Y+++G A R+FD+M +K+ ++W ++ Y +NG +E A + F
Sbjct: 153 ELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMR 212
Query: 211 -----KANWEVVSWNSLMGGFVKQKRLGDA-KWIFDRMPVRDEVSWNTMITG-YAQNNYL 263
A+ V+ G +K L A + EV+ +T YA+ +
Sbjct: 213 REGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADM 272
Query: 264 AEAQRLFE-EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAG 318
A R+ + + +V + T+++ GY++ +++A ++F + E N ++++MI G
Sbjct: 273 DNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKG 332
Query: 319 YVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++ +L + ++ S +T++ Y + G I+ + LF + H I+W
Sbjct: 333 CAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAW 392
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLV 433
A I AQ G+ +++R F M G R N F S+L+ C++ ++ G K +
Sbjct: 393 NAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKD 452
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
G E + ++ MY + G ++EA E+ V + W +++
Sbjct: 453 HHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGA 501
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 164/381 (43%), Gaps = 43/381 (11%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
++G A VF+ MP++ +V++ AMI GY NG L+ A F M + LV +
Sbjct: 166 KSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGAD----Q 221
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
+V LSA+ L + R + S M SG+ Q + A R N L
Sbjct: 222 HVLCSVLSASGGLKDGWLARAIHSC-VMKSGFEQ----EVAVR-------------NALT 263
Query: 193 AAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DE 247
Y + ++ A + + + + VVS SL+ G+++ + A +F + + +E
Sbjct: 264 DMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNE 323
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
++++MI G A L + +L E + + D F + ++ Y + G + + +F
Sbjct: 324 FTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKE 383
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHA 359
+ ++WNA I Q A F+ MT + ++ +++T + +G +
Sbjct: 384 IEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEG 443
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
F M H I ++ II Y ++G +++ + EM + N + S+L
Sbjct: 444 LKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMP---VKPNAYGWCSLLG 500
Query: 415 TCANLASLELGKQLHGQLVKV 435
C + ELG+ ++K+
Sbjct: 501 ACRMRGNKELGEIAADNMMKL 521
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 9/215 (4%)
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
L +C L LG+ LH +LV G A F+ N L+ MY C V A F+ + +
Sbjct: 24 LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
++SW T+++G ++ +DAL F SM G+ P + A + G + +
Sbjct: 84 LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQ-LH 142
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
+ G + + D+ ++G L EA + MP + DA W A++ Y K
Sbjct: 143 CVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMP-QKDAVAWTAMIDG---YAKN 198
Query: 592 ELAEKAAEVIFEMEPE---NAGMYVLLSNLYAASG 623
E A +M E A +VL S L A+ G
Sbjct: 199 GNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGG 233
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 149/363 (41%), Gaps = 35/363 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMI-------SGYLLNGQLDPAR 112
D W I + +NG ++A+ F M R V + + SG L +G L A
Sbjct: 184 DAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAI 243
Query: 113 Q--VFDQMPQRDLVSWNVMISGYVRNKSL-SAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
V ++++ N + Y + + +AAR + +VVS +++ GY +
Sbjct: 244 HSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDC 303
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS----WNS 221
+ A +F + +E NE +++ ++ +E+ L ++S ++
Sbjct: 304 IEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSST 363
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--- 278
L+ + K + + +F + +++WN I AQ+ + EA R F+ +
Sbjct: 364 LLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPN 423
Query: 279 -FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
T+ ++++ G VDE F +M + + + ++ +I Y + R+D A +
Sbjct: 424 HITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFI 483
Query: 333 EAMTCK-NVASWNTMI-----TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
M K N W +++ G + GEI A N+ P + + ++ YA G
Sbjct: 484 GEMPVKPNAYGWCSLLGACRMRGNKELGEIA-ADNMMKLEPDNTGVH-VSLSGIYASLGQ 541
Query: 387 SED 389
ED
Sbjct: 542 WED 544
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/572 (41%), Positives = 364/572 (63%), Gaps = 22/572 (3%)
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
M G +KQ +L + + D V N+++ YA+ L A+++F+E VKDV TWT
Sbjct: 103 MLGKLKQGKLVHTHLMNSKFR-NDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWT 161
Query: 283 AMVSGYVQNGKVDEA--------RMIFDAM-PEKNTVSWNAMIAGY----VQTKRMDMA- 328
+M++GY Q+G A M+ D + P + +S G+ V K++
Sbjct: 162 SMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCC 221
Query: 329 -RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ F+ +NV ++++ YA+ GE+ +R +FD + + +SW A+I+G+A+ G
Sbjct: 222 WKYGFQ----ENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEG 277
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
E++L LF++M+R G ++++L + + SLE GK LH ++K G + +VGN L
Sbjct: 278 EEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTL 337
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPD 506
L MY K G++ +A F+ +V DV+S N+M+ GYA+HG GK+A+ LFE M V I+P+
Sbjct: 338 LHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPN 397
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
DIT + +L+ACSH GL+++G Y++ + + YG+ P HYT +VDL GRAG LD+A++ +
Sbjct: 398 DITFLSVLTACSHAGLLDEGL-YYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFI 456
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+ MP EP+A WGALLGA +++ TE+ AA+ + E++P G + LLSN+YA++G+W
Sbjct: 457 EEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWK 516
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DV+KVR +M+D G+KK SW+E++N VH FS D HP+K+++Y E L K+K+ G
Sbjct: 517 DVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIG 576
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T V V ++EKE L+YHSEKLA+A+ +L+ G IR+MKN+RVC DCH+AIK
Sbjct: 577 YVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIK 636
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S +V R II+RD NRFHHF GSCSC DYW
Sbjct: 637 YVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 166/323 (51%), Gaps = 23/323 (7%)
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
+ NG ++ R I++ + ++ T+ V T M+ ++ N+++
Sbjct: 82 INNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFR-------NDLVIKNSILF 134
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS---LRLFIEMKRYGERLN 405
YA+ G + AR +FD M D ++W ++I GY+Q GY+ + L LF+EM R G R N
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPN 194
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+S++ C L S GKQ+HG K GF+ FVG++L+ MY +CG + E+ F+
Sbjct: 195 EFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFD 254
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
E+ K+ +SWN +I+G+AR G G++AL LF M+ G + T +L + S TG +E+
Sbjct: 255 ELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQ 314
Query: 526 G----TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
G S + G + N+ ++ + ++G + +A+ + + + D + ++
Sbjct: 315 GKWLHAHMMKSGKKLVGYVGNT-----LLHMYAKSGNICDAKKVFDRL-VKVDVVSCNSM 368
Query: 582 LGACRLYGKTELAEKAAEVIFEM 604
L Y + L ++A E+ EM
Sbjct: 369 LIG---YAQHGLGKEAVELFEEM 388
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 244/531 (45%), Gaps = 75/531 (14%)
Query: 90 RSSVSYNAMISGYLL----NGQLDPARQVFDQMPQR------------------------ 121
R S++ N+ ++L NG L+P R +++++ +R
Sbjct: 65 RPSLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRN 124
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
DLV N ++ Y + SL AR +F+ M +DVV+W +M++GY+Q+GYA +A L
Sbjct: 125 DLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFL 184
Query: 182 E-------KNEISWN------GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
E NE + + G L + V +I C + + N V +SL+ + +
Sbjct: 185 EMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQEN--VFVGSSLVDMYAR 242
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAM 284
L +++ +FD + ++EVSWN +I+G+A+ EA LF E FT++A+
Sbjct: 243 CGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSAL 302
Query: 285 VSGYVQNGKVDEARMIFDAMPE--KNTVSW--NAMIAGYVQTKRMDMARELFEAMTCKNV 340
+ G +++ + + M + K V + N ++ Y ++ + A+++F+ + +V
Sbjct: 303 LCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDV 362
Query: 341 ASWNTMITGYAQSGEITHARNLFDRM-----PQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
S N+M+ GYAQ G A LF+ M + + I++ +++ + +G ++ L F
Sbjct: 363 VSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFE 422
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
MK+YG S +T+V+ L+ K + ++ E + ALL
Sbjct: 423 LMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSF---IEEMPIEPNATIWGALLGASKMHK 479
Query: 456 SVEEAYHAFEEIVDKDVI--SWNTMIAG-YARHGFGKDALMLFESMKTVGIKPDDI---- 508
+ E +A +++++ D +T+++ YA G KD + + MK G+K +
Sbjct: 480 NTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWV 539
Query: 509 ---TMVGILSA--CSHTGLVEKGTEYFYSMN---RDYGVIPNSKHYTCMVD 551
V I SA SH K E + ++N ++ G +P++ H VD
Sbjct: 540 EIENSVHIFSANDISHPQ-KNKVYEMWENLNQKIKEIGYVPDTSHVHVFVD 589
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 158/370 (42%), Gaps = 69/370 (18%)
Query: 39 KTLKRHL-NSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNA 97
K + HL NSK RN D+ N + + + G + A VF+ M + V++ +
Sbjct: 111 KLVHTHLMNSKFRN--------DLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTS 162
Query: 98 MISGYLLNGQLDPARQ---VFDQMP----------------------------------- 119
MI+GY +G A +F +M
Sbjct: 163 MITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCW 222
Query: 120 ----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
Q ++ + ++ Y R L +R +F+ + ++ VSWN ++SG+A+ G + A
Sbjct: 223 KYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALG 282
Query: 176 IFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFES--KANWEVVSW--NSLMGGFV 227
+F +M + E +++ LL + G +E+ L K+ ++V + N+L+ +
Sbjct: 283 LFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYA 342
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWT 282
K + DAK +FDR+ D VS N+M+ GYAQ+ EA LFEE + + T+
Sbjct: 343 KSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFL 402
Query: 283 AMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
++++ G +DE F+ M E + ++ + + +D A+ E M +
Sbjct: 403 SVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIE 462
Query: 339 -NVASWNTMI 347
N W ++
Sbjct: 463 PNATIWGALL 472
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/665 (36%), Positives = 381/665 (57%), Gaps = 36/665 (5%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN---------------EI 186
AR LF+ +P+ D + +T++S +G ++ A +I+ + E+ +
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 90
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
S + L V + M +V N+L+ + K K + A+ +FD + VRD
Sbjct: 91 SGDALRVKEVHDDATRCGVM-------SDVFVGNALIHAYGKCKCVEGARRVFDDLVVRD 143
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV---------QNGKVDEA 297
VSW ++ + Y + + + +F E V VS + ++GK
Sbjct: 144 VVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHG 203
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ M N +A+++ Y + + AR +F+ M ++V SWN ++T Y ++ E
Sbjct: 204 FAVRHGM-VVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYE 262
Query: 358 HARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
+LF +M + D +W A+I G ++G SE+++ +F +M++ G + N +S+L
Sbjct: 263 KGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSIL 322
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
C+ +L +GK++H + + ALL MY KCG + + + F+ + KDV+
Sbjct: 323 PACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVV 382
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
+WNTMI A HG GK+AL LF+ M ++P+ +T G+LS CSH+ LVE+G + F SM
Sbjct: 383 AWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSM 442
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
RD+ V P++ HY+C+VD+ RAGRL+EA ++ MP EP A+ WGALL ACR+Y EL
Sbjct: 443 GRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVEL 502
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
A+ +A+ +FE+EP N G YV L N+ + W + S+VR+ M++RG+ K G SWL+V N
Sbjct: 503 AKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGN 562
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
KVHTF VGD + E D+IY +L+EL K+K G+ T VL D+ +EEK L HSEK
Sbjct: 563 KVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEK 622
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LAVA+GIL++ IRV KNLR+C DCHNAIK++SK+VG +I++RD+ RFHHF G+CS
Sbjct: 623 LAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCS 682
Query: 774 CGDYW 778
C D W
Sbjct: 683 CKDLW 687
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 213/453 (47%), Gaps = 49/453 (10%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVS----YNAMISGYLLNGQLDPARQVFDQMPQ-- 120
A+TTH G + A+ +++S+ R + A ++G ++V D +
Sbjct: 52 ALTTH---GLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCG 108
Query: 121 --RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
D+ N +I Y + K + AR +F+ + RDVVSW ++ S Y + G+ +F
Sbjct: 109 VMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVF- 167
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACM-LFESKANWEVVSW-------------NSLMG 224
E+ W+G+ + I AC L + K+ E+ + ++L+
Sbjct: 168 -----REMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVS 222
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFT 280
+ K + +A+ +FD MP RD VSWN ++T Y +N + LF + D T
Sbjct: 223 LYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEAT 282
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAREL----F 332
W A++ G ++NG+ +EA +F M + N ++ ++++ ++ + M +E+ F
Sbjct: 283 WNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVF 342
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
++ S ++ YA+ G++ +RN+FD M + D ++W +I A G +++L
Sbjct: 343 RHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALF 402
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK---VGFEAGCFVGNALLV 449
LF +M + N FT VLS C++ +E G Q+ + + V +A + + ++
Sbjct: 403 LFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY--SCVVD 460
Query: 450 MYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
+Y + G + EAY + + ++ +W ++A
Sbjct: 461 IYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 5/251 (1%)
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G+ AR LFD +PQ D + + +I+ G S ++++++ ++ G + + F +
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
CA K++H + G + FVGNAL+ Y KC VE A F+++V +DV+
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SW ++ + Y + GF + + +F M G+KP+ +T+ IL AC+ ++ G E +
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE-IHGF 204
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+G++ N + +V L + + EA+ + MP D +W +L A Y K +
Sbjct: 205 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTA---YFKNKE 260
Query: 594 AEKAAEVIFEM 604
EK + +M
Sbjct: 261 YEKGFSLFLKM 271
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 22/237 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQ-- 113
D WN I M NG + A+ +F M + + ++ ++++ + L ++
Sbjct: 279 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 338
Query: 114 --VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
VF DL S ++ Y + L+ +RN+F+MM ++DVV+WNTM+ A +G
Sbjct: 339 CYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGK 398
Query: 172 AARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-----WNSL 222
A +FD+ML + N +++ G+L+ + +EE +F S +V ++ +
Sbjct: 399 EALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCV 458
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEAP 274
+ + + RL +A MP+ S W ++ +N LA+ A++LFE P
Sbjct: 459 VDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEP 515
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+G L+ + G A F+ I D + +T+I+ HG +A+ ++ S++ G
Sbjct: 14 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
IKPD + AC+ +G + E R GV+ + ++ G+ ++ A
Sbjct: 74 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATR-CGVMSDVFVGNALIHAYGKCKCVEGA 132
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ + ++ D +W + L +C Y K K +V EM
Sbjct: 133 RRVFDDLVVR-DVVSWTS-LSSC--YVKCGFPRKGMDVFREM 170
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/721 (33%), Positives = 374/721 (51%), Gaps = 84/721 (11%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAY-VQNGR 200
AR LF +PK D+ +N ++ G++ N ++ ++ + +S + A+ V
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122
Query: 201 IEEACMLFESKANWEVVSWNSLMGG-----FVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
++ ML + + + N +G + K R+ A+ +FD MP RD V WNTMI
Sbjct: 123 NDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMIN 182
Query: 256 GYAQNNYLAEAQRLFEEAPVKDV------------------------------------- 278
G +N ++ +LF E V
Sbjct: 183 GLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGF 242
Query: 279 --FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ T ++S Y + G V+ AR++F + + +++NAMI+G+ + + +LF +
Sbjct: 243 CDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELL 302
Query: 337 CKNVASWNTMITG---------------------------------------YAQSGEIT 357
++ I G Y + EI
Sbjct: 303 FSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEID 362
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR+LFD P+ ++W A+I+GY Q+G +E ++ LF EM + N T++LS CA
Sbjct: 363 LARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACA 422
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L SL GK +H + E +V AL+ MY KCG++ EA+ F+ + +K+ ++WNT
Sbjct: 423 QLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNT 482
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI GY HG+G +AL L+ M +G P +T + +L ACSH GLV +G E F++M Y
Sbjct: 483 MIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKY 542
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ P +HY CMVD+LGR+G+L++A +K MP EP A WG LLGAC ++ T++A A
Sbjct: 543 RIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLA 602
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
+E +FE++P + G YVLLSN+Y+ + + +R ++ R + K G + +EV H
Sbjct: 603 SERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHV 662
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F GD H IYA LE+L K+++ G+ T LHDV EEEKE + HSEKLA+A
Sbjct: 663 FVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIA 722
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G+++ G IR++KNLRVC DCH A K ISKI R+I++RD NRFHHF G CSCGDY
Sbjct: 723 FGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDY 782
Query: 778 W 778
W
Sbjct: 783 W 783
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 194/484 (40%), Gaps = 98/484 (20%)
Query: 43 RHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY 102
RH + + PKP DI +NV + N S++ ++ + R +++S + +
Sbjct: 61 RHARALFFSVPKP----DIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAF 116
Query: 103 LLNG-------QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+ L A + D V + ++ Y + + AR +F+ MP+RD V
Sbjct: 117 AVAACSNDKHLMLLHAHSIIDGYGSNVFVG-SALVDLYCKFSRVVYARKVFDGMPERDTV 175
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM------LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
WNTM++G +N D + ++F M ++ + ++ AA +Q ++
Sbjct: 176 LWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLA 235
Query: 210 SKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
K + + L+ + K + A+ +F R+ D +++N MI+G+ N +
Sbjct: 236 LKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSV 295
Query: 268 RLFEE----------------APVKDVF-----------------------TWTAMVSGY 288
+LF E P+ F TA + Y
Sbjct: 296 KLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIY 355
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------- 335
+ ++D AR +FD PEK V+WNAMI+GY Q + A LF+ M
Sbjct: 356 NKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTIT 415
Query: 336 ----TCKNVASWN----------------------TMITGYAQSGEITHARNLFDRMPQH 369
C + S + ++ YA+ G I+ A LFD M +
Sbjct: 416 TILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK 475
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ ++W +I GY GY ++L+L+ EM G + F SVL C++ + G+++
Sbjct: 476 NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF 535
Query: 430 GQLV 433
+V
Sbjct: 536 HNMV 539
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 26/251 (10%)
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD----VVSWNTMLS 162
++D AR +FD+ P++ +V+WN MISGY +N S A +LF+ M K + V+ T+LS
Sbjct: 360 EIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILS 419
Query: 163 GYAQNGYADAAR----RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
AQ G + I LE N L+ Y + G I EA LF+S + V+
Sbjct: 420 ACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVT 479
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
WN+++ G+ +A +++ M P V++ +++ + + E + +F
Sbjct: 480 WNTMIFGYGLHGYGHEALKLYNEMLHLGYNP--SAVTFLSVLYACSHAGLVGEGEEIFHN 537
Query: 273 APVKD-----VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMD 326
K + + MV ++G++++A MP E W ++ + K D
Sbjct: 538 MVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTD 597
Query: 327 MAR----ELFE 333
+AR LFE
Sbjct: 598 IARLASERLFE 608
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/798 (33%), Positives = 413/798 (51%), Gaps = 125/798 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+ I + +NG A VF + R +VS+ AM+SGY NG + A ++ QM + +V
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 125 SW---------------------------------------NVMISGYVRNKSLSAARNL 145
N +I+ Y+R S A +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F MP RD V++NT++SG+AQ G+ + A IF+ M L + ++ + LLAA G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 202 EEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
++ L F++ + + + SL+ +VK + A IF+ + V WN M+ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 258 AQNNYLAEAQRLF----------------------------------EEAPVKDVFTWTA 283
Q N LA++ LF VK F
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 284 MVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-- 336
VSG Y + G +++AR + + + EK+ VSW +MIAGYVQ + A F+ M
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 337 ---------------CK----------------------NVASWNTMITGYAQSGEITHA 359
C +V+ WN ++ YA+ G I A
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+ F+ M D I+ +++G+AQSG E++L++F+ M + G + N F S LS ANL
Sbjct: 501 FSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A ++ GKQ+H +++K G VGNAL+ +Y KCGS E+A F E+ +++ +SWNT+I
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
++HG G +AL LF+ MK GIKP+D+T +G+L+ACSH GLVE+G YF SM+ +YG+
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P HY C++D+ GRAG+LD A+ ++ MP DA W LL AC+++ E+ E AA+
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAK 740
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP ++ YVLLSN YA + +W + +VR MRDRGV+K G SW+EV+N VH F
Sbjct: 741 HLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFF 800
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD LHP ++IY +L + ++ + G+ + HD +E ++ HSEKLAV +G
Sbjct: 801 VGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFG 860
Query: 720 ILSIPAGRPIRVMKNLRV 737
++S+P P+RV+KNLRV
Sbjct: 861 LMSLPPCMPLRVIKNLRV 878
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 229/493 (46%), Gaps = 54/493 (10%)
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
R L K I N L+ Y +NG + A +FE + + VSW +++ G+ + +A +
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 239 FDRM----PVRDEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQ 290
+ +M V +++++ + A+ + + ++ ++F A+++ Y++
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------CKNVASW 343
G A +F MP ++TV++N +I+G+ Q + A E+FE M C ++S
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 344 --------------------------------NTMITGYAQSGEITHARNLFDRMPQHDC 371
+++ Y + G++ A +F+ + +
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ W ++ + Q S LF +M+ G R N+ + +L TC ++LG+Q+H
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
VK GFE+ +V L+ MY K G +E+A E + +KDV+SW +MIAGY +H KDA
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L F+ M+ GI PD+I + +S C+ + +G + ++ G + + +V+
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVN 489
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA-- 609
L R GR+ EA + + M + D T L+ + ++ L E+A +V M+
Sbjct: 490 LYARCGRIREAFSSFEEMELK-DGITGNGLVSG---FAQSGLHEEALKVFMRMDQSGVKH 545
Query: 610 GMYVLLSNLYAAS 622
++ +S L A++
Sbjct: 546 NVFTFVSALSASA 558
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 167/366 (45%), Gaps = 33/366 (9%)
Query: 48 KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMISGYL 103
K+R + + D+ W I ++++ CC AL F M + ++ + ISG
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457
Query: 104 ----LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+ L +++ D+ WN +++ Y R + A + FE M +D ++ N
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNG 517
Query: 160 MLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESK 211
++SG+AQ+G + A ++F RM ++ N ++ L+A I++ + ++
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
++E N+L+ + K DAK F M R+EVSWNT+IT +Q+ EA LF+
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFD 637
Query: 272 EAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQT 322
+ + + T+ +++ G V+E F +M ++ + + +I + +
Sbjct: 638 QMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRA 697
Query: 323 KRMDMARELFEAM-TCKNVASWNTMITGYA-----QSGEITHARNLFDRMPQHDCISWAA 376
++D A++ E M + W T+++ + GE A++L + P HD S+
Sbjct: 698 GQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFA-AKHLLELEP-HDSASYVL 755
Query: 377 IIAGYA 382
+ YA
Sbjct: 756 LSNAYA 761
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 7/267 (2%)
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-ANLASLEL 424
M + S +AG+ L LF + R L F L C N ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
++H + V G VGN L+ +Y K G V A FEE+ +D +SW M++GYA+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
+G G++AL L+ M G+ P + +LS+C+ L +G ++ +G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
++ L R G A+ + +MP D T+ L+ + + E A E+ EM
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG---HAQCGHGEHALEIFEEM 235
Query: 605 EPEN-AGMYVLLSNLYAASGRWGDVSK 630
+ + V +S+L AA GD+ K
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQK 262
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/535 (42%), Positives = 333/535 (62%), Gaps = 10/535 (1%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
++ Y++ +L +A ++F++ VK+V +WT M+ G ++ GK EA +F + E
Sbjct: 145 VVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPD 204
Query: 313 NAMIA---------GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
+I G +++ R + R + E +NV +++ Y + G + AR +F
Sbjct: 205 GFVIVRVLRACARLGDLESGRW-IDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVF 263
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
D M + D + W+A+I GYA +G +++ LF EM++ R + LS+CA+L +LE
Sbjct: 264 DGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALE 323
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
LG G + F + +G +L+ Y KCGS+EEA ++ + +KD + +N +I+G A
Sbjct: 324 LGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLA 383
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+G A +F M GI P++ T VG+L C+H GLV+ G YF SM+ D+ V P
Sbjct: 384 MYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTI 443
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+HY CMVDLL RAG LDEA NL+K MP + + WG+LLG CRL+ +T+LAE + + E
Sbjct: 444 EHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIE 503
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDT 663
+EP N+G YVLLSN+Y+AS RW + K+R + ++G++K+ GYSW+EV VH F VGDT
Sbjct: 504 LEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDT 563
Query: 664 LHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI 723
HP +IY LE L LK+ G+ +T+ VL DV EEEKEH L HSEKLAVA+ ++S
Sbjct: 564 SHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALIST 623
Query: 724 PAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A IRV+KNLRVC DCH AIKHISK+ GR I++RDNNRFH FS G+CSC DYW
Sbjct: 624 GAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 120/249 (48%), Gaps = 6/249 (2%)
Query: 362 LFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+F + P + + + +I G +++ L+ M + + F+ VL CA L
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
LG +H + K GF+ FV ++ Y KCG + +A+ F+++V K+V+SW MI
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G G ++A+ LF + G++PD +V +L AC+ G +E G + R+ G+
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESG-RWIDRCMRECGLS 237
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
N T +VD+ + G ++EA+ + M E D W A++ Y L +A E+
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMIQG---YASNGLPREAIEL 293
Query: 601 IFEMEPENA 609
FEM N
Sbjct: 294 FFEMRKVNV 302
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 158/379 (41%), Gaps = 39/379 (10%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + + G A VF+ M ++ VS+ MI G + G+ A
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAA-------------RNLFEMMPKRDVVSWNTM 160
+F R L+ + G+V + L A R + E R+V ++
Sbjct: 192 LF-----RGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSL 246
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV-VSW 219
+ Y + G + AR +FD M+EK+ + W+ ++ Y NG EA LF V
Sbjct: 247 VDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDC 306
Query: 220 NSLMGGFVKQKRLGD---AKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+++G LG W M + + V ++I YA+ + EA +++
Sbjct: 307 YAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKM 366
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMA 328
KD + A++SG G+V A +F M + N ++ ++ G +D
Sbjct: 367 MKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDG 426
Query: 329 RELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG-- 380
R F +M+ + + M+ A++G + A NL MP + + I W +++ G
Sbjct: 427 RHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCR 486
Query: 381 -YAQSGYSEDSLRLFIEMK 398
+ ++ +E L+ IE++
Sbjct: 487 LHRETQLAEHVLKQLIELE 505
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 163/422 (38%), Gaps = 98/422 (23%)
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML----F 208
+NTM+ G + A ++ M + + +++ +L A + M+ F
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
++ + +V +++ + K L DA +FD M V++ VSW MI G + EA
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 269 LF---------------------------------------EEAPVKDVFTWTAMVSGYV 289
LF E ++VF T++V Y
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYT 251
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV--------- 340
+ G ++EAR +FD M EK+ V W+AMI GY A ELF M NV
Sbjct: 252 KCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVG 311
Query: 341 -------------ASW-----------------NTMITGYAQSGEITHARNLFDRMPQHD 370
+W ++I YA+ G + A ++ M + D
Sbjct: 312 ALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKD 371
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL-- 428
+ + A+I+G A G + +F +M ++G N F +L C + ++ G+
Sbjct: 372 RVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFN 431
Query: 429 ---HGQLVKVGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNTMIAGYA 483
H V E GC V + + G ++EA++ + + K +VI W +++ G
Sbjct: 432 SMSHDFSVTPTIEHYGCMVD-----LLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCR 486
Query: 484 RH 485
H
Sbjct: 487 LH 488
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 119/281 (42%), Gaps = 27/281 (9%)
Query: 89 RRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
R +S N ++ L++ G ++ AR VFD M ++D+V W+ MI GY N A
Sbjct: 232 RECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAI 291
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI---------FDRMLEKNEISWNGLLAA 194
LF M K +V + G + + A + ++ L N + L+
Sbjct: 292 ELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFL-SNPVLGTSLIDF 350
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSW 250
Y + G +EEA +++ + V +N+++ G ++G A +F +M +E ++
Sbjct: 351 YAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTF 410
Query: 251 NTMITGYAQNNYLAEAQRLFEE-----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
++ G + + + F + + + MV + G +DEA + MP
Sbjct: 411 VGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMP 470
Query: 306 EK-NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
K N + W +++ G + +A + + + + WN+
Sbjct: 471 MKANVIVWGSLLGGCRLHRETQLAEHVLKQLI--ELEPWNS 509
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 14/168 (8%)
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ + +NTMI G +A+ L+ SM I PD T +L AC+ L G
Sbjct: 66 NSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGV- 124
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+S+ G + T +V + G L +A + +M + + +W ++ C +
Sbjct: 125 MIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVK-NVVSWTGMICGCIEF 183
Query: 589 GKTELAEKAAEVIFE--MEPENAGMYVLLSNLYAA-------SGRWGD 627
GK A + E + P+ +V++ L A SGRW D
Sbjct: 184 GKFREAVDLFRGLLESGLRPDG---FVIVRVLRACARLGDLESGRWID 228
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 318/504 (63%), Gaps = 2/504 (0%)
Query: 277 DVFTWTAMVSGYVQN--GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
D+F TA+V Y + G++ AR FD P ++ N M+A YV + AR++F+
Sbjct: 82 DLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDG 141
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
M+ +++ SWNTMI GYA G++ AR +FD D SW+++I+ YA+ S+++L L+
Sbjct: 142 MSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELW 201
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
EM+ G + SVLS C+ + +L +G ++H + E +G AL+ MY KC
Sbjct: 202 REMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKC 261
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G +E + F + KDV++W++MI G A HG G DAL LF M + G++P++IT +G+L
Sbjct: 262 GDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVL 321
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
AC+H GLV G +YF SM+ +GV+P +HY CMVDLLGRAG ++EA L+++M F+PD
Sbjct: 322 IACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPD 381
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
W LLGACR++ E+AE+A + ++P G YVLLSN+YA + W V+++R
Sbjct: 382 PIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKT 441
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
+R +++V G S +E +N VH F GD HP + IY LEE+ +L+Q G+ T LV
Sbjct: 442 IRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLV 501
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
L D+ E+ K+ L HSEKLA+A+G+L PA +R+ KNLR CEDCH+AIK IS R
Sbjct: 502 LQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDR 561
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
+I+RD NRFHHFS G CSC DYW
Sbjct: 562 KLIVRDRNRFHHFSEGQCSCKDYW 585
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 141/298 (47%), Gaps = 28/298 (9%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G++ AR FD+ P+RD+ NVM++ YV ++ AR +F+ M RD+VSWNTM+ GYA
Sbjct: 99 GEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYA 158
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----------ESKANWE 215
G AR IFD +++ SW+ +++AY + +EA L+ + +
Sbjct: 159 VRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVS 218
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIF---DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
V+S S MG +G F +R+ V D ++ YA+ + + ++F
Sbjct: 219 VLSACSAMGALA----IGAEVHRFVESNRVEV-DMKLGTALVDMYAKCGDIENSLKVFHA 273
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMA 328
PVKDV TW++M+ G +G +A +F M + N +++ ++ ++
Sbjct: 274 MPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDG 333
Query: 329 RELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
++ F +M+ + + M+ ++G + A L M + D I W ++
Sbjct: 334 KKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGA 391
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 149/321 (46%), Gaps = 18/321 (5%)
Query: 45 LNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL 104
L++++ A D +R V + G A F+ PRR N M++ Y+
Sbjct: 69 LHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVA 128
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
G++ AR+VFD M RDLVSWN MI GY + AR +F+ RD SW++M+S Y
Sbjct: 129 RGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAY 188
Query: 165 AQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI---EEACMLFES-KANWEV 216
A+ + A ++ M + + IS +L+A G + E ES + ++
Sbjct: 189 AKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDM 248
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
+L+ + K + ++ +F MPV+D ++W++MI G A + +A LF E +
Sbjct: 249 KLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQ 308
Query: 277 DV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDM 327
+ T+ ++ G V++ + F +M + + V + M+ + ++
Sbjct: 309 GLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEE 368
Query: 328 ARELFEAMTCK-NVASWNTMI 347
A EL +MT K + W T++
Sbjct: 369 AMELIRSMTFKPDPIIWRTLL 389
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 91/226 (40%), Gaps = 71/226 (31%)
Query: 424 LGKQLHGQLVKVGFEAG-CFVGNALLVMYCKC---------------------------- 454
LG LH + ++ GF A FV AL+ MY K
Sbjct: 65 LGASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLA 124
Query: 455 -----GSVEEAYHAFEEIVDKDVISWNTMIAGYARHG----------------------- 486
G V EA F+ + +D++SWNTMI GYA G
Sbjct: 125 AYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSM 184
Query: 487 --------FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY--FYSMNRD 536
K+AL L+ M+ G+ PD I+MV +LSACS G + G E F NR
Sbjct: 185 ISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNR- 243
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V + K T +VD+ + G ++ + + MP + D TW +++
Sbjct: 244 --VEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVK-DVLTWSSMI 286
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/562 (42%), Positives = 335/562 (59%), Gaps = 15/562 (2%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNY-------LAEAQRLFEEAPVKDVFTWTAM 284
L A +FDR+ + +N++I Y ++ L R+ + D FT +
Sbjct: 128 LDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFV 187
Query: 285 VSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+ +V R + E + ++I YV+ + AR+LF+ M +++
Sbjct: 188 LKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDM 247
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
ASWN +I GY + GEI A +LF+RM + +SW A+I+GY Q+G++E +L LF EM +
Sbjct: 248 ASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQD 307
Query: 401 GERL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G + N SVL CA A+LE G+++H +G V AL MY KC S+
Sbjct: 308 GSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLV 367
Query: 459 EAYHAFEEIVD--KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
EA F+ I K++I+WNTMI YA HG G +A+ +FE+M G++PD +T +G+LS
Sbjct: 368 EARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSG 427
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH+GL++ G +F M + V P +HY C+VDLLGRAGRL EA+ L+ MP + +
Sbjct: 428 CSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPS 487
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
WGALL ACR + E+AE AA +F +EP+N+G YVLLSNLYA +G W +V K+R ++
Sbjct: 488 VWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLK 547
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
+G+KK G SW+E+ K H F D HP+ IY +LE L K+K G++ T VLH
Sbjct: 548 YQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLH 607
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
D+ EEEKE+ L HSEKLA+A+G+L+ G +RV KNLR+C DCH A K ISKI R I
Sbjct: 608 DISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREI 667
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
I+RD NRFH F GSCSCGDYW
Sbjct: 668 IVRDLNRFHCFKDGSCSCGDYW 689
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 171/342 (50%), Gaps = 31/342 (9%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
++I Y+ G + AR++FD+M RD+ SWN +I+GY++ + A +LFE M R++VS
Sbjct: 221 SLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS 280
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLE------KNEISWNGLLAAYVQNGRIEEACMLFES 210
W M+SGY QNG+A+ A +FD ML+ N ++ +L A Q+ +E + +
Sbjct: 281 WTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF 340
Query: 211 KANWEVVSWNS-----LMGGFVKQKRLGDAKWIFDRMPV--RDEVSWNTMITGYAQNNYL 263
AN + NS L G + K L +A+ FD + ++ ++WNTMIT YA +
Sbjct: 341 -ANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCG 399
Query: 264 AEAQRLFE---EAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNA 314
EA +FE A V+ D T+ ++SG +G +D F+ M ++V +
Sbjct: 400 VEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYAC 459
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITG--YAQSGEITH--ARNLFDRMPQH 369
++ + R+ A+EL M + S W ++ ++ EI AR LF P +
Sbjct: 460 VVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDN 519
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
++ + YA++G E+ +L +K G + +SP S
Sbjct: 520 SG-NYVLLSNLYAEAGMWEEVKKLRALLKYQG--MKKSPGCS 558
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 31/329 (9%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
M++ Y +G LD A VFD++ + +N +I Y R+ E + +
Sbjct: 118 MVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGL 177
Query: 158 --NTMLSGYAQNGYADAARRIFDRM---------LEKNEISWNGLLAAYVQNGRIEEACM 206
+ + AD +R R LE + L+ YV+ G I +A
Sbjct: 178 LGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARK 237
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
LF+ ++ SWN+L+ G++K+ +G A+ +F+RM R+ VSW MI+GY QN + +A
Sbjct: 238 LFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQA 297
Query: 267 QRLFEE-----APVKDVFTWTAMVS---GYVQNGKVDEARMIFDAMP----EKNTVSWNA 314
LF+E + +K W +VS Q+ ++ R I D N+ A
Sbjct: 298 LGLFDEMLQDGSEMKP--NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTA 355
Query: 315 MIAGYVQTKRMDMARELFE--AMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQ 368
+ Y + + AR F+ A KN+ +WNTMIT YA G A ++F+ M Q
Sbjct: 356 LAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQ 415
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
D +++ +++G + SG + L F +M
Sbjct: 416 PDAVTFMGLLSGCSHSGLIDAGLNHFNDM 444
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 63/315 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN I +M+ G A +F M R+ VS+ AMISGY NG + A +FD+M
Sbjct: 246 DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEML 305
Query: 120 QRDL---VSWNVMIS--------------------------------------GYVRNKS 138
Q +W ++S Y + S
Sbjct: 306 QDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYS 365
Query: 139 LSAARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLL 192
L AR F+M+ + +++++WNTM++ YA +G A IF+ ML + + +++ GLL
Sbjct: 366 LVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLL 425
Query: 193 AAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+ +G I+ F V + ++ + RL +AK + +MP++
Sbjct: 426 SGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAG 485
Query: 248 VS-WNTMITG--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI-- 300
S W ++ +N +AE A+RLF P + + + + Y + G +E + +
Sbjct: 486 PSVWGALLAACRSHRNLEIAELAARRLFVLEP-DNSGNYVLLSNLYAEAGMWEEVKKLRA 544
Query: 301 ---FDAMPEKNTVSW 312
+ M + SW
Sbjct: 545 LLKYQGMKKSPGCSW 559
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
++LG+Q H Q+V G + F+ ++ MY G ++ A F+ I + + +N++I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152
Query: 482 YARHGFGKDALMLFES---MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
Y RHG E+ M +G+ D+ T+ +L +C+ V G + G
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMG-RCVHGQGLRVG 211
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ + ++D+ + G + +A+ L M D A+W AL+ G+ +AE
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALIAGYMKEGEIGVAEDLF 270
Query: 599 EVIFEMEPENAGMYVLLSNLYAASG 623
E ME N + + + Y +G
Sbjct: 271 E---RMEHRNIVSWTAMISGYTQNG 292
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/607 (37%), Positives = 359/607 (59%), Gaps = 49/607 (8%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APV 275
+SL ++K R+ DA+ +FDRMP RD V W+ MI GY++ + EA+ LF E
Sbjct: 143 SSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVE 202
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSW-------------NAMI 316
++ +W M++G+ NG DEA +F M P+ +TVS A +
Sbjct: 203 PNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQV 262
Query: 317 AGYVQTKRM---------------------DMARELFEAMTCKNVASWNTMITGYAQSGE 355
GYV + + +M+R +F+ + + S N +TG +++G
Sbjct: 263 HGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSR-VFDEVEEMEIGSLNAFLTGLSRNGM 321
Query: 356 ITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ A +F++ + ++W +IIA +Q+G ++L LF +M+ YG N S
Sbjct: 322 VDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPS 381
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
++ C N+++L GK++H ++ G +VG+AL+ MY KCG ++ A F+++ +
Sbjct: 382 LIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALN 441
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
++SWN ++ GYA HG K+ + +F M G KPD +T +LSAC+ GL E+G +
Sbjct: 442 LVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYN 501
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
SM+ ++G+ P +HY C+V LL R G+L+EA +++K MPFEPDA WGALL +CR++
Sbjct: 502 SMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNL 561
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
L E AAE +F +EP N G Y+LLSN+YA+ G W + +++R M+ +G++K GYSW+EV
Sbjct: 562 SLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEV 621
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
+KVH GD HP+ I L++L ++K+ G++ T VL DV E++KE +L HS
Sbjct: 622 GHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHS 681
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EKLAV G+L+ G+P++V+KNLR+C+DCH IK IS++ GR I +RD NRFHHF G
Sbjct: 682 EKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGV 741
Query: 772 CSCGDYW 778
CSCGD+W
Sbjct: 742 CSCGDFW 748
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 200/450 (44%), Gaps = 83/450 (18%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISG----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
LDP +Q+ ++ +++ S Y++ + AR LF+ MP RDVV W+ M++G
Sbjct: 120 LDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAG 179
Query: 164 YAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE---SKANW-- 214
Y++ G + A+ +F M +E N +SWNG+LA + NG +EA +F + W
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239
Query: 215 --------------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
E V + + G+V ++ LG K++ + M+ Y +
Sbjct: 240 GSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVV-----------SAMLDMYGKC 288
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVSWNAMI 316
+ E R+F+E ++ + A ++G +NG VD A +F D E N V+W ++I
Sbjct: 289 GCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSII 348
Query: 317 AGYVQTKRMDMARELFEAM-----------------TCKNVASW---------------- 343
A Q + A ELF M C N+++
Sbjct: 349 ASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIF 408
Query: 344 ------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+ +I YA+ G I AR FD+M + +SW A++ GYA G +++++ +F M
Sbjct: 409 DDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMM 468
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGS 456
+ G++ + FT VLS CA E G + + + + G E L+ + + G
Sbjct: 469 LQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGK 528
Query: 457 VEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+EEAY +E+ + D W +++ H
Sbjct: 529 LEEAYSIIKEMPFEPDACVWGALLSSCRVH 558
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 160/356 (44%), Gaps = 44/356 (12%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRM-PVR---DEVSWNTMITGYAQNNYLAEAQRLFE 271
+ S++SL+ F + F + P+R D + I A L Q+L
Sbjct: 69 LFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHA 128
Query: 272 EAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
A + D +++ Y++ ++ +AR +FD MP+++ V W+AMIAGY + ++
Sbjct: 129 FAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEE 188
Query: 328 ARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
A+ELF M N+ SWN M+ G+ +G A +F M ++ G+
Sbjct: 189 AKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMM----------LVQGFWP 238
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G S + VL L + +G Q+HG ++K G + FV
Sbjct: 239 DG---------------------STVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFV 277
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
+A+L MY KCG V+E F+E+ + ++ S N + G +R+G AL +F K +
Sbjct: 278 VSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKM 337
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
+ + +T I+++CS G + E F M + YGV PN+ ++ G L
Sbjct: 338 ELNVVTWTSIIASCSQNGKDLEALELFRDM-QAYGVEPNAVTIPSLIPACGNISAL 392
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 176/437 (40%), Gaps = 88/437 (20%)
Query: 70 THMRNGC--CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDL 123
THM C A +F+ MP R V ++AMI+GY G ++ A+++F +M + +L
Sbjct: 146 THMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNL 205
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSW-------------------- 157
VSWN M++G+ N A +F MM P VS
Sbjct: 206 VSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGY 265
Query: 158 -------------NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+ ML Y + G R+FD + E S N L +NG ++ A
Sbjct: 266 VIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTA 325
Query: 205 CMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITG 256
+F + K VV+W S++ + + +A +F M + V+ ++I
Sbjct: 326 LEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPA 385
Query: 257 YAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
+ L + + DV+ +A++ Y + G++ AR FD M N VSW
Sbjct: 386 CGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSW 445
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
NA++ GY + E+F M QSG+ + D +
Sbjct: 446 NAVMKGYAMHGKAKETMEMFHMML---------------QSGQ------------KPDLV 478
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
++ +++ AQ+G +E+ R + M + +G + +++ + + LE + +
Sbjct: 479 TFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLE---EAYSI 535
Query: 432 LVKVGFEAGCFVGNALL 448
+ ++ FE V ALL
Sbjct: 536 IKEMPFEPDACVWGALL 552
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 4/214 (1%)
Query: 344 NTMITGYAQSGEITHAR---NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
++++ YA + ++ + L +P S++++I +A+S + L F +
Sbjct: 39 TSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPL 98
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
+ S + +CA+L +L+ G+QLH GF V ++L MY KC + +A
Sbjct: 99 RLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDA 158
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F+ + D+DV+ W+ MIAGY+R G ++A LF M++ G++P+ ++ G+L+ +
Sbjct: 159 RKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNN 218
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
G ++ F M G P+ +C++ +G
Sbjct: 219 GFYDEAVGMFRMMLVQ-GFWPDGSTVSCVLPAVG 251
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 34/257 (13%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQ 113
+ +I N +T RNG D+AL VFN + + V++ ++I+ NG+ A +
Sbjct: 303 EMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALE 362
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-------------DVVSWNTM 160
+F RD+ ++ V + + A N+ +M + DV + +
Sbjct: 363 LF-----RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSAL 417
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC----MLFESKANWEV 216
+ YA+ G ARR FD+M N +SWN ++ Y +G+ +E M+ +S ++
Sbjct: 418 IDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDL 477
Query: 217 VSWNSLMGGFVKQKRLGDAKW-IFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLF 270
V++ ++ Q L + W ++ M + + ++T ++ L EA +
Sbjct: 478 VTFTCVLSA-CAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSII 536
Query: 271 EEAPVK-DVFTWTAMVS 286
+E P + D W A++S
Sbjct: 537 KEMPFEPDACVWGALLS 553
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/681 (37%), Positives = 379/681 (55%), Gaps = 64/681 (9%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
LS A ++FE + + +++ WNTM G+A N + A +++ M+ GLL
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISL------GLLPNSYSF 68
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
+ ++C +SKA ++ + G +K LG +D D ++I+ YA
Sbjct: 69 PFLLKSCA--KSKA---LIEGQQIHGHVLK---LG-----YDL----DMYVNTSLISMYA 111
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
QN L +A ++F+ + + V ++TA+++GY G ++ AR +FD + K+ VSWNAMI+G
Sbjct: 112 QNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISG 171
Query: 319 YVQTKRMDMARELFEAMTCKNVA--------------------------SW--------- 343
YV+T A EL++ M NV SW
Sbjct: 172 YVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSN 231
Query: 344 ----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N +I Y++ GE+ A LF + + D ISW +I G+ +++L LF EM R
Sbjct: 232 IKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLR 291
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAGCFVGNALLVMYCKCGSV 457
GE N SVL CA+L ++++G+ +H + K G + +L+ MY KCG +
Sbjct: 292 SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDI 351
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E A F+ ++ + + SWN MI G+A HG A LF M+ GI PDDIT VG+LSAC
Sbjct: 352 EAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSAC 411
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
SH+G+++ G F SM++DY + P +HY CM+DLLG G EA+ +++ MP EPD
Sbjct: 412 SHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVI 471
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
W +LL AC+++ EL E A+ + ++EPEN G YVLLSN+YA +GRW V+K+R + D
Sbjct: 472 WCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLND 531
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD 697
+G+KK G S +E+ + VH F +GD HP IY LEE+E +++ GFV T VL +
Sbjct: 532 KGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQE 591
Query: 698 VGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
+ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A K ISKI R II
Sbjct: 592 MEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREII 651
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
RD R H G SC DYW
Sbjct: 652 ARDRTRLHLLKDGVWSCHDYW 672
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 193/410 (47%), Gaps = 40/410 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ I+ + +NG + A VF+ R VSY A+I+GY G ++ AR++FD+
Sbjct: 97 DLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDE 156
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAA 173
+ +D+VSWN MISGYV + A L++ M K +V + T++S AQ+G +
Sbjct: 157 ISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELG 216
Query: 174 RR----IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R+ I D N N L+ Y + G +E AC LF+ A +V+SWN+L+GG
Sbjct: 217 RQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHM 276
Query: 230 KRLGDAKWIFDRMPVRDEVSWN--TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFT-- 280
+A +F M +R S N TM++ +L ++ +K V
Sbjct: 277 NLYKEALLLFQEM-LRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNAS 335
Query: 281 --WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
T+++ Y + G ++ A+ +FD+M ++ SWNAMI G+ + + A +LF M
Sbjct: 336 SLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKN 395
Query: 339 NV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSED 389
+ ++ +++ + SG + R++F M Q I+ + +I G
Sbjct: 396 GIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCG---- 451
Query: 390 SLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E K + P + S+L C ++ELG+ L+K+
Sbjct: 452 ---LFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKI 498
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/650 (37%), Positives = 352/650 (54%), Gaps = 91/650 (14%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN------------------ 261
+L+ +VK L DA IF MP RD V+WN M+ GYA +
Sbjct: 49 TALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR 108
Query: 262 -------------YLAEAQRLFEEAPVK--------------------DVFTWTAMVSGY 288
LA+ L + V V TA++ Y
Sbjct: 109 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMY 168
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK---------- 338
+ G + AR +FDAMP +N V+W+A+I G+V RM A LF+AM +
Sbjct: 169 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 228
Query: 339 ------------------------------NVASWNTMITGYAQSGEITHARNLFDRMPQ 368
++ + N++++ YA++G I A LFD M
Sbjct: 229 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D +S++A+++GY Q+G +E++ +F +M+ + + S++ C++LA+L+ G+
Sbjct: 289 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 348
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
HG ++ G + + NAL+ MY KCG ++ + F + +D++SWNTMIAGY HG G
Sbjct: 349 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 408
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A LF M +G PD +T + +LSACSH+GLV +G +F+ M YG+ P +HY C
Sbjct: 409 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC 468
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLL R G LDEA +++MP D W ALLGACR+Y +L +K + +I E+ PE
Sbjct: 469 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 528
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G +VLLSN+Y+A+GR+ + ++VR+ + +G KK G SW+E+ +H F GD HP+
Sbjct: 529 TGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 588
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
IY L+ + +K+ G+ T VL D+ EEEKE L HSEKLA+AYGILS+ +
Sbjct: 589 PEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKT 648
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I V KNLRVC DCH IKHIS + R II+RD NRFHHF G CSCGD+W
Sbjct: 649 IFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 39/406 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY------------LLNGQ 107
D+ + +++ C A H+F +MP R V++NAM++GY LL+ Q
Sbjct: 44 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 103
Query: 108 LDPAR---------QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+ R + + Q+ ++ + Y L RN + V+
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD-GVLLGT 162
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--KANWEV 216
+L YA+ G ARR+FD M +NE++W+ L+ +V R+ +A +LF++
Sbjct: 163 ALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 222
Query: 217 VSWNSLMGGF-----VKQKRLGDA-KWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRL 269
+S S+ + R+G+ + + V D + N++++ YA+ + +A L
Sbjct: 223 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 282
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRM 325
F+E VKD +++A+VSGYVQNG+ +EA ++F M E + + ++I +
Sbjct: 283 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 342
Query: 326 DMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
R ++ + +AS N +I YA+ G I +R +F+ MP D +SW +IAGY
Sbjct: 343 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 402
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
G +++ LF+EM G + F +LS C++ + GK
Sbjct: 403 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 448
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 142/356 (39%), Gaps = 107/356 (30%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY--------NAMISGYLLNGQLDPARQ 113
+Q +A T + C + LH P R+S S A++ Y G L AR+
Sbjct: 125 QQGALAQGTSVHAYCIRACLH-----PNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--------------------- 152
VFD MP R+ V+W+ +I G+V ++ A LF+ M +
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 153 -------------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
D+ + N++LS YA+ G D A +FD M K+ +S++ L++
Sbjct: 240 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 299
Query: 194 AYVQNGRIEEACMLFESKANWEV-------VSW--------------------------- 219
YVQNGR EEA ++F+ V VS
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 359
Query: 220 -----NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-- 272
N+L+ + K R+ ++ +F+ MP RD VSWNTMI GY + EA LF E
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMN 419
Query: 273 --APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
D T+ ++S +G V E + F M GY T RM+
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGH-----------GYGLTPRME 464
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M R+ N F L C+ LA G+ +H + G +A FV ALL MY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL--MLFESMKTVGIKPDDITMVGIL 514
+ +A H F + +D+++WN M+AGYA HG A+ +L M+ ++P+ T+V +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 515 SACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHY--------TCMVDLLGRAGRLDEAQNL 565
+ G + +GT + Y + NSK T ++D+ + G L A+ +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 566 MKNMPFEPDAATWGALLG 583
MP + TW AL+G
Sbjct: 181 FDAMPAR-NEVTWSALIG 197
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 132/321 (41%), Gaps = 77/321 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N ++ + + G D A+ +F+ M + +VSY+A++SGY+ NG+ + A VF +M
Sbjct: 259 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 318
Query: 120 Q-----------------------------------RDLVS----WNVMISGYVRNKSLS 140
R L S N +I Y + +
Sbjct: 319 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 378
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
+R +F MMP RD+VSWNTM++GY +G A +F M + +++ LL+A
Sbjct: 379 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 438
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMG-GFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+G ++ E K W +MG G+ R+ + M+
Sbjct: 439 HSG------LVIEGK------HWFHVMGHGYGLTPRMEH---------------YICMVD 471
Query: 256 GYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVD----EARMIFDAMPEKNTV 310
++ +L EA + P++ DV W A++ +D +RMI + PE T
Sbjct: 472 LLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE-GTG 530
Query: 311 SWNAMIAGYVQTKRMDMAREL 331
++ + Y R D A E+
Sbjct: 531 NFVLLSNIYSAAGRFDEAAEV 551
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/676 (36%), Positives = 384/676 (56%), Gaps = 19/676 (2%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ D+ N +I Y + +FE M +R+VVSW +++ GYA+ A +F
Sbjct: 163 EEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFE 222
Query: 180 MLE----KNEISWNGLLAAYVQNGRI---EEACMLF-ESKANWEVVSWNSLMGGFVKQKR 231
M+E + ++ +++A + + E C E V N+L+ ++K
Sbjct: 223 MVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGA 282
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSG 287
+ AK +FD R+ V +NT+++ YA+ EA + +E P D T + +S
Sbjct: 283 IDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 342
Query: 288 YVQ-----NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
Q GKV +I + + +++ N +I Y++ + +MA +F+ M+ K V S
Sbjct: 343 SAQLVDLFYGKVCHGYVIRNGLEGWDSIG-NVIIDMYMKCGKPEMACRVFDLMSNKTVVS 401
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN++ G+ ++G++ A +F+++P+ + + W +I+G Q ED++ LF EM+ G
Sbjct: 402 WNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI 461
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ +R + S C L + EL K +H + K G + AL+ M+ +CG + A
Sbjct: 462 KADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQ 521
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F ++ ++DV +W I A G G+ A LF M G+KPD + V +L+ACSH G
Sbjct: 522 VFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQ 581
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
VE+G + +S+ D+G+ P +HY CMVDLLGRAG L EA +L+K+MP EP+ WG+LL
Sbjct: 582 VEQGL-HIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 640
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
ACR++ E+A AAE I E+ P+ AG++VLLSN+YA++G+W DV++VRL +R++GV+K
Sbjct: 641 AACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRK 700
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
V G S ++V +H F+ GD HPE I L+E+ + G + VL DV E+E
Sbjct: 701 VPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQE 760
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE++L HSEKLA+A+G+++ PIRV+KNLR+C DCH+ K S I R II+RDNN
Sbjct: 761 KEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNN 820
Query: 763 RFHHFSGGSCSCGDYW 778
RFH F G CSC DYW
Sbjct: 821 RFHFFRQGLCSCCDYW 836
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 199/461 (43%), Gaps = 93/461 (20%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARN 144
+ + V NA++ Y+ G +D A+++FD+ R+LV +N ++S Y R ++L+
Sbjct: 264 KLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDE 323
Query: 145 LFEMMPKRDVVSWNTMLSGYAQ----------NGYADAARRIFDRMLEKNEISWNGLLAA 194
+ + P+ D V+ + +S AQ +GY + LE + N ++
Sbjct: 324 MLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGY------VIRNGLEGWDSIGNVIIDM 377
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
Y++ G+ E AC +F+ +N VVSWNSL GF++ + A +F+++P R+ V WNTMI
Sbjct: 378 YMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMI 437
Query: 255 TGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+G Q + +A LF E + D T + S G + A+ + + EKN +
Sbjct: 438 SGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYI-EKNGI 496
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
+ + T +DM +A+ G+ A +F++M + D
Sbjct: 497 PCDMRL----NTALVDM----------------------FARCGDPQSAMQVFNKMTERD 530
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+W A I A G E + LF +M G + + F VL+ C+ HG
Sbjct: 531 VSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACS-----------HG 579
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS----WNTMIAGYARHG 486
G VE+ H F + D + + M+ R G
Sbjct: 580 ------------------------GQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAG 615
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
++A F+ +K++ ++P+D+ +L+AC VE T
Sbjct: 616 LLREA---FDLIKSMPMEPNDVVWGSLLAACRVHKNVEMAT 653
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 121/229 (52%), Gaps = 5/229 (2%)
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++I GY+ +G +++ L++ M G N F VLS C +A+ G Q+HG +VK+
Sbjct: 101 SLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKM 160
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G E F+ N L+ Y +CG ++ + FE + +++V+SW ++I GYAR K+A+ LF
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
M GI+P +TMV ++SAC+ ++ G E + + G+ N +VD+ +
Sbjct: 221 FEMVEAGIRPSSVTMVCVISACAKLRDLDMG-ERVCAYIGELGLKLNKVMVNALVDMYMK 279
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
G +D A+ L + + + +L Y + LA +A ++ EM
Sbjct: 280 CGAIDAAKRLFDEC-VDRNLVLYNTILSN---YARQGLAREALAILDEM 324
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 141/325 (43%), Gaps = 20/325 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQ 120
N + +M+ G D+A +F+ R+ V YN ++S Y G A + D+M P+
Sbjct: 271 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR 330
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYADAARRI 176
D V+ IS + L + + + + W N ++ Y + G + A R+
Sbjct: 331 PDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRV 390
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
FD M K +SWN L A +++NG +E A +F V WN+++ G V++ DA
Sbjct: 391 FDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAI 450
Query: 237 WIFDRMPVR----DEVSWNTMIT--GYAQNNYLAE-AQRLFEEAPVK-DVFTWTAMVSGY 288
+F M D V+ + + GY LA+ E+ + D+ TA+V +
Sbjct: 451 ELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMF 510
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWN 344
+ G A +F+ M E++ +W A I + A LF M + +V +
Sbjct: 511 ARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFV 570
Query: 345 TMITGYAQSGEITHARNLFDRMPQH 369
++T + G++ ++F M H
Sbjct: 571 QVLTACSHGGQVEQGLHIFSLMEDH 595
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 17/281 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
NV I +M+ G + A VF+ M ++ VS+N++ +G++ NG ++ A +VF+Q+P+R+ V
Sbjct: 372 NVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAV 431
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN-GYADAAR--RIFDRML 181
WN MISG V+ A LF M + + + G A GY A + +
Sbjct: 432 FWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYI 491
Query: 182 EKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
EKN I + L+ + + G + A +F +V +W + +G + A
Sbjct: 492 EKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGAT 551
Query: 237 WIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGY 288
+F++M ++ D V + ++T + + + +F + + + MV
Sbjct: 552 GLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLL 611
Query: 289 VQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMA 328
+ G + EA + +MP E N V W +++A K ++MA
Sbjct: 612 GRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMA 652
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 21/223 (9%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE------EA 460
S L C L L KQLH Q+ K G + L+ + S E +A
Sbjct: 26 SCLNESLRCCKTLNQL---KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKA 82
Query: 461 YHAFEEIVDKD--VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
+ F+E V D + N++I GY+ G G++A++L+ M +G+ P+ T +LS C+
Sbjct: 83 FELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCT 142
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
+G + S+ + G+ + C++ G +D + + M E + +W
Sbjct: 143 KIAAFCEGIQVHGSVVK-MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMS-ERNVVSW 200
Query: 579 GALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+L+ Y + + ++A + FEM P + M ++S
Sbjct: 201 TSLICG---YARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVIS 240
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 52/266 (19%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+ WN +RNG +SA VFN +P R++V +N MISG + + A ++F +M
Sbjct: 399 VVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQG 458
Query: 121 R----------------------DLVSW-----------------NVMISGYVRNKSLSA 141
+L W ++ + R +
Sbjct: 459 EGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 518
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQ 197
A +F M +RDV +W + A G + A +F++ML + + + + +L A
Sbjct: 519 AMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH 578
Query: 198 NGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNT 252
G++E+ +F + + ++ + ++ + L +A + MP+ ++V W +
Sbjct: 579 GGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGS 638
Query: 253 MITG--YAQNNYLAE--AQRLFEEAP 274
++ +N +A A+R+ E AP
Sbjct: 639 LLAACRVHKNVEMATYAAERINELAP 664
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/572 (40%), Positives = 330/572 (57%), Gaps = 39/572 (6%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + N ++ YA L A+ LFE P ++V +W + GY++NG + AR +FD MP
Sbjct: 137 DRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP 196
Query: 306 EKNTVSWNAMIAGYVQTKR--------MDMARE------------------LFEAMTCKN 339
E+N +WNAM+AG +DM RE L + +T +
Sbjct: 197 ERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ 256
Query: 340 VASW-------NTMITG------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
V ++ M G Y + G + + +P +S IIAG Q+G
Sbjct: 257 VHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGD 316
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
SE +L F M+ G + F S +S+C++LA+L G+Q+HGQ++K G + V
Sbjct: 317 SEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTC 376
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY +CG + ++ F D + MI+ Y HG G+ A+ LF+ M G +P
Sbjct: 377 LVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPS 436
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
D+T + +L ACSH+GL E+G + F M + YG+ P+ KHYTC+VDLLGR+G LDEA+ L+
Sbjct: 437 DVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALI 496
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+MP PD W LL AC+ ++AE+ A+ + E++P ++ YVLLSN+ A S RWG
Sbjct: 497 LSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWG 556
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DVS+VR MRD V+K G SW+E++ +H F GD HP + I LEE+ K++Q G
Sbjct: 557 DVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCG 616
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ +VLHD+ +EEKE L +HSEKLA+A+ LS+P G PIRVMKNLRVC+DCH AIK
Sbjct: 617 YSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIK 676
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S++ GR I++RD +RFHHF G CSC DYW
Sbjct: 677 LMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 176/418 (42%), Gaps = 45/418 (10%)
Query: 81 LHVFNSMPRRSSVSYNA--MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
LH F + ++ + A ++ Y G L AR++F+++P+R+++SWN++ GY++N
Sbjct: 125 LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGD 184
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L AR LF+ MP+R+V +WN M++G G+ + + F M + +E +
Sbjct: 185 LGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRC 244
Query: 195 Y-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
V GR A + S + ++ +SL +++ L + + + +P VS
Sbjct: 245 CAGLRDVVTGRQVHA-YVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVS 303
Query: 250 WNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
NT+I G QN A F DV T+ + +S A+
Sbjct: 304 CNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSD----------LAALA 353
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+ + M AG ++ MTC ++ Y++ G + + +F
Sbjct: 354 QGQQIHGQVMKAG---------VDKVVPVMTC--------LVHMYSRCGCLGDSERVFFG 396
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
D +A+I+ Y G+ + ++ LF +M G + F ++L C++ E G
Sbjct: 397 YCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 456
Query: 426 KQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
+ K G + ++ + + G ++EA + + D + W T+++
Sbjct: 457 MDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 148/359 (41%), Gaps = 57/359 (15%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+A +F +PRR+ +S+N + GY+ NG L AR++FD+MP+R++ +WN M++G
Sbjct: 156 AARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGF 215
Query: 139 LSAARNLFEMMPK--------------------RDVVS-------------------WNT 159
+ F M + RDVV+ ++
Sbjct: 216 DEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSS 275
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
+ Y + G + + + +S N ++A QNG E A CM+ +
Sbjct: 276 LAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAAD 335
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRM--PVRDEV--SWNTMITGYAQNNYLAEAQRLFE 271
VV++ S + L + I ++ D+V ++ Y++ L +++R+F
Sbjct: 336 VVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFF 395
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDM 327
D F +AM+S Y +G +A +F M E + V++ A++ + +
Sbjct: 396 GYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEE 455
Query: 328 ARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ FE MT +V + ++ +SG + A L MP D + W +++
Sbjct: 456 GMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F+ + C L L +QLH G F N L++ Y G + A FE I
Sbjct: 109 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++V+SWN + GY ++G A LF+ M + + + G+ ++ G E+
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGL----TNLGFDEESLG 221
Query: 529 YFYSMNRDYGVIPN 542
+F M R+ G+ P+
Sbjct: 222 FFLDMRRE-GMHPD 234
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/754 (34%), Positives = 403/754 (53%), Gaps = 71/754 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N +++ Y G +VFD++ +R+ VSWN +IS + A F M +V
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 155 ------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS---WNGLLAAYVQNGRIEEAC 205
VS T S +++ L K E++ N L+A Y + G++ +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNN 261
+L S ++V+WN+++ + ++L +A M + DE + ++++ +
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 262 YLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
L + L A ++ F +A+V Y +V R +FD M ++ WNAMI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 317 AGYVQTKRMDMARELFEAM------------------TCKNVASW--------------- 343
AGY Q + A LF M C ++
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
NT++ Y++ G+I A +F +M D ++W +I GY S + ED+L L +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 397 MK-----------RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
M+ R + N ++L +CA L++L GK++H +K VG+
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG ++ + F++I K+VI+WN +I Y HG G++A+ L M G+KP
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+++T + + +ACSH+G+V++G FY M DYGV P+S HY C+VDLLGRAGR+ EA L
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 566 MKNMPFEPD-AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
M MP + + A W +LLGA R++ E+ E AA+ + ++EP A YVLL+N+Y+++G
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W ++VR M+++GV+K G SW+E ++VH F GD+ HP+ +++ YLE L ++++
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G+V T VLH+V E+EKE +L HSEKLA+A+GIL+ G IRV KNLRVC DCH A
Sbjct: 797 EGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 856
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKIV R IILRD RFH F G+CSCGDYW
Sbjct: 857 TKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 48/374 (12%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V V +V+ Y + G +FD + E+N VSWN++I+ ++ +MA E F
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 335 MTCKNVAS-----------------------------------------WNTMITGYAQS 353
M +NV NT++ Y +
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKL 249
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ ++ L D ++W +++ Q+ ++L EM G + +SVL
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 414 STCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C++L L GK+LH +K G + FVG+AL+ MYC C V F+ + D+ +
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 473 ISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
WN MIAGY+++ K+AL+LF M ++ G+ + TM G++ AC +G + E +
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIH 428
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
G+ + ++D+ R G++D A + M + D TW ++ Y +
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG---YVFS 484
Query: 592 ELAEKAAEVIFEME 605
E E A ++ +M+
Sbjct: 485 EHHEDALLLLHKMQ 498
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 175/409 (42%), Gaps = 74/409 (18%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS-LSAARNLFEMM 149
+S N +++ Y G+L ++ + RDLV+WN ++S +N+ L A L EM+
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 150 -----PKRDVVS-------------WNTMLSGYA-QNGYAD------------------- 171
P +S L YA +NG D
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 172 -AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANWEVVSWNSLMGGFV 227
+ RR+FD M ++ WN ++A Y QN +EA +LF E A +++ ++ M G V
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG--LLANSTTMAGVV 412
Query: 228 K--------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
++ ++ R RD NT++ Y++ + A R+F + +D+
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMP---------------EKNTVSWNAMIAGYVQTKR 324
TW M++GYV + ++A ++ M + N+++ ++
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 325 MDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ +E+ A KN VA + ++ YA+ G + +R +FD++PQ + I+W II
Sbjct: 533 LAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
Y G ++++ L M G + N F SV + C++ ++ G ++
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 116/241 (48%), Gaps = 11/241 (4%)
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W ++ +S +++ +++M G + + F ++L A+L +ELGKQ+H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 434 KVGFEAGCF-VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
K G+ V N L+ +Y KCG Y F+ I +++ +SWN++I+ + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHT----GLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
F M ++P T+V +++ACS+ GL+ + Y + + NS
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE---LNSFIINT 241
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA-CRLYGKTELAEKAAEVIFE-MEP 606
+V + G+ G+L ++ L+ + D TW +L + C+ E E E++ E +EP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 607 E 607
+
Sbjct: 301 D 301
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/588 (41%), Positives = 343/588 (58%), Gaps = 51/588 (8%)
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C++ + W+V SL+ + + +GDA+ +FD MP RD SWN MI+GY QN A
Sbjct: 18 CLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAA 77
Query: 265 EAQRLFEEAPVK----DVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
EA + +E ++ D T +++ G + +GK+ +I + + VS NA+
Sbjct: 78 EALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVS-NAL 136
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI--- 372
I Y + + A+++F + K+V SWNT+ITGYAQ+G + A ++ M +H+ I
Sbjct: 137 INMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPN 195
Query: 373 --SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+W +I+ Y+ G +L+ G ++HG
Sbjct: 196 QGTWVSILPAYSHVG-----------------------------------ALQQGMRIHG 220
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
Q++K + FVG L+ MY KCG +++A F ++ K+ + WN MI+ Y HG G+
Sbjct: 221 QVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEK 280
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
AL LF MK +KPD IT V +LSACSH+GLV F M +YG+ P+ KHY CMV
Sbjct: 281 ALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMV 340
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DL GRAG L+ A N +K MP +PDA+ WGALL ACR++G EL + A+E +FE++ EN G
Sbjct: 341 DLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVG 400
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YVLLSN+YA G+W V VR RDRG++K G+S + + NKV F G+ HP+ +
Sbjct: 401 YYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEE 460
Query: 671 IYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIR 730
IY L +L K+K G+V VL DV E+EKEH+L HSE+LA+AYGI+S PIR
Sbjct: 461 IYRELRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIR 520
Query: 731 VMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ KNLRVC DCH K IS I R II+RD++RFHHF GG+CSCGDYW
Sbjct: 521 IFKNLRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 172/375 (45%), Gaps = 66/375 (17%)
Query: 126 WNVMISG-----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
W+V ++ Y R + AR LF+ MP RD SWN M+SGY QNG A A I D M
Sbjct: 27 WDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEM 86
Query: 181 ----LEKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRL 232
++ + I+ +L Q G I ++ + +E+ N+L+ + K L
Sbjct: 87 RLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSL 146
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-------EEAP----------- 274
G A+ +F + ++D VSWNT+ITGYAQN +EA ++ E P
Sbjct: 147 GHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPA 205
Query: 275 ----------------------VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
DVF T ++ Y + GK+D+A +F +P KN+V W
Sbjct: 206 YSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPW 265
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQ 368
NAMI+ Y + A ELF M + V ++ ++++ + SG ++ A+ F+ M +
Sbjct: 266 NAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEE 325
Query: 369 HDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
I + ++ + ++G E + +K+ + + S + ++L+ C ++E
Sbjct: 326 EYGIKPSLKHYGCMVDLFGRAGELEMAFNF---IKKMPIQPDASAWGALLNACRIHGNIE 382
Query: 424 LGKQLHGQLVKVGFE 438
LGK +L +V E
Sbjct: 383 LGKHASERLFEVDSE 397
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 159/374 (42%), Gaps = 80/374 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+WD+ + + R G A +F+ MP R S+NAMISGY NG A + D+
Sbjct: 26 EWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADE 85
Query: 118 MP---------------------------------------QRDLVSWNVMISGYVRNKS 138
M + +L N +I+ Y + S
Sbjct: 86 MRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGS 145
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI-----SWNGLLA 193
L A+ +F ++ K DVVSWNT+++GYAQNG A A ++ M E EI +W +L
Sbjct: 146 LGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILP 204
Query: 194 AYVQNGRIEEAC----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
AY G +++ + ++ +V L+ + K +L DA +F ++P ++ V
Sbjct: 205 AYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVP 264
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
WN MI+ Y + +A LF E + D T+ +++S +G V +A+ F+ M
Sbjct: 265 WNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMME 324
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
E+ + ++ + M+ + ++GE+ A N +
Sbjct: 325 EEYGIK--------------------------PSLKHYGCMVDLFGRAGELEMAFNFIKK 358
Query: 366 MP-QHDCISWAAII 378
MP Q D +W A++
Sbjct: 359 MPIQPDASAWGALL 372
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 16/218 (7%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
V+ C +L GK++H ++K+GFE FV +L+ MY + G V +A F+++ +D
Sbjct: 3 VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YF 530
SWN MI+GY ++G +AL + + M+ G+K D IT+ +L C+ G + G +
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
Y + +G+ ++++ + G L AQ + + D +W L+ Y +
Sbjct: 120 YVIK--HGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI--KDVVSWNTLITG---YAQ 172
Query: 591 TELAEKAAEVIFEMEPE-----NAGMYVLLSNLYAASG 623
LA +A EV ME N G +V + Y+ G
Sbjct: 173 NGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVG 210
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 274/834 (32%), Positives = 425/834 (50%), Gaps = 127/834 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS-----------VSYNAMIS----GYLL 104
++ QWN I+++ RN + L +F M S V A +S G +
Sbjct: 147 NLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAV 206
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
+G + R V D+ N ++S Y N S+S A +F++MP+R++VSWN+M+ +
Sbjct: 207 HGLVVKTRLV------EDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVF 260
Query: 165 AQNGYADAARRIFDRMLEKN-EISW----------------------------------- 188
+ NG ++ + +M+EK+ EI++
Sbjct: 261 SDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSL 320
Query: 189 -------NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF------------VKQ 229
N L+ Y + G I +A ++F+ N VVSWN+++GGF ++Q
Sbjct: 321 DKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQ 380
Query: 230 KRLG------DAKWIFDRMPV------------------------RDEVSWNTMITGYAQ 259
G D I + +PV +E+ N + YA+
Sbjct: 381 MLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAK 440
Query: 260 NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA---------MPEKNTV 310
L+ A R+F K V +W A++ GY Q+ + R+ DA +P+ TV
Sbjct: 441 CGSLSYAHRVFCSIRSKTVNSWNALIGGYSQS---SDPRLSLDAYFQMKSSGLLPDLFTV 497
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-----WNTMITGYAQSGEITHARNLFDR 365
++++ Q K + + +E+ + +N + ++++ Y GE++ A LFD
Sbjct: 498 C--SLLSACSQIKSLKLGKEV-HGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDA 554
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
M +SW ++ GY Q+G+ E +L LF +M YG + SV C+ L SL LG
Sbjct: 555 MEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLG 614
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
++ HG +K E F+ +++ MY K GSV E++ F + ++ V SWN M+ GY H
Sbjct: 615 REAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIH 674
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G K+A+ LFE M+ G PD++T +G+L+AC+H+GLV +G Y M +G+ P KH
Sbjct: 675 GRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKH 734
Query: 546 YTCMVDLLGRAGRLDEAQNL-MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
Y C++D+L RAG+LDEA + + M EP W LL +CR++ E+ EK A +F
Sbjct: 735 YACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVS 794
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
EPE YVLLSNLYA SG+W +V KVR +M++ ++K G SW+E+ KV +F G++
Sbjct: 795 EPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESS 854
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
+ I + LE ++ + G+ T V HD+ EEEK LR HSEKLA+ YG++
Sbjct: 855 LDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTS 914
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G +RV KNLR+C DCHNA K ISK++ R I++RDN RFHHF G CSCGDYW
Sbjct: 915 EGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 267/577 (46%), Gaps = 80/577 (13%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK------ 151
+I+ Y + G D +R VFD + +++L WN +IS Y RN+ N+ EM K
Sbjct: 123 VITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNE---LYHNVLEMFVKMITESG 179
Query: 152 -------------------------------------RDVVSWNTMLSGYAQNGYADAAR 174
DV N ++S Y NG A
Sbjct: 180 LLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDAL 239
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--------ESKANWEVVSWNSLMGGF 226
R+F M E+N +SWN ++ + NG EE +L E +V + +++
Sbjct: 240 RVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVC 299
Query: 227 VKQKRLGDAKWIFD---RMPVRDEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ + +G K + ++ + EV N ++ Y++ + +AQ +F+ K+V +W
Sbjct: 300 ARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWN 359
Query: 283 AMVSGYVQNGKV----DEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMAR----E 330
MV G+ G + D R + D ++ T+ NA+ + ++ ++
Sbjct: 360 TMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTI-LNAVPVCFEESVLPNLKELHCYS 418
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
L + N N + YA+ G +++A +F + SW A+I GY+QS S
Sbjct: 419 LKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLS 478
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L + +MK G + S+LS C+ + SL+LGK++HG +++ E FV +LL +
Sbjct: 479 LDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSL 538
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y CG + A+ F+ + DK ++SWNTM+ GY ++GF + AL LF M G++P +I+M
Sbjct: 539 YIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISM 598
Query: 511 VGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTC-MVDLLGRAGRLDEAQNLMKN 568
+ + ACS + G E + Y++ ++ ++ C ++D+ + G + E+ +
Sbjct: 599 MSVFGACSLLPSLRLGREAHGYALK---CLLEDNAFIACSVIDMYAKNGSVMESFKVFNG 655
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ E A+W A++ ++G+ A++A ++ EM+
Sbjct: 656 LK-ERSVASWNAMVMGYGIHGR---AKEAIKLFEEMQ 688
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 174/403 (43%), Gaps = 57/403 (14%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
D T +++ Y G D++R +FDA+ +KN WNA+I+ Y + + E+F M
Sbjct: 116 DDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMI 175
Query: 336 -----------------TCKNVASW----------------------NTMITGYAQSGEI 356
C V+ N +++ Y +G +
Sbjct: 176 TESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSV 235
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP----FTSV 412
+ A +F MP+ + +SW ++I ++ +G SE+ L +M + + +P +V
Sbjct: 236 SDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATV 295
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L CA + +GK +HG +K+ + V NAL+ MY KCG + +A F+ +K+V
Sbjct: 296 LPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNV 355
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVG--IKPDDITMVGILSACSHTGLVEKGTE-Y 529
+SWNTM+ G++ G L M G ++ D++T++ + C ++ E +
Sbjct: 356 VSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELH 415
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
YS+ +++ V N V + G L A + ++ +W AL+G Y
Sbjct: 416 CYSLKQEF-VHNNELVANAFVASYAKCGSLSYAHRVFCSIR-SKTVNSWNALIGG---YS 470
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
++ + + F+M+ LL +L+ S+++
Sbjct: 471 QSSDPRLSLDAYFQMKSSG-----LLPDLFTVCSLLSACSQIK 508
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 26/273 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQ 113
D + WN + +++NG + AL +F M + +S ++ L L R+
Sbjct: 557 DKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGRE 616
Query: 114 VFDQ-----MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
+ ++ +V I Y +N S+ + +F + +R V SWN M+ GY +G
Sbjct: 617 AHGYALKCLLEDNAFIACSV-IDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHG 675
Query: 169 YADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKA-----NWEVVSW 219
A A ++F+ M +E+++ G+L A +G + E + N + +
Sbjct: 676 RAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHY 735
Query: 220 NSLMGGFVKQKRLGDA-KWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEA 273
++ V+ +L +A K + M V WN +++ +N + E A +LF
Sbjct: 736 ACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSE 795
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
P K + + + Y +GK DE R + M E
Sbjct: 796 PEKPE-NYVLLSNLYAGSGKWDEVRKVRQRMKE 827
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/754 (34%), Positives = 403/754 (53%), Gaps = 71/754 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N +++ Y G +VFD++ +R+ VSWN +IS + A F M +V
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 155 ------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS---WNGLLAAYVQNGRIEEAC 205
VS T S +++ L K E++ N L+A Y + G++ +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNN 261
+L S ++V+WN+++ + ++L +A M + DE + ++++ +
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 262 YLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
L + L A ++ F +A+V Y +V R +FD M ++ WNAMI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 317 AGYVQTKRMDMARELFEAM------------------TCKNVASW--------------- 343
AGY Q + A LF M C ++
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
NT++ Y++ G+I A +F +M D ++W +I GY S + ED+L L +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 397 MK-----------RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
M+ R + N ++L +CA L++L GK++H +K VG+
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG ++ + F++I K+VI+WN +I Y HG G++A+ L M G+KP
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+++T + + +ACSH+G+V++G FY M DYGV P+S HY C+VDLLGRAGR+ EA L
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 566 MKNMPFEPD-AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
M MP + + A W +LLGA R++ E+ E AA+ + ++EP A YVLL+N+Y+++G
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W ++VR M+++GV+K G SW+E ++VH F GD+ HP+ +++ YLE L ++++
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G+V T VLH+V E+EKE +L HSEKLA+A+GIL+ G IRV KNLRVC DCH A
Sbjct: 797 EGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 856
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKIV R IILRD RFH F G+CSCGDYW
Sbjct: 857 TKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 48/374 (12%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V V +V+ Y + G +FD + E+N VSWN++I+ ++ +MA E F
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 335 MTCKNVAS-----------------------------------------WNTMITGYAQS 353
M +NV NT++ Y +
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKL 249
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ ++ L D ++W +++ Q+ ++L EM G + +SVL
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 414 STCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C++L L GK+LH +K G + FVG+AL+ MYC C V F+ + D+ +
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 473 ISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
WN MIAGY+++ K+AL+LF M ++ G+ + TM G++ AC +G + E +
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIH 428
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
G+ + ++D+ R G++D A + M + D TW ++ Y +
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG---YVFS 484
Query: 592 ELAEKAAEVIFEME 605
E E A ++ +M+
Sbjct: 485 EHHEDALLLLHKMQ 498
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 175/409 (42%), Gaps = 74/409 (18%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS-LSAARNLFEMM 149
+S N +++ Y G+L ++ + RDLV+WN ++S +N+ L A L EM+
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 150 -----PKRDVVS-------------WNTMLSGYA-QNGYAD------------------- 171
P +S L YA +NG D
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 172 -AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANWEVVSWNSLMGGFV 227
+ RR+FD M ++ WN ++A Y QN +EA +LF E A +++ ++ M G V
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG--LLANSTTMAGVV 412
Query: 228 K--------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
++ ++ R RD NT++ Y++ + A R+F + +D+
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMP---------------EKNTVSWNAMIAGYVQTKR 324
TW M++GYV + ++A ++ M + N+++ ++
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 325 MDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ +E+ A KN VA + ++ YA+ G + +R +FD++PQ + I+W II
Sbjct: 533 LAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
Y G ++++ L M G + N F SV + C++ ++ G ++
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 116/241 (48%), Gaps = 11/241 (4%)
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W ++ +S +++ +++M G + + F ++L A+L +ELGKQ+H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 434 KVGFEAGCF-VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
K G+ V N L+ +Y KCG Y F+ I +++ +SWN++I+ + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHT----GLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
F M ++P T+V +++ACS+ GL+ + Y + + NS
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE---LNSFIINT 241
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA-CRLYGKTELAEKAAEVIFE-MEP 606
+V + G+ G+L ++ L+ + D TW +L + C+ E E E++ E +EP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 607 E 607
+
Sbjct: 301 D 301
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/532 (43%), Positives = 342/532 (64%), Gaps = 23/532 (4%)
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIA--- 317
+A+R F+E P + TAM SGYV+N V + +F AM ++ S A++A
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 318 -------GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG--EITHARNLFDRMPQ 368
G + +A+ FE +N NTM+ YA+ G ++ AR +FD M +
Sbjct: 62 SARVPDRGVTASLHALIAKIGFE----RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-E 116
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE--RLNRSPFTSVLSTCANLASLELGK 426
D +SW ++IA YAQ+G S +++ L+ +M G + N ++VL CA+ +++ GK
Sbjct: 117 RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGK 176
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+H Q+V++G E +VG +++ MY KCG VE A AF +I +K+++SW+ MI GY HG
Sbjct: 177 HIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHG 236
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
G++AL +F MK G++P+ IT + +L+ACSH GL+++G ++ +M +++G+ +HY
Sbjct: 237 RGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHY 296
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
CMVDLLGRAG LDEA +L+K M +PDAA WGALL ACR++ ELAE + + +FE++
Sbjct: 297 GCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDA 356
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
N+G YVLLSN+YA +G W DV ++RL ++ R ++K GYS E++ K++ F VGD HP
Sbjct: 357 SNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHP 416
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ IY+YLE+L ++++ G+V +T VLHD+ EEEKE LR HSEKLAVA+ +++
Sbjct: 417 QHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPR 476
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I ++KNLRVC DCH A+K I+KI R II+RD RFHHF G CSC DYW
Sbjct: 477 SVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 146/333 (43%), Gaps = 33/333 (9%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN------VMISGY 133
A F+ +P + V AM SGY+ N + + ++F M D S V S
Sbjct: 3 ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62
Query: 134 VRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYAD--AARRIFDRMLEKNEIS 187
R +L ++ K R+ NTML YA+ G D AR++FD M E++ +S
Sbjct: 63 ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVS 121
Query: 188 WNGLLAAYVQNGRIEEACMLFESKAN------WEVVSWNSLMGGFVKQKRLGDAKWIFD- 240
WN ++A Y QNG EA L+ N V+ ++++ + K I +
Sbjct: 122 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQ 181
Query: 241 --RMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
RM + + V T I Y++ + A R F + K++ +W+AM++GY +G+ EA
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 241
Query: 298 RMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMIT 348
IF M N +++ +++A +D R + AM + V + M+
Sbjct: 242 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 301
Query: 349 GYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
++G + A +L M + D W A+++
Sbjct: 302 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 334
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 54/263 (20%)
Query: 90 RSSVSYNAMISGYLLNGQ--LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
R++ N M+ Y G L+ AR+VFD M +RD+VSWN MI+ Y +N + A L+
Sbjct: 85 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYS 143
Query: 148 MMP-----------------------------------------KRDVVSWNTMLSGYAQ 166
M + +V +++ Y++
Sbjct: 144 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSK 203
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSL 222
G + A R F ++ EKN +SW+ ++ Y +GR +EA +F S +++ S+
Sbjct: 204 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 263
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK- 276
+ L + ++ ++ M + + M+ + L EA L +E VK
Sbjct: 264 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKP 323
Query: 277 DVFTWTAMVSGYVQNGKVDEARM 299
D W A++S + V+ A M
Sbjct: 324 DAAIWGALLSACRIHKNVELAEM 346
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
D+ WN I + +NG A+ +++ M + ++V+ +A++ G + +
Sbjct: 118 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKH 177
Query: 114 VFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ +Q+ + ++ ++ Y + + A F + +++++SW+ M++GY +G
Sbjct: 178 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 237
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVSWN 220
A IF M L N I++ +LAA G ++E M E V +
Sbjct: 238 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 297
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFE 271
++ + L +A + M V+ D W +++ +N LAE +RLFE
Sbjct: 298 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 353
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/663 (36%), Positives = 388/663 (58%), Gaps = 35/663 (5%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N +++ Y + L++A+++ + R VV+W +++SG N RR +L +
Sbjct: 46 NHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHN------RRFLPALLHFTNM 99
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+ + + +A + + + +L GG + +G + FD
Sbjct: 100 RRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCS--CFDM----- 152
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-- 304
Y + + +A +F+E P +++ TW A +S VQ+ + +A + F
Sbjct: 153 ----------YCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLC 202
Query: 305 --PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-C---KNVASWNTMITGYAQSGEITH 358
E N++++ A + V R+++ R+L + C ++V+ N +I Y + G+I
Sbjct: 203 VHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVS 262
Query: 359 ARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F+R+ + + +SW +++A Q+ E + +F++ ++ E + +SVLS CA
Sbjct: 263 AEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFM-ISSVLSACA 321
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L LELG+ +H VK E FVG+AL+ MY KCGS+E A F E+ ++++++WN
Sbjct: 322 ELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNA 381
Query: 478 MIAGYARHGFGKDALMLFESMK--TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
MI GYA G AL LFE M + GI+P +T++ ILS CS G VE+G + F SM
Sbjct: 382 MIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRL 441
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+YG+ P ++H+ C+VDLLGR+G +D A ++NM +P + WGALLGACR++GKTEL +
Sbjct: 442 NYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGK 501
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AAE +FE++ ++G +V+LSN+ A++GRW + + VR +M+D G+KK GYSW+ V+N++
Sbjct: 502 IAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRI 561
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F D+ H I A L +L +K+ G+V T L L D+ +EEK + YHSEK+A
Sbjct: 562 HVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIA 621
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+A+G++++P G PIR+ KNLR+C DCH+AIK IS+IVGR II+RDN+RFH F G CSC
Sbjct: 622 LAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCK 681
Query: 776 DYW 778
DYW
Sbjct: 682 DYW 684
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 142/348 (40%), Gaps = 92/348 (26%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN---------- 127
+SA HV + R+ V++ ++ISG + N + PA F M +RD V N
Sbjct: 59 NSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNM-RRDNVQPNDFTFPCVFKA 117
Query: 128 -----VMISG-------------------------YVRNKSLSAARNLFEMMPKRDVVSW 157
+ ++G Y + A N+F+ MP+R++ +W
Sbjct: 118 SAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATW 177
Query: 158 NTMLSGYAQNGYADAARRIFDRML----EKNEISW------------------------- 188
N +S Q+ + A F L E N I++
Sbjct: 178 NAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVR 237
Query: 189 ----------NGLLAAYVQNGRIEEACMLFESKANWE-VVSWNSLMGGFVKQKRLGDAKW 237
NGL+ Y + G I A M+F N + VVSW S++ V+ A
Sbjct: 238 CGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACM 297
Query: 238 IFDRMPVRDEVS-----WNTMITGYAQNNYLA---EAQRLFEEAPVKD-VFTWTAMVSGY 288
+F + R EV +++++ A+ L L +A V+D +F +A+V Y
Sbjct: 298 VF--LQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMY 355
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ G ++ A +F +PE+N V+WNAMI GY +DMA LFE MT
Sbjct: 356 GKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMT 403
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 144/350 (41%), Gaps = 67/350 (19%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK-SLSAARNLFEMMP---------- 150
Y G A +FD+MPQR+L +WN IS V+++ SL A E +
Sbjct: 153 YCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITF 212
Query: 151 ----------------------------KRDVVSWNTMLSGYAQNGYADAARRIFDRML- 181
K DV N ++ Y + G +A +F+R+
Sbjct: 213 CAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGN 272
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWE--------VVSWNSLMGGFVKQKRL 232
KN +SW +LAA VQN E ACM+F +++ E V+S + +GG L
Sbjct: 273 RKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGL----EL 328
Query: 233 G-DAKWIFDRMPVRDEV-SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
G + + V D + + ++ Y + + A+++F E P +++ TW AM+ GY
Sbjct: 329 GRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAH 388
Query: 291 NGKVDEARMIFDAMP------EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----N 339
G +D A +F+ M + V+ ++++ + ++ ++FE+M
Sbjct: 389 QGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPG 448
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAGYAQSGYSE 388
+ ++ +SG + A M IS W A++ G +E
Sbjct: 449 AEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTE 498
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----- 150
+A++ Y G ++ A QVF ++P+R+LV+WN MI GY + A LFE M
Sbjct: 349 SALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHG 408
Query: 151 -KRDVVSWNTMLSGYAQNGYADAARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEA 204
+ V+ ++LS ++ G + +IF+ M +E + ++ ++G ++ A
Sbjct: 409 IRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRA 468
Query: 205 CMLFESKANWEVVS-WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
++ A +S W +L+G + K +++ D V + +N L
Sbjct: 469 YEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVV---LSNML 525
Query: 264 AEAQRLFEEAPV 275
A A R +EEA V
Sbjct: 526 ASAGR-WEEATV 536
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-GCFVGNALLVMYCKCG 455
M + + L S S +ST ++ LG+ +H +++ F+ N L+ MY K
Sbjct: 1 MNIHPQNLLGSLLESAVSTHCSI----LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLD 56
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ A H + V++W ++I+G + AL+ F +M+ ++P+D T +
Sbjct: 57 LLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFK 116
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
A + + G + + + G+I + D+ + G +A N+ MP + +
Sbjct: 117 ASAFVQIPMTGKQ-IHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMP-QRNL 174
Query: 576 ATWGALL 582
ATW A +
Sbjct: 175 ATWNAYI 181
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 262/755 (34%), Positives = 401/755 (53%), Gaps = 86/755 (11%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE-------- 147
NA+I+ Y G ++ A +VFD+MPQR+LVSWN ++ + N + LF+
Sbjct: 235 NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEG 294
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNG-LLAAYVQNGRIE 202
+MP DV + T++ A+ G +F + K E+ N LL Y + G +
Sbjct: 295 LMP--DVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYSKCGYLC 351
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM--------- 253
EA +LF++ V+SWNS++GG+ K + A + +M + D+V N +
Sbjct: 352 EARVLFDTNEK-NVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Query: 254 -----------ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
I GYA + ++ D A V+GY + G + A +F
Sbjct: 411 EEEIQFLKLKEIHGYALRHGFIQS----------DELVANAFVAGYAKCGSLHYAEGVFC 460
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN- 344
M K SWNA+I G+VQ A +L+ M C + S +
Sbjct: 461 GMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSC 520
Query: 345 ---------------------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
++++ Y Q G+I A+ FD M + + + W +I G++Q
Sbjct: 521 GKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQ 580
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+ + D+L +F +M + L C+ +++L LGK+LH VK FV
Sbjct: 581 NEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFV 640
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
+L+ MY KCG +E++ + F+ + K ++WN +I GY HG G+ A+ LF+SM+ G
Sbjct: 641 TCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGF 700
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+PD +T + +L+AC+H GLV +G EY M +G+ P +HY C+VD+LGRAGRL+EA
Sbjct: 701 RPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEAL 760
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
L+ +P +PD+ W +LL +CR Y ++ EK A + E+ P+ A YVL+SN YA G
Sbjct: 761 ELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLG 820
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W +V K+R +M++ G++K G SW+E+ KV F VGD + +I ELE K+
Sbjct: 821 KWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKIN 880
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+ T VLH++ E+EK +LR HSEKLA+++G+L+ G +RV KNLR+C DCHN
Sbjct: 881 KIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHN 940
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK +SKI R II+RDN RFHHF G CSCGDYW
Sbjct: 941 AIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 13/284 (4%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM- 304
D V ++T Y+ + ++ +F + K++F W A++SGY++N +A +F M
Sbjct: 128 DVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI 187
Query: 305 ------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT--CKNVASWNTMITGYAQSGEI 356
P+ T+ V R+ A F T +V N +I Y + G +
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFV 247
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL--NRSPFTSVLS 414
A +FD+MPQ + +SW +++ ++G E+S LF + E L + + +V+
Sbjct: 248 ESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIP 307
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA + LG HG +K+G V ++LL MY KCG + EA F+ +K+VIS
Sbjct: 308 LCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVIS 366
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSAC 517
WN+MI GY++ + A L M+ +K +++T++ +L C
Sbjct: 367 WNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 135/273 (49%), Gaps = 9/273 (3%)
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+V ++T Y+ + +F+ + + W A+++GY ++ D++ +F+EM
Sbjct: 128 DVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI 187
Query: 399 RYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
E + + V+ C + + LG+ +HG +K + FVGNAL+ MY K G V
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFV 247
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT--VGIKPDDITMVGILS 515
E A F+++ ++++SWN+++ +G +++ LF+ + G+ PD TMV ++
Sbjct: 248 ESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIP 307
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
C+ G V G F+ + G+ K + ++D+ + G L EA+ L E +
Sbjct: 308 LCARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN--EKNV 364
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
+W +++G Y K A E++ +M+ E+
Sbjct: 365 ISWNSMIGG---YSKDRDFRGAFELLRKMQMED 394
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 412 VLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+L C ++E+G+++H + F+ + L+ MY C S ++ F K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEY 529
++ WN +++GY R+ +DA+ +F M ++ PD+ T+ ++ AC V G E
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG-EA 217
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
+ V+ + ++ + G+ G ++ A + MP + + +W +++ AC
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMYAC 272
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/551 (41%), Positives = 349/551 (63%), Gaps = 23/551 (4%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D S + ++ Y + +A+R F+E P + TAM SGYV+N V + +F AM
Sbjct: 128 DPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMI 187
Query: 306 EKNTVSW---NAMIAGYVQTKRMD-----------MARELFEAMTCKNVASWNTMITGYA 351
++ S A + + + R+ +A+ FE +N NTM+ YA
Sbjct: 188 ASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE----RNAGVVNTMLDSYA 243
Query: 352 QSG--EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE--RLNRS 407
+ G ++ AR +FD M + D +SW ++IA YAQ+G S +++ L+ +M G + N
Sbjct: 244 KGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAV 302
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
++VL CA+ +++ GK++H Q+V++G E +VG +++ MY KCG VE A AF +I
Sbjct: 303 ALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKI 362
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+K+++SW+ MI GY HG G++AL +F MK G++P+ IT + +L+ACSH GL+++G
Sbjct: 363 KEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGR 422
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
++ +M +++G+ +HY CMVDLLGRAG LDEA +L+K M +PDAA WGALL ACR+
Sbjct: 423 YWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRI 482
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+ ELAE + + +FE++ N+G YVLLSN+YA + W DV ++RL ++ R ++K GYS
Sbjct: 483 HKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYS 542
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
E++ K++ F VGD HP+ IY+YLE+L ++++ G+V +T VLHD+ EEEKE L
Sbjct: 543 SFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESAL 602
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
R HSEKLAVA+ +++ I ++KNLRVC DCH A+K I+KI R II+RD RFHHF
Sbjct: 603 RIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHF 662
Query: 768 SGGSCSCGDYW 778
G CSC DYW
Sbjct: 663 KDGLCSCRDYW 673
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 169/362 (46%), Gaps = 35/362 (9%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE--- 209
D S + +L Y ARR FD + + N + + + YV+N + + LF
Sbjct: 128 DPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMI 187
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGD-----------AKWIFDRMPVRDEVSWNTMITGYA 258
+ + VV + + F R+ D AK F+ R+ NTM+ YA
Sbjct: 188 ASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE----RNAGVVNTMLDSYA 243
Query: 259 QNNY--LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTV 310
+ L A+++F+ +DV +W +M++ Y QNG EA ++ M + N V
Sbjct: 244 KGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAV 302
Query: 311 SWNAMI-----AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+ +A++ AG +QT + + ++ +NV +++ Y++ G + A F +
Sbjct: 303 ALSAVLLACAHAGAIQTGK-RIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRK 361
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
+ + + +SW+A+I GY G +++L +F EMKR G R N F SVL+ C++ L+ G
Sbjct: 362 IKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG 421
Query: 426 KQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYA 483
+ + + + G EAG ++ + + G ++EAY +E+ V D W +++
Sbjct: 422 RYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACR 481
Query: 484 RH 485
H
Sbjct: 482 IH 483
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 140/333 (42%), Gaps = 64/333 (19%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM--------------------- 149
AR+ FD++P + V M SGYVRN + + LF M
Sbjct: 148 ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 207
Query: 150 ---PKRDVVS-----------------WNTMLSGYAQNGYAD--AARRIFDRMLEKNEIS 187
P R V + NTML YA+ G D AR++FD M E++ +S
Sbjct: 208 ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVS 266
Query: 188 WNGLLAAYVQNGRIEEACMLFESKAN------WEVVSWNSLMGGFVKQKRLGDAKWIFD- 240
WN ++A Y QNG EA L+ N V+ ++++ + K I +
Sbjct: 267 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQ 326
Query: 241 --RMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
RM + + V T I Y++ + A R F + K++ +W+AM++GY +G+ EA
Sbjct: 327 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 386
Query: 298 RMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMIT 348
IF M N +++ +++A +D R + AM + V + M+
Sbjct: 387 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 446
Query: 349 GYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
++G + A +L M + D W A+++
Sbjct: 447 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 479
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 54/263 (20%)
Query: 90 RSSVSYNAMISGYLLNGQ--LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
R++ N M+ Y G L+ AR+VFD M +RD+VSWN MI+ Y +N + A L+
Sbjct: 230 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYS 288
Query: 148 MMP-----------------------------------------KRDVVSWNTMLSGYAQ 166
M + +V +++ Y++
Sbjct: 289 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSK 348
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSL 222
G + A R F ++ EKN +SW+ ++ Y +GR +EA +F S +++ S+
Sbjct: 349 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 408
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK- 276
+ L + ++ ++ M + + M+ + L EA L +E VK
Sbjct: 409 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKP 468
Query: 277 DVFTWTAMVSGYVQNGKVDEARM 299
D W A++S + V+ A M
Sbjct: 469 DAAIWGALLSACRIHKNVELAEM 491
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
D+ WN I + +NG A+ +++ M + ++V+ +A++ G + ++
Sbjct: 263 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKR 322
Query: 114 VFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ +Q+ + ++ ++ Y + + A F + +++++SW+ M++GY +G
Sbjct: 323 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 382
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVSWN 220
A IF M L N I++ +LAA G ++E M E V +
Sbjct: 383 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 442
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFE 271
++ + L +A + M V+ D W +++ +N LAE +RLFE
Sbjct: 443 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 498
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 427 QLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
QLH ++ G F + + +ALL MY C +A AF+EI D + + M +GY R+
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 486 GFGKDALMLFESMKTVGIKPDDITMV---GILSACSHTGLV-EKG-TEYFYSMNRDYGVI 540
+L LF +M I D ++V L A S + V ++G T +++ G
Sbjct: 174 NLVYHSLELFRAM----IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE 229
Query: 541 PNSKHYTCMVDLLGRAGR--LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
N+ M+D + G L+ A+ + M E D +W +++ LY + ++ +A
Sbjct: 230 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM--ERDVVSWNSMIA---LYAQNGMSAEA 283
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/723 (34%), Positives = 401/723 (55%), Gaps = 62/723 (8%)
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYA 170
FD++ + WN++++ ++ S + LF+ M + D +++ + ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 171 DAARRIFDRML-----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
++ +L E+N + N L+A Y++N R++ A +F+ +V+SWNS++ G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 226 FVKQKRLGDAKWIFDRMPVRD-EVSWNTMITGYA--QNNYLAEAQRLFEEAPVKDVFT-- 280
+V +F +M V E+ T+++ +A ++ L R VK F+
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 281 ---WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
++ Y + G +D A+ +F M +++ VS+ +MIAGY + A +LFE M
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 336 --------------TC----------KNVASW-------------NTMITGYAQSGEITH 358
C K V W N ++ YA+ G +
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF---IEMKRYGERLNRSPFTSVLST 415
A +F M D ISW II GY+++ Y+ ++L LF +E KR+ + VL
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP--DERTVACVLPA 357
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA+L++ + G+++HG +++ G+ + V N+L+ MY KCG++ A+ F++I KD++SW
Sbjct: 358 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
MIAGY HGFGK+A+ LF M+ GI+ D+I+ V +L ACSH+GLV++G +F M
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 477
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+ + P +HY C+VD+L R G L +A ++NMP PDA WGALL CR++ +LAE
Sbjct: 478 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 537
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
K AE +FE+EPEN G YVL++N+YA + +W V ++R ++ RG++K G SW+E++ +V
Sbjct: 538 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 597
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
+ F GD+ +PE + I A+L ++ ++ ++G+ TK L D E EKE L HSEKLA
Sbjct: 598 NIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLA 657
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+A GI+S G+ IRV KNLRVC DCH K +SK+ R I+LRD+NRFH F G CSC
Sbjct: 658 MALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCR 717
Query: 776 DYW 778
+W
Sbjct: 718 GFW 720
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 151/368 (41%), Gaps = 71/368 (19%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR 121
R N + + + G DSA VF M RS VSY +MI+GY G A ++F++M +
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 122 ---------------------------------------DLVSWNVMISGYVRNKSLSAA 142
D+ N ++ Y + S+ A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
+F M +D++SWNT++ GY++N YA+ A +F+ +LE+ S + A V
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL----- 355
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
AC + + + G+ + + N+++ YA+
Sbjct: 356 PACASLSAFDKGREIHGYIMRNGYFSDRHVA-----------------NSLVDMYAKCGA 398
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAG 318
L A LF++ KD+ +WT M++GY +G EA +F+ M E + +S+ +++
Sbjct: 399 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 458
Query: 319 YVQTKRMDMARELFEAM--TCK---NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCI 372
+ +D F M CK V + ++ A++G++ A + MP D
Sbjct: 459 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 518
Query: 373 SWAAIIAG 380
W A++ G
Sbjct: 519 IWGALLCG 526
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/539 (43%), Positives = 323/539 (59%), Gaps = 14/539 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF------DAM 304
N ++ Y+ L +A LF+ V+D +W+ MV G+ + G F A
Sbjct: 774 NKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 833
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN-----TMITGYAQSGEITHA 359
P+ T+ + +I K + M R L + K + ++ Y + EI A
Sbjct: 834 PDNYTLPF--VIRACRDLKNLQMGR-LIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDA 890
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R LFD+M + D ++W +I GYA+ G + +SL LF +M+ G ++ +V+ CA L
Sbjct: 891 RFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL 950
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
++ + + + + F+ +G A++ M+ KCG VE A F+ + +K+VISW+ MI
Sbjct: 951 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMI 1010
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
A Y HG G+ AL LF M GI P+ IT+V +L ACSH GLVE+G +F M DY V
Sbjct: 1011 AAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSV 1070
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ KHYTC+VDLLGRAGRLDEA L+ +M E D WGA LGACR + LAEKAA
Sbjct: 1071 RXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAAT 1130
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E++P+N G Y+LLSN+YA +GRW DV+K+R M R +KK+ G++W+EV NK H FS
Sbjct: 1131 SLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFS 1190
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGDT HP IY L+ L KL+ G+V T VLHDV EE K +L HSEKLA+A+G
Sbjct: 1191 VGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFG 1250
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+++ P PIR++KNLRVC DCH K +S I GR+II+RD NRFHHF G+CSCGDYW
Sbjct: 1251 LIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/500 (41%), Positives = 292/500 (58%), Gaps = 14/500 (2%)
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF------ 301
V N +I Y+ L +A LF+ V+D +W+ MV G+ + G F
Sbjct: 95 VVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRC 154
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN-----TMITGYAQSGEI 356
A P+ T+ + +I K + M R L + K + ++ Y + EI
Sbjct: 155 GARPDNYTLPF--VIRACRDLKNLQMGR-LIHHIVYKFGLDLDHFVCAALVDMYVKCREI 211
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD+M + D ++W +I GYA+ G + +SL LF +M+ G ++ +V+ C
Sbjct: 212 EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFAC 271
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A L ++ + + + + F+ +G A++ MY KCG VE A F+ + +K+VISW+
Sbjct: 272 AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWS 331
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
MIA Y HG G+ AL LF M + G+ PD IT+ +L ACSH GLVE+G +F SM D
Sbjct: 332 AMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWED 391
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
Y V + KHYTC+VDLLGRAGRLDEA L+K+M E D WGA LGACR + LAEK
Sbjct: 392 YSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEK 451
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
AA + E++ +N G YVLLSN+YA +GRW DV+K+R M R +KK G++W+EV NK H
Sbjct: 452 AATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSH 511
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
FSVGDT HP IY L+ L KL+ G+V T VLHDV EE K +L HSEKLA+
Sbjct: 512 QFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAI 571
Query: 717 AYGILSIPAGRPIRVMKNLR 736
A+G+++ P PIR++KNLR
Sbjct: 572 AFGLIATPEHTPIRIIKNLR 591
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 17/292 (5%)
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N+ N +I Y+ + A LFD M D +SW+ ++ G+A+ G + F E+
Sbjct: 92 ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFREL 151
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
R G R + V+ C +L +L++G+ +H + K G + FV AL+ MY KC +
Sbjct: 152 IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREI 211
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E+A F+++ ++D+++W MI GYA G ++L+LFE M+ G+ PD + MV ++ AC
Sbjct: 212 EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFAC 271
Query: 518 SHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ G + K +Y VI T M+D+ + G ++ A+ + M E +
Sbjct: 272 AKLGAMHKARIIDDYIQRKKFQLDVILG----TAMIDMYAKCGCVESAREIFDRME-EKN 326
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY----VLLSNLYAAS 622
+W A++ A YG KA ++ M ++GM L S LYA S
Sbjct: 327 VISWSAMIAA---YGYHGQGRKALDLFPMM--LSSGMLPDKITLASLLYACS 373
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 15/291 (5%)
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N+ N ++ Y+ + A LFD M D +SW+ ++ G+A+ G + F E+
Sbjct: 768 QNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 827
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
R G R + V+ C +L +L++G+ +H + K G + FV AL+ MY KC +
Sbjct: 828 IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREI 887
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E+A F+++ ++D+++W MI GYA G ++L+LF+ M+ G+ PD + MV ++ AC
Sbjct: 888 EDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFAC 947
Query: 518 SHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ G + K +Y VI T M+D+ + G ++ A+ + M E +
Sbjct: 948 AKLGAMHKARTIDDYIQRKKFQLDVILG----TAMIDMHAKCGCVESAREIFDRME-EKN 1002
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAAS 622
+W A++ A YG KA + +F M + + L+S LYA S
Sbjct: 1003 VISWSAMIAA---YGYHGQGRKALD-LFPMMLRSGILPNKITLVSLLYACS 1049
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 27/353 (7%)
Query: 102 YLLNGQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
+ L L RQV Q ++L+ N ++ Y ++L A LF+ M RD VSW
Sbjct: 745 WFLPTNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSW 804
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV---------QNGRIEEACMLF 208
+ M+ G+A+ G F ++ N L + Q GR+ +++
Sbjct: 805 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHH-IVY 863
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
+ + + +L+ + K + + DA+++FD+M RD V+W MI GYA+ E+
Sbjct: 864 KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLV 923
Query: 269 LF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYV 320
LF EE V D +V + G + +AR I D + K + + AMI +
Sbjct: 924 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 983
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAA 376
+ ++ ARE+F+ M KNV SW+ MI Y G+ A +LF M + I+ +
Sbjct: 984 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 1043
Query: 377 IIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQL 428
++ + +G E+ LR F M + Y R + +T V+ L+ +L
Sbjct: 1044 LLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKL 1096
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 163/431 (37%), Gaps = 119/431 (27%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ---------------- 259
+V N L+ + + L DA +FD M VRD VSW+ M+ G+A+
Sbjct: 94 IVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIR 153
Query: 260 -----NNYL-------------AEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDE 296
+NY + RL K D F A+V YV+ ++++
Sbjct: 154 CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIED 213
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKN 339
AR +FD M E++ V+W MI GY + + + + LFE M C
Sbjct: 214 ARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK 273
Query: 340 VASWN----------------------TMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ + + MI YA+ G + AR +FDRM + + ISW+A+
Sbjct: 274 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAM 333
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IA Y G +L LF M G ++ S+L C++ +E G +
Sbjct: 334 IAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFF-------- 385
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
S+ E Y V DV + ++ R G +AL L +S
Sbjct: 386 -----------------SSMWEDYS-----VRTDVKHYTCVVDLLGRAGRLDEALKLIKS 423
Query: 498 MKTVGIKPDDITMVGILSAC-SHTGLV--EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
M I+ D+ L AC +H +V EK + N HY + ++
Sbjct: 424 MT---IEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQ-----NPGHYVLLSNIYA 475
Query: 555 RAGRLDEAQNL 565
AGR ++ +
Sbjct: 476 NAGRWEDVAKI 486
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 167/395 (42%), Gaps = 70/395 (17%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----------------- 120
D A +F+ M R SVS++ M+ G+ G F ++ +
Sbjct: 111 DDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC 170
Query: 121 RDLVSWNV----------------------MISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
RDL + + ++ YV+ + + AR LF+ M +RD+V+W
Sbjct: 171 RDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWT 230
Query: 159 TMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFE----S 210
M+ GYA+ G A+ + +F++M E+ ++++ ++ A + G + +A ++ +
Sbjct: 231 VMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK 290
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
K +V+ +++ + K + A+ IFDRM ++ +SW+ MI Y + +A LF
Sbjct: 291 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 350
Query: 271 ----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQ 321
+ D T +++ G V+E F +M E +V + ++ +
Sbjct: 351 PMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGR 410
Query: 322 TKRMDMARELFEAMTC-KNVASWNTMITGYAQSGEITHARN-------LFDRMPQHDCIS 373
R+D A +L ++MT K+ W + ++ A L + P H
Sbjct: 411 AGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGH---- 466
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ + YA +G ED ++ M + RL ++P
Sbjct: 467 YVLLSNIYANAGRWEDVAKIRDLMSQ--RRLKKTP 499
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 15/238 (6%)
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
+ +RLN + S L C NL + +Q+H Q G V N L+ Y ++++
Sbjct: 56 FLQRLNPKFYISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDD 112
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
AY F+ + +D +SW+ M+ G+A+ G + F + G +PD+ T+ ++ AC
Sbjct: 113 AYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRD 172
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
++ G + + +G+ + H+ C +VD+ + +++A+ L M E D T
Sbjct: 173 LKNLQMG-RLIHHIVYKFGL--DLDHFVCAALVDMYVKCREIEDARFLFDKMQ-ERDLVT 228
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGM--YVLLSNLYAASGRWGDVSKVRL 633
W ++G GK + V+FE E + V + + A + G + K R+
Sbjct: 229 WTVMIGGYAECGKA----NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARI 282
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 163/392 (41%), Gaps = 64/392 (16%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----------------- 120
D A +F+ M R SVS++ M+ G+ G F ++ +
Sbjct: 787 DDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRAC 846
Query: 121 RDLVSWNV----------------------MISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
RDL + + ++ Y + + + AR LF+ M +RD+V+W
Sbjct: 847 RDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWT 906
Query: 159 TMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFE----S 210
M+ GYA+ G A+ + +FD+M E+ ++++ ++ A + G + +A + +
Sbjct: 907 VMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRK 966
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
K +V+ +++ K + A+ IFDRM ++ +SW+ MI Y + +A LF
Sbjct: 967 KFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 1026
Query: 271 ----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQ 321
+ + T +++ G V+E F M E +V + ++ +
Sbjct: 1027 PMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGR 1086
Query: 322 TKRMDMARELFEAMTC-KNVASWNTMITGYAQSGEITHAR----NLFDRMPQHDCISWAA 376
R+D A +L +MT K+ W + ++ A +L + PQ+ +
Sbjct: 1087 AGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPG-HYIL 1145
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ YA +G ED ++ M + RL + P
Sbjct: 1146 LSNIYANAGRWEDVAKIRDLMSQ--RRLKKIP 1175
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+Q+H Q G V N L+ Y ++++AY F+ + +D +SW+ M+ G+A+
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G + F + G +PD+ T+ ++ AC ++ G + + +G+ + H
Sbjct: 815 GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG-RLIHHIVYKFGL--DLDH 871
Query: 546 YTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+ C +VD+ G+ +++A+ L M E D TW ++G
Sbjct: 872 FVCAALVDMYGKCREIEDARFLFDKMX-ERDLVTWTVMIGG 911
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ I H + GC +SA +F+ M ++ +S++AMI+ Y +GQ A +F M
Sbjct: 971 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 1030
Query: 120 QRDLVSWNVMISGYVRNKS----LSAARNLFEMM-----PKRDVVSWNTMLSGYAQNGYA 170
+ ++ + + + S + F M + DV + ++ + G
Sbjct: 1031 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRL 1090
Query: 171 DAARRIFDRM-LEKNEISWNGLLAA 194
D A ++ M EK+E W L A
Sbjct: 1091 DEALKLIXSMTXEKDEGLWGAFLGA 1115
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ I + + GC +SA +F+ M ++ +S++AMI+ Y +GQ A +F M
Sbjct: 295 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 354
Query: 120 QRDLVSWNVMISGYVRNKS----LSAARNLFEMM-----PKRDVVSWNTMLSGYAQNGYA 170
++ + ++ + S + F M + DV + ++ + G
Sbjct: 355 SSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRL 414
Query: 171 DAARRIFDRM-LEKNEISWNGLLAA 194
D A ++ M +EK+E W L A
Sbjct: 415 DEALKLIKSMTIEKDEGLWGAFLGA 439
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/754 (34%), Positives = 403/754 (53%), Gaps = 71/754 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N +++ Y G +VFD++ +R+ VSWN +IS + A F M +V
Sbjct: 50 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 109
Query: 155 ------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS---WNGLLAAYVQNGRIEEAC 205
VS T S +++ L K E++ N L+A Y + G++ +
Sbjct: 110 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 169
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNN 261
+L S ++V+WN+++ + ++L +A M + DE + ++++ +
Sbjct: 170 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 229
Query: 262 YLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
L + L A ++ F +A+V Y +V R +FD M ++ WNAMI
Sbjct: 230 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 289
Query: 317 AGYVQTKRMDMARELFEAM------------------TCKNVASW--------------- 343
AGY Q + A LF M C ++
Sbjct: 290 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 349
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
NT++ Y++ G+I A +F +M D ++W +I GY S + ED+L L +
Sbjct: 350 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 409
Query: 397 MK-----------RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
M+ R + N ++L +CA L++L GK++H +K VG+
Sbjct: 410 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 469
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG ++ + F++I K+VI+WN +I Y HG G++A+ L M G+KP
Sbjct: 470 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 529
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+++T + + +ACSH+G+V++G FY M DYGV P+S HY C+VDLLGRAGR+ EA L
Sbjct: 530 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 589
Query: 566 MKNMPFEPD-AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
M MP + + A W +LLGA R++ E+ E AA+ + ++EP A YVLL+N+Y+++G
Sbjct: 590 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 649
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W ++VR M+++GV+K G SW+E ++VH F GD+ HP+ +++ YLE L ++++
Sbjct: 650 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 709
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G+V T VLH+V E+EKE +L HSEKLA+A+GIL+ G IRV KNLRVC DCH A
Sbjct: 710 EGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 769
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKIV R IILRD RFH F G+CSCGDYW
Sbjct: 770 TKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 48/374 (12%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V V +V+ Y + G +FD + E+N VSWN++I+ ++ +MA E F
Sbjct: 43 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 102
Query: 335 MTCKNVAS-----------------------------------------WNTMITGYAQS 353
M +NV NT++ Y +
Sbjct: 103 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKL 162
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ ++ L D ++W +++ Q+ ++L EM G + +SVL
Sbjct: 163 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 222
Query: 414 STCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C++L L GK+LH +K G + FVG+AL+ MYC C V F+ + D+ +
Sbjct: 223 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 282
Query: 473 ISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
WN MIAGY+++ K+AL+LF M ++ G+ + TM G++ AC +G + E +
Sbjct: 283 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIH 341
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
G+ + ++D+ R G++D A + M + D TW ++ Y +
Sbjct: 342 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG---YVFS 397
Query: 592 ELAEKAAEVIFEME 605
E E A ++ +M+
Sbjct: 398 EHHEDALLLLHKMQ 411
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 175/409 (42%), Gaps = 74/409 (18%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS-LSAARNLFEMM 149
+S N +++ Y G+L ++ + RDLV+WN ++S +N+ L A L EM+
Sbjct: 148 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 207
Query: 150 -----PKRDVVS-------------WNTMLSGYA-QNGYAD------------------- 171
P +S L YA +NG D
Sbjct: 208 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 267
Query: 172 -AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANWEVVSWNSLMGGFV 227
+ RR+FD M ++ WN ++A Y QN +EA +LF E A +++ ++ M G V
Sbjct: 268 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG--LLANSTTMAGVV 325
Query: 228 K--------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
++ ++ R RD NT++ Y++ + A R+F + +D+
Sbjct: 326 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 385
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMP---------------EKNTVSWNAMIAGYVQTKR 324
TW M++GYV + ++A ++ M + N+++ ++
Sbjct: 386 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 445
Query: 325 MDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ +E+ A KN VA + ++ YA+ G + +R +FD++PQ + I+W II
Sbjct: 446 LAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 504
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
Y G ++++ L M G + N F SV + C++ ++ G ++
Sbjct: 505 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 553
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF-VGNALLVMYCKCGSVEE 459
G + + F ++L A+L +ELGKQ+H + K G+ V N L+ +Y KCG
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
Y F+ I +++ +SWN++I+ + AL F M ++P T+V +++ACS+
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 520 T----GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
GL+ + Y + + NS +V + G+ G+L ++ L+ + D
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGE---LNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DL 180
Query: 576 ATWGALLGA-CRLYGKTELAEKAAEVIFE-MEPE 607
TW +L + C+ E E E++ E +EP+
Sbjct: 181 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 214
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 358/625 (57%), Gaps = 29/625 (4%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
++ YA G + R IFD + +KN + +N ++ +YV N +A ++F++ A +
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
+ +K + W V ++ + G N VF
Sbjct: 137 HYTYPCVLKASSGSEDLW------VGMQIHAAVVRVGLDLN-----------------VF 173
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC-- 337
++S Y + G + EA + D MP ++ VSWN+++AG + + D A E+ + M
Sbjct: 174 VGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG 233
Query: 338 --KNVASWNTMITGYAQS--GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ + +++ + ++ + +F ++ +SW +IA Y + +++ +
Sbjct: 234 LKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDI 293
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F++M+ + + SVL C +L++L LG+++H +V+ + + NAL+ MY K
Sbjct: 294 FLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAK 353
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG +E A F+++ +DV+SW +MI+ Y +G G+DA+ LF M+ +G+ PD I V +
Sbjct: 354 CGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSV 413
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
LSACSH GL+++G YF M + ++P +H+ CMVDLLGRAG++DEA +K MP EP
Sbjct: 414 LSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEP 473
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+ WGALL ACR+Y + AA+ +F++ PE +G YVLLSN+YA +GRW DV+ VR
Sbjct: 474 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRS 533
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M+ +G+KK+ G S E+ N+VHTF GD HP+ +IY L+ K+K+ G+V T
Sbjct: 534 IMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDS 593
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
LHDV EE+KE L HSEKLA+A+ IL+ G PIR+ KNLRVC DCH A K ISKIVG
Sbjct: 594 ALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVG 653
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R I +RD NRFHHF G CSCGDYW
Sbjct: 654 REITIRDTNRFHHFYNGVCSCGDYW 678
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 193/416 (46%), Gaps = 44/416 (10%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR 135
C D LH S+ + ++ Y + G+ R +FD++P++++V +NVMI YV
Sbjct: 62 CIDHDLHSNPSLGIK-------LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114
Query: 136 NKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYAD---------AARRIFDRMLE 182
N S A +F+ M D ++ +L A +G D A R+ L+
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLK--ASSGSEDLWVGMQIHAAVVRVG---LD 169
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
N NGL++ Y + G + EAC + + +VVSWNSL+ G + + DA + M
Sbjct: 170 LNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 229
Query: 243 PV----RDEVSWNTMITGYAQN--NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+ D + +++ + ++ + +F + K + +W M++ Y+ N E
Sbjct: 230 ELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAE 289
Query: 297 ARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMIT 348
A IF D + + +S +++ + + R + E + K N+ N +I
Sbjct: 290 AVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALID 349
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
YA+ G + +AR +FD+M D +SW ++I+ Y +G D++ LF M+ G +
Sbjct: 350 MYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIA 409
Query: 409 FTSVLSTCANLASLELGK---QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
F SVLS C++ L+ G+ +L + K+ FV ++ + + G V+EAY
Sbjct: 410 FVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLLGRAGQVDEAY 463
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 142/295 (48%), Gaps = 23/295 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
N +IS Y G L A +V DQMP RD+VSWN +++G RN A + + M K
Sbjct: 176 NGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLK 235
Query: 152 RDVVSWNTMLSGYAQNGYADAA--RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF- 208
D + ++L + + + +F ++ K+ +SWN ++A Y+ N EA +F
Sbjct: 236 PDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFL 295
Query: 209 ---ESKANWEVVSWNSLMG--GFVKQKRLGDA--KWIFDRMPVRDEVSWNTMITGYAQNN 261
+ + + +S S++ G + LG +++ + + + N +I YA+
Sbjct: 296 QMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCG 355
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIA 317
L A+ +F++ +DV +WT+M+S Y NGK +A +F M + +++++ ++++
Sbjct: 356 CLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLS 415
Query: 318 GYVQTKRMDMARELFEAMT--CK---NVASWNTMITGYAQSGEITHARNLFDRMP 367
+D R F+ MT CK + + M+ ++G++ A +MP
Sbjct: 416 ACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMP 470
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 186/446 (41%), Gaps = 44/446 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ N I+ + + GC A V + MP R VS+N++++G NGQ D A +V +
Sbjct: 169 DLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 228
Query: 118 MP----QRDLVSWNVMISGYVRNKSL---SAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
M + D + ++ V N L S + +F + + +VSWN M++ Y N
Sbjct: 229 MELLGLKPDAGTMASLLPA-VTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMP 287
Query: 171 DAARRIF----DRMLEKNEISWN------GLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
A IF D ++ + IS G L+A + RI E + + ++ N
Sbjct: 288 AEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHE--YVVRKRLQPNLLLEN 345
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----K 276
+L+ + K L A+ +FD+M RD VSW +MI+ Y N +A LF
Sbjct: 346 ALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNP 405
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMAREL 331
D + +++S G +DE R F M E+ + + M+ + ++D A
Sbjct: 406 DSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGF 465
Query: 332 FEAMTCK-NVASWNTMITGYAQSGE----ITHARNLFDRMPQHDCISWAAIIAG-YAQSG 385
+ M + N W +++ + A LF P+ + +++ YA++G
Sbjct: 466 IKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQS--GYYVLLSNIYAKAG 523
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
ED + MK G + + P S + + G Q H Q ++ E VG
Sbjct: 524 RWEDVTTVRSIMKTKG--IKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGK 581
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKD 471
+ G V E A ++ ++D
Sbjct: 582 MK-----EAGYVPETDSALHDVEEED 602
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 34/303 (11%)
Query: 29 PANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMP 88
PA TN + + + K NK + WNV I +M N A+ +F M
Sbjct: 246 PAVTNTCLDNVSFVKEMFMKLANK-------SLVSWNVMIAVYMNNSMPAEAVDIFLQME 298
Query: 89 RRS----SVSYNAMI------SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+ ++S +++ S LL ++ V + Q +L+ N +I Y +
Sbjct: 299 DHAVDPDAISIASVLPACGDLSALLLGRRIH--EYVVRKRLQPNLLLENALIDMYAKCGC 356
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L AR +F+ M RDVVSW +M+S Y NG A +F RM L + I++ +L+A
Sbjct: 357 LEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSA 416
Query: 195 YVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G ++E F E K + + ++ + ++ +A +MP+ +E
Sbjct: 417 CSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNER 476
Query: 249 SWNTMITGY-AQNNY---LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
W +++ +N L A +LF+ P + + + + + Y + G+ ++ + M
Sbjct: 477 VWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGY-YVLLSNIYAKAGRWEDVTTVRSIM 535
Query: 305 PEK 307
K
Sbjct: 536 KTK 538
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/581 (39%), Positives = 359/581 (61%), Gaps = 8/581 (1%)
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
++F S + + N L+ + K L A +FDRMP R+ +S N MI Y L
Sbjct: 94 LIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLES 153
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQ 321
A+ LF+E P ++V TW AMV+G + +EA ++F M E + S +++ G
Sbjct: 154 AKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAH 213
Query: 322 TKRMDMARELFE-AMTCK---NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ +++ M C N+ ++ Y ++G + + + MP ++W +
Sbjct: 214 LGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTL 273
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
++G AQ GY E L + MK G R ++ F SV+S+C+ LA L GKQ+H + VK G
Sbjct: 274 MSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGA 333
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ V ++L+ MY +CG ++++ F E ++DV+ W++MIA Y HG G++A+ LF
Sbjct: 334 SSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNE 393
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ + ++IT + +L ACSH GL +KG F M + YG+ +HYTC+VDLLGR+G
Sbjct: 394 MEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSG 453
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
L+EA+ ++++MP + DA W LL AC+++ E+A + A+ + ++P+++ YVLL+N
Sbjct: 454 CLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLAN 513
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
+Y+++ RW +VS+VR M+D+ VKK G SW+EV+N+VH F +GD HP+ I YLEE
Sbjct: 514 IYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEE 573
Query: 678 LEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRV 737
L ++K+ G+V T VLHD+ EEKE +LR+HSEKLA+A+ +++ P G PIRVMKNLRV
Sbjct: 574 LTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRV 633
Query: 738 CEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
C DCH AIK+IS+I II+RD++RFHHF G+CSCGDYW
Sbjct: 634 CSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 197/417 (47%), Gaps = 38/417 (9%)
Query: 84 FNSMPRRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+S+ S S + IS +LLN G+L A +FD+MP+R+++S N+MI Y+ +
Sbjct: 91 LHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGN 150
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAA 194
L +A+NLF+ MP R+V +WN M++G + + A +F RM E +E S +L
Sbjct: 151 LESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRG 210
Query: 195 YVQNGRI--EEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
G + + + K +E +V SL ++K + D + + + MP V+W
Sbjct: 211 CAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAW 270
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
NT+++G AQ Y FE V D + M +G+ D + + +
Sbjct: 271 NTLMSGKAQKGY-------FE--GVLDQYCMMKM-AGFRP-----------DKITFVSVI 309
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
S + +A Q K++ E +A V+ +++++ Y++ G + + F + D
Sbjct: 310 SSCSELAILCQGKQIHA--EAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERD 367
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+ W+++IA Y G E++++LF EM++ N F S+L C++ + G L
Sbjct: 368 VVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFD 427
Query: 431 QLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+V K G +A L+ + + G +EEA + V D I W T+++ H
Sbjct: 428 MMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIH 484
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 175/397 (44%), Gaps = 68/397 (17%)
Query: 68 ITTHMRN-----GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
I+ H+ N G +A+ +F+ MPRR+ +S N MI YL G L+ A+ +FD+MP R+
Sbjct: 106 ISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRN 165
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFD 178
+ +WN M++G + + A LF M + D S ++L G A G A +++
Sbjct: 166 VATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHA 225
Query: 179 RML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
++ E N + L Y++ G + + + + +V+WN+LM G ++ G
Sbjct: 226 YVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQK---GY 282
Query: 235 AKWIFDRMPVR-------DEVSWNTMITGYAQNNYLAEAQRL------------------ 269
+ + D+ + D++++ ++I+ ++ L + +++
Sbjct: 283 FEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSS 342
Query: 270 -----------------FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----N 308
F E +DV W++M++ Y +G+ +EA +F+ M ++ N
Sbjct: 343 LVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGN 402
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLF 363
+++ +++ D LF+ M K + + ++ +SG + A +
Sbjct: 403 EITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMI 462
Query: 364 DRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
MP + D I W +++ +E + R+ E+ R
Sbjct: 463 RSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLR 499
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 35/206 (16%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK--------------- 453
F+++L C L S+ LGKQLH + G + F+ N LL +Y K
Sbjct: 72 FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131
Query: 454 ------C----------GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
C G++E A + F+E+ D++V +WN M+ G + ++AL+LF
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M + PD+ ++ +L C+H G + G + + Y M G N + + +A
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMK--CGFECNLVVGCSLAHMYMKA 249
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALL 582
G + + + ++ MP + W L+
Sbjct: 250 GSMHDGERVINWMP-DCSLVAWNTLM 274
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 341/567 (60%), Gaps = 10/567 (1%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN----YLAEAQRLFE-EAPVK 276
L+ + K + L D + +FD P RD +++++ + + L +R+ +A
Sbjct: 44 LVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRP 103
Query: 277 DVFTWTAMVSGYVQNGKVDEARMI---FDAMP-EKNTVSWNAMIAGYVQTKRMDMARELF 332
D F ++ S + + + + F A P + V +++I Y + D AR++F
Sbjct: 104 DHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVF 163
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+++ KN W +I+GY +G A LF MP +W A+I+G+ +SG S +++
Sbjct: 164 DSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVK 223
Query: 393 LFIEMKRYGERLNRS-PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF++M+R G ++ + +S + A+LA+ LG+QLH +++GF + VGNA++ MY
Sbjct: 224 LFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMY 283
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KC + A FEEI +D+ISW TM+ G A+HG ++A L++ M G+KP+++T V
Sbjct: 284 SKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFV 343
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G++ ACSH GLV+KG + F SM +YG+ P +HYTC +DLL R+G L EA+ L+ MP+
Sbjct: 344 GLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPY 403
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
PD ATW +LL AC+ Y E++ + A+ + E+ P+ YVLLSN+YA +G+W V V
Sbjct: 404 VPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTV 463
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R M D ++K GYSW+EV + F G+ ++ I +LEEL +++Q G+V T
Sbjct: 464 RKLMADMEIRKEPGYSWIEVGREFRLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDT 523
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
V+HD+ E EKEH L HSE+LAVA+GIL P G IRV+KNLRVC DCH +K IS+I
Sbjct: 524 SSVMHDLEEHEKEHHLCLHSERLAVAFGILRSPLGSVIRVVKNLRVCNDCHTVMKFISEI 583
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD +RFHHF GG CSC ++W
Sbjct: 584 FQRKIIVRDASRFHHFEGGKCSCSEFW 610
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 156/320 (48%), Gaps = 20/320 (6%)
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
+++S Y +++ L R LF+ P+RD+ ++++L+ + + + + RML + +
Sbjct: 43 LLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALR 102
Query: 188 WNGLLAAYVQN--GRIEEACM-------LFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ + A + + R+ C+ S + + V +SL+ + K DA+ +
Sbjct: 103 PDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKV 162
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
FD + ++ V W +I+GY N EA LF P + +F WTA++SG+V++G+ A
Sbjct: 163 FDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAV 222
Query: 299 MIF-----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMIT 348
+F D + + ++ I G + R+L ++T + ++ N ++
Sbjct: 223 KLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQL-HSLTMRLGFSSSMIVGNAVVD 281
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
Y++ +I AR +F+ + D ISW ++ G AQ G +E++ L+ M G + N
Sbjct: 282 MYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVT 341
Query: 409 FTSVLSTCANLASLELGKQL 428
F ++ C++ ++ G+QL
Sbjct: 342 FVGLIYACSHAGLVQKGRQL 361
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 92/387 (23%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI--------------------------- 130
++S Y + L R +FD+ P+RDL ++ ++
Sbjct: 44 LVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRP 103
Query: 131 ---------SGYVRNKSLSAARNL---FEMMP-KRDVVSWNTMLSGYAQNGYADAARRIF 177
S R +SL + L F P D V ++++ Y + G D AR++F
Sbjct: 104 DHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVF 163
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
D ++ KN + W L++ YV NGR +EA LF S + +W +L+ GFV+ A
Sbjct: 164 DSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVK 223
Query: 238 IFDRMPVRDEVSWN-----------------------------------TMITG------ 256
+F M RD VS + +MI G
Sbjct: 224 LFVDMR-RDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDM 282
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSW 312
Y++ + + A+ +FEE +D+ +WT M+ G Q+G+ +EA ++D M + N V++
Sbjct: 283 YSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTF 342
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP 367
+I + R+LF++M + + + + ++SG + A L MP
Sbjct: 343 VGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMP 402
Query: 368 Q-HDCISWAAIIAGYAQSGYSEDSLRL 393
D +WA++++ + +E S+R+
Sbjct: 403 YVPDEATWASLLSACKKYNNAEMSIRV 429
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 136/272 (50%), Gaps = 23/272 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I + + G D A VF+S+ ++SV + A+ISGY+LNG+ D A ++F MP R L +W
Sbjct: 147 IDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWT 206
Query: 128 VMISGYVRN-KSLSAARNLFEMMPKRDVVSW-NTMLSGYAQNGYADAARRIFDRMLE--- 182
+ISG+VR+ +S+SA + +M +RD VS + + A G AD A + R L
Sbjct: 207 ALISGFVRSGESVSAVKLFVDM--RRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLT 264
Query: 183 ------KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
+ I N ++ Y + I A +FE +++SW +++ G + R +A
Sbjct: 265 MRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAF 324
Query: 237 WIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSG 287
++DRM + +EV++ +I + + + ++LF+ + + +T +
Sbjct: 325 SLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDL 384
Query: 288 YVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG 318
++G + EA + MP + +W ++++
Sbjct: 385 LSRSGHLAEAEELITTMPYVPDEATWASLLSA 416
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 60/299 (20%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W I+ ++ NG D AL +F SMP R+ ++ A+ISG++ +G+ A ++F M +RD
Sbjct: 174 WTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDM-RRDG 232
Query: 124 VSW-----------------------------------------NVMISGYVRNKSLSAA 142
VS N ++ Y + + +A
Sbjct: 233 VSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSA 292
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQN 198
R +FE + RD++SW TML G AQ+G A+ A ++DRM ++ NE+++ GL+ A
Sbjct: 293 REVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHA 352
Query: 199 GRIEEACMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNT 252
G +++ LF+S N + + + + L +A+ + MP V DE +W +
Sbjct: 353 GLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWAS 412
Query: 253 MITGYAQNN----YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK---VDEARMIFDAM 304
+++ + N + A L E P K T+ + + Y NGK VD R + M
Sbjct: 413 LLSACKKYNNAEMSIRVADNLLELRP-KYPSTYVLLSNVYAVNGKWDSVDTVRKLMADM 470
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/544 (41%), Positives = 329/544 (60%), Gaps = 10/544 (1%)
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA----RM 299
+ D + N ++ A++ L A LF + +D +W+ M+ G+V+NG + R
Sbjct: 32 IHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRE 91
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN-----TMITGYAQSG 354
+ A + + S +I T + M R L + KN + T++ YA+ G
Sbjct: 92 LIRAGSKPDNFSLPFVIKACRDTMGLIMGR-LIHSTVLKNGLHLDNFVCSTLVDMYAKCG 150
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
I +A+ LFDRMP+ D ++ +IAGYA+ G +S LF +M+R G ++ ++++
Sbjct: 151 MIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVN 210
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA L ++ + +H + + +G A++ MY KCGS++ + F+ + K+VIS
Sbjct: 211 ACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVIS 270
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W+ MI Y HG G++AL LF M GI P+ IT + +L ACSH GLV+ G + F M+
Sbjct: 271 WSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMS 330
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
YGV P+ KHYTCMVDLLGRAGRLD+A L++NM E D W A LGACR++ + +LA
Sbjct: 331 VSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLA 390
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
EKAA+++ ++ +N G Y+LLSN+YA +GRW DV+K+R M R +KK+ GY+W+EV N
Sbjct: 391 EKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNI 450
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
++ F GD H + IY L+ L KL+ G+V T VLHDV EE K +L HSEKL
Sbjct: 451 IYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKL 510
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+G+++ P G PIR+ KNLRVC DCH+ K +S I R II+RD NRFHHF G CSC
Sbjct: 511 AIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSC 570
Query: 775 GDYW 778
GDYW
Sbjct: 571 GDYW 574
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 154/329 (46%), Gaps = 23/329 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
DL+ N ++ ++K L A LF M +RD VSW+ M+ G+ +NG + + F ++
Sbjct: 34 DLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELI 93
Query: 182 EKNEISWNGLLAAYVQN---------GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
N L ++ GR+ + +L ++ + + ++L+ + K +
Sbjct: 94 RAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVL-KNGLHLDNFVCSTLVDMYAKCGMI 152
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGY 288
+AK +FDRMP +D V+ MI GYA+ E+ LF++ V D +V+
Sbjct: 153 DNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNAC 212
Query: 289 VQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
+ G +++AR++ D + + + AMI Y + +D +RE+F+ M KNV SW+
Sbjct: 213 AKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWS 272
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMK-R 399
MI Y G+ A LF M I++ +++ + +G +D L+LF M
Sbjct: 273 AMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVS 332
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQL 428
YG R + +T ++ L+ +L
Sbjct: 333 YGVRPDVKHYTCMVDLLGRAGRLDQALRL 361
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 25/316 (7%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTMLSG 163
L A +F++M +RD VSW+VMI G+V+N + R L K D S ++
Sbjct: 51 LVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKA 110
Query: 164 YAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
R I +L+ + + L+ Y + G I+ A LF+ ++V+
Sbjct: 111 CRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTR 170
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
++ G+ + + ++ +FD+M V D+V+ T++ A+ + +A+ + +
Sbjct: 171 TVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCA 230
Query: 276 K----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+ DV TAM+ Y + G +D +R IFD M +KN +SW+AMI Y + A EL
Sbjct: 231 RRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALEL 290
Query: 332 FEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRMP-----QHDCISWAAIIAGYA 382
F M N ++ +++ + +G + LF M + D + ++
Sbjct: 291 FHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLG 350
Query: 383 QSGYSEDSLRLFIEMK 398
++G + +LRL M+
Sbjct: 351 RAGRLDQALRLIENME 366
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 153/345 (44%), Gaps = 29/345 (8%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGYVRNKS 138
+FN M R VS++ MI G++ NG + Q F ++ + D S +I
Sbjct: 57 LFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMG 116
Query: 139 LSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
L R + + K D +T++ YA+ G D A+++FDRM +K+ ++ ++A
Sbjct: 117 LIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAG 176
Query: 195 YVQNGRIEEACMLFESKAN----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----D 246
Y + G+ E+ +LF+ + V+ +++ K + A+ + D + R D
Sbjct: 177 YAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD 236
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
MI YA+ + ++ +F+ K+V +W+AM+ Y +G+ EA +F M
Sbjct: 237 VELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN 296
Query: 307 K----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEIT 357
N +++ +++ +D +LF M+ +V + M+ ++G +
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLD 356
Query: 358 HARNLFDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMK 398
A L + M + D W A + + Q +E + +L + ++
Sbjct: 357 QALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQ 401
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 47/315 (14%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DL 123
+ + + G D+A +F+ MP++ V+ MI+GY G+ + + +FDQM + D
Sbjct: 143 VDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDK 202
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDR 179
V+ +++ + +++ AR + + + R DV M+ YA+ G D++R IFDR
Sbjct: 203 VAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDR 262
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M +KN ISW+ ++ AY +G+ EA LF N ++
Sbjct: 263 MEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIP--------------------- 301
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKV 294
+ +++ +++ + + + +LF V DV +T MV + G++
Sbjct: 302 ------NRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRL 355
Query: 295 DEA-RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR---ELFEAMTCKNVASWNTMITGY 350
D+A R+I + EK+ W A + +++D+A +L ++ +N + + Y
Sbjct: 356 DQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIY 415
Query: 351 AQSG---EITHARNL 362
A +G ++ RNL
Sbjct: 416 ANAGRWKDVAKIRNL 430
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 21/232 (9%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F S L C N+ + KQ+H Q+ G V N LL M K + A+ F ++
Sbjct: 6 FISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME 62
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT-GLVEKGT 527
++D +SW+ MI G+ ++G + F + G KPD+ ++ ++ AC T GL+
Sbjct: 63 ERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIM--G 120
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+S G+ ++ + +VD+ + G +D A+ L MP + D T ++
Sbjct: 121 RLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMP-KKDLVTRTVMIAGYAE 179
Query: 588 YGKTELAEKAAEVIFE------MEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
GK + V+F+ P+ M +++ A + G ++K RL
Sbjct: 180 CGKPN----ESWVLFDQMRRDGFVPDKVAMVTIVN----ACAKLGAMNKARL 223
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ I + + G DS+ +F+ M +++ +S++AMI Y +GQ A ++F M
Sbjct: 236 DVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMML 295
Query: 119 -----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-----KRDVVSWNTMLSGYAQNG 168
P R +++ ++ + LF +M + DV + M+ + G
Sbjct: 296 NSGIIPNR--ITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAG 353
Query: 169 YADAARRIFDRM-LEKNEISWNGLLAA 194
D A R+ + M +EK+E W L A
Sbjct: 354 RLDQALRLIENMEVEKDEGIWCAFLGA 380
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/572 (40%), Positives = 330/572 (57%), Gaps = 39/572 (6%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + N ++ YA L A+ LFE P ++V +W + GY++NG + AR +FD MP
Sbjct: 75 DRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP 134
Query: 306 EKNTVSWNAMIAGYVQTKR--------MDMARE------------------LFEAMTCKN 339
E+N +WNAM+AG +DM RE L + +T +
Sbjct: 135 ERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ 194
Query: 340 VASW-------NTMITG------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
V ++ M G Y + G + + +P +S IIAG Q+G
Sbjct: 195 VHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGD 254
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
SE +L F M+ G + F S +S+C++LA+L G+Q+HGQ++K G + V
Sbjct: 255 SEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTC 314
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY +CG + ++ F D + MI+ Y HG G+ A+ LF+ M G +P
Sbjct: 315 LVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPS 374
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
D+T + +L ACSH+GL E+G + F M + YG+ P+ KHYTC+VDLLGR+G LDEA+ L+
Sbjct: 375 DVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALI 434
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+MP PD W LL AC+ ++AE+ A+ + E++P ++ YVLLSN+ A S RWG
Sbjct: 435 LSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWG 494
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DVS+VR MRD V+K G SW+E++ +H F GD HP + I LEE+ K++Q G
Sbjct: 495 DVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCG 554
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ +VLHD+ +EEKE L +HSEKLA+A+ LS+P G PIRVMKNLRVC+DCH AIK
Sbjct: 555 YSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIK 614
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S++ GR I++RD +RFHHF G CSC DYW
Sbjct: 615 LMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 176/418 (42%), Gaps = 45/418 (10%)
Query: 81 LHVFNSMPRRSSVSYNA--MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
LH F + ++ + A ++ Y G L AR++F+++P+R+++SWN++ GY++N
Sbjct: 63 LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGD 122
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L AR LF+ MP+R+V +WN M++G G+ + + F M + +E +
Sbjct: 123 LGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRC 182
Query: 195 Y-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
V GR A + S + ++ +SL +++ L + + + +P VS
Sbjct: 183 CAGLRDVVTGRQVHA-YVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVS 241
Query: 250 WNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
NT+I G QN A F DV T+ + +S A+
Sbjct: 242 CNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSD----------LAALA 291
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+ + M AG ++ MTC ++ Y++ G + + +F
Sbjct: 292 QGQQIHGQVMKAG---------VDKVVPVMTC--------LVHMYSRCGCLGDSERVFFG 334
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
D +A+I+ Y G+ + ++ LF +M G + F ++L C++ E G
Sbjct: 335 YCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 394
Query: 426 KQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
+ K G + ++ + + G ++EA + + D + W T+++
Sbjct: 395 MDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 148/359 (41%), Gaps = 57/359 (15%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+A +F +PRR+ +S+N + GY+ NG L AR++FD+MP+R++ +WN M++G
Sbjct: 94 AARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGF 153
Query: 139 LSAARNLFEMMPK--------------------RDVVS-------------------WNT 159
+ F M + RDVV+ ++
Sbjct: 154 DEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSS 213
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
+ Y + G + + + +S N ++A QNG E A CM+ +
Sbjct: 214 LAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAAD 273
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRM--PVRDEV--SWNTMITGYAQNNYLAEAQRLFE 271
VV++ S + L + I ++ D+V ++ Y++ L +++R+F
Sbjct: 274 VVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFF 333
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDM 327
D F +AM+S Y +G +A +F M E + V++ A++ + +
Sbjct: 334 GYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEE 393
Query: 328 ARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ FE MT +V + ++ +SG + A L MP D + W +++
Sbjct: 394 GMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F+ + C L L +QLH G F N L++ Y G + A FE I
Sbjct: 47 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++V+SWN + GY ++G A LF+ M + + + G+ ++ G E+
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGL----TNLGFDEESLG 159
Query: 529 YFYSMNRDYGVIPN 542
+F M R+ G+ P+
Sbjct: 160 FFLDMRRE-GMHPD 172
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/528 (42%), Positives = 332/528 (62%), Gaps = 13/528 (2%)
Query: 263 LAEAQRLFE--EAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMPEKNTVSWNAM 315
++ A ++F E P+ +VF W ++ GY + G A M + E +T ++ +
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHARNLFDRMPQHDC 371
I + + + + S N+++ YA G++ A +FD+MP+ D
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
++W ++I G+A++G E++L L+ EM G + + S+LS CA + +L LGK++H
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
++KVG N LL +Y +CG VEEA F+E+VDK+ +SW ++I G A +GFGK+A
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 492 LMLFESMK-TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
+ LF+ M+ T G+ P +IT VGIL ACSH G+V++G EYF M +Y + P +H+ CMV
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLL RAG++ +A +K+MP +P+ W LLGAC ++G ++LAE A I ++EP ++G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YVLLSN+YA+ RW DV K+R +M GVKKV G+S +EV N+VH F +GD HP+ D
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 671 IYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIR 730
IYA L+E+ +L+ +G+V V DV EEEKE+ + YHSEK+A+A+ ++S P PI
Sbjct: 488 IYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPIT 547
Query: 731 VMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
V+KNLRVC DCH AIK +SK+ R I++RD +RFHHF GSCSC DYW
Sbjct: 548 VVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 170/398 (42%), Gaps = 72/398 (18%)
Query: 139 LSAARNLFEMMPKR-DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
+S A +F + K +V WNT++ GYA+ G + +A ++ E+ +GL+
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLY------REMRVSGLVEPDTH 122
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
L ++ V + V + G ++ N+++ Y
Sbjct: 123 T-----YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYV-----------QNSLLHLY 166
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK---------- 307
A +A A ++F++ P KD+ W ++++G+ +NGK +EA ++ M K
Sbjct: 167 ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIV 226
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ +S A I KR+ + + + +N+ S N ++ YA+ G + A+ LFD M
Sbjct: 227 SLLSACAKIGALTLGKRVHVY--MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN-RSPFTSVLSTCANLASLELGK 426
+ +SW ++I G A +G+ ++++ LF M+ L F +L C+
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS--------- 335
Query: 427 QLHGQLVKVGFEA-----------------GCFVGNALLVMYCKCGSVEEAYHAFEEI-V 468
H +VK GFE GC V + + G V++AY + + +
Sbjct: 336 --HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD-----LLARAGQVKKAYEYIKSMPM 388
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+V+ W T++ H G L F ++ + ++P+
Sbjct: 389 QPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPN 424
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 19/252 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
N+++ Y G + A +VFD+MP++DLV+WN +I+G+ N A L+ M K
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
D + ++LS A+ G +R+ M L +N S N LL Y + GR+EEA L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-----EVSWNTMITGYAQNNY 262
F+ + VSW SL+ G +A +F M + E+++ ++ +
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 263 LAEA----QRLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMI 316
+ E +R+ EE ++ + + MV + G+V +A +MP + N V W ++
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 317 AGYVQTKRMDMA 328
D+A
Sbjct: 400 GACTVHGDSDLA 411
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 116/248 (46%), Gaps = 19/248 (7%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LE 182
N ++ Y +++A +F+ MP++D+V+WN++++G+A+NG + A ++ M ++
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 183 KNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ + LL+A + G + + + + S N L+ + + R+ +AK +
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE-----EAPVKDVFTWTAMVSGYVQNGK 293
FD M ++ VSW ++I G A N + EA LF+ E + T+ ++ G
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 294 VDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
V E F M E+ + + M+ + ++ A E ++M + NV W T++
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 348 TGYAQSGE 355
G+
Sbjct: 400 GACTVHGD 407
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLV 124
H+ C D SA VF+ MP + V++N++I+G+ NG+ + A ++ +M + D
Sbjct: 164 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 223
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ ++S + +L+ + + M K R++ S N +L YA+ G + A+ +FD M
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
++KN +SW L+ NG +EA LF+
Sbjct: 284 VDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 133/338 (39%), Gaps = 60/338 (17%)
Query: 111 ARQVFDQMPQR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS------------- 156
A +VF ++ + ++ WN +I GY + +A +L+ M +V
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 157 ---------------------------WNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
N++L YA G +A ++FD+M EK+ ++WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMP-- 243
++ + +NG+ EEA L+ + + + SL+ K L K + M
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 244 --VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
R+ S N ++ YA+ + EA+ LF+E K+ +WT+++ G NG EA +F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 302 DAMPE-KNTVSWNAMIAGYV-QTKRMDMARELFEAM--------TCKNVASWNTMITGYA 351
M + + G + M +E FE + + M+ A
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 352 QSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
++G++ A MP Q + + W ++ G S+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN I NG + AL ++ M + + +++S G L ++V
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 116 DQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
M + R+L S NV++ Y R + A+ LF+ M ++ VSW +++ G A NG+
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 172 AARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNS 221
A +F M L EI++ G+L A G ++E F E K + +
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 365
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMI 254
++ + ++ A MP++ V W T++
Sbjct: 366 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/536 (41%), Positives = 336/536 (62%), Gaps = 10/536 (1%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKN 308
+I Y + + L +A+ +F+E P K+V +WTAM+S Y Q G EA +F M E N
Sbjct: 131 LIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPN 190
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHARNLFD 364
++ ++ + + R++ +N S ++++ YA+SG I A +F
Sbjct: 191 HFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFH 250
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+P+ D ++ AII+GYAQ G E++L+LF +++ G N + SVL+ + LA+L
Sbjct: 251 CLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNH 310
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GKQ+H +++ G + + N+L+ MY KCG+V A F+ + ++ ISWN M+ GY++
Sbjct: 311 GKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSK 370
Query: 485 HGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPN 542
HG ++ L LF+ M+ +KPD IT + +LS CSH L + G E FY+M N G+ P+
Sbjct: 371 HGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPD 430
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
HY C+VDLLGRAGR++EA + +K MPF P AA WG+LLG+CR++ E+ + +
Sbjct: 431 IGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL 490
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+EPENAG YV+LSNLYA++G+W D+ +R M+++ V K G SW+E+ VHTF D
Sbjct: 491 ELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASD 550
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP ++ + ++EL K K+DG+V VL+DV EE+KE +L HSEKLA+A+G+++
Sbjct: 551 HTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIA 610
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P G IRV+KNLR+C DCH+ K +S++ R +ILRD NRFH+ GG CSCGDYW
Sbjct: 611 TPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 56/255 (21%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKN 184
+I Y + L AR +F+ MP+++VVSW M+S Y+Q G+A A +F ML E N
Sbjct: 131 LIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPN 190
Query: 185 EISWNGLLAAY-----VQNGRIEEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKW 237
++ +L + + GR + + K N+E + +SL+ + K R+ DA
Sbjct: 191 HFTFATILTSCYGSLGFETGRQIHSIAI---KRNYESHMFVGSSLLDMYAKSGRICDAHG 247
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD-------------------- 277
+F +P RD V+ +I+GYAQ EA +LF + ++
Sbjct: 248 VFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAA 307
Query: 278 -------------------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
V +++ Y + G V AR IFD+MPE+ +SWNAM+ G
Sbjct: 308 LNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 367
Query: 319 YVQTKRMDMARELFE 333
Y + MARE+ E
Sbjct: 368 Y---SKHGMAREVLE 379
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 54/290 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD----- 122
I + + C A +F+ MP+++ VS+ AMIS Y G A +F +M + D
Sbjct: 132 IVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNH 191
Query: 123 ----------------------------------LVSWNVMISGYVRNKSLSAARNLFEM 148
+ + ++ Y ++ + A +F
Sbjct: 192 FTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHC 251
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY-----VQNG 199
+P+RDVV+ ++SGYAQ G + A ++F ++ + N +++ +L A + +G
Sbjct: 252 LPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHG 311
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+ + +L + ++ VV NSL+ + K + A+ IFD MP R +SWN M+ GY++
Sbjct: 312 KQVHSHVLRSGQYSY-VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSK 370
Query: 260 NNYLAEAQRLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+ E LF EE VK D T+ A++SG D IF M
Sbjct: 371 HGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNM 420
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 119/235 (50%), Gaps = 13/235 (5%)
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
++M G + + ++L+ C + ++ G+++H ++K + ++ L+V+Y K
Sbjct: 78 LLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNK 137
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
C + +A F+E+ K+V+SW MI+ Y++ GF +AL LF M +P+ T I
Sbjct: 138 CDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATI 197
Query: 514 LSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHY--TCMVDLLGRAGRLDEAQNLMKNMP 570
L++C + E G + + ++ R+Y S + + ++D+ ++GR+ +A + +P
Sbjct: 198 LTSCYGSLGFETGRQIHSIAIKRNY----ESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE--NAGMYVLLSNLYAASG 623
E D A++ Y + L E+A ++ +++ E N+ S L A SG
Sbjct: 254 -ERDVVACTAIISG---YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSG 304
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 59/287 (20%)
Query: 77 CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL------------- 123
CD A VF+ +P R V+ A+ISGY G + A ++F Q+ +
Sbjct: 243 CD-AHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 301
Query: 124 --------------------------VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
V N +I Y + ++ AR +F+ MP+R +SW
Sbjct: 302 LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISW 361
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV----QNGRIEEACM-LFESKA 212
N ML GY+++G A +F M E+N++ + + V +G++E+ + +F +
Sbjct: 362 NAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 421
Query: 213 NW------EVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMITGYAQNNYLAE 265
N ++ + ++ + R+ +A +MP V W +++ G + + E
Sbjct: 422 NGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL-GSCRVHSDVE 480
Query: 266 -----AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
Q+L E P ++ + + + Y GK ++ R I D M EK
Sbjct: 481 IGIIVGQKLLELEP-ENAGNYVILSNLYASAGKWEDMRNIRDLMQEK 526
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/574 (40%), Positives = 335/574 (58%), Gaps = 40/574 (6%)
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+W+ N+L+ + K L A +FD M VR V+W ++I YA+ EA RLF E
Sbjct: 30 HWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHE 89
Query: 273 ----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
D+FT T ++ NG ++ + + + + E + S
Sbjct: 90 MDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQS----------------- 132
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
N+ N ++ YA+ G + A ++F MP D ISW +I GY+++
Sbjct: 133 ----------NIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 389 DSLRLF----IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
++L LF +EMK G L +L CA+LASL+ GK++HG +++ GF + V
Sbjct: 183 EALSLFGDMVLEMKPDGTTL-----ACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NAL+ MY KCG A F+ I KD+I+W MIAGY HGFG +A+ F M+ GI+
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD+++ + IL ACSH+GL+++G +F M + V P +HY C+VDLL R+G+L A
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
+K+MP EPDA WGALL CR++ +LAEK AE +FE+EPEN G YVLL+N YA + +
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W +V K+R K+ RG+KK G SW+EV++KVH F G++ HP+ +I L+ L K+K+
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKE 477
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G+ T+ L + +KE L HSEKLA+A+GIL++P R IRV KNLRVC DCH
Sbjct: 478 EGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEM 537
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISK +GR I+LRD+NRFHHF G C C +W
Sbjct: 538 AKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 19/291 (6%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LE 182
N ++ Y + L A +F++M R VV+W ++++ YA+ G +D A R+F M +
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96
Query: 183 KNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ + +L A NG +E + E+ + N+LM + K + DA +
Sbjct: 97 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---DVFTWTAMVSGYVQNGKVD 295
F MPV+D +SWNTMI GY++N+ EA LF + ++ D T ++ +D
Sbjct: 157 FLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLD 216
Query: 296 EARMIFDAMPEKNTVS----WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
+ + + S NA++ YV+ +AR LF+ + K++ +W MI GY
Sbjct: 217 RGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYG 276
Query: 352 QSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
G +A F+ M Q D +S+ +I+ + SG ++ R F M+
Sbjct: 277 MHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQ 327
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 9/210 (4%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
S+L CAN + LG+ +HG VK N LL MY KCG ++ A F+ +
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+ V++W ++IA YAR G +A+ LF M G+ PD T+ +L AC+ G +E G +
Sbjct: 62 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD- 120
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
++ R+ + N ++D+ + G +++A ++ MP + D +W ++G Y
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG---YS 176
Query: 590 KTELAEKA----AEVIFEMEPENAGMYVLL 615
K L +A +++ EM+P+ + +L
Sbjct: 177 KNSLPNEALSLFGDMVLEMKPDGTTLACIL 206
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 141/341 (41%), Gaps = 56/341 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
N ++ Y G LD A VFD M R +V+W +I+ Y R A LF M +
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96
Query: 153 -DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
D+ + T+L A NG + + + + + ++ N N L+ Y + G +E+A +
Sbjct: 97 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR---------------------- 245
F +++SWN+++GG+ K +A +F M +
Sbjct: 157 FLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLD 216
Query: 246 ----------------DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
D+ N ++ Y + A+ LF+ P KD+ TWT M++GY
Sbjct: 217 RGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYG 276
Query: 290 QNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT--CK---NV 340
+G + A F+ M E + VS+ +++ + +D F M C +
Sbjct: 277 MHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKL 336
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ ++ A+SG++ A MP + D W A+++G
Sbjct: 337 EHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 182/414 (43%), Gaps = 52/414 (12%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSS----VSYNAMISGYLLNGQLDPARQVFD 116
+ W I + R G D A+ +F+ M R + ++ NG L+ + V +
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 117 QMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+ + D+ S N ++ Y + S+ A ++F MP +D++SWNTM+ GY++N +
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
A +F M+ E+ +G A I AC S + V + L GF +++
Sbjct: 184 ALSLFGDMVL--EMKPDGTTLAC-----ILPACASLASLDRGKEVHGHILRNGFFSDQQV 236
Query: 233 GD--------------AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE---APV 275
+ A+ +FD +P +D ++W MI GY + + A F E A +
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296
Query: 276 K-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMAR 329
+ D ++ +++ +G +DE F+ M ++ V + ++ ++ ++ MA
Sbjct: 297 EPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAY 356
Query: 330 ELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQH------DCISWAAIIAG-Y 381
+ ++M + A+ W +++G I H L +++ +H + + ++A Y
Sbjct: 357 KFIKSMPIEPDATIWGALLSGC----RIHHDVKLAEKVAEHVFELEPENTGYYVLLANTY 412
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A++ E+ +L ++ R G L ++P S + + + G H Q K+
Sbjct: 413 AEAEKWEEVKKLRQKIGRRG--LKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKI 464
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/547 (42%), Positives = 340/547 (62%), Gaps = 15/547 (2%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD--- 302
D S + ++ Y + +A++ F+E P + TAM SGYV+N V + +F
Sbjct: 124 DPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLI 183
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMA--RELFEAMTCK-----NVASWNTMITGYAQSG- 354
A V A + + + R+ A+ K + NTM+ YA+ G
Sbjct: 184 ASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGR 243
Query: 355 -EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE--RLNRSPFTS 411
++ AR +FD M + D +SW ++IA YAQ+G S D+L L+ +M + N ++
Sbjct: 244 RDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSA 302
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L CA+ +++ GK +H Q+V++G E +VG +++ MY KCG VE A AF++I +K+
Sbjct: 303 ILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKN 362
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
++SW+ MI GY HG G++AL +F M G P+ IT + +L+ACSH GL++KG ++
Sbjct: 363 ILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYN 422
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
+M + +G+ P +HY CMVDLLGRAG LDEA L+K M +PDAA WGALL ACR++
Sbjct: 423 AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNV 482
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
ELAE +A+ +FE++ N G YVLLSN+YA +G W DV ++R+ ++ RG++K GYS +E+
Sbjct: 483 ELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVEL 542
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
+ + H F VGD HP+ IY+YL +L K+++ G+V +T VLHD+ EEEK L HS
Sbjct: 543 KGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHS 602
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EKLA+A+ +++ G I V+KNLRVC DCH AIK I+KI R II+RD RFHHF GS
Sbjct: 603 EKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDGS 662
Query: 772 CSCGDYW 778
CSCGDYW
Sbjct: 663 CSCGDYW 669
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 173/401 (43%), Gaps = 73/401 (18%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM---------- 118
HM N C A F+ +P + V AM SGY+ N + P+ +F ++
Sbjct: 133 HMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVD 192
Query: 119 --------------PQRDLVS-----------------WNVMISGYVRN--KSLSAARNL 145
P + S N M+ Y + + L AAR +
Sbjct: 193 EAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKV 252
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML------EKNEISWNGLLAAYVQNG 199
F+ M K DVVSWN+M++ YAQNG + A ++ +ML + N ++ + +L A G
Sbjct: 253 FDTMEK-DVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAG 311
Query: 200 RIEEA-CM---LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
I+ C+ + V S++ + K R+ A+ F ++ ++ +SW+ MIT
Sbjct: 312 TIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMIT 371
Query: 256 GYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
GY + + EA +F E + T+ ++++ G +D+ R ++AM ++ +
Sbjct: 372 GYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIE 431
Query: 312 -----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGY-----AQSGEITHAR 360
+ M+ + +D A L + M K + A W +++ + EI+ A+
Sbjct: 432 PGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEIS-AK 490
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
LF+ + +C + + YA++G +D R+ + +K G
Sbjct: 491 RLFE-LDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRG 530
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRS-SVSYNAM-ISGYLLN----GQLDPARQ 113
D+ WN I + +NG AL ++ M S S+ NA+ +S LL G + +
Sbjct: 259 DVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKC 318
Query: 114 VFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ +Q+ + ++ ++ Y + + AR F+ + +++++SW+ M++GY +G+
Sbjct: 319 IHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGH 378
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVSWN 220
A IF+ M N I++ +LAA G +++ M V +
Sbjct: 379 GQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYG 438
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFE 271
++ + L +A + M V+ D W +++ +N LAE A+RLFE
Sbjct: 439 CMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFE 494
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 425 GKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G+QLH ++ G F + F +ALL MY C +A AF+EI + + M +GY
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG-TEYFYSMNRDYGVIPN 542
R+ +L LF + G +++ + + + G T +++ G+ +
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 543 SKHYTCMVDLLGRAGRLD--EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ M+D + GR D A+ + M E D +W +++ LY + ++ A
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTM--EKDVVSWNSMIA---LYAQNGMSADA 279
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 271/748 (36%), Positives = 386/748 (51%), Gaps = 107/748 (14%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N ++S +VR L A +F M +RD+ SWN ++ GYA+ GY D A ++ RML
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRML----- 187
Query: 187 SWNGL----------------LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
W G+ L + + + + +++ +VV N+L+ +VK
Sbjct: 188 -WVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVV--NALITMYVKCG 244
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVS 286
+ A+ +FDRMP RD +SWN MI+GY +N+ E RLF E D+ T T+++S
Sbjct: 245 DIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVIS 304
Query: 287 ---------------GYV-QNGKV-------------------DEARMIFDAMPEKNTVS 311
GYV + G V DEA M+F M K+ VS
Sbjct: 305 ACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVS 364
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVAS----------------------------- 342
W AMI+GY + + A E + M + V
Sbjct: 365 WTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFAD 424
Query: 343 ----------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
N++I Y++ I A +F R+P + ISW +II G + S ++L
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF 484
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
F +M + N SVLS CA + +L GK++H ++ G F+ NALL MY
Sbjct: 485 FFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYV 543
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+CG +E A++ F +KDV SWN ++ GYA+ G G A+ LF M + PD+IT
Sbjct: 544 RCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTS 602
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+L ACS +G+V G EYF SM + + PN KHY +VDLLGRAGRL++A +K MP +
Sbjct: 603 LLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPID 662
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
PD A WGALL ACR+Y EL E AA+ IFEM+ ++ G Y+LL NLYA SG+W +V++VR
Sbjct: 663 PDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVR 722
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
MR+ + G SW+EV +VH F GD HP+ I A LE K++ G S
Sbjct: 723 KIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKD 782
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
D+ + K + HSE+LA+A+G+++ G PI V KNL +CE+CHN +K ISK+V
Sbjct: 783 SRRDDI-DASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVV 841
Query: 753 GRLIILRDNNRFHHFSGGSCSCGD--YW 778
R I +RD +FHHF G CSCGD YW
Sbjct: 842 RRGISVRDTEQFHHFKDGVCSCGDEGYW 869
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 191/430 (44%), Gaps = 74/430 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N IT +++ G SA VF+ MPRR +S+NAMISGY N ++F M
Sbjct: 229 DVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMR 288
Query: 120 Q----RDLVSWNVMIS---------------GYVRNKSLSA------------------- 141
+ DL++ +IS GYV A
Sbjct: 289 EFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWD 348
Query: 142 -ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A +F M +D+VSW M+SGY +NG + A + M + +EI+ +L+A
Sbjct: 349 EAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACA 408
Query: 197 QNGRIEEACMLFESKANWEVVSW----NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
G +++ ML E + S+ NSL+ + K + + A +F R+P ++ +SW +
Sbjct: 409 GLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTS 468
Query: 253 MITGYAQNNYLAEAQRLFEEAPVK---DVFTWTAMVSGYVQNGKVDEARMI--------- 300
+I G N EA F++ + + T +++S + G + + I
Sbjct: 469 IILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGL 528
Query: 301 -FDA-MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
FD +P NA++ YV+ RM+ A F + K+VASWN ++TGYAQ G+
Sbjct: 529 GFDGFLP-------NALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGL 580
Query: 359 ARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVL 413
A LF +M + D I++ +++ ++SG D L F M+ ++ N + SV+
Sbjct: 581 AVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVV 640
Query: 414 STCANLASLE 423
LE
Sbjct: 641 DLLGRAGRLE 650
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++I G E +L M+ + + ++L C + G ++H + K
Sbjct: 64 SLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT 123
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G +GNALL M+ + G + EA++ F ++ ++D+ SWN ++ GYA+ G+ +AL L+
Sbjct: 124 VTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLY 183
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
M VGI+PD T +L C + +G E + R YG + ++ + +
Sbjct: 184 HRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR-YGFESDVDVVNALITMYVK 242
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
G + A+ + MP D +W A++ Y + ++ + + F M
Sbjct: 243 CGDIFSARLVFDRMP-RRDRISWNAMISG---YFENDVCLEGLRLFFMM 287
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 261/740 (35%), Positives = 388/740 (52%), Gaps = 57/740 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFD--QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
NA+I+ Y G L AR +FD M + D VSWN +IS +V A +LF M +
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVG 243
Query: 154 VVS----WNTMLSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEAC 205
V S + L G + I L+ N + N L+A Y + GR+E+A
Sbjct: 244 VASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAE 303
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVS------------ 249
+F S + VSWN+L+ G V+ + DA F M D+VS
Sbjct: 304 RVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSG 363
Query: 250 -----------------------WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
NT+I YA+ + FE KD+ +WT +++
Sbjct: 364 NLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIA 423
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMARELFEAMTCKNVAS 342
GY QN EA +F + K MI ++ K + RE+ + +++A
Sbjct: 424 GYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLAD 483
Query: 343 ---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N ++ Y + G +AR F+ + D +SW ++I +G ++L LF +K+
Sbjct: 484 IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
+ + S LS ANL+SL+ GK++HG L++ GF + ++L+ MY CG+VE
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
+ F + +D+I W +MI HG G +A+ LF+ M + PD IT + +L ACSH
Sbjct: 604 SRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSH 663
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+GL+ +G +F M Y + P +HY CMVDLL R+ L+EA +++MP +P + W
Sbjct: 664 SGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWC 723
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
ALLGAC ++ EL E AA+ + + + +N+G Y L+SN++AA GRW DV +VRL+M+ G
Sbjct: 724 ALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNG 783
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL-KQDGFVYSTKLVLHDV 698
+KK G SW+EV NK+HTF D HP+ D IY L + L K+ G++ TK V H+V
Sbjct: 784 LKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNV 843
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
EEEK ML HSE+LA+ YG+L P G IR+ KNLR+C+DCH K S++ R +++
Sbjct: 844 SEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVV 903
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD NRFHHF G CSCGD+W
Sbjct: 904 RDANRFHHFERGLCSCGDFW 923
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 216/470 (45%), Gaps = 61/470 (12%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----D 246
LL Y + G +++A +F+ + +WN++MG FV + +A ++ M V D
Sbjct: 85 LLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAID 144
Query: 247 EVSWNTMIT---GYAQNNYLAEAQRLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMIFD 302
++ +++ ++ AE + + + VF A+++ Y + G + AR++FD
Sbjct: 145 ACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFD 204
Query: 303 A--MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS------------------ 342
M +++TVSWN++I+ +V + A LF M VAS
Sbjct: 205 GIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFV 264
Query: 343 ---------------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
N +I YA+ G + A +F M D +SW +++G
Sbjct: 265 KLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGL 324
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
Q+ D+L F +M+ ++ ++ ++++ +L GK++H ++ G ++
Sbjct: 325 VQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNM 384
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
+GN L+ MY KC V+ +AFE + +KD+ISW T+IAGYA++ +A+ LF ++
Sbjct: 385 QIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVK 444
Query: 502 GIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+ D + + +L ACS GL + + Y RD I +V++ G G
Sbjct: 445 GMDVDPMMIGSVLRACS--GLKSRNFIREIHGYVFKRDLADIMLQ---NAIVNVYGEVGH 499
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
D A+ +++ D +W +++ C G L +A E+ + ++ N
Sbjct: 500 RDYARRAFESIR-SKDIVSWTSMITCCVHNG---LPVEALELFYSLKQTN 545
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 43/347 (12%)
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
F T ++ Y + G + +A +FD M E+ +WNAM+ +V + + A EL++ M
Sbjct: 80 FLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVL 139
Query: 339 NVA---------------------------------------SWNTMITGYAQSGEITHA 359
VA N +I Y + G++ A
Sbjct: 140 GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGA 199
Query: 360 RNLFD--RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
R LFD M + D +SW +II+ + G ++L LF M+ G N F + L
Sbjct: 200 RVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVE 259
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ + ++LG +HG +K A +V NAL+ MY KCG +E+A F ++ +D +SWNT
Sbjct: 260 DPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNT 319
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+++G ++ +DAL F M+ KPD ++++ +++A +G + G E R+
Sbjct: 320 LLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRN- 378
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G+ N + ++D+ + + + M E D +W ++
Sbjct: 379 GLDSNMQIGNTLIDMYAKCCCVKHMGYAFECM-HEKDLISWTTIIAG 424
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 136/292 (46%), Gaps = 28/292 (9%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G + A +FD M + +W A++ + SG +++ L+ EM+ G ++ F
Sbjct: 89 YEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTF 148
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV- 468
SVL C L LG ++HG VK GF FV NAL+ MY KCG + A F+ I+
Sbjct: 149 PSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMM 208
Query: 469 -DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+D +SWN++I+ + G +AL LF M+ VG+ + T V L V+ G
Sbjct: 209 EKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGM 268
Query: 528 EYFYSMNRDYGVIPNSKHYT------CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+G S H+ ++ + + GR+++A+ + +M D +W L
Sbjct: 269 GI-------HGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM-LCRDYVSWNTL 320
Query: 582 LGACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLSNLYAASGRWGDV 628
L + EL A +M+ P+ V + NL AASGR G++
Sbjct: 321 LSG---LVQNELYRDALNYFRDMQNSAQKPDQ----VSVLNLIAASGRSGNL 365
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 190/437 (43%), Gaps = 44/437 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N I + + G + A VF SM R VS+N ++SG + N A F M
Sbjct: 282 DVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQ 341
Query: 119 ---PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYAD 171
+ D VS +I+ R+ +L + + + + S NT++ YA+
Sbjct: 342 NSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVK 401
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
F+ M EK+ ISW ++A Y QN EA LF K + + + +M G V +
Sbjct: 402 HMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFR-KVQVKGMDVDPMMIGSVLRAC 460
Query: 232 LGDAK---------WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
G ++F R + D + N ++ Y + + A+R FE KD+ +WT
Sbjct: 461 SGLKSRNFIREIHGYVFKR-DLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWT 519
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+M++ V NG EA +F ++ + N +++ + ++ + +E+ + K
Sbjct: 520 SMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK 579
Query: 339 N------VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+AS +++ YA G + ++R +F + Q D I W ++I G +++
Sbjct: 580 GFFLEGPIAS--SLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIA 637
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-------GCFVGN 445
LF +M + F ++L C++ + GK+ +++K G++ C V
Sbjct: 638 LFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFF-EIMKYGYQLEPWPEHYACMVD- 695
Query: 446 ALLVMYCKCGSVEEAYH 462
+ + S+EEAY
Sbjct: 696 ----LLSRSNSLEEAYQ 708
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L C + +L G+QLH +L+K A F+ LL MY KCGS+++A F+E+ ++
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YF 530
+ +WN M+ + G +A+ L++ M+ +G+ D T +L AC G G E +
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 531 YSMNRDYGVIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEP-DAATWGALLGACRL 587
++ +G + C ++ + G+ G L A+ L + E D +W +++ A
Sbjct: 170 VAVKCGFGEFV----FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVT 225
Query: 588 YGK 590
GK
Sbjct: 226 EGK 228
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/536 (41%), Positives = 333/536 (62%), Gaps = 10/536 (1%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKN 308
+I Y + L A+ +F+E ++V +WTAM+SGY Q G EA +F M E N
Sbjct: 51 LIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPN 110
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKN----VASWNTMITGYAQSGEITHARNLFD 364
++ +++ ++ R++ + +N + ++++ YA++G I AR +F+
Sbjct: 111 EFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFE 170
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+P+ D +S AII+GYAQ G E++L LF ++R G N + S+L+ + LA+L+
Sbjct: 171 CLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDH 230
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GKQ+H +++ + N+L+ MY KCG++ A F + + VISWN M+ GY++
Sbjct: 231 GKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSK 290
Query: 485 HGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPN 542
HG G + + LF+ M+ +KPD +T + +LS CSH GL +KG E F M N +
Sbjct: 291 HGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAG 350
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY C++DLLGRAGR++EA L+K MPFEP AA WG+LLGACR++ T + E +
Sbjct: 351 IEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLL 410
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+EPENAG YV+LSNLYA++GRW DV VR M ++ V K G SW+E+ +HTF D
Sbjct: 411 EIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASD 470
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP ++ ++ + EL K K+ G+V VL+DV EE+KE +L HSEKLA+A+G++S
Sbjct: 471 RSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLIS 530
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G P+RV+KNLR+C DCHN K +SK+ GR + +RD NRFHH +GG CSCGDYW
Sbjct: 531 TSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 148/297 (49%), Gaps = 21/297 (7%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKN 184
+I Y + + L AR++F+ M +R+VVSW M+SGY+Q G+A A +F +ML E N
Sbjct: 51 LIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPN 110
Query: 185 EISWNGLLAAYVQNGRIEEACMLFES--KANWE--VVSWNSLMGGFVKQKRLGDAKWIFD 240
E ++ +L++ E + K N+E + +SL+ + K R+ +A+ +F+
Sbjct: 111 EFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFE 170
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDE 296
+P RD VS +I+GYAQ EA LF E + T+ ++++ +D
Sbjct: 171 CLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDH 230
Query: 297 ARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+ + + V N++I Y + ++ AR++F M + V SWN M+ GY++
Sbjct: 231 GKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSK 290
Query: 353 SGEITHARNLFDRMPQH-----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
G+ LF M + D +++ A+++G + G + L +F EM G+ +
Sbjct: 291 HGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEI 347
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 153/340 (45%), Gaps = 61/340 (17%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD----- 122
I + + C A HVF+ M R+ VS+ AMISGY G A +F QM + D
Sbjct: 52 IILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNE 111
Query: 123 -----LVSWNVMISG-----------------------------YVRNKSLSAARNLFEM 148
++S SG Y + + AR +FE
Sbjct: 112 FTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFEC 171
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY-----VQNG 199
+P+RDVVS ++SGYAQ G + A +F R+ + N +++ LL A + +G
Sbjct: 172 LPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHG 231
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+ + +L + + VV NSL+ + K L A+ IF+ MPVR +SWN M+ GY++
Sbjct: 232 KQVHSHVL-RCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSK 290
Query: 260 NNYLAEAQRLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKN 308
+ E +LF EE VK D T+ A++SG G D+ +FD M E
Sbjct: 291 HGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAG 350
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMI 347
+ +I + R++ A EL + M + A+ W +++
Sbjct: 351 IEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLL 390
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 182/397 (45%), Gaps = 39/397 (9%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSG 163
L AR VFD+M +R++VSW MISGY + S A +LF M + D ++ T+LS
Sbjct: 61 LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120
Query: 164 YAQNGYADAARR----IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
+ R+ IF R E + + LL Y + GRI EA +FE +VVS
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 180
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN--------TMITGYAQNNYLAEAQR--L 269
+++ G+ + +A +F R+ R+ +S N T ++G A ++ + L
Sbjct: 181 TAIISGYAQLGLDEEALELFCRLQ-REGMSSNYVTYASLLTALSGLAALDHGKQVHSHVL 239
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
E P V +++ Y + G ++ AR IF+ MP + +SWNAM+ GY + +
Sbjct: 240 RCELPFYVVLQ-NSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVV 298
Query: 330 ELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+LF+ M +N ++ +++G + G +FD M I AG
Sbjct: 299 KLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMN----GGDEIEAGIEHY 354
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFT-------SVLSTCANLASLELGKQLHGQLVKVGF 437
G D L ++ E + + PF S+L C ++ +G+ + +L+++
Sbjct: 355 GCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEP 414
Query: 438 E-AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
E AG +V L +Y G E+ + E +++K VI
Sbjct: 415 ENAGNYV--ILSNLYASAGRWEDVRNVRELMMEKAVI 449
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 118/229 (51%), Gaps = 12/229 (5%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M G + + +L+ C N ++ G+++H ++K + ++ L+++Y KC
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+ A H F+E+ +++V+SW MI+GY++ GF +AL LF M +P++ T +LS+
Sbjct: 61 LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120
Query: 517 CSHTGLVEKGTE---YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
C+ E G + + + N + + S ++D+ +AGR+ EA+ + + +P E
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSS----LLDMYAKAGRIHEARGVFECLP-ER 175
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN-AGMYVLLSNLYAA 621
D + A++ Y + L E+A E+ ++ E + YV ++L A
Sbjct: 176 DVVSCTAIISG---YAQLGLDEEALELFCRLQREGMSSNYVTYASLLTA 221
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 123/275 (44%), Gaps = 25/275 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D+ I+ + + G + AL +F + R + V+Y ++++ LD +QV
Sbjct: 176 DVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVH 235
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + +L V N +I Y + +L+ AR +F MP R V+SWN ML GY+++G
Sbjct: 236 SHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGI 295
Query: 172 AARRIFDRMLEKNE-----ISWNGLLAAYVQNGRIEEACMLFESKANW------EVVSWN 220
++F M E+N+ +++ +L+ G ++ +F+ N + +
Sbjct: 296 EVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYG 355
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEAPV 275
++ + R+ +A + +MP + W +++ N + E RL E P
Sbjct: 356 CVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEP- 414
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
++ + + + Y G+ ++ R + + M EK +
Sbjct: 415 ENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVI 449
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/646 (38%), Positives = 359/646 (55%), Gaps = 67/646 (10%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL-------------GDA 235
+ L Y R++ A +F++ + + V WN+L+ G + + DA
Sbjct: 153 SALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDGSVRPDA 212
Query: 236 KWIFDRMPVRDEVSWNTM---ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
+ +P EV+ TM + +A+ LAE + + T ++S Y + G
Sbjct: 213 TTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVL-----------TGLISLYSKCG 261
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF-EAMT--------------- 336
V+ AR +FD M + + V++NA+I+GY + + LF E MT
Sbjct: 262 DVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIP 321
Query: 337 -----------------------CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
N + T + + ++ AR FD MP+ S
Sbjct: 322 VHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMES 381
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A+I+GYAQ+G +E ++ LF +M + R N +S LS CA L +L LGK LH +
Sbjct: 382 WNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIIT 441
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+ E +V AL+ MY KCGS+ EA F + +K+V+SWN MIAGY HG G +AL
Sbjct: 442 EEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALK 501
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
L++ M + P T + +L ACSH GLVE+G + F SM DY + P +H TCMVDLL
Sbjct: 502 LYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLL 561
Query: 554 GRAGRLDEAQNLMKNMPFEP-DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
GRAG+L EA L+ P WGALLGAC ++ ++LA+ A++ +FE++PEN+G Y
Sbjct: 562 GRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYY 621
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSNL+ + ++ + + VR + + R + K GY+ +E+ NK H F GD HP+ + IY
Sbjct: 622 VLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIY 681
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
+YLE+L K+ + G+ T+ L+DV EEEKEHM++ HSEKLA+A+G+LS G IR++
Sbjct: 682 SYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRII 741
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLRVC DCHNA K ISK+ RLI++RD +RFHHF G CSCGDYW
Sbjct: 742 KNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 186/388 (47%), Gaps = 51/388 (13%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D F +A+ Y +VD AR +FD +P +TV WN ++AG ++ A E F M
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSE----AVESFARMV 203
Query: 337 CK------------------------------------NVASWNTMITG----YAQSGEI 356
C +A ++TG Y++ G++
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD M + D +++ A+I+GY+ +G S+ LF E+ G N S +++
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
+ L + LHG ++K GF A V A+ ++C+ +E A AF+ + +K + SWN
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
MI+GYA++G + A+ LFE M + ++P+ IT+ LSAC+ G + G ++ + + +
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLG-KWLHRIITE 442
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+ PN T ++D+ + G + EA+ + M + +W A++ L+G+ A K
Sbjct: 443 EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMD-NKNVVSWNAMIAGYGLHGQGAEALK 501
Query: 597 AAEVIFE--MEPENAGMYVLLSNLYAAS 622
+ + + + P +A LS LYA S
Sbjct: 502 LYKDMLDAHLLPTSA---TFLSVLYACS 526
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 156/389 (40%), Gaps = 118/389 (30%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA-------------A 142
+A+ Y + ++D AR+VFD +P D V WN +++G ++++ + A
Sbjct: 153 SALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDGSVRPDA 212
Query: 143 RNLFEMMPKRDVVSWNTM-----------------------LSGYAQNGYADAARRIFDR 179
L ++P V+ TM +S Y++ G ++AR +FD
Sbjct: 213 TTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDM 272
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLF----------ESKANWEVVSWNSLMG----- 224
M + + +++N L++ Y NG + + LF S ++ +S G
Sbjct: 273 MEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLA 332
Query: 225 ----GFVKQK-----------------RLGD---AKWIFDRMPVRDEVSWNTMITGYAQN 260
GFV + RL D A+ FD MP + SWN MI+GYAQN
Sbjct: 333 QCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQN 392
Query: 261 NYLAEAQRLFEEA--------PV-------------------------------KDVFTW 281
A LFE+ P+ +V+
Sbjct: 393 GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVM 452
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY----VQTKRMDMARELFEAMTC 337
TA++ Y + G + EAR IF+ M KN VSWNAMIAGY + + + +++ +A
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLL 512
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRM 366
A++ +++ + G + +F M
Sbjct: 513 PTSATFLSVLYACSHGGLVEEGWKVFRSM 541
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 51/294 (17%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQ- 120
I+ + + G +SA +F+ M + V+YNA+ISGY +NG + + +F ++ P
Sbjct: 254 ISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNS 313
Query: 121 --------------RDLVSWN----VMISGYVRNKSLS--------------AARNLFEM 148
DL++ V+ SG+ N +S +AR F+
Sbjct: 314 STLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDT 373
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEA 204
MP++ + SWN M+SGYAQNG + A +F++M++ N I+ + L+A Q G +
Sbjct: 374 MPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLG 433
Query: 205 C----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++ E V +L+ + K + +A+ IF+ M ++ VSWN MI GY +
Sbjct: 434 KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLH 493
Query: 261 NYLAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
AEA +L+++ + T+ +++ G V+E +F +M + +
Sbjct: 494 GQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAI 547
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 25/250 (10%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSG 163
++ AR+ FD MP++ + SWN MISGY +N A LFE M K +V ++ ++ LS
Sbjct: 364 MESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSA 423
Query: 164 YAQNGYADAA----RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
AQ G R I + LE N L+ Y + G I EA +F + N VVSW
Sbjct: 424 CAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSW 483
Query: 220 NSLMGGFVKQKRLGDA----KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--- 272
N+++ G+ + +A K + D + ++ +++ + + E ++F
Sbjct: 484 NAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTD 543
Query: 273 --APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---WNAMIAGYVQTKRMDM 327
A + T MV + G++ EA + P K+ V W A++ + K D+
Sbjct: 544 DYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFP-KSAVGPGVWGALLGACMVHKDSDL 602
Query: 328 AR----ELFE 333
A+ +LFE
Sbjct: 603 AKLASQKLFE 612
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 65 NVAITT-HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+ AITT H R +SA F++MP ++ S+NAMISGY NG + A +F+QM + ++
Sbjct: 351 STAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNV 410
Query: 124 ----VSWNVMISGYVRNKSLSAARNLFEMMPKRD----VVSWNTMLSGYAQNGYADAARR 175
++ + +S + +LS + L ++ + D V ++ YA+ G ARR
Sbjct: 411 RPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARR 470
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE---------SKANWEVVSWNSLMGGF 226
IF+ M KN +SWN ++A Y +G+ EA L++ + A + V + GG
Sbjct: 471 IFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGL 530
Query: 227 VKQKRLGDAKW-IFDRMPVRDEVSWNT-------MITGYAQNNYLAEAQRLFEEAPVKDV 278
V++ W +F M D+ + N M+ + L EA L E P V
Sbjct: 531 VEE------GWKVFRSM--TDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAV 582
Query: 279 --FTWTAMVSGYVQNGKVDEARM----IFDAMPEKN 308
W A++ + + D A++ +F+ PE +
Sbjct: 583 GPGVWGALLGACMVHKDSDLAKLASQKLFELDPENS 618
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVFD 116
+ WN I+ + +NG + A+ +F M R + ++ ++ +S G L + +
Sbjct: 379 MESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHR 438
Query: 117 QMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+ + DL +I Y + S+S AR +F M ++VVSWN M++GY +G
Sbjct: 439 IITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAE 498
Query: 173 ARRIFDRMLEKNEI----SWNGLLAAYVQNGRIEEACMLFESKAN 213
A +++ ML+ + + ++ +L A G +EE +F S +
Sbjct: 499 ALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTD 543
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/674 (37%), Positives = 378/674 (56%), Gaps = 53/674 (7%)
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
N L Y++ AARR+FD + N S+N L++AY + +E A LF+ + V
Sbjct: 47 NHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSV 106
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEA 273
S+N+L+ + ++ A +F M D + + +IT N L
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVV 166
Query: 274 PVKD--VFTWTAMVSGYVQNGKVDEARMIFDAMPE-KNTVSWNAMIAGYVQTKRMDMARE 330
D V A+++ Y +NG + EAR IF + E ++ VSWN+M+ Y+Q + A E
Sbjct: 167 TGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALE 226
Query: 331 LFEAMTCK-------NVASWNTMIT------------------GYAQS------------ 353
L+ MT + +AS T T GY Q+
Sbjct: 227 LYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYS 286
Query: 354 ---GEITHARNLFDRMPQHDCISWAAIIAGYA-QSGYSEDSLRLFIEMKRYGERLNRSPF 409
G + R +FD + D + W +I+GY+ S+++L F +++ G R +
Sbjct: 287 KCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSL 346
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIV 468
V+S C+N++S G+Q+HG +K+ + V NAL+ MY KCG++ +A F+ +
Sbjct: 347 VCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ + +S+N+MIAGYA+HG G +L LF+ M +G P +IT + +L+AC+HTG VE G
Sbjct: 407 EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKI 466
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF M + +G+ P + H++CM+DLLGRAG+L EA+ L++ +PF+P W ALLGACR++
Sbjct: 467 YFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIH 526
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
G ELA KAA + +++P NA YV+L+N+Y+ +GR D + VR MRDRGVKK G SW
Sbjct: 527 GNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSW 586
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL----HDVGEEEKE 704
+EV ++H F DT HP +I YLEE+ K+K+ G+ + L V + E+E
Sbjct: 587 IEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEE 646
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L +HSEKLAV++G++S G PI V KNLR+C DCHNAIK+IS++V R I +RD++RF
Sbjct: 647 LRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRF 706
Query: 765 HHFSGGSCSCGDYW 778
H F G CSCG YW
Sbjct: 707 HCFKDGQCSCGGYW 720
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 142/522 (27%), Positives = 234/522 (44%), Gaps = 99/522 (18%)
Query: 60 DIRQWNVAITTH--MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ RQ+ H +R G AL++ + +P + +S N + Y +L AR+VFD
Sbjct: 10 NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLS-NHFLLLYSKCRRLSAARRVFDH 68
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
++ S+N +IS Y + + A LF+ MP+ D VS+NT+++ YA+ G A ++F
Sbjct: 69 THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128
Query: 178 DRM----LEKNEISWNGLLAAY-VQNGRIEEACML-FESKANWEVVSWNSLMGGFVKQKR 231
M L+ + + +G++ A + G I + L + + V N+L+ + K
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 232 LGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMV- 285
L +A+ IF + RDEVSWN+M+ Y Q+ ++A L+ E V+ D+FT +++
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 286 --------------------SGYVQN-----GKVD----------EARMIFDAMPEKNTV 310
SGY QN G +D + R +FD + + V
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLV 308
Query: 311 SWNAMIAGYVQTKRM-DMARELFEAM-----------------TCKNVASW--------- 343
WN MI+GY + + D A E F + C N++S
Sbjct: 309 LWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGL 368
Query: 344 --------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
N +I Y++ G + A+ LFD MP+H+ +S+ ++IAGYAQ G
Sbjct: 369 ALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQ 428
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF----EAGCFVGN 445
SL LF M G F SVL+ CA+ +E GK ++ ++K F EAG F +
Sbjct: 429 SLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHF--S 485
Query: 446 ALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++ + + G + EA E I D W+ ++ HG
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHG 527
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 172/352 (48%), Gaps = 28/352 (7%)
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
F T + ++ GK A I +P +S N + Y + +R+ AR +F+
Sbjct: 14 FLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLS-NHFLLLYSKCRRLSAARRVFDHTHDC 72
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
NV S+NT+I+ YA+ + A LFD MPQ D +S+ +IA YA+ G ++ + +LF+EM+
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
++ + +++ C ++ L +QLH V G ++ VGNAL+ Y K G ++
Sbjct: 133 EAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190
Query: 459 EAYHAFEEIV-DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
EA F + D+D +SWN+M+ Y +H G AL L+ M G+ D T+ +L+A
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG--------RLDEAQNLMKNM 569
++ + G ++ + + G NS + ++DL + G DE N
Sbjct: 251 TNVQDLLGGLQFHAKLIKS-GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN----- 304
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLS 616
PD W ++ LY +L+++A E +++ P++ + ++S
Sbjct: 305 ---PDLVLWNTMISGYSLY--EDLSDEALECFRQLQVVGHRPDDCSLVCVIS 351
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 138/599 (23%), Positives = 241/599 (40%), Gaps = 131/599 (21%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRH---LNSKSRNKPKP------AG 57
RQ +CI H+ ++ L + + P+ L H L SK R
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ +N I+ + + + A +F+ MP+ SVSYN +I+ Y G PA Q+F +
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAA--RNLFEMMPKRDVVSW----NTMLSGYAQNGYAD 171
M + L +SG + ++ R L + + S+ N +++ Y++NG+
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190
Query: 172 AARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLFESKAN----WEVVSWNSLMGGF 226
ARRIF + E ++E+SWN ++ AY+Q+ +A L+ ++ + S++ F
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250
Query: 227 VK-QKRLG-----------------------------------DAKWIFDRMPVRDEVSW 250
Q LG D + +FD + D V W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310
Query: 251 NTMITGYAQNNYLA-EAQRLFEE------------------------------------- 272
NTMI+GY+ L+ EA F +
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370
Query: 273 ---APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
P + A+++ Y + G + +A+ +FD MPE NTVS+N+MIAGY Q +
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSL 430
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
LF+ M + G+ + I++ +++A A +G ED
Sbjct: 431 HLFQRM----------LEMGFTPTN-----------------ITFISVLAACAHTGRVED 463
Query: 390 SLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
F MK ++G F+ ++ L ++L + + F+ G F +ALL
Sbjct: 464 GKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL---IETIPFDPGFFFWSALL 520
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWN--TMIAG-YARHGFGKDALMLFESMKTVGIK 504
G+VE A A ++ D ++ M+A Y+ +G +DA + + M+ G+K
Sbjct: 521 GACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVK 579
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 39/228 (17%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F L TC L GK LH +K ++ N L++Y KC + A F+
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 469 DKDVISWNTMI-------------------------------AGYARHGFGKDALMLFES 497
D +V S+NT+I A YAR G + A LF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 498 MKTVGIKPDDITMVGILSACS-HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M+ + D T+ GI++AC + GL+ + ++++ G+ ++ +
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQ----LHALSVVTGLDSYVSVGNALITSYSKN 186
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
G L EA+ + + + D +W +++ A Y + KA E+ EM
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVA---YMQHREGSKALELYLEM 231
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/541 (41%), Positives = 330/541 (60%), Gaps = 1/541 (0%)
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
RDV N + ++ G DAAR++FD M K+ ++WN +L+AY QNG ++ + LF S
Sbjct: 27 RDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSM 86
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
VVSWNS++ V+ L DA P ++ S+N +I+G A+ + +AQRLFE
Sbjct: 87 PLRNVVSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRLFE 146
Query: 272 EAPVKDVFTWTAMVSGYVQ-NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
P +V ++TAMV GY + G + AR +F+AMP +N+VSW MI G V+ + A E
Sbjct: 147 AMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEAWE 206
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
+F M KN + MITG+ + G + AR+LF + D +SW I+ GYAQ+G E++
Sbjct: 207 VFVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEA 266
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L LF +M R G + + F SV CA+LASLE G + H L+K GF++ V NAL+ +
Sbjct: 267 LNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITV 326
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
+ KCG + ++ F +I D++SWNT+IA +A+HG A F+ M TV ++PD IT
Sbjct: 327 HSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGITF 386
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+ +LSAC G V + F M +YG+ P S+HY C+VD++ RAG+L A ++ MP
Sbjct: 387 LSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSRAGQLQRACKIINEMP 446
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
F+ D++ WGA+L AC ++ EL E AA I ++P N+G YV+LSN+YAA+G+W DV +
Sbjct: 447 FKADSSIWGAVLAACSVHLNVELGELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHR 506
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
+R+ M+++GVKK T YSWL++ NK H F GD HP + I+ L + +K FV S
Sbjct: 507 IRVLMKEQGVKKQTAYSWLQIGNKTHYFVGGDPSHPNINDIHVALRRITLHMKVKDFVAS 566
Query: 691 T 691
+
Sbjct: 567 S 567
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 228/499 (45%), Gaps = 87/499 (17%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G++D AR++FD+M +D+V+WN M+S Y +N L ++ LF MP R+VVSWN++++
Sbjct: 43 GKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSMPLRNVVSWNSIIAACV 102
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
QN A R EKN S+N +++ + GR+++A LFE+ VVS+ +++ G
Sbjct: 103 QNDNLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRLFEAMPCPNVVSYTAMVDG 162
Query: 226 FVK-QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
+ + + +G A+ +F+ MP R+ VSW MI G +N EA +F P K+ TAM
Sbjct: 163 YARVEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEAWEVFVRMPQKNDVARTAM 222
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--------- 335
++G+ + G++++AR +F + ++ VSWN ++ GY Q R + A LF M
Sbjct: 223 ITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDD 282
Query: 336 --------TCKNVASW----------------------NTMITGYAQSGEITHARNLFDR 365
C ++AS N +IT +++ G I + +F +
Sbjct: 283 LTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQ 342
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
+ D +SW IIA +AQ G + + F +M + + F S+LS C
Sbjct: 343 ISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSAC--------- 393
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS-----WNTMIA 480
C+ G V E+ + F +VD I + ++
Sbjct: 394 --------------------------CRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVD 427
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
+R G + A + M K D +L+ACS VE G + R +
Sbjct: 428 VMSRAGQLQRACKIINEMP---FKADSSIWGAVLAACSVHLNVELGE---LAARRILNLD 481
Query: 541 P-NSKHYTCMVDLLGRAGR 558
P NS Y + ++ AG+
Sbjct: 482 PFNSGAYVMLSNIYAAAGK 500
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 172/344 (50%), Gaps = 49/344 (14%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
+F +MPRR+SVS+ MI+G + NG + A +VF +MPQ++ V+ MI+G+ + + A
Sbjct: 176 LFEAMPRRNSVSWVVMINGLVENGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMEDA 235
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQN 198
R+LF+ + RD+VSWN +++GYAQNG + A +F +M+ + +++++ + A
Sbjct: 236 RDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASL 295
Query: 199 GRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
+EE +L + + ++ N+L+ K + D++ +F ++ D VSWNT+I
Sbjct: 296 ASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTII 355
Query: 255 TGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+AQ+ +A+ F++ D T+ +++S + GKV+E+ +F
Sbjct: 356 AAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLF--------- 406
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QH 369
+ M+ Y R + L + M+ ++G++ A + + MP +
Sbjct: 407 --SLMVDNYGIPPRSEHYACLVDVMS---------------RAGQLQRACKIINEMPFKA 449
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER--LNRSPFTS 411
D W A++A S+ L +E+ R LN PF S
Sbjct: 450 DSSIWGAVLAAC--------SVHLNVELGELAARRILNLDPFNS 485
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 58 DWDIRQWNVAITTHMR-NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D D+ N IT H + G DS L VF + VS+N +I+ + +G D AR FD
Sbjct: 314 DSDLSVCNALITVHSKCGGIVDSEL-VFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFD 372
Query: 117 QM----PQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQ 166
QM Q D +++ ++S R ++ + NLF +M P R + ++ ++
Sbjct: 373 QMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRS-EHYACLVDVMSR 431
Query: 167 NGYADAARRIFDRMLEKNEIS-WNGLLAA 194
G A +I + M K + S W +LAA
Sbjct: 432 AGQLQRACKIINEMPFKADSSIWGAVLAA 460
>gi|302767812|ref|XP_002967326.1| hypothetical protein SELMODRAFT_30579 [Selaginella moellendorffii]
gi|300165317|gb|EFJ31925.1| hypothetical protein SELMODRAFT_30579 [Selaginella moellendorffii]
Length = 569
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/568 (39%), Positives = 337/568 (59%), Gaps = 4/568 (0%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN IT + +NG A +F MP R+ VS+NA+I G A++VFD MP
Sbjct: 1 DLVAWNAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAIIDGCAQGQDEALAKKVFDSMP 60
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
QR++VSW M++ Y ++ L AR L MP ++VSWN M+ +A N + A+ FDR
Sbjct: 61 QREVVSWTAMVATYSQSGRLEEARALLSKMPALNIVSWNVMIQAFADNLLVEDAKERFDR 120
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK--QKRLGDAKW 237
E + +SWN ++ AY Q +I A F+ +VVSW +++ + + Q + AK
Sbjct: 121 APEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRDVVSWATMIQSYAQEGQPSMDQAKE 180
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
IFDR P R+ VSWN MITGY+ + + +A+ +F+ P KDV +W A+V+GY+QN ++ EA
Sbjct: 181 IFDRAPQRNVVSWNVMITGYSASGRIKQAKAVFDTMPQKDVISWAALVAGYLQNQQLAEA 240
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ +FD MP N V N ++A + RM R LF+ M + +ASW+TM+ GYAQSG
Sbjct: 241 KRVFDRMPATNAVCCNTVMASFAGADRMPETRSLFDRMPERTLASWSTMLGGYAQSGHTA 300
Query: 358 HARNLFDRMPQ--HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
A++ FDRMPQ HD +SW A+IAG+ +G E +L+LF+EM R G + + + S L+
Sbjct: 301 SAKSFFDRMPQRDHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYASALAA 360
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA LASL + +H +L K G E FV NAL+ Y K G + +A F+ + DV++W
Sbjct: 361 CAGLASLGAARDIHWRLCKAGLETDAFVHNALVDFYGKSGRMADAELVFQSLASVDVVTW 420
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N + AG++R G + + L ++K G++PD IT + +L+A H GLV+ G F +M
Sbjct: 421 NALAAGFSRQGSYRLVVDLLWAIKDQGLEPDGITFLALLAAYGHAGLVDHGRRAFAAMVE 480
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
Y + +HY C+VD+LGRA RL+EA + MP P + TW +L C + ++A
Sbjct: 481 SYRIEAGIEHYHCLVDMLGRANRLEEALAEVAAMPHRPSSVTWTTVLSTCVKWKNLDVAS 540
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASG 623
A E + ++P+ YVL++N+Y ++G
Sbjct: 541 VAFESLLGIDPDGPAAYVLMANVYGSAG 568
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 18/244 (7%)
Query: 46 NSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISG 101
++KS P D D+ WN I H+ NG + AL +F M RR SY + ++
Sbjct: 301 SAKSFFDRMPQRDHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYASALAA 360
Query: 102 YLLNGQLDPARQVFDQM----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
L AR + ++ + D N ++ Y ++ ++ A +F+ + DVV+W
Sbjct: 361 CAGLASLGAARDIHWRLCKAGLETDAFVHNALVDFYGKSGRMADAELVFQSLASVDVVTW 420
Query: 158 NTMLSGYAQNG----YADAARRIFDRMLEKNEISWNGLLAAY-----VQNGRIEEACMLF 208
N + +G+++ G D I D+ LE + I++ LLAAY V +GR A M+
Sbjct: 421 NALAAGFSRQGSYRLVVDLLWAIKDQGLEPDGITFLALLAAYGHAGLVDHGRRAFAAMVE 480
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQ 267
+ + ++ L+ + RL +A MP R V+W T+++ + L A
Sbjct: 481 SYRIEAGIEHYHCLVDMLGRANRLEEALAEVAAMPHRPSSVTWTTVLSTCVKWKNLDVAS 540
Query: 268 RLFE 271
FE
Sbjct: 541 VAFE 544
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/557 (41%), Positives = 338/557 (60%), Gaps = 17/557 (3%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSG----Y 288
IFDR+ + WNTM+ Y Q+N AE L + VK D +T+ +V
Sbjct: 85 IFDRIENSNGFMWNTMMRAYIQSNS-AEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 143
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
++ G + + + + N +I Y M AR+LF+ + SWN+++
Sbjct: 144 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 203
Query: 349 GYAQSG---EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
GY + G ++ A LF+ M + D +SW+A+I+GY Q+G E++L +FIEM G RL+
Sbjct: 204 GYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLD 263
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC----KCGSVEEAY 461
SVLS CA+L+ ++ GK +HG ++++G E+ + NAL+ MY KCG VE A
Sbjct: 264 EVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENAL 323
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F + +K V SWN +I G A +G + +L +F MK G+ P++IT +G+L AC H G
Sbjct: 324 EVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG 383
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV++G +F SM +G+ PN KHY CMVDLLGRAG L+EA+ L+++MP PD ATWGAL
Sbjct: 384 LVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGAL 443
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGAC+ +G TE+ E+ + E++P++ G +VLLSN++A+ G W DV +VR M+ +GV
Sbjct: 444 LGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVV 503
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G S +E VH F GD HP +++ L E+ +LK +G+ T V D+ EE
Sbjct: 504 KTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEE 563
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EKE L HSEKLA+A+G+L+I PIR+MKNLR+C DCH A K ISK R I++RD
Sbjct: 564 EKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDR 623
Query: 762 NRFHHFSGGSCSCGDYW 778
+RFH+F G+CSC DYW
Sbjct: 624 HRFHYFKEGACSCMDYW 640
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 174/404 (43%), Gaps = 56/404 (13%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSG 163
LD + Q+FD++ + WN M+ Y+++ S A L+++M K +V ++ ++
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 164 YAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
A + I D +L + + N L+ Y G + +A LF+ + VSW
Sbjct: 139 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 198
Query: 220 NSLMGGFVKQKRLG---DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
NS++ G+VK+ +G +A +F+ M +D VSW+ +I+GY QN EA +F E
Sbjct: 199 NSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN 258
Query: 277 ----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW----NAMI----AGYVQTKR 324
D +++S V +MI + S+ NA+I Y++
Sbjct: 259 GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGC 318
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
++ A E+F M K V+SWN +I G A +G +
Sbjct: 319 VENALEVFNGMEEKGVSSWNALIIGLAVNGLV---------------------------- 350
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFV 443
E SL +F EMK G N F VL C ++ ++ G+ ++ K G E
Sbjct: 351 ---ERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKH 407
Query: 444 GNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++ + + G + EA E + + DV +W ++ +HG
Sbjct: 408 YGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 451
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 173/370 (46%), Gaps = 34/370 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA---ARNLFEMMPKR 152
N +I+ Y + G + AR++FD+ P D VSWN +++GYV+ + A LF M ++
Sbjct: 168 NTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEK 227
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEE 203
D+VSW+ ++SGY QNG + A +F M + +E+ +L+A V+ G++
Sbjct: 228 DMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIH 287
Query: 204 ACML---FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++ ES N + + ++K + +A +F+ M + SWN +I G A N
Sbjct: 288 GLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVN 347
Query: 261 NYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA-- 314
+ + +F E + + T+ ++ G VDE R F +M EK+ + N
Sbjct: 348 GLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKH 407
Query: 315 ---MIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEITH----ARNLFDRM 366
M+ + ++ A +L E+M +VA+W ++ + G+ R L +
Sbjct: 408 YGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQ 467
Query: 367 PQHDCISWAAIIAG-YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
P HD + +++ +A G ED L + MK+ G + ++P S++ + G
Sbjct: 468 PDHD--GFHVLLSNIFASKGDWEDVLEVRGMMKQQG--VVKTPGCSLIEANGVVHEFLAG 523
Query: 426 KQLHGQLVKV 435
+ H + KV
Sbjct: 524 DKTHPWINKV 533
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 139/289 (48%), Gaps = 45/289 (15%)
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ ++ +FDR+ + W ++ Y QS +E +L L+ M + + + V+
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 416 CANLASLEL-GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS------------------ 456
CA + LE GK++H ++KVGF++ +V N L+ MY CG+
Sbjct: 139 CA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 197
Query: 457 ----------------VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
V EA+ F E+ +KD++SW+ +I+GY ++G ++AL++F M
Sbjct: 198 WNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 257
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV----DLLGRA 556
G++ D++ +V +LSAC+H +V+ G + + + G+ ++ D+ +
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMYSDMYMKC 316
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
G ++ A + M E ++W AL+ + G L E++ ++ EM+
Sbjct: 317 GCVENALEVFNGME-EKGVSSWNALIIGLAVNG---LVERSLDMFSEMK 361
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
+M+ GC ++AL VFN M + S+NA+I G +NG ++ + +F +M ++ +
Sbjct: 313 YMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITF 372
Query: 131 SGYV---RNKSL-SAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARRIFDRM- 180
G + R+ L R F M ++ +V + M+ + G + A ++ + M
Sbjct: 373 MGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMP 432
Query: 181 LEKNEISWNGLLAAYVQNGRIE 202
+ + +W LL A ++G E
Sbjct: 433 MAPDVATWGALLGACKKHGDTE 454
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/728 (33%), Positives = 396/728 (54%), Gaps = 31/728 (4%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A HVF+ +P+ S V +N MI Y +G + ++ M Q + N ++ S
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 140 SAARNLFEMMPKR--------DVVSWNTMLSGYAQNGYADAARRIFDRM--LEKNEISWN 189
A L ++ D+ +L YA+ G+ A+ +F+ + +++ ++WN
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179
Query: 190 GLLAAY----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI---FDRM 242
++AA+ + I + ++ + S++ + L K I + R
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239
Query: 243 PVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
D V T ++ YA+ + L A+++F K+ W+AM+ GYV + + +A ++
Sbjct: 240 FFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALY 299
Query: 302 DAM-------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGY 350
D M P T++ M+ Q + ++L M + N++I+ Y
Sbjct: 300 DDMLCIYGLNPTPATLA--TMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMY 357
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A+ G + +A D M D +S++AII+G Q+GY+E +L +F +M+ G
Sbjct: 358 AKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMI 417
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
++L C++LA+L+ G HG V GF + NA++ MY KCG + + F+ + ++
Sbjct: 418 ALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNR 477
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D+ISWNTMI GY HG +AL LF+ ++ +G+KPDD+T++ +LSACSH+GLV +G +F
Sbjct: 478 DIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWF 537
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
SM++++ + P HY CMVDLL RAG LDEA ++ MPF P+ WGALL ACR +
Sbjct: 538 SSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKN 597
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
E+ E+ ++ I + PE G +VL+SN+Y++ GRW D + +R R G KK G SW+E
Sbjct: 598 IEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVE 657
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
+ +H F G HP+ I L+EL ++K+ G+ + VLHDV EEEKE +L YH
Sbjct: 658 ISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYH 717
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SEK+A+A+GIL+ I V KNLR+C DCH+AIK I+ + R I +RD +RFHHF G
Sbjct: 718 SEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDG 777
Query: 771 SCSCGDYW 778
C+C D+W
Sbjct: 778 ICNCQDFW 785
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 7/266 (2%)
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
EI AR++FD++P+ + W +I YA SG + S+ L++ M + G F +L
Sbjct: 56 EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLK 115
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV--DKDV 472
C++L +L+LG+ +H +G +V ALL MY KCG + +A F I D+D+
Sbjct: 116 ACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
++WN MIA ++ H + M+ G+ P+ T+V IL + +G
Sbjct: 176 VAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAY 235
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
R++ N T ++D+ + L A+ + + + D W A++G L+
Sbjct: 236 YIRNF-FFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVC-WSAMIGGYVLHDSIS 293
Query: 593 LAEKAAE---VIFEMEPENAGMYVLL 615
A + I+ + P A + +L
Sbjct: 294 DALALYDDMLCIYGLNPTPATLATML 319
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 49/252 (19%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D N I+ + + G D+A+ + M + +VSY+A+ISG + NG + A
Sbjct: 340 KSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALL 399
Query: 114 VFDQMPQRDLVSW---------------------------------------NVMISGYV 134
+F QM + + N +I Y
Sbjct: 400 IFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYS 459
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
+ ++ +R +F+ M RD++SWNTM+ GY +G A +F + L+ ++++
Sbjct: 460 KCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIA 519
Query: 191 LLAAYVQNGRIEEACMLFESKA-NWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+L+A +G + E F S + N+ + + ++ + L +A RMP
Sbjct: 520 VLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFV 579
Query: 246 DEVS-WNTMITG 256
V W ++
Sbjct: 580 PNVRIWGALLAA 591
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/707 (35%), Positives = 388/707 (54%), Gaps = 59/707 (8%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+I+ Y + A + + +P V S+++++ + + +F RM I
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 189 NGLL----------AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+L +A+ +I C+ S + + SL +++ R+GDA+ +
Sbjct: 116 THVLPNLFKVCAELSAFKAGKQIH--CVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKV 173
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKV 294
FDRM +D V+ + ++ GYA+ L E R+ E ++ +W ++SG+ ++G
Sbjct: 174 FDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYH 233
Query: 295 DEARMIFDAM------PEKNTVS-------------WNAMIAGYVQ-----------TKR 324
EA ++F M P++ TVS I GYV +
Sbjct: 234 KEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAM 293
Query: 325 MDM---------ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DC 371
+DM +LF+ N ITG +++G + A +F + +
Sbjct: 294 LDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNV 353
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+SW +IIAG AQ+G ++L LF EM+ G + NR S+L C N+A+L G+ HG
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
V+V VG+AL+ MY KCG ++ + F + K+++ WN+++ GY+ HG K+
Sbjct: 414 AVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEV 473
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
+ +FES+ +KPD I+ +LSAC GL ++G +YF M+ +YG+ P +HY+CMV+
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVN 533
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG+L EA +L+K +PFEPD+ WGALL +CRL +LAE AA+ +F +EPEN G
Sbjct: 534 LLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGT 593
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVL+SN+YAA G W +V +R KM G+KK G SW++V+NKV+T D HP+ D+I
Sbjct: 594 YVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQI 653
Query: 672 YAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
++E+ ++++ G + L DV E+E+E ML HSEKLAV +G+L+ P G P++V
Sbjct: 654 TEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQV 713
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLR+C DCH IK IS GR I +RD NRFHHF G CSCGD+W
Sbjct: 714 IKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 198/447 (44%), Gaps = 85/447 (19%)
Query: 91 SSVSYNAMISG-----YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNL 145
S + +A + G Y+ G++ AR+VFD+M ++D+V+ + ++ GY R L +
Sbjct: 145 SGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRI 204
Query: 146 FEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ 197
M K ++VSWN +LSG+ ++GY A +F +M ++++ + +L
Sbjct: 205 LSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLP---- 260
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
S + E ++ + G+V ++ L ++D+ + M+ Y
Sbjct: 261 ------------SVGDSENLNMGRQIHGYVIKQGL-----------LKDKCVISAMLDMY 297
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWN 313
++ ++ +LF+E + + A ++G +NG VD+A +F E+ N VSW
Sbjct: 298 GKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWT 357
Query: 314 AMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW------------- 343
++IAG Q + A ELF M C N+A+
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 344 ---------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+ +I YA+ G I ++ +F+ MP + + W +++ GY+ G +++ + +F
Sbjct: 418 HLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIF 477
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCK 453
+ R + + FTS+LS C + + G K + + G + + ++ + +
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGR 537
Query: 454 CGSVEEAYHAFEEI-VDKDVISWNTMI 479
G ++EAY +EI + D W ++
Sbjct: 538 AGKLQEAYDLIKEIPFEPDSCVWGALL 564
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 152/361 (42%), Gaps = 67/361 (18%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSW 126
+MR G A VF+ M + V+ +A++ GY G L+ ++ +M + ++VSW
Sbjct: 161 YMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSW 220
Query: 127 NVMISGYVRNKSLSAARNLFEMM------PKRDVVS------------------------ 156
N ++SG+ R+ A +F+ M P + VS
Sbjct: 221 NGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIK 280
Query: 157 ---------WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV----QNGRIEE 203
+ ML Y ++G+ ++FD E+ G+ AY+ +NG +++
Sbjct: 281 QGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEF----EMMETGVCNAYITGLSRNGLVDK 336
Query: 204 ACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMIT 255
A +F E K VVSW S++ G + + +A +F M V + V+ +M+
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396
Query: 256 GYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
L + A + DV +A++ Y + G++ ++++F+ MP KN V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVC 456
Query: 312 WNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
WN+++ GY + +FE++ + S+ ++++ Q G F+ M
Sbjct: 457 WNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMS 516
Query: 368 Q 368
+
Sbjct: 517 E 517
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
+A+I Y G++ ++ VF+ MP ++LV WN +++GY + ++FE + K
Sbjct: 427 SALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLK 486
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE-ACMLFES 210
D +S+ ++LS Q G D + F+ M E+ Y R+E +CM+
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFNMMSEE-----------YGIKPRLEHYSCMV--- 532
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGY-AQNNY-LAE-- 265
+L+G + +L +A + +P D W ++ QNN LAE
Sbjct: 533 ----------NLLG---RAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIA 579
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNG---KVDEAR 298
AQ+LF P ++ T+ M + Y G +VD R
Sbjct: 580 AQKLFHLEP-ENPGTYVLMSNIYAAKGMWTEVDSIR 614
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 264/809 (32%), Positives = 417/809 (51%), Gaps = 95/809 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-----SYNAMISGYLLNGQLDPARQV 114
++ QWN I+++ RN L +F M ++ + ++ +I + V
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 115 FDQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG-- 168
+ + DL N ++S Y + +S A LF++MP+R++VSWN+M+ ++ NG
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD 269
Query: 169 ---YADAARRI----------------------FDRMLEKNEISWNGLLAAYVQNGRIEE 203
D A + L+K + N L+ Y + G I +
Sbjct: 270 GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID 329
Query: 204 ACMLFESKANWEVVSWNSLMGGF------------VKQKRLG------DAKWIFDRMPV- 244
+ M+F+ N VVSWN+++GGF ++Q G D I + +PV
Sbjct: 330 SQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Query: 245 ----------------------RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
DE+ N + YA+ L+ AQR+F K + +W
Sbjct: 390 FDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWN 449
Query: 283 AMVSGYVQNGKVDEARMIFDA---------MPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
A++ GY Q+ + R+ DA +P+ TV ++++ + K + + +E+
Sbjct: 450 ALIGGYAQSS---DPRLSLDAHLQMKNSGLLPDNFTVC--SLLSACSKLKSLRLGKEVHG 504
Query: 334 AMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+ +++ + ++++ Y GE+ + LFD M + +SW +I G+ Q+G+ E
Sbjct: 505 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPER 564
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L LF +M YG + +V C+ L SL LG++ H +K E F+ +++
Sbjct: 565 ALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIID 624
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY K G++ ++ F + +K SWN MI GY HG K+A+ LFE M+ G PDD+T
Sbjct: 625 MYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLT 684
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+G+L+AC+H+GL+ +G Y M +G+ PN KHY C++D+LGRAG+LD A + M
Sbjct: 685 FLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEM 744
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
EPD W +LL CR++ E+ EK A +F +EPE YVLLSNLYA G+W DV
Sbjct: 745 SEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVR 804
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
+VR +M++ ++K G SW+E+ KV +F VG+ + I + LE K+ + G+
Sbjct: 805 QVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRP 864
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
T V HD+ EEEK LR HSEKLA+ YG++ G +RV KNLR+C DCHNA K IS
Sbjct: 865 DTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLIS 924
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K++ R I++RDN RFHHF+ G CSCGDYW
Sbjct: 925 KVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 149/633 (23%), Positives = 246/633 (38%), Gaps = 115/633 (18%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWNV----------MISGYVRNKSLSAARNLFEM 148
IS + G LD + +V + D S +V ++ + K + R + +
Sbjct: 50 ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHL 109
Query: 149 MP-----KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+ + D V +++ YA G D +R FD + KN WN ++++Y +N E
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHE 169
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY- 262
+F K I + D ++ +I A +
Sbjct: 170 VLEMF--------------------------IKMISKTHLLPDNFTFPCVIKACAGISDV 203
Query: 263 ---LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
LA + + V+D+F A+VS Y +G V +A +FD MPE+N VSWN+MI +
Sbjct: 204 GIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVF 263
Query: 320 ---------------VQTKRMDMARELFEAMTCKNVASW-------------NTMITGYA 351
V T ARE E K V W N ++ Y+
Sbjct: 264 SDNGDDGAFMPDVATVVTVLPVCARER-EIGVGKGVHGWAVKLSLDKELVVNNALMDMYS 322
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT- 410
+ G I ++ +F + +SW ++ G++ G + L +M E + T
Sbjct: 323 KWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTI 382
Query: 411 -SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+ + C + + L K+LH +K F + NA + Y KCGS+ A F I
Sbjct: 383 LNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRS 442
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
K + SWN +I GYA+ + +L MK G+ PD+ T+ +LSACS + G E
Sbjct: 443 KTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEV 502
Query: 530 FYSMNRDY---------GVIPNSKHY--TCMVDLLGRA-------------------GRL 559
+ R++ V+ H C V +L A G
Sbjct: 503 HGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFP 562
Query: 560 DEAQNLMKNMPF---EPDAATWGALLGACRLYGKTELAEKA-AEVIFEMEPENAGMYVLL 615
+ A L + M +P + + GAC L L +A A + + +NA + +
Sbjct: 563 ERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSI 622
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
++YA +G SKV G+K+ + SW
Sbjct: 623 IDMYAKNGAITQSSKVF-----NGLKEKSAASW 650
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 23/271 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQ 113
D + WN IT H++NG + AL +F M + +S + L L R+
Sbjct: 543 DNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGRE 602
Query: 114 ----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ + + +I Y +N +++ + +F + ++ SWN M+ GY +G
Sbjct: 603 AHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGR 662
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEAC-MLFESKANW----EVVSWN 220
A A ++F+ M +++++ G+L A +G + E L + K+++ + +
Sbjct: 663 AKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYA 722
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMIT--GYAQNNYLAE--AQRLFEEAPV 275
++ + +L +A + M +V WN++++ QN + E A +LF P
Sbjct: 723 CVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPE 782
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
K + + + Y GK D+ R + M E
Sbjct: 783 KPE-NYVLLSNLYAGLGKWDDVRQVRQRMKE 812
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/646 (38%), Positives = 356/646 (55%), Gaps = 48/646 (7%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L ++ N LL + + + A ++F + + +N+L+ G V DA ++
Sbjct: 31 LHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYA 90
Query: 241 RMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQN 291
M D ++ ++ + + +K DVF T +V Y +N
Sbjct: 91 SMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKN 150
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF------------------- 332
G + +AR +FD +PEKN VSW A+I GY+++ A LF
Sbjct: 151 GFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRIL 210
Query: 333 --------------------EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
E+ + NV +++ YA+ G + AR +FD M + D +
Sbjct: 211 YACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVV 270
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
W+A+I GYA +G +++L +F EM+R R + V S C+ L +LELG G +
Sbjct: 271 CWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLM 330
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
F + +G AL+ Y KCGSV +A F+ + KD + +N +I+G A G A
Sbjct: 331 DGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAF 390
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+F M VG++PD T VG+L C+H GLV+ G YF M+ + V P +HY CMVDL
Sbjct: 391 GVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDL 450
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
RAG L EAQ+L+++MP E ++ WGALLG CRL+ T+LAE + + E+EP N+G Y
Sbjct: 451 QARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHY 510
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSN+Y+AS RW + K+R + +G++K+ G SW+EV VH F VGDT HP +IY
Sbjct: 511 VLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIY 570
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
LE L L++ G+ +T+ VL DV EEEKE+ L HSEKLAVA+ ++S A IRV+
Sbjct: 571 EKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVV 630
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLRVC DCH AIK +SK+ GR II+RDNNRFHHF+ GSCSC DYW
Sbjct: 631 KNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 25/393 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D N+ + + + A VF P + YN +I G + N A V+ M
Sbjct: 34 DTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMR 93
Query: 120 QRDLVSWNVMISGYVRNKS-----LSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYA 170
Q N ++ + +L ++ K DV ++ Y++NG+
Sbjct: 94 QHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFL 153
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGF 226
AR++FD + EKN +SW ++ Y+++G EA LF E + + ++
Sbjct: 154 TDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYAC 213
Query: 227 VKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ L +WI M V + +++ YA+ + EA+R+F+ KDV W+
Sbjct: 214 SRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWS 273
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIAGYVQTKRM------DMARELFEA- 334
A++ GY NG EA +F M +N AM+ + R+ + AR L +
Sbjct: 274 ALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGD 333
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
N +I YA+ G + A+ +F M + DC+ + A+I+G A G+ + +F
Sbjct: 334 EFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVF 393
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+M + G + + + F +L C + ++ G +
Sbjct: 394 GQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHR 426
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 166/381 (43%), Gaps = 43/381 (11%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K DWD+ + + +NG A VF+ +P ++ VS+ A+I GY+ +G A
Sbjct: 130 KTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALG 189
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-------------DVVSWNTM 160
+F R L+ + + + L A + ++ R +V ++
Sbjct: 190 LF-----RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSL 244
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-MLFESKANWEVVSW 219
+ YA+ G + ARR+FD M+EK+ + W+ L+ Y NG +EA + FE +
Sbjct: 245 VDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDC 304
Query: 220 NSLMGGFVKQKRLGD---AKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+++G F RLG W M + + V +I YA+ +A+A+ +F+
Sbjct: 305 YAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKG 364
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMD 326
KD + A++SG G V A +F M P+ NT + ++ G +D
Sbjct: 365 MRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNT--FVGLLCGCTHAGLVD 422
Query: 327 MARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
F M+ + + M+ A++G + A++L MP + + I W A++ G
Sbjct: 423 DGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGG 482
Query: 381 ---YAQSGYSEDSLRLFIEMK 398
+ + +E L+ IE++
Sbjct: 483 CRLHKDTQLAEHVLKQLIELE 503
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L SL KQ H L+++G ++ N LL + + A F + ++ +NT
Sbjct: 12 GLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS------HTGLVEKGTEYFY 531
+I G + +DA+ ++ SM+ G PD+ T +L AC+ H GL +
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL------SLH 125
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
S+ G + T +V L + G L +A+ + +P E + +W A++ G
Sbjct: 126 SLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVSWTAIICGYIESGCF 184
Query: 592 ELAEKAAEVIFEM--EPENAGMYVLLSNLYA-------ASGRWGD 627
A + EM P++ + L+ LYA ASGRW D
Sbjct: 185 GEALGLFRGLLEMGLRPDS---FTLVRILYACSRVGDLASGRWID 226
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 342/544 (62%), Gaps = 13/544 (2%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D ++ N +I Y++ + + A++ F E PVK + +W ++ QN + EA + M
Sbjct: 77 DILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQ 136
Query: 306 EKNTVSWNAMIAGYVQT--------KRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ T I+ + + M + +A N ++ YA+ I
Sbjct: 137 REGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIK 196
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF--TSVLST 415
A +F+ MP+ + ++W++++AGY Q+G+ E++L +F + G ++ PF +S +S
Sbjct: 197 DASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMG--FDQDPFMISSAVSA 254
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD-KDVIS 474
CA LA+L GKQ+H K GF + +V ++L+ MY KCG + EAY F+ +++ + ++
Sbjct: 255 CAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVL 314
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WN MI+G+ARH +A++LFE M+ G PDD+T V +L+ACSH GL E+G +YF M
Sbjct: 315 WNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMV 374
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
R + + P+ HY+CM+D+LGRAG + +A +L++ MPF ++ WG+LL +C++YG E A
Sbjct: 375 RQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFA 434
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
E AA+ +FEMEP NAG ++LL+N+YAA+ +W +V++ R +R+ V+K G SW+E++NK
Sbjct: 435 EIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNK 494
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
+H+F+VG+ HP+ D IYA L+ L +LK+ + T LHDV E K+ +LR+HSEKL
Sbjct: 495 IHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKL 554
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+ +G++ +P PIR++KNLR+C DCH +K +SK R II+RD NRFHHF G CSC
Sbjct: 555 AITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDGFCSC 614
Query: 775 GDYW 778
G++W
Sbjct: 615 GEFW 618
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 146/312 (46%), Gaps = 28/312 (8%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ D+++ N++I+ Y + + +AR F MP + +VSWNT++ QN A ++ +
Sbjct: 75 EMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQ 134
Query: 180 MLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG-----FVKQK 230
M + NE + + +L I E CM + + + N +G + K
Sbjct: 135 MQREGTPFNEFTISSVLCNCAFKCAILE-CMQLHAFSIKAAIDSNCFVGTALLHVYAKCS 193
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVS 286
+ DA +F+ MP ++ V+W++M+ GY QN + EA +F A + +D F ++ VS
Sbjct: 194 SIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVS 253
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWN-----AMIAGYVQTKRMDMARELFE-AMTCKNV 340
+ E + + A+ K+ N ++I Y + + A +F+ + +++
Sbjct: 254 ACAGLATLIEGKQV-HAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSI 312
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIE 396
WN MI+G+A+ A LF++M Q D +++ ++ + G E+ + F
Sbjct: 313 VLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDL 372
Query: 397 MKRYGERLNRSP 408
M R + N SP
Sbjct: 373 MVR---QHNLSP 381
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 165/400 (41%), Gaps = 88/400 (22%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ DI N+ I + + DSA FN MP +S VS+N +I N + A ++ Q
Sbjct: 75 EMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQ 134
Query: 118 MPQRDLVSWN----------------------------------------VMISGYVRNK 137
M QR+ +N ++ Y +
Sbjct: 135 M-QREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCS 193
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF----------DRMLEKNEIS 187
S+ A +FE MP+++ V+W++M++GY QNG+ + A IF D + + +S
Sbjct: 194 SIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVS 253
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD-RMPVRD 246
LA ++ ++ + +S + +SL+ + K + +A +F + VR
Sbjct: 254 ACAGLATLIEGKQVHA--ISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRS 311
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFD 302
V WN MI+G+A++ EA LFE+ + F T+ +++ G +E + FD
Sbjct: 312 IVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFD 371
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
M ++ +S +V ++ MI ++G + A +L
Sbjct: 372 LMVRQHNLS--------------------------PSVLHYSCMIDILGRAGLVHKAYDL 405
Query: 363 FDRMPQHDCIS-WAAIIAG---YAQSGYSEDSLRLFIEMK 398
+RMP + S W +++A Y ++E + + EM+
Sbjct: 406 IERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEME 445
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L CA S G+ H Q++++G E N L+ MY KC V+ A F E+ K
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
++SWNT+I ++ ++AL L M+ G ++ T+ +L C+ + + + +
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQ-LH 167
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+ + + N T ++ + + + +A + ++MP E +A TW +++
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMA 218
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQ-RDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-- 152
+++I Y G + A VF + + R +V WN MISG+ R+ A LFE M +R
Sbjct: 284 SSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGF 343
Query: 153 --DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEEAC 205
D V++ +L+ + G + ++ FD M+ ++ +S ++ ++ + G + +A
Sbjct: 344 FPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAY 403
Query: 206 MLFESKA-NWEVVSWNSLMG-----GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
L E N W SL+ G ++ + AK++F+ P + + + YA
Sbjct: 404 DLIERMPFNATSSMWGSLLASCKIYGNIEFAEIA-AKYLFEMEP-NNAGNHILLANIYAA 461
Query: 260 N---NYLAEAQRLFEEAPVK 276
N + +A A++L E V+
Sbjct: 462 NKKWDEVARARKLLRETDVR 481
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 68 ITTHMRNGCCDSALHVFNS-MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----D 122
I + + GC A VF + RS V +NAMISG+ + + A +F++M QR D
Sbjct: 287 IDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPD 346
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARRIF 177
V++ +++ + F++M ++ V+ ++ M+ + G A +
Sbjct: 347 DVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLI 406
Query: 178 DRM-LEKNEISWNGLLAAYVQNGRIEEACM----LFESKAN 213
+RM W LLA+ G IE A + LFE + N
Sbjct: 407 ERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPN 447
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/590 (40%), Positives = 330/590 (55%), Gaps = 59/590 (10%)
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA-----------PV- 275
K LG A+ IFDR+ R + WNT+I Y +N + + LF E P
Sbjct: 62 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCV 121
Query: 276 --------------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
DVF ++V+ Y + G++D AR +FD M +K+
Sbjct: 122 IKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDV 181
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
V WN++I G N+ SWN MI GY +SG+ A LF +MP
Sbjct: 182 VLWNSLIDG--------------------NLVSWNAMINGYMKSGDFDSALELFYQMPIW 221
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D ++W +IAGY +G D++++F M + G R + + SVLS + LA L G+ +H
Sbjct: 222 DLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIH 281
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
+ K GFE +G +L+ MY KCG +E A F I K V W +I G HG
Sbjct: 282 SYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMAN 341
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
AL LF M G+KP+ I +G+L+AC+H GLV+ G +YF M +Y + P +HY C+
Sbjct: 342 HALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCL 401
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
VD+L RAG L+EA+N ++NMP P+ W +LLG R +GK ++ E AA+ + E+ PE
Sbjct: 402 VDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETI 461
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
G Y+LLSN+YAASG W VS VR M RG +K G S +E + +H F VGD HP+
Sbjct: 462 GCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTK 521
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDV-GEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
IYA + E++ KLK G V T VL + GE+EKE L HSE+LA+A+G++++ G P
Sbjct: 522 EIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIP 581
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IR+MKNLRVC DCH+ K +SKI R II+RDN RFHHF GSCSC DYW
Sbjct: 582 IRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 200/489 (40%), Gaps = 109/489 (22%)
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDP-------ARQVFDQMPQRDLVSWNVMISGY 133
LH F+ ++++ + +S LL DP AR +FD++ +R L+ WN +I Y
Sbjct: 35 LHAFS---LKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCY 91
Query: 134 VRNKSLSAARNLF-----EMMPKR---------------------------------DVV 155
V N+ LF E +P DV
Sbjct: 92 VENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 151
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
++++ Y++ G D AR++FD M++K+ + WN L+ +
Sbjct: 152 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLI--------------------DGN 191
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----- 270
+VSWN+++ G++K A +F +MP+ D V+WN MI GY N +A ++F
Sbjct: 192 LVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLK 251
Query: 271 --EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
+ + + VSG GK R I M EKN + ++
Sbjct: 252 LGSRPSHATLVSVLSAVSGLAVLGK---GRWIHSYM-EKNGFELDGILG----------- 296
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
++I YA+ G I A +F + + W AII G G +
Sbjct: 297 ---------------TSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMAN 341
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNAL 447
+L LF+EM + G + N F VL+ C + ++ G+Q ++ + E L
Sbjct: 342 HALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCL 401
Query: 448 LVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+ + C+ G +EEA + E + + + + W +++ G H GK + + + + + + P+
Sbjct: 402 VDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNH--GKIDIGEYAAQRVIEVAPE 459
Query: 507 DITMVGILS 515
I +LS
Sbjct: 460 TIGCYILLS 468
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 36/319 (11%)
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
+G D + ++NS+ + VS+NAMI+GY+ +G D A ++F QMP DLV+WN+MI+GY
Sbjct: 174 DGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGY 233
Query: 134 VRNKSLSAARNLFEMMPK-------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N A +F MM K +VS + +SG A G R +EKN
Sbjct: 234 ELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKG----RWIHSYMEKNGF 289
Query: 187 SWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+G+L Y + G IE A +F + +V W +++ G A +F
Sbjct: 290 ELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLE 349
Query: 242 MPVRDEVSWNTMITGYAQN-----NYLAEAQRLFE----EAPVKDVFT-WTAMVSGYVQN 291
M + + N +I N + + ++ F+ E ++ + +V +
Sbjct: 350 M-CKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRA 408
Query: 292 GKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM----ARELFEAMTCKNVASWNTM 346
G ++EA+ + MP N V W +++ G ++D+ A+ + E + + + +
Sbjct: 409 GHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAP-ETIGCYILL 467
Query: 347 ITGYAQSG---EITHARNL 362
YA SG +++H R +
Sbjct: 468 SNMYAASGMWEKVSHVREM 486
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 53/270 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ WN I +M++G DSAL +F MP V++N MI+GY LNGQ A ++F
Sbjct: 189 DGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFM 248
Query: 118 M-------PQRDLVSWNVMISG--------------------------------YVRNKS 138
M LVS +SG Y +
Sbjct: 249 MLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 308
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLL-- 192
+ +A +F + K+ V W ++ G +G A+ A +F M L+ N I + G+L
Sbjct: 309 IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNA 368
Query: 193 ---AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
A V +GR M+ E K + + L+ + L +AK + MP+ ++V
Sbjct: 369 CNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKV 428
Query: 249 SWNTMITGYAQNNYLA----EAQRLFEEAP 274
W +++ G + + AQR+ E AP
Sbjct: 429 IWMSLLGGSRNHGKIDIGEYAAQRVIEVAP 458
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 26/295 (8%)
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC--KCGSVEEAYHAFEEIV 468
S+ TC+ +E QLH +K FV + LL +Y K + A F+ I
Sbjct: 21 SLFQTCSAPQEVE---QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQ 77
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ +I WNT+I Y + F D ++LF + + PD+ T+ ++ C+ G+V++G +
Sbjct: 78 RRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQ 136
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL- 587
+ + G + +V++ + G +D A+ + M + D W +L+ +
Sbjct: 137 -IHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGNLVS 194
Query: 588 -------YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
Y K+ + A E+ ++M + + L+ Y +G++ D K+ M G
Sbjct: 195 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG- 253
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDR-IYAYLEELEFKLKQDGFVYSTKLV 694
+ + + + V + V +V K R I++Y+E+ F+L DG + T L+
Sbjct: 254 SRPSHATLVSVLSAVSGLAV-----LGKGRWIHSYMEKNGFEL--DG-ILGTSLI 300
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 269/744 (36%), Positives = 384/744 (51%), Gaps = 105/744 (14%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N ++S +VR L A +F M +RD+ SWN ++ GYA+ GY D A ++ RML
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRML----- 187
Query: 187 SWNGL----------------LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
W G+ L + + + + +++ +VV N+L+ +VK
Sbjct: 188 -WVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVV--NALITMYVKCG 244
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVS 286
+ A+ +FDRMP RD +SWN MI+GY +N+ E RLF E D+ T T+++S
Sbjct: 245 DIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVIS 304
Query: 287 ---------------GYV-QNGKV-------------------DEARMIFDAMPEKNTVS 311
GYV + G V DEA M+F M K+ VS
Sbjct: 305 ACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVS 364
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVAS----------------------------- 342
W AMI+GY + + A E + M + V
Sbjct: 365 WTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFAD 424
Query: 343 ----------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
N++I Y++ I A +F R+P + ISW +II G + S ++L
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF 484
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
F +M + N SVLS CA + +L GK++H ++ G F+ NALL MY
Sbjct: 485 FFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYV 543
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+CG +E A++ F +KDV SWN ++ GYA+ G G A+ LF M + PD+IT
Sbjct: 544 RCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTS 602
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+L ACS +G+V G EYF SM + + PN KHY +VDLLGRAGRL++A +K MP +
Sbjct: 603 LLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPID 662
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
PD A WGALL ACR+Y EL E AA+ IFEM+ ++ G Y+LL NLYA SG+W +V++VR
Sbjct: 663 PDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVR 722
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
MR+ + G SW+EV +VH F GD HP+ I A LE K++ G S
Sbjct: 723 KIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKD 782
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
D+ + K + HSE+LA+A+G+++ G PI V KNL +CE+CHN +K ISK+V
Sbjct: 783 SRRDDI-DASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVV 841
Query: 753 GRLIILRDNNRFHHFSGGSCSCGD 776
R I +RD +FHHF G CSCGD
Sbjct: 842 RRGISVRDTEQFHHFKDGVCSCGD 865
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 191/430 (44%), Gaps = 74/430 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N IT +++ G SA VF+ MPRR +S+NAMISGY N ++F M
Sbjct: 229 DVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMR 288
Query: 120 Q----RDLVSWNVMIS---------------GYVRNKSLSA------------------- 141
+ DL++ +IS GYV A
Sbjct: 289 EFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWD 348
Query: 142 -ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A +F M +D+VSW M+SGY +NG + A + M + +EI+ +L+A
Sbjct: 349 EAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACA 408
Query: 197 QNGRIEEACMLFESKANWEVVSW----NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
G +++ ML E + S+ NSL+ + K + + A +F R+P ++ +SW +
Sbjct: 409 GLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTS 468
Query: 253 MITGYAQNNYLAEAQRLFEEAPVK---DVFTWTAMVSGYVQNGKVDEARMI--------- 300
+I G N EA F++ + + T +++S + G + + I
Sbjct: 469 IILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGL 528
Query: 301 -FDA-MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
FD +P NA++ YV+ RM+ A F + K+VASWN ++TGYAQ G+
Sbjct: 529 GFDGFLP-------NALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGL 580
Query: 359 ARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVL 413
A LF +M + D I++ +++ ++SG D L F M+ ++ N + SV+
Sbjct: 581 AVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVV 640
Query: 414 STCANLASLE 423
LE
Sbjct: 641 DLLGRAGRLE 650
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++I G E +L M+ + + ++L C + G ++H + K
Sbjct: 64 SLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT 123
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G +GNALL M+ + G + EA++ F ++ ++D+ SWN ++ GYA+ G+ +AL L+
Sbjct: 124 VTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLY 183
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
M VGI+PD T +L C + +G E + R YG + ++ + +
Sbjct: 184 HRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR-YGFESDVDVVNALITMYVK 242
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
G + A+ + MP D +W A++ Y + ++ + + F M
Sbjct: 243 CGDIFSARLVFDRMP-RRDRISWNAMISG---YFENDVCLEGLRLFFMM 287
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/732 (33%), Positives = 401/732 (54%), Gaps = 56/732 (7%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SW 157
Y+ G L R++FD++ + WN+++S Y + + + +LF+ M K VV ++
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 198
Query: 158 NTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
+L +A G +R+ +L+ N N L+AAY + G +E A LF+ +
Sbjct: 199 TCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE 258
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----------------------------- 244
+VVSWNS++ G V G+ IF +M +
Sbjct: 259 PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRAL 318
Query: 245 ---------RDEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
+EV + NT++ Y++ L A +F + + +WT++++ YV+ G
Sbjct: 319 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLY 378
Query: 295 DEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTM 346
+A +FD M K + + +++ + +D R++ + N+ N +
Sbjct: 379 SDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNAL 438
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I YA+ G + AR +F ++P D +SW +I GY+Q+ ++L LF++M++ + +
Sbjct: 439 INMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQF-KPDD 497
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
VL CA LA+L+ G+++HG +++ G+ + V AL+ MY KCG + A F+
Sbjct: 498 ITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDM 557
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I KD+ISW MIAGY HGFG +A+ F M+ GI+PD+ + IL+ACSH+GL+ +G
Sbjct: 558 IPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEG 617
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
++F SM + GV P +HY C+VDLL R G L +A +++MP +PD WG LL CR
Sbjct: 618 WKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCR 677
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++ +LAEK AE IFE+EP+N YV+L+N+YA + +W +V K+R +M+ RG K+ G
Sbjct: 678 IHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGC 737
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHM 706
SW+EV K + F G++ HP+ +I L +L +++ + + + VL + + EKE +
Sbjct: 738 SWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMI 797
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
HSEK A+A+GIL++P GR +RV KN RVC DCH K +SK I+LRD+NRFHH
Sbjct: 798 QCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHH 857
Query: 767 FSGGSCSCGDYW 778
F G CSC D +
Sbjct: 858 FKDGLCSCRDAF 869
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 216/450 (48%), Gaps = 33/450 (7%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVV--SWNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
N + + + G + A L ++E+ S+ S++ ++K L D K + +
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNG 124
Query: 246 ---DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
DE ++ Y L + +++F++ VF W ++S Y + G E+ +F
Sbjct: 125 ISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFK 184
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-------------NVASWNTMITG 349
M +K V N Y T + L + CK N A N++I
Sbjct: 185 KM-QKLGVVGNC----YTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAA 239
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G + A NLFD + + D +SW ++I G +G+S + L +FI+M G ++ +
Sbjct: 240 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTL 299
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
SVL CAN+ +L LG+ LHG VK F N LL MY KCG++ A F ++ D
Sbjct: 300 VSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 359
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
++SW ++IA Y R G DA+ LF+ M++ G++PD T+ I+ AC+ + ++KG +
Sbjct: 360 TTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD- 418
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+S G+ N ++++ + G ++EA+ + +P + D +W ++G Y
Sbjct: 419 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG---YS 474
Query: 590 KTELAEKAAEVIFEME----PENAGMYVLL 615
+ L +A E+ +M+ P++ M +L
Sbjct: 475 QNLLPNEALELFLDMQKQFKPDDITMACVL 504
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 171/382 (44%), Gaps = 38/382 (9%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPAR 112
GD I W I ++R G A+ +F+ M R + +++ + LD R
Sbjct: 358 GDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 417
Query: 113 QVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
V + + +L N +I+ Y + S+ AR +F +P +D+VSWNTM+ GY+QN
Sbjct: 418 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNL 477
Query: 169 YADAARRIF---DRMLEKNEISWNGLLA-----AYVQNGRIEEACMLFESKANWEVVSWN 220
+ A +F + + ++I+ +L A + GR +L + V+
Sbjct: 478 LPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC- 536
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---- 276
+L+ + K L A+ +FD +P +D +SW MI GY + + EA F E +
Sbjct: 537 ALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEP 596
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMAREL 331
D +++A+++ +G ++E F++M + V + ++ + + A +
Sbjct: 597 DESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKF 656
Query: 332 FEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQH------DCISWAAIIAG-YAQ 383
E+M K + W +++G I H L +++ +H D + ++A YA+
Sbjct: 657 IESMPIKPDTTIWGVLLSGC----RIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAE 712
Query: 384 SGYSEDSLRLFIEMKRYGERLN 405
+ E+ +L M++ G + N
Sbjct: 713 AEKWEEVKKLRKRMQKRGFKQN 734
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/609 (40%), Positives = 348/609 (57%), Gaps = 59/609 (9%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK------RLGD---AKWIFDRM 242
L A V++ E C L K VV S GF+ + RLG A+ +FD M
Sbjct: 37 LIAAVKSCVSIELCRLLHCK----VVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV------FTWTAMVSGYVQNGKVDE 296
P RD VSWN++I+GY+ YL + + + +V T+ +M+S V G +E
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 297 ARMI------FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
R I F + E V NA I Y +T + + +LFE ++ KN+ SWNTMI
Sbjct: 153 GRCIHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI--- 207
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ H +N G +E L F +R G +++ F
Sbjct: 208 -----VIHLQN-----------------------GLAEKGLAYFNMSRRVGHEPDQATFL 239
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+VL +C ++ + L + +HG ++ GF + ALL +Y K G +E++ F EI
Sbjct: 240 AVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSP 299
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D ++W M+A YA HGFG+DA+ FE M GI PD +T +L+ACSH+GLVE+G YF
Sbjct: 300 DSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYF 359
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
+M++ Y + P HY+CMVDLLGR+G L +A L+K MP EP + WGALLGACR+Y
Sbjct: 360 ETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 419
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
T+L KAAE +FE+EP + YV+LSN+Y+ASG W D S++R M+ +G+ + +G S++E
Sbjct: 420 TQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRY 709
NK+H F VGD HPE ++I L+E+ K+K + G+ T+ VLHDVGE+ KE M+
Sbjct: 480 HGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQ 539
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSEK+A+A+G+L + PI + KNLR+C DCH K IS I R II+RD+ RFHHF
Sbjct: 540 HSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLD 599
Query: 770 GSCSCGDYW 778
GSCSC DYW
Sbjct: 600 GSCSCSDYW 608
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 194/466 (41%), Gaps = 97/466 (20%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML------E 182
++ Y+R A LF+ MP+RD+VSWN+++SGY+ GY + RM+
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 183 KNEISWNGLLAAYVQNGRIEEA-C---MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
NE+++ +++A V G EE C ++ + EV N+ + + K L + +
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 239 FDRMPVRDEVSWNTMITGYAQNN-------YLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
F+ + +++ VSWNTMI + QN Y ++R+ E D T+ A++
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP---DQATFLAVLRSCEDM 248
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
G V A+ I + M G+ K + A ++ Y+
Sbjct: 249 GVVRLAQGIHGLI----------MFGGFSGNKCITTA-----------------LLDLYS 281
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G + + +F + D ++W A++A YA G+ D+++ F M YG + FT
Sbjct: 282 KLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTH 341
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI---- 467
+L+ C++ G VEE H FE +
Sbjct: 342 LLNACSH-----------------------------------SGLVEEGKHYFETMSKRY 366
Query: 468 -VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+D + ++ M+ R G +DA L + M ++P +L AC + G
Sbjct: 367 RIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP---MEPSSGVWGALLGACRVYKDTQLG 423
Query: 527 TEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEA---QNLMKN 568
T+ + R + + P + ++Y + ++ +G +A +NLMK
Sbjct: 424 TK---AAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQ 466
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 41/278 (14%)
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVM 450
R F+ + L+ + +S+++ + S+EL + LH ++VK V + G F+G+ L+
Sbjct: 18 RRFLSQSSFVHSLD-ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHG-FIGDQLVGC 75
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM--KTVGIKPDDI 508
Y + G A F+E+ ++D++SWN++I+GY+ G+ + M VG +P+++
Sbjct: 76 YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEV 135
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + ++SAC + G E+G + + +GV+ K ++ G+ G L + L ++
Sbjct: 136 TFLSMISACVYGGSKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194
Query: 569 MPF----------------------------------EPDAATWGALLGACRLYGKTELA 594
+ EPD AT+ A+L +C G LA
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 595 EKAAEVI-FEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
+ +I F N + L +LY+ GR D S V
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 145/342 (42%), Gaps = 30/342 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL---- 123
+ ++R G A +F+ MP R VS+N++ISGY G L +V +M ++
Sbjct: 73 VGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRP 132
Query: 124 --VSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIF 177
V++ MIS V S R + ++ K +V N ++ Y + G ++ ++F
Sbjct: 133 NEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLF 192
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFE---------SKANWEVVSWNSLMGGFVK 228
+ + KN +SWN ++ ++QNG E+ F +A + V + G V+
Sbjct: 193 EDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+ +F ++ ++ Y++ L ++ +F E D WTAM++ Y
Sbjct: 253 LAQGIHGLIMFGGFSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 289 VQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----N 339
+G +A F+ M + V++ ++ + ++ + FE M+ +
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAG 380
+ ++ M+ +SG + A L MP W A++
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP------RRSSVSYNAMISGYLLNGQLDPARQ 113
D+ WN I+ + G V + M R + V++ +MIS + G + R
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 114 V------FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+ F + + +V N I+ Y + L+++ LFE + +++VSWNTM+ + QN
Sbjct: 156 IHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 168 GYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVS 218
G A+ F+ E ++ ++ +L + G + A ++F + + ++
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAP 274
+L+ + K RL D+ +F + D ++W M+ YA + + +A + FE
Sbjct: 274 -TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGI 332
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
D T+T +++ +G V+E + F+ M ++
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/625 (36%), Positives = 358/625 (57%), Gaps = 30/625 (4%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
++ YA G R IFD + +KN + +N ++ +YV NG ++A ++F++ AN
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
N +K + W V ++ + G N Y+
Sbjct: 137 NYTYPCVLKACSVSGNLW------VGLQIHGAVVKLGLDMNLYIG--------------- 175
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR----MDMARELFEAM 335
+VS Y + +D AR + D MP ++ VSWN+M+AGY Q R + + RE+ +
Sbjct: 176 --NGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLK 233
Query: 336 TCKNVASWNTMITGYAQSG--EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ + +++ + + + +++F ++ + ISW +IA Y + +++ L
Sbjct: 234 LKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDL 293
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
+++M+ +G + +SVL C +L++ LG+++H + + + NAL+ MY K
Sbjct: 294 YLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAK 353
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG ++EA F++++ +DV+SW +MI+ Y G GKDA+ LF+ M+ G PD I V +
Sbjct: 354 CGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSV 413
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L+ACSH GLV++G Y +++ +YG+ P +HY CMVDLLGRAG++DEA +L + MP EP
Sbjct: 414 LAACSHAGLVDEG-RYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEP 472
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+ WG+LL ACR+Y +A AA+ +F++ PE +G YVLLSN+YA +GRW DV VR
Sbjct: 473 NERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRS 532
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M +G+KK+ G S +E+ + V+TF GD H + IY L L ++K+ G++ T
Sbjct: 533 IMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDS 592
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
LHDV EE+KE L HSEKLA+ + IL+ G IR+ KN+RVC DCH A K ISKI
Sbjct: 593 ALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAE 652
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD +RFHHF G CSCGDYW
Sbjct: 653 REIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 169/418 (40%), Gaps = 84/418 (20%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----- 152
++ Y G+ R +FD++ +++V +NVMI YV N A +F+ M +
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 153 ----------------------------------DVVSWNTMLSGYAQNGYADAARRIFD 178
++ N ++S Y + + DAARR+ D
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ------KRL 232
M ++ +SWN ++A Y QNGR +A L + ++ MG + +
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV 256
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN- 291
K +F ++ + +SWN MI Y N EA L+ + V V +S +
Sbjct: 257 LYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPAC 316
Query: 292 GKVDEA---RMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
G + A R I + + K N + NA+I Y + + AR +F+ M ++V SW
Sbjct: 317 GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWT 376
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+MI+ Y SG+ A LF +M SG++ D +
Sbjct: 377 SMISAYGMSGQGKDAVALFKKM---------------RDSGFTPDWI------------- 408
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
F SVL+ C++ ++ G+ + + G G N ++ + + G ++EAYH
Sbjct: 409 ---AFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYH 463
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 167/371 (45%), Gaps = 61/371 (16%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQ 113
D ++ +NV I +++ NG AL VF +M + + +Y ++ ++G L Q
Sbjct: 99 DKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQ 158
Query: 114 VFDQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG- 168
+ + + +L N ++S Y + K L AAR + + MP RD+VSWN+M++GYAQNG
Sbjct: 159 IHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGR 218
Query: 169 YADA------------------------------------ARRIFDRMLEKNEISWNGLL 192
+ DA + +F ++ EK+ ISWN ++
Sbjct: 219 FNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMI 278
Query: 193 AAYVQNGRIEEACMLFESK----ANWEVVSWNSLMG--GFVKQKRLG-DAKWIFDRMPVR 245
A YV N EA L+ + VS +S++ G + LG +R +R
Sbjct: 279 AVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLR 338
Query: 246 DEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+ N +I YA+ L EA+ +F++ +DV +WT+M+S Y +G+ +A +F M
Sbjct: 339 PNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKM 398
Query: 305 PEKN-TVSWNAMI---AGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEI 356
+ T W A + A +D R F M + +N M+ ++G+I
Sbjct: 399 RDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKI 458
Query: 357 THARNLFDRMP 367
A +L +MP
Sbjct: 459 DEAYHLTRQMP 469
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/510 (43%), Positives = 317/510 (62%), Gaps = 23/510 (4%)
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+D+F A+V Y + G VDEA +FD + EK+ VSWNAM+ GY Q R + A LFE M
Sbjct: 46 EDLFVGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKM 105
Query: 336 TCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
+ NV SW+ +I +AQ G ++F M Q G + D+L
Sbjct: 106 REENIELNVVSWSAVIAAFAQRGLGCETLDVFREM----------------QHGEANDAL 149
Query: 392 RLFIEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAG-CFVGNALL 448
LF M + + + FT L CA LA+L LG+Q+H +++ F++ +V N L+
Sbjct: 150 ELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLI 209
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY K G ++ A F+ + K+ +SW +++ GY HG GK+AL +F+ M+ VG++PD +
Sbjct: 210 DMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGV 269
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T++ +L ACSH+G++++G E+F SM++++GVIP +HY CMVDLLGRAGRL+EA L++
Sbjct: 270 TLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEG 329
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
M EP + W ALL CR++ EL E AA+ + E+ EN G Y LLSN+YA + RW DV
Sbjct: 330 MQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARRWKDV 389
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++VR M++ G++K G SW++ + TF V D HP+ +IY L L ++K G+V
Sbjct: 390 ARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIYEILRSLTQRIKVLGYV 449
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T LHDV +EEK +L HSEKLA+AYGIL G PIR+ KNLRVC DCHNAI +I
Sbjct: 450 PETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIRITKNLRVCGDCHNAITYI 509
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S I+ IILRD++RFHHF GSCSC YW
Sbjct: 510 SMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 168/385 (43%), Gaps = 74/385 (19%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPV 275
N+L+ + K + +A +FDR+ +D VSWN M+ GY+Q +A LF EE
Sbjct: 52 NALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIE 111
Query: 276 KDVFTWTAMVSGY---------------VQNGKVDEARMIF------DAMPEKNTVSWNA 314
+V +W+A+++ + +Q+G+ ++A +F D + + N + +
Sbjct: 112 LNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISC 171
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVAS-----WNTMITGYAQSGEITHARNLFDRMPQH 369
+ + + + R++ + + S N +I YA+SG+I AR +FD + Q
Sbjct: 172 ALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQK 231
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ +SW +++ GY G +++L +F EM+R G + + VL C++ ++ G +
Sbjct: 232 NFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFF 291
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
+ K E G G +E Y M+ R G
Sbjct: 292 NSMSK---EFGVIPG-------------QEHY--------------ACMVDLLGRAGRLN 321
Query: 490 DALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+A+ L E M+ ++P I V +LS C ++ L E + +N + N Y
Sbjct: 322 EAMELIEGMQ---MEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSE-----NDGSY 373
Query: 547 TCMVDLLGRAGR---LDEAQNLMKN 568
T + ++ A R + ++LMKN
Sbjct: 374 TLLSNIYANARRWKDVARVRSLMKN 398
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 152/338 (44%), Gaps = 37/338 (10%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
DL N ++ Y + + A +F+ + ++DVVSWN M++GY+Q G + A +F++M
Sbjct: 47 DLFVGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMR 106
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEEACMLF------ESKANWEVVSWNSLMGGFVKQK- 230
+E N +SW+ ++AA+ Q G E +F E+ E+ SW G VK
Sbjct: 107 EENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNC 166
Query: 231 -RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
+ A R+ + I Y N+ A ++ ++ Y
Sbjct: 167 FTISCALIACARLAA---LRLGRQIHAYILRNHFDSAF----------LYVANCLIDMYA 213
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNT 345
++G +D AR +FD + +KN VSW +++ GY R A E+F+ M + +
Sbjct: 214 KSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLV 273
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
++ + SG I F+ M + + +A ++ ++G +++ L M+
Sbjct: 274 VLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQME 333
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+ + ++LS C A++ELG+ QL+++ E
Sbjct: 334 PSSI---VWVALLSGCRIHANVELGEHAAKQLLELNSE 368
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 64/277 (23%)
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
R + +VL CA++ + GK +HG V+ G FVGNAL+ MY KCG V+EA
Sbjct: 10 RPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASK 69
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ I +KDV+SWN M+ GY++ G +DAL LFE M+ I+ + ++ +++A + GL
Sbjct: 70 VFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGL 129
Query: 523 VEKGTEYFYSMN----------------RDYGVIPNS----------------------- 543
+ + F M +D V PN
Sbjct: 130 GCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIH 189
Query: 544 -----KHY--------TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
H+ C++D+ ++G +D A+ + N+ + + +W +L+ ++G+
Sbjct: 190 AYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLK-QKNFVSWTSLMTGYGMHGR 248
Query: 591 TELAEKAAEVIFEM-----EPENAGMYVLLSNLYAAS 622
++A EV EM +P+ + V+ LYA S
Sbjct: 249 ---GKEALEVFDEMRRVGLQPDGVTLLVV---LYACS 279
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 148/338 (43%), Gaps = 45/338 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + + + G D A VF+ + + VS+NAM++GY G+ + A +F++M
Sbjct: 47 DLFVGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMR 106
Query: 120 QRDL----VSWNVMISGY---------------VRNKSLSAARNLFEMMPKRD------V 154
+ ++ VSW+ +I+ + +++ + A LF M K+D
Sbjct: 107 EENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNC 166
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEEACMLFE 209
+ + L A+ R+I +L + S N L+ Y ++G I+ A +F+
Sbjct: 167 FTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFD 226
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAE 265
+ VSW SLM G+ R +A +FD M D V+ ++ + + + +
Sbjct: 227 NLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQ 286
Query: 266 AQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGY 319
F E + + MV + G+++EA + + M E +++ W A+++G
Sbjct: 287 GIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGC 346
Query: 320 VQTKRMDM----ARELFEAMTCKNVASWNTMITGYAQS 353
+++ A++L E + +N S+ + YA +
Sbjct: 347 RIHANVELGEHAAKQLLE-LNSENDGSYTLLSNIYANA 383
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/541 (40%), Positives = 329/541 (60%), Gaps = 39/541 (7%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--------MDMA 328
D+ T +++ Y + G VD AR +FD MP ++ VSWN MI Q + M
Sbjct: 98 DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157
Query: 329 RE--------------------------LFEAMTCK-----NVASWNTMITGYAQSGEIT 357
RE L A K NV ++ YA+ G +
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F+ MP ++W+++ AGY Q+ E +L LF + G + ++ +SV+ CA
Sbjct: 218 DAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACA 277
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
LA++ GKQ++ L K GF + FV ++L+ MY KCG +EE+Y F ++ ++V+ WN
Sbjct: 278 GLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNA 337
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI+G +RH + ++LFE M+ +G+ P+D+T V +LSAC H GLV+KG +YF M +++
Sbjct: 338 MISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEH 397
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ PN HY+CMVD L RAG++ EA +L+ +PF A+ WG+LL +CR +G ELAE A
Sbjct: 398 HLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVA 457
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
A+ +F++EP N+G Y+LLSN+YAA+G+W +V+K+R +++ VKK G SW+E+++KVH
Sbjct: 458 AKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHL 517
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F VG+ HP+ IY+ L E+ +L++ G+ T+ LH VGE K+ +LR+HSEKLA
Sbjct: 518 FMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFT 577
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
G+L +P PIR+MKNLR+C DCH+ +K SK R +I+RD NRFHHF G CSCGD+
Sbjct: 578 MGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDF 637
Query: 778 W 778
W
Sbjct: 638 W 638
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 169/357 (47%), Gaps = 24/357 (6%)
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-- 208
K D+++ N +++ Y++ G D AR++FD M ++ +SWN ++ + QNG EA L
Sbjct: 96 KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQ 155
Query: 209 --ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG-----YAQNN 261
+ + +S++ + L + + + ++ + N + YA+
Sbjct: 156 MQREGTPFSEFTISSVLCACAAKCALSECQ-LLHAFAIKAAMDLNVFVATALLDVYAKCG 214
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF----------DAMPEKNTVS 311
+ +A +FE P + V TW++M +GYVQN ++A +F D + +
Sbjct: 215 LMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVIC 274
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
A +A ++ K+++ L ++ C N+ +++I YA+ G I + +F + + +
Sbjct: 275 ACAGLAAMIEGKQVNAL--LSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ W A+I+G ++ S + + LF +M++ G N F SVLS C ++ ++ G++
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDL 392
Query: 432 LVKVGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+ K A F + ++ + G + EAY ++ + W +++A HG
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 165/359 (45%), Gaps = 28/359 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
++ N +I+ Y G +D ARQVFD+MP R LVSWN MI +N + A +L M +
Sbjct: 100 LTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQRE 159
Query: 153 DV----VSWNTMLSGYAQNGYADAARRI----FDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+ +++L A + + ++ N LL Y + G +++A
Sbjct: 160 GTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDA 219
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQN 260
+FES + VV+W+S+ G+V+ + A +F + D+ +++I A
Sbjct: 220 VCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGL 279
Query: 261 NYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
+ E ++ L + ++F ++++ Y + G ++E+ +F + ++N V WNAMI
Sbjct: 280 AAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMI 339
Query: 317 AGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQH--- 369
+G + R LFE M N ++ ++++ G + + FD M +
Sbjct: 340 SGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHL 399
Query: 370 --DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ ++ ++ +++G ++ L + + + S + S+L++C +LEL +
Sbjct: 400 APNVFHYSCMVDTLSRAGQIFEAYDL---ISKLPFNASASMWGSLLASCRTHGNLELAE 455
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 164/360 (45%), Gaps = 36/360 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N+ I + + G D A VF+ MP RS VS+N MI NG+ + A + QM
Sbjct: 98 DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157
Query: 119 ----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYA 170
P + +V+ + + +LS + L K +V +L YA+ G
Sbjct: 158 REGTPFSEFTISSVLCACAAKC-ALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLM 216
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE------------VVS 218
A +F+ M +++ ++W+ + A YVQN E+A LF + WE V+
Sbjct: 217 KDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALF--RKAWETGLKHDQFLMSSVIC 274
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
+ + ++ K++ + + +++I YA+ + E+ ++F + ++V
Sbjct: 275 ACAGLAAMIEGKQVN--ALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEA 334
W AM+SG ++ + E ++F+ M + N V++ ++++ + ++ F+
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDL 392
Query: 335 MT-----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAGYAQSGYSE 388
MT NV ++ M+ +++G+I A +L ++P + S W +++A G E
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLE 452
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L CA L GK H Q++ +G + N L+ MY KCGSV+ A F+E+ +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
++SWNTMI ++G +AL L M+ G + T+ +L AC+ + + + +
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE-CQLLH 188
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
+ + N T ++D+ + G + +A + ++MP + TW ++ Y +
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSMAAG---YVQN 244
Query: 592 ELAEKA 597
E+ E+A
Sbjct: 245 EMYEQA 250
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 143/329 (43%), Gaps = 45/329 (13%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K A D ++ + + + G A+ VF SMP RS V++++M +GY+ N + A
Sbjct: 193 KAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALA 252
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML--SGYAQNGYAD 171
+F + + L ++S + A L M+ + V N +L SG+ N +
Sbjct: 253 LFRKAWETGLKHDQFLMSSVI-----CACAGLAAMIEGKQV---NALLSKSGFCSNIFVA 304
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
++ L+ Y + G IEE+ +F VV WN+++ G + R
Sbjct: 305 SS-----------------LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHAR 347
Query: 232 LGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWT 282
+ +F++M ++V++ ++++ + + Q+ F E +VF ++
Sbjct: 348 SLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYS 407
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDM----ARELFEAMTC 337
MV + G++ EA + +P + S W +++A +++ A++LF+ +
Sbjct: 408 CMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFD-IEP 466
Query: 338 KNVASWNTMITGYAQSG---EITHARNLF 363
N ++ + YA +G E+ R L
Sbjct: 467 HNSGNYLLLSNMYAANGKWDEVAKMRKLL 495
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/435 (47%), Positives = 289/435 (66%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N ++ YA+ G +A ++F++M D ISW +++ G +G E++LRLF EM+ G
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
++ +VLS CA L LE GKQ+H +K G + V N+L+ MY KCG +E+A
Sbjct: 66 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+ + +DVI+W +I GYA++G G+++L + M G+KPD IT +G+L ACSH GLV
Sbjct: 126 FDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLV 185
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E G YF SM YG+ P +HY CM+DLLGR+G+L EA+ L+ M +PDA W ALL
Sbjct: 186 EHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLA 245
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
ACR++G EL E+AA +FE+EP+NA YVLLSNLY+A+G+W + +K R M+ RGV K
Sbjct: 246 ACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKE 305
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G SW+E+ +KVH F D HP IY+ ++E+ +K+ G+V LHD+ EE K
Sbjct: 306 PGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGK 365
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E L YHSEKLAVA+G+L++P G PIR+ KNLR+C DCH A+K++S + R +ILRD+N
Sbjct: 366 ELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNC 425
Query: 764 FHHFSGGSCSCGDYW 778
FHHF G+CSC DYW
Sbjct: 426 FHHFREGACSCSDYW 440
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 14/252 (5%)
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-- 304
E+ N ++ YA+ Y A +FE+ KDV +WT++V+G V NG +EA +F M
Sbjct: 2 ELVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI 61
Query: 305 ----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEI 356
P++ ++ A+++ + ++ +++ + S N++++ YA+ G I
Sbjct: 62 MGIHPDQIVIA--AVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCI 119
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A +FD M D I+W A+I GYAQ+G +SL + +M G + + F +L C
Sbjct: 120 EDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFAC 179
Query: 417 ANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVIS 474
++ +E G+ + +V G + G ++ + + G + EA ++ V D
Sbjct: 180 SHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATV 239
Query: 475 WNTMIAGYARHG 486
W ++A HG
Sbjct: 240 WKALLAACRVHG 251
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
V NAL+ MY K G + A+ FE++ DKDVISW +++ G +G ++AL LF M+ +
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
GI PD I + +LSAC+ ++E G + + + G+ + +V + + G +++
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS-GLGSSLSVDNSLVSMYAKCGCIED 121
Query: 562 AQNLMKNMPFEPDAATWGALL 582
A + +M + D TW AL+
Sbjct: 122 ANKVFDSMEIQ-DVITWTALI 141
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 50/326 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
NA++ Y G D A VF++M +D++SW +++G V N S A LF M
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----NGLLAAYVQNGRIEEAC 205
P + V++ +LS A+ + +++ L+ S N L++ Y + G IE+A
Sbjct: 66 PDQIVIA--AVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+F+S +V++W +L+ G+ + R G F +N MI + +++
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGR-GRESLNF----------YNBMIASGVKPDFI-- 170
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYV 320
T+ ++ G V+ R F +M E + + MI
Sbjct: 171 --------------TFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLG 216
Query: 321 QTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEIT----HARNLFDRMPQHDCISWA 375
++ ++ A+EL M + A+ W ++ G + A NLF+ P+ + + +
Sbjct: 217 RSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPK-NAVPYV 275
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYG 401
+ Y+ +G E++ + MK G
Sbjct: 276 LLSNLYSAAGKWEEAAKTRRLMKLRG 301
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 126/272 (46%), Gaps = 28/272 (10%)
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
E+ N L+ Y + G + A +FE + +V+SW SL+ G V +A +F M +
Sbjct: 2 ELVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI 61
Query: 245 R----DEVSWNTMITGYAQNNYLAEAQRL---FEEAPVKDVFTW-TAMVSGYVQNGKVDE 296
D++ +++ A+ L +++ F ++ + + ++VS Y + G +++
Sbjct: 62 MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMITGYAQ 352
A +FD+M ++ ++W A+I GY Q R + + M V ++ ++ +
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181
Query: 353 SGEITHARNLFDRM---------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+G + H R+ F M P+H +A +I +SG ++ L +M +
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEH----YACMIDLLGRSGKLMEAKELLNQM---AVQ 234
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+ + + ++L+ C ++ELG++ L ++
Sbjct: 235 PDATVWKALLAACRVHGNVELGERAANNLFEL 266
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 116/263 (44%), Gaps = 25/263 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG-----QLDPAR 112
D D+ W +T + NG + AL +F M R + + ++ +L+ L+ +
Sbjct: 30 DKDVISWTSLVTGCVHNGSYEEALRLFCEM-RIMGIHPDQIVIAAVLSACAELTVLEFGK 88
Query: 113 QVFDQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
QV + L S N ++S Y + + A +F+ M +DV++W ++ GYAQNG
Sbjct: 89 QVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG 148
Query: 169 YADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-----W 219
+ ++ M+ + + I++ GLL A G +E F+S + +
Sbjct: 149 RGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHY 208
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEAP 274
++ + +L +AK + ++M V+ D W ++ N L E A LFE P
Sbjct: 209 ACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEP 268
Query: 275 VKDVFTWTAMVSGYVQNGKVDEA 297
K+ + + + Y GK +EA
Sbjct: 269 -KNAVPYVLLSNLYSAAGKWEEA 290
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/573 (37%), Positives = 356/573 (62%), Gaps = 15/573 (2%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW----NTMITGYAQNNYLAEAQRLFEEAP 274
++SL+ + + L DA+ I + N++I Y + +A+A+R+F+ P
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
+D+ +WT++++GY QN DEA + M + N ++ +++ + + +
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 331 LFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ A+T K +V + ++ YA+ G + A +FD++ + +SW A+IAG+A+ G
Sbjct: 187 I-HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
E +L +F EM+R G ++SV S A + +LE GK +H ++K G FVGN
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+L MY K GS+ +A F+ + KDV++WN+M+ +A++G G++A+ FE M+ G+
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ IT + IL+ACSH GLV++G +YF M ++Y + P HY +VDLLGRAG L++A
Sbjct: 366 NQITFLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ MP +P AA WGALLG+CR++ ++ + AA+ +FE++P++ G VLL N+YA++G+W
Sbjct: 425 IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQW 484
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
++VR M+ GVKK SW+E++N VH F D HP + IY EE+ ++++
Sbjct: 485 DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA 544
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+V +T VL V E+E++ L+YHSEK+A+A+ ++++P G IR+MKN+R+C DCH+A
Sbjct: 545 GYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAF 604
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++ISK+ R I++RD NRFHHFS GSCSCGDYW
Sbjct: 605 RYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 162/356 (45%), Gaps = 57/356 (16%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSW----NVMISGYVRNKSLSAARNLFEMMP 150
Y+++I+ LD AR + + N +I Y + +++ AR +F+ MP
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLL--AAYVQNGRIEEA 204
RD+ SW ++++GYAQN D A + ML + N ++ LL A + I E
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 205 CMLFESKANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN- 261
K +W +V ++L+ + + R+ A +FD++ ++ VSWN +I G+A+
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246
Query: 262 ------YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVS 311
AE QR EA FT++++ S G +++ + + M + +
Sbjct: 247 GETTLLMFAEMQRNGFEAT---HFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 303
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
N ++ Y ++ M AR++F+ + K+V +WN+M+T
Sbjct: 304 GNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLT----------------------- 340
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+AQ G +++ F EM++ G LN+ F S+L+ C++ ++ GKQ
Sbjct: 341 --------AFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 147/339 (43%), Gaps = 25/339 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + G A VF+ MP R S+ ++I+GY N D A + M +
Sbjct: 103 NSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFK 162
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPK--------RDVVSWNTMLSGYAQNGYADAARRI 176
+ ++ SA+ + E + DV + +L YA+ G D A +
Sbjct: 163 PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE--SKANWEVV--SWNSLMGGFVKQKRL 232
FD++ KN +SWN L+A + + G E ++F + +E +++S+ L
Sbjct: 223 FDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGAL 282
Query: 233 GDAKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
KW+ M E NT++ YA++ + +A+++F+ KDV TW +M++ +
Sbjct: 283 EQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAF 342
Query: 289 VQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----V 340
Q G EA F+ M + N +++ +++ + ++ F+ M N +
Sbjct: 343 AQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEI 402
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAII 378
+ T++ ++G + A +MP + W A++
Sbjct: 403 DHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 58 DW--DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
DW D+ + + + R G D A+ VF+ + ++ VS+NA+I+G+ G + +F
Sbjct: 195 DWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMF 254
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQN 167
+M + +++ + S +L + + M K NT+L YA++
Sbjct: 255 AEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKS 314
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLM 223
G AR++FDR+ +K+ ++WN +L A+ Q G EA FE V +++ S++
Sbjct: 315 GSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSIL 374
Query: 224 -----GGFVKQKRLGDAKWIFDRM 242
GG VK+ K FD M
Sbjct: 375 TACSHGGLVKE-----GKQYFDMM 393
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/606 (39%), Positives = 346/606 (57%), Gaps = 47/606 (7%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE---APVK 276
+SL+ +++ G A+ +FDRMP ++ V W+ +I GY+ A L E+ A V+
Sbjct: 56 SSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVE 115
Query: 277 -DVFTWTAMVSGYVQNGKVDEA-----RM--------------IFDAMPEKNTVSWNAMI 316
+V TW +VSG ++G+ +A RM A+ + VS +
Sbjct: 116 PNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQV 175
Query: 317 AGYV--------------------QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
GYV + R D +F + +VAS N ++ G +++ ++
Sbjct: 176 HGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQV 235
Query: 357 THARNLFD----RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
+ A LF R + + +SW +I+A Q+G +++ LF M+ G N V
Sbjct: 236 SEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCV 295
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L AN+A+L G+ H ++ GF +VG+AL+ MY KCG A F+ + ++V
Sbjct: 296 LPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNV 355
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWN MI GYA HG +A+ LF SM+ KPD +T +L ACS GL E+G YF
Sbjct: 356 VSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNE 415
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M + +G+ P +HY CMV LLGR+G+LDEA +L+ MPFEPD+ WG+LLG+CR+YG
Sbjct: 416 MQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVL 475
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
LAE AAE +F++EP NAG YVLLSN+YA+ W V++VR +M++ G+KK G SW+E++
Sbjct: 476 LAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIK 535
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
NKVH GD HP I L +L ++ + GF S VLHDV E+EK+++L HSE
Sbjct: 536 NKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSE 595
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLAVA G++S G P+RV+KNLR+C DCH A+K IS R I +RD NRFHHF G C
Sbjct: 596 KLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKC 655
Query: 773 SCGDYW 778
SCGDYW
Sbjct: 656 SCGDYW 661
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 154/369 (41%), Gaps = 75/369 (20%)
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+D F ++++ Y++ G AR +FD MPEKN V W+A+IAGY + A L E M
Sbjct: 50 EDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQM 109
Query: 336 TC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
NV +WN +++G +SG + D++
Sbjct: 110 RSAGVEPNVITWNGLVSGLNRSGR-------------------------------ALDAV 138
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+ M G + + + LS ++ + +GKQ+HG +VK G V AL+ MY
Sbjct: 139 TALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMY 198
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG +E F E DV S N ++AG +R+ +AL+LF G++ + ++
Sbjct: 199 GKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWT 258
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC----------------------- 548
I++ C G + + F +M + GV PNS C
Sbjct: 259 SIVACCVQNGRDLEAVDLFRTM-QSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLR 317
Query: 549 ------------MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+VD+ + G+ A+ + MP + +W A++G ++G A
Sbjct: 318 KGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSR-NVVSWNAMIGGYAMHGD---AAN 373
Query: 597 AAEVIFEME 605
A ++ M+
Sbjct: 374 AVQLFCSMQ 382
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 165/397 (41%), Gaps = 95/397 (23%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
++++ Y+ G AR VFD+MP++++V W+ +I+GY AA L E M +
Sbjct: 56 SSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVE 115
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN-------------------EIS----- 187
+V++WN ++SG ++G A A RM + E+S
Sbjct: 116 PNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQV 175
Query: 188 ---------------WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
L+ Y + GR +E +F ++ +V S N+L+ G + ++
Sbjct: 176 HGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQV 235
Query: 233 GDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF------------------ 270
+A +F R + VSW +++ QN EA LF
Sbjct: 236 SEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCV 295
Query: 271 ---------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
+ + DV+ +A+V Y + GK AR IFDAMP +N
Sbjct: 296 LPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNV 355
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMT-CK---NVASWNTMITGYAQSGEITHARNLFDR 365
VSWNAMI GY A +LF +M CK ++ ++ ++ +Q+G R F+
Sbjct: 356 VSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNE 415
Query: 366 MPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEM 397
M Q IS +A ++ +SG +++ L EM
Sbjct: 416 MQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEM 452
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 19/250 (7%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
S L +C + L + LH V G FV ++LL Y + G+ A F+ +
Sbjct: 23 LPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMP 79
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+K+V+ W+ +IAGY+ G + A L E M++ G++P+ IT G++S + +G
Sbjct: 80 EKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVT 139
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD---EAQNLMKNMPFEPDAATWGALLGAC 585
M+ + G P++ +C + +G + + + DA AL+
Sbjct: 140 ALVRMHSE-GFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALID-- 196
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSN-LYAASGRWGDVSKVRLKMRD---RGVK 641
+YGK A++ V E++ M V N L A R VS+ L R+ RGV
Sbjct: 197 -MYGKCGRADEIVRVFH----ESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGV- 250
Query: 642 KVTGYSWLEV 651
++ SW +
Sbjct: 251 ELNVVSWTSI 260
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
+A++ Y G+ AR +FD MP R++VSWN MI GY + + A LF M K
Sbjct: 328 SALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQK 387
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEEACM 206
D+V++ +L +Q G + RR F+ M + + IS + ++ ++G+++EA
Sbjct: 388 PDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYD 447
Query: 207 LF-ESKANWEVVSWNSLMG 224
L E + W SL+G
Sbjct: 448 LINEMPFEPDSCIWGSLLG 466
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D+ + ++ Y + AR +F+ MP R+VVSWN M+ GYA +G A A ++F M
Sbjct: 323 DVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQ 382
Query: 182 EKNE----ISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRL 232
+ + +++ +L A Q G EE F +S + ++ + +L
Sbjct: 383 KCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKL 442
Query: 233 GDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEAP 274
+A + + MP D W +++ N LAE A++LF+ P
Sbjct: 443 DEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEP 489
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/536 (41%), Positives = 336/536 (62%), Gaps = 10/536 (1%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKN 308
+I Y + + L +A+ +F+E P ++V +WTAM+S Y Q G EA +F M E N
Sbjct: 103 LIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPN 162
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHARNLFD 364
++ ++ + + R++ +N S ++++ YA+SG I A +F
Sbjct: 163 HFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFH 222
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+P+ D ++ AII+GYAQ G E++L+LF +++ G N + SVL+ + LA+L
Sbjct: 223 CLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNH 282
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GKQ+H +++ G + + N+L+ MY KCG+V A F+ + ++ ISWN M+ GY++
Sbjct: 283 GKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSK 342
Query: 485 HGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPN 542
HG ++ L LF+ M+ +KPD IT + +LS CSH L + G E FY+M N G+ P+
Sbjct: 343 HGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPD 402
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
HY C+VDLLGRAGR++EA + +K MPF P AA WG+LLG+CR++ E+ + +
Sbjct: 403 IGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL 462
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+EPENAG YV+LSNLYA++G+W D+ +R M+++ V K G SW+E+ VHTF D
Sbjct: 463 ELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASD 522
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP ++ + ++EL K K+DG+V VL+DV EE+KE +L HSEKLA+A+G+++
Sbjct: 523 HTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIA 582
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P G IRV+KNLR+C DCH+ K +S++ R +ILRD NRFH+ GG CSCGDYW
Sbjct: 583 TPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 56/255 (21%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKN 184
+I Y + L AR +F+ MP+R+VVSW M+S Y+Q G+A A +F ML E N
Sbjct: 103 LIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPN 162
Query: 185 EISWNGLLAAY-----VQNGRIEEACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKW 237
++ +L + + GR + + K N+E + +SL+ + K R+ DA
Sbjct: 163 HFTFATILTSCYGSLGFETGRQIHSIAI---KRNYESHMFVGSSLLDMYAKSGRICDAHG 219
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD-------------------- 277
+F +P RD V+ +I+GYAQ EA +LF + ++
Sbjct: 220 VFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAA 279
Query: 278 -------------------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
V +++ Y + G V AR IFD+MPE+ +SWNAM+ G
Sbjct: 280 LNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 339
Query: 319 YVQTKRMDMARELFE 333
Y + MARE+ E
Sbjct: 340 Y---SKHGMAREVLE 351
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 54/290 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD----- 122
I + + C A +F+ MP+R+ VS+ AMIS Y G A +F +M + D
Sbjct: 104 IVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNH 163
Query: 123 ----------------------------------LVSWNVMISGYVRNKSLSAARNLFEM 148
+ + ++ Y ++ + A +F
Sbjct: 164 FTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHC 223
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY-----VQNG 199
+P+RDVV+ ++SGYAQ G + A ++F ++ + N +++ +L A + +G
Sbjct: 224 LPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHG 283
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+ + +L + ++ VV NSL+ + K + A+ IFD MP R +SWN M+ GY++
Sbjct: 284 KQVHSHVLRSGQYSY-VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSK 342
Query: 260 NNYLAEAQRLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+ E LF EE VK D T+ A++SG D IF M
Sbjct: 343 HGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNM 392
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 119/235 (50%), Gaps = 13/235 (5%)
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
++M G + + S+L+ C + ++ G+++H ++K + ++ L+V+Y K
Sbjct: 50 LLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNK 109
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
C + +A F+E+ ++V+SW MI+ Y++ GF +AL LF M +P+ T I
Sbjct: 110 CDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATI 169
Query: 514 LSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHY--TCMVDLLGRAGRLDEAQNLMKNMP 570
L++C + E G + + ++ R+Y S + + ++D+ ++GR+ +A + +P
Sbjct: 170 LTSCYGSLGFETGRQIHSIAIKRNY----ESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE--NAGMYVLLSNLYAASG 623
E D A++ Y + L E+A ++ +++ E N+ S L A SG
Sbjct: 226 -ERDVVACTAIISG---YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSG 276
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 59/287 (20%)
Query: 77 CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL------------- 123
CD A VF+ +P R V+ A+ISGY G + A ++F Q+ +
Sbjct: 215 CD-AHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 273
Query: 124 --------------------------VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
V N +I Y + ++ AR +F+ MP+R +SW
Sbjct: 274 LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISW 333
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV----QNGRIEEACM-LFESKA 212
N ML GY+++G A +F M E+N++ + + V +G++E+ + +F +
Sbjct: 334 NAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 393
Query: 213 NW------EVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMITGYAQNNYLAE 265
N ++ + ++ + R+ +A +MP V W +++ G + + E
Sbjct: 394 NGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL-GSCRVHSDVE 452
Query: 266 -----AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
Q+L E P ++ + + + Y GK ++ R I D M EK
Sbjct: 453 IGIIVGQKLLELEP-ENAGNYVILSNLYASAGKWEDMRNIRDLMQEK 498
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/541 (40%), Positives = 328/541 (60%), Gaps = 39/541 (7%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--------MDMA 328
D+ T +++ Y + G VD AR +FD MP ++ VSWN MI Q + M
Sbjct: 98 DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157
Query: 329 RE--------------------------LFEAMTCK-----NVASWNTMITGYAQSGEIT 357
RE L A K NV ++ YA+ G +
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F+ MP ++W+++ AGY Q+ E +L LF + G + ++ +SV+ CA
Sbjct: 218 DAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACA 277
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
LA++ GKQ++ L K GF + FV ++L+ MY KCG +EE+Y F ++ ++V+ WN
Sbjct: 278 GLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNA 337
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI+G +RH + ++LFE M+ +G+ P+D+T V +LSAC H GLV KG +YF M +++
Sbjct: 338 MISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEH 397
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ PN HY+CMVD L RAG++ EA +L+ +PF A+ WG+LL +CR +G ELAE A
Sbjct: 398 HLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVA 457
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
A+ +F++EP N+G Y+LLSN+YAA+G+W +V+K+R +++ VKK G SW+E+++KVH
Sbjct: 458 AKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHL 517
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F VG+ HP+ IY+ L E+ +L++ G+ T+ LH VGE K+ +LR+HSEKLA
Sbjct: 518 FMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFT 577
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
G+L +P PIR+MKNLR+C DCH+ +K SK R +I+RD NRFHHF G CSCGD+
Sbjct: 578 MGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDF 637
Query: 778 W 778
W
Sbjct: 638 W 638
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 180/403 (44%), Gaps = 52/403 (12%)
Query: 103 LLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLS 162
LL G+ A Q+ + DL++ N++I+ Y + S+ AR +F+ MP R +VSWNTM+
Sbjct: 80 LLQGKACHA-QILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIG 138
Query: 163 GYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML--FESKA--NW 214
QNG + A + +M + +E + + +L A + E +L F KA +
Sbjct: 139 SLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDL 198
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA- 273
V +L+ + K + DA +F+ MP R V+W++M GY QN +A LF +A
Sbjct: 199 NVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAW 258
Query: 274 ---PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG-----YVQTKRM 325
D F ++++ + E + + +A+ K+ N +A Y + +
Sbjct: 259 ETGLKHDQFLMSSVICACAGLAAMIEGKQM-NALLSKSGFCSNIFVASSLIDMYAKCGGI 317
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ + ++F + +NV WN MI+G ++ HAR+L
Sbjct: 318 EESYKVFRDVEKRNVVLWNAMISGLSR-----HARSL----------------------- 349
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-GCFVG 444
+ + LF +M++ G N F SVLS C ++ + G++ + K A F
Sbjct: 350 ---EVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHY 406
Query: 445 NALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+ ++ + G + EAY ++ + W +++A HG
Sbjct: 407 SCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 165/359 (45%), Gaps = 28/359 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
++ N +I+ Y G +D ARQVFD+MP R LVSWN MI +N + A +L M +
Sbjct: 100 LTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQRE 159
Query: 153 DV----VSWNTMLSGYAQNGYADAARRI----FDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+ +++L A + + ++ N LL Y + G +++A
Sbjct: 160 GTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDA 219
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQN 260
+FES + VV+W+S+ G+V+ + A +F + D+ +++I A
Sbjct: 220 VCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGL 279
Query: 261 NYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
+ E ++ L + ++F ++++ Y + G ++E+ +F + ++N V WNAMI
Sbjct: 280 AAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMI 339
Query: 317 AGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQH--- 369
+G + R LFE M N ++ ++++ G + + FD M +
Sbjct: 340 SGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHL 399
Query: 370 --DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ ++ ++ +++G ++ L + + + S + S+L++C +LEL +
Sbjct: 400 APNVFHYSCMVDTLSRAGQIFEAYDL---ISKLPFNASASMWGSLLASCRTHGNLELAE 455
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 164/360 (45%), Gaps = 36/360 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N+ I + + G D A VF+ MP RS VS+N MI NG+ + A + QM
Sbjct: 98 DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157
Query: 119 ----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYA 170
P + +V+ + + +LS + L K +V +L YA+ G
Sbjct: 158 REGTPFSEFTISSVLCACAAKC-ALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLM 216
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE------------VVS 218
A +F+ M +++ ++W+ + A YVQN E+A LF + WE V+
Sbjct: 217 KDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALF--RKAWETGLKHDQFLMSSVIC 274
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
+ + ++ K++ + + +++I YA+ + E+ ++F + ++V
Sbjct: 275 ACAGLAAMIEGKQMN--ALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEA 334
W AM+SG ++ + E ++F+ M + N V++ ++++ + ++ F+
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDL 392
Query: 335 MT-----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAGYAQSGYSE 388
MT NV ++ M+ +++G+I A +L ++P + S W +++A G E
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLE 452
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L CA L GK H Q++ +G + N L+ MY KCGSV+ A F+E+ +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
++SWNTMI ++G +AL L M+ G + T+ +L AC+ + + + +
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE-CQLLH 188
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
+ + N T ++D+ + G + +A + ++MP + TW ++ Y +
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSMAAG---YVQN 244
Query: 592 ELAEKA 597
E+ E+A
Sbjct: 245 EMYEQA 250
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 143/329 (43%), Gaps = 45/329 (13%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K A D ++ + + + G A+ VF SMP RS V++++M +GY+ N + A
Sbjct: 193 KAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALA 252
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML--SGYAQNGYAD 171
+F + + L ++S + A L M+ + + N +L SG+ N +
Sbjct: 253 LFRKAWETGLKHDQFLMSSVI-----CACAGLAAMIEGKQM---NALLSKSGFCSNIFVA 304
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
++ L+ Y + G IEE+ +F VV WN+++ G + R
Sbjct: 305 SS-----------------LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHAR 347
Query: 232 LGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWT 282
+ +F++M ++V++ ++++ + + Q+ F E +VF ++
Sbjct: 348 SLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYS 407
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDM----ARELFEAMTC 337
MV + G++ EA + +P + S W +++A +++ A++LF+ +
Sbjct: 408 CMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFD-IEP 466
Query: 338 KNVASWNTMITGYAQSG---EITHARNLF 363
N ++ + YA +G E+ R L
Sbjct: 467 HNSGNYLLLSNMYAANGKWDEVAKMRKLL 495
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/750 (33%), Positives = 418/750 (55%), Gaps = 46/750 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+ I + + + A VF+ + +R++ S++ ++ Y+ N A +V+ +M +++
Sbjct: 6 NMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKE-- 63
Query: 125 SWNVMISGYVRNKSLSAARNLF-------------EMMPKRDVVSWNTMLSGYAQNGYAD 171
+ I Y + L+A L E+ ++DVV +++ +A+ G +
Sbjct: 64 ---ISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 172 AARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGF 226
A +F M ++ IS ++ AYV++G+ + A + + ++ +++G
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 227 VKQKRLGDAKWI---------FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
L D K I F + VR N +IT YA+ L +++ LF VKD
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVR-----NALITMYAKCGSLKDSKSLFLTMDVKD 235
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFE 333
V +W AM++ Y G +A +F M + ++++++ KR++ R L
Sbjct: 236 VVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHV 295
Query: 334 AMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+T + + A N +I+ + + G + AR F + + + +W ++A YAQ +D
Sbjct: 296 RITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKD 355
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L L+ M G +R F+SV+ +CA+L +L GK +H GFE +G AL+
Sbjct: 356 ALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVN 415
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KCGS+ +A +F+ I +KDV+SW+ MIA A+HG ++AL L M GI +++T
Sbjct: 416 MYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVT 475
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+L ACSH G + +G +YF +++D+G+ + ++ +DLLGRAG L EA++++ M
Sbjct: 476 ASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTM 535
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
PF+ LLG C+++G + + I +EPEN G YVLL+N+YAA+GRW DV+
Sbjct: 536 PFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVA 595
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK-QDGFV 688
K+R MR +GVK+ TG S +E ++K++ FSVGDT +P I A LE L ++K ++G+V
Sbjct: 596 KLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYV 655
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T+ V HDV +++KE +L++HSEK+A+ +G+++ P G +R++KNLRVC DCH K
Sbjct: 656 PDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLA 715
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKI GR II+RD RFHHF GG CSCGDYW
Sbjct: 716 SKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 184/431 (42%), Gaps = 80/431 (18%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D F ++ Y + ++AR +FD + ++N SW+ ++ YVQ A E+++ M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 337 -----------------C----------------------KNVASWNTMITGYAQSGEIT 357
C K+V ++I +A+ G +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 358 HARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A ++F M D IS A+I Y + G ++ +L + +M+ G + + ++L C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
++ L GK +H +++ V NAL+ MY KCGS++++ F + KDV+SWN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS-----------HTGLVEK 525
MIA Y +G KDA LF M T+G PD T IL AC+ H + +
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300
Query: 526 GTEYFYSMNRDY-------GVIPNSKHYTCMVD---------LLGRAGRLDEAQN---LM 566
G + ++M + G + +++ Y ++ +L + D+ ++ L
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360
Query: 567 KNM---PFEPDAATWGALLGACRLYGKTE----LAEKAAEVIFEMEPENAGMYVLLSNLY 619
KNM F PD T+ +++ +C G + E + FE ++ + L N+Y
Sbjct: 361 KNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFE---KDVILGTALVNMY 417
Query: 620 AASGRWGDVSK 630
A G D K
Sbjct: 418 AKCGSLADAKK 428
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/639 (38%), Positives = 372/639 (58%), Gaps = 22/639 (3%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
MLS Y+Q G A R+ FD M + +SWN L+AAY+ N R + C LF + ++
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGN-RDFDRCWLFFRGMLLQGINP 59
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVR----------DEVSWNTMITGYAQNNYLAEAQRL 269
+ G + DA+ I ++ + + +++ Y + + +A +
Sbjct: 60 GEV-GISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASV 118
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNT-VSWNAMIAGYVQT 322
F +DV W+AMV+ Y +NG EA +F M P K T VS A
Sbjct: 119 FLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL 178
Query: 323 KRMDMARELFEAMTCKN-VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
+ + + EA ++ V ++ Y + G I A F ++ + + ++W+AI A Y
Sbjct: 179 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAY 238
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH--GQLVKVGFEA 439
A++ + D++R+ M G N + F SVL CA +A+L+ G+++H Q++ G E+
Sbjct: 239 ARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLES 298
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
+V AL+ MY KCG++ A F++I D++ WN++IA A+HG + AL LFE M+
Sbjct: 299 DVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMR 358
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
G++P IT +L ACSH G++++G ++F S D+G+ P ++H+ CMVDLLGRAG +
Sbjct: 359 LEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWI 418
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
++++L+ +MPFEP W A LGACR Y + A AAE +F+++P YVLLSN+Y
Sbjct: 419 VDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMY 478
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A +GRW DV+++R M+ K G SW+EV+++VH F GD HP I+A L+ L
Sbjct: 479 AKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLT 538
Query: 680 FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCE 739
+K+ G+V T++VLHDV +E KE M+ YHSEKLA+A+ +L+ P G PIRV+KNLRVC
Sbjct: 539 KLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCN 598
Query: 740 DCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH A K ISK+V R I++RD NRFH F G+CSCGDYW
Sbjct: 599 DCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 171/388 (44%), Gaps = 59/388 (15%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS------------------- 138
M+S Y G + R+ FD+MP D+VSWN +I+ Y+ N+
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 139 -------LSAARNLFEMMPKRDV-------------VSWNTMLSGYAQNGYADAARRIFD 178
LSA + E+ R + + ++S Y + G+ A +F
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN--SLMGGFVKQKRLGDAK 236
RM ++ ++W+ ++AAY +NG EA LF + + + V+ N +L+ G LGD +
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFR-QMDLDGVAPNKVTLVSGLDACASLGDLR 179
Query: 237 ---WIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
+ R+ + V ++ Y + + A F + K+V W+A+ + Y
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYA 239
Query: 290 QNGKVDEA-----RMIFDAMPEKNT-----VSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+N + +A RM + + +T + A IA Q +R+ ++ +
Sbjct: 240 RNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
V ++ Y++ G + A ++FD++ D + W ++IA AQ G +E +L LF M+
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRL 359
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQ 427
G + FTSVL C++ L+ G++
Sbjct: 360 EGLQPTIITFTSVLFACSHAGMLDQGRK 387
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 136/306 (44%), Gaps = 24/306 (7%)
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
L + + S+ A++S Y G A VF +M RD+V+W+ M++ Y RN
Sbjct: 85 LAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPR 144
Query: 141 AARNLFEMMPKRDVVSWN--TMLSGYAQNGYADAAR-------RIFDRMLEKNEISWNGL 191
A LF M D V+ N T++SG R R+ + ++ + L
Sbjct: 145 EALGLFRQM-DLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTAL 203
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDE 247
+ Y + GRIE A F VV+W+++ + + R DA + RM V +
Sbjct: 204 VNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNS 263
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPV------KDVFTWTAMVSGYVQNGKVDEARMIF 301
++ +++ A L + +R+ E V DV+ TA+V+ Y + G + A +F
Sbjct: 264 TTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMF 323
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEIT 357
D + + V WN++IA Q + + A ELFE M + + ++ +++ + +G +
Sbjct: 324 DKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLD 383
Query: 358 HARNLF 363
R F
Sbjct: 384 QGRKHF 389
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 24/265 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSV--SYNAMIS-GYLLNGQLDP 110
D+ W+ + + RNG AL +F M P + ++ +A S G L +G L
Sbjct: 126 DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMH 185
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
R V Q Q +V +++ Y + + AA F + +++VV+W+ + + YA+N
Sbjct: 186 QR-VEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRN 244
Query: 171 DAARRIFDRM----LEKNEISWNGLL------AAYVQNGRIEEACMLFESKANWEVVSWN 220
A R+ RM L N ++ +L AA Q RI E + +V
Sbjct: 245 RDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLT 304
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVK 276
+L+ + K L A +FD++ D V WN++I AQ+ +A LFE E
Sbjct: 305 ALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 364
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIF 301
+ T+T+++ G +D+ R F
Sbjct: 365 TIITFTSVLFACSHAGMLDQGRKHF 389
>gi|144923519|gb|ABP02617.1| Ankyrin; Pentatricopeptide repeat [Medicago truncatula]
Length = 293
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/270 (74%), Positives = 235/270 (87%)
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T VG+L ACSHTGL ++GTEYFYSM++DYG+ PNSKHY CM+DLLGRAG L+EA NLM+N
Sbjct: 24 TGVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRN 83
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MPFEPDAATWGALLGA R++G EL EKAAE++F MEP NAGMYVLLSNLYA G+W DV
Sbjct: 84 MPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDV 143
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
K+RLKMR G++K+ GYSW+EVQNK+H F+VGD HPEKDRIYAYLEE++ K+K +G V
Sbjct: 144 GKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMKHEGHV 203
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
KLVLHDV EEEK+ ML+YHSEKLAVA+GIL+IPAGRPIRVMKNLRVCEDCHN IK+I
Sbjct: 204 SLVKLVLHDVEEEEKKRMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCEDCHNVIKYI 263
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKIVGRLIILRD++RFH+ S G CSCGDYW
Sbjct: 264 SKIVGRLIILRDSHRFHYVSEGICSCGDYW 293
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/617 (38%), Positives = 372/617 (60%), Gaps = 25/617 (4%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I Y G +D AR++FD+M +R++ SWN +I + ++ L A ++FE MP+ D
Sbjct: 58 NRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQC 117
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY--VQNGRIEEACMLFE 209
SWN+M+SG+ Q+G D A F +M NE S+ L+A +Q+ ++
Sbjct: 118 SWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLV 177
Query: 210 SKANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
++N+ +V ++L+ + K R+ A+ +FD M VR VSWN++IT Y QN + EA
Sbjct: 178 YRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEAL 237
Query: 268 RLF----------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
++F +E + V + A +S ++ G+ AR++ + + NA++
Sbjct: 238 KIFVEMIKCGVEPDEVTLASVVSACATISA-IKEGQQIHARVVKCDEFRNDLILGNALLD 296
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + R++ AR +F+ M ++V S +M++GYA++ ++ AR +F M D I+W A+
Sbjct: 297 MYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNAL 356
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IAG Q+G +E++L LF +KR F ++L+ CANLA L+LG+Q H ++K GF
Sbjct: 357 IAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGF 416
Query: 438 ------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
++ FVGN+L+ MY KCGSVE F+ +++KD +SWN MI GYA++GFG A
Sbjct: 417 RFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKA 476
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L +F M G PD +TM+G+L ACSH GL+++G YF SM +G++P HYTCMVD
Sbjct: 477 LEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVD 536
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG L+EA+NL++ M +PDA WG+LL AC+++ +L E + + E++PEN+G
Sbjct: 537 LLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGP 596
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVLLSN+YA + W +V +VR MR RGV K G SW+E+Q +++ F V D H K I
Sbjct: 597 YVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEI 656
Query: 672 YAYLEELEFKLKQDGFV 688
Y L + ++KQ G+V
Sbjct: 657 YMVLRTILQQMKQAGYV 673
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 228/496 (45%), Gaps = 76/496 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
+I WN I ++G D A+H+F MP+ S+N+MISG+ +G+ D A F QM
Sbjct: 84 NIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMH 143
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
D+ + ++ Y + +
Sbjct: 144 GHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVE 203
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYV 196
A+++F+ M R VSWN++++ Y QNG D A +IF M+ E +E++ +++A
Sbjct: 204 YAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACA 263
Query: 197 QNGRIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
I+E + +++ N+L+ + K R+ +A+ IFD MP+R VS
Sbjct: 264 TISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSET 323
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-- 309
+M++GYA+ + + A+ +F VKDV TW A+++G QNG+ +EA ++F + ++
Sbjct: 324 SMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWP 383
Query: 310 --VSWNAMIAGYVQTKRMDMAREL----------FEAMTCKNVASWNTMITGYAQSGEIT 357
++ ++ + + R+ F+ +V N++I Y + G +
Sbjct: 384 THYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVE 443
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+ +F M + DC+SW A+I GYAQ+G+ +L +F +M GE + VL C+
Sbjct: 444 NGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACS 503
Query: 418 NLASLELGKQL-------HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VD 469
+ L+ G+ HG L+ + C V + + G +EEA + EE+ +
Sbjct: 504 HAGLLDEGRYYFRSMTAQHG-LMPLKDHYTCMVD-----LLGRAGYLEEAKNLIEEMSMQ 557
Query: 470 KDVISWNTMIAGYARH 485
D I W +++A H
Sbjct: 558 PDAIVWGSLLAACKVH 573
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 165/353 (46%), Gaps = 71/353 (20%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ F ++ Y + G VD AR +FD M E+N SWN++I + ++ +D A +FE M
Sbjct: 53 ETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP 112
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+ SWN+MI+G+ Q G FD ++L F +
Sbjct: 113 QVDQCSWNSMISGFEQHGR-------FD------------------------EALVYFAQ 141
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M +G +N F S LS CA L L+LG Q+H + + + + ++G+AL+ MY KCG
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
VE A F+E+ + +SWN++I Y ++G +AL +F M G++PD++T+ ++SA
Sbjct: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261
Query: 517 CSHTGLVEKGTEYFYSMN-----RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
C+ +++G + + R+ ++ N+ ++D+ + R++EA+ + MP
Sbjct: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNA-----LLDMYAKCNRINEARIIFDMMPI 316
Query: 572 EP------------------------------DAATWGALLGACRLYGKTELA 594
D TW AL+ C G+ E A
Sbjct: 317 RSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEA 369
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 17/269 (6%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L+ SPF+ +L+ CA S ++H ++K F + F+ N L+ +Y KCG V+ A
Sbjct: 17 LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+ ++++++ SWN++I + + GF DA+ +FE M V D + ++S G
Sbjct: 77 FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQV----DQCSWNSMISGFEQHGRF 132
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD-----EAQNLMKNMPFEPDAATW 578
++ YF M+ +G + N Y+ L AG D + +L+ + D
Sbjct: 133 DEALVYFAQMH-GHGFLVN--EYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG 189
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
AL+ +Y K E A V EM + + L Y +G + K+ ++M
Sbjct: 190 SALVD---MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKC 246
Query: 639 GVK--KVTGYSWLEVQNKVHTFSVGDTLH 665
GV+ +VT S + + G +H
Sbjct: 247 GVEPDEVTLASVVSACATISAIKEGQQIH 275
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N I +M+ G ++ VF M + VS+NAMI GY NG + A +VF +
Sbjct: 423 DSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCK 482
Query: 118 MPQRDLVSWNVMISGYVRNKS----LSAARNLFE-------MMPKRDVVSWNTMLSGYAQ 166
M + +V + G + S L R F +MP +D + M+ +
Sbjct: 483 MLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKD--HYTCMVDLLGR 540
Query: 167 NGYADAARRIFDRM-LEKNEISWNGLLAA 194
GY + A+ + + M ++ + I W LLAA
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAA 569
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/635 (39%), Positives = 356/635 (56%), Gaps = 46/635 (7%)
Query: 164 YAQNGYADAARRIFDRMLE--------KNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
Y++ G +AR +FD N N +L AY GR EA L+
Sbjct: 68 YSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMG 127
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
V N+ FV + + +F + V + TG+
Sbjct: 128 V-GVNNFTYPFVLKVCASELGAVFGEV-----VHGQVVRTGFGS---------------- 165
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
D+F A+V Y + G++ +A +FD M ++ V W AMI Y Q +R A LF M
Sbjct: 166 -DLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKM 224
Query: 336 T----CKNVASWNTMITGYAQSGE----ITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ + ++ + Q G+ I+ AR +FDRM + + ISW ++++GY Q+G
Sbjct: 225 QEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRP 284
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVL--STCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
D+L LF +M+ + +P T+++ S C+ L S LG++LH ++ + + N
Sbjct: 285 TDALSLFNQMQ--ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRN 342
Query: 446 ALLVMYCKCGSVEEAYHAFE--EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
A++ MY KCG ++ A F E+ ++DV SWN +I+GY HG GK+AL LF M+ G+
Sbjct: 343 AIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGV 402
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+DIT ILSACSH GL+++G + F M + V P KHY CMVD+LGRAG L+EA
Sbjct: 403 EPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAF 461
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
L+K +P P WGALL ACR++G TEL E AA +F++EPE+ G YVL+SN+YAAS
Sbjct: 462 RLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASN 521
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W +V VR M+ RG+KK +S +E +VH F D P +Y +E L ++K
Sbjct: 522 KWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMK 581
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
G+V VLHDV E+KEH+L YHSEKLAVA+GI+ + G PI+V KNLRVC DCH
Sbjct: 582 MVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHW 641
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A K IS I GR II+RD NRFHHF GG CSCGDYW
Sbjct: 642 AFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAA--------IIAGYAQSGYSEDSLRLFIEM 397
+I Y++ G++ AR LFD H A ++ YA +G S +++ L+I M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+R G +N + VL CA+ G+ +HGQ+V+ GF + FV AL+ MY KCG +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+A+ F+ ++ +DV+ W MI Y + ALMLF M+ G D+IT + + SA
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243
Query: 518 SHTG----LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM---P 570
G + + F M G+ NS M+ + GR +A +L M
Sbjct: 244 GQLGDGRMAISRARLVFDRMEERNGISWNS-----MLSGYTQNGRPTDALSLFNQMQASE 298
Query: 571 FEPDAATWGALLGACRLYGKTELAEK 596
+P+ T ++ AC G L K
Sbjct: 299 CDPNPVTALIMVSACSYLGSKHLGRK 324
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 143/338 (42%), Gaps = 68/338 (20%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR---- 152
A++ Y G++ A +VFD+M RD+V W MI+ Y + + A LF M +
Sbjct: 172 ALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG 231
Query: 153 DVVSWNTMLSGYAQNG----YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
D ++ ++ S Q G AR +FDRM E+N ISWN +L+ Y QNGR +A LF
Sbjct: 232 DEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 291
Query: 209 ---------------------------------------ESKANWEVVSWNSLMGGFVKQ 229
SK + + N++M ++K
Sbjct: 292 NQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKC 351
Query: 230 KRLGDAKWIFDRMPV--RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTA 283
L A +F+ + RD SWN +I+GY + + EA LF V+ V T+T+
Sbjct: 352 GDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTS 411
Query: 284 MVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
++S G +DE R F M PE + M+ + ++ A L + +
Sbjct: 412 ILSACSHAGLIDEGRKCFADMTKLSVRPEMK--HYACMVDMLGRAGFLNEAFRLIKKIPS 469
Query: 338 K-NVASWNTM-----ITGYAQSGEITHARNLFDRMPQH 369
+ + W + I G + GEI A NLF P+H
Sbjct: 470 RPSDEVWGALLLACRIHGNTELGEIA-ANNLFQLEPEH 506
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 27/298 (9%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL----VSWNVMISG--YVRN 136
VF+ M R+ +S+N+M+SGY NG+ A +F+QM + V+ +M+S Y+ +
Sbjct: 259 VFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGS 318
Query: 137 KSLSAARNLFEMMPKRDVVSW--NTMLSGYAQNGYADAARRIFD--RMLEKNEISWNGLL 192
K L + F + K D+ + N ++ Y + G D A +F+ + E++ SWN L+
Sbjct: 319 KHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLI 378
Query: 193 AAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIF---DRMPVR 245
+ Y +G +EA LF V +++ S++ + + + F ++ VR
Sbjct: 379 SGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVR 438
Query: 246 DEVS-WNTMITGYAQNNYLAEAQRLFEEAPVKDV-FTWTAM-----VSGYVQNGKVDEAR 298
E+ + M+ + +L EA RL ++ P + W A+ + G + G++ A
Sbjct: 439 PEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEI-AAN 497
Query: 299 MIFDAMPEKNT--VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
+F PE V + + A + K ++M R+ ++ K A+++ + G G
Sbjct: 498 NLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHG 555
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 26/268 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQ----VF 115
WN ++ + +NG AL +FN M + V+ M+S G R+ V
Sbjct: 271 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 330
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFE--MMPKRDVVSWNTMLSGYAQNGYADAA 173
D N ++ Y++ L A +F + +RDV SWN ++SGY +G+ A
Sbjct: 331 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 390
Query: 174 RRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGG 225
+F RM +E N+I++ +L+A G I+E F E+ + ++
Sbjct: 391 LELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDM 450
Query: 226 FVKQKRLGDAKWIFDRMPVR--DEVSWNTMITG--YAQNNYLAE--AQRLFEEAPVKDVF 279
+ L +A + ++P R DEV W ++ N L E A LF+ P +
Sbjct: 451 LGRAGFLNEAFRLIKKIPSRPSDEV-WGALLLACRIHGNTELGEIAANNLFQLEPEHTGY 509
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+ M + Y + K E M+ M +
Sbjct: 510 -YVLMSNIYAASNKWKEVEMVRQNMKSR 536
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 272/753 (36%), Positives = 398/753 (52%), Gaps = 76/753 (10%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN-----KSLSAARNLF--EM 148
A++ Y G ++ A +VF ++ DL+ WN I N ++L R ++ +
Sbjct: 174 TALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGL 233
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEA 204
+P R S+ +LS + AR I R+ E + + L+ Y + G ++E+
Sbjct: 234 LPNR--ASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDES 291
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQN 260
+FE+ A VSWN+++ F + A I+ RM +++++ T + +
Sbjct: 292 IAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 351
Query: 261 NYLAEAQRLFEEAPVK----------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+ +Q L E A + DV TA+V+ Y G +D AR FDA+P KN V
Sbjct: 352 S----SQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 407
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW---------- 343
SWNAM+ Y R A ELF AM C++V+
Sbjct: 408 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGN 467
Query: 344 ----------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
N ++ +A+SG + A FD D +SW +A + ++
Sbjct: 468 GLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITA 527
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYC 452
F M+ G R ++ SV+ CA+L +LELG+ + QL + E V +A++ M
Sbjct: 528 FYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVA 587
Query: 453 KCGS-VEEAYHAFEEIVD--KDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDI 508
KCGS V+E F + D KD+++WNTMIA YA+HG G+ AL LF M+ ++PD
Sbjct: 588 KCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSS 647
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS-KHYTCMVDLLGRAGRLDEAQNLMK 567
T V +LS CSH GLVE G F+ G+ +HY C+VD+LGR G L EA++ ++
Sbjct: 648 TFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIR 707
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP D+ W +LLGAC YG E E+AA E+ ++ YV+LSN+YAA+GRW D
Sbjct: 708 KMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWED 767
Query: 628 VSKVRLKMRDRGVKK-VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+VR M +R VKK V G S + V+N+VH F D HP+ D IYA LE L+ +++ G
Sbjct: 768 SIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAG 827
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T+LVLHDV EE+KE +L YHSEKLA+A+G++S+P IRV+KNLRVC+DCH A K
Sbjct: 828 YVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATK 887
Query: 747 HISKIVGRLIILRDNNRFHHFS-GGSCSCGDYW 778
I+++ R I +RD NRFHHF G CSCGDYW
Sbjct: 888 FIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 231/544 (42%), Gaps = 73/544 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ +T + R G D ++ VF +M R+ VS+NAMI+ + G A ++ +M
Sbjct: 271 DVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ 330
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----------KRDVVSWNTMLSGYAQNGY 169
Q + ++ S++++L E + DV+ +++ Y G
Sbjct: 331 QEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGA 390
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGG 225
D AR FD + KN +SWN +L AY NGR EA LF + + VS+ +++G
Sbjct: 391 IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGC 450
Query: 226 F--VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
V + R A+ + + + ++ N ++ +A++ L EA F+ VKD +W
Sbjct: 451 CEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNT 510
Query: 284 MVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
V+ + A F M P+K T+ + + T +++ R + + ++
Sbjct: 511 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGT--LELGRSIQQQLSA 568
Query: 338 -----KNVASWNTMITGYAQSG-EITHARNLFDRMP--QHDCISWAAIIAGYAQSGYSED 389
++V + ++ A+ G + LF RMP + D ++W +IA YAQ G+
Sbjct: 569 AIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRK 628
Query: 390 SLRLF-IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+L+LF I +R R + S F SVLS C+ H LV+ G F+ +L
Sbjct: 629 ALKLFRIMQQRSSVRPDSSTFVSVLSGCS-----------HAGLVEDGIHC-FFLAREVL 676
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
I + V + ++ R G+ ++A M + D +
Sbjct: 677 -----------------GIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMP---LPADSV 716
Query: 509 TMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+L ACS G +E G F + R +S Y + ++ AGR +++ +
Sbjct: 717 VWTSLLGACSSYGDLEGGERAARAFIELYRS-----DSVGYVVLSNIYAAAGRWEDSIRV 771
Query: 566 MKNM 569
++M
Sbjct: 772 REDM 775
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 180/407 (44%), Gaps = 66/407 (16%)
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
R+I + L +N++ N L+ Y + +++A F + + + +WN+L+ +
Sbjct: 48 RQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVF 107
Query: 234 DAKWIFDRMPVRDE-----------------VSWNTMITGYAQNNYLAEAQRLFEEAP-- 274
D ++ RM + + S + + ++ +A+A+ + ++
Sbjct: 108 D---LYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGS 164
Query: 275 --VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI-AGYVQTKRMDMAREL 331
+D+F TA++ Y + G V+ A +F + + + WNA I A +R D A L
Sbjct: 165 DLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLL 224
Query: 332 FEAM-----------------TC----------------------KNVASWNTMITGYAQ 352
M +C +V ++T Y +
Sbjct: 225 VRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGR 284
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G + + +F+ M + +SW A+IA +AQ G+ + ++ M++ G R N+ F +
Sbjct: 285 CGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTA 344
Query: 413 LSTCANLASLELGKQ--LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
L + +S +LG+ LHG + G E VG AL+ MY G+++ A AF+ I K
Sbjct: 345 LKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK 404
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+++SWN M+ Y +G ++A+ LF +MK + P+ ++ + +L C
Sbjct: 405 NIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC 451
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 119/299 (39%), Gaps = 46/299 (15%)
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
R I +N + N ++ Y + + +D A F A+ + +A+WNT+I + +
Sbjct: 48 RQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVF 107
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+L+ RM + R R N+ +VL A
Sbjct: 108 ---DLYTRMKLEE----------------------------RAENRPNKLTIIAVLGAIA 136
Query: 418 N----------LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
+ S+ + +H + E FV ALL Y KCG VE A F I
Sbjct: 137 SGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRI 196
Query: 468 VDKDVISWNTMIAGYARHGFGKD-ALMLFESMKTVGIKPDDITMVGILSAC-SHTGLVEK 525
D+I WN I A + D AL+L M G+ P+ + V ILS+C H+ L
Sbjct: 197 QVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSL--P 254
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
++ + G + + T +V + GR G +DE+ + + M + +W A++ A
Sbjct: 255 LARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVR-NHVSWNAMIAA 312
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+L C A L G+QLH Q+VK G +GN L+ MY KC S+++A AF +
Sbjct: 27 LAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALR 86
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ + +WNT+IA + D + + +P+ +T++ +L A + +
Sbjct: 87 SRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSS 146
Query: 529 YFYSMNRDYGVIPNSKH---------YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
S+ + V + + T ++D G+ G ++ A + + PD W
Sbjct: 147 RAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDLICWN 205
Query: 580 ALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSN 617
A + AC G E ++A ++ M P A +LS+
Sbjct: 206 AAIMAC--AGNDERPDRALLLVRRMWLEGLLPNRASFVAILSS 246
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-----SYNAMISGYLLNGQLD 109
P D+ WN I + ++G AL +F M +RSSV ++ +++SG G ++
Sbjct: 604 PDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVE 663
Query: 110 P-------ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTML 161
AR+V + Q+ + + ++ R L A + MP D V W ++L
Sbjct: 664 DGIHCFFLAREVLG-IEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLL 722
Query: 162 ---SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
S Y + A R F + + + + L Y GR E++ + E A V
Sbjct: 723 GACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRV 780
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/578 (39%), Positives = 346/578 (59%), Gaps = 27/578 (4%)
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE--AQRLF-----EEAPVKDVF 279
+ + L A IF++MP R+ SWNT+I G+++++ A LF +E + F
Sbjct: 70 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF 129
Query: 280 TWTAMVSGYVQNGKVDEARMIF----------DAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
T+ +++ + GK+ E + I D N V M G+++ R+ +
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM-CGFMKDARVLFYK 188
Query: 330 ELFE----AMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ E MT + + WN MI GY + G+ AR LFD+M Q +SW +I+G
Sbjct: 189 NIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISG 248
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Y+ +G+ +D++ +F EMK+ R N SVL + L SLELG+ LH G
Sbjct: 249 YSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRID 308
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+G+AL+ MY KCG +E+A H FE + ++VI+W+ MI G+A HG DA+ F M+
Sbjct: 309 DVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G++P D+ + +L+ACSH GLVE+G YF M G+ P +HY CMVDLLGR+G LD
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA+ + NMP +PD W ALLGACR+ G E+ ++ A ++ +M P ++G YV LSN+YA
Sbjct: 429 EAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
+ G W +VS++RL+M+++ ++K G S +++ +H F V D HP+ I + L E+
Sbjct: 489 SQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISD 548
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
KL+ G+ T VL ++ EE+KE++L YHSEK+A A+G++S G+PIR++KNLR+CED
Sbjct: 549 KLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICED 608
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH++IK ISK+ R I +RD RFHHF GSCSC DYW
Sbjct: 609 CHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 199/455 (43%), Gaps = 103/455 (22%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVR---NKSLSAARNLFEMMPKRDV----VSWNTM 160
LD A ++F+QMPQR+ SWN +I G+ +K+L A +EMM V ++ ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 161 LSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLF-------- 208
L A+ G ++I L+ +E + L+ YV G +++A +LF
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 209 ------ESKANWEVVSWNSLMGGFVKQKRLGD---AKWIFDRMPVRDEVSWNTMITGYAQ 259
K + E+V WN ++ G++ RLGD A+ +FD+M R VSWNTMI+GY+
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYM---RLGDCKAARMLFDKMRQRSVVSWNTMISGYSL 251
Query: 260 NNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVS 311
N + +A +F E D+ T +++ + G ++ + D+ + V
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+A+I Y + ++ A +FE + +NV +W+ MI G+A G
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHG----------------- 354
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
Q+G D++ F +M++ G R + + ++L+ C++ +E G++ Q
Sbjct: 355 -----------QAG---DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+V V + ++ + + M+ R G +A
Sbjct: 401 MVSV------------------------------DGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
E + + IKPDD+ +L AC G VE G
Sbjct: 431 E---EFILNMPIKPDDVIWKALLGACRMQGNVEMG 462
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 145/314 (46%), Gaps = 25/314 (7%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
++V WNVMI GY+R AAR LF+ M +R VVSWNTM+SGY+ NG+ A +F M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 181 ---LEKNEISWNGLLAAYVQNGRIE--EACMLFESKANWEV--VSWNSLMGGFVKQKRLG 233
+ N ++ +L A + G +E E L+ + + V ++L+ + K +
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK--DVFTWTAMVSGY 288
A +F+R+P + ++W+ MI G+A + +A F +A V+ DV + +++
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV-AYINLLTAC 385
Query: 289 VQNGKVDEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVAS 342
G V+E R F M E + M+ ++ +D A E M K +
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445
Query: 343 WNTMITGYAQSGEITHAR---NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
W ++ G + + N+ M HD ++ A+ YA G + + + MK
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 400 YGERLNRSPFTSVL 413
+ + + P S++
Sbjct: 506 --KDIRKDPGCSLI 517
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 165/395 (41%), Gaps = 76/395 (19%)
Query: 69 TTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY------------------LLNGQLDP 110
T+ + + D A +FN MP+R+ S+N +I G+ + + ++P
Sbjct: 67 TSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 111 ARQVF------------------------------DQMPQRDLVSWNVMISGYVRNKSLS 140
R F D+ +LV VM G++++ +
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM-CGFMKDARVL 185
Query: 141 AARNLFE-----MMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
+N+ E M +R ++V WN M+ GY + G AAR +FD+M +++ +SWN +
Sbjct: 186 FYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 192 LAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIF----DRMP 243
++ Y NG ++A +F ++ V+ S++ + L +W+ D
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
D+V + +I Y++ + +A +FE P ++V TW+AM++G+ +G+ +A F
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCK 365
Query: 304 MPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VASWNTMITGYAQSG 354
M + V++ ++ ++ R F M + + + M+ +SG
Sbjct: 366 MRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSG 425
Query: 355 EITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
+ A MP + D + W A++ G E
Sbjct: 426 LLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D +I WNV I +MR G C +A +F+ M +RS VS+N MISGY LNG A +VF +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--------KRDVVSWNTMLSGYAQNGY 169
M + D+ V + + S + L E + + D V + ++ Y++ G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLM-- 223
+ A +F+R+ +N I+W+ ++ + +G+ +A C + ++ V++ +L+
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 224 ---GGFVKQKRLGDAKWI-FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DV 278
GG V++ R ++ + D + R E + M+ ++ L EA+ P+K D
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIE-HYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 279 FTWTAMVSGYVQNGKVDE----ARMIFDAMP 305
W A++ G V+ A ++ D +P
Sbjct: 444 VIWKALLGACRMQGNVEMGKRVANILMDMVP 474
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/650 (38%), Positives = 363/650 (55%), Gaps = 43/650 (6%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
AR +F+ +P D V WNT+L+G + + +A F RM + + A V
Sbjct: 177 ARKVFDAVPSPDTVLWNTLLAGLSGSEALEA----FVRMAGAGSVRPDSTTLASVLPAAA 232
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQ--KRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
E A N+ MG V ++ G A+ E +I+ YA+
Sbjct: 233 EVA---------------NTTMGRCVHAFGEKCGLAQ---------HEHVVTGLISLYAK 268
Query: 260 NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWN 313
+ A+ LF+ D+ T+ A++SGY NG V + +F + P +T+
Sbjct: 269 CGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLV-- 326
Query: 314 AMIAGYVQTKRMDMA----RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
A+I + +A + +A N + T Y + ++ AR FD MP+
Sbjct: 327 ALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEK 386
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
SW A+I+GYAQ+G +E ++ LF +M+ R N +S LS CA L +L LGK +H
Sbjct: 387 TMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVH 446
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
+ E +V AL+ MY KCGS+ EA F+ + +K+V+SWN MI+GY HG G
Sbjct: 447 KIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGA 506
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+AL L++ M + P T + +L ACSH GLV++GT F SM DYG+ P +H TCM
Sbjct: 507 EALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCM 566
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEP-DAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
VDLLGRAG+L EA L+ P WGALLGAC ++ +LA+ A++ +FE+EPEN
Sbjct: 567 VDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPEN 626
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G YVLLSNLY + ++ + + VR + + R + K G + +E+ ++ H F GD HP+
Sbjct: 627 TGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQS 686
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
D IY YLE+L K+ + G+ T+ L+DV EEEKEHM++ HSEKLA+A+G+L+ G
Sbjct: 687 DAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTE 746
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IR++KNLRVC DCHNA K ISK+ RLI++RD +RFHHF G CSCGDYW
Sbjct: 747 IRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 43/384 (11%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY----------------- 319
D F +A+ Y + ++AR +FDA+P +TV WN ++AG
Sbjct: 157 DNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEALEAFVRMAGAGS 216
Query: 320 VQTKRMDMARELFEAMTCKN---------------VASWNTMITG----YAQSGEITHAR 360
V+ +A L A N +A ++TG YA+ G++ AR
Sbjct: 217 VRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECAR 276
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+LFDRM D +++ A+I+GY+ +G S+ LF E+ G R + S +++ +
Sbjct: 277 HLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFG 336
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
L LH +VK G +A V AL +YC+ ++ A AF+ + +K + SWN MI+
Sbjct: 337 HEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMIS 396
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYA++G + A+ LF+ M+ + ++P+ +T+ LSAC+ G + G ++ + + + +
Sbjct: 397 GYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLG-KWVHKIIANEKLE 455
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
N T ++D+ + G + EA+ + +M + +W ++ L+G+ A K +
Sbjct: 456 LNVYVMTALIDMYVKCGSIAEARCIFDSMD-NKNVVSWNVMISGYGLHGQGAEALKLYKD 514
Query: 601 IFE--MEPENAGMYVLLSNLYAAS 622
+ + + P ++ LS LYA S
Sbjct: 515 MMDAHLHPTSS---TFLSVLYACS 535
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 55/290 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ-------------------- 107
I+ + + G + A H+F+ M V+YNA+ISGY +NG
Sbjct: 263 ISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSS 322
Query: 108 -----LDPARQVFDQMPQRDLVSWNVMISG--------------YVRNKSLSAARNLFEM 148
L P F P + +V+ +G Y R + +AR F+
Sbjct: 323 STLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDA 382
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA 204
MP++ + SWN M+SGYAQNG + A +F +M + N ++ + L+A Q G +
Sbjct: 383 MPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLG 442
Query: 205 ----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++ K V +L+ +VK + +A+ IFD M ++ VSWN MI+GY +
Sbjct: 443 KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLH 502
Query: 261 NYLAEAQRLFEEA------PVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
AEA +L+++ P T+ +++ G V E +F +M
Sbjct: 503 GQGAEALKLYKDMMDAHLHPTSS--TFLSVLYACSHGGLVKEGTTVFRSM 550
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 145/374 (38%), Gaps = 118/374 (31%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSA-------------ARNLFEMMPKRDVVSW 157
AR+VFD +P D V WN +++G +++L A + L ++P V+
Sbjct: 177 ARKVFDAVPSPDTVLWNTLLAGLSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVAN 236
Query: 158 NTM-----------------------LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
TM +S YA+ G + AR +FDRM + +++N L++
Sbjct: 237 TTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISG 296
Query: 195 YVQNGRIEEACMLFE----------SKANWEVVSWNSLMGG------------------- 225
Y NG + + LF+ S ++ +S G
Sbjct: 297 YSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDAN 356
Query: 226 ----------FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA-- 273
+ + + A+ FD MP + SWN MI+GYAQN A LF++
Sbjct: 357 APVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQA 416
Query: 274 ------PVK-------------------------------DVFTWTAMVSGYVQNGKVDE 296
P+ +V+ TA++ YV+ G + E
Sbjct: 417 LNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAE 476
Query: 297 ARMIFDAMPEKNTVSWNAMIAGY----VQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
AR IFD+M KN VSWN MI+GY + + + +++ +A +++ +++ +
Sbjct: 477 ARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSH 536
Query: 353 SGEITHARNLFDRM 366
G + +F M
Sbjct: 537 GGLVKEGTTVFRSM 550
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 137/330 (41%), Gaps = 58/330 (17%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
+IS Y G ++ AR +FD+M DLV++N +ISGY N + ++ LF+ +
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319
Query: 150 -------------------PKRDVVSWNTMLSGYAQNGYA--------------DAARRI 176
P + + + +G N D+ARR
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRL 232
FD M EK SWN +++ Y QNG E A LF+ V ++ +S + + L
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439
Query: 233 GDAKWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
KW+ ++ +++ N +I Y + +AEA+ +F+ K+V +W M+SG
Sbjct: 440 SLGKWV-HKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISG 498
Query: 288 YVQNGKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CK 338
Y +G+ EA ++ DA + ++ +++ + +F +MT
Sbjct: 499 YGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITP 558
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQ 368
+ M+ ++G++ A L P+
Sbjct: 559 GIEHCTCMVDLLGRAGQLKEAFELISEFPK 588
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 15/188 (7%)
Query: 410 TSVLSTCA-------NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
TS+ S+C+ + AS L + LH V GF A FV +AL +Y +A
Sbjct: 121 TSLASSCSRGGISPPSAASAAL-RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARK 179
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTG 521
F+ + D + WNT++AG + G +AL F M G ++PD T+ +L A +
Sbjct: 180 VFDAVPSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVA 235
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
G ++ G+ + T ++ L + G ++ A++L M PD T+ AL
Sbjct: 236 NTTMG-RCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRME-GPDLVTYNAL 293
Query: 582 LGACRLYG 589
+ + G
Sbjct: 294 ISGYSING 301
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/639 (36%), Positives = 356/639 (55%), Gaps = 49/639 (7%)
Query: 188 WNGLLAAYVQNGRIE--EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+ L AAY + G ++ E+ + + + +WN+L+ + G A +F +P
Sbjct: 47 FPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSS 106
Query: 246 ---DEVSWNTMITGYAQNNYLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
D ++ +T A+ L A+ R F +DVF +A++ Y + G + +A
Sbjct: 107 ARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAI 166
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG--------- 349
+FD MP K+ V+W+ M+AG+V R A ++ M VA ++ G
Sbjct: 167 RVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTG 226
Query: 350 ------------------------------YAQSGEITHARNLFDRMPQHDCISWAAIIA 379
YA++G AR +F MP + +SW A+I+
Sbjct: 227 NTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALIS 286
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
G+AQ+G+++++L LF EM G + + S L CA++ L+LGK +HG +++ E
Sbjct: 287 GFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILR-RLEF 345
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
C +G A+L MY KCGS+E A F ++ +D++ WN MIA HG G DAL LF+ +
Sbjct: 346 QCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELN 405
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
GIKPD T +LSA SH+GLVE+G +F M ++G+ P KH C+VDLL R+G +
Sbjct: 406 ETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLV 465
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
+EA ++ +M EP W ALL C K EL E A+ I E +PE+ G+ L+SNLY
Sbjct: 466 EEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLY 525
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
AA+ +W V ++R M+D G KKV GYS +EV H F + D HP+ I + +L
Sbjct: 526 AAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLS 585
Query: 680 FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCE 739
F++++ G+V T+ V HD+ E+ KE +L YHSE+LA+A+G+L+ G + ++KNLRVC
Sbjct: 586 FEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCG 645
Query: 740 DCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+AIK+ISKIV R I++RD RFHHF G+CSCGDYW
Sbjct: 646 DCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 190/453 (41%), Gaps = 71/453 (15%)
Query: 47 SKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMP---RRSSVSYNAMISGYL 103
++S P+ I WN + R G +AL VF ++P R S ++ ++
Sbjct: 63 AESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSSARPDSTTFTLALTACA 122
Query: 104 LNGQLDPARQV----FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
G LD A V F RD+ + ++ Y R ++ A +F+ MP++D V+W+T
Sbjct: 123 RLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWST 182
Query: 160 MLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML----FESK 211
M++G+ G A ++ RM E ++E+ G++ A G +
Sbjct: 183 MVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHG 242
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+VV SL+ + K A+ +F MP R+ VSWN +I+G+AQN + EA LF
Sbjct: 243 MRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFR 302
Query: 272 EAPVKDV--------------------------------------FTWTAMVSGYVQNGK 293
E + TA++ Y + G
Sbjct: 303 EMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCILGTAVLDMYSKCGS 362
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGY----VQTKRMDMARELFEAMTCKNVASWNTMITG 349
++ AR +F+ + ++ V WNAMIA + + +EL E + A++ ++++
Sbjct: 363 LESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSA 422
Query: 350 YAQSGEITHARNLFDRM--------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+ SG + + FDRM + C+ ++ A+SG E++ + M
Sbjct: 423 LSHSGLVEEGKFWFDRMITEFGIEPTEKHCV---CVVDLLARSGLVEEANEMLASMH--- 476
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+ ++LS C N LELG+ + ++++
Sbjct: 477 TEPTIPIWVALLSGCLNNKKLELGETIAKKILE 509
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 163/374 (43%), Gaps = 70/374 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + R G A+ VF+ MPR+ V+++ M++G++ G+ A ++ +M
Sbjct: 145 DVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMR 204
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
+ D+V ++ Y +N
Sbjct: 205 EHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFD 264
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA------ 194
AR +F MMP R+ VSWN ++SG+AQNG+AD A +F M +G L +
Sbjct: 265 VARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACA 324
Query: 195 ---YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
+++ G+ +L + ++ + +++ + K L A+ +F+++ RD V WN
Sbjct: 325 DVGFLKLGKSIHGFIL--RRLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWN 382
Query: 252 TMI----TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM--- 304
MI T ++ LA Q L E D T+ +++S +G V+E + FD M
Sbjct: 383 AMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITE 442
Query: 305 -----PEKNTVSWNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEI-- 356
EK+ V ++A ++ ++ A E+ +M T + W +++G + ++
Sbjct: 443 FGIEPTEKHCVCVVDLLA---RSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLEL 499
Query: 357 --THARNLFDRMPQ 368
T A+ + + P+
Sbjct: 500 GETIAKKILESQPE 513
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 148/328 (45%), Gaps = 33/328 (10%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL-VSW 126
+ + +NG D A VF MP R++VS+NA+ISG+ NG D A +F +M L
Sbjct: 254 VDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDS 313
Query: 127 NVMISGYVRNKS---LSAARNLFEMMPKR---DVVSWNTMLSGYAQNGYADAARRIFDRM 180
++S + L +++ + +R + +L Y++ G ++AR++F+++
Sbjct: 314 GALVSALLACADVGFLKLGKSIHGFILRRLEFQCILGTAVLDMYSKCGSLESARKLFNKL 373
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAK 236
++ + WN ++A +G +A LF E+ + ++ SL+ + + K
Sbjct: 374 SSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 433
Query: 237 WIFDRMPVR-----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF-TWTAMVSGYVQ 290
+ FDRM E ++ A++ + EA + + W A++SG +
Sbjct: 434 FWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLN 493
Query: 291 NGKVDE----ARMIFDAMPEKNTVSWNAMIAG-YVQTKRMDMARELFEAMTCKNVASWNT 345
N K++ A+ I ++ PE + A+++ Y K+ D RE+ + M S +
Sbjct: 494 NKKLELGETIAKKILESQPED--IGVLALVSNLYAAAKKWDKVREIRKLMK----DSGSK 547
Query: 346 MITGYAQSGEITHARNLF----DRMPQH 369
+ GY+ E+ R+ F PQH
Sbjct: 548 KVPGYSLI-EVHGTRHAFVMEDQSHPQH 574
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/469 (47%), Positives = 304/469 (64%), Gaps = 4/469 (0%)
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
++I YV+ + AR+LF+ M +++ASWN +I GY + GEI A +LF+RM + +S
Sbjct: 147 SLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS 206
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERL--NRSPFTSVLSTCANLASLELGKQLHGQ 431
W A+I+GY Q+G++E +L LF EM + G + N SVL CA A+LE G+++H
Sbjct: 207 WTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF 266
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD--KDVISWNTMIAGYARHGFGK 489
+G V AL MY KC S+ EA F+ I K++I+WNTMI YA HG G
Sbjct: 267 ANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGV 326
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+A+ +FE+M G++PD +T +G+LS CSH+GL++ G +F M + V P +HY C+
Sbjct: 327 EAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACV 386
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
VDLLGRAGRL EA+ L+ MP + + WGALL ACR + E+AE AA +F +EP+N+
Sbjct: 387 VDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNS 446
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
G YVLLSNLYA +G W +V K+R ++ +G+KK G SW+E+ K H F D HP+
Sbjct: 447 GNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAK 506
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
IY +LE L K+K G++ T VLHD+ EEEKE+ L HSEKLA+A+G+L+ G +
Sbjct: 507 EIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVL 566
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RV KNLR+C DCH A K ISKI R II+RD NRFH F GSCSCGDYW
Sbjct: 567 RVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 171/342 (50%), Gaps = 31/342 (9%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
++I Y+ G + AR++FD+M RD+ SWN +I+GY++ + A +LFE M R++VS
Sbjct: 147 SLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS 206
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLE------KNEISWNGLLAAYVQNGRIEEACMLFES 210
W M+SGY QNG+A+ A +FD ML+ N ++ +L A Q+ +E + +
Sbjct: 207 WTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF 266
Query: 211 KANWEVVSWNS-----LMGGFVKQKRLGDAKWIFDRMPV--RDEVSWNTMITGYAQNNYL 263
AN + NS L G + K L +A+ FD + ++ ++WNTMIT YA +
Sbjct: 267 -ANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCG 325
Query: 264 AEAQRLFE---EAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNA 314
EA +FE A V+ D T+ ++SG +G +D F+ M ++V +
Sbjct: 326 VEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYAC 385
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYA--QSGEITH--ARNLFDRMPQH 369
++ + R+ A+EL M + S W ++ ++ EI AR LF P +
Sbjct: 386 VVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDN 445
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
++ + YA++G E+ +L +K G + +SP S
Sbjct: 446 SG-NYVLLSNLYAEAGMWEEVKKLRALLKYQG--MKKSPGCS 484
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 63/315 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN I +M+ G A +F M R+ VS+ AMISGY NG + A +FD+M
Sbjct: 172 DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEML 231
Query: 120 QRDL---VSWNVMIS--------------------------------------GYVRNKS 138
Q +W ++S Y + S
Sbjct: 232 QDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYS 291
Query: 139 LSAARNLFEMMPK--RDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLL 192
L AR F+M+ + +++++WNTM++ YA +G A IF+ ML + + +++ GLL
Sbjct: 292 LVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLL 351
Query: 193 AAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+ +G I+ F V + ++ + RL +AK + +MP++
Sbjct: 352 SGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAG 411
Query: 248 VS-WNTMITGYA--QNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI-- 300
S W ++ +N +AE A+RLF P + + + + Y + G +E + +
Sbjct: 412 PSVWGALLAACRSHRNLEIAELAARRLFVLEP-DNSGNYVLLSNLYAEAGMWEEVKKLRA 470
Query: 301 ---FDAMPEKNTVSW 312
+ M + SW
Sbjct: 471 LLKYQGMKKSPGCSW 485
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/692 (35%), Positives = 374/692 (54%), Gaps = 73/692 (10%)
Query: 150 PKRDVVSWNTMLSGYAQNG--YADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEE 203
P V S + Y NG + + + I R+L +++ N +L + G
Sbjct: 7 PSSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNY 66
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ ++F + WN+++ G V + DA ++ M G+ NN+
Sbjct: 67 SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRG----------GGFLPNNFT 116
Query: 264 ------AEAQRLFEEAPVK------------DVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
A A++L +K DVF T+++S YV+ D+A +FD +P
Sbjct: 117 IPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP 176
Query: 306 EKNTVSWNAMIAGYVQT-----------KRMDMA-------------------------- 328
+KN VSW A+I GY+ + K ++M
Sbjct: 177 DKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEW 236
Query: 329 --RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
R + ++ +NV +++ Y + G + A +F MP+ D +SW+ +I GYA +G
Sbjct: 237 IDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGL 296
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+ +L LF +M+ + + VLS CA L +L+LG + + F + +G A
Sbjct: 297 PQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA 356
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCGSV +A+ F + KD + WN M+ G + +G K LF ++ GI+PD
Sbjct: 357 LIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPD 416
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+ T +G+L C+H G V +G ++F +M R + + P+ +HY CMVDLLGRAG L+EA L+
Sbjct: 417 ENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
NMP +P+A WGALLG C+L+ T LAE+ + + E+EP N+G YV LSN+Y+ + RW
Sbjct: 477 NNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWE 536
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+ K+R M+++ ++K+ SW+E+ VH F VGD H ++IYA L+EL +LK G
Sbjct: 537 EAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
V +T+ VL D+ EEEKEH L YHSEKLAVA+G+++ P IRV+KNLRVC DCH+AIK
Sbjct: 597 HVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIK 656
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKI R II+RD NRFH F GSCSC DYW
Sbjct: 657 LISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 155/368 (42%), Gaps = 28/368 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
+I WN I + C D A+H++ SM P ++ + L+ +L
Sbjct: 78 NIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIH 137
Query: 114 --VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ D+ ++S YV+ + A +F+ +P ++VVSW +++GY +G+
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFR 197
Query: 172 AARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLM 223
A F ++LE + S +LAA + G + +S V SL+
Sbjct: 198 EAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLL 257
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVF 279
+VK L A IF MP +D VSW+TMI GYA N +A LF E D +
Sbjct: 258 DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCY 317
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAM 335
T ++S G +D M N V A+I Y + + A E+F AM
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSL 391
K+ WN M+ G + +G +LF + +H D ++ ++ G G+ +
Sbjct: 378 KKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGR 437
Query: 392 RLFIEMKR 399
+ F MKR
Sbjct: 438 QFFNNMKR 445
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 167/402 (41%), Gaps = 81/402 (20%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ ++ +++ D AL VF+ +P ++ VS+ A+I+GY+ +G A
Sbjct: 142 KAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIG 201
Query: 114 VFDQMPQ---------------------------------------RDLVSWNVMISGYV 134
F ++ + R++ ++ YV
Sbjct: 202 AFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYV 261
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
+ +L A +F MP++D+VSW+TM+ GYA NG A +F +M L+ + + G
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 191 LLAAYVQNGRIE----EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+L+A G ++ + ++ ++ V +L+ + K + A IF M +D
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKD 381
Query: 247 EVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFD 302
V WN M+ G + N + LF E+ ++ D T+ ++ G G V+E R F+
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
M +++ ++ + M+ ++G + A L
Sbjct: 442 NMKRVFSLT--------------------------PSIEHYGCMVDLLGRAGLLNEAHQL 475
Query: 363 FDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMKRY 400
+ MP + + + W A++ G + + +E L+ IE++ +
Sbjct: 476 INNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPW 517
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/526 (41%), Positives = 321/526 (61%), Gaps = 41/526 (7%)
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQ----TKRMDMARELFEAMTCK----------- 338
+D + +FD MP ++ VSWN +IAG+ Q + +DM RE+ + K
Sbjct: 176 IDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILP 235
Query: 339 -------------------------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+V +++I YA+ + + F +P+ D IS
Sbjct: 236 IFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAIS 295
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +IIAG Q+G + L F M + + F+SV+ CA+L +L LG+QLHG +V
Sbjct: 296 WNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIV 355
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
++GF+ F+ ++L+ MY KCG+++ A + F+ I +D+++W +I G A HG DA+
Sbjct: 356 RLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVS 415
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LFE+M G++P + + +L+ACSH GLV++G YF SM RD+G+ P +HY + DLL
Sbjct: 416 LFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLL 475
Query: 554 GRAGRLDEAQNLMKNM-PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
GRAGRL+EA + + NM +P + W LL ACR + ELAEK + + ++ EN G Y
Sbjct: 476 GRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAY 535
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VL+SN+Y+A+ RW D +++R+ MR +G+KK SW+EV N+VHTF GD HP D+I
Sbjct: 536 VLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKIN 595
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
L+ L +++++G+V T VLHDV EE K +L HSE+LA+AYGI+S AG IRV+
Sbjct: 596 KALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVI 655
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KN+RVC DCH AIK I+KIVGR I +RDN+RFHHF GSCSCGDYW
Sbjct: 656 KNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 171/384 (44%), Gaps = 65/384 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA+I+ Y + A +VFD P+R + + +F+MMP RDVV
Sbjct: 149 NALINTY---AKFHNAGKVFDVFPKRG-------------ESGIDCVKKVFDMMPVRDVV 192
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEACML--- 207
SWNT+++G+AQNG A + M L+ + + + +L + ++ + + +
Sbjct: 193 SWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGY 252
Query: 208 -FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ + +V +SL+ + K RL + F +P +D +SWN++I
Sbjct: 253 AVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSII------------ 300
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQT 322
+G VQNG+ D F M ++N VS++++I
Sbjct: 301 -------------------AGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHL 341
Query: 323 KRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ + R+L + N ++++ YA+ G I AR +FDR+ + D ++W AII
Sbjct: 342 TALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAII 401
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGF 437
G A G++ D++ LF M G R F +VL+ C++ ++ G + + + G
Sbjct: 402 MGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGI 461
Query: 438 EAGCFVGNALLVMYCKCGSVEEAY 461
G A+ + + G +EEAY
Sbjct: 462 APGLEHYAAVADLLGRAGRLEEAY 485
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 206/505 (40%), Gaps = 99/505 (19%)
Query: 12 SSCILHQHTQSINRLQS---PANTNPYPS----KKTLKRHLNSKSRN--KPKPAGDWDIR 62
S +LH S N ++S P N + +PS LK H + S + + D D+
Sbjct: 87 SHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLY 146
Query: 63 QWNVAITTHMR---------------NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ 107
N I T+ + D VF+ MP R VS+N +I+G+ NG
Sbjct: 147 IANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGM 206
Query: 108 LDPARQVFDQMPQR----------------------------------------DLVSWN 127
A + +M + D+ +
Sbjct: 207 YVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGS 266
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN--- 184
+I Y + L + F ++P++D +SWN++++G QNG D F RML++N
Sbjct: 267 SLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKP 326
Query: 185 -EISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+S++ ++ A + GR C++ + E ++ +SL+ + K + A+++
Sbjct: 327 MAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIA-SSLVDMYAKCGNIKMARYV 385
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---EAPVKDVFT-WTAMVSGYVQNGKV 294
FDR+ RD V+W +I G A + + +A LFE E V+ + + A+++ G V
Sbjct: 386 FDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLV 445
Query: 295 DEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM--TCKNVASWNTMI 347
DE F++M ++ + A+ + R++ A + M + W+ ++
Sbjct: 446 DEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILL 505
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAG---YAQSGYSEDSLRLFIEMKRYGERL 404
+ A + D++ D + A + Y+ + +D+ RL I M++ G L
Sbjct: 506 AACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKG--L 563
Query: 405 NRSPFTSVLSTCANLASLELGKQLH 429
++P S +E+G Q+H
Sbjct: 564 KKTPACS---------WIEVGNQVH 579
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+W++II Y S F M+ NR F S+L L +L LH
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF----EEIVD-----------KDVISWNT 477
V++G ++ ++ NAL+ Y K + + + F E +D +DV+SWNT
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 478 MIAGYARHGFGKDAL-MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE---YFYSM 533
+IAG+A++G +AL M+ E K +KPD T+ IL + V KG E Y
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
D V S ++D+ + RL+ + +P DA +W +++ C
Sbjct: 257 GFDGDVFIGSS----LIDMYAKCNRLECSLRAFYILP-RKDAISWNSIIAGC 303
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/536 (41%), Positives = 331/536 (61%), Gaps = 11/536 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------ 304
N++IT Y + + ++++F+E P K+ +W+A++ +Q+ + E +F M
Sbjct: 49 NSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSR 108
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
P + + NAM + D+ R + E + + + +A+ G + AR LFD
Sbjct: 109 PSRGAI-LNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFD 167
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+ D ++WA I Y ++ ++L L +M G + V+ C+ LAS +L
Sbjct: 168 GIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQL 227
Query: 425 GKQLHGQLVKVGFEAGCF--VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+HG ++ GF V AL+ +Y KCGS+ A F+ + ++++I+W+ MI+GY
Sbjct: 228 AHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGY 286
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
HG+G++AL LF+ MK +KPD IT V ILSACSH+GLV +G E F SM RD+GV P
Sbjct: 287 GMHGWGREALNLFDQMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPR 345
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVD+LGRAG+LDEA + ++ MP P+AA WGALLGACR++ +LAE A +F
Sbjct: 346 PEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALF 405
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+++P NAG YV+L N+Y +G+ + +R M++RGVKK+ GYS +E++NK++ F GD
Sbjct: 406 DLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGD 465
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP+ D IY+ LE L +++Q+G+ VLHDV EE KE ML HSEKLA+ +G+L+
Sbjct: 466 RSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLN 525
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ G IR+ KNLRVC DCH A K ISK+ GR I++RD +RFHHF G+CSC DYW
Sbjct: 526 LGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 158/363 (43%), Gaps = 65/363 (17%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
N++I+ Y + + +RQVFD+MP ++ VSW+ +I +++ +LF M
Sbjct: 49 NSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSR 108
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
P R + N M + D R + + L+ ++ + + + GR+E A LF+
Sbjct: 109 PSRGAI-LNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFD 167
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMI----------- 254
+ ++V+W + + +VK +A + +M ++ D ++ +I
Sbjct: 168 GIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQL 227
Query: 255 ---------TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
TG+ N LA TA++ YV+ G + AR +FD M
Sbjct: 228 AHIVHGIITTGFFYNQLLA---------------VETALIDLYVKCGSLTYARKVFDGMQ 272
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK---NVASWNTMITGYAQSGEITHARNL 362
E+N ++W+AMI+GY A LF+ M + ++ ++++ + SG +
Sbjct: 273 ERNIITWSAMISGYGMHGWGREALNLFDQMKASVKPDHITFVSILSACSHSGLVAEGWEC 332
Query: 363 FDRM---------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
F+ M P+H +A ++ ++G +++ FIE R R N + + ++L
Sbjct: 333 FNSMARDFGVTPRPEH----YACMVDILGRAGKLDEACD-FIE--RMPVRPNAAVWGALL 385
Query: 414 STC 416
C
Sbjct: 386 GAC 388
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M R G + + F ++ C+ L E G ++H +VK G+++ F+ N+L+ MY KC
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
E + F+E+ DK+ +SW+ +I + K+ LF M + G +P ++ + A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-A 119
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C + + + Y + + G+ + + + R GR++ A+ L + D
Sbjct: 120 CVRS---HEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGI-MSKDLV 175
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEM 604
TW + A Y K ++ +A ++ +M
Sbjct: 176 TWATTIEA---YVKADMPLEALGLLKQM 200
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 172/420 (40%), Gaps = 68/420 (16%)
Query: 75 GCCDS---ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQRDLVS 125
G CD + VF+ MP +++VS++A+I L + + +F QM P R +
Sbjct: 56 GKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAI- 114
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
N M ++ R + E D + +A+ G + AR++FD ++ K+
Sbjct: 115 LNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDL 174
Query: 186 ISWNGLLAAYVQNGRIEEACMLFES-----------------KANWEVVSW--------- 219
++W + AYV+ EA L + +A + S+
Sbjct: 175 VTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI 234
Query: 220 --------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+L+ +VK L A+ +FD M R+ ++W+ MI+GY + + E
Sbjct: 235 ITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGRE 294
Query: 266 AQRLFEE--APVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIA 317
A LF++ A VK D T+ +++S +G V E F++M V+ + M+
Sbjct: 295 ALNLFDQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVD 354
Query: 318 GYVQTKRMDMARELFEAMTCK-NVASWNTMITGY-----AQSGEITHARNLFDRMPQHDC 371
+ ++D A + E M + N A W ++ E+ AR LFD P H+
Sbjct: 355 ILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMV-ARALFDLDP-HNA 412
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ + Y +G +++ + MK G + + SV+ L + G + H Q
Sbjct: 413 GRYVILYNIYTLTGKRKEADSIRTLMKNRG--VKKIAGYSVIEIKNKLYAFVAGDRSHPQ 470
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP---QRDLV 124
I +++ G A VF+ M R+ ++++AMISGY ++G A +FDQM + D +
Sbjct: 252 IDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMKASVKPDHI 311
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVS-----WNTMLSGYAQNGYADAARRIFDR 179
++ ++S + ++ F M + V+ + M+ + G D A +R
Sbjct: 312 TFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIER 371
Query: 180 M-LEKNEISWNGLLAA 194
M + N W LL A
Sbjct: 372 MPVRPNAAVWGALLGA 387
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/691 (33%), Positives = 399/691 (57%), Gaps = 34/691 (4%)
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ L S N +++ YV++ ++ AR LF+ +P+R+ +W ++SG+++ G ++ ++F M
Sbjct: 322 QTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREM 381
Query: 181 LEK----NEISWNGL-----LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
K N+ + + L L +Q G+ A ML + + +VV NS++ ++K K
Sbjct: 382 RAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWML-RNGIDADVVLGNSILDLYLKCKV 440
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
A+ +F+ M D VSWN MI+ Y + + ++ +F P KDV +W +V G +Q
Sbjct: 441 FEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQF 500
Query: 292 G----KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASW 343
G +++ + + E + V+++ + +++ R+L + C++
Sbjct: 501 GYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIR 560
Query: 344 NTMITGYAQSGEITHARNLFDRMP----------------QHDCISWAAIIAGYAQSGYS 387
++++ Y + G + +A + +P + +SW +++GY +G
Sbjct: 561 SSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKY 620
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
ED L+ F M R ++ T+++S CAN LE G+ +H K+G +VG++L
Sbjct: 621 EDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSL 680
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY K GS+++A+ F + + +++ W +MI+G A HG GK A+ LFE M GI P++
Sbjct: 681 IDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNE 740
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T +G+L+AC H GL+E+G YF M Y + P +H T MVDL GRAG L E +N +
Sbjct: 741 VTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIF 800
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
+ W + L +CRL+ E+ + +E++ ++ P + G YVLLSN+ A++ RW +
Sbjct: 801 ENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDE 860
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
++VR M RG+KK G SW+++++++HTF +GD HP+ + IY+YL+ L +LK+ G+
Sbjct: 861 AARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGY 920
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
+ KLV+ DV EE+ E ++ +HSEKLAV +GI++ PIR++KNLR+C DCHN IK+
Sbjct: 921 SFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKY 980
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S+++ R IILRD +RFHHF G CSCGDYW
Sbjct: 981 ASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 190/463 (41%), Gaps = 82/463 (17%)
Query: 45 LNSKSRNKPKPAGDW-----------DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV 93
+S N P P G + N +T ++++ D A +F+ +P+R++
Sbjct: 297 FHSTISNGPPPLGTLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQ 356
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQR-------------------------------- 121
++ +ISG+ G + ++F +M +
Sbjct: 357 TWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWM 416
Query: 122 -------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
D+V N ++ Y++ K A +FE+M + DVVSWN M+S Y + G + +
Sbjct: 417 LRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSL 476
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNG----RIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
+F R+ K+ +SWN ++ +Q G +E+ + E + VV+++ +
Sbjct: 477 DMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLS 536
Query: 231 RLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---------- 276
+ + + + RD ++++ Y + + A + ++ P+
Sbjct: 537 LVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVT 596
Query: 277 ------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV----SWNAMIAGYVQTKRMD 326
+ +W MVSGYV NGK ++ F M + V + +I+ ++
Sbjct: 597 CKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILE 656
Query: 327 MAREL--FEAMTCKNVASW--NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
R + + + ++ +++I Y++SG + A +F + + + + W ++I+G A
Sbjct: 657 FGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCA 716
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
G + ++ LF EM G N F VL+ C + LE G
Sbjct: 717 LHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEG 759
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 50/423 (11%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + +++ + A VF M VS+N MIS YL G ++ + +F +
Sbjct: 422 DADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRR 481
Query: 118 MPQRDLVSWNVMISGYVR----NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+P +D+VSWN ++ G ++ ++L + E + VV+++ L + +
Sbjct: 482 LPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELG 541
Query: 174 RRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLF------------------ESK 211
R++ +L+ ++ + L+ Y + GR++ A ++ E K
Sbjct: 542 RQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELK 601
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN----TMITGYAQNNYLAEAQ 267
A +VSW ++ G+V + D F R+ VR+ V + T I N + E
Sbjct: 602 AG--IVSWGLMVSGYVWNGKYEDGLKTF-RLMVRELVVVDIRTVTTIISACANAGILEFG 658
Query: 268 RLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
R K D + ++++ Y ++G +D+A IF E N V W +MI+G
Sbjct: 659 RHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALH 718
Query: 323 KRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS----- 373
+ A LFE M N ++ ++ +G + F M CI+
Sbjct: 719 GQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEH 778
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
+++ Y ++G+ ++ E G S + S LS+C ++E+GK + L+
Sbjct: 779 CTSMVDLYGRAGHLTETKNFIFE---NGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLL 835
Query: 434 KVG 436
+V
Sbjct: 836 QVA 838
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
LH VK G N LL +Y K +++ A F+EI ++ +W +I+G++R G
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
+ LF M+ G P+ T+ + CS ++ G M R+ G+ +
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRN-GIDADVVLGN 429
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
++DL + + A+ + + M E D +W ++ A G E
Sbjct: 430 SILDLYLKCKVFEYAERVFELMN-EGDVVSWNIMISAYLRAGDVE 473
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/745 (33%), Positives = 396/745 (53%), Gaps = 95/745 (12%)
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML-- 181
+ N MI G LS AR+LF+ +P + +N ++ Y+ G A A R
Sbjct: 69 IDHNRMICG-----DLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRR 123
Query: 182 --EKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+ N ++ +L A + A C + + ++ +L+ + K A
Sbjct: 124 LPQPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHA 183
Query: 236 KWIFDRMPVRDEVSWNTMITGYA---------------QNNYLAEAQRLFEEAPV----- 275
+F RMP RD V+WN M+ GYA Q+++ A L P+
Sbjct: 184 ATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHG 243
Query: 276 ---------------------KD-VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
KD V TA++ Y + G + A +F+AM +N V+W+
Sbjct: 244 ALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWS 303
Query: 314 AMIAGYVQTKRMDMARELFEAM------------------TCKNVA-------------- 341
A++ G+V RM A LF+ M C N++
Sbjct: 304 ALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAK 363
Query: 342 --------SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ N++++ YA++G I A LFD+M D +S++A+++GY Q+G ++++ R+
Sbjct: 364 SGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRV 423
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F +M+ + + + S++ C++LA+L+ GK HG ++ G + + NAL+ MY K
Sbjct: 424 FRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAK 483
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG ++ + F+ + +D++SWNTMIAGY HG GK+A LF MK +PDD+T + +
Sbjct: 484 CGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICL 543
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
+SACSH+GLV +G +F+ M YG+ P +HY MVDLL R G LDEA ++ MP +
Sbjct: 544 ISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKA 603
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
D WGALLGACR++ +L ++ + +I ++ PE G +VLLSN+++A+GR+ + ++VR+
Sbjct: 604 DVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRI 663
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
+++G KK G SW+E+ +H F GD H + IY L+ + + + G+ T
Sbjct: 664 IQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSF 723
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
VL DV EEEKE L YHSEKLA+A+G+L++ + I V KNLRVC DCH IK+++ +
Sbjct: 724 VLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRK 783
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD NRFHHF G CSCGD+W
Sbjct: 784 RAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 215/550 (39%), Gaps = 137/550 (24%)
Query: 71 HMRNGCCDSAL--HVFNSMPRRSSVSYNAMISGYLLNGQ--------------------- 107
H R C D +L H+F+ +P YNA+I Y L G
Sbjct: 71 HNRMICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNY 130
Query: 108 -----LDPARQVFDQMPQR-------------DLVSWNVMISGYVRNKSLSAARNLFEMM 149
L + D R DL ++ Y + S A +F M
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM 190
Query: 150 PKRDVVSWNTMLSGYAQNG-YAD--AARRIFDRMLEKNEISWNGLLAAYVQNGRIEE--- 203
P RDVV+WN ML+GYA +G Y+D A + N + LL Q+G + +
Sbjct: 191 PARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRA 250
Query: 204 -------ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
AC L + K V+ +L+ + K L A +F+ M VR+EV+W+ ++ G
Sbjct: 251 VHAYSVRACSLHDHKDG--VLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGG 308
Query: 257 YAQNNYLAEAQRLFEE---------APVK------------------------------- 276
+ + EA LF++ +P
Sbjct: 309 FVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHT 368
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
D+ +++S Y + G +D+A +FD M K+TVS++A+++GYVQ + D A +F M
Sbjct: 369 DLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQ 428
Query: 336 ----------------TCKNVASW----------------------NTMITGYAQSGEIT 357
C ++A+ N +I YA+ G I
Sbjct: 429 ACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRID 488
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+R +FD MP D +SW +IAGY G +++ LF++MK + F ++S C+
Sbjct: 489 LSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACS 548
Query: 418 NLASLELGKQ-LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISW 475
+ + GK+ H K G ++ + + G ++EAY + + + DV W
Sbjct: 549 HSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVW 608
Query: 476 NTMIAGYARH 485
++ H
Sbjct: 609 GALLGACRVH 618
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 197/496 (39%), Gaps = 136/496 (27%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
A++ Y A VF +MP RD+V+WN M++GY + S +M
Sbjct: 168 TALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAP 227
Query: 156 SWNTMLS-------------GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
+ +T+++ G A + Y+ A + D + + LL Y + G +
Sbjct: 228 NASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDH--KDGVLVGTALLDMYAKCGHLV 285
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----------------- 245
A +FE+ A V+W++L+GGFV R+ +A +F M +
Sbjct: 286 YASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRAC 345
Query: 246 -----------------------DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
D + N++++ YA+ + +A LF++ VKD +++
Sbjct: 346 ANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYS 405
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKN---------------------------------- 308
A+VSGYVQNGK DEA +F M N
Sbjct: 406 ALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVR 465
Query: 309 -----TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
T NA+I Y + R+D++R++F+ M +++ SWNTMI GY G A LF
Sbjct: 466 GIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALF 525
Query: 364 DRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMK-RYG------------ERLNR 406
M C +++ +I+ + SG + R F M +YG + L R
Sbjct: 526 LDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLAR 585
Query: 407 SPFT--------------------SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
F ++L C +++LGKQ+ + ++G E GN
Sbjct: 586 GGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEG---TGNF 642
Query: 447 LLV--MYCKCGSVEEA 460
+L+ ++ G +EA
Sbjct: 643 VLLSNIFSAAGRFDEA 658
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 177/436 (40%), Gaps = 64/436 (14%)
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-- 304
++ N MI G L+ A+ LF++ P + + A++ Y G R+
Sbjct: 68 QIDHNRMICGD-----LSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRR 122
Query: 305 --PEKNTVSWNAMIAGYVQTKRMDMARELF----EAMTCKNVASWNTMITGYAQSGEITH 358
P+ N ++ ++ + AR + A ++ ++ YA+ H
Sbjct: 123 RLPQPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRH 182
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
A +F RMP D ++W A++AGYA G D++ + M+ N S ++L A
Sbjct: 183 AATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQ 241
Query: 419 LASLELGKQLHGQLVKV----GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
+L G+ +H V+ + G VG ALL MY KCG + A FE + ++ ++
Sbjct: 242 HGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT 301
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG-ILSACS--------------- 518
W+ ++ G+ G +A LF+ M G+ T V L AC+
Sbjct: 302 WSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALL 361
Query: 519 -----HT---------------GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
HT GL+++ T F M V+ ++ Y+ +V + G+
Sbjct: 362 AKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM-----VVKDTVSYSALVSGYVQNGK 416
Query: 559 LDEAQNLMKNMP---FEPDAATWGALLGACRLYGKTELAEKA-AEVIFEMEPENAGMYVL 614
DEA + + M +PD AT +L+ AC + + VI +
Sbjct: 417 ADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNA 476
Query: 615 LSNLYAASGRWGDVSK 630
L ++YA GR D+S+
Sbjct: 477 LIDMYAKCGRI-DLSR 491
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 70/285 (24%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N ++ + + G D A +F+ M + +VSY+A++SGY+ NG+ D A +VF +M
Sbjct: 369 DLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQ 428
Query: 120 ----QRDLVSW-----------------------------------NVMISGYVRNKSLS 140
Q D+ + N +I Y + +
Sbjct: 429 ACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRID 488
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
+R +F++MP RD+VSWNTM++GY +G A +F M E +++++ L++A
Sbjct: 489 LSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACS 548
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+G + E W +M + G I RM + M+
Sbjct: 549 HSGLVTEG------------KRWFHMMA-----HKYG----ITPRME-----HYIGMVDL 582
Query: 257 YAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMI 300
A+ +L EA + + P+K DV W A++ + +D + +
Sbjct: 583 LARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQV 627
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/676 (36%), Positives = 379/676 (56%), Gaps = 57/676 (8%)
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
N L Y++ AARR+FD + N S+N L++AY + +E A LF+ + V
Sbjct: 47 NHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSV 106
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEA 273
S+N+L+ + ++ A +F M D + + +IT N L
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVV 166
Query: 274 PVKD--VFTWTAMVSGYVQNGKVDEARMIFDAMPE-KNTVSWNAMIAGYVQTKRMDMARE 330
D V A+++ Y +NG + EAR IF + E ++ VSWN+M+ Y+Q + A E
Sbjct: 167 TGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALE 226
Query: 331 LFEAMTCK-------NVASWNTMIT------------------GYAQS------------ 353
L+ MT + +AS T T GY Q+
Sbjct: 227 LYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYS 286
Query: 354 ---GEITHARNLFDRMPQHDCISWAAIIAGYA-QSGYSEDSLRLFIEMKRYGERLNRSPF 409
G + R +FD + D + W +I+GY+ S+++L F +++ G R +
Sbjct: 287 KCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSL 346
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIV 468
V+S C+N++S G+Q+HG +K+ + V NAL+ MY KCG++ +A F+ +
Sbjct: 347 VCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ + +S+N+MIAGYA+HG G +L LF+ M + P +IT + +L+AC+HTG VE G
Sbjct: 407 EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKI 466
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF M + +G+ P + H++CM+DLLGRAG+L EA+ L++ +PF+P W ALLGACR++
Sbjct: 467 YFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIH 526
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
G ELA KAA + +++P NA YV+L+N+Y+ +GR D + VR MRDRGVKK G SW
Sbjct: 527 GNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSW 586
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG------EEE 702
+EV ++H F DT HP +I YLEE+ K+K+ G Y+ ++ VG + E
Sbjct: 587 IEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVG--YTPEVRSASVGGDDRVWQRE 644
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
+E L +HSEKLAV++G++S G PI V KNLR+C DCHNAIK+IS++V R I +RD++
Sbjct: 645 EELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSH 704
Query: 763 RFHHFSGGSCSCGDYW 778
RFH F G CSCG YW
Sbjct: 705 RFHCFKDGQCSCGGYW 720
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 232/521 (44%), Gaps = 99/521 (19%)
Query: 61 IRQWNVAITTH--MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
RQ+ H +R G AL++ + +P + +S N + Y +L AR+VFD
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLS-NHFLLLYSKCRRLSAARRVFDHT 69
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
++ S+N +IS Y + + A LF+ MP+ D VS+NT+++ YA+ G A ++F
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 179 RM----LEKNEISWNGLLAAY-VQNGRIEEACML-FESKANWEVVSWNSLMGGFVKQKRL 232
M L+ + + +G++ A + G I + L + + V N+L+ + K L
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFL 189
Query: 233 GDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMV-- 285
+A+ IF + RDEVSWN+M+ Y Q+ ++A L+ E V+ D+FT +++
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249
Query: 286 -------------------SGYVQN-----GKVD----------EARMIFDAMPEKNTVS 311
SGY QN G +D + R +FD + + V
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309
Query: 312 WNAMIAGYVQTKRM-DMARELFEAM-----------------TCKNVASW---------- 343
WN MI+GY + + D A E F + C N++S
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369
Query: 344 -------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
N +I Y++ G + A+ LFD MP+H+ +S+ ++IAGYAQ G S
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF----EAGCFVGNA 446
L LF M F SVL+ CA+ +E GK ++ ++K F EAG F +
Sbjct: 430 LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHF--SC 486
Query: 447 LLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++ + + G + EA E I D W+ ++ HG
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHG 527
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 172/352 (48%), Gaps = 28/352 (7%)
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
F T + ++ GK A I +P +S N + Y + +R+ AR +F+
Sbjct: 14 FLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLS-NHFLLLYSKCRRLSAARRVFDHTHDC 72
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
NV S+NT+I+ YA+ + A LFD MPQ D +S+ +IA YA+ G ++ + +LF+EM+
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
++ + +++ C ++ L +QLH V G ++ VGNAL+ Y K G ++
Sbjct: 133 EAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190
Query: 459 EAYHAFEEIV-DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
EA F + D+D +SWN+M+ Y +H G AL L+ M G+ D T+ +L+A
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG--------RLDEAQNLMKNM 569
++ + G ++ + + G NS + ++DL + G DE N
Sbjct: 251 TNVQDLLGGLQFHAKLIKS-GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN----- 304
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLS 616
PD W ++ LY +L+++A E +++ P++ + ++S
Sbjct: 305 ---PDLVLWNTMISGYSLY--EDLSDEALECFRQLQGVGHRPDDCSLVCVIS 351
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 141/603 (23%), Positives = 242/603 (40%), Gaps = 139/603 (23%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRH---LNSKSRNKPKP------AG 57
RQ +CI H+ ++ L + + P+ L H L SK R
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ +N I+ + + + A +F+ MP+ SVSYN +I+ Y G PA Q+F +
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAA--RNLFEMMPKRDVVSW----NTMLSGYAQNGYAD 171
M + L +SG + ++ R L + + S+ N +++ Y++NG+
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190
Query: 172 AARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLFESKAN----WEVVSWNSLMGGF 226
ARRIF + E ++E+SWN ++ AY+Q+ +A L+ ++ + S++ F
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250
Query: 227 VK-QKRLG-----------------------------------DAKWIFDRMPVRDEVSW 250
Q LG D + +FD + D V W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310
Query: 251 NTMITGYAQNNYLA-EAQRLFEE------------------------------------- 272
NTMI+GY+ L+ EA F +
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLAL 370
Query: 273 ---APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
P + A+++ Y + G + +A+ +FD MPE NTVS+N+MIA
Sbjct: 371 KLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIA------------ 418
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSG 385
GYAQ G + +LF RM + D I++ +++A A +G
Sbjct: 419 -------------------GYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTG 459
Query: 386 YSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
ED F MK ++G F+ ++ L ++L + + F+ G F
Sbjct: 460 RVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL---IETIPFDPGFFXW 516
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWN--TMIAG-YARHGFGKDALMLFESMKTV 501
+ALL G+VE A A ++ D ++ M+A Y+ +G +DA + + M+
Sbjct: 517 SALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDR 576
Query: 502 GIK 504
G+K
Sbjct: 577 GVK 579
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 39/228 (17%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F L TC L GK LH +K ++ N L++Y KC + A F+
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 469 DKDVISWNTMI-------------------------------AGYARHGFGKDALMLFES 497
D +V S+NT+I A YAR G + A LF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 498 MKTVGIKPDDITMVGILSACS-HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M+ + D T+ GI++AC + GL+ + ++++ G+ ++ +
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQ----LHALSVVTGLDSYVSVGNALITSYSKN 186
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
G L EA+ + + + D +W +++ A Y + KA E+ EM
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVA---YMQHREGSKALELYLEM 231
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 267/744 (35%), Positives = 395/744 (53%), Gaps = 79/744 (10%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE----MMPKRDVVSWNTML 161
G++ A+++FD+M +R ++S+N++ISGY A LF K D S+ +L
Sbjct: 58 GEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVL 117
Query: 162 SGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
S Q + I L + N L+ Y + RI+ A +LFES + V
Sbjct: 118 SACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNV 177
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA-------QNNYLAEAQRL- 269
SWNSL+ G+ + + + +M + N G A NN ++ + L
Sbjct: 178 SWNSLITGYARVGAYEEMLKLLVKMH-HTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLH 236
Query: 270 ---FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
++ D+ TA++ Y + G + +A +F P +N V +NAMIAG++QT+ +D
Sbjct: 237 GYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDID 296
Query: 327 M-----ARELFEAM-----------------TCKNVASW--------------------- 343
A +LF M C ++ ++
Sbjct: 297 KECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFI 356
Query: 344 -NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
+T+I Y+ G F+ P+ D +SW +IAGYAQ+G E +L LF E+ G+
Sbjct: 357 GSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGK 416
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ + T++LS CA++A+ G+Q+HG VK G V N+ + MY K G+++ A
Sbjct: 417 KPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKI 476
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
FEEI + DV+SW+ MI A+HG KDA+ LFE MK+ GI P+ IT +G+L+ACSH GL
Sbjct: 477 TFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGL 536
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
VE+G Y+ SM +DY + N KH TC+VDLL RAGRL +A+N + N F W LL
Sbjct: 537 VEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLL 596
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
CR+Y + AE + E++P+ + YVLL N+Y +G +K+R M+DRG++K
Sbjct: 597 SGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRK 656
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV--------YSTKLV 694
G SW+EV N+VH+F VGD HP IY LE + K ++ G++ STK V
Sbjct: 657 EPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEV 716
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
+G + +HSEKLAV++GI+S+P P++VMKNLRVC DCH +K IS + R
Sbjct: 717 KGTLG-------VNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKR 769
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
IILRD+ RFHHF GSCSC DYW
Sbjct: 770 EIILRDSLRFHHFKEGSCSCNDYW 793
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 201/446 (45%), Gaps = 95/446 (21%)
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA------------ 273
+ K +G+A+ +FDRM R +S+N +I+GY + +A LF EA
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 274 --------PVKD-------------------VFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
+KD VF ++ Y + ++D AR++F++ E
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TC----KNVASWNT 345
+ VSWN++I GY + + +L M +C N+ S+
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233
Query: 346 MITG--------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS- 384
+ G YA++G + A LF P + + + A+IAG+ Q+
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293
Query: 385 ----GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
+ ++L+LF +M+R G + + F+S++ C ++ + E GKQ+H + K ++
Sbjct: 294 DIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSD 353
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
F+G+ L+ +Y GS E+ F D++SW TMIAGYA++G + AL LF +
Sbjct: 354 EFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLA 413
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYG---VIPNSKHYTCMVDLLGRA 556
G KPD+ + +LSAC+ G + + Y++ G ++ NS+ + + ++
Sbjct: 414 SGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQ-----ISMYAKS 468
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALL 582
G LD A+ + + PD +W ++
Sbjct: 469 GNLDSAKITFEEIK-NPDVVSWSVMI 493
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 124/317 (39%), Gaps = 56/317 (17%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDP--- 110
K D DI + + + G A+ +F + P ++ V YNAMI+G++ +D
Sbjct: 241 KQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECA 300
Query: 111 --ARQVFDQMP---------------------------------------QRDLVSWNVM 129
A ++F QM Q D + +
Sbjct: 301 YEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTL 360
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNE 185
I Y S F PK D+VSW TM++GYAQNG ++A +F +L + +E
Sbjct: 361 IELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDE 420
Query: 186 ISWNGLLAAY--VQNGRIEEACMLFESKANWEVVS--WNSLMGGFVKQKRLGDAKWIFDR 241
+L+A V R E + K ++ NS + + K L AK F+
Sbjct: 421 FIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEE 480
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEA 297
+ D VSW+ MI AQ+ + +A LFE + T+ +++ G V+E
Sbjct: 481 IKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEG 540
Query: 298 RMIFDAMPEKNTVSWNA 314
+++M + + N
Sbjct: 541 LRYYESMKKDYDMKINV 557
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------PQRDLVS--- 125
G + L FNS P+ VS+ MI+GY NGQ + A +F ++ P +++
Sbjct: 368 GSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTML 427
Query: 126 ------------------------------WNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N IS Y ++ +L +A+ FE + DVV
Sbjct: 428 SACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVV 487
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES- 210
SW+ M+ AQ+G+A A +F+ M + N+I++ G+L A G +EE +ES
Sbjct: 488 SWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESM 547
Query: 211 KANWE----VVSWNSLMGGFVKQKRLGDAK-WIFDRMPVRDEVSWNTMITG 256
K +++ V ++ + RL DAK +I + V W T+++G
Sbjct: 548 KKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSG 598
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 20/242 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMP---K 151
+ +I Y L G + + F+ P+ D+VSW MI+GY +N +A LF E++ K
Sbjct: 358 STLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKK 417
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACML 207
D TMLS A + ++ ++ I N ++ Y ++G ++ A +
Sbjct: 418 PDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKIT 477
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYL 263
FE N +VVSW+ ++ + DA +F+ M +++++ ++T + +
Sbjct: 478 FEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLV 537
Query: 264 AEAQRLFEEAPVKD------VFTWTAMVSGYVQNGKVDEAR-MIFDAMPEKNTVSWNAMI 316
E R +E KD V T +V + G++ +A+ I ++ + V W ++
Sbjct: 538 EEGLRYYESMK-KDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLL 596
Query: 317 AG 318
+G
Sbjct: 597 SG 598
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L+ +T ++ + S GK H ++K F F+ N L +Y K G + A
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+ + ++ VIS+N +I+GY GF A+ LF + +K D + G+LSAC
Sbjct: 67 FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
G + + + G+ ++D+ + R+D A+ L ++ E D +W +L+
Sbjct: 127 ALG-KVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSD-ELDNVSWNSLIT 184
Query: 584 ACRLYGKTELAEKAAEVIFEM 604
Y + E+ +++ +M
Sbjct: 185 G---YARVGAYEEMLKLLVKM 202
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/557 (40%), Positives = 333/557 (59%), Gaps = 16/557 (2%)
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFTWTAMVSGY- 288
+ +F ++ + W +I GYA E+ L+ PV FT+TA++
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVS--FTFTALLKACS 150
Query: 289 ----VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
V G+ + I + N +I YV+ + +F+ M ++V SW
Sbjct: 151 AALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWT 210
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++I YA+ G + A LFD +P D ++W A++ GYAQ+ ++L +F M+ G +
Sbjct: 211 SLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKT 270
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGF--EAGCFVGNALLVMYCKCGSVEEAYH 462
+ V+S CA L + + + + GF + VG+AL+ MY KCGSVE+AY
Sbjct: 271 DEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYK 330
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
FE + +++V S+++MI G+A HG A+ LF+ M IKP+ +T +G+L+ACSH G+
Sbjct: 331 VFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGM 390
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
VE+G + F M +GV P+ HY CMVDLLGRAGRL+EA NL+K MP P WGALL
Sbjct: 391 VEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALL 450
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
GACR++G ++A+ AA +FE+EP G Y+LLSN+YA++GRW DVSKVR MR +G+KK
Sbjct: 451 GACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKK 510
Query: 643 VTGYSWLEVQNK-VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
G SW+E + +H F GD HP+ I LE+L +LK G+ + V +D+ +E
Sbjct: 511 NPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDE 570
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EK+ +L HSEKLA+A+G+L+ AG IR++KNLR+CEDCH+ + S+I GR I++RDN
Sbjct: 571 EKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDN 630
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHHF G CSCG++W
Sbjct: 631 MRFHHFRDGRCSCGNFW 647
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 19/309 (6%)
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAY--- 195
R +F+ + + W ++ GYA G + +++ M + ++ LL A
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152
Query: 196 --VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
V GR + ++ N+L+ +VK LG +FD M RD +SW ++
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
I YA+ + A LF+ P+KD+ WTAMV+GY QN + EA +F+ M +
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 314 AMIAGYVQ-------TKRMDMARELFEAM---TCKNVASWNTMITGYAQSGEITHARNLF 363
+ G + K + R++ E NV + +I YA+ G + A +F
Sbjct: 273 VTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVF 332
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
+RM + + S++++I G+A G + ++ LF EM + + NR F VL+ C++ +E
Sbjct: 333 ERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVE 392
Query: 424 LGKQLHGQL 432
G+QL +
Sbjct: 393 QGQQLFAMM 401
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 140/281 (49%), Gaps = 39/281 (13%)
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+ R +F ++ + W A+I GYA G +S+ L+ M+R G FT++L C+
Sbjct: 91 YPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACS 150
Query: 418 NLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
+ LG+Q+H Q + + GF + +VGN L+ MY KCG + + F+E++D+DVISW
Sbjct: 151 AALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWT 210
Query: 477 T-------------------------------MIAGYARHGFGKDALMLFESMKTVGIKP 505
+ M+ GYA++ ++AL +FE M+ G+K
Sbjct: 211 SLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKT 270
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY--TCMVDLLGRAGRLDEAQ 563
D++T+VG++SAC+ G K + + G P S + ++D+ + G +++A
Sbjct: 271 DEVTLVGVISACAQLG-AAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAY 329
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ + M E + ++ +++ ++G LA A E+ EM
Sbjct: 330 KVFERME-ERNVYSYSSMIVGFAMHG---LAGAAMELFDEM 366
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 178/401 (44%), Gaps = 53/401 (13%)
Query: 5 NRLRQLHS--------SC--ILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPK 54
N+++Q+H+ C +L + +++ +L P +PYP L + P
Sbjct: 53 NQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVP--MDPYP-------RLVFQQVEYPN 103
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNGQLDP 110
P W I + G ++ ++NSM R+ S ++ A++ ++
Sbjct: 104 PF------LWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNL 157
Query: 111 ARQVFDQMP-----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
RQV Q DL N +I YV+ L +F+ M RDV+SW +++ YA
Sbjct: 158 GRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYA 217
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVSWNSLMG 224
+ G +AA +FD + K+ ++W ++ Y QN R EA +FE +A +L+G
Sbjct: 218 KVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVG 277
Query: 225 GFVKQKRLGDAK---WIFDRM------PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
+LG AK W+ D P + V + +I YA+ + +A ++FE
Sbjct: 278 VISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEE 337
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMAREL 331
++V+++++M+ G+ +G A +FD M + N V++ ++ ++ ++L
Sbjct: 338 RNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQL 397
Query: 332 FEAM-TCKNVAS----WNTMITGYAQSGEITHARNLFDRMP 367
F M C VA + M+ ++G + A NL MP
Sbjct: 398 FAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMP 438
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 64/352 (18%)
Query: 104 LNGQLDP-ARQVFDQMPQRDLVSWNVMISGY---------------VRNKSLSAARNLFE 147
L+ +DP R VF Q+ + W +I GY +R + + F
Sbjct: 84 LDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFT 143
Query: 148 MMPK-------------------------RDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
+ K D+ NT++ Y + G R+FD ML+
Sbjct: 144 ALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLD 203
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
++ ISW L+ AY + G +E A LF+ ++V+W +++ G+ + R +A +F+RM
Sbjct: 204 RDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERM 263
Query: 243 PV----RDEVSWNTMITGYAQ------NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
DEV+ +I+ AQ N++ + P +V +A++ Y + G
Sbjct: 264 QAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCG 323
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMIT 348
V++A +F+ M E+N S+++MI G+ A ELF+ M N ++ ++T
Sbjct: 324 SVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLT 383
Query: 349 GYAQSGEITHARNLFDRM-------PQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ +G + + LF M P D +A ++ ++G E++L L
Sbjct: 384 ACSHAGMVEQGQQLFAMMEECHGVAPSED--HYACMVDLLGRAGRLEEALNL 433
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 34/333 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I +++ GC VF+ M R +S+ ++I Y G ++ A ++FD +P
Sbjct: 174 DLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLP 233
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARR 175
+D+V+W M++GY +N A +FE M K D V+ ++S AQ G A A
Sbjct: 234 MKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANW 293
Query: 176 IFDRMLE------KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
+ D + N + + L+ Y + G +E+A +FE V S++S++ GF
Sbjct: 294 VRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMH 353
Query: 230 KRLGDAKWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLF---EE----APVKD 277
G A +FD M ++ E+ N ++T + + + Q+LF EE AP +D
Sbjct: 354 GLAGAAMELFDEM-LKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSED 412
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAR----ELF 332
+ MV + G+++EA + MP + W A++ DMA+ LF
Sbjct: 413 --HYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLF 470
Query: 333 EAMTCKNVASWNTMITGYAQSG---EITHARNL 362
E + + ++ + YA +G +++ R L
Sbjct: 471 E-LEPNGIGNYILLSNIYASAGRWDDVSKVRKL 502
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 10/262 (3%)
Query: 383 QSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
++ Y + + FI R +++ S SVL C ++ + KQ+H + + G E C
Sbjct: 15 KTSYCQLQTQSFIPFSVRQEQKILESRLVSVLHGCTHINQV---KQVHAHIFRKGLEQCC 71
Query: 442 FVGNALLVMYCKCGSVEEAYH--AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
FV LL K + Y F+++ + W +I GYA G ++++L+ SM+
Sbjct: 72 FVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMR 131
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
GI P T +L ACS V G + G + ++D+ + G L
Sbjct: 132 RQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCL 191
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
+ M + D +W +L+ A Y K E A+E+ + ++ + + Y
Sbjct: 192 GCGHRVFDEM-LDRDVISWTSLIVA---YAKVGNMEAASELFDGLPMKDMVAWTAMVTGY 247
Query: 620 AASGRWGDVSKVRLKMRDRGVK 641
A + R + +V +M+ GVK
Sbjct: 248 AQNARPREALEVFERMQAAGVK 269
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/692 (35%), Positives = 374/692 (54%), Gaps = 73/692 (10%)
Query: 150 PKRDVVSWNTMLSGYAQNG--YADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEE 203
P V S + Y NG + + + I R+L +++ N +L + G
Sbjct: 7 PTSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNY 66
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ ++F + WN+++ G V + DA ++ M G+ NN+
Sbjct: 67 SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRG----------GGFLPNNFT 116
Query: 264 ------AEAQRLFEEAPVK------------DVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
A A++L +K DVF T+++S YV+ D+A +FD +P
Sbjct: 117 IPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP 176
Query: 306 EKNTVSWNAMIAGYVQT-----------KRMDMA-------------------------- 328
+KN VSW A+I GY+ + K ++M
Sbjct: 177 DKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEW 236
Query: 329 --RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
R + ++ +NV +++ Y + G + A +F MP+ D +SW+ +I GYA +G
Sbjct: 237 IDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGL 296
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+ +L LF +M+ + + VLS CA L +L+LG + + F + +G A
Sbjct: 297 PQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA 356
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCGSV +A+ F + KD + WN M+ G + +G K LF ++ GI+PD
Sbjct: 357 LIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPD 416
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+ T +G+L C+H G V +G ++F +M R + + P+ +HY CMVDLLGRAG L+EA L+
Sbjct: 417 ENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
NMP +P+A WGALLG C+L+ T LAE+ + + E+EP N+G YV LSN+Y+ + RW
Sbjct: 477 NNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWE 536
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+ K+R M+++ ++K+ SW+E+ VH F VGD H ++IYA L+EL +LK G
Sbjct: 537 EAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
V +T+ VL D+ EEEKEH L YHSEKLAVA+G+++ P IRV+KNLRVC DCH+AIK
Sbjct: 597 HVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIK 656
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKI R II+RD NRFH F GSCSC DYW
Sbjct: 657 LISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 155/368 (42%), Gaps = 28/368 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
+I WN I + C D A+H++ SM P ++ + L+ +L
Sbjct: 78 NIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIH 137
Query: 114 --VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ D+ ++S YV+ + A +F+ +P ++VVSW +++GY +G+
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFR 197
Query: 172 AARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLM 223
A F ++LE + S +LAA + G + +S V SL+
Sbjct: 198 EAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLL 257
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVF 279
+VK L A IF MP +D VSW+TMI GYA N +A LF E D +
Sbjct: 258 DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCY 317
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAM 335
T ++S G +D M N V A+I Y + + A E+F AM
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSL 391
K+ WN M+ G + +G +LF + +H D ++ ++ G G+ +
Sbjct: 378 KRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGR 437
Query: 392 RLFIEMKR 399
+ F MKR
Sbjct: 438 QFFNNMKR 445
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 167/402 (41%), Gaps = 81/402 (20%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ ++ +++ D AL VF+ +P ++ VS+ A+I+GY+ +G A
Sbjct: 142 KAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIG 201
Query: 114 VFDQMPQ---------------------------------------RDLVSWNVMISGYV 134
F ++ + R++ ++ YV
Sbjct: 202 AFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYV 261
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
+ +L A +F MP++D+VSW+TM+ GYA NG A +F +M L+ + + G
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 191 LLAAYVQNGRIE----EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+L+A G ++ + ++ ++ V +L+ + K + A IF M +D
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKD 381
Query: 247 EVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFD 302
V WN M+ G + N + LF E+ ++ D T+ ++ G G V+E R F+
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
M +++ ++ + M+ ++G + A L
Sbjct: 442 NMKRVFSLT--------------------------PSIEHYGCMVDLLGRAGLLNEAHQL 475
Query: 363 FDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMKRY 400
+ MP + + + W A++ G + + +E L+ IE++ +
Sbjct: 476 INNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPW 517
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/546 (41%), Positives = 343/546 (62%), Gaps = 18/546 (3%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D ++ N ++ Y++ + A++LF+E PV+ + +W MV + QNG ++A ++F M
Sbjct: 81 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 140
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-------------NVASWNTMITGYAQ 352
++ T ++ V +FE CK NV ++ YA+
Sbjct: 141 KEGTSCSEFTVSSVVCACAAKCC--VFE---CKQLHGFALKTALDSNVFVGTALLDVYAK 195
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G + A +F+ MP+ ++W++++AGY Q+ E++L LF + G N+ +S
Sbjct: 196 CGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSA 255
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
LS CA A+L GKQ+ K G + FV ++L+ MY KCG +EEAY F + +K+V
Sbjct: 256 LSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNV 315
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+ WN +++G++RH +A++ FE M+ +GI P+DIT + +LSACSH GLVEKG +YF
Sbjct: 316 VLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDL 375
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M R + V PN HY+CMVD+LGRAG L EA++ + MPF+ A+ WG+LL +CR+Y E
Sbjct: 376 MIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLE 435
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
LAE AA+ +FE+EP NAG +VLLSN+YAA+ RW +V++ R +++ KK G SW+E++
Sbjct: 436 LAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIK 495
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
+KVH+F VG+ HP IY LE+L ++K+ G+ T+ LHDV E K+ +LR+HSE
Sbjct: 496 HKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSE 555
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLA+ +GI+ +P G PIR+MKNLR+C DCH+ +K S I R II+RD NRFHHF G C
Sbjct: 556 KLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYC 615
Query: 773 SCGDYW 778
SCG++W
Sbjct: 616 SCGEFW 621
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 146/302 (48%), Gaps = 47/302 (15%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L + I+ N L+ Y + G +E A LF+ +VSWN+++G + A +F
Sbjct: 78 LRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFM 137
Query: 241 RMPVR----DEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNG 292
+M E + ++++ A + E ++L + A +VF TA++ Y + G
Sbjct: 138 QMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCG 197
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF-------------------- 332
V +A ++F+ MPE++ V+W++M+AGYVQ + + A LF
Sbjct: 198 LVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALS 257
Query: 333 --------------EAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+A++CK N+ +++I YA+ G I A +F + + + +
Sbjct: 258 ACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVL 317
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W AI++G+++ S +++ F +M++ G N + SVLS C++L +E G++ ++
Sbjct: 318 WNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMI 377
Query: 434 KV 435
+V
Sbjct: 378 RV 379
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 177/379 (46%), Gaps = 42/379 (11%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
R +++ N +++ Y G ++ AR++FD+MP R LVSWN M+ + +N A LF
Sbjct: 79 RADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQ 138
Query: 149 MPKRDV----VSWNTMLSGYAQNGYADAARRI----FDRMLEKNEISWNGLLAAYVQNGR 200
M K + ++++ A +++ L+ N LL Y + G
Sbjct: 139 MQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGL 198
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITG 256
+++A ++FE V+W+S++ G+V+ + +A +F R ++ + ++ ++
Sbjct: 199 VKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 258
Query: 257 YAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
A L E +++ + ++F ++++ Y + G ++EA +F ++ EKN V W
Sbjct: 259 CAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLW 318
Query: 313 NAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
NA+++G+ + R A FE M C N ++ ++++ + G + R FD M +
Sbjct: 319 NAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIR 378
Query: 369 HDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT-------SVLSTC 416
+S ++ ++ ++G L E K + ++R PF S+L++C
Sbjct: 379 VHNVSPNVLHYSCMVDILGRAG-------LLHEAKDF---IDRMPFDATASMWGSLLASC 428
Query: 417 ANLASLELGKQLHGQLVKV 435
+LEL + L ++
Sbjct: 429 RIYRNLELAEVAAKHLFEI 447
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S+ N A++E G H Q+++VG A N L+ MY KCG VE A F+E+ + ++
Sbjct: 56 SSARNRAAIE-GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLV 114
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWNTM+ + ++G + AL+LF M+ G + T+ ++ AC+ V + + +
Sbjct: 115 SWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQ-LHGF 173
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+ N T ++D+ + G + +A + + MP D TW +++ Y + EL
Sbjct: 174 ALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVAG---YVQNEL 229
Query: 594 AEKA 597
E+A
Sbjct: 230 YEEA 233
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 152/365 (41%), Gaps = 67/365 (18%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPR---------------------------------- 89
WN + +H +NG C+ AL +F M +
Sbjct: 116 WNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFAL 175
Query: 90 RSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
++++ N + LL+ G + A VF+ MP+R V+W+ M++GYV+N+ A
Sbjct: 176 KTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALV 235
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE---------KNEISWNGLLAAY 195
LF + N A + A A I + ++ N + L+ Y
Sbjct: 236 LFHRAQAMG-LEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMY 294
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWN 251
+ G IEEA +F S VV WN+++ GF + R +A F++M +++++
Sbjct: 295 AKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYI 354
Query: 252 TMITGYAQNNYLAEAQRLFE-----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++++ + + + ++ F+ +V ++ MV + G + EA+ D MP
Sbjct: 355 SVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPF 414
Query: 307 KNTVS-WNAMIAGYVQTKRMDM----ARELFEAMTCKNVASWNTMITGYAQSG---EITH 358
T S W +++A + +++ A+ LFE + N + + YA + E+
Sbjct: 415 DATASMWGSLLASCRIYRNLELAEVAAKHLFE-IEPHNAGNHVLLSNIYAANDRWEEVAR 473
Query: 359 ARNLF 363
ARNL
Sbjct: 474 ARNLL 478
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 255/694 (36%), Positives = 383/694 (55%), Gaps = 44/694 (6%)
Query: 100 SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+G L G+L AR V N +I+ Y L++A LF MP+R+ VSW T
Sbjct: 183 AGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTT 242
Query: 160 MLSGYAQNGYADAARRIFDRMLE------KNEISWNGLLAAYVQNGRIEEACMLFESKA- 212
++SG +QN A F M + +S AA + +C S
Sbjct: 243 LVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGF 302
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ E+ ++L + K L +A +FD+MP +D V+W MI GYA+N L A F +
Sbjct: 303 DTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRD 362
Query: 273 -------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
+ VF SG +++G + + ++ AG+
Sbjct: 363 MKREGLVGADQHVFCSVLSASGGLKDGWLSK------------SIHCCVTKAGF------ 404
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH-DCISWAAIIAGYAQS 384
EL VA N +I YA+S ++ A + P + +S ++I GY ++
Sbjct: 405 ----EL-------EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIET 453
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
E++L +++E++R G N F+S++ CA A LE G QLH Q++K FVG
Sbjct: 454 DCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVG 513
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
+ L+ MY KCG + + F EI + I+WN +I +A+HG G++A+ F+ M GI+
Sbjct: 514 STLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIR 573
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
P+ I V +L+ACSH GLV++G +YFYSM +G+ P +HY+C++D GRAGRLDEA
Sbjct: 574 PNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYK 633
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
+ MP +P+A W +LLGACR+ G EL E AA+ + ++EP N G++V LS +YA+ G+
Sbjct: 634 FISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQ 693
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W DV VR MRD +KK+ G+SW++ K H F D HP++ IY LEEL ++K+
Sbjct: 694 WEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKE 753
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G++ T + ++ + KE +LRYHSE++AVA+ ++S+PA +PI V KNLR+C DCH A
Sbjct: 754 EGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTA 813
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K I K+ R II+RDN+RFHHF G CSCGDYW
Sbjct: 814 FKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 236/536 (44%), Gaps = 43/536 (8%)
Query: 100 SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+G L G+L AR V N +I+ Y L++A LF MP+R+ VSW T
Sbjct: 33 AGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTT 92
Query: 160 MLSGYAQN----------------GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI-- 201
++SG +QN G A R I++ + L A++ +G
Sbjct: 93 LVSGLSQNLMHADALAAFAAMRRAGVA-PTRLIYETKFHNTLGPKHTLAASHCHSGPTLM 151
Query: 202 ----EEACMLFESKANWEVVSWNSLM-----GGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+ + A V SL+ G +++ RL A+ + N
Sbjct: 152 VKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANH 211
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
+IT Y+ LA A RLF P ++ +WT +VSG QN +A F AM
Sbjct: 212 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 271
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNT-------MITGYAQSGEITHARNLFDR 365
++ + A + T ++T + Y++ G ++ A +FD+
Sbjct: 272 RFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMYSKCGLLSEACRVFDQ 331
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG-ERLNRSPFTSVLSTCANLASLEL 424
MPQ D ++W A+I GYA++G E ++ F +MKR G ++ F SVLS L L
Sbjct: 332 MPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWL 391
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK---DVISWNTMIAG 481
K +H + K GFE V NAL+ MY K VE A + +D +V+S +MI G
Sbjct: 392 SKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK--IDPGGWNVVSGTSMIDG 449
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y ++AL+++ ++ G++P++ T ++ C+ L+E+G + ++ +I
Sbjct: 450 YIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQ-LHAQVIKTDLIR 508
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+S + +VD+ G+ G + + L + + D A W A++ +G A +A
Sbjct: 509 DSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHGREAIQA 563
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 198/477 (41%), Gaps = 76/477 (15%)
Query: 72 MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMIS 131
+R G A V + S+ N +I+ Y L A ++F MP+R+ VSW ++S
Sbjct: 186 LRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVS 245
Query: 132 GYVRNKSLSAARNLFEMMPKRDV-------------------------------VSWNTM 160
G +N + A F M + V V ++T
Sbjct: 246 GLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTE 305
Query: 161 L-------SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
L Y++ G A R+FD+M +K+ ++W ++ Y +NG +E A + F
Sbjct: 306 LFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKR 365
Query: 214 WEVVSWN--------SLMGGFVKQKRLGDAKWIFDRMPVRDEVSW-NTMITGYAQNNYLA 264
+V + S GG + EV+ N +I YA++ +
Sbjct: 366 EGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVE 425
Query: 265 EAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAG- 318
A R+ + P +V + T+M+ GY++ V+EA +I+ + E N ++++MI G
Sbjct: 426 SASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGC 485
Query: 319 ------------YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
+ Q + D+ R+ F +T++ Y + G I+ + LF+ +
Sbjct: 486 AMQALLEQGAQLHAQVIKTDLIRDSFVG---------STLVDMYGKCGLISLSMQLFNEI 536
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG- 425
I+W A+I +AQ G+ ++++ F M G R N F S+L+ C++ ++ G
Sbjct: 537 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGL 596
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
K + G E + ++ Y + G ++EAY E+ + + W +++
Sbjct: 597 KYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 653
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 152/393 (38%), Gaps = 66/393 (16%)
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
G + L A+ + A F +++ Y + A +F AMP +N VSW +
Sbjct: 34 GDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTL 93
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
++G Q A F AM VA + T N P+H
Sbjct: 94 VSGLSQNLMHADALAAFAAMRRAGVAPTRLIYE--------TKFHNTLG--PKH------ 137
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP---------FTSVLSTCANLASLELGK 426
+ A + SG + + +K +G+RL R P S+L +C L G+
Sbjct: 138 TLAASHCHSGPT-------LMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGR 190
Query: 427 QLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
LH +LV G A F+ N L+ MY C + A F + ++ +SW T+++G +++
Sbjct: 191 LLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQN 250
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILS------------ACSHTGLVEKGTEYFYSM 533
DAL F +M+ G+ P + +C+ + V TE F +
Sbjct: 251 LMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVAS 310
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
N + D+ + G L EA + MP + DA W A++ Y K
Sbjct: 311 N--------------LADMYSKCGLLSEACRVFDQMP-QKDAVAWTAMIDG---YAKNGS 352
Query: 594 AEKAAEVIFEMEPE---NAGMYVLLSNLYAASG 623
E A +M+ E A +V S L A+ G
Sbjct: 353 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGG 385
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 165/381 (43%), Gaps = 43/381 (11%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
+ G A VF+ MP++ +V++ AMI GY NG L+ A F M + LV +
Sbjct: 318 KCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGAD----Q 373
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
+V LSA+ L + + + T + G+ E N L+
Sbjct: 374 HVFCSVLSASGGLKDGWLSKSIHCCVT------KAGF------------ELEVAVRNALI 415
Query: 193 AAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DE 247
Y ++ +E A + + W VVS S++ G+++ + +A I+ + + +E
Sbjct: 416 DMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNE 475
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
++++MI G A L + +L + ++D F + +V Y + G + + +F+
Sbjct: 476 FTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 535
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHA 359
+ + ++WNA+I + Q A + F+ M + ++ +++T + +G +
Sbjct: 536 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG 595
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
F M + I ++ II Y ++G +++ + EM + N + S+L
Sbjct: 596 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP---IKPNAYGWCSLLG 652
Query: 415 TCANLASLELGKQLHGQLVKV 435
C S ELG+ L+K+
Sbjct: 653 ACRMRGSKELGEVAAQNLMKL 673
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 155/363 (42%), Gaps = 35/363 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMI-------SGYLLNGQLDPAR 112
D W I + +NG ++A+ F M R V + + SG L +G L +
Sbjct: 336 DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSI 395
Query: 113 Q--VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-DVVSWNTMLSGYAQNGY 169
V + ++ N +I Y ++ + +A + ++ P +VVS +M+ GY +
Sbjct: 396 HCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDC 455
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS----WNS 221
+ A I+ + +E NE +++ ++ +E+ L +++ ++
Sbjct: 456 VEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST 515
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--- 278
L+ + K + + +F+ + R +++WN +I +AQ+ + EA + F+ +
Sbjct: 516 LVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPN 575
Query: 279 -FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
+ ++++ G VDE F +M E + + ++ +I Y + R+D A +
Sbjct: 576 HIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFI 635
Query: 333 EAMTCK-NVASWNTMI-----TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
M K N W +++ G + GE+ A+NL P + I ++ YA G
Sbjct: 636 SEMPIKPNAYGWCSLLGACRMRGSKELGEVA-AQNLMKLEPGNTGIH-VSLSGIYASLGQ 693
Query: 387 SED 389
ED
Sbjct: 694 WED 696
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 397 MKRYGERLNRSP---------FTSVLSTCANLASLELGKQLHGQLVKVGFEAG-CFVGNA 446
+K +G+RL R P S+L +C L G+ LH +LV G A F+ N
Sbjct: 2 VKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANH 61
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
L+ MY C + A F + ++ +SW T+++G +++ DAL F +M+ G+ P
Sbjct: 62 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAP 120
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/675 (34%), Positives = 382/675 (56%), Gaps = 46/675 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
+++ N +I+ YV+ L AR LF+ M R VVS+N ++ GY +G ++F M+
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 182 ----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+ NE + +L+A +GR+ E + + + + + FVK
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEG-----MQCHGFLFKFGLVFHHFVK--------- 159
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP-----VKDVFTWTAMVSGYVQNG 292
++++ Y++ ++ A ++ E D F + ++++ V++G
Sbjct: 160 -------------SSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESG 206
Query: 293 KVDEARMIFDAMPEKNTVSWNAM----IAGYVQTKR-----MDMARELFEAMTCKNVASW 343
++ EA + M ++ V W+++ + G R + + +L + +V
Sbjct: 207 RLGEAVEVLGRMVDEGVV-WDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVG 265
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+ ++ + + G++ AR +FD + + + W +++ Y Q+G E++L L M R G
Sbjct: 266 SMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTM 325
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N F +L+ A +A+L G LH ++ K+G + VGNAL+ MY KCG ++ +Y
Sbjct: 326 SNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDV 385
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F ++ ++D+I+WN MI GY++HG GK AL+LF+ M + G P+ +T VG+LSAC+H LV
Sbjct: 386 FFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALV 445
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+G Y + + + V P +HYTC+V +L RAG L+EA+N M+ + D W LL
Sbjct: 446 NEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLN 505
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
AC ++ L K AE I +M+P + G Y LLSN+YA + W V+ +R MR+R VKK
Sbjct: 506 ACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKE 565
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G SW+E++N VH FS + HPE +IY ++ L +KQ G+V + + VLHDV +E+K
Sbjct: 566 PGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQK 625
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E L YHSEKLA+AYG++ IP+ PIRV+KNLR+CEDCH A+K ISK+ RLII+RD +R
Sbjct: 626 ESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASR 685
Query: 764 FHHFSGGSCSCGDYW 778
FHHF G+C+C D+W
Sbjct: 686 FHHFRDGTCTCTDHW 700
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 227/488 (46%), Gaps = 44/488 (9%)
Query: 30 ANTNPYPSKKTLKRHLNSKSRNKPKPA-GDWDIRQWNVAITTHMRNGCCDSALHVFNSMP 88
ANT K++ L ++++ + +++I Q N I +++ A ++F+ M
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN---L 145
RS VSYN ++ GYL +G+ ++F +++VS + YV LSA + +
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLF-----KNMVSSLYQPNEYVFTTVLSACAHSGRV 137
Query: 146 FEMMPKRDVV----------SWNTMLSGYAQNGYADAARRIFDRML-----EKNEISWNG 190
FE M + ++++ Y++ + D A ++ + + + +N
Sbjct: 138 FEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNS 197
Query: 191 LLAAYVQNGRIEEAC----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM---- 242
+L A V++GR+ EA + + W+ V++ S+MG + + LG + ++
Sbjct: 198 VLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGG 257
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
D + ++ + + + A+++F+ ++V WT++++ Y+QNG+ +E +
Sbjct: 258 LTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLS 317
Query: 303 AMPEKNTVS--------WNAMIAGYVQTKRMDMARELFEAMTCKN-VASWNTMITGYAQS 353
M + T+S NA AG + D+ E + KN V N +I Y++
Sbjct: 318 CMDREGTMSNEFTFAVLLNA-FAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKC 376
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G I + ++F M D I+W A+I GY+Q G + +L LF +M GE N F VL
Sbjct: 377 GCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVL 436
Query: 414 STCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-D 471
S CA+LA + G QL+K E G ++ + C+ G +EEA + K D
Sbjct: 437 SACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWD 496
Query: 472 VISWNTMI 479
V++W ++
Sbjct: 497 VVAWRVLL 504
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 168/384 (43%), Gaps = 39/384 (10%)
Query: 230 KRLGDAKWIFDRMPVRDE------------VSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
K L K I ++ +R++ + N++I Y + + L A+ LF+E ++
Sbjct: 26 KNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRS 85
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFE 333
V ++ ++ GY+ +G+ E +F M + N + +++ + R +FE
Sbjct: 86 VVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGR------VFE 139
Query: 334 AMTCKNVA----------SWNTMITGYAQSGEITHARNLFDRMP-----QHDCISWAAII 378
M C ++++ Y++ + A + + +D + +++
Sbjct: 140 GMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVL 199
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+SG +++ + M G + + SV+ C + L LG Q+H QL+K G
Sbjct: 200 NALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLT 259
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
FVG+ L+ M+ KCG V A F+ + +++V+ W +++ Y ++G ++ L L M
Sbjct: 260 FDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCM 319
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G ++ T +L+A + + G + ++ G+ ++++ + G
Sbjct: 320 DREGTMSNEFTFAVLLNAFAGMAALRHG-DLLHARVEKLGIKNRVIVGNALINMYSKCGC 378
Query: 559 LDEAQNLMKNMPFEPDAATWGALL 582
+D + ++ +M D TW A++
Sbjct: 379 IDSSYDVFFDMR-NRDIITWNAMI 401
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 123/282 (43%), Gaps = 32/282 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN----------GQLD 109
++ W +T +++NG + L++ + M R ++S N LLN G L
Sbjct: 292 NVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMS-NEFTFAVLLNAFAGMAALRHGDLL 350
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
AR + R +V N +I+ Y + + ++ ++F M RD+++WN M+ GY+Q+G
Sbjct: 351 HARVEKLGIKNRVIVG-NALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGL 409
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEAC-----MLFESKANWEVVSWN 220
A +F ML N +++ G+L+A + E ++ K + +
Sbjct: 410 GKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYT 469
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGY-AQNNY---LAEAQRLFEEAPV 275
++ + L +A+ V+ D V+W ++ NY A+ + + P
Sbjct: 470 CVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDP- 528
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VSW 312
+D+ T+T + + Y + D MI M E+N VSW
Sbjct: 529 RDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSW 570
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/648 (37%), Positives = 373/648 (57%), Gaps = 38/648 (5%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
A F + + D++ WN ++ GY Q DA R++ M + +++ N YV
Sbjct: 38 AHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDM-QISQVHPNCFTFLYVL---- 92
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+AC + + G KQ K+ F + N++++ YA+
Sbjct: 93 -KAC-------------GGTSVEGIGKQIHGQTFKYGFGS----NVFVQNSLVSMYAKFG 134
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIA--- 317
++ A+ +F++ + V +WT+++SGYVQNG EA +F M + N W A+++
Sbjct: 135 QISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMT 194
Query: 318 GYVQTKRMDMARELFEAMTCKN-------VASWNTMITGYAQSGEITHARNLFDRMPQHD 370
Y + + + + +T V S TM YA+ G + AR F+RM + +
Sbjct: 195 AYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM---YAKRGLVEVARFFFNRMEKPN 251
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
I W A+I+GYA +GY E++++LF EM R++ S + A + SLEL + L G
Sbjct: 252 LILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDG 311
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+ K + FV L+ MY KCGS+ A F+ + DKDV+ W+ MI GY HG G++
Sbjct: 312 YISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQE 371
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
A+ L+ MK G+ P+D T +G+L+AC ++GLV++G E F+ M D+G+ P+ +HY+C+V
Sbjct: 372 AICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVV 430
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLLGRAG L++A + + +MP +P + WGALL AC+++ K L E AAE +F ++P N G
Sbjct: 431 DLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTG 490
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YV LSNLYA++ W V+ VRL M +G+ K G+S +E+ + TF VGD HP+
Sbjct: 491 HYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKE 550
Query: 671 IYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIR 730
I+ L+ LE +LK G+V + VLHD+ EE E L +HSE+LAVAYGI+S G +R
Sbjct: 551 IFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLR 610
Query: 731 VMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ KNLR C +CH+AIK ISK+V R II+RD RFHHF G CSCGD+W
Sbjct: 611 ITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 5/255 (1%)
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ +A F + + D + W AII GY Q + +R++++M+ N F VL
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
C + +GKQ+HGQ K GF + FV N+L+ MY K G + A F+++ D+ V+
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SW ++I+GY ++G +AL +F+ M+ +KPD I +V +++A ++ + +G + +
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKS-IHGL 211
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
G+ + + + G ++ A+ M +P+ W A++ Y
Sbjct: 212 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMISG---YANNGY 267
Query: 594 AEKAAEVIFEMEPEN 608
E+A ++ EM +N
Sbjct: 268 GEEAIKLFREMITKN 282
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 157/391 (40%), Gaps = 87/391 (22%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD-- 153
N+++S Y GQ+ AR VFD++ R +VSW +ISGYV+N A N+F+ M + +
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183
Query: 154 ----------------------------------------VVSWNTMLSGYAQNGYADAA 173
V+S TM YA+ G + A
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM---YAKRGLVEVA 240
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV-VSWNSLMGGFVKQKRL 232
R F+RM + N I WN +++ Y NG EEA LF + V ++ + ++
Sbjct: 241 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300
Query: 233 GD---AKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
G A+W+ + RD+ NT +I YA+ + A+ +F+ KDV W+ M+
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
GY +G EA +++ M +A C N ++
Sbjct: 361 MGYGLHGHGQEAICLYNEMK---------------------------QAGVCPNDGTFIG 393
Query: 346 MITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
++T SG + LF MP H ++ ++ ++GY + + M
Sbjct: 394 LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI-- 451
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+ S + ++LS C + LG+ QL
Sbjct: 452 -KPGVSVWGALLSACKIHRKVRLGEIAAEQL 481
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 180/426 (42%), Gaps = 65/426 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N ++ + + G A VF+ + R+ VS+ ++ISGY+ NG A VF +M Q ++
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183
Query: 124 VSWNVMIS--------------------------------------GYVRNKSLSAARNL 145
W ++S Y + + AR
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 243
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRI 201
F M K +++ WN M+SGYA NGY + A ++F M+ KN I+ + A Q G +
Sbjct: 244 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 303
Query: 202 EEACML--FESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
E A L + SK+ + ++ L+ + K + A+ +FDR+ +D V W+ MI GY
Sbjct: 304 ELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGY 363
Query: 258 AQNNYLAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMP----EKNT 309
+ + EA L+ E V T+ +++ +G V E +F MP E +
Sbjct: 364 GLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHH 423
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG-----YAQSGEITHARNLF 363
++ ++ + ++ A + +M K V+ W +++ + GEI A LF
Sbjct: 424 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIA-AEQLF 482
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
P ++ + + YA + + + M + G LN+ S + NL + +
Sbjct: 483 ILDP-YNTGHYVQLSNLYASAHLWTRVANVRLMMTQKG--LNKDLGHSSIEINGNLETFQ 539
Query: 424 LGKQLH 429
+G + H
Sbjct: 540 VGDRSH 545
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q++ QL+ G F+ + G V A+ AF E+ + D++ WN +I GY +
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+ ++ M+ + P+ T + +L AC T VE + + YG N
Sbjct: 65 IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTS-VEGIGKQIHGQTFKYGFGSNVFVQ 123
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+V + + G++ A+ + + + +W +++
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKL-HDRTVVSWTSII 158
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/444 (48%), Positives = 285/444 (64%)
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
M K++ S MIT YA+ G I AR LFD + + D I W +I GYAQ G + L LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+M R N +VLS C +LE G+ +H + G VG +L+ MY KC
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GS+E+A FE I +KDV++WN+M+ GYA HGF +DAL LF+ M +G +P DIT +G+L
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ACSH GLV +G ++FYSM +YG+ P +HY CMV+LLGRAG L+EA L+KNM + D
Sbjct: 181 NACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQD 240
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
WG LLGACRL+G L E+ AE + N+G YVLLSN+YAA+G W V++VR
Sbjct: 241 PVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTL 300
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
M++ G +K G S +EV NKVH F GD HP+ IY LEE+ LK G+ T +V
Sbjct: 301 MKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIV 360
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
LHD+ + +KE L HSEKLA+A+G+++ G I+++KNLRVC DCH K ISKI GR
Sbjct: 361 LHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGR 420
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
+++RD NRFHHF G CSCGDYW
Sbjct: 421 KVVMRDRNRFHHFVNGLCSCGDYW 444
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 23/306 (7%)
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP++ LVS MI+ Y + + AR LF+ + +RD + WN M+ GYAQ+G + +F
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 178 DRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKAN----WEVVSWNSLMGGFVKQ 229
+ML NE++ +L+A Q G +E + N V SL+ + K
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWTAM 284
L DA+ +F+R+ +D V+WN+M+ GYA + + +A RLF+E + D+ T+ +
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDI-TFIGV 179
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTC-K 338
++ G V E F +M ++ + + M+ + ++ A EL + M +
Sbjct: 180 LNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQ 239
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCI---SWAAIIAGYAQSGYSEDSLRLFI 395
+ W T++ G I + + + + ++ + YA +G E R+
Sbjct: 240 DPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRT 299
Query: 396 EMKRYG 401
MK G
Sbjct: 300 LMKESG 305
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR----NKSLSAA 142
MP +S VS AMI+ Y G +D AR +FD + +RD + WNVMI GY + N+ L
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN-----GLLAAYVQ 197
R + + + V+ +LS Q G + R + +E N I N L+ Y +
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHS-YIENNGIGINVRVGTSLIDMYSK 119
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTM 253
G +E+A ++FE +N +VV+WNS++ G+ DA +F M + ++++ +
Sbjct: 120 CGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGV 179
Query: 254 ITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EK 307
+ + ++E + F E V + MV+ + G ++EA + M ++
Sbjct: 180 LNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQ 239
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
+ V W ++ + + ++ E + +N+A+ T +
Sbjct: 240 DPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYV 279
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 49/253 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--------- 118
IT + + G D A +F+ + R ++ +N MI GY +G + +F QM
Sbjct: 13 ITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNE 72
Query: 119 -------------------------PQRDLVSWNV-----MISGYVRNKSLSAARNLFEM 148
+ + + NV +I Y + SL AR +FE
Sbjct: 73 VTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFER 132
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA 204
+ +DVV+WN+M+ GYA +G++ A R+F M + +I++ G+L A G + E
Sbjct: 133 ISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEG 192
Query: 205 CMLFESKANW-----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITGYA 258
F S + +V + ++ + L +A + M + +D V W T++
Sbjct: 193 WKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACR 252
Query: 259 QNNYLAEAQRLFE 271
+ +A +++ E
Sbjct: 253 LHGNIALGEQIAE 265
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 256/740 (34%), Positives = 393/740 (53%), Gaps = 57/740 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS-------LSAAR----- 143
N++I+ + ++ A ++FD+M +RD +SWN MIS Y + LS R
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243
Query: 144 -------NLFEMMPKRDVVSW--------------------NTMLSGYAQNGYADAARRI 176
+L + D+V+ N +++ Y+ G D A +
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESL 303
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEAC-----MLFESKANWEVVSWNSLMGGFVKQKR 231
F M ++ ISWN ++++YVQ+ EA +L + ++++S +G +
Sbjct: 304 FRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEA 363
Query: 232 LGDAKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
L + + I + R + N+++T Y++ N + + +R+FE P DV + + G
Sbjct: 364 LMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGG 423
Query: 288 YVQNGKVDEARMIFDAM------PEKNT---VSWNAMIAGYVQTKRMDMARELFEAMTCK 338
Y V A +F M P T + G + + M + + +
Sbjct: 424 YAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLS 483
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ N++IT YA G++ + +F R+ ISW AIIA + G E++++LF++ +
Sbjct: 484 DEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQ 543
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G +L+R LS+ ANLASLE G QLHG VK G + V NA + MY KCG ++
Sbjct: 544 HAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMD 603
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
+ + WNT+I+GYAR+G+ K+A F+ M +VG KPD +T V +LSACS
Sbjct: 604 CMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACS 663
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H GL++KG +Y+ SM +GV P KH C+VDLLGR G+ EA+ + MP P+ W
Sbjct: 664 HAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIW 723
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
+LL + R + ++ KAA+ + E++P + YVLLSNLYA + RW DV K+R M+
Sbjct: 724 RSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTI 783
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
+ K SWL+++N+V TF +GD H ++IY L+E+ KL++ G+V T LHD
Sbjct: 784 KLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDT 843
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
EE+KEH L HSEKLA+AYG+L +P G IR+ KNLRVC DCH K +S + R I+L
Sbjct: 844 DEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVL 903
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD RFH F GSCSC D+W
Sbjct: 904 RDPYRFHQFKHGSCSCSDFW 923
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 147/581 (25%), Positives = 248/581 (42%), Gaps = 100/581 (17%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ-NGR 200
A+ LF MP+R+VVSW ++ + NG + A + RM ++ + LA V G
Sbjct: 98 AQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGA 157
Query: 201 IEEACMLFESKANWEVVSW-------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
+E+ + A+ V NSL+ F +R+ DA+ +FDRM RD +SWN M
Sbjct: 158 LEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAM 217
Query: 254 ITGYAQNNYLAEAQRLFEE---APVK-DVFTWTAMVS----------------------- 286
I+ Y+ ++ + + VK DV T ++VS
Sbjct: 218 ISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGL 277
Query: 287 ------------GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF-- 332
Y GK+DEA +F M ++ +SWN MI+ YVQ+ A E
Sbjct: 278 HCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQ 337
Query: 333 ---------EAMT-------CKNVASW----------------------NTMITGYAQSG 354
+MT C + + N+++T Y++
Sbjct: 338 LLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCN 397
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ +F+ MP +D +S + GYA +++R+F M+ G + N ++
Sbjct: 398 SMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQG 457
Query: 415 TCANLASL-ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
TC +L L G LH + + G + ++ N+L+ MY CG +E + F I +K VI
Sbjct: 458 TCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVI 517
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWN +IA RHG G++A+ LF + G K D + LS+ ++ +E+G + + +
Sbjct: 518 SWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQ-LHGL 576
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT--WGALLGACRLYGKT 591
+ G+ +S +D+ G+ G++D ++K +P T W L+ YG
Sbjct: 577 SVKNGLDCDSHVVNATMDMYGKCGKMD---CMLKTLPDPAHRPTQCWNTLISGYARYGYF 633
Query: 592 ELAEKAAE--VIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
+ AE + V +P+ YV L +A G + K
Sbjct: 634 KEAEDTFKHMVSVGQKPD----YVTFVALLSACSHAGLIDK 670
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 214/498 (42%), Gaps = 51/498 (10%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL-LAAYVQNGRIEEACML 207
MP R SW T +SG A+ G A + R++ + ++ +G LA+ V AC
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLL-RVMRERDVPLSGFALASLVT------AC-- 51
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
E + E + + + + L +I ++ Y + AQ
Sbjct: 52 -EHRGWQEGAACGAAIHALTHRAGLMGNVYI-----------GTALLHLYGSRGLVLNAQ 99
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV------- 320
RLF E P ++V +WTA++ NG ++EA + + M ++ + +A V
Sbjct: 100 RLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALE 159
Query: 321 -QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ + + + + +V+ N++IT + + A LFDRM + D ISW A+I+
Sbjct: 160 DEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMIS 219
Query: 380 GYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
Y+ + +M R+GE + + + S++S CA+ + LG +H V G
Sbjct: 220 MYSHEEVYSKCFIVLSDM-RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLH 278
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL-MLFES 497
+ NAL+ MY G ++EA F + +DVISWNTMI+ Y + +AL L +
Sbjct: 279 CSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL 338
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKG-TEYFYSMNRDYG---VIPNSKHYTCMVDLL 553
++T P+ +T L ACS + G T + + R +I NS ++ +
Sbjct: 339 LQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNS-----LLTMY 393
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM-- 611
+ +++ + + ++MP D + L G Y E A V M G+
Sbjct: 394 SKCNSMEDTERVFESMPCY-DVVSCNVLTGG---YAALEDVANAMRVFSWM--RGTGIKP 447
Query: 612 -YVLLSNLYAASGRWGDV 628
Y+ + NL GD+
Sbjct: 448 NYITMINLQGTCKSLGDL 465
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 206/481 (42%), Gaps = 70/481 (14%)
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS 125
VA+ + + + C S LH S+P NA+++ Y G+LD A +F M +RD++S
Sbjct: 262 VALGSGIHSLCVSSGLHC--SVPL-----INALVNMYSTAGKLDEAESLFRNMSRRDVIS 314
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA----------QNGYADAARR 175
WN MIS YV++ S A + + D N+M A NG A
Sbjct: 315 WNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHA-M 373
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
I R L+ + N LL Y + +E+ +FES ++VVS N L GG+ + + +A
Sbjct: 374 ILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANA 433
Query: 236 KWIFDRM-PVRDEVSWNTMITGYAQNNYLAEAQR--------LFEEAPVKDVFTWTAMVS 286
+F M + ++ TMI L + + + + D + ++++
Sbjct: 434 MRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLIT 493
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF-------------- 332
Y G ++ + IF + K+ +SWNA+IA V+ R + A +LF
Sbjct: 494 MYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFC 553
Query: 333 --EAMTCK-NVASWN--------TMITGYAQSGEITHAR-NLFDRMPQHDCI-------- 372
E ++ N+AS ++ G + +A +++ + + DC+
Sbjct: 554 LAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPA 613
Query: 373 -----SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
W +I+GYA+ GY +++ F M G++ + F ++LS C++ ++ G
Sbjct: 614 HRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMD 673
Query: 428 LHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGYAR 484
+ + G G ++ + + G EA +E ++ D+I W ++++
Sbjct: 674 YYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI-WRSLLSSSRT 732
Query: 485 H 485
H
Sbjct: 733 H 733
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 325/540 (60%), Gaps = 40/540 (7%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT- 336
V+ T ++ YV+ G +D+AR + D MPE+N VSW AMI+GY Q+ R A ELF M
Sbjct: 76 VYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLR 135
Query: 337 --CK-NVASWNTMITG-----------------------------------YAQSGEITH 358
CK N + T++T Y +SG I
Sbjct: 136 AGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQE 195
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
AR +FD +P+ D +S AII+GYAQ G +++L LF ++ G + N FT++L++ +
Sbjct: 196 ARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSG 255
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
LASL GKQ+HG +++ + N+L+ MY KCG + + F+ + + ISWN M
Sbjct: 256 LASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAM 315
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ GY RHG G++ + LF +M T +KPD +T++ +LS CSH GLV++G + F + ++
Sbjct: 316 LMGYGRHGIGQEVVQLFRTM-TEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQN 374
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ + HY C++DLLGR+G+L +A +L+++MPFEP A WG+LLGACR++ + E A
Sbjct: 375 AVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVA 434
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + +MEP NAG YV+LSN+YAA+G W DV +VR M + V K SW+ + +HTF
Sbjct: 435 QKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTF 494
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
+ HP K I A ++E+ +K GFV VLHDV +E+KE ML HSEKLA+ +
Sbjct: 495 HSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITF 554
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G+++ P G I+VMKNLR+C DCHN K +SK+ GR I LRD NRFH G+C+CGDYW
Sbjct: 555 GLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 27/325 (8%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQM------PQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
Y+A I+ + L RQV M P L + +++ YVR +L ARN+ +
Sbjct: 44 YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIIL--YVRCGALDDARNVLDG 101
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIE-- 202
MP+R+VVSW M+SGY+Q+G A +F RML + NE + +L + + I+
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161
Query: 203 EACMLFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
E K N+E + +SL+ + K + +A+ +FD +P RD VS +I+GYAQ
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221
Query: 261 NYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSW 312
EA LF + + T+T +++ ++ + + + K V
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQ 281
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH--- 369
N++I Y + ++ +R +F+ M ++ SWN M+ GY + G LF M +
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVKP 341
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLF 394
D ++ A+++G + G ++ L +F
Sbjct: 342 DSVTLLAVLSGCSHGGLVDEGLDIF 366
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 177/388 (45%), Gaps = 65/388 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD----- 122
I ++R G D A +V + MP R+ VS+ AMISGY +G+ A ++F +M +
Sbjct: 83 IILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANE 142
Query: 123 ------LVSWNV----------------------------MISGYVRNKSLSAARNLFEM 148
L S V ++ Y ++ ++ AR +F+M
Sbjct: 143 FTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDM 202
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAA----RRIFDRMLEKNEISWNGLLA-----AYVQNG 199
+P+RD VS ++SGYAQ G D A R+++ ++ N +++ LL A + G
Sbjct: 203 LPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYG 262
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+ + ++ + + +V NSL+ + K +L ++ +FD MP R +SWN M+ GY +
Sbjct: 263 K-QVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGR 321
Query: 260 NNYLAEAQRLFE---EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-PEKNTV----S 311
+ E +LF E D T A++SG G VDE IFD + E+N V
Sbjct: 322 HGIGQEVVQLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGH 381
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMITGY-----AQSGEITHARNLFDR 365
+ +I ++ ++ A +L E M + A W +++ GE+ A+ L D
Sbjct: 382 YGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVV-AQKLLDM 440
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRL 393
P + ++ + YA +G +D R+
Sbjct: 441 EPG-NAGNYVILSNIYAAAGMWKDVFRV 467
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 115/219 (52%), Gaps = 16/219 (7%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ + ++ C +L G+Q+H +VK + ++ L+++Y +CG++++A + + +
Sbjct: 44 YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS-HTGL--VEK 525
+++V+SW MI+GY++ G +AL LF M G K ++ T+ +L++C H + VE+
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
N + + S ++D+ G++G + EA+ + +P E D + A++
Sbjct: 164 VHSLVVKTNFESHMFVGSS----LLDMYGKSGNIQEARKVFDMLP-ERDTVSCTAIISG- 217
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAA 621
Y + L ++A ++ ++ ++GM YV + L +
Sbjct: 218 --YAQLGLDDEALDLFRQL--YSSGMQCNYVTFTTLLTS 252
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/566 (40%), Positives = 337/566 (59%), Gaps = 35/566 (6%)
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
A+++F R+ D NT+I YA F P+ V ++ M V V
Sbjct: 88 ARFLFYRIRKPDIFIANTLIRAYA-----------FSPNPIDAVVFYSEMTESSVVFPDV 136
Query: 295 DEARMIFDAMPEKNTV-------------SW-------NAMIAGYVQTKRMDMARELFEA 334
++ A E ++ W N ++ Y ++ A +F+
Sbjct: 137 HTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDR 196
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+ ASWN MI GY + G AR +F+ MP D +SW+ +I GY Q ++ L LF
Sbjct: 197 TPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLF 256
Query: 395 IEMKRYGERL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
+M GE++ N S + LS CA+L ++E G+ + + + +G AL+ MY
Sbjct: 257 QDM--MGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYS 314
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCGSVE A F ++ +K+V++W+ MI G A +G GKDAL LF M+ G+KP+++T +G
Sbjct: 315 KCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIG 374
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
IL+ACSH+ LV++G +F+SM YG+ PN+ H+ CMVDL GRAG LD+AQ ++K+MPF+
Sbjct: 375 ILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFK 434
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
P++A WGALL ACR++G TEL E+ + + E++P + G YVLLSN+YAA GRW V+++R
Sbjct: 435 PNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELR 494
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
MR+R V K G S++++ + +H F GD+ HP+ + IYA L E+ +LK G+ T
Sbjct: 495 RMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTG 554
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VL D+ EEEKE L +HSEKLA+A+G++ G IR+ KNLRVC DCH+A K ISKI
Sbjct: 555 QVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIY 614
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD RFHHF GSCSC D+W
Sbjct: 615 NREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 195/451 (43%), Gaps = 56/451 (12%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI-----SWNGLL 192
S+ AR LF + K D+ NT++ YA + A + M E + + ++ LL
Sbjct: 84 SIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLL 143
Query: 193 AAY--VQNGRIEEACMLFESKANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
A + + R+ EA K W EV N L+ + + A +FDR P D
Sbjct: 144 KACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGA 203
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF-DAMPEK 307
SWN MI GY + A+R+FE P +DV +W+ M++GYVQ + E +F D M EK
Sbjct: 204 SWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEK 263
Query: 308 ----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHA 359
+V NA+ A M+ + + M KNV +I Y++ G + A
Sbjct: 264 IEPNESVLVNALSA-CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERA 322
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+F +M + + ++W+A+I G A +G +D+L LF +M+ G + N F +L+ C+
Sbjct: 323 LEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACS-- 380
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
H +LV + GC +++ +Y G A+H M+
Sbjct: 381 ---------HSKLV----DEGCSFFHSMTSIY---GLKPNAHHHC------------CMV 412
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
Y R G A + +SM KP+ +L+AC G E G + R +
Sbjct: 413 DLYGRAGMLDQAQTVIKSMP---FKPNSAIWGALLNACRIHGDTELGEQV---GKRLLEL 466
Query: 540 IPN-SKHYTCMVDLLGRAGRLDEAQNLMKNM 569
PN Y + ++ GR D L + M
Sbjct: 467 DPNHGGRYVLLSNIYAACGRWDRVAELRRMM 497
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 134/311 (43%), Gaps = 49/311 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y G ++ A VFD+ P+ D SWN+MI GY++ +AR +FE MP RDVV
Sbjct: 175 NFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVV 234
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
SW+ M++GY Q +F M +E NE L+A G +E+
Sbjct: 235 SWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQ-------- 286
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQ 267
+WI +R VR V T +I Y++ + A
Sbjct: 287 -----------------------GQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERAL 323
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTK 323
+F + K+V W+AM++G NG+ +A +F M + N V++ ++ +K
Sbjct: 324 EVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSK 383
Query: 324 RMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAI 377
+D F +MT N M+ Y ++G + A+ + MP + + W A+
Sbjct: 384 LVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGAL 443
Query: 378 IAGYAQSGYSE 388
+ G +E
Sbjct: 444 LNACRIHGDTE 454
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 34/283 (12%)
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
VAS + G I +AR LF R+ + D +I YA S D++ + EM
Sbjct: 69 VASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTE 128
Query: 400 YGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ F +L C+ + SL LG+ +H + K+G+ + V N L+ MY CG +E
Sbjct: 129 SSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIE 188
Query: 459 -------------------------------EAYHAFEEIVDKDVISWNTMIAGYARHGF 487
A FE + D+DV+SW+ MI GY +
Sbjct: 189 SAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESR 248
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
K+ L LF+ M I+P++ +V LSAC+H G +E+G M R V + T
Sbjct: 249 FKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERK-NVRLTVRLGT 307
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
++D+ + G ++ A + M E + W A++ + G+
Sbjct: 308 ALIDMYSKCGSVERALEVFHKMK-EKNVLAWSAMINGLAINGQ 349
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 24/273 (8%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + G +SA VF+ P S+N MI GYL G AR++F+ MP RD+V
Sbjct: 175 NFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVV 234
Query: 125 SWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGYADAARRIFD 178
SW+VMI+GYV+ LF+ M P V+ LS A G + + I +
Sbjct: 235 SWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLV--NALSACAHLGAMEQGQWI-E 291
Query: 179 RMLEKNEISW-----NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
R +E+ + L+ Y + G +E A +F V++W++++ G +
Sbjct: 292 RYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGK 351
Query: 234 DAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWTAM 284
DA +F +M ++ +EV++ ++ + + + E F + M
Sbjct: 352 DALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCM 411
Query: 285 VSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMI 316
V Y + G +D+A+ + +MP K N+ W A++
Sbjct: 412 VDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALL 444
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ D WN+ I +++ G SA +F +MP R VS++ MI+GY+ + +F
Sbjct: 199 ECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQD 258
Query: 118 M------PQRDLV----------------SW-----------------NVMISGYVRNKS 138
M P ++ W +I Y + S
Sbjct: 259 MMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGS 318
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ A +F M +++V++W+ M++G A NG A +F +M ++ NE+++ G+L A
Sbjct: 319 VERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNA 378
Query: 195 YVQNGRIEEACMLFES 210
+ ++E C F S
Sbjct: 379 CSHSKLVDEGCSFFHS 394
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
+R I + + G + AL VF+ M ++ ++++AMI+G +NGQ A +F QM
Sbjct: 303 VRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEM 362
Query: 121 RDL----VSWNVMISGYVRNKSLSAARNLFEMMP-----KRDVVSWNTMLSGYAQNGYAD 171
+ + V++ +++ +K + + F M K + M+ Y + G D
Sbjct: 363 QGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLD 422
Query: 172 AARRIFDRM-LEKNEISWNGLLAAYVQNGRIE 202
A+ + M + N W LL A +G E
Sbjct: 423 QAQTVIKSMPFKPNSAIWGALLNACRIHGDTE 454
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/648 (37%), Positives = 373/648 (57%), Gaps = 38/648 (5%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
A F + + D++ WN ++ GY Q DA R++ M + +++ N YV
Sbjct: 53 AHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDM-QISQVHPNCFTFLYVL---- 107
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+AC + + G KQ K+ F + N++++ YA+
Sbjct: 108 -KAC-------------GGTSVEGIGKQIHGQTFKYGFGS----NVFVQNSLVSMYAKFG 149
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIA--- 317
++ A+ +F++ + V +WT+++SGYVQNG EA +F M + N W A+++
Sbjct: 150 QISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMT 209
Query: 318 GYVQTKRMDMARELFEAMTCKN-------VASWNTMITGYAQSGEITHARNLFDRMPQHD 370
Y + + + + +T V S TM YA+ G + AR F+RM + +
Sbjct: 210 AYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM---YAKRGLVEVARFFFNRMEKPN 266
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
I W A+I+GYA +GY E++++LF EM R++ S + A + SLEL + L G
Sbjct: 267 LILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDG 326
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
+ K + FV L+ MY KCGS+ A F+ + DKDV+ W+ MI GY HG G++
Sbjct: 327 YISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQE 386
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
A+ L+ MK G+ P+D T +G+L+AC ++GLV++G E F+ M D+G+ P+ +HY+C+V
Sbjct: 387 AICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVV 445
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLLGRAG L++A + + +MP +P + WGALL AC+++ K L E AAE +F ++P N G
Sbjct: 446 DLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTG 505
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YV LSNLYA++ W V+ VRL M +G+ K G+S +E+ + TF VGD HP+
Sbjct: 506 HYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKE 565
Query: 671 IYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIR 730
I+ L+ LE +LK G+V + VLHD+ EE E L +HSE+LAVAYGI+S G +R
Sbjct: 566 IFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLR 625
Query: 731 VMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ KNLR C +CH+AIK ISK+V R II+RD RFHHF G CSCGD+W
Sbjct: 626 ITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 183/391 (46%), Gaps = 42/391 (10%)
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLA--------------EAQRLFEEAPVKDVFT 280
+ W+F + D+V +++G + +L A + F E D+
Sbjct: 8 SSWMFMLLKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILL 67
Query: 281 WTAMVSGYVQNGKVDEA-RMIFD---AMPEKNTVSWNAMIAGYVQTKRMDMAREL----F 332
W A++ GY Q VD RM D + N ++ ++ T + +++ F
Sbjct: 68 WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 127
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+ NV N++++ YA+ G+I++AR +FD++ +SW +II+GY Q+G ++L
Sbjct: 128 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 187
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
+F EM++ + + SV++ N+ L GK +HG + K+G E + +L MY
Sbjct: 188 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA 247
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
K G VE A F + ++I WN MI+GYA +G+G++A+ LF M T I+ D ITM
Sbjct: 248 KRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRS 307
Query: 513 ILSACSHTGLVE---------KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+ A + G +E +EY RD + T ++D+ + G + A+
Sbjct: 308 AVLASAQVGSLELARWLDGYISKSEY-----RDDTFVN-----TGLIDMYAKCGSIYLAR 357
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ + + D W ++ L+G + A
Sbjct: 358 CVFDRVA-DKDVVLWSVMIMGYGLHGHGQEA 387
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 156/391 (39%), Gaps = 87/391 (22%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD-- 153
N+++S Y GQ+ AR VFD++ R +VSW +ISGYV+N A N+F+ M + +
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 198
Query: 154 ----------------------------------------VVSWNTMLSGYAQNGYADAA 173
V+S TM YA+ G + A
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM---YAKRGLVEVA 255
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQ 229
R F+RM + N I WN +++ Y NG EEA LF + ++ S + +
Sbjct: 256 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 315
Query: 230 KRLGDAKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
L A+W+ + RD+ NT +I YA+ + A+ +F+ KDV W+ M+
Sbjct: 316 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 375
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
GY +G EA +++ M +A C N ++
Sbjct: 376 MGYGLHGHGQEAICLYNEMK---------------------------QAGVCPNDGTFIG 408
Query: 346 MITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
++T SG + LF MP H ++ ++ ++GY + + M
Sbjct: 409 LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI-- 466
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+ S + ++LS C + LG+ QL
Sbjct: 467 -KPGVSVWGALLSACKIHRKVRLGEIAAEQL 496
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 180/426 (42%), Gaps = 65/426 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N ++ + + G A VF+ + R+ VS+ ++ISGY+ NG A VF +M Q ++
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 198
Query: 124 VSWNVMIS--------------------------------------GYVRNKSLSAARNL 145
W ++S Y + + AR
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 258
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRI 201
F M K +++ WN M+SGYA NGY + A ++F M+ KN I+ + A Q G +
Sbjct: 259 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 318
Query: 202 EEACML--FESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
E A L + SK+ + ++ L+ + K + A+ +FDR+ +D V W+ MI GY
Sbjct: 319 ELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGY 378
Query: 258 AQNNYLAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMP----EKNT 309
+ + EA L+ E V T+ +++ +G V E +F MP E +
Sbjct: 379 GLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHH 438
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG-----YAQSGEITHARNLF 363
++ ++ + ++ A + +M K V+ W +++ + GEI A LF
Sbjct: 439 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIA-AEQLF 497
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
P ++ + + YA + + + M + G LN+ S + NL + +
Sbjct: 498 ILDP-YNTGHYVQLSNLYASAHLWTRVANVRLMMTQKG--LNKDLGHSSIEINGNLETFQ 554
Query: 424 LGKQLH 429
+G + H
Sbjct: 555 VGDRSH 560
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/695 (36%), Positives = 379/695 (54%), Gaps = 45/695 (6%)
Query: 100 SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
+G L G+L AR V N +I+ Y L++A LF MP+R+ VSW T
Sbjct: 33 AGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTT 92
Query: 160 MLSGYAQNGYADAARRIFDRMLEKN--------EISWNGLLAAYVQNGRIEEACMLFESK 211
++SG +QN A F M + A + C+
Sbjct: 93 LVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLG 152
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+ E+ ++L + K L +A +FD+MP +D V+W MI GYA+N L A F
Sbjct: 153 FDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFR 212
Query: 272 E-------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
+ + VF SG +++G + + ++ AG+
Sbjct: 213 DMKREGLVGADQHVFCSVLSASGGLKDGWLSK------------SIHCCVTKAGF----- 255
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH-DCISWAAIIAGYAQ 383
EL VA N +I YA+S ++ A + P + +S ++I GY +
Sbjct: 256 -----EL-------EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIE 303
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+ E++L +++E++R G N F+S++ CA A LE G QLH Q++K FV
Sbjct: 304 TDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFV 363
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
G+ L+ MY KCG + + F EI + I+WN +I +A+HG G++A+ F+ M GI
Sbjct: 364 GSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGI 423
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ I V +L+ACSH GLV++G +YFYSM +G+ P +HY+C++D GRAGRLDEA
Sbjct: 424 RPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAY 483
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ MP +P+A W +LLGACR+ G EL E AA+ + ++EP N G++V LS +YA+ G
Sbjct: 484 KFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLG 543
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W DV VR MRD +KK+ G+SW++ K H F D HP++ IY LEEL ++K
Sbjct: 544 QWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIK 603
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
++G++ T + ++ + KE +LRYHSE++AVA+ ++S+PA +PI V KNLR+C DCH
Sbjct: 604 EEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHT 663
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A K I K+ R II+RDN+RFHHF G CSCGDYW
Sbjct: 664 AFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 197/478 (41%), Gaps = 77/478 (16%)
Query: 72 MRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMIS 131
+R G A V + S+ N +I+ Y L A ++F MP+R+ VSW ++S
Sbjct: 36 LRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVS 95
Query: 132 GYVRNKSLSAARNLFEMM------PKR--------------------------------- 152
G +N + A F M P R
Sbjct: 96 GLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDT 155
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
++ + + Y++ G A R+FD+M +K+ ++W ++ Y +NG +E A + F
Sbjct: 156 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 215
Query: 213 NWEVVSWN--------SLMGGFVKQKRLGDAKWIFDRMPVRDEVSW-NTMITGYAQNNYL 263
+V + S GG + EV+ N +I YA++ +
Sbjct: 216 REGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDV 275
Query: 264 AEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAG 318
A R+ + P +V + T+M+ GY++ V+EA +I+ + E N ++++MI G
Sbjct: 276 ESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKG 335
Query: 319 -------------YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+ Q + D+ R+ F +T++ Y + G I+ + LF+
Sbjct: 336 CAMQALLEQGAQLHAQVIKTDLIRDSFVG---------STLVDMYGKCGLISLSMQLFNE 386
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
+ I+W A+I +AQ G+ ++++ F M G R N F S+L+ C++ ++ G
Sbjct: 387 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG 446
Query: 426 -KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
K + G E + ++ Y + G ++EAY E+ + + W +++
Sbjct: 447 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 504
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 165/381 (43%), Gaps = 43/381 (11%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
+ G A VF+ MP++ +V++ AMI GY NG L+ A F M + LV +
Sbjct: 169 KCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGAD----Q 224
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
+V LSA+ L + + + T + G+ E N L+
Sbjct: 225 HVFCSVLSASGGLKDGWLSKSIHCCVT------KAGF------------ELEVAVRNALI 266
Query: 193 AAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DE 247
Y ++ +E A + + W VVS S++ G+++ + +A I+ + + +E
Sbjct: 267 DMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNE 326
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
++++MI G A L + +L + ++D F + +V Y + G + + +F+
Sbjct: 327 FTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 386
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHA 359
+ + ++WNA+I + Q A + F+ M + ++ +++T + +G +
Sbjct: 387 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG 446
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
F M + I ++ II Y ++G +++ + EM + N + S+L
Sbjct: 447 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPI---KPNAYGWCSLLG 503
Query: 415 TCANLASLELGKQLHGQLVKV 435
C S ELG+ L+K+
Sbjct: 504 ACRMRGSKELGEVAAQNLMKL 524
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 155/363 (42%), Gaps = 35/363 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMI-------SGYLLNGQLDPAR 112
D W I + +NG ++A+ F M R V + + SG L +G L +
Sbjct: 187 DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSI 246
Query: 113 Q--VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-DVVSWNTMLSGYAQNGY 169
V + ++ N +I Y ++ + +A + ++ P +VVS +M+ GY +
Sbjct: 247 HCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDC 306
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS----WNS 221
+ A I+ + +E NE +++ ++ +E+ L +++ ++
Sbjct: 307 VEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST 366
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--- 278
L+ + K + + +F+ + R +++WN +I +AQ+ + EA + F+ +
Sbjct: 367 LVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPN 426
Query: 279 -FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
+ ++++ G VDE F +M E + + ++ +I Y + R+D A +
Sbjct: 427 HIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFI 486
Query: 333 EAMTCK-NVASWNTMI-----TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
M K N W +++ G + GE+ A+NL P + I ++ YA G
Sbjct: 487 SEMPIKPNAYGWCSLLGACRMRGSKELGEVA-AQNLMKLEPGNTGIH-VSLSGIYASLGQ 544
Query: 387 SED 389
ED
Sbjct: 545 WED 547
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 278/829 (33%), Positives = 428/829 (51%), Gaps = 146/829 (17%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
WN I+ + + G A +F SM R + ++ ++++ +P ++ +Q+
Sbjct: 174 WNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTAC--SLTEPDVRLLEQIM 231
Query: 120 --------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
DL + ++S + ++ SL AR +F M R+ V+ N ++ G + + +
Sbjct: 232 CTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 172 AARRIF---DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW--------- 219
A ++F + M++ + S+ LL+++ + EE + + + V++
Sbjct: 292 EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGI 351
Query: 220 -NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------ 272
N L+ + K + DA+ +F M +D VSWN+MITG QN+ EA ++
Sbjct: 352 GNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEI 411
Query: 273 --------------APVK-------------------DVFTWTAMVSGYVQNGKVDEARM 299
A +K +V A+++ Y + G ++E R
Sbjct: 412 LPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRK 471
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC---------------------- 337
IF +MPE + VSWN++I ++R L EA+ C
Sbjct: 472 IFSSMPEHDQVSWNSIIGALASSER-----SLPEAVACFLNALRAGQKLNRITFSSVLSA 526
Query: 338 -------------------KNVA----SWNTMITGYAQSGEITHARNLFDRMPQH-DCIS 373
N+A + N +I Y + GE+ +F RM + D ++
Sbjct: 527 VSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVT 586
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W ++I+GY + +L L M + G+RL+ + +VLS A++A+LE G ++H V
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+ E+ VG+AL+ MY KCG ++ A F NTM
Sbjct: 647 RACLESDVVVGSALVDMYSKCGRLDYALRFF-----------NTMP-------------- 681
Query: 494 LFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
LF +MK G PD +T VG+LSACSH GL+E+G ++F SM+ YG+ P +H++CM DL
Sbjct: 682 LFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADL 741
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC-RLYG-KTELAEKAAEVIFEMEPENAG 610
LGRAG LD+ ++ ++ MP +P+ W +LGAC R G K EL +KAAE++F++EPENA
Sbjct: 742 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAV 801
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YVLL N+YAA GRW D+ K R KM+D VKK GYSW+ +++ VH F GD HP+ D
Sbjct: 802 NYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADV 861
Query: 671 IYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR-PI 729
IY L+EL K++ G+V T L+D+ +E KE +L YHSEKLAVA+ + + + PI
Sbjct: 862 IYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPI 921
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+MKNLRVC DCH+A KHISKI GR IILRD+NRFHHF G CSC D+W
Sbjct: 922 RIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSDFW 970
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 176/678 (25%), Positives = 268/678 (39%), Gaps = 185/678 (27%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS----------------- 138
N +I+ YL G AR+VFD+MP R+ VSW ++SGY RN
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVF 99
Query: 139 ------LSAARN------------------LFEMMPKRDVVSWNTMLSGYAQ-NGYADAA 173
+SA R LF++ D V N ++S Y + G A
Sbjct: 100 SNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYA 159
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGR--------------------------IEEACML 207
R FD + KN +SWN +++ Y Q G + AC L
Sbjct: 160 LRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSL 219
Query: 208 FESKANW---------------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
E ++ + L+ F K L A+ IF++M R+ V+ N
Sbjct: 220 TEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNG 279
Query: 253 MITGYAQNNYLAEAQRLF---------------------------EEAPVKD-------- 277
++ G + + EA +LF EE +K
Sbjct: 280 LMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHV 339
Query: 278 ---------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
V +V+ Y + G + +AR +F M EK++VSWN+MI G Q A
Sbjct: 340 ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEA 399
Query: 329 RELFEAM-----------------TCK----------------------NVASWNTMITG 349
E +++M +C NV+ N ++T
Sbjct: 400 VERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS-EDSLRLFIEMKRYGERLNRSP 408
YA++G + R +F MP+HD +SW +II A S S +++ F+ R G++LNR
Sbjct: 460 YAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRIT 519
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F+SVLS ++L+ ELGKQ+HG +K NAL+ Y KCG ++ F +
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMS 579
Query: 469 D-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+ +D ++WN+MI+GY + AL L M G + D +LSA + +E+G
Sbjct: 580 ERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGM 639
Query: 528 EYFYSMNR---DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF----------EPD 574
E R + V+ S +VD+ + GRLD A MP PD
Sbjct: 640 EVHACSVRACLESDVVVGSA----LVDMYSKCGRLDYALRFFNTMPLFANMKLDGQTPPD 695
Query: 575 AATWGALLGACRLYGKTE 592
T+ +L AC G E
Sbjct: 696 HVTFVGVLSACSHAGLLE 713
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 223/467 (47%), Gaps = 42/467 (8%)
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
++DV N +++ Y + G + +AR++FD M +N +SW +++ Y +NG +EA +
Sbjct: 33 EKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRD 92
Query: 211 KANWEVVSWN-SLMGGFVKQKRLGDAKWIFDRMP---------VRDEVSWNTMITGYAQ- 259
V S + + + + L +F R D V N +I+ Y +
Sbjct: 93 MVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKC 152
Query: 260 NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAM 315
L A R F++ VK+ +W +++S Y Q G A +F +M ++ ++
Sbjct: 153 GGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSL 212
Query: 316 IAGYVQTKRMDMARELFEAMTC--------KNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ D+ L E + C ++ + +++ +A+SG + HAR +F++M
Sbjct: 213 VTTACSLTEPDV--RLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQME 270
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL-------STCANLA 420
+ ++ ++ G + + E++ +LF++M ++ SP + V+ + A
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMN---SMIDVSPESYVILLSSFPEYSLAEEV 327
Query: 421 SLELGKQLHGQLVKVG---FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L+ G+++HG ++ G F G +GN L+ MY KCGS+ +A F + +KD +SWN+
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVG--IGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNS 385
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI G ++ +A+ ++SM+ I P T++ +S+C+ + G + + +
Sbjct: 386 MITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQ-IHGESLKL 444
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G+ N ++ L G L+E + + +MP E D +W +++GA
Sbjct: 445 GIDLNVSVSNALMTLYAETGCLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/588 (23%), Positives = 244/588 (41%), Gaps = 113/588 (19%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
++D+ N +I+ Y+ +AR +F+ MP R+ VSW ++SGY++NG A
Sbjct: 33 EKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRD 92
Query: 180 MLEK----------------NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
M+++ E+ G+L +G +LF+ + V N L+
Sbjct: 93 MVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHG------LLFKLSYAVDAVVSNVLI 146
Query: 224 GGFVK-QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN--------------------- 261
+ K LG A FD + V++ VSWN++I+ Y+Q
Sbjct: 147 SMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTE 206
Query: 262 -----------YLAEAQ-RLFEE--------APVKDVFTWTAMVSGYVQNGKVDEARMIF 301
L E RL E+ + D+F + +VS + ++G + AR IF
Sbjct: 207 YTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIF 266
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----------------------- 338
+ M +N V+ N ++ G V+ K + A +LF M
Sbjct: 267 NQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEE 326
Query: 339 ---------------------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
V N ++ YA+ G I AR +F M + D +SW ++
Sbjct: 327 VGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSM 386
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I G Q+ +++ + M+R+ S +S+CA+L +LG+Q+HG+ +K+G
Sbjct: 387 ITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGI 446
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG-KDALMLFE 496
+ V NAL+ +Y + G + E F + + D +SWN++I A +A+ F
Sbjct: 447 DLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFL 506
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
+ G K + IT +LSA S E G + + + Y + + ++ G+
Sbjct: 507 NALRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKYNIADEATTENALIACYGKC 565
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
G +D + + M D TW +++ Y EL KA ++++ M
Sbjct: 566 GEMDGCEKIFSRMSERRDDVTWNSMISG---YIHNELLAKALDLVWFM 610
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 147/288 (51%), Gaps = 17/288 (5%)
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
K+V N +I Y ++G+ AR +FD MP +C+SWA +++GY+++G +++L +M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDM 93
Query: 398 KRYGERLNRSPFTSVLSTCANLASLEL--GKQLHGQLVKVGFEAGCFVGNALLVMYCKC- 454
+ G N F S L C L S+ + G+Q+HG L K+ + V N L+ MY KC
Sbjct: 94 VKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCG 153
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GS+ A AF+++ K+ +SWN++I+ Y++ G + A +F SM+ G +P + T ++
Sbjct: 154 GSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLV 213
Query: 515 -SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
+ACS T + E + G + + + +V ++G L A+ + M
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRN 273
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEM------EPENAGMYVLL 615
G ++G R + E+A ++ +M PE+ YV+L
Sbjct: 274 AVTLNGLMVGLVR----QKWGEEATKLFMDMNSMIDVSPES---YVIL 314
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 166/370 (44%), Gaps = 63/370 (17%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--- 324
RL++ KDV+ +++ Y++ G AR +FD MP +N VSW +++GY +
Sbjct: 26 RLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKE 85
Query: 325 -----MDMARE---------------------------------LFEAMTCKNVASWNTM 346
DM +E LF+ + N +
Sbjct: 86 ALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVL 145
Query: 347 ITGYAQ-SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
I+ Y + G + +A FD + + +SW +II+ Y+Q+G + ++F M+ G R
Sbjct: 146 ISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPT 205
Query: 406 RSPFTSVLSTCANLA--SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
F S+++T +L + L +Q+ + K GF FVG+ L+ + K GS+ A
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKI 265
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F ++ ++ ++ N ++ G R +G++A LF M + + + P+ + V +LS+ L
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSL 323
Query: 523 VE-----KGTE----YFYSMNRDYGV-IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
E KG E + D+ V I N +V++ + G + +A+ + M E
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNG-----LVNMYAKCGSIADARRVFCFMT-E 377
Query: 573 PDAATWGALL 582
D+ +W +++
Sbjct: 378 KDSVSWNSMI 387
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/395 (19%), Positives = 158/395 (40%), Gaps = 74/395 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----------SSVS--------------- 94
D WN IT +N C A+ + SM R SS+S
Sbjct: 379 DSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIH 438
Query: 95 --------------YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN---- 136
NA+++ Y G L+ R++F MP+ D VSWN +I +
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSL 498
Query: 137 -KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGL 191
++++ N K + ++++++LS + + + ++I L+ N + N L
Sbjct: 499 PEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENAL 558
Query: 192 LAAYVQNGRIEEACMLFESKAN-WEVVSWNSLMGGFVKQKRLG---DAKWIFDRMPVR-D 246
+A Y + G ++ +F + + V+WNS++ G++ + L D W + R D
Sbjct: 559 IACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLD 618
Query: 247 EVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ T+++ +A L + DV +A+V Y + G++D A F+
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 303 AMP-----------EKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTM 346
MP + V++ +++ ++ + FE+M+ + ++ M
Sbjct: 679 TMPLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCM 738
Query: 347 ITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
++GE+ + ++MP + + + W ++
Sbjct: 739 ADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 773
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
K H +L K G E ++ N L+ Y + G A F+E+ ++ +SW +++GY+R
Sbjct: 20 AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSR 79
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+G K+AL+ M G+ + V L AC
Sbjct: 80 NGEHKEALVFLRDMVKEGVFSNHYAFVSALRAC 112
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 338/533 (63%), Gaps = 1/533 (0%)
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR-IEEACMLFES 210
R +V N ++ A+ G AARR+FD M ++ +SWN LL A + GR + A LF+
Sbjct: 14 RLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDD 73
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+ V+SWNS++ G + L A F R P R+ SWN M+ G + + +A+ LF
Sbjct: 74 MPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLF 133
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
++ P ++V ++T MV G + G+V AR +FDAMP +N VSW AMI+GYV ++ AR+
Sbjct: 134 DQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARK 193
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
LFEAM KNV + MITGY + G++ +AR LFD + D ISW AII+GY +G E++
Sbjct: 194 LFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEA 253
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
+L+I M R G + +++ ++L+ C++LA L G+ H ++K E+ + NAL+ M
Sbjct: 254 TKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTM 313
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG+V+E+ F + +D++SWNT+IA YA+HG + + LF M+ G+ P+DIT
Sbjct: 314 YSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITF 373
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+ +LSAC H G V++ + F M Y + P ++HY C+VD+L RAG+L++A + +K MP
Sbjct: 374 LSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMP 433
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
E + WG LL A + +G +L E AA+++ + E++G YV+LSN+YAA+G WG+V++
Sbjct: 434 SEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNR 493
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
VR +M+++GVKK G+SW E+ +KVH F GD HPE D I + L ++ F ++
Sbjct: 494 VRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEMDMILSELRKISFHMQ 546
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 222/441 (50%), Gaps = 46/441 (10%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR-NKSLSAARNLFEM 148
R V N I+ G + AR+VFD MP+RD VSWN +++ R + L AAR+LF+
Sbjct: 14 RLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDD 73
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
MP R+V+SWN++++G +G AA F R +N SWN +LA V+ G +E+A LF
Sbjct: 74 MPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLF 133
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
+ VVS+ +++ G + + A+ +FD MP R+ VSW MI+GY NN L EA++
Sbjct: 134 DQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARK 193
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
LFE P K+V TAM++GY + G + AR +FD + K+ +SWNA+I+GYV + A
Sbjct: 194 LFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEA 253
Query: 329 RELF---------------------------------------EAMTCKNVASWNTMITG 349
+L+ +AM +++ N ++T
Sbjct: 254 TKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTM 313
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y++ G + + +F + D +SW IIA YAQ G + + LF EM+ G N F
Sbjct: 314 YSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITF 373
Query: 410 TSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI- 467
S+LS C + ++ +L + K ++ + + G +E+A +E+
Sbjct: 374 LSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMP 433
Query: 468 --VDKDVISWNTMIAGYARHG 486
+K+V W T++ HG
Sbjct: 434 SEAEKNV--WGTLLCASQTHG 452
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 195/349 (55%), Gaps = 15/349 (4%)
Query: 60 DIRQWNVAITTHMRNG-CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
D WN +T R G +A +F+ MP R+ +S+N++I+G L +G L A F +
Sbjct: 46 DAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARA 105
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P+R++ SWN M++G VR S+ AR+LF+ MP+R+VVS+ TM+ G A+ G +AR +FD
Sbjct: 106 PRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFD 165
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
M +N +SW +++ YV N +EEA LFE+ VV+ +++ G+ K+ L +A+ +
Sbjct: 166 AMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRL 225
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVS-----GYV 289
FD + +D +SWN +I+GY N EA +L+ E D T A+++ +
Sbjct: 226 FDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALL 285
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG 349
+ G+ A ++ AM E + NA++ Y + +D + +F ++ +++ SWNT+I
Sbjct: 286 RQGRSTHA-VVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAA 344
Query: 350 YAQSGEITHARNLFDRMPQ----HDCISWAAIIAGYAQSGYSEDSLRLF 394
YAQ G LF M + I++ ++++ +G ++SL+LF
Sbjct: 345 YAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLF 393
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/436 (49%), Positives = 292/436 (66%), Gaps = 4/436 (0%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y ++ AR LFDR+P+H+ W +I GYA +G E +++L+ +M YG +
Sbjct: 116 LVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPD 175
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
F VL CA L+++E G+++H +V+ G+E FVG AL+ MY KCG V A F+
Sbjct: 176 NFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFD 235
Query: 466 EIVDKD---VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
+I+ +D V+SWN MI GYA HG +AL LFE M V KPD IT VG+LSACSH GL
Sbjct: 236 KILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGL 294
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+E+G +F +M RDY + P +HYTCMVDLLG +GRLDEA NL+ M PD+ WGALL
Sbjct: 295 LEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALL 354
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
+C+++ EL E A E + E+EP++AG YV+LSN+YA +G+W V+K+R M DR +KK
Sbjct: 355 NSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKK 414
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
SW+EV+NKVH F GDT HP D IY+ LE + +K+ G+ ST V HDV ++E
Sbjct: 415 SIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDE 474
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
K +M+ HSE+LA+A+G++S P G + + KNLR+CEDCH AIK ISKI R I +RD N
Sbjct: 475 KANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVN 534
Query: 763 RFHHFSGGSCSCGDYW 778
R+HHF G CSCGDYW
Sbjct: 535 RYHHFKDGVCSCGDYW 550
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 157/353 (44%), Gaps = 31/353 (8%)
Query: 70 THMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVS 125
TH++ S H ++ + +Y +++ + + P +Q+ Q+ D V
Sbjct: 53 THLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVI 112
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI----FDRML 181
+++ Y SLS+AR LF+ +PK ++ WN ++ GYA NG +AA ++ FD L
Sbjct: 113 ATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGL 172
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFES--KANWE--VVSWNSLMGGFVKQKRLGDAKW 237
+ ++ +L A IE + E + WE V +L+ + K +G A+
Sbjct: 173 VPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSARE 232
Query: 238 IFDRMPVRDE---VSWNTMITGYAQNNYLAEAQRLFEE---APVKDVFTWTAMVSGYVQN 291
+FD++ VRD VSWN MITGYA + + EA LFEE D T+ ++S
Sbjct: 233 VFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHG 292
Query: 292 GKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNT 345
G ++E M F+ M + + M+ + R+D A L M + W
Sbjct: 293 GLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGA 352
Query: 346 M-----ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ I + GEI R L + P D ++ + YAQ+G E +L
Sbjct: 353 LLNSCKIHANVELGEIALER-LIELEPD-DAGNYVILSNIYAQAGKWEGVAKL 403
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 42/275 (15%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S + S+L +C +++ GKQLH Q+ GF + L+ +YC C S+ A F+
Sbjct: 76 SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I ++ WN +I GYA +G + A+ L+ M G+ PD+ T +L AC+ +E G
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 527 TEY------------------FYSMNRDYGVIPNSKH---------------YTCMVDLL 553
E M G + +++ + M+
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGY 255
Query: 554 GRAGRLDEAQNLMKNM--PFEPDAATWGALLGACRLYGKTELAEKAAEVI---FEMEPEN 608
G EA +L + M +PD T+ +L AC G E E + ++++P
Sbjct: 256 AMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDP-T 314
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMR---DRGV 640
Y + +L SGR + + ++M+ D GV
Sbjct: 315 VQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGV 349
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 61/290 (21%)
Query: 64 WNVAITTHMRNGCC-----DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
++ I T + N C SA +F+ +P+ + +N +I GY NG + A Q++ QM
Sbjct: 108 FDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQM 167
Query: 119 PQRDLVSWN---------------------------------------VMISGYVRNKSL 139
LV N +I Y + +
Sbjct: 168 FDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCV 227
Query: 140 SAARNLFEMMPKRD---VVSWNTMLSGYAQNGYADAARRIFD---RMLEKNEISWNGLLA 193
+AR +F+ + RD VVSWN M++GYA +G+A A +F+ R+ + + I++ G+L+
Sbjct: 228 GSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLS 287
Query: 194 AYVQNGRIEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDE 247
A G +EE M FE+ K + V + ++ RL +A + +M V D
Sbjct: 288 ACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDS 347
Query: 248 VSWNTMITG--YAQNNYLAEA--QRLFEEAPVKDVFTWTAMVSGYVQNGK 293
W ++ N L E +RL E P D + + + Y Q GK
Sbjct: 348 GVWGALLNSCKIHANVELGEIALERLIELEP-DDAGNYVILSNIYAQAGK 396
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 271/753 (35%), Positives = 397/753 (52%), Gaps = 76/753 (10%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN-----KSLSAARNLF--EM 148
A++ Y G ++ A +VF ++ DL+ WN I N ++L R ++ +
Sbjct: 170 TALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGL 229
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEA 204
+P R S+ +LS + AR I R+ E + + L+ Y + G ++E+
Sbjct: 230 LPNR--ASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDES 287
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQN 260
+FE+ A VSWN+++ F + A I+ RM +++++ T + +
Sbjct: 288 IAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 347
Query: 261 NYLAEAQRLFEEAPVK----------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+ +Q L E A + DV TA+V+ Y G +D AR FDA+P KN V
Sbjct: 348 S----SQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 403
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASW---------- 343
SWNAM+ Y R A ELF AM C++V+
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGN 463
Query: 344 ----------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
N ++ +A+SG + A FD D +SW +A + ++
Sbjct: 464 GLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITA 523
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYC 452
F M+ G R ++ SV+ CA+L +LELG+ + QL + E V +A++ M
Sbjct: 524 FYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVA 583
Query: 453 KCGS-VEEAYHAFEEIVD--KDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDI 508
KCGS V+E F + D KD+++WNTMIA YA+HG G+ AL LF M+ ++PD
Sbjct: 584 KCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSS 643
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS-KHYTCMVDLLGRAGRLDEAQNLMK 567
T V +LS CSH GLVE G F+ G+ +HY C+VD+LGR G L EA++ ++
Sbjct: 644 TFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIR 703
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP D+ W +LLGAC YG E E+AA E+ ++ YV+LSN+YAA+GRW D
Sbjct: 704 KMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWED 763
Query: 628 VSKVRLKMRDRGVKK-VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+VR M +R VKK G S + V+N+VH F D HP+ D IYA LE L+ +++ G
Sbjct: 764 SIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLIREAG 823
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T+LVLHDV EE+KE +L YHSEKLA+A+G++S+P IRV+KNLRVC+DCH A K
Sbjct: 824 YVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATK 883
Query: 747 HISKIVGRLIILRDNNRFHHFS-GGSCSCGDYW 778
I+++ R I +RD NRFHHF G CSCGDYW
Sbjct: 884 FIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 231/544 (42%), Gaps = 73/544 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ +T + R G D ++ VF +M R+ VS+NAMI+ + G A ++ +M
Sbjct: 267 DVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ 326
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----------KRDVVSWNTMLSGYAQNGY 169
Q + ++ S++++L E + DV+ +++ Y G
Sbjct: 327 QEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGA 386
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGG 225
D AR FD + KN +SWN +L AY NGR EA LF + + VS+ +++G
Sbjct: 387 IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGC 446
Query: 226 F--VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
V + R A+ + + + ++ N ++ +A++ L EA F+ VKD +W
Sbjct: 447 CEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNT 506
Query: 284 MVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
V+ + A F M P+K T+ + + T +++ R + + ++
Sbjct: 507 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGT--LELGRSIQQQLSA 564
Query: 338 -----KNVASWNTMITGYAQSG-EITHARNLFDRMP--QHDCISWAAIIAGYAQSGYSED 389
++V + ++ A+ G + LF RMP + D ++W +IA YAQ G+
Sbjct: 565 AIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRK 624
Query: 390 SLRLF-IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+L+LF I +R R + S F SVLS C+ H LV+ G F+ +L
Sbjct: 625 ALKLFRIMQQRSSVRPDSSTFVSVLSGCS-----------HAGLVEDGIHC-FFLAREVL 672
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
I + V + ++ R G+ ++A M + D +
Sbjct: 673 -----------------GIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMP---LPADSV 712
Query: 509 TMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+L ACS G +E G F + R +S Y + ++ AGR +++ +
Sbjct: 713 VWTSLLGACSSYGDLEGGERAARAFIELYRS-----DSVGYVVLSNIYAAAGRWEDSIRV 767
Query: 566 MKNM 569
++M
Sbjct: 768 REDM 771
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 198/470 (42%), Gaps = 66/470 (14%)
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
R+I + L +N++ N L+ Y + +++A F + + + +WN+L+ +
Sbjct: 48 RQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVF 107
Query: 234 DAKWIFDRMPVRDEVS-----------WNTMITGYAQNNYLAEAQRLFEEAPVK------ 276
D ++ RM + + + +G ++ + AQ ++
Sbjct: 108 D---LYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLER 164
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI-AGYVQTKRMDMARELFEAM 335
D+F TA++ Y + G V+ A +F + + + WNA I A +R D A L M
Sbjct: 165 DLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRM 224
Query: 336 -----------------TC----------------------KNVASWNTMITGYAQSGEI 356
+C +V ++T Y + G +
Sbjct: 225 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 284
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+ +F+ M + +SW A+IA +AQ G+ + ++ M++ G R N+ F + L
Sbjct: 285 DESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 344
Query: 417 ANLASLELGKQ--LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
+ +S +LG+ LHG + G E VG AL+ MY G+++ A AF+ I K+++S
Sbjct: 345 CSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVS 404
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WN M+ Y +G ++A+ LF +MK + P+ ++ + +L C V + +
Sbjct: 405 WNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVV 461
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+ S +V + R+G L+EA + D+ +W + A
Sbjct: 462 GNGLFAQESSIANGVVRMFARSGSLEEAMAAF-DATVVKDSVSWNTKVAA 510
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 25/225 (11%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+L C A L G+QLH Q+VK G +GN L+ MY KC S+++A AF +
Sbjct: 27 LAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALR 86
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ + +WNT+IA + D + + +P+ +T++ +L G + G
Sbjct: 87 SRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVL------GAIASGDP 140
Query: 529 YFYSMNRDYGVIPNSK-----------HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
S +R I + T ++D G+ G ++ A + + PD
Sbjct: 141 SSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDLIC 199
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSN 617
W A + AC G E ++A ++ M P A +LS+
Sbjct: 200 WNAAIMAC--AGNDERPDRALLLVRRMWLEGLLPNRASFVAILSS 242
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-----SYNAMISGYLLNGQLD 109
P D+ WN I + ++G AL +F M +RSSV ++ +++SG G ++
Sbjct: 600 PDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVE 659
Query: 110 P-------ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTML 161
AR+V + Q+ + + ++ R L A + MP D V W ++L
Sbjct: 660 DGIHCFFLAREVLG-IEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLL 718
Query: 162 ---SGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
S Y + A R F + + + + L Y GR E++ + E A V
Sbjct: 719 GACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRV 776
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/520 (41%), Positives = 327/520 (62%), Gaps = 20/520 (3%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
++ T +V Y + G +++AR + D MPE+N VSW AMI+GY Q +R D A ELF M
Sbjct: 70 LYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLR 129
Query: 336 ----TCKNVASW-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
K V ++ ++++ YA+S I AR +FD +P D +S+ AI+
Sbjct: 130 AGIHQVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAIL 189
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+GY Q G E++L LF + G + N+ FT++L+ + L+S++ GKQ+HG +++
Sbjct: 190 SGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELP 249
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+ N+L+ MY KCG + + F+ + ++ V+SWN M+ GY RHG + + LF SM
Sbjct: 250 FFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM 309
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
+KPD +T++ +LS SH GLV++G + F + ++ + N++HY C++DLLGR+G+
Sbjct: 310 CD-EVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQ 368
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L +A NL++ MPF+P A WG+LLGACR++ + E A+ + ++EPENAG YV+LSN+
Sbjct: 369 LQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNI 428
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
YAA+G W DV +VR M + V K G SW+ + +HTF + HP K+ I A ++E+
Sbjct: 429 YAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEI 488
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
+K GFV VLHDV +E+KE ML HSEKLA+ +G++S P+ I+VMKNLR+C
Sbjct: 489 YVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRIC 548
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCHN K +SK+ GR I LRD NRFH + G+C+CGDYW
Sbjct: 549 VDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 154/332 (46%), Gaps = 60/332 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL---- 123
+ + R G + A +V + MP R+ VS+ AMISGY N + D A ++F M + +
Sbjct: 77 VIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVK 136
Query: 124 ------VSWNV---------MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
V N ++ Y +++++ AR +F+M+P RDVVS+ +LSGY Q G
Sbjct: 137 QVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLG 196
Query: 169 YADAA----RRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWN 220
+ A R +++ ++ N++++ LL A ++ ++ + + + N
Sbjct: 197 LDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQN 256
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPV 275
SL+ + K +L ++ +FD MP R VSWN M+ GY ++ E +LF E P
Sbjct: 257 SLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEVKP- 315
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
D T A++SGY G VDE +FD + ++ +
Sbjct: 316 -DSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQS-------------------------- 348
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
T N + +I +SG++ A NL ++MP
Sbjct: 349 TLLNTEHYGCVIDLLGRSGQLQKALNLIEKMP 380
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 139/279 (49%), Gaps = 27/279 (9%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
++ Y R +L ARN+ + MP+R+VVSW M+SGY+QN D A +F ML
Sbjct: 76 LVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLR------ 129
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRD 246
A Q ++ F K N+E+ + +SL+ + K + + +A+ +FD +P RD
Sbjct: 130 ----AGIHQVKQVHA----FAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARD 181
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
VS+ +++GY Q EA LF E + T+TA+++ +D + +
Sbjct: 182 VVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHG 241
Query: 303 AMPEKNTVSW----NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
+ + + N++I Y + ++ +R +F++M ++V SWN M+ GY + G
Sbjct: 242 LILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHE 301
Query: 359 ARNLFDRM---PQHDCISWAAIIAGYAQSGYSEDSLRLF 394
LF M + D ++ A+++GY+ G ++ L +F
Sbjct: 302 VVQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDEGLDMF 340
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 121/235 (51%), Gaps = 29/235 (12%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
L+ Y + G +E+A + + VVSW +++ G+ + +R D W M +R +
Sbjct: 76 LVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNER-PDQAWELFIMMLRAGIHQ 134
Query: 251 --------------------NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
++++ YA++ + EA+R+F+ P +DV ++TA++SGY Q
Sbjct: 135 VKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQ 194
Query: 291 NGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----AS 342
G +EA R++++ + N V++ A++ MD +++ + + + A
Sbjct: 195 LGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMAL 254
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
N++I Y++ G++ ++R +FD MP+ +SW A++ GY + G + + ++LF M
Sbjct: 255 QNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM 309
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM---PKR 152
N++I Y G+L +R+VFD MP+R +VSWN M+ GY R+ LF M K
Sbjct: 256 NSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEVKP 315
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK-----NEISWNGLLAAYVQNGRIEEACML 207
D V+ +LSGY+ G D +FD ++++ N + ++ ++G++++A L
Sbjct: 316 DSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNL 375
Query: 208 FE------SKANWEV------VSWNSLMGGFVKQKRL 232
E ++A W V N +G FV QK L
Sbjct: 376 IEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLL 412
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 153/354 (43%), Gaps = 37/354 (10%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ ++ C +L G+Q+H ++V G+ ++ L++MY +CG++E+A + + +
Sbjct: 38 YDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMP 97
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL------ 522
+++V+SW MI+GY+++ A LF M GI + V + ++ L
Sbjct: 98 ERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIH--QVKQVHAFAVKTNFELHMFVGS 155
Query: 523 ----VEKGTEYFYSMNRDYGVIP--NSKHYTCMVDLLGRAGRLDEAQNLMK---NMPFEP 573
+ +E R + ++P + YT ++ + G +EA +L + N +
Sbjct: 156 SLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQC 215
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEME-PENAGMYVLLSNLYAASGRWGDVSKVR 632
+ T+ ALL A + ++ +I E P + L ++Y+ G+ +V
Sbjct: 216 NQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVF 275
Query: 633 LKMRDRGV----KKVTGYSWLEVQNKVHTF--SVGDTLHPEKDRIYAYLEELEFKLKQDG 686
M +R V + GY + ++V S+ D + P+ + A L G
Sbjct: 276 DSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEVKPDSVTLLAVLS---------G 326
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA-YGILSIPAGRPIRVMKNLRVCE 739
+ + L D G + +H+++ S L YG + GR ++ K L + E
Sbjct: 327 YSHGG---LVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIE 377
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSM---PRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ WN + + R+G + +F SM + SV+ A++SGY G +D +FD
Sbjct: 283 VVSWNAMLMGYGRHGLAHEVVQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDH 342
Query: 118 MPQRDLVSWNVMISGYV-----RNKSLSAARNLFEMMPKRDVVS-WNTMLSG 163
+ + N G V R+ L A NL E MP + + W ++L
Sbjct: 343 IVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGA 394
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/541 (40%), Positives = 341/541 (63%), Gaps = 9/541 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D V NT++ YA+ L EA+++F++ P +D TWT ++SGY Q+ + +A ++F+ M
Sbjct: 85 DLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQML 144
Query: 306 E----KNTVSWNAMIAGYVQTKRMDMARELFE-AMTC---KNVASWNTMITGYAQSGEIT 357
N + +++I +R +L + C NV + ++ Y + G +
Sbjct: 145 RFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 204
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A+ +FD + + +SW A+IAG+A+ +E +L LF M R G R + + S+ C+
Sbjct: 205 DAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACS 264
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ LE GK +H ++K G + F GN LL MY K GS+ +A F+ + +DV+SWN+
Sbjct: 265 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 324
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
++ YA+HGFG +A+ FE M+ GI+P++I+ + +L+ACSH+GL+++G Y+ M +D
Sbjct: 325 LLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD- 383
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G++ + HY +VDLLGRAG L+ A ++ MP EP AA W ALL ACR++ TEL A
Sbjct: 384 GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 443
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE +FE++P++ G +V+L N+YA+ GRW D ++VR KM++ GVKK SW+E++N +H
Sbjct: 444 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 503
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP+++ I EE+ K+K+ G+V T V+ V ++E+E L+YHSEK+A+A
Sbjct: 504 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 563
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+ +L+ P G I + KN+RVC DCH+AIK SK VGR II+RD NRFHHF G+CSC DY
Sbjct: 564 FALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDY 623
Query: 778 W 778
W
Sbjct: 624 W 624
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 150/341 (43%), Gaps = 55/341 (16%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ S+ R V N +++ Y G L+ AR+VFD+MP+RD V+W +ISGY ++
Sbjct: 76 HLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFD 135
Query: 142 ARNLFEMMPK---------------------------------------RDVVSWNTMLS 162
A LF M + +V + +L
Sbjct: 136 ALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 195
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VS 218
Y + G D A+ +FD + +N++SWN L+A + + E+A LF+ S
Sbjct: 196 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFS 255
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ SL G L KW+ M E + NT++ YA++ + +A+++F+
Sbjct: 256 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 315
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
+DV +W ++++ Y Q+G +EA F+ M N +S+ +++ + +D
Sbjct: 316 KRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWH 375
Query: 331 LFEAMTCKNVA--SWN--TMITGYAQSGEITHARNLFDRMP 367
+E M + +W+ T++ ++G++ A + MP
Sbjct: 376 YYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMP 416
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
++R + ++L C L G+ +HG L++ F + N LL MY KCGS+EEA
Sbjct: 49 VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKV 108
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+++ ++D ++W T+I+GY++H DAL+LF M G P++ T+ ++ A +
Sbjct: 109 FDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRG 168
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL- 582
G + + G N + ++DL R G +D+AQ + + D +W AL+
Sbjct: 169 CCGHQ-LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIA 226
Query: 583 GACRLYGKTELAEKAAEVI 601
G R G EKA E+
Sbjct: 227 GHARRCG----TEKALELF 241
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 174/437 (39%), Gaps = 109/437 (24%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ + + + R G D A VF+++ R+ VS+NA+I+G+ + A ++F
Sbjct: 184 DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQG 243
Query: 118 MPQ-------------------------------------RDLVSW--NVMISGYVRNKS 138
M + LV++ N ++ Y ++ S
Sbjct: 244 MLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 303
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ AR +F+ + KRDVVSWN++L+ YAQ+G+ + A F+ M + NEIS+ +L A
Sbjct: 304 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTA 363
Query: 195 YVQNGRIEEACMLFESKAN-------WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+G ++E +E W V+ L+G R GD
Sbjct: 364 CSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLG------RAGD------------- 404
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT-WTAMVSGYVQNGKVD----EARMIFD 302
L A R EE P++ W A+++ + + A +F+
Sbjct: 405 ---------------LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 449
Query: 303 AMPEK---NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA-SWNTMITGYAQSGEITH 358
P+ + + +N +G + +++ E+ K A SW EI +
Sbjct: 450 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV----------EIEN 499
Query: 359 ARNLF----DRMPQHDCIS--WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
A ++F +R PQ + I+ W ++A + GY D+ + + + + +N +
Sbjct: 500 AIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEK 559
Query: 413 LSTCANLASLELGKQLH 429
++ L + G +H
Sbjct: 560 IALAFALLNTPPGSTIH 576
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/546 (41%), Positives = 343/546 (62%), Gaps = 18/546 (3%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D ++ N ++ Y++ + A++LF+E PV+ + +W MV + QNG ++A ++F M
Sbjct: 54 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 113
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-------------NVASWNTMITGYAQ 352
++ T ++ V +FE CK NV ++ YA+
Sbjct: 114 KEGTSCSEFTVSSVVCACAAKCC--VFE---CKQLHGFALKTALDSNVFVGTALLDVYAK 168
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G + A +F+ MP+ ++W++++AGY Q+ E++L LF + G N+ +S
Sbjct: 169 CGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSA 228
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
LS CA A+L GKQ+ K G + FV ++L+ MY KCG +EEAY F + +K+V
Sbjct: 229 LSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNV 288
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+ WN +++G++RH +A++ FE M+ +GI P+DIT + +LSACSH GLVEKG +YF
Sbjct: 289 VLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDL 348
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M R + V PN HY+CMVD+LGRAG L EA++ + MPF+ A+ WG+LL +CR+Y E
Sbjct: 349 MIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLE 408
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
LAE AA+ +FE+EP NAG +VLLSN+YAA+ RW +V++ R +++ KK G SW+E++
Sbjct: 409 LAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIK 468
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
+KVH+F VG+ HP IY LE+L ++K+ G+ T+ LHDV E K+ +LR+HSE
Sbjct: 469 HKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSE 528
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLA+ +GI+ +P G PIR+MKNLR+C DCH+ +K S I R II+RD NRFHHF G C
Sbjct: 529 KLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYC 588
Query: 773 SCGDYW 778
SCG++W
Sbjct: 589 SCGEFW 594
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 146/302 (48%), Gaps = 47/302 (15%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L + I+ N L+ Y + G +E A LF+ +VSWN+++G + A +F
Sbjct: 51 LRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFM 110
Query: 241 RMPVR----DEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNG 292
+M E + ++++ A + E ++L + A +VF TA++ Y + G
Sbjct: 111 QMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCG 170
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF-------------------- 332
V +A ++F+ MPE++ V+W++M+AGYVQ + + A LF
Sbjct: 171 LVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALS 230
Query: 333 --------------EAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+A++CK N+ +++I YA+ G I A +F + + + +
Sbjct: 231 ACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVL 290
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W AI++G+++ S +++ F +M++ G N + SVLS C++L +E G++ ++
Sbjct: 291 WNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMI 350
Query: 434 KV 435
+V
Sbjct: 351 RV 352
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 177/379 (46%), Gaps = 42/379 (11%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
R +++ N +++ Y G ++ AR++FD+MP R LVSWN M+ + +N A LF
Sbjct: 52 RADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQ 111
Query: 149 MPKRDV----VSWNTMLSGYAQNGYADAARRI----FDRMLEKNEISWNGLLAAYVQNGR 200
M K + ++++ A +++ L+ N LL Y + G
Sbjct: 112 MQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGL 171
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITG 256
+++A ++FE V+W+S++ G+V+ + +A +F R ++ + ++ ++
Sbjct: 172 VKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 231
Query: 257 YAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
A L E +++ + ++F ++++ Y + G ++EA +F ++ EKN V W
Sbjct: 232 CAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLW 291
Query: 313 NAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
NA+++G+ + R A FE M C N ++ ++++ + G + R FD M +
Sbjct: 292 NAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIR 351
Query: 369 HDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT-------SVLSTC 416
+S ++ ++ ++G L E K + ++R PF S+L++C
Sbjct: 352 VHNVSPNVLHYSCMVDILGRAG-------LLHEAKDF---IDRMPFDATASMWGSLLASC 401
Query: 417 ANLASLELGKQLHGQLVKV 435
+LEL + L ++
Sbjct: 402 RIYRNLELAEVAAKHLFEI 420
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S+ N A++E G H Q+++VG A N L+ MY KCG VE A F+E+ + ++
Sbjct: 29 SSARNRAAIE-GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLV 87
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWNTM+ + ++G + AL+LF M+ G + T+ ++ AC+ V + + +
Sbjct: 88 SWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQ-LHGF 146
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+ N T ++D+ + G + +A + + MP D TW +++ Y + EL
Sbjct: 147 ALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVAG---YVQNEL 202
Query: 594 AEKA 597
E+A
Sbjct: 203 YEEA 206
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 152/365 (41%), Gaps = 67/365 (18%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPR---------------------------------- 89
WN + +H +NG C+ AL +F M +
Sbjct: 89 WNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFAL 148
Query: 90 RSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
++++ N + LL+ G + A VF+ MP+R V+W+ M++GYV+N+ A
Sbjct: 149 KTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALV 208
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE---------KNEISWNGLLAAY 195
LF + N A + A A I + ++ N + L+ Y
Sbjct: 209 LFHRAQAMG-LEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMY 267
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWN 251
+ G IEEA +F S VV WN+++ GF + R +A F++M +++++
Sbjct: 268 AKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYI 327
Query: 252 TMITGYAQNNYLAEAQRLFE-----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++++ + + + ++ F+ +V ++ MV + G + EA+ D MP
Sbjct: 328 SVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPF 387
Query: 307 KNTVS-WNAMIAGYVQTKRMDM----ARELFEAMTCKNVASWNTMITGYAQSG---EITH 358
T S W +++A + +++ A+ LFE + N + + YA + E+
Sbjct: 388 DATASMWGSLLASCRIYRNLELAEVAAKHLFE-IEPHNAGNHVLLSNIYAANDRWEEVAR 446
Query: 359 ARNLF 363
ARNL
Sbjct: 447 ARNLL 451
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 261/769 (33%), Positives = 398/769 (51%), Gaps = 64/769 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ D+ + + + G DSA VF+ + R + +NAMIS + + Q D A ++F Q
Sbjct: 171 ELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQ 230
Query: 118 M------PQR---------------------------------DLVSWNVMISGYVRNKS 138
M P + D V +++ Y +
Sbjct: 231 MRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGK 290
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
+ A +FE + +RDVVSWN ML+ A NG+ D A + F ML E L + +
Sbjct: 291 VDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGE------LPSRITY 344
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
I AC L + G FVK + I V N +
Sbjct: 345 VAILNACFLAAHLKH----------GDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKS 394
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNA 314
+ + + L ++ + W ++S YV+N + +EA IF M +TVS
Sbjct: 395 PKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMT 454
Query: 315 MIAGYVQTKRMDMAR----ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
+ + ++ + L E+ + N ++T YA+ G + AR +FD M +
Sbjct: 455 VFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRN 514
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
ISW A++ ++Q G + ++LR+F + G N FT+VL+ C NLAS+ K +
Sbjct: 515 VISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQA 574
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
L + GF V N LL KCGS+EE + F+ + K+ +SWNT IA A+HG G
Sbjct: 575 CLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVR 634
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
+ LF++M+ GI +T++G+LS+CSH GLV +G YF +M+ DYG ++HY+C++
Sbjct: 635 GVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVI 694
Query: 551 DLLGRAGRLDEAQNLMKNMPF-EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
DLL RAG L+ A+ +K +PF + W LL C+L+G E +A + I + P +
Sbjct: 695 DLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGST 754
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
G Y+++ NLYA +G+W + + VR M + G KK G SW+EV+ ++H F VGDT HP
Sbjct: 755 GPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSS 814
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
I+ LE L ++K+ GFV K V++D+ +EKE +L HSEKLA+A+G++S AG P+
Sbjct: 815 EIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPL 874
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+MKNLRVC DCH+A K IS +VGR I++RD RFHHF GG+CSC D+W
Sbjct: 875 RIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 128/556 (23%), Positives = 231/556 (41%), Gaps = 101/556 (18%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKN 184
+++ Y + S AR +F+ + + VV+W +++ A++G+ A +F M + N
Sbjct: 81 LLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPN 140
Query: 185 EISWNGLLAAYVQNGRIE------EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
++++ +L A ++ EAC E +V+ ++M + K L A +
Sbjct: 141 DVTYVAVLGACGHPWEVDTIRARVEACGSLE----LDVIVATAVMNAYGKCGDLDSAWGV 196
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---------------------------- 270
FD + VRD WN MI+ + EA LF
Sbjct: 197 FDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDF 256
Query: 271 -----------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
E A D TA+V+ Y + GKVD+A IF+ + E++ VSWNAM+
Sbjct: 257 SEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTAN 316
Query: 320 VQTKRMDMARELFEAMTCKN--------VASWNT-MITGYAQSGEI--THARNLFDRMPQ 368
D A + F M VA N + + + G+ T A +
Sbjct: 317 ACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIES 376
Query: 369 HDCISWAAIIAGYA-----QSGYSED-----------------SLRLFIEMKRYGE---- 402
D + AI+ Y+ +S +S L L++E +++ E
Sbjct: 377 VDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTI 436
Query: 403 ---------RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
++ +V + C + ASLE GK +H L + V NAL+ MY +
Sbjct: 437 FRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYAR 496
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
GS+E+A F+ + ++VISW M+ +++ G ++AL +F S+ G+ P+++T +
Sbjct: 497 LGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAV 556
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L+AC + + + + + G N + ++ LG+ G L+E N + M +
Sbjct: 557 LNACGNLASI-PAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVK- 614
Query: 574 DAATWGALLGACRLYG 589
+ +W + A +G
Sbjct: 615 NQVSWNTAIAANAQHG 630
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 23/248 (9%)
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R L R P+ D +S++ + + D L+ F + + S F +++ CA L
Sbjct: 4 RFLGRRKPRIDPVSFST-----SAPQHRTDELKYFDDGSA-----DASTFAALIHKCARL 53
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
L G+++HG +++ G E G F+G LL MYCKCGS EEA F+ I DK V++W ++I
Sbjct: 54 HDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLI 113
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH---TGLVEKGTEYFYSMNRD 536
AR G K+A LF M+ G+ P+D+T V +L AC H + E S+ D
Sbjct: 114 GVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRARVEACGSLELD 173
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
V T +++ G+ G LD A + + DAA W A++ L E ++
Sbjct: 174 VIVA------TAVMNAYGKCGDLDSAWGVFDGILVR-DAAVWNAMIS---LLVAHEQGDE 223
Query: 597 AAEVIFEM 604
A E+ +M
Sbjct: 224 ALELFRQM 231
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 139/289 (48%), Gaps = 9/289 (3%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y + G AR +F + ++W ++I A+SG+ +++ LF EM+ G N
Sbjct: 81 LLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPN 140
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ +VL C + ++ + ++ G E V A++ Y KCG ++ A+ F
Sbjct: 141 DVTYVAVLGACGHPWEVD---TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVF 197
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ I+ +D WN MI+ H G +AL LF M+ G+ P+ T V L+AC H+
Sbjct: 198 DGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFS 257
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+ ++ R+ ++ T +V++ G+ G++D+A+ + + + E D +W A+L A
Sbjct: 258 EALR-IHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNAMLTA 315
Query: 585 CRLYGKTELAEKA-AEVIFEMEPENAGMYVLLSN--LYAASGRWGDVSK 630
G + A K E++ E + YV + N AA + GD K
Sbjct: 316 NACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVK 364
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/658 (36%), Positives = 376/658 (57%), Gaps = 55/658 (8%)
Query: 175 RIFDRMLEKNEISWNGLLAAYV---------QNGRIEEACMLFESKANWEVVSWNSLMGG 225
R+F ML + + + +L + Q G+ + C S + V +SL+
Sbjct: 60 RVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGK-QMHCFALVSGLGLDSVVLSSLLHM 118
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTW 281
+V+ L DA+ +FD++P V+ + +I+ +A+ + E + LF + ++ +W
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178
Query: 282 TAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAG----------------- 318
M+SG+ ++G +A ++F M P+ +VS G
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238
Query: 319 -------YVQTKRMDM------AREL---FEAMTCKNVASWNTMITGYAQSGEITHARNL 362
+V + +DM A E+ F M +V + N ++TG +++G + +A +
Sbjct: 239 QGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEV 298
Query: 363 FDRMPQHD--CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
F + D +SW ++IA +Q+G ++L LF EM+ G + N +L C N+A
Sbjct: 299 FKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIA 358
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+L GK H ++ G +VG+AL+ MY KCG + + F+ + +++++SWN+++A
Sbjct: 359 ALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMA 418
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYA HG +A+ +FE M+ G KPD ++ +LSAC+ GL E+G YF SM+R++GV
Sbjct: 419 GYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVE 478
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
+HY+CMV LLGR+GRL+EA ++K MPFEPD+ WGALL +CR++ + +L E AA+
Sbjct: 479 ARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKR 538
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+FE+EP N G Y+LLSN+YA+ W +V VR MR RG+KK GYSW+E++NKVH
Sbjct: 539 VFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLA 598
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD+ HP+ +I L +L ++K+ G+V T VL DV E++KE +L HSEKLAV G+
Sbjct: 599 GDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGL 658
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
L+ G P++V+KNLR+C DCH IK IS R I +RD NRFH F GG CSCGDYW
Sbjct: 659 LNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 194/418 (46%), Gaps = 24/418 (5%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF----E 147
SV ++++ Y+ L AR VFD++PQ +V+ + +IS + R + + LF +
Sbjct: 109 SVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRD 168
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY----VQNG 199
+ + ++VSWN M+SG+ ++G A +F M L+ + S + +L A +
Sbjct: 169 LGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLM 228
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
I+ C + + + ++L+ + K + +F+ M D + N ++TG ++
Sbjct: 229 GIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSR 288
Query: 260 NNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVS 311
N + A +F++ D V +WT+M++ QNGK EA +F M P T+
Sbjct: 289 NGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIP 348
Query: 312 WNAMIAGYVQTKRMDMARELFEAM--TCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
G + A F +V + +I YA+ G + +R FD MP
Sbjct: 349 CLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNR 408
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ +SW +++AGYA G + +++ +F M+R G++ + FT VLS C E G
Sbjct: 409 NLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYF 468
Query: 430 GQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ + G EA + ++ + + G +EEAY +++ + D W +++ H
Sbjct: 469 DSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVH 526
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 130/325 (40%), Gaps = 59/325 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL--VS 125
I + + C VFN M + NA+++G NG +D A +VF Q DL VS
Sbjct: 252 IDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVS 311
Query: 126 WNVMISGYVRNKSLSAARNLFE----------------MMPK------------------ 151
W MI+ +N A LF ++P
Sbjct: 312 WTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSL 371
Query: 152 -----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM 206
DV + ++ YA+ G A+R FD M +N +SWN L+A Y +G+ EA
Sbjct: 372 RNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAIN 431
Query: 207 LFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWI-FDRMPVRDEVS-----WNTMITG 256
+FE + VS+ ++ Q L + W FD M V ++ M+T
Sbjct: 432 IFELMQRCGQKPDHVSFTCVLSA-CTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTL 490
Query: 257 YAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVD----EARMIFDAMPEK--NT 309
++ L EA + ++ P + D W A++S + +VD A+ +F+ P N
Sbjct: 491 LGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNY 550
Query: 310 VSWNAMIAGYVQTKRMDMARELFEA 334
+ + + A +DM R++ +
Sbjct: 551 ILLSNIYASKAMWVEVDMVRDMMRS 575
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 132/308 (42%), Gaps = 44/308 (14%)
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
IS I +++ + +R+F M G + +V+ TCA L++L+ GKQ+H
Sbjct: 40 ISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCF 99
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI------------------------ 467
+ G V ++LL MY + +++A + F+++
Sbjct: 100 ALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKET 159
Query: 468 -----------VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
V+ +++SWN MI+G+ R G DA+++F++M G+KPD ++ +L A
Sbjct: 160 KELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPA 219
Query: 517 CSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
+ G + + Y + + G P+ + ++D+ G+ E + M E D
Sbjct: 220 VGDLDMPLMGIQIHCYVIKQGLG--PDKFVVSALIDMYGKCACASEMSGVFNEMD-EVDV 276
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL-- 633
AL+ + L + A EV + + + + S + + S D+ + L
Sbjct: 277 GACNALVTG---LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFR 333
Query: 634 KMRDRGVK 641
+M+ GVK
Sbjct: 334 EMQIEGVK 341
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 56/300 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D+ N +T RNG D+AL VF + VS+ +MI+ NG+ A ++F +
Sbjct: 275 DVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFRE 334
Query: 118 M------PQ---------------------------------RDLVSWNVMISGYVRNKS 138
M P D+ + +I Y +
Sbjct: 335 MQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGR 394
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ A+R F+MMP R++VSWN++++GYA +G A IF+ M + + +S+ +L+A
Sbjct: 395 MLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSA 454
Query: 195 YVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
Q G EE F+S + V ++ ++ + RL +A + +MP D
Sbjct: 455 CTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSC 514
Query: 249 SWNTMITGYAQNNYL----AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
W +++ +N + A+R+FE P ++ + + + Y E M+ D M
Sbjct: 515 VWGALLSSCRVHNRVDLGEIAAKRVFELEP-RNPGNYILLSNIYASKAMWVEVDMVRDMM 573
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/582 (39%), Positives = 337/582 (57%), Gaps = 10/582 (1%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-----PVRDEVSWNTMITGYAQNN 261
LF N +V +N+L+ G +A +F M + D S+ ++ A
Sbjct: 61 LFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCR 120
Query: 262 YLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
L +L A +F T ++S Y + + AR +FD M E N V+WNA++A
Sbjct: 121 ALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVA 180
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
+ + + A ++F M +N+ SWN M+ GY ++GE+ AR +F +MP D +SW+ +
Sbjct: 181 ACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTM 240
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
I G+A +G D+ F E++R G R N T VLS CA + E G+ LHG + K GF
Sbjct: 241 IVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGF 300
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
V NAL+ Y KCG+++ A F+ ++ + +SW MIAG A HG+G++A+ LF
Sbjct: 301 LQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNE 360
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ IKPD IT + IL ACSH GLV+ G YF M YG+ P +HY CMVDL GRAG
Sbjct: 361 MEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAG 420
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
+L +A + + MP P+ W LLGAC ++G LA + + E++PEN+G +VLLSN
Sbjct: 421 KLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSN 480
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
+YA +G+W DV+ +R M + +KK G+S +EV +++F G+ + + L E
Sbjct: 481 IYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLRE 540
Query: 678 LEFKLK-QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
+ +L+ + G+V VLHD+ EEKE + HSEKLAVA+G+ +P GR IRV+KNLR
Sbjct: 541 IMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLR 600
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+C DCH +K ISK+ I++RD +RFH F+ GSCSC DYW
Sbjct: 601 ICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 188/416 (45%), Gaps = 60/416 (14%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQR-----DLVSWNVMISGYVRNKSLSAARNLFEMM 149
YN +I G + A Q+F +M ++ D S+ ++ ++L+ L +
Sbjct: 73 YNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLA 132
Query: 150 PKRDVVSW----NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
+ S T++S YA+ AR++FD M+E N ++WN ++AA + +++A
Sbjct: 133 VGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAE 192
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+F + SWN ++ G+ K L A+ +F +MP++D+VSW+TMI G+A N +
Sbjct: 193 QVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFND 252
Query: 266 AQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW----NAMIA 317
A F E + + + T ++S Q G + R++ + + + NA+I
Sbjct: 253 AFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALID 312
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + +DMAR +F+ M ++ SW MI G
Sbjct: 313 TYSKCGNLDMARLVFDNMLRRSAVSWTAMIAG---------------------------- 344
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-G 436
A GY E+++RLF EM+ + + F S+L C++ ++LG ++V G
Sbjct: 345 ---MAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYG 401
Query: 437 FEA-----GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
E GC V +Y + G +++AY ++ + + I W T++ + HG
Sbjct: 402 IEPVIEHYGCMVD-----LYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHG 452
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I+ + C A VF+ M + V++NA+++ + A QVF MP R+L SWN
Sbjct: 148 ISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWN 207
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEK 183
+M++GY + L AR +F MP +D VSW+TM+ G+A NG + A F + +
Sbjct: 208 IMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRP 267
Query: 184 NEISWNGLLAAYVQNGRIEEACML--FESKANW-EVVSW-NSLMGGFVKQKRLGDAKWIF 239
NE+S G+L+A Q G E +L F K+ + +++S N+L+ + K L A+ +F
Sbjct: 268 NEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVF 327
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVD 295
D M R VSW MI G A + Y EA RLF EE+ +K D T+ +++ G VD
Sbjct: 328 DNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVD 387
Query: 296 E-----ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG 349
+RM+ E + M+ Y + ++ A + M N W T++
Sbjct: 388 LGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGA 447
Query: 350 YAQSGEITHA----RNLFDRMPQH--DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+ G + A R L + P++ D + + I YA +G +D L M +R
Sbjct: 448 CSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNI---YAVAGKWKDVAALRRSMTH--QR 502
Query: 404 LNRSP 408
L ++P
Sbjct: 503 LKKTP 507
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 135/330 (40%), Gaps = 70/330 (21%)
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS-PFTSVLSTC 416
+AR LF + D + +I G + S ++L+LF+EM+R L S F +L
Sbjct: 57 YARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAA 116
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI--- 473
AN +L G QLH V G ++ FVG L+ MY +C + A F+E+++ +++
Sbjct: 117 ANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWN 176
Query: 474 ----------------------------SWNTMIAGY--------ARHGFGK-------- 489
SWN M+AGY AR F K
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVS 236
Query: 490 ---------------DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
DA F ++ G++P+++++ G+LSAC+ G E G +
Sbjct: 237 WSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFG-RILHGFV 295
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
G + ++D + G LD A+ + NM A +W A++ ++G
Sbjct: 296 EKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNM-LRRSAVSWTAMIAGMAMHG---YG 351
Query: 595 EKAAEVIFEMEPEN--AGMYVLLSNLYAAS 622
E+A + EME N +S LYA S
Sbjct: 352 EEAIRLFNEMEESNIKPDSITFISILYACS 381
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 173/406 (42%), Gaps = 38/406 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDS-----ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV 114
DIR +V + + G DS AL +F M R+S ++ +LL + R +
Sbjct: 64 DIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAAN-CRAL 122
Query: 115 FDQMP----------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
+ + L +IS Y L AR +F+ M + ++V+WN +++
Sbjct: 123 TNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAAC 182
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
+ A ++F M +N SWN +LA Y + G ++ A +F + VSW++++
Sbjct: 183 FRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIV 242
Query: 225 GFVKQKRLGDAKWIF---DRMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
GF DA F R +R +EVS +++ AQ E R+ K F
Sbjct: 243 GFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAF-EFGRILHGFVEKSGFL 301
Query: 281 WT-----AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
A++ Y + G +D AR++FD M ++ VSW AMIAG + A LF M
Sbjct: 302 QIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEM 361
Query: 336 TCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGY 386
N+ ++ +++ + +G + + F RM I + ++ Y ++G
Sbjct: 362 EESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGK 421
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+ + +M N + ++L C+ +L L Q+ QL
Sbjct: 422 LQQAYDFVCQMPISP---NDIVWRTLLGACSIHGNLYLAGQVKRQL 464
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/657 (37%), Positives = 385/657 (58%), Gaps = 24/657 (3%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG-----LLAAYV 196
AR +F+ + +R+ SW+ ++ Y QN A ++ M+ + EIS + +LAA
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV-REEISIDAYTLSSVLAACT 59
Query: 197 QNGRIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDAKWIFDRM-PVRDEVSW 250
+ +EE M+ + KA +VV SL+ F K L +A+ +F M +RD +S
Sbjct: 60 KLLDVEEGRMV-QRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISV 118
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PE 306
MI Y + L +++ LF VKDV +W AM++ Y G +A +F M
Sbjct: 119 TAMIGAYCGS--LKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHT 176
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNL 362
+ ++++++ KR++ R L +T + + A N +I+ Y + G + AR
Sbjct: 177 PDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRY 236
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F + + + +W ++A YAQ +D+L L+ M G +R F+SV+ +CA+L +L
Sbjct: 237 FYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGAL 296
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
GK +H GFE +G AL+ MY KCGS+ +A +F+ I +KDV+SW+ MIA
Sbjct: 297 REGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAAS 356
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A+HG ++AL L M GI +++T +L ACSH G + +G +YF +++D+G+ +
Sbjct: 357 AQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERD 416
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
++ +DLLGRAG L EA++++ MPF+ LLG C+++G + + I
Sbjct: 417 EENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIV 476
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+EPEN G YVLL+N+YAA+GRW DV+K+R MR +GVK+ TG S +E ++K++ FSVGD
Sbjct: 477 ALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGD 536
Query: 663 TLHPEKDRIYAYLEELEFKLK-QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
T +P I A LE L ++K ++G+V T+ V HDV +++KE +L++HSEK+A+ +G++
Sbjct: 537 TSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLI 596
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ P G +R++KNLRVC DCH K SKI GR II+RD RFHHF GG CSCGDYW
Sbjct: 597 TSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 136/284 (47%), Gaps = 19/284 (6%)
Query: 75 GCCDSALHVFNSM-PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
GC + A VF SM R +S AMI Y G L ++ +F M +D+VSWN MI+ Y
Sbjct: 97 GCLEEAESVFRSMGAMRDIISVTAMIGAYC--GSLKDSKSLFLTMDVKDVVSWNAMIAAY 154
Query: 134 VRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAAR----RIFDRMLEKNE 185
A +LF M D+ +++++L A + R RI R +++
Sbjct: 155 TLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDF 214
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
N L++ Y + G +E A F S E+ +WN+++ + + + DA +++ M +
Sbjct: 215 AMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLE 274
Query: 246 ----DEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEA 297
D ++++++ A L E + + E + KDV TA+V+ Y + G + +A
Sbjct: 275 GFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADA 334
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
+ FD + K+ VSW+AMIA Q + A EL M + +A
Sbjct: 335 KKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIA 378
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/639 (36%), Positives = 365/639 (57%), Gaps = 48/639 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N MIS + G LD AR++FD+MPQ + +SW +ISG+++ + + FE P +
Sbjct: 88 VVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQ 147
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISW-------------------- 188
+VVSW +SGY QNG++ A ++F ++LE N++++
Sbjct: 148 NVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVL 207
Query: 189 ---------------NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
N L+ ++ G I A +F+ +VVSW +++ +V+ LG
Sbjct: 208 GLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELG 267
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYV 289
+A+ IFD MP R+EVSW+ MI Y Q+ Y E+ RLF +E ++ +++++S
Sbjct: 268 EARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALA 327
Query: 290 QNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+ I + EK+ +++I Y + R LF+ + KN+ SWN
Sbjct: 328 SVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNA 387
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
M+ GY+ +G + A+ LF+ MP + +SW+AIIAG+ ++ +F EM GE N
Sbjct: 388 MVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPN 447
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+S F+S+L CA+ ASL+ GK LHG++VK+G + +VG AL MY K G +E + F
Sbjct: 448 KSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFN 507
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVE 524
+ K+ +SW MI G A G +++L LFE M KT I P+++ + +L ACSH+GLV+
Sbjct: 508 RMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVD 567
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
KG YF SM YG+ P +H+TC+VD+L RAGRL EA+ + +MPF+P+ W ALL
Sbjct: 568 KGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSG 627
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+ Y ELAE+ A ++EM +N YVLLSN+YA++GRW DV KVR M+ +G+KK
Sbjct: 628 CKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSG 687
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
G SW+E++++VH+F D H + IY LE L +++K
Sbjct: 688 GCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMK 726
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 112/305 (36%), Gaps = 89/305 (29%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY------------------ 451
S+L N + G LH L K G + ++ LL+MY
Sbjct: 25 VSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDG 84
Query: 452 -------------CKCGSVEEAYHAFEEIVD----------------------------- 469
+ G+++EA F+E+
Sbjct: 85 FDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERN 144
Query: 470 --KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG------ 521
++V+SW I+GY ++GF +A+ LF + +KP+ +T ++ AC++ G
Sbjct: 145 PFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGM 204
Query: 522 -----LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+V+ G E+ + + NS ++ L R G + A+ + M E D
Sbjct: 205 SVLGLIVKTGYEHDLA-------VSNS-----LITLCLRMGEIHLAREVFDRME-EKDVV 251
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+W A+L LY + + +A + EM N + + Y SG + ++ +M
Sbjct: 252 SWTAILD---LYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMI 308
Query: 637 DRGVK 641
G K
Sbjct: 309 QEGFK 313
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/572 (37%), Positives = 347/572 (60%), Gaps = 13/572 (2%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
++S++ + K L A+ I + D N++I Y + +++A+ +F+ P
Sbjct: 65 YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
+DV +WT +++GY QN EA + M +++ R + E
Sbjct: 125 TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQ 184
Query: 335 MTC--------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
M ++V + ++ YA+ ++ A +FD + + +SW A+IAG+A+ G
Sbjct: 185 MHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGD 244
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E +L F EM+R G ++SV S A + +LE G+ +H ++K G + FV N
Sbjct: 245 GETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANT 304
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+L MY K GS+ +A F+ + +D+++WNTM+ +A++G GK+A+ FE ++ GI+ +
Sbjct: 305 ILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLN 364
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT + +L+ACSH GLV++G +YF M +DY V P HY VDLLGRAG L EA +
Sbjct: 365 QITFLSVLTACSHGGLVKEGKQYF-DMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFV 423
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
MP EP AA WGALLGACR++ ++ + AA+ +FE++PE+ G VLL N+YA++G+W
Sbjct: 424 FKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWD 483
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
D ++VR M+ GVKK SW+E++N VH F D+ HP+ + IY EE+ ++K+ G
Sbjct: 484 DAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAG 543
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V +T VL + E+E+E L+YHSEK+A+A+ ++++PAG IR+MKN+R+C DCH+A +
Sbjct: 544 YVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFR 603
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S++ R I++RD NRFHHFS GSCSCGDYW
Sbjct: 604 YVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 121/296 (40%), Gaps = 82/296 (27%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMPKR-- 152
N++I Y G + AR VFD +P RD+VSW +I+GY +N + A L +M+ R
Sbjct: 101 NSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFR 160
Query: 153 ------------------------------------DVVSWNTMLSGYAQNGYADAARRI 176
DV + +L YA+ D A R+
Sbjct: 161 PSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRV 220
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-------------------------- 210
FD + KNE+SWN L+A + + G E M F
Sbjct: 221 FDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGAL 280
Query: 211 -----------KANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
K+ ++ ++ N+++G + K + DA+ +FDR+ RD V+WNTM+T +
Sbjct: 281 EQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAF 340
Query: 258 AQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
AQ EA FEE + T+ ++++ G V E + FD M + N
Sbjct: 341 AQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNV 396
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 126/275 (45%), Gaps = 31/275 (11%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + + + R D A+ VF+ + ++ VS+NA+I+G+ G + F +
Sbjct: 195 DEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAE 254
Query: 118 MPQRDL----VSWNVMISGYVRNKSLSAAR----NLFEMMPKRDVVSWNTMLSGYAQNGY 169
M + +++ + S R +L R ++ + K NT+L YA++G
Sbjct: 255 MQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGS 314
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLM-- 223
AR++FDR+ +++ ++WN +L A+ Q G +EA FE + + +++ S++
Sbjct: 315 MVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTA 374
Query: 224 ---GGFVKQKRLGDAKWIFDRMP---VRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVK 276
GG VK+ K FD M V E+ + + + + L EA + P++
Sbjct: 375 CSHGGLVKE-----GKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPME 429
Query: 277 DV-FTWTAMVSG--YVQNGKVDE--ARMIFDAMPE 306
W A++ +N K+ + A +F+ PE
Sbjct: 430 PTAAVWGALLGACRMHKNAKIGQYAADHVFELDPE 464
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 355/572 (62%), Gaps = 15/572 (2%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW----NTMITGYAQNNYLAEAQRLFEEAP 274
++SL+ + + L DA+ I + N++I Y + +A+A+R+F+ P
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
+D+ +WT++++GY QN DEA + M + N ++ +++ + + +
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 331 LFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ A+T K +V + ++ YA+ G + A +FD++ + +SW A+IAG+A+ G
Sbjct: 187 I-HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
E +L +F EM+R G ++SV S A + +LE GK +H ++K G FVGN
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+L MY K GS+ +A F+ + KDV++WN+M+ +A++G G++A+ FE M+ G+
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ IT + IL+ACSH GLV++G +YF M ++Y + P HY +VDLLGRAG L++A
Sbjct: 366 NQITFLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ MP +P AA WGALLG+CR++ ++ + AA+ +FE++P++ G VLL N+YA++G+W
Sbjct: 425 IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQW 484
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
++VR M+ GVKK SW+E++N VH F D HP + IY EE+ ++++
Sbjct: 485 DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA 544
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+V +T VL V E+E++ L+YHSEK+A+A+ ++++P G IR+MKN+R+C DCH+A
Sbjct: 545 GYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAF 604
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
++ISK+ R I++RD NRFHHFS GSCSCGDY
Sbjct: 605 RYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 147/339 (43%), Gaps = 25/339 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + G A VF+ MP R S+ ++I+GY N D A + M +
Sbjct: 103 NSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFK 162
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPK--------RDVVSWNTMLSGYAQNGYADAARRI 176
+ ++ SA+ + E + DV + +L YA+ G D A +
Sbjct: 163 PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE--SKANWEVV--SWNSLMGGFVKQKRL 232
FD++ KN +SWN L+A + + G E ++F + +E +++S+ L
Sbjct: 223 FDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGAL 282
Query: 233 GDAKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
KW+ M E NT++ YA++ + +A+++F+ KDV TW +M++ +
Sbjct: 283 EQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAF 342
Query: 289 VQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----V 340
Q G EA F+ M + N +++ +++ + ++ F+ M N +
Sbjct: 343 AQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEI 402
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAII 378
+ T++ ++G + A +MP + W A++
Sbjct: 403 DHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 58 DW--DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
DW D+ + + + R G D A+ VF+ + ++ VS+NA+I+G+ G + +F
Sbjct: 195 DWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMF 254
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQN 167
+M + +++ + S +L + + M K NT+L YA++
Sbjct: 255 AEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKS 314
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLM 223
G AR++FDR+ +K+ ++WN +L A+ Q G EA FE V +++ S++
Sbjct: 315 GSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSIL 374
Query: 224 -----GGFVKQKRLGDAKWIFDRM 242
GG VK+ K FD M
Sbjct: 375 TACSHGGLVKE-----GKQYFDMM 393
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 257/763 (33%), Positives = 411/763 (53%), Gaps = 61/763 (7%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMIS 131
C A VF+ MP R V++N++ S Y+ G VF +M + D V+ + ++S
Sbjct: 191 CVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILS 250
Query: 132 ---------------------GYVRNKSLS--------------AARNLFEMMPKRDVVS 156
G V N +S A+ +F++MP R+V++
Sbjct: 251 ACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVIT 310
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML--FES 210
WN++ S Y G+ +F M ++ + ++ + +L A Q ++ + F
Sbjct: 311 WNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV 370
Query: 211 KANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
K +V +L+ + + +A+ +FD MP R+ V+WN++ + Y + +
Sbjct: 371 KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLN 430
Query: 269 LFEEAPVK----DVFTWTAMVSGY-----VQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+F E + D+ T +++ +++GKV + M E V NA+++ Y
Sbjct: 431 VFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVC-NALLSLY 489
Query: 320 VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWA 375
+ + A+ +F+ + + VASWN ++T Y + E +F +M + D I+W+
Sbjct: 490 AKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWS 549
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+I G ++ E+++ +F +M+ G + + + S+L C+ L +GK++H + +
Sbjct: 550 VVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRH 609
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
+ NAL+ MY KCG + + + F+ + KDV SWNTMI HG GK+AL LF
Sbjct: 610 WKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLF 669
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
E M +KPD T +LSACSH+ LVE+G + F SM+RD+ V P ++HYTC+VD+ R
Sbjct: 670 EKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSR 729
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
AG L+EA ++ MP EP A W A L CR+Y ELA+ +A+ +FE++P + YV L
Sbjct: 730 AGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTL 789
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
N+ + W + SK+R M++RG+ K G SW V N+VHTF GD + E D+IY +L
Sbjct: 790 FNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFL 849
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
+EL K+K G+ T VLHD+ +EEK L HSEKLAVA+GIL++ IRV KNL
Sbjct: 850 DELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNL 909
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+C DCHNAIK++S +VG I++RD+ RFHHF G+CSC D+W
Sbjct: 910 RICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 145/633 (22%), Positives = 262/633 (41%), Gaps = 155/633 (24%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+ N I Y + K + AR +F+ + RDVV+WN++ + Y G+ +F +M
Sbjct: 74 DVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMG 133
Query: 181 ---LEKNEISWNGLLAA----------------YVQNGRIEEACMLFESKANWEVVSWNS 221
++ N ++ + +L V++G +E+ +F S A
Sbjct: 134 LNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVED---VFVSSA--------- 181
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------- 272
+ + K + +A+ +FD MP RD V+WN++ + Y + + +F E
Sbjct: 182 FVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPD 241
Query: 273 ------------------------------APVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
V++VF A+V+ Y V EA+ +FD
Sbjct: 242 PVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFD 301
Query: 303 AMPEKNTVSWNAMIAGY--------------------VQTKRMDMARELFEAMTCKNVAS 342
MP +N ++WN++ + Y V+ M M+ L K++ S
Sbjct: 302 LMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKS 361
Query: 343 WNT-------------------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
T ++ YA + A+ +FD MP + ++W ++ + Y
Sbjct: 362 GKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVN 421
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G+ + L +F EM G + + S+L C++L L+ GK +HG V+ G FV
Sbjct: 422 CGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFV 481
Query: 444 GNALLVMYCKCGSVEEAYHAFEEI-----------------------------------V 468
NALL +Y KC V EA F+ I V
Sbjct: 482 CNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEV 541
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
D I+W+ +I G ++ ++A+ +F M+T+G KPD+ T+ IL ACS + + G E
Sbjct: 542 KADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKE 601
Query: 529 ---YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
Y + +D+ + + +VD+ + G L ++N+ MP + D +W ++ A
Sbjct: 602 IHCYVFRHWKDWDLARTNA----LVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFAN 656
Query: 586 RLY--GKTELAEKAAEVIFEMEPENAGMYVLLS 616
++ GK L+ ++ ++P++A +LS
Sbjct: 657 GMHGNGKEALSLFEKMLLSMVKPDSATFTCVLS 689
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 191/396 (48%), Gaps = 22/396 (5%)
Query: 241 RMPVRDEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
R V +VS N I Y + + A+R+F++ +DV TW ++ + YV G +
Sbjct: 68 RCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLN 127
Query: 300 IFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYA 351
+F M + N ++ ++++ G + + +E+ + ++V + + YA
Sbjct: 128 VFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYA 187
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ + A+ +FD MP D ++W ++ + Y G+ + L +F EM G + + +
Sbjct: 188 KCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSC 247
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+LS C++L L+ GK +HG +K G FV NAL+ +Y C V EA F+ + ++
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN 307
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
VI+WN++ + Y GF + L +F M G+KPD + M IL ACS ++ G + +
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG-KTIH 366
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
+G++ + T +V+L + EAQ + MP + TW + L +C Y
Sbjct: 367 GFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNS-LSSC--YVNC 422
Query: 592 ELAEKAAEVIFEM-----EPENAGMYVLLSNLYAAS 622
+K V EM +P+ + +LS L+A S
Sbjct: 423 GFPQKGLNVFREMVLNGVKPD---LVTMLSILHACS 455
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G ++++++ + G + ++ F +V CA KQ H + G + +G
Sbjct: 19 GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NA + Y KC VE A F+++V +DV++WN++ A Y GF + L +F M +K
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
+ +T+ IL CS ++ G E + R +G++ + + V+ + + EAQ
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVR-HGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+ MP D TW + L +C Y +K V EM +P+ + +LS
Sbjct: 198 VFDLMPHR-DVVTWNS-LSSC--YVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILS 250
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
DWD+ + N + + + G + +VF+ MP + S+N MI ++G A +F++
Sbjct: 612 DWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEK 671
Query: 118 ----MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS-----WNTMLSGYAQNG 168
M + D ++ ++S + + +F M + +V + ++ Y++ G
Sbjct: 672 MLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAG 731
Query: 169 YADAARRIFDRM-LEKNEISWNGLLAA 194
+ A RM +E I+W LA
Sbjct: 732 CLEEAYGFIQRMPMEPTAIAWKAFLAG 758
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 269/750 (35%), Positives = 417/750 (55%), Gaps = 73/750 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+A++SG+ G D A+ +F+QM R++VS N ++ G V+ K AA +F M +D+V
Sbjct: 321 SALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLV 378
Query: 156 SWNT-----MLSGYAQNGYADAARR--------IFDRMLEKNEISW-NGLLAAYVQNGRI 201
N+ +LS +++ + RR + L N+++ NGL+ Y ++G I
Sbjct: 379 GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAI 438
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN----TMITGY 257
+AC +FE + VSWNSL+ G + + DA F RM + N + ++
Sbjct: 439 ADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSC 498
Query: 258 AQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
A ++ +++ + DV A+++ Y + G E +F MPE + VSWN
Sbjct: 499 ASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWN 558
Query: 314 AMIAG--------------YVQTKR--MDMARELF-------------------EAMTCK 338
++I ++Q R ++R F A+ K
Sbjct: 559 SVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK 618
Query: 339 -----NVASWNTMITGYAQSGEITHARNLFDRMPQ-HDCISWAAIIAGYAQSGYSEDSLR 392
+ A N +++ Y + GE+ +F RM + D +SW ++I+GY + ++
Sbjct: 619 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMD 678
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
L M + G+RL+ F ++LS CA++A+LE G ++H ++ E+ VG+AL+ MY
Sbjct: 679 LVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYS 738
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
KCG ++ A FE + ++V SWN+MI+GYARHG G+ AL LF M G PD +T VG
Sbjct: 739 KCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVG 798
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+LSACSH G VE+G E+F SM+ Y + P +H++CMVDLLGRAG+LDE + + +MP +
Sbjct: 799 VLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMK 858
Query: 573 PDAATWGALLGA-CRLYGK-TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
P+ W +LGA CR G+ TEL +AAE++ E+EP+NA YVLL+N+YA+ +W DV+K
Sbjct: 859 PNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAK 918
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYS 690
R M++ VKK G SW+ +++ VH F GD LHPEKD IY L EL K++ G++
Sbjct: 919 ARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQ 978
Query: 691 TKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISK 750
TK L D+ E KE +L YHSEK+AVA+ +L+ + PIR+MKNLRVC DCH+A +ISK
Sbjct: 979 TKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISK 1037
Query: 751 IVG---RLIILRDNNRFHHFSGGSCSCGDY 777
I+ ++ + NN + C CGD+
Sbjct: 1038 IIFFFLKMAMKPSNNIW--IRRQQCPCGDW 1065
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/578 (22%), Positives = 238/578 (41%), Gaps = 135/578 (23%)
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
NT+++ Y + G +A+++FD M +N ++W L++ Y QNG+ +EAC F +
Sbjct: 110 NTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFI 169
Query: 218 SWNSLMG---------------------GFVKQKRLG---------------------DA 235
+ G G + + R G DA
Sbjct: 170 PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDA 229
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------------------------- 270
+ +FD + +R+ +SWN++I+ Y++ A LF
Sbjct: 230 RSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITT 289
Query: 271 --------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+ ++D++ +A+VSG+ + G D+A+ IF+ M +N V
Sbjct: 290 ACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVV 349
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM----------------------------------- 335
S N ++ G V+ K+ + A ++F M
Sbjct: 350 SMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVH 409
Query: 336 --------TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
VA N ++ YA+SG I A ++F+ M + D +SW ++I+G Q+ S
Sbjct: 410 AHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECS 469
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
ED+ F M+R G + S LS+CA+L + LG+Q+H +K+G + V NAL
Sbjct: 470 EDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNAL 529
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA-RHGFGKDALMLFESMKTVGIKPD 506
L +Y + G E F + + D +SWN++I + A+ F M G
Sbjct: 530 LALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLS 589
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T + ILSA S L E + +++ Y + ++ ++ G+ G ++E + +
Sbjct: 590 RVTFINILSAVSSLSLHEVSHQ-IHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF 648
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
M D +W +++ Y EL KA ++++ M
Sbjct: 649 ARMSETRDEVSWNSMISG---YIHNELLHKAMDLVWFM 683
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 186/414 (44%), Gaps = 53/414 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN-AMIS--------GYLLNGQ--- 107
D WN I+ +N C + A F+ M R S+ N +IS G+++ G+
Sbjct: 452 DSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIH 511
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
D + D D+ N +++ Y + +F +MP+ D VSWN+++ + +
Sbjct: 512 CDGLKLGLDT----DVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDS 567
Query: 168 -GYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVV 217
A + F +M+ + +++ +L+A V + + E ++ + + +
Sbjct: 568 EASVSQAVKYFLQMMRGGWGLSRVTFINILSA-VSSLSLHEVSHQIHALVLKYCLSDDTA 626
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMITGYAQNNYLAEAQRL----FEE 272
N+L+ + K + + + IF RM RDEVSWN+MI+GY N L +A L ++
Sbjct: 627 IGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 686
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
D FT+ ++S ++ + A E + V +A++ Y + R+D A
Sbjct: 687 GQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYA 746
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM------PQHDCISWAAIIAGYA 382
FE M +NV SWN+MI+GYA+ G A LF RM P H +++ +++ +
Sbjct: 747 SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH--VTFVGVLSACS 804
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
G+ E+ F K E SP S +L LG+ G+L +VG
Sbjct: 805 HVGFVEEGFEHF---KSMSEVYRLSPRVEHFSCMVDL----LGRA--GKLDEVG 849
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 201/443 (45%), Gaps = 85/443 (19%)
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
++ ++I Y + EA+ L ++ V ++F +++ YV+ G + A+ +FD M
Sbjct: 73 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------------------------CK- 338
+N V+W +I+GY Q + D A F M CK
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192
Query: 339 ---------------NVASWNTMITGYAQSGEITH-ARNLFDRMPQHDCISWAAIIAGYA 382
+V N +I+ Y + + AR++FD + + ISW +II+ Y+
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELG----KQLHGQLVK 434
+ G + + LF M++ G + P F S+++T +S++ G +Q+ ++ K
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTAC--SSVDFGLCVLEQMLARVEK 310
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
GF +V +AL+ + + G ++A + FE++ ++V+S N ++ G + G+ A +
Sbjct: 311 SGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 370
Query: 495 FESMK-TVGIKPDDITMVGILSACSHTGLVE----KGTEYF-----YSMNRDYGVIPNSK 544
F MK VGI D + V +LSA S ++E KG E +N + I N
Sbjct: 371 FHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNG- 427
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+V++ ++G + +A ++ + M E D+ +W +L+ + E +E AAE M
Sbjct: 428 ----LVNMYAKSGAIADACSVFELM-VEKDSVSWNSLISG---LDQNECSEDAAESFHRM 479
Query: 605 E-----PENAGMYVLLSNLYAAS 622
P N + L+S L + +
Sbjct: 480 RRTGSMPSN---FTLISTLSSCA 499
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 67/353 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV--F 115
D D+ N + + GC L VF+ MP VS+N++I G L + + ++ V F
Sbjct: 520 DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI-GALSDSEASVSQAVKYF 578
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK-----------RDVVSWNTMLSGY 164
QM + W + ++ S ++ +L E+ + D N +LS Y
Sbjct: 579 LQMMRG---GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCY 635
Query: 165 AQNGYADAARRIFDRMLE-KNEISWNGLLAAYVQNGRIEEACMLF--------------- 208
+ G + +IF RM E ++E+SWN +++ Y+ N + +A L
Sbjct: 636 GKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTF 695
Query: 209 -------ESKANWE-----------------VVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
S A E VV ++L+ + K R+ A F+ MP+
Sbjct: 696 ATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPL 755
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
R+ SWN+MI+GYA++ + +A +LF + D T+ ++S G V+E
Sbjct: 756 RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEH 815
Query: 301 FDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
F +M E +S ++ M+ + ++D + +M K NV W T++
Sbjct: 816 FKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 50/247 (20%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPR-RSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-- 121
N ++ + + G + +F M R VS+N+MISGY+ N L A + M Q+
Sbjct: 629 NALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQ 688
Query: 122 -------------------------------------DLVSWNVMISGYVRNKSLSAARN 144
D+V + ++ Y + + A
Sbjct: 689 RLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASR 748
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGR 200
FE+MP R+V SWN+M+SGYA++G+ + A ++F RM+ + +++ G+L+A G
Sbjct: 749 FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGF 808
Query: 201 IEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV-SWNTMI 254
+EE F+S + + V ++ ++ + +L + + MP++ V W T++
Sbjct: 809 VEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868
Query: 255 TGYAQNN 261
+ N
Sbjct: 869 GACCRAN 875
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF + + C + + ++ S + LF + + +NR +C +
Sbjct: 36 LFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQ-----GSCCS--- 87
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
E ++LH Q +K GF F+ N L+ +Y + G + A F+E+ ++++++W +I+G
Sbjct: 88 -EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 146
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
Y ++G +A F M G P+ L AC +G
Sbjct: 147 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 257/740 (34%), Positives = 394/740 (53%), Gaps = 57/740 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQ--MPQRDLVSWNVMISGYVRN----KSLSAARNLFEMM 149
NA+I+ Y G L AR +FD M + D VSWN +IS +V ++LS R + E+
Sbjct: 187 NALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVG 246
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEAC 205
+ + ++ + L + R I +L+ N + N L+A Y G++E+A
Sbjct: 247 VESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAE 306
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNN 261
+F+S + VSWN+L+ G V+ DA F M D+VS MI ++
Sbjct: 307 RVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSA 366
Query: 262 YLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
L + + ++ +++ Y + V F+ MPEK+ +SW +IA
Sbjct: 367 NLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIA 426
Query: 318 GY---------------VQTKRMDMARELFEA--MTCKNVAS------------------ 342
GY VQ ++MD+ + + + C + S
Sbjct: 427 GYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLAD 486
Query: 343 ---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N ++ Y + + +AR++F+ + D +SW ++I +G + ++L LF +
Sbjct: 487 ILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIE 546
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
+ SVL A L+SL+ GK++HG L++ GF + N+L+ MY +CG++E
Sbjct: 547 TNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMEN 606
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A + F + +D+I W +MI HG GKDA+ LF M + PD IT + +L ACSH
Sbjct: 607 ARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSH 666
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+GLV +G ++F M +Y + P +HY C+VDLL R+ L+EA + ++NMP EP A W
Sbjct: 667 SGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWC 726
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
ALLGACR++ +L E AA+ + ++ EN+G YVL+SN +AA GRW DV +VR M+
Sbjct: 727 ALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNK 786
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD-GFVYSTKLVLHDV 698
+KK G SW+EV+NK+HTF D HP+ + IY L + LK+ G+ TKLV HDV
Sbjct: 787 LKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDV 846
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
EEEK ML HSE+LA+ YG+L G +R+ KNLR+C+DCH K S+I R +++
Sbjct: 847 CEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVV 906
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD +RFHHF G CSCGD+W
Sbjct: 907 RDASRFHHFERGLCSCGDFW 926
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 149/586 (25%), Positives = 250/586 (42%), Gaps = 108/586 (18%)
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISW 188
Y + S A +F+ M +R + +WN M+ G A ++ M + + ++
Sbjct: 92 YGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTF 151
Query: 189 NGLLAAYVQNGRIEEACML--FESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDR--M 242
+L A C + K + V N+L+ + K LG A+ +FD M
Sbjct: 152 PCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLM 211
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFE---------------------EAPV------ 275
D VSWN++I+ + EA LF E P
Sbjct: 212 EKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGR 271
Query: 276 ------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
DV+ A+++ Y G++++A +F +M K+ VSWN +++G VQ
Sbjct: 272 GIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQND 331
Query: 324 RMDMARELFEAM---------------------------------------TCKNVASWN 344
A F+ M N+ N
Sbjct: 332 MYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGN 391
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++I Y + + + + F+ MP+ D ISW IIAGYAQ+ D+L L +++ E++
Sbjct: 392 SLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQL--EKM 449
Query: 405 NRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ P S+L C+ L S +L K++HG ++K G A + NA++ +Y + V+ A H
Sbjct: 450 DVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARH 508
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
FE I KD++SW +MI +G +AL LF S+ I+PD IT+V +L A +
Sbjct: 509 VFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSS 568
Query: 523 VEKGTEYFYSMNRD----YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
++KG E + R G+I NS +VD+ R G ++ A+N+ N + D W
Sbjct: 569 LKKGKEIHGFLIRKGFFLEGLIANS-----LVDMYARCGTMENARNIF-NYVKQRDLILW 622
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENA--GMYVLLSNLYAAS 622
+++ A ++G + A ++ +M EN L+ LYA S
Sbjct: 623 TSMINANGMHG---CGKDAIDLFSKMTDENVLPDHITFLALLYACS 665
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 233/483 (48%), Gaps = 32/483 (6%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK----ANWEVVSW 219
Y + G A ++FD+M E+ +WN ++ A V GR EA L++ + + ++
Sbjct: 92 YGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTF 151
Query: 220 NSLMG--GFVKQKRLG-DAKWIFDRMPVRDEV-SWNTMITGYAQNNYLAEAQRLFEEAPV 275
++ G K++RLG + + + V N +I YA+ L A+ LF+ +
Sbjct: 152 PCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLM 211
Query: 276 K--DVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMAR 329
+ D +W +++S +V G+ EA +F M E NT ++ + + + + R
Sbjct: 212 EKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGR 271
Query: 330 ELFEAMTCKN----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ + N V N +I YA G++ A +F M DC+SW +++G Q+
Sbjct: 272 GIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQND 331
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
D++ F +M+ G++ ++ ++++ A+L G ++H +K G ++ +GN
Sbjct: 332 MYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGN 391
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+L+ MY KC V+ AFE + +KD+ISW T+IAGYA++ DAL L ++ +
Sbjct: 392 SLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDV 451
Query: 506 DDITMVGILSACS---HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
D + + IL ACS L+++ Y +I N+ +V++ G +D A
Sbjct: 452 DPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNA-----IVNVYGELALVDYA 506
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYA 620
+++ +++ D +W +++ C G LA +A E+ + N + L+S LYA
Sbjct: 507 RHVFESIN-SKDIVSWTSMITCCVHNG---LAIEALELFNSLIETNIEPDLITLVSVLYA 562
Query: 621 ASG 623
A+
Sbjct: 563 AAA 565
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 190/429 (44%), Gaps = 28/429 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ N I + G + A VF SM + VS+N ++SG + N A F M
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344
Query: 119 ---PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYAD 171
+ D VS MI+ R+ +L A + K + S N+++ Y +
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM-------- 223
F+ M EK+ ISW ++A Y QN +A L K E + + +M
Sbjct: 405 YMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLR-KVQLEKMDVDPMMIGSILLAC 463
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
G +K + + + + D + N ++ Y + + A+ +FE KD+ +WT+
Sbjct: 464 SGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTS 523
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
M++ V NG EA +F+++ E N ++ +++ + +E+ + K
Sbjct: 524 MITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKG 583
Query: 340 V----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N+++ YA+ G + +ARN+F+ + Q D I W ++I G +D++ LF
Sbjct: 584 FFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFS 643
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN--ALLVMYCK 453
+M + F ++L C++ + GKQ H +++K ++ + + L+ + +
Sbjct: 644 KMTDENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLAR 702
Query: 454 CGSVEEAYH 462
S+EEAYH
Sbjct: 703 SNSLEEAYH 711
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ ++ L CA+ +L G+QLH +K + F+ + MY KCGS +A F
Sbjct: 46 QQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVF 105
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+++ ++ + +WN MI G +A+ L++ M+ +G+ D T +L AC
Sbjct: 106 DKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERR 165
Query: 525 KGTE-YFYSMNRDYGVIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEP-DAATWGA 580
G E + ++ YG + C ++ + + G L A+ L + E D +W +
Sbjct: 166 LGCEIHGVAVKCGYGGFV----FVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNS 221
Query: 581 LLGA 584
++ A
Sbjct: 222 IISA 225
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 28/280 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRS---------SVSYNAMISGYLLNGQLDP 110
DI W IT + NG AL +FNS+ + SV Y A L G+
Sbjct: 517 DIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIH 576
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ L++ N ++ Y R ++ ARN+F + +RD++ W +M++ +G
Sbjct: 577 GFLIRKGFFLEGLIA-NSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCG 635
Query: 171 DAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACMLFESKAN-WEVVSW----NS 221
A +F +M ++N I++ LL A +G + E FE N +++ W
Sbjct: 636 KDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYAC 695
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ---NNYLAE-AQRLFEEAPVKD 277
L+ + L +A MP+ + G + NN L E A + + ++
Sbjct: 696 LVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTEN 755
Query: 278 VFTWTAMVSGYVQNGK---VDEARMIF--DAMPEKNTVSW 312
+ + + + +G+ V+E R I + + +K SW
Sbjct: 756 SGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSW 795
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 257/760 (33%), Positives = 409/760 (53%), Gaps = 61/760 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG------------- 106
D+ N+ + +++ G AL++F+ MP R++VS+ + GY
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 107 QLDPA-----RQVFDQMPQRDLVSW---NVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+L+P ++F + + ++ W ++ GY N + AA
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA---------------- 186
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA-----CM----LFE 209
+++ Y+ G D+AR +F+ +L K+ + W G+++ YV+NG E++ CM
Sbjct: 187 -LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 210 SKANWEVVSWNSL-MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
+ ++ S+ +G F K G I V D ++ Y Q +++A +
Sbjct: 246 NNYTFDTALKASIGLGAFDFAK--GVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKR 324
+F E P DV W+ M++ + QNG +EA +F M E N + ++++ G K
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 325 MDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ +L + K ++ N +I YA+ ++ A LF + + +SW +I
Sbjct: 364 SGLGEQL-HGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
GY G + +F E R + F+S L CA+LAS++LG Q+HG +K
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
V N+L+ MY KCG ++ A F E+ DV SWN +I+GY+ HG G+ AL + + MK
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
KP+ +T +G+LS CS+ GL+++G E F SM RD+G+ P +HYTCMV LLGR+G+L
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
D+A L++ +P+EP W A+L A E A ++AE I ++ P++ YVL+SN+Y
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A + +W +V+ +R M++ GVKK G SW+E Q VH FSVG + HP+ I LE L
Sbjct: 663 AGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLN 722
Query: 680 FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP-IRVMKNLRVC 738
K + G+V VL D+ +EEK+ L HSE+LA+AYG++ +P+ R I +MKNLR+C
Sbjct: 723 MKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRIC 782
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+A+K IS IV R +++RD NRFHHF G CSCGD+W
Sbjct: 783 SDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 104/268 (38%), Gaps = 49/268 (18%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D DI N I + + D+A+ +F + ++ VS+N +I GY G+ A
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 114 VFDQMPQ---------------------------------------RDLVSWNVMISGYV 134
+F + + + + N +I Y
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNG 190
+ + A+++F M DV SWN ++SGY+ +G A RI D M ++ N +++ G
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+L+ G I++ FES + + ++ + +L A + + +P
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE 615
Query: 246 DEVS-WNTMITGYAQNNYLAEAQRLFEE 272
V W M++ N A+R EE
Sbjct: 616 PSVMIWRAMLSASMNQNNEEFARRSAEE 643
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/522 (42%), Positives = 323/522 (61%), Gaps = 3/522 (0%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMPVRDEVSW 250
+AA V+ G + A F S ++N L+ G+ + RL DA+ +FDR+P D VS+
Sbjct: 24 VAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSY 83
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
NT+++ + + A+RLF PV+DV +W MVSG ++G V+EA+ +F AMP +N+V
Sbjct: 84 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSV 143
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQH 369
SWNAM++G+ ++ M A E F K A W M++GY G + A F+ MP
Sbjct: 144 SWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVR 203
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQL 428
+ +SW A++AGY ++ +++D+LRLF M R + N S +SVL C+NL++L GKQ+
Sbjct: 204 NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI 263
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H +K+ VG +L+ MYCKCG + A F E+ +DV++WN MI+GYA+HG G
Sbjct: 264 HQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDG 323
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A+ LFE MK G++P+ IT V +L+AC HTGL + G F M YG+ P HY+C
Sbjct: 324 KEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSC 383
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLL RAG+L+ A +L+++MPFEP + +G LL ACR+Y E AE AA + E +P++
Sbjct: 384 MVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQS 443
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
AG YV L+N+YA + +W DVS+VR M+D V K GYSW+E++ +H F D LHP+
Sbjct: 444 AGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQL 503
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
I+ L +L ++K G+V VLHDV E K ML H
Sbjct: 504 YLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRH 545
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 191/353 (54%), Gaps = 16/353 (4%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN-GQLDPARQVFDQMPQRDL 123
VA+ +R G A F S PR+++ +YN +++GY G+L AR +FD++P D
Sbjct: 21 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 80
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
VS+N ++S + + AR LF MP RDVVSWNTM+SG +++G + A+ +F M +
Sbjct: 81 VSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR 140
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
N +SWN +++ + + + A F + + V W +++ G++ + A F+ M
Sbjct: 141 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 200
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEA 297
PVR+ VSWN ++ GY +N++ +A RLF EA V+ + T ++++ G +
Sbjct: 201 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 260
Query: 298 RMIFD---AMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
+ I +P +N ++++ Y + + A +LF M ++V +WN MI+GYAQ
Sbjct: 261 KQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQH 320
Query: 354 GEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YG 401
G+ A NLF+RM + + I++ A++ +G + +R F M+ YG
Sbjct: 321 GDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYG 373
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 39/374 (10%)
Query: 13 SCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHM 72
+C+L + +++ RL RHL + P P D +N ++ H
Sbjct: 52 NCLLAGYARALGRLAD-------------ARHLFDR---IPTP----DAVSYNTLLSCHF 91
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
+G D A +F SMP R VS+N M+SG +G ++ A+ VF MP R+ VSWN M+SG
Sbjct: 92 ASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSG 151
Query: 133 YVRNKSLSAARNLFEMMPKR-DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
+ ++ +SAA F P++ D V W M+SGY G A F+ M +N +SWN +
Sbjct: 152 FACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAV 211
Query: 192 LAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMP 243
+A YV+N ++A LF E+ + +S++ G LG K I ++P
Sbjct: 212 VAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLP 271
Query: 244 V-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ R+ ++++ Y + L+ A +LF E +DV W AM+SGY Q+G EA +F+
Sbjct: 272 LSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFE 331
Query: 303 AMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQS 353
M E N +++ A++ + T D FE M V ++ M+ ++
Sbjct: 332 RMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRA 391
Query: 354 GEITHARNLFDRMP 367
G++ A +L MP
Sbjct: 392 GKLERAVDLIRSMP 405
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 191/376 (50%), Gaps = 26/376 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A H+F+ +P +VSYN ++S + +G D AR++F MP RD+VSWN M+SG ++ ++
Sbjct: 68 ARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAV 127
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE-ISWNGLLAAYVQN 198
A+ +F MP R+ VSWN M+SG+A + AA F EK + + W +++ Y+
Sbjct: 128 EEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDI 187
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN-----TM 253
G + +A FE+ +VSWN+++ G+VK DA +F M V N ++
Sbjct: 188 GNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSV 247
Query: 254 ITGYAQNNYLAEAQRLFE---EAPV-KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
+ G + + L +++ + + P+ +++ T++VS Y + G + A +F M ++
Sbjct: 248 LLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDV 307
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMI---TGYAQSGEITHARNLFDR 365
V+WNAMI+GY Q A LFE M + V +W T + T +G F+
Sbjct: 308 VAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEG 367
Query: 366 M-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
M P+ D ++ ++ ++G E ++ L M + S + ++L+ C
Sbjct: 368 MQELYGIEPRVD--HYSCMVDLLCRAGKLERAVDLIRSMPF---EPHPSAYGTLLAACRV 422
Query: 419 LASLELGKQLHGQLVK 434
+LE + G+L++
Sbjct: 423 YKNLEFAELAAGKLIE 438
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 154/317 (48%), Gaps = 25/317 (7%)
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT-KRMDMARELFEAMTCKNV 340
T V+ V+ G + A F + P K T ++N ++AGY + R+ AR LF+ + +
Sbjct: 21 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 80
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
S+NT+++ + SG+ AR LF MP D +SW +++G ++SG E++ +F+ M
Sbjct: 81 VSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAM--- 137
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHG--QLVKVGFEAG-CFVGNALLVMYCKCGSV 457
P + +S A ++ + + + + E G + A++ Y G+V
Sbjct: 138 -------PVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNV 190
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSA 516
+A FE + ++++SWN ++AGY ++ DAL LF +M + ++P+ T+ +L
Sbjct: 191 VKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLG 250
Query: 517 CSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTC---MVDLLGRAGRLDEAQNLMKNMPFE 572
CS+ + G + + + M +P S++ T +V + + G L A L M
Sbjct: 251 CSNLSALGFGKQIHQWCMK-----LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM-HT 304
Query: 573 PDAATWGALLGACRLYG 589
D W A++ +G
Sbjct: 305 RDVVAWNAMISGYAQHG 321
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 20/193 (10%)
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH-GFGKDALMLFESMK 499
C + + + G + A AF K ++N ++AGYAR G DA LF+ +
Sbjct: 17 CSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIP 76
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
T PD ++ +LS +G + F SM + + + MV L ++G +
Sbjct: 77 T----PDAVSYNTLLSCHFASGDADGARRLFASMP-----VRDVVSWNTMVSGLSKSGAV 127
Query: 560 DEAQNLMKNMPFEPDAATWGALLG--ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
+EA+ + MP ++ +W A++ AC AAE F PE G VL +
Sbjct: 128 EEAKAVFLAMPVR-NSVSWNAMVSGFAC------SRDMSAAEEWFRNAPEK-GDAVLWTA 179
Query: 618 LYAASGRWGDVSK 630
+ + G+V K
Sbjct: 180 MVSGYMDIGNVVK 192
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/686 (33%), Positives = 396/686 (57%), Gaps = 36/686 (5%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK--- 183
N +++ Y ++ +++ A+ LF+ +P+R+ +W ++SG+A+ G ++ +F M K
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 184 -NEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
N+ + + +L +Q G+ A ML + + +VV NS++ ++K K A+
Sbjct: 388 PNQYTLSSVLKCCSLDNNLQLGKGVHAWML-RNGIDVDVVLGNSILDLYLKCKVFEYAER 446
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG----K 293
+F+ M D VSWN MI Y + + ++ +F P KDV +W +V G +Q G
Sbjct: 447 LFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHA 506
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMIT 348
+++ + + E + V+++ + +++ R+L M K + ++++
Sbjct: 507 LEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQL-HGMVLKFGFDSDGFIRSSLVE 565
Query: 349 GYAQSGEITHARNLFD----------------RMPQHDCISWAAIIAGYAQSGYSEDSLR 392
Y + G + A + + P+ +SW ++++GY +G ED L+
Sbjct: 566 MYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLK 625
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
F M R ++ T+++S CAN LE G+ +H + K+G +VG++L+ MY
Sbjct: 626 TFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYS 685
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
K GS+++A+ F + + +++ W +MI+GYA HG G A+ LFE M GI P+++T +G
Sbjct: 686 KSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLG 745
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+L+ACSH GL+E+G YF M Y + P +H T MVDL GRAG L + +N +
Sbjct: 746 VLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGIS 805
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
+ W + L +CRL+ E+ + +E++ ++ P + G YVLLSN+ A++ RW + ++VR
Sbjct: 806 HLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVR 865
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTK 692
M RGVKK G SW+++++++HTF +GD HP+ D IY+YL+ L +LK+ G+ + K
Sbjct: 866 SLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVK 925
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
LV+ DV EE+ E ++ +HSEKLAV +GI++ PIR++KNLR+C DCHN IK+ S+++
Sbjct: 926 LVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLL 985
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD +RFHHF GSCSCGDYW
Sbjct: 986 DREIIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 178/410 (43%), Gaps = 48/410 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL----LNGQLDPARQVF 115
+ + W + I+ R G + ++F M + + +S L L+ L + V
Sbjct: 354 NTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVH 413
Query: 116 DQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
M + D+V N ++ Y++ K A LFE+M + DVVSWN M+ Y + G +
Sbjct: 414 AWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVE 473
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNG----RIEEACMLFESKANWEVVSWNS--LMGG 225
+ +F R+ K+ +SWN ++ +Q G +E+ + E + V+++ ++
Sbjct: 474 KSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILAS 533
Query: 226 FVKQKRLGDA------KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV---- 275
+ LG K+ FD D ++++ Y + + +A + + P+
Sbjct: 534 SLSHVELGRQLHGMVLKFGFD----SDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLR 589
Query: 276 ------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV----SWNAMIAGY 319
+ +W +MVSGYV NGK ++ F M + V + +I+
Sbjct: 590 KGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC 649
Query: 320 VQTKRMDMAREL--FEAMTCKNVASW--NTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
++ R + + + ++ +++I Y++SG + A +F + + + + W
Sbjct: 650 ANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWT 709
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
++I+GYA G ++ LF EM G N F VL+ C++ +E G
Sbjct: 710 SMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEG 759
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 181/423 (42%), Gaps = 50/423 (11%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + +++ + A +F M VS+N MI YL G ++ + +F +
Sbjct: 422 DVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRR 481
Query: 118 MPQRDLVSWNVMISGYVR----NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+P +D+VSWN ++ G ++ +L + E + V+++ L + + +
Sbjct: 482 LPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELG 541
Query: 174 RRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLF------------------ESK 211
R++ +L + + + L+ Y + GR+++A ++ E K
Sbjct: 542 RQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPK 601
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN----TMITGYAQNNYLAEAQ 267
A +VSW S++ G+V + D F R+ VR+ V + T I N + E
Sbjct: 602 AG--IVSWGSMVSGYVWNGKYEDGLKTF-RLMVRELVVVDIRTVTTIISACANAGILEFG 658
Query: 268 RLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
R K D + ++++ Y ++G +D+A M+F E N V W +MI+GY
Sbjct: 659 RHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALH 718
Query: 323 KRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS----- 373
+ A LFE M N ++ ++ + +G I F M CI+
Sbjct: 719 GQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEH 778
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
+++ Y ++G+ + + G S + S LS+C ++E+GK + L+
Sbjct: 779 CTSMVDLYGRAGHLTKTKNFIF---KNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLL 835
Query: 434 KVG 436
+V
Sbjct: 836 QVA 838
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 268/738 (36%), Positives = 387/738 (52%), Gaps = 63/738 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
NAM+S + G+ A +VF +MP+RD+ SWNVM+ GY + L A +L+ M +
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGAR 192
Query: 152 RDVVSW-----------------------------------NTMLSGYAQNGYADAARRI 176
DV ++ N +++ YA+ G +AAR++
Sbjct: 193 PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKV 252
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLF------ESKANWEVVSWNSLMGGFVKQK 230
FD M + ISWN ++A + +N E LF E + N ++ ++ G +
Sbjct: 253 FDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD- 311
Query: 231 RLGDAKWI----FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
L AK I R D N++I Y+ + EA +F +D +WTAM+S
Sbjct: 312 -LDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK-----RMDMARELFEAMTCKNVA 341
GY +NG D+A ++ A+ E N VS + + R+D+ +L E T K
Sbjct: 371 GYEKNGFPDKALEVY-ALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFI 429
Query: 342 SW----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+ N ++ YA+S I A +F MP D ISW+++IAG+ + + ++L F M
Sbjct: 430 RYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM 489
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+ N F + L+ CA SL GK++H +++ G + +V NALL +Y KCG
Sbjct: 490 LA-DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQT 548
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A+ F KDV+SWN M+AG+ HG G AL F M G PD++T V +L C
Sbjct: 549 GYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGC 608
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
S G+V +G E F+SM Y ++PN KHY CMVDLL R GRL E N + MP PDAA
Sbjct: 609 SRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAV 668
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
WGALL CR++ EL E AA+++ E+EP +AG +VLLS+LYA +G W +VSKVR MR
Sbjct: 669 WGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRV 728
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD 697
+G++ G SW+EV+ +H F D HP+ I L+ + ++K GF L D
Sbjct: 729 KGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLED 788
Query: 698 VGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
E K+ +L HSE+LAVA+G+++ G I V KN CE CH ++ ISKIV R I
Sbjct: 789 -KEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREIT 847
Query: 758 LRDNNRFHHFSGGSCSCG 775
+RD FHHF GSCSCG
Sbjct: 848 VRDTKEFHHFRDGSCSCG 865
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/500 (43%), Positives = 308/500 (61%), Gaps = 4/500 (0%)
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
T A + GY G+V +AR +FD MP ++TVS+N+MI GY + + A+ LFE +
Sbjct: 48 TNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPT 107
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
+W +M+ G+ ++G++ AR +F+ MP+ D +SW A+I+G + ++L LF M
Sbjct: 108 PVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMME 167
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G NR SVLS C +LE GK +H + K F+G AL+ MY KCG+VE
Sbjct: 168 EGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVEL 227
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACS 518
A F + ++ +WN MI G A +G+ AL +F M+ G + PD++T VG+L ACS
Sbjct: 228 ALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACS 287
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H G V+ G E+FY++ + YGV +HY CMVDLL R+G L EA L+ MP +PD W
Sbjct: 288 HAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVW 347
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
ALLG CRL+ ++AE VI EME +G +VLLSNLYAA GRW V VR MR +
Sbjct: 348 RALLGGCRLHKNVKMAEN---VISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSK 404
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
G++K+ G S +E+ +H F GD HP D I+A L E+ +++Q G+V T V +D+
Sbjct: 405 GIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDI 464
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+EEKE L YHSEKLA+A+G++ P IR++KNLR C DCH+ K +SKI R I++
Sbjct: 465 EDEEKEQALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVV 524
Query: 759 RDNNRFHHFSGGSCSCGDYW 778
RD RFHHF GG+CSC D+W
Sbjct: 525 RDRARFHHFRGGACSCNDFW 544
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 42/308 (13%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
N+ + G+ R+ DA+ +FD MP RD VS+N+MI GYA + + AQRLFE
Sbjct: 50 NAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPV 109
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---- 335
TWT+MV+G+ + G V+ AR +F+ MPE++ VSWNAMI+G V + A LF M
Sbjct: 110 TWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEG 169
Query: 336 -------------TCKNVASWNT----------------------MITGYAQSGEITHAR 360
C + T ++ YA+ G + A
Sbjct: 170 FVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELAL 229
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSPFTSVLSTCANL 419
+F + + +W A+I G A +GYS +L +F +M+ G + F VL C++
Sbjct: 230 EVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHA 289
Query: 420 ASLELGKQ-LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNT 477
++ GK+ + K G E ++ + + G ++EA+ E+ K DV+ W
Sbjct: 290 GFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRA 349
Query: 478 MIAGYARH 485
++ G H
Sbjct: 350 LLGGCRLH 357
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 152/333 (45%), Gaps = 40/333 (12%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR 121
R N I + G A VF+ MPRR +VS+N+MI GY ++G + A+++F+++
Sbjct: 47 RTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAP 106
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
V+W M++G+ R + +AR +FE MP+RD+VSWN M+SG N A +F M+
Sbjct: 107 TPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMM 166
Query: 182 EKNEISWNG----LLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLG 233
E+ + G +L+A G +E + + + W+ +L+ + K +
Sbjct: 167 EEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVE 226
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGY 288
A +F + R+ +WN MI G A N Y A+A +F + + D T+ ++
Sbjct: 227 LALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLAC 286
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
G VD + F +P+K V + E C M+
Sbjct: 287 SHAGFVDAGKEHFYTIPQKYGVEL------------------ILEHYAC--------MVD 320
Query: 349 GYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
A+SG + A L MP + D + W A++ G
Sbjct: 321 LLARSGHLQEAHKLITEMPMKPDVVVWRALLGG 353
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 44/186 (23%)
Query: 403 RLNRSPFTSVLSTCANLASLELGKQL---HGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
RLN+ F S+L + A+ + L H K+GF NA + YC G V +
Sbjct: 5 RLNQQTFLSLLKSAASASPSAYSHHLPSLHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTD 64
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F+ + +D +S+N+MI GYA G A LFE + + P +T
Sbjct: 65 ARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERV----LAPTPVT---------- 110
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+T MV RAG ++ A+ + + MP E D +W
Sbjct: 111 --------------------------WTSMVAGFCRAGDVESARRVFEEMP-ERDLVSWN 143
Query: 580 ALLGAC 585
A++ C
Sbjct: 144 AMISGC 149
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WD + + + G + AL VF + R++ ++NAMI+G +NG A +F QM
Sbjct: 207 WDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQM 266
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
V+ D V++ +L + G+ DA + F
Sbjct: 267 ELNGTVA--------------------------PDEVTFVGVLLACSHAGFVDAGKEHFY 300
Query: 179 RMLEKNEIS-----WNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFVKQKRL 232
+ +K + + ++ ++G ++EA L E +VV W +L+GG K +
Sbjct: 301 TIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNV 360
Query: 233 GDAKWIFDRM 242
A+ + M
Sbjct: 361 KMAENVISEM 370
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/538 (41%), Positives = 318/538 (59%), Gaps = 39/538 (7%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG-------------YVQTKR 324
+F ++VS Y + G +D+A +F MP++N VSW ++A ++ R
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166
Query: 325 MD------------------------MARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
D M ++ + +V +++I Y + G++ R
Sbjct: 167 RDGVAANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGR 226
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+FD M D + W +IIAG+AQSG ++ LF+ MK G N+ TSVL C +
Sbjct: 227 GVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMV 286
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
LE+G+Q+H ++K ++ + NALL MYCKCG + +A F + D+DVISW+TMI+
Sbjct: 287 MLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMIS 344
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G A++G +AL +F+ MK G P++ITMVG+L ACSH GLVE G YF SM++ +G+
Sbjct: 345 GLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQ 404
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P +H CMVDLLGRAG+LDEA + M FEPD+ W LLGACR++ LA AA
Sbjct: 405 PEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATE 464
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
I ++EPE+ G +LLSN+YA +W + K MRD+GVKK G SW+E+ VH F
Sbjct: 465 ILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIA 524
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
G+ HP DRI L L + K G+V T+ VL D+G E+KE +L+YHSEKLA+A+G
Sbjct: 525 GELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGT 584
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++ G+P+R+MKNLR+C DCH K +SK G+ II+RD RFHHF G CSCGDYW
Sbjct: 585 MNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 151/343 (44%), Gaps = 67/343 (19%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN--GQLDPARQVFDQMPQRD 122
N ++ + + G D AL +F MP+R+ VS+ +++ L N G+ A + +M +RD
Sbjct: 111 NSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAA-LANAPGRKKEALRFLVEM-RRD 168
Query: 123 LVSWNV-------------------------------------MISGYVRNKSLSAARNL 145
V+ N +I Y++ L + R +
Sbjct: 169 GVAANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGV 228
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN------- 198
F+ M D+V WN++++G+AQ+G A +F RM E ++ G L + ++
Sbjct: 229 FDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVML 288
Query: 199 --GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
GR A +L K + +++ N+L+ + K L DA +F RM RD +SW+TMI+G
Sbjct: 289 EVGRQVHAHVL---KYDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISG 345
Query: 257 YAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------P 305
AQN EA ++F+ E P + T ++ G V++ F +M P
Sbjct: 346 LAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQP 405
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
E+ N M+ + ++D A + M + + W T++
Sbjct: 406 EREHC--NCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLL 446
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 31/264 (11%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+++I Y+ G LD R VFD+M DLV WN +I+G+ ++ A LF M + +
Sbjct: 210 SSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFL 269
Query: 156 SWNTMLSGY--AQNGYA--DAARRIFDRML--EKNEISWNGLLAAYVQNGRIEEACMLFE 209
+ L+ A G + R++ +L +++ I N LL Y + G + +A LF
Sbjct: 270 ANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDRDLILHNALLDMYCKCGCLLDADALFS 329
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG--YAQN------- 260
+ +V+SW++++ G + R +A +FD M N + G +A +
Sbjct: 330 RMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVED 389
Query: 261 --NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSW----- 312
+Y +LF P ++ MV + GK+DEA M E ++V W
Sbjct: 390 GWHYFRSMDKLFGIQPERE--HCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLG 447
Query: 313 ------NAMIAGYVQTKRMDMARE 330
NA +A Y T+ + + E
Sbjct: 448 ACRMHKNATLASYAATEILKLEPE 471
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 47/244 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + I +M+ G DS VF+ M V +N++I+G+ +G A ++F +
Sbjct: 203 DSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMR 262
Query: 118 MPQ-------------------------------------RDLVSWNVMISGYVRNKSLS 140
M + RDL+ N ++ Y + L
Sbjct: 263 MKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDRDLILHNALLDMYCKCGCLL 322
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
A LF M RDV+SW+TM+SG AQNG + A ++FD M + N I+ G+L A
Sbjct: 323 DADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACS 382
Query: 197 QNGRIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDA-KWIFDRMPVRDEVSW 250
G +E+ F S E N ++ + +L +A K+I + D V W
Sbjct: 383 HAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIW 442
Query: 251 NTMI 254
T++
Sbjct: 443 RTLL 446
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL------VKVGFEAGCFV 443
+L L ++ G R + ++ C ++ G+ +H + FV
Sbjct: 50 ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH-GFGKDALMLFESMKTVG 502
N+L+ MY K G +++A F + ++V+SW T++A A G K+AL M+ G
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+ + T +L AC G++ + D V S ++D + G LD
Sbjct: 170 VAANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSS----LIDAYMKLGDLDSG 225
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYA 620
+ + M D W +++ + ++ A E+ M+ A L S L A
Sbjct: 226 RGVFDEM-VTCDLVVWNSIIAG---FAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRA 281
Query: 621 ASG 623
+G
Sbjct: 282 CTG 284
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/565 (38%), Positives = 345/565 (61%), Gaps = 8/565 (1%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--- 278
L+ + +R+ DA+ +FD+M D V+WN +I GY QN + +A RLFE+ D+
Sbjct: 162 LIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPD 221
Query: 279 -FTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFE 333
++S G + R I + + + ++ A+I Y MD+AR++++
Sbjct: 222 SVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYD 281
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
++ K++ M++GYA+ G + AR +FD+M + D + W+A+I+GYA+S +++L+L
Sbjct: 282 GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKL 341
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM + ++ SV+S C+++ +L +H + + GF V NAL+ MY K
Sbjct: 342 FDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAK 401
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG++ +A FE + K+VISW++MI +A HG A+ LF MK V I+P+ +T +G+
Sbjct: 402 CGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGV 461
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L AC H GLVE+G + F SM ++G+ P +HY CMVDL RA L +A L++ MPF P
Sbjct: 462 LYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAP 521
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+ WG+L+ AC+++G+ EL E AA+ + E+EP++ G V+LSN+YA RW DV +R
Sbjct: 522 NVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRK 581
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M +G+ K S +E+ N+VH F + D H + D IY L+E+ KLK G+ ST
Sbjct: 582 SMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSG 641
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
+L D+ EE+K+ ++ +HSEKLAV YG++S IR++KNLR+CEDCH+ +K +SK+
Sbjct: 642 ILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQ 701
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
I++RD RFHH SGG CSC DYW
Sbjct: 702 IEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 214/495 (43%), Gaps = 111/495 (22%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-- 246
GL+A Y RI +A +LF+ + + V+WN ++ G+ + DA +F+ M D
Sbjct: 160 TGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMK 219
Query: 247 -----------------EVSWNTMI------TGYAQNNYLAE--------------AQRL 269
+S+ I GYA +++L A+++
Sbjct: 220 PDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKI 279
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
++ K + TAM+SGY + G V +AR IFD M E++ V W+AMI+GY ++ + A
Sbjct: 280 YDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEAL 339
Query: 330 ELFEAM-----------------TCKNV-----ASW-----------------NTMITGY 350
+LF+ M C +V A+W N +I Y
Sbjct: 340 KLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMY 399
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A+ G + AR +F+ MP+ + ISW+++I +A G ++ +++LF MK N F
Sbjct: 400 AKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFI 459
Query: 411 SVLSTCANLASLELGKQLHGQLV-KVGFEA-----GCFVGNALLVMYCKCGSVEEAYHAF 464
VL C + +E G++L ++ + G GC V +YC+ + +A
Sbjct: 460 GVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVD-----LYCRANFLRKAIELI 514
Query: 465 EEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC------ 517
E + +VI W ++++ HG + L F + + + ++PD + +LS
Sbjct: 515 ETMPFAPNVIIWGSLMSACQVHGEAE--LGEFAAKRLLELEPDHDGALVVLSNIYAKEKR 572
Query: 518 -SHTGLVEKGTEYFYSMNRDYGV----IPNSKHYTCMVDLLGRAG-----RLDEAQNLMK 567
+ GL+ K Y ++++ I N H M D + +LDE + +K
Sbjct: 573 WNDVGLIRKSMSY-KGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLK 631
Query: 568 NMPFEPDAATWGALL 582
+ ++P +T G L+
Sbjct: 632 LVGYKP--STSGILI 644
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 148/298 (49%), Gaps = 24/298 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
A+I+ Y G +D AR+++D + + L+ M+SGY + + AR +F+ M +RD+V
Sbjct: 261 TALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLV 320
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA----CML 207
W+ M+SGYA++ A ++FD ML+K ++I+ +++A G + +A +
Sbjct: 321 CWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYV 380
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
S + N+L+ + K L A+ +F+ MP ++ +SW++MI +A + A
Sbjct: 381 DRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAI 440
Query: 268 RLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAG 318
+LF ++ T+ ++ G V+E +F +M ++ +S + M+
Sbjct: 441 KLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDL 500
Query: 319 YVQTKRMDMARELFEAMT-CKNVASWNTMIT-----GYAQSGEITHARNLFDRMPQHD 370
Y + + A EL E M NV W ++++ G A+ GE A+ L + P HD
Sbjct: 501 YCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFA-AKRLLELEPDHD 557
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 169/369 (45%), Gaps = 28/369 (7%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL----VSWNVMISGYVRNKS 138
+F+ M +V++N +I GY NG D A ++F+ M D+ V ++S +
Sbjct: 178 LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237
Query: 139 LSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
LS R + E + D +++ YA G D AR+I+D + K+ I +L+
Sbjct: 238 LSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG 297
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSW 250
Y + G +++A +F+ ++V W++++ G+ + + +A +FD M V D+++
Sbjct: 298 YAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITM 357
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++I+ + LA+A + + + A++ Y + G + +AR +F+ MP
Sbjct: 358 LSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPR 417
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG--YA--QSGEITHARNL 362
KN +SW++MI + D A +LF M N+ G YA +G + L
Sbjct: 418 KNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKL 477
Query: 363 FDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
F M IS + ++ Y ++ + ++ L IE + N + S++S C
Sbjct: 478 FSSMINEHGISPTREHYGCMVDLYCRANFLRKAIEL-IETMPFAP--NVIIWGSLMSACQ 534
Query: 418 NLASLELGK 426
ELG+
Sbjct: 535 VHGEAELGE 543
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 146/316 (46%), Gaps = 16/316 (5%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLA 420
+F ++P ++ ++S + E ++ L+ ++ L+R F S+L + ++
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+ G ++HG K+GF F+ L+ MY C + +A F+++ D ++WN +I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GY ++G DAL LFE M++ +KPD + + +LSAC H G + G + +D G
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYG-RTIHEFVKDNGYA 254
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
+S T ++++ G +D A+ + + + + L G Y K + + A +
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG----YAKLGMVKDARFI 310
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK------VTGYSWLEVQNK 654
+M + + + + YA S D + LK+ D ++K +T S + +
Sbjct: 311 FDQMIERDLVCWSAMISGYAES----DQPQEALKLFDEMLQKRSVPDQITMLSVISACSH 366
Query: 655 VHTFSVGDTLHPEKDR 670
V + + +H DR
Sbjct: 367 VGALAQANWIHTYVDR 382
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/567 (38%), Positives = 343/567 (60%), Gaps = 10/567 (1%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN----YLAEAQRLFEEAPVK- 276
L+ + + L DA+ FD P RD ++ ++ + ++ L +R+ + ++
Sbjct: 42 LVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALRP 101
Query: 277 DVFTWTAMVSGYVQNGKVDEARMI---FDAMP-EKNTVSWNAMIAGYVQTKRMDMARELF 332
D F ++ S + + R + F A P + V +++I Y + AR++F
Sbjct: 102 DHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVF 161
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+++ KN W +I+GYA +G A +LF MP H +W A+I+G+ ++G ++
Sbjct: 162 DSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMG 221
Query: 393 LFIEMKRYGERLNRS-PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF+EM+R R++ + +V+ A+LA+L LG+QLHG ++++GF + VGNAL+ MY
Sbjct: 222 LFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMY 281
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KC + A FE I +DVISW T++ G A+HG ++ L+ M G+KP+++T V
Sbjct: 282 SKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFV 341
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G++ ACSH GLV+KG + F SM R+YG+ P +HYTC +DLL R+G L EA+ L+ MP+
Sbjct: 342 GLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPY 401
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
EPD ATWGALL AC+ + T++ + A+ + E+ P++ Y+LLSN+YA + +W V+KV
Sbjct: 402 EPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKV 461
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R M + ++KV GYSW+E + F G+ + I +LEEL ++++ G+V T
Sbjct: 462 RKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDT 521
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
V+HD+ E EKE L HSE+LAVA+GIL P G IRV+KNLRVC DCH +K IS I
Sbjct: 522 SSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISAI 581
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD +RFHHF G+CSC ++W
Sbjct: 582 AQRKIIVRDASRFHHFEDGNCSCSEFW 608
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 190/408 (46%), Gaps = 22/408 (5%)
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
+++S Y R+ L AR F+ P+RD+ ++ +L+ + + + + RML + +
Sbjct: 41 LLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALR 100
Query: 188 WNGLLAAYVQN--GRIEEACMLFESKANWEVVSW-------NSLMGGFVKQKRLGDAKWI 238
+ + A + + GR+ + + A++ + +SL+ + K DA+ +
Sbjct: 101 PDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKV 160
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEAR 298
FD + V++ V W +I+GYA N EA LF+ P +FTWTA++SG+V+ G A
Sbjct: 161 FDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAM 220
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMA-----RELFEAMT----CKNVASWNTMITG 349
+F M + +A + V D+A R+L + ++ N ++
Sbjct: 221 GLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDM 280
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y++ +I AR +F+ + D ISW I+ G AQ G +E+ L+ M G + N F
Sbjct: 281 YSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTF 340
Query: 410 TSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI- 467
++ C++ ++ G+QL + + G + G L + + G + EA +
Sbjct: 341 VGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMP 400
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ D +W +++ +H + L + +++ + ++P D + +LS
Sbjct: 401 YEPDEATWGALLSACKKHNDTQMCLRVADNL--LELRPKDPSTYILLS 446
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 162/388 (41%), Gaps = 65/388 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA-------RQVFDQMPQ 120
++ + R+ A F+ PRR Y+A+++ ++ DP R + D +
Sbjct: 43 VSAYARSCLLPDARRAFDDAPRRDLHLYSALLAA--VSHSSDPELVLPLLRRMLSDDALR 100
Query: 121 RDLVSWNVMISGYVRNKSLSAARNL---FEMMP-KRDVVSWNTMLSGYAQNGYADAARRI 176
D + S R +SL R L F P D V ++++ Y + G AR++
Sbjct: 101 PDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKV 160
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
FD + KN + W L++ Y NG EA LF+S + +W +L+ GFVK A
Sbjct: 161 FDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAM 220
Query: 237 WIF-----DRMPVRDEVSWNTMITG----------------------------------- 256
+F D + + D T+I G
Sbjct: 221 GLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDM 280
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMPEKNTVS 311
Y++ + + A+ +FE V+DV +WT ++ G Q+G+ +E RM+ M + N V+
Sbjct: 281 YSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGM-KPNEVT 339
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRM 366
+ +I + R+LF++M + V + + ++SG ++ A L M
Sbjct: 340 FVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTM 399
Query: 367 P-QHDCISWAAIIAGYAQSGYSEDSLRL 393
P + D +W A+++ + ++ LR+
Sbjct: 400 PYEPDEATWGALLSACKKHNDTQMCLRV 427
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 55/297 (18%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W I+ + NGC AL +F SMP ++ A+ISG++ G A +F +M + D+
Sbjct: 172 WTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDI 231
Query: 124 ----------------------------------------VSWNVMISGYVRNKSLSAAR 143
+ N ++ Y + + +AR
Sbjct: 232 RIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAR 291
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNG 199
+FE + RDV+SW T+L G AQ+G A+ +++RML + NE+++ GL+ A G
Sbjct: 292 EVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAG 351
Query: 200 RIEEACMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTM 253
+++ LF+S V + + + L +A+ + MP DE +W +
Sbjct: 352 LVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGAL 411
Query: 254 ITGYAQNN----YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++ ++N L A L E P KD T+ + + Y N K D + M E
Sbjct: 412 LSACKKHNDTQMCLRVADNLLELRP-KDPSTYILLSNVYAVNCKWDSVAKVRKIMAE 467
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 275/817 (33%), Positives = 412/817 (50%), Gaps = 100/817 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPR-RSSVSYNAMISGYLLNGQLD---PARQVF 115
++ W + NG + AL + M R R + + NA + L G L+ QVF
Sbjct: 109 NVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVF 168
Query: 116 DQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ QR + N +IS + A LF M +RD VSWN ++S Y+ G
Sbjct: 169 SHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCS 228
Query: 172 AARRIFDRM-----LEKNEISWNGLLAA-----YVQNGR-IEEACMLFESKANWEVVSWN 220
+ R+F M L + + L++ YV G + C+ + VV N
Sbjct: 229 KSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVV--N 286
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------EEAP 274
+L+ + +L DA+++F M RD +SWNTMI+ Y QN +A + E P
Sbjct: 287 ALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGP 346
Query: 275 VKDVFT---------------------------------WTAMVSGYVQNGKVDEARMIF 301
+ F+ ++++ Y + +++A IF
Sbjct: 347 DRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIF 406
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELF----------EAMTCKNVASW-------- 343
MP + VS N +I Y + A ++F +T N+
Sbjct: 407 QLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLR 466
Query: 344 ----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
N++IT YA+ G++ + N+F R+ +SW A+IA
Sbjct: 467 NYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAAN 526
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
Q G+ E+SL+LF++M+ G L+ +S+ A+LASLE G QLHG +K G
Sbjct: 527 VQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDS 586
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
V NA + MY KCG ++E + + WNT+I+GYAR+G+ K+A F+ M +V
Sbjct: 587 HVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISV 646
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G PD +T V +LSACSH GLV+KG +Y+ SM+ +GV P KH C+VD+LGR GR E
Sbjct: 647 GRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAE 706
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A+ +++MP P+ W +LL + R + ++ KAA+ + E++P + YVLLSNLYA
Sbjct: 707 AEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYAT 766
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
S RW DV +VR M+ + K+ SWL+ + +V TF +GD H D+IY L+E+ K
Sbjct: 767 SARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLK 826
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
L++ G+V T LHD EE+KE L HSEKLA+AYG++++P G +R+ KNLRVC DC
Sbjct: 827 LREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADC 886
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H K +S + R I+LRD RFHHF GGSCSC D+W
Sbjct: 887 HLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 147/589 (24%), Positives = 252/589 (42%), Gaps = 98/589 (16%)
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
Y K + A+ LF MP+R+VVSW ++ + NG+ + A + RM + I+ N
Sbjct: 89 YGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRM-RRERIACNANA 147
Query: 193 AAYVQN--GRIEEACM-------LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
A V + G +E+ + S +V NSL+ R+ DA+ +F RM
Sbjct: 148 FATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRME 207
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEE--------------------APVKDVFTW-- 281
RD VSWN +++ Y+ +++ R+F + D ++
Sbjct: 208 ERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGS 267
Query: 282 ------------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT- 322
A+V+ Y GK+ +A +F M ++ +SWN MI+ YVQ
Sbjct: 268 GVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNG 327
Query: 323 KRMDMAREL---------------------------------FEAMTCK-----NVASWN 344
MD + L AMT + N+ N
Sbjct: 328 NNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGN 387
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++IT Y + I A +F MP HD +S +I YA ++++F M+R +L
Sbjct: 388 SLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKL 447
Query: 405 NRSPFTSVLSTCANLASLE-LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N ++L + + L G LH + GF + +V N+L+ MY KCG +E + +
Sbjct: 448 NYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNV 507
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+ I+++ V+SWN MIA +HG G+++L LF M+ G D I + +S+ + +
Sbjct: 508 FQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASL 567
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E+G + + + G+ +S +D+ G+ G++DE ++ + P W L+
Sbjct: 568 EEGMQ-LHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQC-WNTLIS 625
Query: 584 ACRLYGKTELAEKAAEVIFEM--EPENAGMYVLLSNLYAASGRWGDVSK 630
YG + AE+ + + + P+ YV L +A G V K
Sbjct: 626 GYARYGYFKEAEETFKHMISVGRTPD----YVTFVTLLSACSHAGLVDK 670
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 214/475 (45%), Gaps = 29/475 (6%)
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
+L Y + A+R+F M E+N +SW L+ A NG +EEA + + + E +
Sbjct: 83 TALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEA-LGYYRRMRRERI 141
Query: 218 SWN--------SLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAE 265
+ N SL G + +F + V R N++I+ + +
Sbjct: 142 ACNANAFATVVSLCGSLEDEVA---GLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHD 198
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA-----MIAGYV 320
A++LF +D +W A+VS Y G ++ +F M + +A +I+
Sbjct: 199 AEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCA 258
Query: 321 QTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
+ + + + S+ N ++ Y+ +G++ A LF M + D ISW
Sbjct: 259 SSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNT 318
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I+ Y Q+G + D+L+ ++ E +R F+S L C++ +L G+ +H +++
Sbjct: 319 MISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLS 378
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
VGN+L+ MY KC S+E+A F+ + + DV+S N +I YA G A+ +F
Sbjct: 379 LHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFF 438
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M+ +K + IT+V IL + + + + ++ G + + ++ + +
Sbjct: 439 WMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKC 498
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
G L+ + N+ + + +W A++ A +G E++ ++ +M + G+
Sbjct: 499 GDLESSNNVFQRI-INRSVVSWNAMIAANVQHGH---GEESLKLFMDMRHDGNGL 549
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 146/315 (46%), Gaps = 12/315 (3%)
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIAGYVQTKRMDMAREL---FEAM 335
+W +SG V+ G+ A + M E+ +S A+ + +R + R A+
Sbjct: 10 SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHAL 69
Query: 336 TCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
T K NV ++ Y + A+ LF MP+ + +SW A++ + +G+ E++
Sbjct: 70 TQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEA 129
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L + M+R N + F +V+S C +L G Q+ ++ G + V N+L+ M
Sbjct: 130 LGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISM 189
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDIT 509
G V +A F + ++D +SWN +++ Y+ G + +F M+ G ++ D T
Sbjct: 190 LGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATT 249
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ ++S C+ + V G+ +S+ G+ +V++ AG+L +A+ L NM
Sbjct: 250 LCSLISVCASSDYVSYGSG-VHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNM 308
Query: 570 PFEPDAATWGALLGA 584
D +W ++ +
Sbjct: 309 S-RRDLISWNTMISS 322
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/547 (40%), Positives = 324/547 (59%), Gaps = 15/547 (2%)
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
R ++ N +++ YA+ L EA+ +F + V +W+AM+ Y +G+ EA ++F M
Sbjct: 18 RATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRM 77
Query: 305 PEKNTVSWNAMI-------AGYVQTKRMDMARELFE------AMTCKNVASWNTMITGYA 351
V NAM G ++ ++ RE+ + N N ++ Y
Sbjct: 78 RNDGRVEPNAMTFTGVFNACGVIED--LEQGREIHALAMASGELKSSNAILENALLNMYV 135
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G + AR +FD M D SW ++I ++ ++L LF M G S
Sbjct: 136 RCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLAS 195
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
VL+ CA +L++GKQ+H +L GF + ALL MY KCGS+E + F + ++
Sbjct: 196 VLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRN 255
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
+SW MIA A+HG G +AL LF+ M G+ D T + +L ACSH GL+++ E+F+
Sbjct: 256 SVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFH 315
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
SM DY + P HY +D +GRAGRL +A+ L+ +MPF P+ TW LL ACR++ +
Sbjct: 316 SMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQA 375
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
E A K AE++ ++ PE++ Y LL N+YAA+GR+GD +VR M DRG+KKV G S++EV
Sbjct: 376 ERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEV 435
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
+NKVH F GD HP +D I LE+L ++++ G+V +TK VLH V EEEKE ++ HS
Sbjct: 436 KNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHS 495
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EKLA+A+G+++ P G P+ ++KNLRVC DCH A K I+KI+ R I++RD +RFHHF G
Sbjct: 496 EKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQ 555
Query: 772 CSCGDYW 778
CSC DYW
Sbjct: 556 CSCKDYW 562
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 148/334 (44%), Gaps = 26/334 (7%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
R ++ N ++S Y + L AR +F + +R VVSW+ M+ YA +G A +F R
Sbjct: 17 HRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHR 76
Query: 180 M-----LEKNEISWNGLLAAY-----VQNGR-IEEACMLFESKANWEVVSWNSLMGGFVK 228
M +E N +++ G+ A ++ GR I M + + N+L+ +V+
Sbjct: 77 MRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVR 136
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTA 283
L +A+ +FD M D SW +MIT +N L EA LF E P V +
Sbjct: 137 CGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASV 196
Query: 284 M----VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+ SG ++ GK +R+ + ++ A++ Y + ++ + ++F AM +N
Sbjct: 197 LNACACSGALKVGKQIHSRLDASGF-HSSVLAQTALLDMYAKCGSLECSSKVFTAMETRN 255
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFI 395
SW MI AQ G+ A LF M D ++ ++ + +G ++SL F
Sbjct: 256 SVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFH 315
Query: 396 EM-KRYGERLNRSPFTSVLSTCANLASLELGKQL 428
M + Y + + L T L+ ++L
Sbjct: 316 SMVEDYAIAPTETHYCRALDTIGRAGRLQDAEEL 349
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 96/167 (57%), Gaps = 5/167 (2%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+E G+++H +L GF N L+ MY KCG ++EA F I+++ V+SW+ MI
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 482 YARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
YA HG G++AL+LF M+ G ++P+ +T G+ +AC +E+G E +++ G +
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGRE-IHALAMASGEL 119
Query: 541 PNSKHY--TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
+S ++++ R G L+EA+ + M PDA +W +++ AC
Sbjct: 120 KSSNAILENALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITAC 165
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 153/355 (43%), Gaps = 31/355 (8%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
R++++ N ++S Y G LD AR +F+ + +R +VSW+ MI Y + A LF M
Sbjct: 18 RATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRM 77
Query: 150 PKRDVVSWNTM-----------LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
V N M + Q A + N I N LL YV+
Sbjct: 78 RNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRC 137
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMI 254
G +EEA +F++ + + SW S++ + L +A +F RM + V+ +++
Sbjct: 138 GSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVL 197
Query: 255 TGYAQNNYLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
A + L + RL V TA++ Y + G ++ + +F AM +N+V
Sbjct: 198 NACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSV 257
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKN-VASWNTMIT---GYAQSGEITHARNLFDRM 366
SW AMIA Q + D A ELF+ M + VA T I + +G I + F M
Sbjct: 258 SWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSM 317
Query: 367 PQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+ I+ + + ++G +D+ L M + E L + ++L+ C
Sbjct: 318 VEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLT---WKTLLNAC 369
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 163/412 (39%), Gaps = 65/412 (15%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ + + GC D A +FN + R+ VS++AMI Y L+G+ A +F +M V
Sbjct: 24 NGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRV 83
Query: 125 SWNVMISGYVRN-----KSLSAARNLFEM------MPKRDVVSWNTMLSGYAQNGYADAA 173
N M V N + L R + + + + + N +L+ Y + G + A
Sbjct: 84 EPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEA 143
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE------------------------ 209
R++FD M + SW ++ A +N + EA LF
Sbjct: 144 RKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACS 203
Query: 210 ---------------SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
S + V++ +L+ + K L + +F M R+ VSW MI
Sbjct: 204 GALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMI 263
Query: 255 TGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
AQ+ EA LF+ E V D T+ ++ G + E+ F +M E +
Sbjct: 264 AALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAI 323
Query: 311 S-----WNAMIAGYVQTKRMDMARELFEAMTC-KNVASWNTMITG---YAQSGEITHARN 361
+ + + + R+ A EL +M +W T++ ++Q+ T
Sbjct: 324 APTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAE 383
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
L ++ D +++ + YA +G D +R+ M G L + P S +
Sbjct: 384 LLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRG--LKKVPGKSFI 433
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/760 (33%), Positives = 410/760 (53%), Gaps = 61/760 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG------------- 106
D+ N+ + +++ G AL++F+ MP R++VSY + GY
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQDPVGLYSRLHREGH 142
Query: 107 QLDPA-----RQVFDQMPQRDLVSW---NVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+L+P ++F + + ++ W ++ GY N + AA
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAA---------------- 186
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
+++ Y+ G D+AR +F+ +L K+ + W G+++ YV+NG E++ L S+ +
Sbjct: 187 -LINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLL-SRMGMDGFM 244
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT----------MITGYAQNNYLAEAQR 268
N+ + +G + F + V ++ ++ Y Q +++A +
Sbjct: 245 PNNYTFDTALKASIGLGAFHFAK-SVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKR 324
+F E P DV W+ M++ + QNG ++A IF M E N + ++++ G K
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKC 363
Query: 325 MDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ +L + K +V N +I YA+ ++ A LF + + +SW +I
Sbjct: 364 SGLGEQL-HGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIV 422
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
GY G +L +F E R + F+S L CA+LAS+ELG Q+HG +K
Sbjct: 423 GYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAK 482
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
V N+L+ MY KCG ++ A F E+ DV SWN +I+GY+ HG G+ AL +F+ MK
Sbjct: 483 RVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMK 542
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
KP+ +T +G+LS CS+ GL+++G + F SM D+G+ P +HYTCMV L GR+G+L
Sbjct: 543 GSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQL 602
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
D+A NL++ +P+EP W A+L A E A ++AE I ++ P++ YVLLSN+Y
Sbjct: 603 DKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMY 662
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A + +W +V+ +R M+++GVKK G SW+E Q VH FSVG + HP+ I LE L
Sbjct: 663 AGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLN 722
Query: 680 FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP-IRVMKNLRVC 738
K + G+V VL D+ +EEK+ L HSE+LA+AYG++ +P+ R I +MKNLR+C
Sbjct: 723 MKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRIC 782
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+A+K IS IV R +++RD NRFHHF G CSC D+W
Sbjct: 783 SDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 21/281 (7%)
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
++ + +C ++ + N ++ Y ++G A NLFD MP+ + +S+ + GYA +D
Sbjct: 74 DILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA----CQD 129
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+ L+ + R G LN FTS L +L E+ LH +VK+G+++ FVG AL+
Sbjct: 130 PVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALIN 189
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
Y CGSV+ A FE I+ KD++ W +++ Y +G +D+L L M G P++ T
Sbjct: 190 AYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYT 249
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY------TCMVDLLGRAGRLDEAQ 563
L A G F+ +G I + + ++ L + G + +A
Sbjct: 250 FDTALKA-------SIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAF 302
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ MP + D W ++ + + KA ++ M
Sbjct: 303 KVFNEMP-KNDVVPWSFMIAR---FCQNGFCNKAVDIFIRM 339
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 116/303 (38%), Gaps = 64/303 (21%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAG------------DWDIRQWNVAITTHMRNGCCDSALHV 83
P++ TL LN + K G D D+ N I + + D+A+ +
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKL 405
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------------------------- 118
F + ++ VS+N +I GY G+ A +F +
Sbjct: 406 FAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 119 ---------------PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
+R VS N +I Y + + A+ +F M DV SWN ++SG
Sbjct: 466 ELGVQVHGLAIKTNNAKRVAVS-NSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISG 524
Query: 164 YAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS- 218
Y+ +G A RIFD M + N +++ G+L+ G I++ FES +
Sbjct: 525 YSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEP 584
Query: 219 ----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLAEAQRLFEEA 273
+ ++ F + +L A + + +P V W M++ + N Y E R E
Sbjct: 585 CLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA-SMNQYNEEFARRSAEE 643
Query: 274 PVK 276
+K
Sbjct: 644 ILK 646
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 316/515 (61%), Gaps = 6/515 (1%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTK 323
RLF+ P D FT + ++ ++ V + I + N N ++ Y
Sbjct: 2 RLFDVLP--DTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCG 59
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
M A LFE M ++ +WN +I A+ G+I A F RMP + SW ++I+G+ Q
Sbjct: 60 EMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQ 119
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G +++ LF++++ R N SVL+ CA+L L+LG+ +H K GF+ V
Sbjct: 120 CGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHV 179
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
N L+ MY KCG +E A F E+ ++ V+SW+ MIAG A HG ++AL LF M +G+
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV 239
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
KP+ +T +G+L ACSH GL+++G +F SM DYGVIP +HY C+VDL RAG L+EA
Sbjct: 240 KPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAH 299
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ +MP +P+ WGALLG C+++ +LAE+A + + E++P N G YV++SN+YA +
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAE 359
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW D ++VR M+DRGVKK +G+S + V VH F GD HP+ + I ++L K+K
Sbjct: 360 RWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMK 419
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+ T +VL D+ E+EKE L HSEKLAV +G+++ P G PIR+MKNLRVCEDCH
Sbjct: 420 RRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHA 479
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A+K IS IV R II+RD NRFH F G CSC D+W
Sbjct: 480 ALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 164/357 (45%), Gaps = 23/357 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +++ Y L G++ A +F++MPQRD V+WN++I+ + + A F MP ++V
Sbjct: 49 NMILNLYGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVR 108
Query: 156 SWNTMLSGYAQNGYADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-- 209
SW +M+SG+ Q G + A +F D + NE++ +LAA G ++ ++ E
Sbjct: 109 SWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYS 168
Query: 210 SKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+K+ ++ V N+L+ +VK L +A+ +F M R VSW+ MI G A + EA
Sbjct: 169 TKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEAL 228
Query: 268 RLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAG 318
LF E V T+ ++ G +DE R F +M V + ++
Sbjct: 229 CLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDL 288
Query: 319 YVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS---W 374
+ + ++ A E +M K N W ++ G I A + + D ++ +
Sbjct: 289 FSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYY 348
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
I YA++ ED+ R+ MK G + ++ S ++ + G Q H Q
Sbjct: 349 VVISNIYAEAERWEDAARVRKLMKDRG--VKKTSGWSSITVNGVVHEFVAGDQTHPQ 403
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 18/275 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A+ +F MP+R +V++N +I+ G +D A F +MP +++ SW MISG+V+
Sbjct: 64 AMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKP 123
Query: 140 SAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFD----RMLEKNEISWNGL 191
+ A +LF + V V+ ++L+ A G D R + + ++N N L
Sbjct: 124 NEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTL 183
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDE 247
+ YV+ G +E A +F VVSW++++ G + +A +F M +
Sbjct: 184 IDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
Query: 248 VSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
V++ ++ + + E +R F + + + + +V + + G ++EA
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFIL 303
Query: 303 AMPEK-NTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+MP K N V W A++ G K +D+A E + ++
Sbjct: 304 SMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLS 338
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 161/369 (43%), Gaps = 38/369 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF---- 115
D WN+ I + G D A F MP ++ S+ +MISG++ G+ + A +F
Sbjct: 75 DAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLE 134
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYAD 171
D+ + + V+ +++ L R + E KR+V NT++ Y + G +
Sbjct: 135 DEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLE 194
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMG--- 224
ARR+F M E+ +SW+ ++A +G+ EEA LF V V++ L+
Sbjct: 195 NARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACS 254
Query: 225 --GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTW 281
G + + R A D + + ++ +++ L EA P+K + W
Sbjct: 255 HMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVW 314
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVS--WNAMIAG-YVQTKRMDMA---RELFEAM 335
A++ G + +D A + E + ++ + +I+ Y + +R + A R+L +
Sbjct: 315 GALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKDR 374
Query: 336 TCKNVASWNTM-ITGYAQ---SGEITHARNLFDRMPQHD--CISWAAIIAGYAQSGYSED 389
K + W+++ + G +G+ TH PQ + C W ++ + GY+
Sbjct: 375 GVKKTSGWSSITVNGVVHEFVAGDQTH--------PQAEDICKIWDKLLVKMKRRGYAPK 426
Query: 390 SLRLFIEMK 398
+ + ++M+
Sbjct: 427 TSVVLLDME 435
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/635 (36%), Positives = 369/635 (58%), Gaps = 17/635 (2%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWE 215
+++G + G AR++FD + WN ++ +Y +N + ++ + + +
Sbjct: 94 LVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPD 153
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFE 271
++ ++ + G + I ++ D N ++ YA+ ++ A+ +F+
Sbjct: 154 GFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFD 213
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIA---GYVQTKRMDM 327
+ + +WT+++SGY QNGK EA +F M W A+++ Y ++
Sbjct: 214 GLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQ 273
Query: 328 ARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
R + + + A ++ YA+ G +T A++ FD+M + I W A+I+GYA+
Sbjct: 274 GRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAK 333
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G++E+++ LF M + + S + A + SLEL + + + K + + FV
Sbjct: 334 NGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFV 393
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
+L+ MY KCGSVE A F+ DKDV+ W+ MI GY HG G +A+ L+ MK G+
Sbjct: 394 NTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGV 453
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
P+D+T +G+L+AC+H+GLV++G E F+ M +D+ ++P ++HY+C+VDLLGRAG L EA
Sbjct: 454 FPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEAC 512
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ +P EP + WGALL AC++Y L E AA +F ++P N G YV LSNLYA+S
Sbjct: 513 AFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSC 572
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
W V+ VR+ MR++G+ K GYS +E+ K+ F VGD HP I+ L+ LE +LK
Sbjct: 573 LWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLK 632
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ GFV T+ VLHD+ EEKE L +HSE++AVAYG++S G +R+ KNLR C +CH+
Sbjct: 633 EVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHS 692
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK ISK+V R II+RD NRFHHF G CSCGDYW
Sbjct: 693 AIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 125/555 (22%), Positives = 228/555 (41%), Gaps = 115/555 (20%)
Query: 91 SSVSYNAMISGYLLNG-----QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNL 145
S + +N + L+NG Q+ AR++FD+ D+ WN +I Y RN +
Sbjct: 82 SGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEM 141
Query: 146 FEMM------PK---------------------------------RDVVSWNTMLSGYAQ 166
+ M P DV N +++ YA+
Sbjct: 142 YRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAK 201
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES------KANWEVVSWN 220
G+ A+ +FD + + +SW +++ Y QNG+ EA +F K +W ++
Sbjct: 202 CGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDW--IALV 259
Query: 221 SLMGGFVKQKRLGDAKWIFD---RMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVK 276
S++ + L + I +M + DE + +T YA+ + A+ F++
Sbjct: 260 SILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTT 319
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMARELF 332
+V W AM+SGY +NG +EA +F M +N +V+ + + Q +++A+ +
Sbjct: 320 NVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMD 379
Query: 333 EAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+ ++ N S ++I YA+ G + AR +FDR D + W+A+I GY G
Sbjct: 380 DYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGW 439
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+++ L+ MK+ G N F +L+ C H LVK G+
Sbjct: 440 EAINLYHVMKQAGVFPNDVTFIGLLTACN-----------HSGLVKEGW----------- 477
Query: 449 VMYCKCGSVEEAYHAFE--EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
E +H + EIV ++ ++ ++ R G+ +A + + I+P
Sbjct: 478 ----------ELFHCMKDFEIVPRNE-HYSCVVDLLGRAGYLGEACAF---IMKIPIEPG 523
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHY---------TCMVDLLGRA 556
+LSAC V G Y+ N+ + + P N+ HY +C+ D +
Sbjct: 524 VSVWGALLSACKIYRCVTLGE---YAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHV 580
Query: 557 GRLDEAQNLMKNMPF 571
L + L K++ +
Sbjct: 581 RVLMREKGLNKDLGY 595
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG---QLDPAR---- 112
D+ WN I ++ RN + ++ M R + V + Y+L LD
Sbjct: 118 DVFMWNAIIRSYSRNNMYRDTVEMYRWM-RWTGVHPDGFTFPYVLKACTELLDFGLSCII 176
Query: 113 --QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
Q+ D+ N +++ Y + + A+ +F+ + R +VSW +++SGYAQNG A
Sbjct: 177 HGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKA 236
Query: 171 DAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSL 222
A R+F +M ++ + I+ +L AY +E+ + + E SL
Sbjct: 237 VEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISL 296
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DV 278
+ K + AK FD+M + + WN MI+GYA+N + EA LF + D
Sbjct: 297 TAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDS 356
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGYVQTKRMDMARELFEA 334
T + V Q G ++ A+ + D + + N S ++I Y + ++ AR +F+
Sbjct: 357 VTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDR 416
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDS 390
+ K+V W+ MI GY G+ A NL+ M Q +++ ++ SG ++
Sbjct: 417 NSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEG 476
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
LF MK + E + R+ S + A LG+ ++K+ E G V ALL
Sbjct: 477 WELFHCMKDF-EIVPRNEHYSCVVDLLGRAGY-LGEAC-AFIMKIPIEPGVSVWGALL 531
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H +LV G + F+ L+ G + A F+E DV WN +I Y+R+
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACS 518
+D + ++ M+ G+ PD T +L AC+
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACT 165
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/512 (42%), Positives = 323/512 (63%), Gaps = 12/512 (2%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAR-EL 331
+VFTW ++ GY ++ A + + M E +T ++ ++ +K +++ E
Sbjct: 82 NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAI--SKSLNVREGEA 139
Query: 332 FEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
++T +N V N+++ YA G+ A +F+ M + D ++W ++I G+A +G
Sbjct: 140 IHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGR 199
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
++L LF EM G + S+LS A L +LELG+++H L+KVG V N+
Sbjct: 200 PNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNS 259
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
LL +Y KCG++ EA F E+ +++ +SW ++I G A +GFG++AL LF+ M+ G+ P
Sbjct: 260 LLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPS 319
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+IT VG+L ACSH G++++G EYF M + G+IP +HY CMVDLL RAG + +A +
Sbjct: 320 EITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYI 379
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+NMP +P+A W LLGAC ++G L E A + +EP+++G YVLLSNLYA+ RW
Sbjct: 380 QNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWS 439
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DV +R M GVKK GYS +E+ N+V+ F++GD HP+ +YA LE++ LK +G
Sbjct: 440 DVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEG 499
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T VL D+ EEEKE L YHSEK+A+A+ +L+ P G PIRVMKNLRVC DCH AIK
Sbjct: 500 YVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIK 559
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I+KI R I++RD +RFHHF GGSCSC DYW
Sbjct: 560 LIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 134/260 (51%), Gaps = 5/260 (1%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+ T + S +++A N+F + + +W II GYA+S + + +M +
Sbjct: 58 IFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPD 117
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+ +L + ++ G+ +H ++ GFE+ FV N+LL +Y CG E AY FE
Sbjct: 118 THTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFE 177
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ ++D+++WN+MI G+A +G +AL LF M G++PD T+V +LSA + G +E
Sbjct: 178 LMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALEL 237
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G + + G+ NS ++DL + G + EAQ + M E +A +W +L+
Sbjct: 238 GRRVHVYLLK-VGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMS-ERNAVSWTSLIVGL 295
Query: 586 RLYGKTELAEKAAEVIFEME 605
+ G E+A E+ EME
Sbjct: 296 AVNG---FGEEALELFKEME 312
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 47/362 (12%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGYVR 135
A +VF + + ++N +I GY + PA + QM + D ++ ++
Sbjct: 71 AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAI-- 128
Query: 136 NKSLSA----------ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
+KSL+ RN FE + V N++L YA G ++A ++F+ M E++
Sbjct: 129 SKSLNVREGEAIHSVTIRNGFESL----VFVQNSLLHIYAACGDTESAYKVFELMKERDL 184
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKA-------NWEVVSWNSL---MGGFVKQKRLGDA 235
++WN ++ + NGR EA LF + + VVS S +G +R+
Sbjct: 185 VAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRV--H 242
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
++ ++ N+++ YA+ + EAQR+F E ++ +WT+++ G NG +
Sbjct: 243 VYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGE 302
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAM-----TCKNVASWNTM 346
EA +F M + V G + +D E F M + + M
Sbjct: 303 EALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCM 362
Query: 347 ITGYAQSGEITHARNLFDRMP-QHDCISW-----AAIIAGYAQSGYSEDSLRLFIEMKRY 400
+ +++G + A MP Q + + W A I G+ G S L +E K
Sbjct: 363 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHS 422
Query: 401 GE 402
G+
Sbjct: 423 GD 424
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 20/285 (7%)
Query: 104 LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNT 159
L+ + A VF + ++ +WN +I GY + + S A + M + D ++
Sbjct: 64 LSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPF 123
Query: 160 MLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
+L +++ I + E N LL Y G E A +FE +
Sbjct: 124 LLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERD 183
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQR--- 268
+V+WNS++ GF R +A +F M V D + ++++ A+ L +R
Sbjct: 184 LVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHV 243
Query: 269 -LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
L + K+ +++ Y + G + EA+ +F M E+N VSW ++I G +
Sbjct: 244 YLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEE 303
Query: 328 ARELFEAMTCKNVASWNTMITG--YAQS--GEITHARNLFDRMPQ 368
A ELF+ M + + G YA S G + F RM +
Sbjct: 304 ALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKE 348
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLV 124
H+ C D SA VF M R V++N+MI+G+ LNG+ + A +F +M + D
Sbjct: 161 HIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGF 220
Query: 125 SWNVMISGYVRNKSLSAARN----LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ ++S +L R L ++ ++ N++L YA+ G A+R+F M
Sbjct: 221 TVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEM 280
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
E+N +SW L+ NG EEA LF+
Sbjct: 281 SERNAVSWTSLIVGLAVNGFGEEALELFK 309
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 264/720 (36%), Positives = 409/720 (56%), Gaps = 51/720 (7%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
AL+V S+ S+ N ++ Y G L AR FD + ++ S+NV++ Y ++ +
Sbjct: 32 ALYV-KSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKI 90
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY 195
AR LF+ P+ D VS+NT++SGYA AA +F RM E + + +GL+AA
Sbjct: 91 HIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAAC 150
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMP-VRDEVSW 250
+ + F ++ S++S+ FV K L +A +F M +RDEVSW
Sbjct: 151 CDRVDLIKQLHCFAVSGGFD--SYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSW 208
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
N+MI Y Q+ A+A L++E K D+FT ++++
Sbjct: 209 NSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA------------------- 249
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE---ITHARNLF 363
S + +I G +L +A +N + +I Y++ G ++ + +F
Sbjct: 250 --LTSLDHLIGG------RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVF 301
Query: 364 DRMPQHDCISWAAIIAGYAQSG-YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
+ D + W +I+GY+ + +SE++++ F +M+R G R + F V S C+NL+S
Sbjct: 302 QEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 423 ELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
GKQ+HG +K + V NAL+ +Y K G++ +A F+ + + + +S+N MI G
Sbjct: 362 SQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKG 421
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA+HG G +AL L++ M GI P++IT V ILSAC+H G V++G +YF +M + + P
Sbjct: 422 YAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEP 481
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
++HY+CM+DLLGRAG+L+EA+ + MP++P + W ALLGACR + LAE+AA+ +
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKEL 541
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
M+P A YV+L+N+YA +G+W +++ VR MR + ++K G SW+EV+ K H F
Sbjct: 542 MVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAE 601
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTK--LVLHDVGEEEKEHM-LRYHSEKLAVAY 718
D HP + YLEE+ K+K+ G+V K +V D E +E M L +HSEKLAVA+
Sbjct: 602 DWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAF 661
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G++S G I V+KNLR+C DCHNAIK +S + GR II+RDN RFH F G CSCGDYW
Sbjct: 662 GLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/513 (24%), Positives = 219/513 (42%), Gaps = 123/513 (23%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N + + + GC A F+S + SYN ++ Y + ++ ARQ+FD+ PQ D V
Sbjct: 47 NHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTV 106
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
S+N +ISGY + AA LF+ M R++ G+ +G+
Sbjct: 107 SYNTLISGYADARETVAAMVLFKRM--REL--------GFEVDGF--------------- 141
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV----KQKRLGDAKWIFD 240
+ +GL+AA + + F ++ S++S+ FV K L +A +F
Sbjct: 142 --TLSGLIAACCDRVDLIKQLHCFAVSGGFD--SYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 241 RMP-VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMV---------- 285
M +RDEVSWN+MI Y Q+ A+A L++E K D+FT +++
Sbjct: 198 GMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 286 -----------SGYVQNGKV-----------------DEARMIFDAMPEKNTVSWNAMIA 317
+G+ QN V ++ +F + + V WN MI+
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMIS 317
Query: 318 GY-VQTKRMDMARELFEAM-----------------TCKNVASW---------------- 343
GY + + + A + F M C N++S
Sbjct: 318 GYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIP 377
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
N +I+ Y +SG + AR +FDRMP+ + +S+ +I GYAQ G+ ++LRL+
Sbjct: 378 SNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQR 437
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL---VKVGFEAGCFVGNALLVMYCK 453
M G N F ++LS CA+ ++ G++ + K+ EA + + ++ + +
Sbjct: 438 MLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY--SCMIDLLGR 495
Query: 454 CGSVEEAYHAFEEIVDK-DVISWNTMIAGYARH 485
G +EEA + + K ++W ++ +H
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 187/476 (39%), Gaps = 108/476 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ +NV + + ++ A +F+ P+ +VSYN +ISGY + A +F +M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMR 132
Query: 120 QR--------------------DLVSW-----------------NVMISGYVRNKSLSAA 142
+ DL+ N ++ Y + L A
Sbjct: 133 ELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 143 RNLFEMMPK-RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN--------------EIS 187
++F M RD VSWN+M+ Y Q+ A ++ M+ K S
Sbjct: 193 VSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+ L+ +G++ +A S ++ + S GG + + D++ +F + D
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG---RDGMSDSEKVFQEILSPDL 309
Query: 248 VSWNTMITGYAQN-NYLAEAQRLFEE---------------------------------- 272
V WNTMI+GY+ N + EA + F +
Sbjct: 310 VLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHG 369
Query: 273 ------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
P + A++S Y ++G + +AR +FD MPE N VS+N MI GY Q
Sbjct: 370 LAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 327 MARELFEAMTCKNVASWN----TMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAI 377
A L++ M +A N +++ A G++ + F+ M + I ++ +
Sbjct: 430 EALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCM 489
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
I ++G E++ R FI+ Y + + ++L C ++ L ++ +L+
Sbjct: 490 IDLLGRAGKLEEAER-FIDAMPY--KPGSVAWAALLGACRKHKNMALAERAAKELM 542
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 55/223 (24%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG----------SVEE------------ 459
L GK LH VK + ++ N + +Y KCG S EE
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKA 83
Query: 460 ---------AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
A F+E D +S+NT+I+GYA A++LF+ M+ +G + D T+
Sbjct: 84 YAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTL 143
Query: 511 VGILSACS---------HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G+++AC H V G + + S+N + V + G L E
Sbjct: 144 SGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAF------------VTYYSKGGLLRE 191
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
A ++ M D +W +++ A YG+ + KA + EM
Sbjct: 192 AVSVFYGMDGLRDEVSWNSMIVA---YGQHKEGAKALALYKEM 231
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/531 (41%), Positives = 335/531 (63%), Gaps = 19/531 (3%)
Query: 263 LAEAQRLFE--EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVSWN 313
++ A ++F E P+ +VF W ++ GY + G A ++ M P+ +T +
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFL 127
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQ 368
G + R+ E ++ ++ + N+++ YA G++ A +FD+MP+
Sbjct: 128 LKAVGKMADVRLG---ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE 184
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D ++W ++I G+A++G E++L L+ EM G + + S+LS CA + +L LGK+
Sbjct: 185 KDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRF 244
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H ++KVG N LL +Y +CG VEEA F+E+VDK+ +SW ++I G A +G G
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLG 304
Query: 489 KDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
K+A+ LF++M++ G+ P +IT VGIL ACSH G+V++G EYF M+ +Y + P +H+
Sbjct: 305 KEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFG 364
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
CMVDLL RAG++ +A + MP +P+ W LLGAC ++G ++LAE A I ++EP
Sbjct: 365 CMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPN 424
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
++G YVLLSN+YA+ RW DV K+R +M GV+KV G+S +EV N+VH F +GD HP+
Sbjct: 425 HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQ 484
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
D IYA L+E+ +L+ +G+V V DV EEEKE+ L YHSEK+A+A+ ++S P
Sbjct: 485 NDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERW 544
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PIRV+KNL+VC DCH AIK +SK+ R I++RD +RFHHF GSCSC DYW
Sbjct: 545 PIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 168/392 (42%), Gaps = 60/392 (15%)
Query: 139 LSAARNLFEMMPKR-DVVSWNTMLSGYAQNGYADAARRIFDRM-----LEKNEISWNGLL 192
+S A +F + K +V WNT++ GYA+ G + +A ++ M +E + ++ LL
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128
Query: 193 AAY--VQNGRIEEAC--MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
A + + R+ E ++ S + NSL+ + + A +FD+MP +D V
Sbjct: 129 KAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+WN++I G+A+N EA L+ E +K D FT +++S + G + + M
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYM 248
Query: 305 PE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
+ +N S N ++ Y + R++ A+ LF+ M KN SW ++I G A +G A
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAI 308
Query: 361 NLFDRMPQHD----C-ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
LF M + C I++ I+ + G ++ F +R E P
Sbjct: 309 ELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYF---RRMSEEYKIEPRIE---- 361
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY-HAFEEIVDKDVIS 474
GC V + + G V++AY + + + +V+
Sbjct: 362 ----------------------HFGCMVD-----LLARAGQVKKAYEYILKMPMQPNVVI 394
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
W T++ H G L MK + ++P+
Sbjct: 395 WRTLLGACTVH--GDSDLAELARMKILQLEPN 424
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
N+++ Y G + A +VFD+MP++DLV+WN +I+G+ N A L+ M K
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIK 219
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
D + ++LS A+ G +R M L +N S N LL Y + GR+EEA L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-----EVSWNTMITGYAQNNY 262
F+ + VSW SL+ G +A +F M ++ E+++ ++ +
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGM 339
Query: 263 LAEA----QRLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMI 316
+ E +R+ EE ++ + + MV + G+V +A MP + N V W ++
Sbjct: 340 VKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLL 399
Query: 317 AGYVQTKRMDMA 328
D+A
Sbjct: 400 GACTVHGDSDLA 411
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 140/328 (42%), Gaps = 26/328 (7%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LE 182
N ++ Y +++A +F+ MP++D+V+WN++++G+A+NG + A ++ M ++
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIK 219
Query: 183 KNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ + LL+A + G + + + + S N L+ + + R+ +AK +
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD-----VFTWTAMVSGYVQNGK 293
FD M ++ VSW ++I G A N EA LF+ K+ T+ ++ G
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGM 339
Query: 294 VDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
V E F M E+ + + M+ + ++ A E M + NV W T++
Sbjct: 340 VKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLL 399
Query: 348 TGYAQSGEITHAR----NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
G+ A + P H + + YA D ++ +M R G R
Sbjct: 400 GACTVHGDSDLAELARMKILQLEPNHSG-DYVLLSNMYASEQRWSDVQKIRKQMLRDGVR 458
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ P S++ + +G + H Q
Sbjct: 459 --KVPGHSLVEVGNRVHEFLMGDKSHPQ 484
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLV 124
H+ C D SA VF+ MP + V++N++I+G+ NG+ + A ++ +M + D
Sbjct: 164 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGF 223
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ ++S + +L+ + M K R++ S N +L YA+ G + A+ +FD M
Sbjct: 224 TIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
++KN +SW L+ NG +EA LF++ + E
Sbjct: 284 VDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKE 318
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN I NG + AL ++ M + + +++S G L ++
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFH 245
Query: 116 DQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
M + R+L S NV++ Y R + A+ LF+ M ++ VSW +++ G A NG
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGK 305
Query: 172 AARRIFDRMLEKN-----EISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNS 221
A +F M K EI++ G+L A G ++E F E K + +
Sbjct: 306 EAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGC 365
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMI 254
++ + ++ A +MP++ V W T++
Sbjct: 366 MVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLL 399
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/557 (39%), Positives = 334/557 (59%), Gaps = 31/557 (5%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA--------- 303
+I Y + + L +A +F+E P ++V +WTAM+S Y Q G +A +F A
Sbjct: 284 LIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGV 343
Query: 304 ----------------MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----VASW 343
E N ++ ++ + + R++ + N V
Sbjct: 344 YAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVG 403
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
++++ YA+ G+I AR +F+ +P+ D +S AII+GYAQ G E++L LF ++ G +
Sbjct: 404 SSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMK 463
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N +T VL+ + LA+L+LGKQ+H +++ + + N+L+ MY KCG++ +
Sbjct: 464 SNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRI 523
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F+ + ++ VISWN M+ GY++HG G++ L LF M+ +KPD +T++ +LS CSH GL
Sbjct: 524 FDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGL 583
Query: 523 VEKGTEYFYSMNR-DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+KG F M+ V P +HY C+VDLLGR+GR++EA +K MPFEP AA WG+L
Sbjct: 584 EDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSL 643
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++ ++ E A + + E+EP NAG YV+LSNLYA++GRW DVS +R M + V
Sbjct: 644 LGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVT 703
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G S +E+ +HTF D HP ++ I ++EL K+ G+V VLHDV EE
Sbjct: 704 KEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEE 763
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
+KE +L HSEKLA+++G+++ PA PIRV+KNLR+C DCHN K+ISK+ GR + LRD
Sbjct: 764 QKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDK 823
Query: 762 NRFHHFSGGSCSCGDYW 778
NRFH GG CSC DYW
Sbjct: 824 NRFHRIVGGKCSCEDYW 840
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 172/376 (45%), Gaps = 56/376 (14%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ-RDLVSWNV- 128
H++ ALH FN +YNA+++ + ++V M + R L S +
Sbjct: 226 HLQQPLLQMALHGFNMKFE----NYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLR 281
Query: 129 --MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF--------- 177
+I Y + SL A N+F+ MP+R+VVSW M+S Y+Q GYA A +F
Sbjct: 282 TRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLT 341
Query: 178 -----DRM-----------LEKNEISWNGLLAAYVQN-----GRIEEACMLFESKANWE- 215
D++ E NE ++ +L + + GR + ++ K N+E
Sbjct: 342 GVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLII---KLNYED 398
Query: 216 -VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE--- 271
V +SL+ + K ++ +A+ +F+ +P RD VS +I+GYAQ EA LF
Sbjct: 399 HVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQ 458
Query: 272 -EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW----NAMIAGYVQTKRMD 326
E + T+T +++ +D + + + + S+ N++I Y + +
Sbjct: 459 GEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLT 518
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH-----DCISWAAIIAGY 381
+R +F+ M + V SWN M+ GY++ GE LF M + D ++ A+++G
Sbjct: 519 YSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGC 578
Query: 382 AQSGYSEDSLRLFIEM 397
+ G + L +F +M
Sbjct: 579 SHGGLEDKGLNIFNDM 594
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 116/238 (48%), Gaps = 32/238 (13%)
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
++M +G + + ++L+ C N + G+++H ++K + F+ L+V+Y K
Sbjct: 231 LLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 290
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF--------------ESMK 499
C S+ +A++ F+E+ +++V+SW MI+ Y++ G+ AL LF + +K
Sbjct: 291 CDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLK 350
Query: 500 T-------VGIKPDDITMVGILSAC-SHTGLV--EKGTEYFYSMNRDYGVIPNSKHYTCM 549
V +P++ T +L++C S G + + +N + V S +
Sbjct: 351 LSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSS----L 406
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+D+ + G++ EA+ + + +P E D + A++ Y + L E+A E+ ++ E
Sbjct: 407 LDMYAKDGKIHEARTVFECLP-ERDVVSCTAIISG---YAQLGLDEEALELFRRLQGE 460
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/548 (40%), Positives = 331/548 (60%), Gaps = 9/548 (1%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
+F + RD + ++T Y + Y +A +LF++ P KD+ +W +++SG+ + +
Sbjct: 65 VFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSLT 124
Query: 298 ---RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGY 350
M F+ + N V+ +MI+ + +D + + + V N++I Y
Sbjct: 125 AFYTMKFEMSVKPNEVTILSMISAC--SGALDAGKYIHGFGIKVGGTLEVKVANSLINMY 182
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+SG++T A LF+ +P + +SW +IIA +G + + + F +M+R G +
Sbjct: 183 GKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTIL 242
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
++L C +L +L + +HG + GF A + ALL Y K G + +Y F E+
Sbjct: 243 ALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFA 302
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D ++W M+AGYA HG G++A+ LFESM G++PD +T +LSACSH+GLV +G YF
Sbjct: 303 DRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYF 362
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
M+ YG+ P HY+CMVDLLGR G L++A +++NMP EP+A WGALLGACR++G
Sbjct: 363 NVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGN 422
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
EL ++ AE + MEP + Y++LSN+Y+AS W D +KVR +++RG+K+ GYS +E
Sbjct: 423 IELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIE 482
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
NK H F VGD HPE ++IY+ LEEL K+++ G+ T+ VL DV EE KE M+ H
Sbjct: 483 YGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKH 542
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SEKLA+A+G+L G + + KNLR+C DCH+ K IS I R II+RD RFHHFS G
Sbjct: 543 SEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDG 602
Query: 771 SCSCGDYW 778
CSC DYW
Sbjct: 603 FCSCADYW 610
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 170/414 (41%), Gaps = 90/414 (21%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR--NKSLS 140
VF S+ R + +++ Y G + A ++FD MP +DLVSWN +ISG+ R + SL+
Sbjct: 65 VFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSLT 124
Query: 141 AARNL-FEMMPKRDVVSWNTMLSG---------------------------------YAQ 166
A + FEM K + V+ +M+S Y +
Sbjct: 125 AFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGFGIKVGGTLEVKVANSLINMYGK 184
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE----------------------- 203
+G +A R+F+ + + N +SWN ++AA V NG E
Sbjct: 185 SGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILAL 244
Query: 204 --AC--------------MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
AC ++F + ++ +L+ + K RL + +F + D
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADR 304
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDA 303
V+W M+ GYA + EA +LFE K D T+T ++S +G V+E + F+
Sbjct: 305 VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNV 364
Query: 304 MPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEIT 357
M E + ++ M+ + ++ A E+ + M + N W ++ G I
Sbjct: 365 MSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIE 424
Query: 358 HARNLFDR---MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ + + M D ++ + Y+ S +D+ ++ +K G L R+P
Sbjct: 425 LGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERG--LKRTP 476
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYL---AEAQRLFEEAPVKDVFTWTAMVSG--- 287
DA +FD MP +D VSWN++I+G+++ ++ A FE + + T +M+S
Sbjct: 92 DALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSG 151
Query: 288 ------------------------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
Y ++G + A +F+A+P+ NTVSWN++IA
Sbjct: 152 ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211
Query: 318 GYV-------------QTKRM----------------------DMARELFEAMTCKNVAS 342
V + +R+ +A + M C +
Sbjct: 212 AQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGA 271
Query: 343 WNTMITG----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
T+ T YA+ G ++ + +F + D ++W A++AGYA G ++++LF M
Sbjct: 272 KITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMA 331
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSV 457
G + FT +LS C++ + GK + +V G E + ++ + +CG +
Sbjct: 332 NKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLL 391
Query: 458 EEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+AY + + ++ + W ++ HG
Sbjct: 392 NDAYEVIQNMPMEPNAGVWGALLGACRVHG 421
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 99/176 (56%), Gaps = 7/176 (3%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+++L + S+ +++H ++ K F+G+ L+ Y K G E+A F+++
Sbjct: 43 SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH 102
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMK-TVGIKPDDITMVGILSACSHTGLVEKGTE 528
KD++SWN++I+G++R +L F +MK + +KP+++T++ ++SACS G ++ G +
Sbjct: 103 KDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAG-K 157
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
Y + G K ++++ G++G L A L + +P +P+ +W +++ A
Sbjct: 158 YIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/754 (33%), Positives = 400/754 (53%), Gaps = 71/754 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N +++ Y G +VFD++ +R+ VSWN +IS + A F M DV
Sbjct: 133 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVE 192
Query: 155 ------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS---WNGLLAAYVQNGRIEEAC 205
VS S + +++ L K E++ N L+A Y + G++ +
Sbjct: 193 PSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSK 252
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNN 261
+L S ++V+WN+++ + ++ +A M + D + ++++ +
Sbjct: 253 VLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLE 312
Query: 262 YLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
L + L A ++ F +A+V Y +V +FD M ++ WNAMI
Sbjct: 313 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMI 372
Query: 317 AGYVQTKRMDMARELFEAM------------------TCKNVASW--------------- 343
GY Q + + A LF M C ++
Sbjct: 373 TGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGL 432
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
N ++ Y++ G+I A+ +F +M D ++W II GY S ED+L + +
Sbjct: 433 DRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHK 492
Query: 397 MK-----------RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
M+ R + N ++L +CA L++L GK++H +K VG+
Sbjct: 493 MQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 552
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG ++ + F++I ++VI+WN ++ Y HG +DA+ + M G+KP
Sbjct: 553 ALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKP 612
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+++T + + +ACSH+G+V +G + FY+M +DYGV P+S HY C+VDLLGRAGR+ EA L
Sbjct: 613 NEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQL 672
Query: 566 MKNMPFEPD-AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
+ +P D A W +LLGACR++ E+ E AA+ + ++EP A YVLL+N+Y+++G
Sbjct: 673 INLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 732
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W ++VR M+ +GV+K G SW+E ++VH F GD+ HP+ +++ YLE L ++++
Sbjct: 733 WYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRK 792
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G++ T VLH+V E+EKE +L HSEKLA+A+GIL+ G IRV KNLRVC DCH A
Sbjct: 793 EGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 852
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISK+V R IILRD RFHHF G+CSCGDYW
Sbjct: 853 TKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 165/374 (44%), Gaps = 48/374 (12%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE- 333
V V +V+ Y + G +FD + E+N VSWN++I+ ++ +MA E F
Sbjct: 126 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 185
Query: 334 ----------------AMTCKNVAS------------------------WNTMITGYAQS 353
A+ C N NT++ Y +
Sbjct: 186 MLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVAMYGKM 245
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ ++ L D ++W +++ Q+ ++L EM G + +SVL
Sbjct: 246 GKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVL 305
Query: 414 STCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C++L L GK+LH +K G + FVG+AL+ MYC C V F+ + D+ +
Sbjct: 306 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKI 365
Query: 473 ISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
WN MI GYA++ + ++AL+LF M ++ G+ + TM G++ AC +G K E +
Sbjct: 366 GLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK-KEAIH 424
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
G+ + ++D+ R G++D A+ + M + D TW ++ Y +
Sbjct: 425 GFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKME-DRDLVTWNTIITG---YVFS 480
Query: 592 ELAEKAAEVIFEME 605
E E A ++ +M+
Sbjct: 481 ERHEDALLMLHKMQ 494
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 189/447 (42%), Gaps = 71/447 (15%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS-LSAARNLFEMM 149
+S N +++ Y G+L ++ + RDLV+WN ++S +N+ L A L EM+
Sbjct: 231 NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMV 290
Query: 150 ------------------PKRDVVSWNTMLSGYA-QNGYAD------------------- 171
+++ L YA +NG D
Sbjct: 291 LEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 350
Query: 172 -AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFVK- 228
+ R+FD M ++ WN ++ Y QN EEA +LF E + + +++ ++ M G V
Sbjct: 351 LSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPA 410
Query: 229 -------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
K+ ++ R RD N ++ Y++ + A+R+F + +D+ TW
Sbjct: 411 CVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTW 470
Query: 282 TAMVSGYVQNGKVDEARMIFDAMP---------------EKNTVSWNAMIAGYVQTKRMD 326
+++GYV + + ++A ++ M + N+++ ++ +
Sbjct: 471 NTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALA 530
Query: 327 MARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
+E+ A KN VA + ++ YA+ G + +R +FD++P + I+W I+ Y
Sbjct: 531 KGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAY 589
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAG 440
G S+D++ + M G + N F SV + C++ + G ++ + K G E
Sbjct: 590 GMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPS 649
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEI 467
++ + + G V+EAY I
Sbjct: 650 SDHYACVVDLLGRAGRVKEAYQLINLI 676
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 165/367 (44%), Gaps = 25/367 (6%)
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM- 335
W ++ V++ + EA + + M + + ++ A++ + MD+ +++ +
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 336 ----TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
+V NT++ Y + G+ +FDR+ + + +SW ++I+ E +L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 392 RLFIEMKRYGERLNRSPFT--SVLSTCANLA---SLELGKQLHGQLVKVGFEAGCFVGNA 446
F M E + S FT SV C+N L +GKQ+H ++ G E F+ N
Sbjct: 181 EAFRCM--LDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINT 237
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY K G + + +D+++WNT+++ ++ +AL M G++PD
Sbjct: 238 LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPD 297
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
T+ +L ACSH ++ G E ++ + NS + +VD+ ++ +
Sbjct: 298 GFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVF 357
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY---VLLSNLYAASG 623
M F+ W A++ Y + E E+A + EME E+AG+ ++ + A
Sbjct: 358 DGM-FDRKIGLWNAMITG---YAQNEYDEEALLLFIEME-ESAGLLANSTTMAGVVPACV 412
Query: 624 RWGDVSK 630
R G SK
Sbjct: 413 RSGAFSK 419
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 167/383 (43%), Gaps = 48/383 (12%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-DLVSWNVMISGYV--- 134
S VF+ M R +NAMI+GY N + A +F +M + L++ + ++G V
Sbjct: 352 SGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPAC 411
Query: 135 -RNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
R+ + S + + KR D N ++ Y++ G D A+RIF +M +++ ++WN
Sbjct: 412 VRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWN 471
Query: 190 GLLAAYVQNGRIEEACM------LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
++ YV + R E+A + + E KA+ E S SL + I
Sbjct: 472 TIITGYVFSERHEDALLMLHKMQILERKAS-ERASRVSLKPNSITLMT------ILPSCA 524
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
++ I YA N LA DV +A+V Y + G + +R +FD
Sbjct: 525 ALSALAKGKEIHAYAIKNNLA-----------TDVAVGSALVDMYAKCGCLQMSRKVFDQ 573
Query: 304 MPEKNTVSWNAMIAGY----VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+P +N ++WN ++ Y +DM R + N ++ ++ + SG +
Sbjct: 574 IPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEG 633
Query: 360 RNLFDRM-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
+F M P D +A ++ ++G +++ +L + R ++ ++S+
Sbjct: 634 LKIFYNMKKDYGVEPSSD--HYACVVDLLGRAGRVKEAYQLINLIPRNFDK--AGAWSSL 689
Query: 413 LSTCANLASLELGKQLHGQLVKV 435
L C +LE+G+ L+++
Sbjct: 690 LGACRIHNNLEIGEIAAQNLIQL 712
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 260/786 (33%), Positives = 403/786 (51%), Gaps = 98/786 (12%)
Query: 88 PRRSSVSYNAMISGYLLNGQLDPARQVFDQ------MPQRDLVSWNVMISGYVRNKSLSA 141
P S +Y ++ G + G R V + + DL NV+++ Y + +
Sbjct: 424 PGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGS 483
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQ 197
A +F+ +P+R++VS+ T++ G+A G + A +F R+ E N+ +L V
Sbjct: 484 AHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVA 543
Query: 198 N-------GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
G AC L + + ++L+ + + DA+ +FD + +D V+W
Sbjct: 544 MDTLGLAWGVHACACKLGHDRNAF---VGSALIDAYSMCGVVSDARRVFDGIVGKDAVAW 600
Query: 251 NTMITGYAQNNYLAEAQRLFEE----------------------------------APVK 276
M++ Y++N+ ++F + VK
Sbjct: 601 TAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVK 660
Query: 277 DVF-----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
++ + A++ Y + G +++AR+ F+ + + + W+ MI+ Y Q + + A EL
Sbjct: 661 TLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFEL 720
Query: 332 FEAM-----------------TCKNVASW----------------------NTMITGYAQ 352
F M C N+ N +I YA+
Sbjct: 721 FIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAK 780
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
++ + +F + + +SW II GY++SG+ E +L +F EM+ + ++SV
Sbjct: 781 CSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSV 840
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L CA+ AS+ Q+H + K F + V N+L+ Y KCG + +A FE + + D+
Sbjct: 841 LRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDL 900
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWN +I+GYA HG A LF+ M IK +DIT V +LS C TGLV +G F S
Sbjct: 901 VSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDS 960
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M D+G+ P+ +HYTC+V LLGRAGRL++A N + ++P P A W ALL +C ++ E
Sbjct: 961 MRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVE 1020
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
L +AE + E+EP++ YVLLSN+Y+A+G V+ R MR+ GV+K G SW+E++
Sbjct: 1021 LGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIK 1080
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
+VH FSVG HP I A LE L K ++G+V T VLHD+ EE+K ML HSE
Sbjct: 1081 GEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSE 1140
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
+LA+AYG++ P G PIR+MKNLR C DCH K ISKIV + II+RD NRFHHF G+C
Sbjct: 1141 RLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTC 1200
Query: 773 SCGDYW 778
SCGDYW
Sbjct: 1201 SCGDYW 1206
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 169/373 (45%), Gaps = 40/373 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM--------------PRRSSVSYNAMISGYLLN 105
D W ++ + N C ++ L +F+ M R++V ++++ G ++
Sbjct: 596 DAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIH 655
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
+ ++D +R + + ++ Y + ++ AR FEM+ DV+ W+ M+S YA
Sbjct: 656 AC--SVKTLYDT--ERHV--YGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYA 709
Query: 166 QNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANW----EVV 217
Q + A +F RM+ NE S + +L A ++ + E+
Sbjct: 710 QCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELF 769
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
N+L+ + K + + IF + +EVSWNT+I GY+++ + A +F E
Sbjct: 770 VGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAAS 829
Query: 278 V----FTWTAMVSGYVQNGKVDEAR----MIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
V T+++++ ++ +I + +T+ N++I Y + + AR
Sbjct: 830 VPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAR 889
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSG 385
E+FE + ++ SWN +I+GYA G+ A+ LFD M ++ I++ A+++ +G
Sbjct: 890 EIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTG 949
Query: 386 YSEDSLRLFIEMK 398
L LF M+
Sbjct: 950 LVSQGLSLFDSMR 962
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/467 (46%), Positives = 297/467 (63%), Gaps = 1/467 (0%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
+++I Y K + A++LF + ++V SWN MI GY + E+ HAR +FDRM D I
Sbjct: 205 SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVI 264
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
SW +I GYA G ++L LF +M+ G + + S+LS CA+L +L+ G LH +
Sbjct: 265 SWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYI 324
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
E VG AL+ MY KCG + A F + KDV++WNT+IAG A HG K+A
Sbjct: 325 NDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQ 384
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
LF+ MK G++P+DIT V ILSACSH G+V++G + M+ YG+ P +HY C++DL
Sbjct: 385 QLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDL 444
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
L RAG L+EA L+ MP EP+ + GALLG CR++G EL E + + ++P ++G Y
Sbjct: 445 LARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRY 504
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
+LLSN+YAA+ +W D KVR M+ G+ KV G S +E++ VH F GD HPE ++IY
Sbjct: 505 ILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIY 564
Query: 673 AYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
L E+ +LK G+ T VL D+ EE+KEH L HSEKLA+AYG+L + + IR+
Sbjct: 565 EKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRI 624
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLRVC DCH+ IK ISK+ GR II+RD NRFHHF G CSC D+W
Sbjct: 625 VKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 14/236 (5%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
HV S S +++I Y L A+Q+F+ RD+VSWN MI GYV++ +
Sbjct: 191 HVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGH 250
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ 197
AR +F+ M RDV+SWNTM++GYA G + A +FD+M ++ E + LL+A
Sbjct: 251 ARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAH 310
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGG-----FVKQKRLGDAKWIFDRMPVRDEVSWNT 252
G +++ L + N + NS++G + K ++ A +F+ M +D ++WNT
Sbjct: 311 LGALDKGLHL-HTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNT 369
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
+I G A + + EAQ+LF+E V T+ A++S G VDE + + D M
Sbjct: 370 IIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCM 425
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 18/258 (6%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+A +FN R VS+NAMI GY+ + ++ AR VFD+M RD++SWN MI+GY
Sbjct: 219 AAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGK 278
Query: 139 LSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARR----IFDRMLEKNEISWNG 190
+ A LF+ M V + ++LS A G D I D +E N I
Sbjct: 279 PNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTA 338
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----D 246
L+ Y + G+I A +F + + +V++WN+++ G + +A+ +F M +
Sbjct: 339 LVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPN 398
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIF 301
++++ +++ + + E Q+L + V + ++ + G ++EA +
Sbjct: 399 DITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELI 458
Query: 302 DAMP-EKNTVSWNAMIAG 318
MP E N + A++ G
Sbjct: 459 GTMPMEPNPSALGALLGG 476
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ WN I ++++ A VF+ M R +S+N MI+GY + G+ + A +FDQM
Sbjct: 231 DVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMR 290
Query: 119 ------PQRDLVSW--------------------------------NVMISGYVRNKSLS 140
+ +VS ++ Y + +S
Sbjct: 291 AVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKIS 350
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A +F M +DV++WNT+++G A +G A+++F M +E N+I++ +L+A
Sbjct: 351 LATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACS 410
Query: 197 QNGRIEEA-----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
G ++E CM +V + ++ + L +A + MP+ S
Sbjct: 411 HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPS 468
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/615 (36%), Positives = 359/615 (58%), Gaps = 10/615 (1%)
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV----SWNSLMGGFVK 228
A +FD + E +SWN L+ Y++N R +A LF K + V + ++ G +
Sbjct: 68 AHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALF-CKLLCDFVPDSFTLPCVLKGCAR 126
Query: 229 QKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
L + K I + D+ +++++ Y++ + +++F+ KDV +W ++
Sbjct: 127 LGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSL 186
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
+ GY + G+++ A +F+ MPEK++ SW +I G ++ +++ AR++F+ M +N SWN
Sbjct: 187 IDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWN 246
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
MI GY ++G+ A+ LFD+MP+ ++W ++I GY ++ +L+LF M R
Sbjct: 247 AMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISP 306
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N + +S + + SL G+ +H +VK GF+ +G L+ MY KCGSV+ A F
Sbjct: 307 NYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVF 366
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
I K + W ++I G HG + L LF+ M G+KP IT +G+L+ACSH G E
Sbjct: 367 RSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAE 426
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
YF M DYG+ P+ +HY C++D+L RAG L+EA++ ++ MP + + W +LL
Sbjct: 427 DAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSG 486
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
R +G + E AA+ + ++ P+ G YV+LSN+YAA+G W V +VR M+ +G+KK
Sbjct: 487 SRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDP 546
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE-EK 703
G S +E Q +H F VGD HP+ + IY L E++ KL G + T VL + E+ EK
Sbjct: 547 GCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEK 606
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E L HSE+LA+A+G+L+I G PIR++KNLR+C DCH K +S I R II+RD +R
Sbjct: 607 EAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSR 666
Query: 764 FHHFSGGSCSCGDYW 778
FHHF GSCSC D+W
Sbjct: 667 FHHFKSGSCSCKDFW 681
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 210/445 (47%), Gaps = 59/445 (13%)
Query: 99 ISGYLLNGQLDP-------ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF----- 146
+S LL DP A +FD + + LVSWN++I Y+ N+ + A LF
Sbjct: 49 VSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLC 108
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIE 202
+ +P D + +L G A+ G ++I +L+ ++ + L++ Y + G IE
Sbjct: 109 DFVP--DSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIE 166
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
+F+ + +VVSWNSL+ G+ + + A +F+ MP +D SW +I G +++
Sbjct: 167 LCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGK 226
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
L A+ +F+ P+++ +W AM++GY++ G + A+ +FD MPE++ V+WN+MI GY +
Sbjct: 227 LEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERN 286
Query: 323 KRMDMARELFEAMTCKNVASWNTMITG--------------------------------- 349
K+ A +LFE M ++++ T I G
Sbjct: 287 KQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLG 346
Query: 350 ------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
Y++ G + A +F +P+ W ++I G G E +L LF EM R G +
Sbjct: 347 TLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLK 406
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ F VL+ C++ E + + G + L+ + C+ G +EEA
Sbjct: 407 PHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKD 466
Query: 463 AFEEI-VDKDVISWNTMIAGYARHG 486
E + + + + W ++++G +HG
Sbjct: 467 TIERMPIKANKVIWTSLLSGSRKHG 491
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 171/321 (53%), Gaps = 18/321 (5%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
VF+ M + VS+N++I GY G+++ A ++F++MP++D SW ++I G ++ L AA
Sbjct: 171 VFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAA 230
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
R++F+ MP R+ VSWN M++GY + G ++ A+ +FD+M E++ ++WN ++ Y +N +
Sbjct: 231 RDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFT 290
Query: 203 EACMLFESKANWEVV-SWNSLMGGFVKQK---RLGDAKWIFDRMPVR----DEVSWNTMI 254
+A LFE ++ ++ +++G LG +W+ + D V +I
Sbjct: 291 KALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLI 350
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTV 310
Y++ + A R+F P K + WT+++ G +G V++ +FD M + + +
Sbjct: 351 EMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAI 410
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDR 365
++ ++ + A F+ MT ++ + +I ++G + A++ +R
Sbjct: 411 TFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIER 470
Query: 366 MP-QHDCISWAAIIAGYAQSG 385
MP + + + W ++++G + G
Sbjct: 471 MPIKANKVIWTSLLSGSRKHG 491
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYC--KCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
QLH +K V + LL +Y + +++ A+ F+ I + ++SWN +I Y
Sbjct: 33 QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
+ DA+ LF + PD T+ +L C+ G +++G + + + G +
Sbjct: 93 NQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQ-IHGLVLKIGFGVDKF 150
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ +V + + G ++ + + M + D +W +L+ G+ EL A E+ EM
Sbjct: 151 VLSSLVSMYSKCGEIELCRKVFDRME-DKDVVSWNSLIDGYARCGEIEL---ALEMFEEM 206
Query: 605 EPENAGMYVLLSNLYAASGR 624
+++ + +L + + SG+
Sbjct: 207 PEKDSFSWTILIDGLSKSGK 226
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/645 (35%), Positives = 365/645 (56%), Gaps = 23/645 (3%)
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
++ N++++ YA+ A +FDRM E+N +SW+ L+ Y+ NG + L + +
Sbjct: 66 IIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMIS 125
Query: 214 WEVVSWNSLM----------GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
VS N + G V++ R + + V N +++ Y++ + +
Sbjct: 126 EGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVR-NALVSMYSKCSIV 184
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM-------I 316
+A ++ E PV D+ + +++S V+NG + E + +M + +V W+ + +
Sbjct: 185 QDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSE-SVKWDKVTFVNAFSL 243
Query: 317 AGYVQTKRMDM---ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
++ R+ + + L + C S + +I Y + G+ AR +FD + + +
Sbjct: 244 CASLKDLRLGLHVHGKMLTSDVECDAYVS-SAIINMYGKCGKSLMARGVFDGLQSRNVVL 302
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W A++A Q+G E++L LF +M++ + N + +L+ CA L++ G LHG
Sbjct: 303 WTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSE 362
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K GF+ VGNAL+ MY K G +E A F +++ +D+I+WN MI G++ HG GK AL+
Sbjct: 363 KSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALL 422
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
+F+ M P+ +T G+LSAC H GLV++G Y + + + +GV P +HYTC+V LL
Sbjct: 423 VFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLL 482
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
+ G+L+EA+N M+ P + D W LL AC ++ L AE + EM+P + G Y
Sbjct: 483 SKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYT 542
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LLSN+YA RW V KVR MRD+ +KK G SW+E+ N H F+ D HP+ + Y
Sbjct: 543 LLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQ 602
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
++EL +K G+ VLHDV +E+KE+ L YHSEKLA+AYG+L +P+ I V+K
Sbjct: 603 KVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIK 662
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLR+C+DCH+A++ ISK+ R+I++RD NRFHHF G CSC DYW
Sbjct: 663 NLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 215/494 (43%), Gaps = 97/494 (19%)
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
V + + ++ N +I+ Y + +S A NLF+ MP+R+VVSW+ +++GY NG++
Sbjct: 57 VTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKV 116
Query: 174 RRIFDRMLEKNEISWNGLLAAYV-----QNGRIEEA--C--MLFESKANWEVVSWNSLMG 224
R+ M+ + +S N + A GR+EE C +L ++ ++ N+L+
Sbjct: 117 IRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVS 176
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------------ 272
+ K + DA +++ +PV D V++N++++ +N YL E +
Sbjct: 177 MYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVT 236
Query: 273 --------APVKDV-------------------FTWTAMVSGYVQNGKVDEARMIFDAMP 305
A +KD+ + +A+++ Y + GK AR +FD +
Sbjct: 237 FVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQ 296
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----------------------- 342
+N V W A++A Q + A LF M +NV S
Sbjct: 297 SRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSL 356
Query: 343 ----------------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
N +I YA+SG+I A+ +F M D I+W A+I G++ G
Sbjct: 357 LHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGL 416
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGN 445
+ +L +F +M E N FT VLS C +L ++ G LH + + G + G
Sbjct: 417 GKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYT 476
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNTMIAG---YARHGFGKDALMLFESMKTV 501
++ + K G + EA + K DV++W T++ + +G G+ + + +
Sbjct: 477 CIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGR-----WVAEFVL 531
Query: 502 GIKPDDITMVGILS 515
+ P+D+ +LS
Sbjct: 532 EMDPNDVGTYTLLS 545
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 145/278 (52%), Gaps = 12/278 (4%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
T ++ N++I YA+ +++ A NLFDRMP+ + +SW+A++ GY +G+S +RL
Sbjct: 62 TENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLK 121
Query: 396 EMKRYGERLNRSPFTSVL----STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+M G N SP +L S+C + +E G+Q HG L+K GF +V NAL+ MY
Sbjct: 122 DMISEG---NVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMY 178
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KC V++A + E+ D++++N++++ +G+ ++ L + SM + +K D +T V
Sbjct: 179 SKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFV 238
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
S C+ + G M V ++ + ++++ G+ G+ A+ + +
Sbjct: 239 NAFSLCASLKDLRLGLHVHGKMLTS-DVECDAYVSSAIINMYGKCGKSLMARGVFDGLQ- 296
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
+ W A++ +C G E+A + +ME EN
Sbjct: 297 SRNVVLWTAVMASCFQNG---CFEEALNLFSKMEQENV 331
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 148/342 (43%), Gaps = 30/342 (8%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ + + A+ V+N +P V+YN+++S + NG L +V M V
Sbjct: 172 NALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSES-V 230
Query: 125 SWN--VMISGYVRNKSLSAARNLFEMMPKR-------DVVSWNTMLSGYAQNGYADAARR 175
W+ ++ + SL R + K D + +++ Y + G + AR
Sbjct: 231 KWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARG 290
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG-D 234
+FD + +N + W ++A+ QNG EEA LF SK E V N + G
Sbjct: 291 VFDGLQSRNVVLWTAVMASCFQNGCFEEALNLF-SKMEQENVKSNEFTYAVLLNACAGLS 349
Query: 235 AKWIFDRMPVRDEVS--------WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
A+ + E S N +I YA++ + A+++F + +D+ TW AM+
Sbjct: 350 ARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMIC 409
Query: 287 GYVQNGKVDEARMIFDAM----PEKNTVSWNAMIA-----GYVQTKRMDMARELFEAMTC 337
G+ +G +A ++F M N V++ +++ G VQ + + +
Sbjct: 410 GFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQ 469
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
+ + +++ +++G++ ARN P + D ++W ++
Sbjct: 470 PGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLL 511
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 32/282 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL----------NGQLD 109
++ W + + +NGC + AL++F+ M + +V N LL NG L
Sbjct: 299 NVVLWTAVMASCFQNGCFEEALNLFSKM-EQENVKSNEFTYAVLLNACAGLSARRNGSLL 357
Query: 110 PARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+V N +I+ Y ++ + AA+ +F M RD+++WN M+ G++ +G
Sbjct: 358 HGHSEKSGFKHHVMVG-NALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGL 416
Query: 170 ADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIEEAC-----MLFESKANWEVVSWN 220
A +F ML E +++ G+L+A G ++E ++ + + +
Sbjct: 417 GKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYT 476
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG-YAQNNY-LAE--AQRLFEEAPV 275
++ K +L +A+ PV+ D V+W T++ + NY L A+ + E P
Sbjct: 477 CIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDP- 535
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VSW 312
DV T+T + + Y + + D + M +K VSW
Sbjct: 536 NDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSW 577
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/614 (37%), Positives = 352/614 (57%), Gaps = 52/614 (8%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRL-- 269
VV+W SL+ G V +R A F M + ++ ++ + A + ++L
Sbjct: 74 VVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHA 133
Query: 270 --FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ + DVF + Y + G EAR +FD MP +N +WNA ++ VQ R
Sbjct: 134 LALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLD 193
Query: 328 ARELFEAMTC---------------------------------------KNVASWNTMIT 348
A F+ C ++V+ +N +I
Sbjct: 194 AIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLID 253
Query: 349 GYAQSGEITHARNLFDRMP--QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
Y + G+I + +F R+ + + +SW +++A Q+ E + +F++ ++ E +
Sbjct: 254 FYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDF 313
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+SVLS CA L LELG+ +H +K E FVG+AL+ +Y KCGS+E A F E
Sbjct: 314 M-ISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFRE 372
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKT--VGIKPDDITMVGILSACSHTGLVE 524
+ ++++++WN MI GYA G AL LF+ M + GI +T+V +LSACS G VE
Sbjct: 373 MPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVE 432
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + F SM YG+ P ++HY C+VDLLGR+G +D A +K MP P + WGALLGA
Sbjct: 433 RGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGA 492
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+++GKT+L + AAE +FE++P+++G +V+ SN+ A++GRW + + VR +MRD G+KK
Sbjct: 493 CKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNV 552
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
GYSW+ V+N+VH F D+ H + I A L +L ++K+ G+V L L D+ EEEK
Sbjct: 553 GYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKA 612
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
+ YHSEK+A+A+G++++P G PIR+ KNLR+C DCH+AIK ISKIVGR II+RDNNRF
Sbjct: 613 SEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRF 672
Query: 765 HHFSGGSCSCGDYW 778
H F G CSC DYW
Sbjct: 673 HRFKDGWCSCKDYW 686
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 156/355 (43%), Gaps = 37/355 (10%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRD 122
A + + G A ++F+ MP R+ ++NA +S + +G+ A F + + +
Sbjct: 150 AFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPN 209
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIFD 178
+++ ++ SL R L + + DV +N ++ Y + G ++ +F
Sbjct: 210 AITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFS 269
Query: 179 RMLE--KNEISWNGLLAAYVQNGRIEEACMLF-ESKANWE--------VVSWNSLMGGFV 227
R+ +N +SW LLAA VQN E ACM+F +++ E V+S + +GG
Sbjct: 270 RIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGL- 328
Query: 228 KQKRLGDAKWIFDRMPVRDEVSW--NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
LG + +E + + ++ Y + + A+++F E P +++ TW AM+
Sbjct: 329 ---ELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMI 385
Query: 286 SGYVQNGKVDEARMIFDAMPEKNT------VSWNAMIAGYVQTKRMDMARELFEAMTCK- 338
GY G VD A +F M + V+ ++++ + ++ ++FE+M +
Sbjct: 386 GGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRY 445
Query: 339 ----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAGYAQSGYSE 388
+ ++ +SG + A RMP IS W A++ G ++
Sbjct: 446 GIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTK 500
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 175/448 (39%), Gaps = 103/448 (22%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
+SA V + R+ V++ ++ISG + N + A F M +R+ V N V
Sbjct: 60 NSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNM-RRECVLPNDFTFPCVFKA 118
Query: 138 SLS-----AARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
S S + L + K DV + Y++ G AR +FD M +N +W
Sbjct: 119 SASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATW 178
Query: 189 NGLLAAYVQNGRIEEACMLFE--------------------------------------- 209
N ++ VQ+GR +A F+
Sbjct: 179 NAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVR 238
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV--RDEVSWNTMITGYAQNNYLAEAQ 267
S+ +V +N L+ + K + ++ +F R+ R+ VSW +++ QN+ A
Sbjct: 239 SRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERAC 298
Query: 268 RLFEEA-----PV---------------------------------KDVFTWTAMVSGYV 289
+F +A P +++F +A+V Y
Sbjct: 299 MVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYG 358
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT---CKNVASWNTM 346
+ G ++ A +F MPE+N V+WNAMI GY +DMA LF+ MT C S+ T+
Sbjct: 359 KCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTL 418
Query: 347 I---TGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMK 398
+ + +++G + +F+ M I +A ++ +SG + R + +K
Sbjct: 419 VSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVD---RAYEFIK 475
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGK 426
R S + ++L C +LGK
Sbjct: 476 RMPILPTISVWGALLGACKMHGKTKLGK 503
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 168/398 (42%), Gaps = 36/398 (9%)
Query: 42 KRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNA 97
K L ++RN ++ WN ++ +++G C A+ F +++++ A
Sbjct: 156 KTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCA 215
Query: 98 MISGYLLNGQLDPARQ----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM--PK 151
++ L+ RQ + + D+ +N +I Y + + ++ +F + +
Sbjct: 216 FLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGR 275
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIF---DRMLEKNEISWNGLLAAYVQNGRIEEA---- 204
R+VVSW ++L+ QN + A +F + +E + + +L+A + G +E
Sbjct: 276 RNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVH 335
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+ ++ + ++L+ + K + A+ +F MP R+ V+WN MI GYA +
Sbjct: 336 ALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVD 395
Query: 265 EAQRLFEEAPVKDV------FTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSWN 313
A LF+E T +++S + G V+ IF++M E +
Sbjct: 396 MALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYA 455
Query: 314 AMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMIT-----GYAQSGEITHARNLFDRMP 367
++ ++ +D A E + M ++ W ++ G + G+I A LF+ P
Sbjct: 456 CVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIA-AEKLFELDP 514
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
D + A +G E++ + EM+ G + N
Sbjct: 515 D-DSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKN 551
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 3/160 (1%)
Query: 424 LGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
LG+ +H +++ F+ N L+ MY K A + V++W ++I+G
Sbjct: 25 LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGC 84
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+ AL+ F +M+ + P+D T + A + + G + +++ G I +
Sbjct: 85 VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQ-LHALALKGGNILD 143
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
D+ + G EA+N+ MP + ATW A +
Sbjct: 144 VFVGCSAFDMYSKTGLRPEARNMFDEMPHR-NLATWNAYM 182
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 267/832 (32%), Positives = 432/832 (51%), Gaps = 72/832 (8%)
Query: 12 SSCILHQHTQSI---NRLQSPANTNPYPSKKTLK-RHLNSKSRNKPKPAGDWDIRQWNVA 67
++ LHQ + + Q P N++ K ++ + L+ K G ++I + A
Sbjct: 4 TTTTLHQSSSPLLLPTTTQKPKNSSLQTCKTLIELKQLHCNMLKK----GVFNINKLIAA 59
Query: 68 ITTHMRNGCCDSALHVF--NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-----Q 120
+ + AL+ F + + S + N +I GY +G A ++ M
Sbjct: 60 CVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIV 119
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRI 176
D ++ ++S + + S + ++ K +D+ N+++ YA G D R++
Sbjct: 120 PDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKV 179
Query: 177 FDRMLEKNEISWNGLLAAY-VQNGRIEEACMLFE-------------------------- 209
FD MLE+N +SW L+ Y V N E C+ FE
Sbjct: 180 FDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDL 239
Query: 210 --------------SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
K+N VV N+L+ ++K + + IFD ++ V +NT+++
Sbjct: 240 ELGKKVCNLMTELGVKSNTLVV--NALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMS 297
Query: 256 GYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVS-----GYVQNGKVDEARMIFDAMPE 306
Y Q+ E + +E K D T + ++ G + GK A + + +
Sbjct: 298 NYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLER 357
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
+ +S NA+I Y++ + + A ++F++M+ K V +WN++I G + GE+ A +F M
Sbjct: 358 LDNIS-NAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEM 416
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
P+ + +SW +I Q+ E+++ L EM+ G + +R + S C L +L+L K
Sbjct: 417 PESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAK 476
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
++ + K +G AL+ M+ +CG A FE + +DV +W I A G
Sbjct: 477 WIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEG 536
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
K A+ LF+ M +K DD V +L+A SH G V++G + F++M + +GV P HY
Sbjct: 537 NAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHY 596
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
CMVDLLGRAG L+EA +LMK+MP +P+ WG+ L ACR + E A A E I ++ P
Sbjct: 597 GCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAP 656
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
E G++VLLSN+YA++G+W DV++VRL+M+++G +KV G S +EV + F+ GD H
Sbjct: 657 EKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHT 716
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
E +I L+E+ ++ Q G+V T VL DV E+EKEH+L HSEKLA+AYG+++ G
Sbjct: 717 ENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKG 776
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
PIRV+KNLR+C DCH+ K +SK+ GR I +RDNNR+H F G CSC D+W
Sbjct: 777 IPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/683 (36%), Positives = 369/683 (54%), Gaps = 67/683 (9%)
Query: 105 NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
+G L AR VF+Q+P + N +I GY NK+L LF + ML G
Sbjct: 87 SGSLPYARLVFNQIPNPTTFTCNSIIRGYT-NKNLPRQAILFYQL---------MMLQGL 136
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
D R F + + + G
Sbjct: 137 ------DPDRFTFPSLFKSCGVLCEG---------------------------------- 156
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
KQ K F D NT++ Y+ L A+++F++ K V +W M
Sbjct: 157 ---KQLHCHSTKLGF----ASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATM 209
Query: 285 VSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+ Y Q EA +F M + N ++ ++ +++ ++ A+++ + + +
Sbjct: 210 IGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGI 269
Query: 341 ASWNTMITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++T++T Y + G AR+LF++MP+ + W +I G+ + E++L LF
Sbjct: 270 G-FHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFN 328
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
EM+ G + ++ S+L C +L +LELGK LH + K E +G AL+ MY KCG
Sbjct: 329 EMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG 388
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
S+E A F+E+ +KDV++W +I G A G G AL LF M+ +KPD IT VG+L+
Sbjct: 389 SIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLA 448
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH GLV +G YF SM YG+ P+ +HY CMVD+LGRAGR+ EA++L++NMP PD
Sbjct: 449 ACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDY 508
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
LL ACR++G +AE+AA+ + E++P+N G YVLLSN+Y++ W K+R M
Sbjct: 509 FVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELM 568
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+R +KK G S +EV VH F GD HP+ IY L+++ +LK G+V VL
Sbjct: 569 VERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVL 628
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
D+ E+EKE+ L HSEKLA+A+G+LS G PIRV+KNLRVC DCH+A+K IS++ R
Sbjct: 629 FDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNRE 688
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
II+RD NRFHHF+ GSCSC D+W
Sbjct: 689 IIVRDRNRFHHFTKGSCSCRDFW 711
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 210/497 (42%), Gaps = 89/497 (17%)
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY----------------LLNGQLD 109
VA +G A VFN +P ++ + N++I GY +L G LD
Sbjct: 79 VAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQG-LD 137
Query: 110 PARQVFDQMPQRDLVSWNVMISG---YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
P R F + S V+ G + + L A D NT+++ Y+
Sbjct: 138 PDRFTFPSL----FKSCGVLCEGKQLHCHSTKLGFAS---------DAYIQNTLMNMYSN 184
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSL 222
G +AR++FD+M+ K+ +SW ++ AY Q EA LF V ++ ++
Sbjct: 185 CGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNV 244
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDE--VSWNTMITG-----YAQNNYLAEAQRLFEEAPV 275
+ + + L AK + + DE + ++T++T Y + A+ LF + P
Sbjct: 245 LTACARSRDLETAKQVHKYI---DETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPE 301
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAREL 331
K++F W M++G+V++ +EA +F+ M + + V+ +++ +++ + L
Sbjct: 302 KNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWL 361
Query: 332 FEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ + +VA ++ YA+ G I A +F MP+ D ++W A+I G A G
Sbjct: 362 HVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQG 421
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+L LF EM+ + + F VL+ C+ H LV G N++
Sbjct: 422 LKALELFHEMQMSEVKPDAITFVGVLAACS-----------HAGLVNEGIA----YFNSM 466
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
Y S+E + M+ R G +A L ++M + PD
Sbjct: 467 PNKYGIQPSIEH---------------YGCMVDMLGRAGRIAEAEDLIQNMP---MAPDY 508
Query: 508 ITMVGILSACS-HTGLV 523
+VG+LSAC H LV
Sbjct: 509 FVLVGLLSACRIHGNLV 525
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 149/328 (45%), Gaps = 25/328 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----Q 120
N + + GC SA VF+ M +S VS+ MI Y A ++F +M +
Sbjct: 176 NTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVK 235
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRI 176
+ ++ +++ R++ L A+ + + + + + V + ++ Y + G AR +
Sbjct: 236 PNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDL 295
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRL 232
F++M EKN WN ++ +V++ EEA LF S + V+ SL+ L
Sbjct: 296 FNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGAL 355
Query: 233 GDAKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
KW+ ++ + +V+ T ++ YA+ + A R+F+E P KDV TWTA++ G
Sbjct: 356 ELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGL 415
Query: 289 VQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----N 339
G+ +A +F M + + +++ ++A ++ F +M K +
Sbjct: 416 AMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPS 475
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMP 367
+ + M+ ++G I A +L MP
Sbjct: 476 IEHYGCMVDMLGRAGRIAEAEDLIQNMP 503
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 118/267 (44%), Gaps = 23/267 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPAR----QVF 115
WN+ I H+ + + AL +FN M + V+ +++ G L+ + +
Sbjct: 307 WNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIE 366
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ + D+ ++ Y + S+ +A +F+ MP++DV++W ++ G A G A
Sbjct: 367 KEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALE 426
Query: 176 IFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN-----WEVVSWNSLMGGF 226
+F M ++ + I++ G+LAA G + E F S N + + ++
Sbjct: 427 LFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDML 486
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ---NNYLAE--AQRLFEEAPVKDVFTW 281
+ R+ +A+ + MP+ + + + N +AE AQ+L E P K+ T+
Sbjct: 487 GRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDP-KNGGTY 545
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ + Y + A+ + + M E+N
Sbjct: 546 VLLSNIYSSMKNWEAAKKMRELMVERN 572
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/576 (39%), Positives = 339/576 (58%), Gaps = 46/576 (7%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV---DEARMIFD 302
D + N ++ Y++ +L E+ R + +VF + V+ V D R IF+
Sbjct: 140 DLYTGNALMNMYSKLRFLEESGR--QRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFE 197
Query: 303 AMPEKNTVSWNAMIAG------YVQTKRM---------------------------DMAR 329
MPEK+ VSWN +IAG Y +T RM D++R
Sbjct: 198 MMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISR 257
Query: 330 ELFEAMTCK-------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
E C ++ +++I YA+ + + +F + + D ISW +IIAG
Sbjct: 258 GK-EIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
Q+G ++ LR F +M + F+S++ CA+L +L LGKQLHG + + GF+ F
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIF 376
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+ ++L+ MY KCG++ A F+ + +D++SW MI G A HG DA+ LFE M+T G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
IKP+ + + +L+ACSH GLV++ +YF SM RD+G+ P +HY + DLLGRAGRL+EA
Sbjct: 437 IKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 496
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ + M P + W LL ACR++ ++AEK A I E++P N G Y+LL+N+Y+A+
Sbjct: 497 YDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 556
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
RW + +K R MR G++K SW+EV+NKV+ F GD HP ++I +E L +
Sbjct: 557 RRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELM 616
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
+++G+V T V HDV EE+K++++ HSE+LA+ +GI++ PAG IRV KNLRVC DCH
Sbjct: 617 EKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCH 676
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A K ISKIVGR I++RDN+RFHHF G+CSCGDYW
Sbjct: 677 TATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 34/256 (13%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+ + ++W ++I Y G SL FI M G + + F SVL +CA L
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA--------------------- 460
L LG+ LHG +++VG + + GNAL+ MY K +EE+
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181
Query: 461 -----------YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
FE + +KD++SWNT+IAG AR+G ++ L + M +KPD T
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ +L + + +G E + + G+ + + ++D+ + R+ ++ + +
Sbjct: 242 LSSVLPLIAENVDISRGKE-IHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF-TL 299
Query: 570 PFEPDAATWGALLGAC 585
E D +W +++ C
Sbjct: 300 LTERDGISWNSIIAGC 315
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 90/305 (29%)
Query: 83 VFNSMPRRS-SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN----K 137
VF+ M R+ SV +++S D R++F+ MP++DLVSWN +I+G RN +
Sbjct: 170 VFDEMTERTRSVRTVSVLSE-------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEE 222
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQN------------------------------ 167
+L R + K D + +++L A+N
Sbjct: 223 TLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLID 282
Query: 168 GYADAAR-----RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVS 218
YA R R+F + E++ ISWN ++A VQNG +E F +K + S
Sbjct: 283 MYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYS 342
Query: 219 WNSLMGG-----------------------------------FVKQKRLGDAKWIFDRMP 243
++S+M + K + AK IFDRM
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARM 299
+RD VSW MI G A + +A LFE+ + + + A+++ G VDEA
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWK 462
Query: 300 IFDAM 304
F++M
Sbjct: 463 YFNSM 467
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
++++ Y G + A+Q+FD+M RD+VSW MI G + A LFE M +
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK 438
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN-----GRIEEA 204
V++ +L+ + G D A + F+ M I+ A V + GR+EEA
Sbjct: 439 PNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 496
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 266/851 (31%), Positives = 400/851 (47%), Gaps = 161/851 (18%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-E 147
R V +I+ Y G +R VFD ++DL +N ++SGY RN A +LF E
Sbjct: 125 RNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLE 184
Query: 148 MMPKRDVVS---------------------------------------WNTMLSGYAQNG 168
++ D+ N +++ Y + G
Sbjct: 185 LLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCG 244
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC----------------------- 205
+ ++A ++F+ M +N +SWN ++ A +NG E C
Sbjct: 245 FVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVT 304
Query: 206 -------------------MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+ F+ EV NSL+ + K LG+A+ +FD ++
Sbjct: 305 VIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKN 364
Query: 247 EVSWNTMITGYAQNN-------YLAEAQR------------------------------- 268
VSWNT+I GY++ L E QR
Sbjct: 365 VVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIH 424
Query: 269 --LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
F +KD A V+ Y + +D A +F M K SWNA+I + Q
Sbjct: 425 GYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPG 484
Query: 327 MARELFEAM-----------------TCKNVASWN----------------------TMI 347
+ +LF M C + +++
Sbjct: 485 KSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLM 544
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
+ Y Q + + +FD+M + W +I G++Q+ ++L F +M G +
Sbjct: 545 SLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEI 604
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
T VL C+ +++L LGK++H +K FV AL+ MY KCG +E++ + F+ +
Sbjct: 605 AVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRV 664
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+KD WN +IAGY HG G A+ LFE M+ G +PD T +G+L AC+H GLV +G
Sbjct: 665 NEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGL 724
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+Y M YGV P +HY C+VD+LGRAG+L EA L+ MP EPD+ W +LL +CR
Sbjct: 725 KYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRN 784
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
YG E+ E+ ++ + E+EP A YVLLSNLYA G+W +V KVR +M++ G+ K G S
Sbjct: 785 YGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCS 844
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
W+E+ V+ F V D E +I +LE K+ + G+ T VLH++ EE K +L
Sbjct: 845 WIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKIL 904
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
+ HSEKLA+++G+L+ G +RV KNLR+C DCHNAIK +SK+V R II+RDN RFHHF
Sbjct: 905 KSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHF 964
Query: 768 SGGSCSCGDYW 778
G C+CGD+W
Sbjct: 965 KNGLCTCGDFW 975
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 191/470 (40%), Gaps = 105/470 (22%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ---- 120
N + + + G A +F+ ++ VS+N +I GY G ++ +M +
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKV 397
Query: 121 ------------------------------------RDLVSWNVMISGYVRNKSLSAARN 144
+D + N ++ Y + SL A
Sbjct: 398 RVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAER 457
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF----DRMLEKNEISWNGLLAA-----Y 195
+F M + V SWN ++ +AQNG+ + +F D ++ + + LL A +
Sbjct: 458 VFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKF 517
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
++ G+ ML E + SLM +++ + K IFD+M + V WN MIT
Sbjct: 518 LRCGKEIHGFMLRNGLELDEFIGI-SLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMIT 576
Query: 256 GYAQNNYLAEAQRLF----------EEAPV-----------------------------K 276
G++QN EA F +E V +
Sbjct: 577 GFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSE 636
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D F A++ Y + G +++++ IFD + EK+ WN +IAGY A ELFE M
Sbjct: 637 DAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQ 696
Query: 337 CK----NVASWNTMITGYAQSGEITHA-------RNLFDRMPQHDCISWAAIIAGYAQSG 385
K + ++ ++ +G +T +NL+ P+ + +A ++ ++G
Sbjct: 697 NKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLE--HYACVVDMLGRAG 754
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++L+L EM + + ++S+LS+C N LE+G+++ +L+++
Sbjct: 755 QLTEALKLVNEMP---DEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLEL 801
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISG---YLLNGQLDPA 111
+ WN I H +NG +L +F M P R ++ + +L G+
Sbjct: 467 VSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHG 526
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + + + + ++M S Y++ S+ + +F+ M + +V WN M++G++QN
Sbjct: 527 FMLRNGLELDEFIGISLM-SLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPC 585
Query: 172 AARRIFDRML----EKNEISWNGLLAAYVQNG--RIEEACMLFESKANW--EVVSWNSLM 223
A F +ML + EI+ G+L A Q R+ + F KA+ + +L+
Sbjct: 586 EALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALI 645
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVF 279
+ K + ++ IFDR+ +DE WN +I GY + + +A LFE K D F
Sbjct: 646 DMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSF 705
Query: 280 TWTAMVSGYVQNGKVDEA 297
T+ ++ G V E
Sbjct: 706 TFLGVLIACNHAGLVTEG 723
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/524 (40%), Positives = 319/524 (60%), Gaps = 39/524 (7%)
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMARELF------EAMTCKNVASW 343
VD R IF+ MPEK+ VSWN +IAG + + + M RE+ ++ T +V
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 344 -----------------------------NTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+++I YA+ + + +F + + D ISW
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+IIAG Q+G ++ L+ F +M + F+S++ CA+L +L LGKQLHG + +
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
GF+ F+ ++L+ MY KCG++ A F+ + +D++SW MI G A HG DA+ L
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
FE MKT GI+P+ + + +L+ACSH GLV++ +YF SM D+G+ P +HY + DLLG
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLG 549
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAGRL+EA + + MP P + W LL ACR++ ++AEK A I E++P+N G Y+L
Sbjct: 550 RAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYIL 609
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
L+N+Y+A+ RW + +K R +R G++K SW+EV+NKV+ F GD HP ++I
Sbjct: 610 LANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREA 669
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
+E L ++++G+V T V HDV EE+K++++ HSE+LA+ +GI++ PAG IRV KN
Sbjct: 670 MEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKN 729
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LRVC DCH A K ISKIVGR I++RDN+RFHHF G+CSCGDYW
Sbjct: 730 LRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 5/261 (1%)
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I + S + R +F+ MP+ D +SW IIAG A++G ++L + EM + +
Sbjct: 241 IKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDS 300
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+SVL A + GK++HG ++ G +A +V ++L+ MY KC V ++Y F
Sbjct: 301 FTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTL 360
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ ++D ISWN++IAG ++G + L F M IKP + I+ AC+H + G
Sbjct: 361 LTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 420
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ + R+ G N + +VD+ + G + A+ + M D +W A++ C
Sbjct: 421 KQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCA 478
Query: 587 LYGKTELAEKAAEVIFEMEPE 607
L+G A A E+ +M+ E
Sbjct: 479 LHGH---ALDAIELFEQMKTE 496
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 53/281 (18%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA 193
S+ + R +FEMMP++D+VSWNT+++G A+NG + M L+ + + + +L
Sbjct: 249 SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLP 308
Query: 194 AYVQN-----GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
+N G+ C + + + EV +SL+ + K R+ D+ +F + RD +
Sbjct: 309 LIAENVDISKGKEIHGCSIRQG-LDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGI 367
Query: 249 SWNTMITGYAQNNYLAEAQRLFEE---APVK----------------------------- 276
SWN++I G QN E + F + A +K
Sbjct: 368 SWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 427
Query: 277 -------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
++F +++V Y + G + AR IFD M ++ VSW AMI G A
Sbjct: 428 TRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAI 487
Query: 330 ELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRM 366
ELFE M + N ++ ++T + +G + A F+ M
Sbjct: 488 ELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSM 528
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 53/281 (18%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTMLSG 163
+D R++F+ MP++DLVSWN +I+G RN ++L+ R + K D + +++L
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 164 YAQN------------------------------GYADAAR-----RIFDRMLEKNEISW 188
A+N YA R R+F + E++ ISW
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 189 NGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
N ++A VQNG +E F +K + S++S+M L K + +
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI-T 428
Query: 245 RDEVSWNTMITG-----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
R+ N I YA+ + A+++F+ ++D+ +WTAM+ G +G +A
Sbjct: 429 RNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIE 488
Query: 300 IFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+F+ M E N V++ A++ +D A + F +MT
Sbjct: 489 LFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 529
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 122/265 (46%), Gaps = 20/265 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQV- 114
D+ WN I + RNG L + M + S + ++++ N + +++
Sbjct: 264 DLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIH 323
Query: 115 ---FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
Q ++ + +I Y + + + +F ++ +RD +SWN++++G QNG D
Sbjct: 324 GCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFD 383
Query: 172 AARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACML--FESKANWE--VVSWNSLM 223
+ F +ML + S++ ++ A + L + ++ ++ + +SL+
Sbjct: 384 EGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLV 443
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----F 279
+ K + A+ IFDRM +RD VSW MI G A + + +A LFE+ + +
Sbjct: 444 DMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYV 503
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAM 304
+ A+++ G VDEA F++M
Sbjct: 504 AFMAVLTACSHAGLVDEAWKYFNSM 528
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+ + ++W ++I Y G SL FI M G + + F SVL CA L
Sbjct: 64 LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMD 123
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
L LG+ LHG +++VG + + GNAL+ MY K
Sbjct: 124 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSK 155
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 30/260 (11%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
+++I Y ++ + +VF + +RD +SWN +I+G V+N F M
Sbjct: 339 SSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIK 398
Query: 150 PKRDVVS--------WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
PK S T+ G +GY R FD +N + L+ Y + G I
Sbjct: 399 PKSYSFSSIMPACAHLTTLHLGKQLHGY--ITRNGFD----ENIFIASSLVDMYAKCGNI 452
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGY 257
A +F+ ++VSW +++ G DA +F++M + V++ ++T
Sbjct: 453 RTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTAC 512
Query: 258 AQNNYLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS- 311
+ + EA + F + V + A+ + G+++EA MP T S
Sbjct: 513 SHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSV 572
Query: 312 WNAMIAGYVQTKRMDMAREL 331
W +++ K +DMA ++
Sbjct: 573 WATLLSACRVHKNVDMAEKV 592
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/470 (46%), Positives = 296/470 (62%), Gaps = 4/470 (0%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
++I+ Y + AR++F+ + ++ SWN++I Q+G + ARNLF MP+ + I
Sbjct: 103 TSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVI 162
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGE---RLNRSPFTSVLSTCANLASLELGKQLH 429
SW+ +I GY + G +++L LF EM+ G R N + VL+ C L +LE GK H
Sbjct: 163 SWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAH 222
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFG 488
+ K G +G AL+ MY KCGSVE+A F + +KDV++W+ MI+G A HG
Sbjct: 223 AYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLA 282
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
++ + LF M G++P+ +T + + AC H GLV +G +Y M DY +IP +HY C
Sbjct: 283 EECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGC 342
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDL GRAGR+ EA N++K+MP EPD WGALL R++G E E A + + E+EP N
Sbjct: 343 MVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTN 402
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
+G YVLLSN+YA GRW DV VR M G+KKV G S +EV +H F VGD HPE
Sbjct: 403 SGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPET 462
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
+I+ LEE+ +LK +G+V +TK VL D+ EE KE L HSEKLA+AYG L G P
Sbjct: 463 RQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTP 522
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IR++KNLR+C DCH AIK ISK+ R II+RD NRFHHF+ G CSC DYW
Sbjct: 523 IRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 572
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 46/323 (14%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++IS Y G L ARQVFD++PQ DL SWN +I+ + + ARNLF +MP+R+V+
Sbjct: 103 TSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVI 162
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM-------LEKNEISWNGLLAAYVQNGRIEEA---- 204
SW+ M++GY + G A +F M + NE + +G+LAA + G +E
Sbjct: 163 SWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAH 222
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-PVRDEVSWNTMITGYAQNNYL 263
+ + +VV +L+ + K + A W+F + P +D ++W+ MI+G A +
Sbjct: 223 AYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLA 282
Query: 264 AEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
E LF + + V T+ A+ V G V E + M E ++
Sbjct: 283 EECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSI--------- 333
Query: 320 VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
+ + M+ Y ++G I A N+ MP + D + W A++
Sbjct: 334 -----------------IPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALL 376
Query: 379 AGYAQSG---YSEDSLRLFIEMK 398
+G G E +L+ IE++
Sbjct: 377 SGSRMHGDIETCELALKKLIELE 399
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 40/265 (15%)
Query: 367 PQHDCISWAAIIAGYAQ-----SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
P + W +I + Q +G + + +F+ M+ +G + + F +L + A+ +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD---------- 471
L LG+ +H Q+++ G FV +L+ MY CG++ A F+EI D
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINA 139
Query: 472 ---------------------VISWNTMIAGYARHGFGKDALMLFESMKTVG---IKPDD 507
VISW+ MI GY R G K+AL LF M+ +G ++P++
Sbjct: 140 NFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 199
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
TM G+L+AC G +E G ++ ++ G+ + T ++D+ + G +++A +
Sbjct: 200 FTMSGVLAACGRLGALEHG-KWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFS 258
Query: 568 NMPFEPDAATWGALLGACRLYGKTE 592
N+ D W A++ ++G E
Sbjct: 259 NLGPNKDVMAWSAMISGLAMHGLAE 283
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 38/328 (11%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P+P D+ WN I + + G D A ++F MP R+ +S++ MI+GY+ GQ A
Sbjct: 126 PQP----DLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEAL 181
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM--------------MPKRDVVSWN 158
+F +M + +V + + + L+A L + MP DVV
Sbjct: 182 ALFREMQMLGVN--DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV-DVVLGT 238
Query: 159 TMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV- 216
++ YA+ G + A +F + K+ ++W+ +++ +G EE LF N V
Sbjct: 239 ALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVR 298
Query: 217 --------VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
V + GG V + + + D + + M+ Y + + EA
Sbjct: 299 PNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWN 358
Query: 269 LFEEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPE-KNTVSWNAMIAGYVQTKR-- 324
+ + P++ DV W A++SG +G ++ + + E + T S ++ V KR
Sbjct: 359 VVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGR 418
Query: 325 ---MDMARELFEAMTCKNVASWNTMITG 349
+ R+L E M K V + + G
Sbjct: 419 WEDVRHVRDLMETMGIKKVPGCSLIEVG 446
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/606 (38%), Positives = 343/606 (56%), Gaps = 47/606 (7%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPV 275
+SL+ +++ DA+ + D MP R V W+ +I +A + A +R+ +
Sbjct: 59 SSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVE 118
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSW----------------- 312
+V TW +VSG ++G+ +A + M P+ VS
Sbjct: 119 PNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQL 178
Query: 313 ----------------NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
A+I Y + R D +F+ + +VAS N ++ G +++ ++
Sbjct: 179 HGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQV 238
Query: 357 THARNLF----DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
+ A LF R + + +SW +I+A Q+G +++ LF EM+ G N V
Sbjct: 239 SEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCV 298
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L AN+A+L G+ H ++ GF +VG+AL+ MY KCG V +A FE + ++V
Sbjct: 299 LPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNV 358
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWN MI GYA HG ++A+ LF SM++ KPD +T +L ACS G E+G YF
Sbjct: 359 VSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNE 418
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M +G+ P +HY CMV LLGRAG+LD+A +++ MPFEPD WG+LLG+CR++G
Sbjct: 419 MQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVV 478
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
LAE AAE +F++EPENAG YVLLSN+YA+ W V+++R M+ G+KK G SW+E++
Sbjct: 479 LAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIK 538
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
NKVH GD+ HP I L+ L ++++ GF ST VLHDV E+EK+ +L HSE
Sbjct: 539 NKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSE 598
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLAVA G++S G P++V+KNLR+C DCH A+K IS R I +RD NRFHHF G C
Sbjct: 599 KLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKC 658
Query: 773 SCGDYW 778
SC DYW
Sbjct: 659 SCADYW 664
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 72/358 (20%)
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+D F ++++ Y++ G +AR + D MP + V W+A+IA + + A L E M
Sbjct: 53 RDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERM 112
Query: 336 TCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
NV +WN +++G +SG + D++
Sbjct: 113 RSDGVEPNVITWNGLVSGLNRSGR-------------------------------ARDAV 141
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+ M G + + + LS ++ + +G+QLHG +VK G V AL+ MY
Sbjct: 142 LALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMY 201
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG +E F+E DV S N ++AG +R+ +AL LF GI+ + ++
Sbjct: 202 GKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWT 261
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC----------------------- 548
I++ C G + + F M + G+ PNS C
Sbjct: 262 SIVACCVQNGRDLEAVDLFREMQSE-GIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLR 320
Query: 549 ------------MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+VD+ + GR+ +A+ + + MP+ + +W A++G ++G+ E A
Sbjct: 321 KGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAMIGGYAMHGEAENA 377
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 161/403 (39%), Gaps = 95/403 (23%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
R + ++++ YL G AR V D MP R +V W+ +I+ + + A L E M
Sbjct: 53 RDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERM 112
Query: 150 ----PKRDVVSWNTMLSGYAQNGYADAARRIFDRM------------------------- 180
+ +V++WN ++SG ++G A A RM
Sbjct: 113 RSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDV 172
Query: 181 --------------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
+ L+ Y + GR +E +F+ ++ +V S N+L+ G
Sbjct: 173 AVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGL 232
Query: 227 VKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK------ 276
+ ++ +A +F R + VSW +++ QN EA LF E +
Sbjct: 233 SRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNS 292
Query: 277 ---------------------------------DVFTWTAMVSGYVQNGKVDEARMIFDA 303
D++ +A+V Y + G+V +ARMIF+A
Sbjct: 293 VTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEA 352
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHA 359
MP +N VSWNAMI GY + A LF +M ++ ++ ++ +Q+G
Sbjct: 353 MPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEG 412
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEM 397
R+ F+ M IS +A ++ ++G +D+ + +M
Sbjct: 413 RSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQM 455
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 22/272 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DL 123
I + + G D + VF+ S NA+++G N Q+ A ++F + R ++
Sbjct: 198 IDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNV 257
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDR 179
VSW +++ V+N A +LF M + V+ +L +A R
Sbjct: 258 VSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCF 317
Query: 180 MLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
L K + + L+ Y + GR+ +A M+FE+ VVSWN+++GG+ +A
Sbjct: 318 SLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENA 377
Query: 236 KWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT-----WTAMVS 286
+F M E V++ ++ +Q + E + F E K + + MV+
Sbjct: 378 VRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVT 437
Query: 287 GYVQNGKVDEARMIFDAMP-EKNTVSWNAMIA 317
+ GK+D+A I + MP E + W +++
Sbjct: 438 LLGRAGKLDDAYDIINQMPFEPDGCIWGSLLG 469
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+A H R+ C S F+ S A++ Y G++ AR +F+ MP R++V
Sbjct: 304 NIAALMHGRSAHCFSLRKGFHHDIYVGS----ALVDMYAKCGRVRDARMIFEAMPYRNVV 359
Query: 125 SWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
SWN MI GY + A LF M K D+V++ +L +Q G+ + R F+ M
Sbjct: 360 SWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEM 419
Query: 181 LEKNEISWNGLLAAYVQNGRIEE-ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
K+ IS R+E ACM+ +L+G + +L DA I
Sbjct: 420 QHKHGIS-----------PRMEHYACMV-------------TLLG---RAGKLDDAYDII 452
Query: 240 DRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEAP 274
++MP D W +++ N LAE A+ LF+ P
Sbjct: 453 NQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEP 492
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
G FV ++LL Y + G+ +A + + + V+ W+ +IA +A HG + A L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
E M++ G++P+ IT G++S + +G M+ + G +P++ +C + +G
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGE-GFLPDATGVSCALSAVGD 168
Query: 556 AGRLDEAQNL---MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
G + + L + DA AL+ +YGK A++ V E
Sbjct: 169 VGDVAVGEQLHGYVVKAGCRLDACVATALID---MYGKCGRADEIVRVFDE 216
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/679 (36%), Positives = 383/679 (56%), Gaps = 74/679 (10%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
A ++F+ + + +++ WNTM G+A + +A +++ M+ GLL +
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISL------GLLPDSYTFPFL 95
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
++C + + + + + L GF D ++I+ YAQN
Sbjct: 96 LKSCAKSKIRKEGQQIHGHVLKLGFD-----------------LDIYVHTSLISMYAQNG 138
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
L +A+++F+ + +DV ++TA+++GYV G ++ A+ +FD +P K+ VSWNAMI+GYV+
Sbjct: 139 RLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVE 198
Query: 322 TKRMDMARELFEAM------------------TC---------KNVASW----------- 343
T A ELF+ M C ++V SW
Sbjct: 199 TGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLK 258
Query: 344 --NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N +I Y++ GE+ A LFD + D ISW +I GY +++L LF EM R G
Sbjct: 259 IVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 318
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN------ALLVMYCKCG 455
E N S+L CA+L ++++G+ +H V + + V N +L+ MY KCG
Sbjct: 319 ETPNDVTMLSILPACAHLGAIDIGRWIH---VYINKKLKGVVTNVSSLQTSLIDMYAKCG 375
Query: 456 SVEEAYHAFEE-IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
++ A F+ + ++ + +WN MI+G+A HG A +F M+ GI+PDDIT VG+L
Sbjct: 376 DIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLL 435
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
SACSH+G+++ G F SM R Y + P +HY CM+DLLG +G EA+ ++ MP EPD
Sbjct: 436 SACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPD 495
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
W +LL AC+++G EL E A+ + ++EP N+G YVLLSN+YAA+GRW +V+K+R
Sbjct: 496 GVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRAL 555
Query: 635 MRDRGV-KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
+ D+G+ KKV G S +E+ + VH F +GD LHP+ IY LEE+E L++ GFV T
Sbjct: 556 LNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSE 615
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
VL ++ EE +E LR+HSEKLA+A+G++S G + +MKNLRVC++CH A K ISKI
Sbjct: 616 VLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYK 675
Query: 754 RLIILRDNNRFHHFSGGSC 772
R II RD RF HF G C
Sbjct: 676 REIIARDRTRFXHFRDGVC 694
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 196/412 (47%), Gaps = 41/412 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D DI I+ + +NG + A VF+ R VSY A+I+GY+ G ++ A+++FD+
Sbjct: 121 DLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDE 180
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLF-EMM----PKRDVVSWNTMLSGYAQNGYADA 172
+P +D+VSWN MISGYV + A LF EMM + D + T++S AQ+ +
Sbjct: 181 IPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIEL 240
Query: 173 ARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
R + D N N L+ Y + G +E AC LF+ N +V+SWN+L+GG+
Sbjct: 241 GRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTH 300
Query: 229 QKRLGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFT-- 280
+A +F M E + TM++ +L ++ +K V T
Sbjct: 301 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNV 360
Query: 281 ---WTAMVSGYVQNGKVDEARMIFD-AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
T+++ Y + G +D A+ +FD +M ++ +WNAMI+G+ R + A ++F M
Sbjct: 361 SSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMR 420
Query: 337 CKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYS 387
+ ++ +++ + SG + RN+F M + I+ + +I SG
Sbjct: 421 MNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSG-- 478
Query: 388 EDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C +LELG+ +L+K+
Sbjct: 479 -----LFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKI 525
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 46/309 (14%)
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
+A ++FD + + + + W + G+A S +L+L++ M G + F +L +CA
Sbjct: 41 YAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCA 100
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA--------------YHA 463
+ G+Q+HG ++K+GF+ +V +L+ MY + G +E+A Y A
Sbjct: 101 KSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTA 160
Query: 464 -----------------FEEIVDKDVISWNTMIAGYARHGFGKDALMLF-ESMKTVGIKP 505
F+EI KDV+SWN MI+GY G K+AL LF E M ++P
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRP 220
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D+ TMV ++SAC+ + +E G + +S D+G N K ++DL + G ++ A L
Sbjct: 221 DESTMVTVVSACAQSDSIELG-RHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACEL 279
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM--EPENAGMYVLLSNLYAAS- 622
+ + D +W L+G Y L ++A + EM E +LS L A +
Sbjct: 280 FDGL-WNKDVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 335
Query: 623 ------GRW 625
GRW
Sbjct: 336 LGAIDIGRW 344
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/534 (41%), Positives = 325/534 (60%), Gaps = 38/534 (7%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
+F +++ YV+ +++A +FD MP++N +SW MI+ Y + K A EL M
Sbjct: 48 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 107
Query: 336 --TCKNVASWNT--------------------------------MITGYAQSGEITHARN 361
NV ++++ +I +A+ GE A +
Sbjct: 108 DGVRPNVYTYSSVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALS 167
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+FD M D I W +II G+AQ+ S+ +L LF MKR G ++ TSVL C LA
Sbjct: 168 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 227
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
LELG Q H +VK ++ + NAL+ MYCKCGS+E+A F ++ ++DVI+W+TMI+G
Sbjct: 228 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISG 285
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
A++G+ ++AL LFE MK+ G KP+ IT+VG+L ACSH GL+E G YF SM + YG+ P
Sbjct: 286 LAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINP 345
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+HY CM+DLLG+AG+LD+A L+ M EPDA TW LLGACR+ LAE AA+ +
Sbjct: 346 GREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 405
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
++PE+AG Y +LSN+YA S +W V ++R +MRD G+KK G SW+EV ++H F +G
Sbjct: 406 IALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIG 465
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D HP+ + L +L +L G+V T VL D+ E+ E LR+HSEKLA+A+G++
Sbjct: 466 DESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 525
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
++P+ + IR+ KNLR+C DCH K SK+ R I++RD R+HHF G CSCG
Sbjct: 526 TLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 46/258 (17%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
N +I+ Y+ L+ A Q+FDQMPQR+++SW MIS Y + K A L +M +
Sbjct: 52 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111
Query: 152 RDVVSWNTMLSGYAQNGYADAARR---IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
+V +++++L A NG +D I LE + + L+ + + G E+A +F
Sbjct: 112 PNVYTYSSVLR--ACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVF 169
Query: 209 ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV------------------------ 244
+ + + WNS++GGF + R A +F RM
Sbjct: 170 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 229
Query: 245 -------------RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
+D + N ++ Y + L +A+R+F + +DV TW+ M+SG QN
Sbjct: 230 LGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQN 289
Query: 292 GKVDEARMIFDAMPEKNT 309
G EA +F+ M T
Sbjct: 290 GYSQEALKLFELMKSSGT 307
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL--LNG----QLDPARQVFDQ 117
WN I +N D AL +F M R ++ A ++ L G +L V
Sbjct: 180 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 239
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
+DL+ N ++ Y + SL AR +F M +RDV++W+TM+SG AQNGY+ A ++F
Sbjct: 240 KYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF 299
Query: 178 DRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVK 228
+ M + N I+ G+L A G +E+ F S ++ + ++ K
Sbjct: 300 ELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGK 359
Query: 229 QKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFEEAPVKDVFTWTA 283
+L DA + + M D V+W T++ +N LAE A+++ P +D T+T
Sbjct: 360 AGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP-EDAGTYTV 418
Query: 284 MVSGYVQNGKVDEARMI 300
+ + Y + K D I
Sbjct: 419 LSNIYANSQKWDSVEEI 435
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 121/274 (44%), Gaps = 31/274 (11%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
++ +G + + ++ ++ C + ++ G + L G + F+ N L+ MY K
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+ +A+ F+++ ++VISW TMI+ Y++ + AL L M G++P+ T +L A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 517 CS--------HTGLVEKGTE-----------YFYSMNR--------DYGVIPNSKHYTCM 549
C+ H G++++G E F + D V ++ + +
Sbjct: 124 CNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 183
Query: 550 VDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
+ + R D A L K M F + AT ++L AC EL +A I + +
Sbjct: 184 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD- 242
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
++ + L ++Y G D +V +M++R V
Sbjct: 243 QDLILNNALVDMYCKCGSLEDARRVFNQMKERDV 276
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + G + A VFN M R ++++ MISG NG A ++F+
Sbjct: 242 DQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFEL 301
Query: 118 MPQRDLVSWNVMISGYVRNKS-----------LSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
M + I G + S + + L+ + P R+ + M+ +
Sbjct: 302 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGRE--HYGCMIDLLGK 359
Query: 167 NGYADAARRIFDRM-LEKNEISWNGLLAA 194
G D A ++ + M E + ++W LL A
Sbjct: 360 AGKLDDAVKLLNEMECEPDAVTWRTLLGA 388
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/497 (42%), Positives = 315/497 (63%), Gaps = 2/497 (0%)
Query: 191 LLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
++ Y +NG + +A LF W V N+++ G+ K ++ +A+ +FD MP +D VS
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 60
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
WN+M+TGY +N + + FEE +DV +W MV G+V+ G ++ + F+ +P NT
Sbjct: 61 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 120
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
VSW M+ G+ + ++ AR LF+ M +NV +WN MI Y Q+ + A +LF MP+
Sbjct: 121 VSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK 180
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ ISW +I GY + G +++ +L +M Y + ++S F LS+CA+LA+L++GKQLH
Sbjct: 181 NSISWTTVINGYVRMGKLDEARQLLNQMP-YRNKPDQSTFACGLSSCAHLAALQVGKQLH 239
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
++K G+ FV NAL+ MY KCGS+ A F++I DV+SWN++IA YA +G G+
Sbjct: 240 QLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGR 299
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+AL LF M+ G+ PD++T VGILSACSH GL+++G + F M + Y + P ++HY CM
Sbjct: 300 EALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACM 359
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
VDLLGRAGRL+EA L++ M +A WGALLGACR++G ELA+ AAE + E EP
Sbjct: 360 VDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKT 419
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
YVLLSN+ A +GRW +V++VR M+++G +K G+SW+E+QN+VH F D HP
Sbjct: 420 SNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAV 479
Query: 670 RIYAYLEELEFKLKQDG 686
+ L L ++ G
Sbjct: 480 ELCHILRSLTAHMRNTG 496
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 229/419 (54%), Gaps = 16/419 (3%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
MI+ Y NG+L AR +F+ +P + + V N M++GY +N+ AR LF+ MP +D+VS
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 60
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
WN+ML+GY +NG + F+ M E++ +SWN ++ +V+ G + + FE N
Sbjct: 61 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 120
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
VSW +++ GF + ++ +A+ +FD+MP+R+ V+WN MI Y QN ++ EA LF E P K
Sbjct: 121 VSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK 180
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY---VQTKRMDMARELFE 333
+ +WT +++GYV+ GK+DEAR + + MP +N + G + + ++L +
Sbjct: 181 NSISWTTVINGYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQ 240
Query: 334 AMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
+ A+ N +IT YA+ G I+ A LF + D +SW ++IA YA +G +
Sbjct: 241 LVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGRE 300
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALL 448
+L+LF +M+ G + F +LS C+++ ++ G +L +V+ E ++
Sbjct: 301 ALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMV 360
Query: 449 VMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG------FGKDALMLFESMKT 500
+ + G +EEA+ + ++ + W ++ HG F + L+ FE KT
Sbjct: 361 DLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKT 419
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 202/384 (52%), Gaps = 19/384 (4%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
W+ N + + +N D A +F++MP + VS+N+M++GY NG++ Q F++M
Sbjct: 25 WNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEM 84
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
+RD+VSWN+M+ G+V L+++ FE +P + VSW TML G+A+ G ARR+FD
Sbjct: 85 AERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFD 144
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+M +N ++WN ++AAYVQN ++EA LF +SW +++ G+V+ +L +A+ +
Sbjct: 145 QMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQL 204
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEA-------QRLFEEAPVKDVFTWTAMVSGYVQN 291
++MP R++ +T G + +LA Q + + D+F A+++ Y +
Sbjct: 205 LNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKC 264
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMI 347
G + A ++F + + VSWN++IA Y A +LF M + VA ++ ++
Sbjct: 265 GSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGIL 324
Query: 348 TGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
+ + G I LF M Q I +A ++ ++G E++ +L MK
Sbjct: 325 SACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINA- 383
Query: 403 RLNRSPFTSVLSTCANLASLELGK 426
N + ++L C +LEL K
Sbjct: 384 --NAGIWGALLGACRIHGNLELAK 405
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/553 (41%), Positives = 328/553 (59%), Gaps = 13/553 (2%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA---PVK-DVFTWTAMVSG-YVQNG 292
+F R P + W +I +A + A + + P++ + FT ++++ +
Sbjct: 77 LFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPA 136
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+ + I + VS ++ Y + + A++LF+AM +++ S+ M+T YA+
Sbjct: 137 RAVHSHAIKFGLSSHLYVS-TGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAK 195
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-------RLN 405
G + AR LF+ M D + W +I GYAQ G ++L F +M R N
Sbjct: 196 HGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPN 255
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+VLS+C + +LE GK +H + G + VG AL+ MYCKCGS+E+A F+
Sbjct: 256 EITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFD 315
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ KDV++WN+MI GY HGF +AL LF M +G+KP DIT V +L+AC+H GLV K
Sbjct: 316 VMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSK 375
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E F SM YG+ P +HY CMV+LLGRAGR+ EA +L+++M EPD WG LL AC
Sbjct: 376 GWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWAC 435
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R++ L E+ AE++ ++G YVLLSN+YAA+ W V+KVR M+ GV+K G
Sbjct: 436 RIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPG 495
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
S +EV+N+VH F GD HP IY+ LE++ LK+ + T VLHD+GE+EKE
Sbjct: 496 CSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQ 555
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L HSEKLA+A+G++S G I+++KNLRVC DCH +K +SKI GR II+RD NRFH
Sbjct: 556 SLEVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFH 615
Query: 766 HFSGGSCSCGDYW 778
HF GSCSC DYW
Sbjct: 616 HFENGSCSCRDYW 628
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 25/277 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ Y G + A+++FD MP+R LVS+ M++ Y ++ L AR LFE M +DVV
Sbjct: 156 TGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVV 215
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM-----------LEKNEISWNGLLAAYVQNGRIEEA 204
WN M+ GYAQ+G + A F +M + NEI+ +L++ Q G +E
Sbjct: 216 CWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG 275
Query: 205 CMLFESKAN----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ N V +L+ + K L DA+ +FD M +D V+WN+MI GY +
Sbjct: 276 KWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIH 335
Query: 261 NYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVS 311
+ EA +LF E V T+ A+++ G V + +FD+M E
Sbjct: 336 GFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEH 395
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
+ M+ + RM A +L +M + + W T++
Sbjct: 396 YGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLL 432
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 47/293 (16%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA G + H+ LF R P + W II +A +L + +M + + N
Sbjct: 65 YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG------------------------- 444
+S+L C +L + +H +K G + +V
Sbjct: 125 SSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180
Query: 445 ------NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
A+L Y K G + EA FE + KDV+ WN MI GYA+HG +AL+ F M
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240
Query: 499 KTVG-------IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
+ ++P++IT+V +LS+C G +E G ++ +S + G+ N + T +VD
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG-KWVHSYVENNGIKVNVRVGTALVD 299
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+ + G L++A+ + M + D W +++ YG +++A ++ EM
Sbjct: 300 MYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMG---YGIHGFSDEALQLFHEM 348
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 167/402 (41%), Gaps = 66/402 (16%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G L + +F + P ++ W +I+ + A + + M + LS
Sbjct: 69 GHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLL 128
Query: 166 QNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
+ AR + L + GL+ AY + G + A LF++ +VS+ +
Sbjct: 129 KACTLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTA 188
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV------ 275
++ + K L +A+ +F+ M ++D V WN MI GYAQ+ EA F + +
Sbjct: 189 MLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNG 248
Query: 276 -----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMIAGYVQTKRM 325
+ T A++S Q G ++ + + + E N + N A++ Y + +
Sbjct: 249 NGKVRPNEITVVAVLSSCGQVGALECGKWVHSYV-ENNGIKVNVRVGTALVDMYCKCGSL 307
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ AR++F+ M K+V +WN+MI GY G
Sbjct: 308 EDARKVFDVMEGKDVVAWNSMIMGYGIHG------------------------------- 336
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-------KQLHGQLVKVGFE 438
+S+++L+LF EM G + + F +VL+ CA+ + G K +G KV
Sbjct: 337 FSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVE-H 395
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMI 479
GC V + + G ++EAY + V+ D + W T++
Sbjct: 396 YGCMVN-----LLGRAGRMQEAYDLVRSMEVEPDPVLWGTLL 432
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 31/308 (10%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ + R G SA +F++MP RS VSY AM++ Y +G L AR +F+ M +D+V WN
Sbjct: 159 VDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWN 218
Query: 128 VMISGYVRNKSLSAARNLFEMMP-----------KRDVVSWNTMLSGYAQNGYADAARRI 176
VMI GY ++ + A F M + + ++ +LS Q G + + +
Sbjct: 219 VMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWV 278
Query: 177 FDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
+E N I N L+ Y + G +E+A +F+ +VV+WNS++ G+
Sbjct: 279 HS-YVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGF 337
Query: 232 LGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD-------VFT 280
+A +F M ++++ ++T A +++ +F+ +KD V
Sbjct: 338 SDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDS--MKDGYGMEPKVEH 395
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+ MV+ + G++ EA + +M E + V W ++ + + E+ E +
Sbjct: 396 YGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNG 455
Query: 340 VASWNTMI 347
+AS T +
Sbjct: 456 LASSGTYV 463
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP-----------RRSSVSYNAMISGYLLNGQL 108
D+ WNV I + ++GC + AL F M R + ++ A++S G L
Sbjct: 213 DVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGAL 272
Query: 109 DPARQVFDQMPQRDLVSWNV-----MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
+ + V + + + + NV ++ Y + SL AR +F++M +DVV+WN+M+ G
Sbjct: 273 ECGKWVHSYV-ENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMG 331
Query: 164 YAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW----- 214
Y +G++D A ++F M ++ ++I++ +L A G + + +F+S +
Sbjct: 332 YGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEP 391
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMI 254
+V + ++ + R+ +A + M V D V W T++
Sbjct: 392 KVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLL 432
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 10/177 (5%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H L++ G + L Y G + + F + +V W +I +A
Sbjct: 41 QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFD 100
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
AL + M T I+P+ T+ +L AC+ +S +G+ +
Sbjct: 101 LFHHALSYYSQMLTHPIQPNAFTLSSLLKACT-----LHPARAVHSHAIKFGLSSHLYVS 155
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
T +VD R G + AQ L MP E ++ A+L Y K + + A V+FE
Sbjct: 156 TGLVDAYARGGDVASAQKLFDAMP-ERSLVSYTAMLTC---YAKHGMLPE-ARVLFE 207
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 338/572 (59%), Gaps = 44/572 (7%)
Query: 250 WNTMITGYAQNNYLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
++++I AQ LA A+ L D F +++ Y + G V +AR +FD MP
Sbjct: 63 YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMP 122
Query: 306 EKNTVSWNAMIAGYVQTKRM--------DMARELF------------------------- 332
++ VSW +IAGY Q DM R F
Sbjct: 123 SRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQ 182
Query: 333 -EAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
A+ K +V + ++ YA+ ++ A +FDR+ + +SW A+IAG+A+
Sbjct: 183 MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKAD 242
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E +L F EM+R G ++S+ S A + +LE G+ +H L+K G + FVGN
Sbjct: 243 GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNT 302
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+L MY K GS+ +A F+ + +D+++WNTM+ A++G GK+A+ FE ++ GI+ +
Sbjct: 303 MLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 362
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT + +L+ACSH GLV++G YF M +DY V P HY VDLLGRAG L EA +
Sbjct: 363 QITFLSVLTACSHGGLVKEGKHYF-DMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFV 421
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
MP EP AA WGALLGACR++ ++ + AA+ +FE++P++ G VLL N+YA++G+W
Sbjct: 422 FKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWN 481
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
D ++VR M+ GVKK SW++++N VH F D HP+ IY EE+ ++K+ G
Sbjct: 482 DAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAG 541
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V +T VL + E+E+E L+YHSEK+A+A+ ++++PAG IR+MKN+R+C DCH+A K
Sbjct: 542 YVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFK 601
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++SK+ R I++RD NRFHHFS GSCSCGDYW
Sbjct: 602 YVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 121/296 (40%), Gaps = 82/296 (27%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMPKR-- 152
N++I Y G + AR VFD+MP RD+VSW +I+GY +N + A L +M+ R
Sbjct: 99 NSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFR 158
Query: 153 ------------------------------------DVVSWNTMLSGYAQNGYADAARRI 176
DV + +L YA+ D A +
Sbjct: 159 PNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMV 218
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-------------------------- 210
FDR++ KNE+SWN L+A + + E M F
Sbjct: 219 FDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGAL 278
Query: 211 -----------KANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
K+ ++ ++ N+++G + K + DA+ +FDRM RD V+WNTM+T
Sbjct: 279 EQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTAL 338
Query: 258 AQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
AQ EA FEE + T+ ++++ G V E + FD M + N
Sbjct: 339 AQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNV 394
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + + + R D A+ VF+ + ++ VS+NA+I+G+ + F +
Sbjct: 193 DEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAE 252
Query: 118 MPQRDL----VSWNVMISGYVRNKSLSAAR----NLFEMMPKRDVVSWNTMLSGYAQNGY 169
M + +++ M S + R +L R +L + K NTML YA++G
Sbjct: 253 MQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGS 312
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
AR++FDRM +++ ++WN +L A Q G +EA FE
Sbjct: 313 MVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFE 352
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/545 (40%), Positives = 322/545 (59%), Gaps = 31/545 (5%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGK 293
+FD M RD VSWNT++ G A+ EA +++ E D FT + ++ + +
Sbjct: 126 VFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECAD 185
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
V + G+ D +V +++I YA
Sbjct: 186 VKRGLEVH----------------GFAFRNGFD-----------SDVFVGSSLIDMYANC 218
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
++ +FD +P D I W +++AG AQ+G E++L +F M + G R F+S++
Sbjct: 219 TRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLI 278
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
C NLASL GKQLH ++ GFE F+ ++L+ MYCKCG + A+ F+++ DV+
Sbjct: 279 PVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVV 338
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SW MI GYA HG ++AL+LFE M+ KP+ IT + +L+ACSH GLV+KG +YF SM
Sbjct: 339 SWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSM 398
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+ YG++P +H+ + D LGRAG LDEA N + M +P A+ W LL ACR++ T L
Sbjct: 399 SNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTML 458
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
AE+ A+ I E+EP + G +V+LSN+Y+ASGRW + + +R MR +G+KK SW+EV++
Sbjct: 459 AEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKS 518
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
K+H F D HP DRI L ++ ++G V +T+ V D+ EE K ++L HSEK
Sbjct: 519 KLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEK 578
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+ +GI+S PAG IRVMKNLRVC DCH K ISK+ R I++RD NRFHHF G+CS
Sbjct: 579 LAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCS 638
Query: 774 CGDYW 778
CGD+W
Sbjct: 639 CGDFW 643
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 174/399 (43%), Gaps = 35/399 (8%)
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA----RRIFDRMLEKNEISWNGL 191
+ + + R +F+ M +RDVVSWNT++ G A+ G A R++ + + + +
Sbjct: 117 STAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTV 176
Query: 192 LAAYVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
L + + ++ + F + + +V +SL+ + R + +FD +PVRD
Sbjct: 177 LPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDH 236
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEA------PVKDVFTWTAMVSGYVQN---GKVDEAR 298
+ WN+++ G AQN + EA +F PV F+ V G + + GK A
Sbjct: 237 ILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAY 296
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITH 358
+I E N +++I Y + + +A +F+ M+ +V SW MI GYA G
Sbjct: 297 VICGGF-EDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPARE 355
Query: 359 ARNLFDRM------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTS 411
A LF+RM P H I++ A++ + +G + + F M YG F +
Sbjct: 356 ALVLFERMELGNAKPNH--ITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAA 413
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS----VEEAYHAFEEI 467
+ T L+ + + + K+ + V + LL C+ EE E+
Sbjct: 414 LADTLGRAGELD---EAYNFISKMQIKPTASVWSTLL-RACRVHKNTMLAEEVAKKIMEL 469
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+ + S + Y+ G +A L ESM+ G+K D
Sbjct: 470 EPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKD 508
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 29/245 (11%)
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP--FTSVLSTCANLASLELGKQLHGQ 431
WA I A G+ D++ LF+ M+ + P + L +CA L LG LH
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 432 LVKVGFEAGCFVGNALLVMYCK--CG-----------------SVEEAYHAFEEIVDKDV 472
++ G A F NALL +YCK C + E F+E++++DV
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE---Y 529
+SWNT++ G A G +AL M G +PD T+ +L + V++G E +
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+ D V S ++D+ R D + + N+P D W +LL C G
Sbjct: 196 AFRNGFDSDVFVGSS----LIDMYANCTRTDYSVKVFDNLPVR-DHILWNSLLAGCAQNG 250
Query: 590 KTELA 594
E A
Sbjct: 251 SVEEA 255
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 58/316 (18%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMI------------SGYVRNKSLSAAR----NLFEMMP- 150
+ R+VFD+M +RD+VSWN ++ G+VR R L ++P
Sbjct: 120 FESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPI 179
Query: 151 -------KR---------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
KR DV ++++ YA D + ++FD + ++ I W
Sbjct: 180 FAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILW 239
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMG--GFVKQKRLGD---AKWIF 239
N LLA QNG +EEA +F V V+++SL+ G + R G A I
Sbjct: 240 NSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIC 299
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+S +++I Y + ++ A +F++ DV +WTAM+ GY +G EA +
Sbjct: 300 GGFEDNVFIS-SSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALV 358
Query: 300 IFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGY 350
+F+ M + N +++ A++ +D + F++M+ + + +
Sbjct: 359 LFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTL 418
Query: 351 AQSGEITHARNLFDRM 366
++GE+ A N +M
Sbjct: 419 GRAGELDEAYNFISKM 434
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 30/258 (11%)
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
R FD D+ + +I Y + +F+ +P RD + WN++L+G AQNG +
Sbjct: 198 RNGFDS----DVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVE 253
Query: 172 AARRIFDRMLEKN----EISWNGLLA-----AYVQNGRIEEA---CMLFESKANWEVVSW 219
A IF RML+ ++++ L+ A ++ G+ A C FE V
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDN----VFIS 309
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV- 278
+SL+ + K + A IFD+M D VSW MI GYA + EA LFE + +
Sbjct: 310 SSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAK 369
Query: 279 ---FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARE 330
T+ A+++ G VD+ F +M + + A+ + +D A
Sbjct: 370 PNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYN 429
Query: 331 LFEAMTCKNVAS-WNTMI 347
M K AS W+T++
Sbjct: 430 FISKMQIKPTASVWSTLL 447
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMIS-----GYLLNGQLDPARQV 114
WN + +NG + AL +F M R V+++++I L G+ A +
Sbjct: 239 WNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVI 298
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+S + +I Y + +S A +F+ M DVVSW M+ GYA +G A A
Sbjct: 299 CGGFEDNVFIS-SSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL 357
Query: 175 RIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN-WEVVS----WNSLMGG 225
+F+RM + N I++ +L A G +++ F+S +N + +V + +L
Sbjct: 358 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADT 417
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEAPVKDVFT 280
+ L +A +M ++ S W+T++ +N LAE A+++ E P + + +
Sbjct: 418 LGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEP-RSIGS 476
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEK 307
+ + Y +G+ +EA + ++M +K
Sbjct: 477 HVVLSNMYSASGRWNEAAHLRESMRKK 503
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 136/293 (46%), Gaps = 23/293 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
+++I Y + D + +VFD +P RD + WN +++G +N S+ A +F M + V
Sbjct: 209 SSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVR 268
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACML 207
V++++++ +++ ++ E N + L+ Y + G I A +
Sbjct: 269 PVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCI 328
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYL 263
F+ ++ +VVSW +++ G+ +A +F+RM + + +++ ++T + +
Sbjct: 329 FDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLV 388
Query: 264 AEAQRLFEEAP-----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMI- 316
+ + F+ V + + A+ + G++DEA M K T S W+ ++
Sbjct: 389 DKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLR 448
Query: 317 AGYVQTKRM---DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
A V M ++A+++ E + +++ S + Y+ SG A +L + M
Sbjct: 449 ACRVHKNTMLAEEVAKKIME-LEPRSIGSHVVLSNMYSASGRWNEAAHLRESM 500
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 359/650 (55%), Gaps = 35/650 (5%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---- 208
DVV N ++S YA+ G AR +FD M +N +S N L++ Y +GR +E+ L
Sbjct: 44 DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVVD 103
Query: 209 ------------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+ AN G+ + + +++F N ++
Sbjct: 104 FGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVF-----------NAVLYM 152
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM---PEK-NTVSW 312
Y Q ++ +A ++FE D F + +M++GY+ G++D + I M EK + VS+
Sbjct: 153 YCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSY 212
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQ 368
A++ K + ++ K NV + ++ Y + + A F+ +P+
Sbjct: 213 VAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPE 272
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ +SW A++ Y Q+ ED+L+LF++M+ G + N + L++CA LA+L G L
Sbjct: 273 KNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNAL 332
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
++K G V NAL+ MY K GS+E+A+ F + +DV+SWN +I GYA HG
Sbjct: 333 GACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLA 392
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
++ + F SM + + P +T VG+LSAC+ GLV++ Y +M ++ G+ P +HYTC
Sbjct: 393 REGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTC 452
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MV LL R GRLDEA+ + N D W +LL +C++Y L + AE I ++EP +
Sbjct: 453 MVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSD 512
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G YVLLSN+YA + RW V KVR MR+R V+K G SW+ V + VH F+ + +HP+
Sbjct: 513 VGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQM 572
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
D+I LEEL ++K G+V + +VLHD+ +E KE L YHSEKLA+A+G++ P G
Sbjct: 573 DQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGAT 632
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I +MKNLR+C+DCH AIK IS + R I++RD RFH GG CSC DYW
Sbjct: 633 IHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 124/517 (23%), Positives = 221/517 (42%), Gaps = 93/517 (17%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
A +D+ N I+ + + G A VF++MP R++VS N ++SGY +G+ + Q+
Sbjct: 40 AAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLL 99
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ + ++ YV + ++SA N+ R + + +G+A+ Y
Sbjct: 100 RVV--------DFGMNEYVLSAAVSATANVRSYDMGRQCHGY-AVKAGFAEQRYV----- 145
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+N +L Y Q +E+A +FES + ++ ++NS++ G++ + +L +
Sbjct: 146 ------------FNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGS 193
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSG 287
I M D VS+ ++ A ++ +A K +V+ +A+V
Sbjct: 194 LGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDM 253
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------ 335
Y + V +A F+ +PEKN VSW A++ Y Q + + A +LF M
Sbjct: 254 YGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTY 313
Query: 336 -----TCKNVASWNT--------MITG--------------YAQSGEITHARNLFDRMPQ 368
+C +A+ T M TG Y++SG I A +F MP
Sbjct: 314 AVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPL 373
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL-ELGKQ 427
D +SW II GYA G + + + F M + F VLS CA L + E
Sbjct: 374 RDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYY 433
Query: 428 LHGQLVKVGFEAG-----CFVGNALLVMYCKCGSVEEAYH-AFEEIVDKDVISWNTMIAG 481
L+ + +VG G C VG + C+ G ++EA + DV++W +++
Sbjct: 434 LNTMMKEVGITPGKEHYTCMVG-----LLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNS 488
Query: 482 ---YARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
Y +G G + + + ++P D+ +LS
Sbjct: 489 CQVYKNYGLGHRV-----AEQILQLEPSDVGTYVLLS 520
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 66/301 (21%)
Query: 75 GCCD---SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR---------- 121
G CD A F +P ++ VS+ A+++ Y N + A Q+F M
Sbjct: 255 GKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYA 314
Query: 122 -----------------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
L+ N +++ Y ++ S+ A +F MP R
Sbjct: 315 VALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLR 374
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA---- 204
DVVSWN +++GYA +G A F ML + +++ G+L+A Q G ++EA
Sbjct: 375 DVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYL 434
Query: 205 -CMLFESKANWEVVSWNSLMGGFVKQKRLGDA-KWIFDRMPVRDEVSWNTMITG------ 256
M+ E + ++G + RL +A ++I + D V+W +++
Sbjct: 435 NTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKN 494
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT-----VS 311
Y + +AE ++ + P DV T+ + + Y + + D + M E+ VS
Sbjct: 495 YGLGHRVAE--QILQLEP-SDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVS 551
Query: 312 W 312
W
Sbjct: 552 W 552
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/741 (33%), Positives = 395/741 (53%), Gaps = 59/741 (7%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN-------------------- 136
A+I+ Y +D A QVFD+ P ++ WN ++ +R+
Sbjct: 171 ALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKA 230
Query: 137 ------KSLSAARNLFEMMPKRDVVSW-------------NTMLSGYAQNGYADAARRIF 177
K L A L + + + + N+++S Y++N + AR +F
Sbjct: 231 TDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVF 290
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKR-- 231
D + N SWN ++++Y NG + A LF S ++++WNSL+ G + Q
Sbjct: 291 DSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYE 350
Query: 232 --LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMV 285
L + + + D S + + + Y + + DV+ T++V
Sbjct: 351 NVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLV 410
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----A 341
Y++N +++A ++F KN +WN++I+GY D A +L M + +
Sbjct: 411 DMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLV 470
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQ----HDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+WN++++GY+ SG A + +R+ + +SW A+I+G Q+ D+L+ F +M
Sbjct: 471 TWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQM 530
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+ + N + +++L CA + L+ G+++H +K GF ++ AL+ MY K G +
Sbjct: 531 QEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKL 590
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+ A+ F I +K + WN M+ GYA +G G++ LF++M GI+PD IT +LS C
Sbjct: 591 KVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGC 650
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
++GLV G +YF SM DY + P +HY+CMVDLLG+AG LDEA + + MP + DA+
Sbjct: 651 KNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASI 710
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
WGA+L ACRL+ ++AE AA +F +EP N+ YVL+ N+Y+ RWGDV +++ M
Sbjct: 711 WGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTA 770
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD 697
GVK +SW++V+ +H FS HPE+ IY L +L ++K+ G+V T V +
Sbjct: 771 MGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQN 830
Query: 698 VGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
+ + EKE +L H+EKLA+ YG++ I G PIRV+KN R+C+DCH A K+IS R I
Sbjct: 831 IDDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIF 890
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
LRD RFHHF G CSC D W
Sbjct: 891 LRDGGRFHHFMNGECSCNDRW 911
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 242/533 (45%), Gaps = 38/533 (7%)
Query: 86 SMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM---PQR-DLVSWN-VMISGYVRNKSLS 140
S P+ SS ++ L+ R++ QM P++ +LV+ + M+ Y+
Sbjct: 22 SSPQFSSPKFSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFE 81
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNG-----YADAARRIFDRMLEKNEISWNGLLAAY 195
+A +F + R+ + WN+ L +A G + + + D+ ++ + + +L
Sbjct: 82 SATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKIC 141
Query: 196 VQN-----GRIEEACML---FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+ G AC+L F+ + +L+ + K + A +FD P++++
Sbjct: 142 LALMELWLGMEVHACLLKRGFQVDVHLSC----ALINLYEKCLGIDRANQVFDETPLQED 197
Query: 248 VSWNTMITGYAQNNYLAEA---QRLFEEAPVKDV-FTWTAMVSGYVQNGKVDEARMIFDA 303
WNT++ ++ +A R + A K T ++ + ++E + I
Sbjct: 198 FLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGY 257
Query: 304 MPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+ NT N++++ Y + R+++AR +F++ N+ASWN++I+ YA +G + A
Sbjct: 258 VIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGA 317
Query: 360 RNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+LF M + D I+W ++++G+ G E+ L ++ G + + TS L
Sbjct: 318 WDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQA 377
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
L LGK++HG +++ E +V +L+ MY K +E+A F +K++ +W
Sbjct: 378 VIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAW 437
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N++I+GY G +A L MK GIK D +T ++S S +G E+ + +
Sbjct: 438 NSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRI-K 496
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE---PDAATWGALLGAC 585
G+ PN +T M+ + +A M E P++ T LL AC
Sbjct: 497 SLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRAC 549
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 168/382 (43%), Gaps = 59/382 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
N+++S Y N +L+ AR VFD +L SWN +IS Y N L+ A +LF M K
Sbjct: 271 NSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIK 330
Query: 152 RDVVSWNTMLSGYAQNGYADAA----RRIFDRMLEKNEISWNGLLAAYVQNGRI----EE 203
D+++WN++LSG+ G + R + + + S L A ++ G E
Sbjct: 331 PDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEI 390
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ SK ++V SL+ ++K L A+ +F ++ +WN++I+GY
Sbjct: 391 HGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLF 450
Query: 264 AEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAM 315
A++L EE D+ TW ++VSGY +G +EA + + + N VSW AM
Sbjct: 451 DNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAM 510
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITG-------------------------- 349
I+G Q + A + F M +NV +T I+
Sbjct: 511 ISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGF 570
Query: 350 -------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
Y++ G++ A +F + + W ++ GYA G+ E+ LF
Sbjct: 571 VDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDN 630
Query: 397 MKRYGERLNRSPFTSVLSTCAN 418
M + G R + FT++LS C N
Sbjct: 631 MCKTGIRPDAITFTALLSGCKN 652
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 204/485 (42%), Gaps = 74/485 (15%)
Query: 1 MRGNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
++ +LR L+ +H + R+ + + N S + L +R D +
Sbjct: 239 LQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRL-ELARAVFDSTEDHN 297
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMISGYLLNG---------- 106
+ WN I+++ NGC + A +F M S +++N+++SG+LL G
Sbjct: 298 LASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIR 357
Query: 107 ------------QLDPARQVFDQMP-----------------QRDLVSWNVMISGYVRNK 137
+ A Q ++ + D+ ++ Y++N
Sbjct: 358 SLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKND 417
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLA 193
L A +F +++ +WN+++SGY G D A ++ +M E+ + ++WN L++
Sbjct: 418 CLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVS 477
Query: 194 AYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR---- 245
Y +G EEA + + VVSW +++ G + + DA F +M
Sbjct: 478 GYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKP 537
Query: 246 DEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
+ + +T++ A + L + + + + V D++ TA++ Y + GK+ A +F
Sbjct: 538 NSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVF 597
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEI 356
+ EK WN M+ GY + LF+ M CK + ++ +++G SG +
Sbjct: 598 RNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNM-CKTGIRPDAITFTALLSGCKNSGLV 656
Query: 357 THARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
FD M I+ ++ ++ ++G+ +++L M ++ + S + +
Sbjct: 657 MDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMP---QKADASIWGA 713
Query: 412 VLSTC 416
VL+ C
Sbjct: 714 VLAAC 718
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 30/340 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
++D+ + +++N C + A VF+ ++ ++N++ISGY G D A ++ Q
Sbjct: 400 EYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQ 459
Query: 118 MPQR----DLVSWNVMISGY----VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
M + DLV+WN ++SGY ++L+ + + +VVSW M+SG QN
Sbjct: 460 MKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNEN 519
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIE--EACMLFESKANW--EVVSWNS 221
A + F +M E+ N + + LL A ++ E F K + ++ +
Sbjct: 520 YTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATA 579
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKD 277
L+ + K +L A +F + + WN M+ GYA + E LF+ D
Sbjct: 580 LIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPD 639
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
T+TA++SG +G V + FD+M +++ ++ M+ + +D A +
Sbjct: 640 AITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFI 699
Query: 333 EAMTCKNVAS-WNTMITGYAQSGEI----THARNLFDRMP 367
AM K AS W ++ +I ARNLF P
Sbjct: 700 HAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEP 739
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/547 (40%), Positives = 330/547 (60%), Gaps = 16/547 (2%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQN-NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
L DA +F + D S NT+I+ +++ +L A+ LF+ P +D F W+A+VSGY +
Sbjct: 79 LPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYAR 138
Query: 291 NGKVDEARMIFDAMPEK-------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS- 342
+G+ + A ++ M E+ N + ++ +A + REL + + + +
Sbjct: 139 HGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAA 198
Query: 343 ------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
W+ + YA+ G + AR +FDRMP D +SW A++ Y G + RLF+
Sbjct: 199 GGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLH 258
Query: 397 MKRY-GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M R G R N + VL CA A G+Q+HG++ K G CF +ALL MY KCG
Sbjct: 259 MLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCG 318
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ A FE + D++SW +I+GYA++G ++AL F+ GIKPD +T VG+LS
Sbjct: 319 DMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLS 378
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GLV+KG E F+S+ Y + + HY C++DLL R+G+ + A+ ++ NM +P+
Sbjct: 379 ACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNK 438
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
W +LLG CR++ LA +AAE +FE+EPEN YV L+N+YA+ G + +V VR M
Sbjct: 439 FLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIM 498
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+G+ K+ SW+EV +VH F VGD HP+ D IYA L++L K+ ++G+V + VL
Sbjct: 499 ESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVL 558
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HDV +E+KE + YHSE+LAVA+GI++ P G PI+V KNLR+C DCH AIK IS+IV R
Sbjct: 559 HDVEDEQKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHAAIKLISQIVQRD 618
Query: 756 IILRDNN 762
II+RD+N
Sbjct: 619 IIVRDSN 625
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 194/713 (27%), Positives = 306/713 (42%), Gaps = 130/713 (18%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRN-KSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
L A +F + D+ S N +IS R+ + L +AR LF+ MP+RD +W+ ++SGYA+
Sbjct: 79 LPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYAR 138
Query: 167 NGYADAARRIFDRMLEK-------NEISWNGLLAAYV-----QNGRIEEACMLFE---SK 211
+G +AA ++ RM E+ NE + + LAA + GR E C +
Sbjct: 139 HGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGR-ELHCHVVRRGIDA 197
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF- 270
A + V W++L + K R+ DA+ +FDRMPVRD VSW M+ Y E RLF
Sbjct: 198 AGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFL 257
Query: 271 ----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQT 322
+ FT+ ++ + R + M + T + +A++ Y +
Sbjct: 258 HMLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKC 317
Query: 323 KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
M A +FEAM ++ SW +I+GYAQ+G+
Sbjct: 318 GDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ--------------------------- 350
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
E++LR F R G + + F VLS CA H LV G E
Sbjct: 351 ----PEEALRYFDMFLRSGIKPDHVTFVGVLSACA-----------HAGLVDKGLE---- 391
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+ +++ YC E D + +I +R G + A + +M
Sbjct: 392 IFHSIKEQYC-----------IEHTADH----YACVIDLLSRSGQFERAEKMIGNM---A 433
Query: 503 IKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
+KP+ +L C + GL + E + + + N Y + ++ G
Sbjct: 434 VKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPE-----NPATYVTLANIYASVGLF 488
Query: 560 DEAQNLMKNMPFEP----DAATWGALLGACRLYGKTELAEKAAEVIF--EMEPENAGMYV 613
DE +++ + M + A++W E+ + + + P+ +Y
Sbjct: 489 DEVEDVRRIMESKGITKMPASSW------------IEVGRRVHVFLVGDKSHPKADEIYA 536
Query: 614 LLSNLYAA---SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
LL LY G D+ V + D ++ GY ++ + G PE
Sbjct: 537 LLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGY-----HSERLAVAFGIIASPEGSP 591
Query: 671 IYAY-----LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
I + + +K + +++ D KE + YHSE+LAVA+GI++ P
Sbjct: 592 IKVFKNLRICGDCHAAIKLISQIVQRDIIVRD-SNSLKEQDIGYHSERLAVAFGIIASPE 650
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PI+V KNLR+C DCH AIK IS+IV R II+RD+NRFHHF G CSC DYW
Sbjct: 651 GSPIKVFKNLRICGDCHTAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 703
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 153/346 (44%), Gaps = 55/346 (15%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR-------DLVSWNVMIS 131
SA +F+ MP+R +++A++SGY +GQ + A ++ +M + + + + ++
Sbjct: 113 SARELFDRMPQRDHFAWSALVSGYARHGQPEAALALYRRMQEEPGNDGADNEFTASSALA 172
Query: 132 GYVRNKSLSAARNLFEMMPKR-------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
+ A R L + +R D V W+ + YA+ G D ARR+FDRM ++
Sbjct: 173 AAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRD 232
Query: 185 EISWNGLLAAYVQNGRIEEACMLF--------------------ESKANWEVVSWNSLMG 224
+SW ++ Y GR E LF + A + V S+ +
Sbjct: 233 AVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVH 292
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G + + GD+ + + + ++ Y++ + A R+FE D+ +WTA+
Sbjct: 293 GRMAKSGTGDSCF-----------AESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAV 341
Query: 285 VSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMT---C 337
+SGY QNG+ +EA FD + + V++ +++ +D E+F ++ C
Sbjct: 342 ISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYC 401
Query: 338 --KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ +I ++SG+ A + M + + WA+++ G
Sbjct: 402 IEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGG 447
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 25/298 (8%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMP 150
+V ++A+ Y G++D AR+VFD+MP RD VSW M+ Y LF M+
Sbjct: 202 AVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLR 261
Query: 151 KRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIE 202
R V ++ +L A+ R++ RM + + + LL Y + G +
Sbjct: 262 TRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMG 321
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVR-DEVSWNTMITGYA 258
A +FE+ A ++VSW +++ G+ + + +A FD R ++ D V++ +++ A
Sbjct: 322 SAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACA 381
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTA-----MVSGYVQNGKVDEA-RMIFDAMPEKNTVSW 312
+ + +F + TA ++ ++G+ + A +MI + + N W
Sbjct: 382 HAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLW 441
Query: 313 NAMIAGYVQTKRMDMARELFEAM---TCKNVASWNTMITGYAQSG---EITHARNLFD 364
+++ G K + +AR EA+ +N A++ T+ YA G E+ R + +
Sbjct: 442 ASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIME 499
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 126/313 (40%), Gaps = 55/313 (17%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ-------- 107
A D W+ + + G D A VF+ MP R +VS+ AM+ Y G+
Sbjct: 197 AAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLF 256
Query: 108 --------LDP--------------------ARQVFDQMPQR----DLVSWNVMISGYVR 135
+ P RQV +M + + + ++ Y +
Sbjct: 257 LHMLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSK 316
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGL 191
+ +A +FE M K D+VSW ++SGYAQNG + A R FD L + + +++ G+
Sbjct: 317 CGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGV 376
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
L+A G +++ +F S + + ++ + + A+ + M V+
Sbjct: 377 LSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKP 436
Query: 246 DEVSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
++ W +++ G + + A+R LFE P ++ T+ + + Y G DE +
Sbjct: 437 NKFLWASLLGGCRIHKNVGLARRAAEALFEIEP-ENPATYVTLANIYASVGLFDEVEDVR 495
Query: 302 DAMPEKNTVSWNA 314
M K A
Sbjct: 496 RIMESKGITKMPA 508
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/677 (35%), Positives = 372/677 (54%), Gaps = 50/677 (7%)
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
P + ++S A N +A +I L ++ + + AY+Q G + A F
Sbjct: 14 PTKTLLSLFRFTKTLASNHQLNA--QILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFN 71
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV--SWNTMITGYAQNNY-LAEA 266
+ SWN+++ K K D +F RM ++ S+N + A L +
Sbjct: 72 HITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQG 131
Query: 267 QRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
+LF +K D + A+++ Y + G ++EA +F+ +P KN+V W MI G++
Sbjct: 132 AKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLN 191
Query: 322 TKRMDMARELFEAM-----------------TCKNVAS---------------------- 342
ELF M C NV +
Sbjct: 192 FSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFF 251
Query: 343 -WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+++ Y + G + A LF+ + D + W+AIIAG+A++G + +S+ +F +M
Sbjct: 252 LQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADS 311
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
N F S++ C++L SL+ G+ +HG +++ G E + + MY KCG + AY
Sbjct: 312 VTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAY 371
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F +I +K+V SW+TMI G+ HG +AL LF M++V P+ +T V +LSACSH+G
Sbjct: 372 RVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSG 431
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+E+G +F SM+RDYG+ P +HY CMVDLLGRAG++DEA + + NMP EP A+ WGAL
Sbjct: 432 RIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGAL 491
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++ + ELAE+ A+ + +E + +G+YV+LSN+YA G W V K RLKM ++G+
Sbjct: 492 LGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIH 551
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K+ G++ +E++ K++ FS D + +I + L+ ++++ G+V + VLHDV +E
Sbjct: 552 KIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDE 611
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
K+ +L HSEKLA+ +G+L+ G PIR+ KN+RVC DCH A K IS I R II+RD
Sbjct: 612 VKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDV 671
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHH G CSCGDYW
Sbjct: 672 KRFHHVQDGVCSCGDYW 688
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 170/391 (43%), Gaps = 57/391 (14%)
Query: 92 SVSYNAMISG-YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
S+ + MI G Y+ G L A + F+ + +L SWN +++ + +NK LF+ M
Sbjct: 46 SLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRML 105
Query: 151 K--RDVVSWNTMLSGYAQNGYA-DAARRIFDRM-----LEKNEISWNGLLAAYVQNGRIE 202
K + V S+N + + A G + ++F + LE + L+ Y + G +E
Sbjct: 106 KEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLE 165
Query: 203 EACMLFESKANWEVVSWNSLMGG-------------FVKQKRLG---------------- 233
EA +FE V W ++ G F + +R G
Sbjct: 166 EAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACG 225
Query: 234 ------DAKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ K ++ + N +++ Y + +L A +LFEE +DV W+
Sbjct: 226 NVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWS 285
Query: 283 AMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
A+++G+ +NG+ E+ +F M N+V++ +++ + R + M
Sbjct: 286 AIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN 345
Query: 339 ----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+V ++ + I YA+ G I A +F ++P+ + SW+ +I G+ G ++L LF
Sbjct: 346 GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLF 405
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELG 425
EM+ + N F SVLS C++ +E G
Sbjct: 406 YEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 436
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 169/403 (41%), Gaps = 65/403 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV--SYN--------------------- 96
++ WN + +H +N C L +F M + + S+N
Sbjct: 77 NLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFH 136
Query: 97 ----------------AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
A+++ Y G L+ A +VF+++P ++ V W VMI G++
Sbjct: 137 SLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEF 196
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQ---NGYADAARRIFDRM-LEKNEISWN-----GL 191
LF M + ++ G Q N YA + F + ++KN I N L
Sbjct: 197 GVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSL 256
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDE 247
+ Y++ G ++ A LFE + +VV W++++ GF + R ++ +F +M +
Sbjct: 257 VDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNS 316
Query: 248 VSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
V++ +++ + L + + + DV +T+ + Y + G + A +F
Sbjct: 317 VTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQ 376
Query: 304 MPEKNTVSWNAMIAGY----VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+PEKN SW+ MI G+ + + +++ E+ N ++ ++++ + SG I
Sbjct: 377 IPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 436
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEM 397
+ F M + I+ +A ++ ++G +++L M
Sbjct: 437 WSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNM 479
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 7/222 (3%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R+P ++LS +L QL+ Q++ G + Y + GS+ A AF
Sbjct: 11 SRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAF 70
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
I +++ SWNT++A ++++ D L LF+ M G D +V + AC L +
Sbjct: 71 NHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQ 130
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL--- 581
G + F+S+ + + ++++ G L+EA + + +P + ++ WG +
Sbjct: 131 -GAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLK-NSVIWGVMIKG 188
Query: 582 -LGACRLYGKTELAEKAAEVIFEMEPENA-GMYVLLSNLYAA 621
L +G EL + FE++P G+ N+YA
Sbjct: 189 HLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAG 230
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 45/280 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ +M+ G D AL +F + R V ++A+I+G+ NG+ + +F QM + +
Sbjct: 257 VDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNS 316
Query: 128 VMISGYVRN----KSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDR 179
V + V SL R++ M + DV ++ + + YA+ G A R+F +
Sbjct: 317 VTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQ 376
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
+ EKN SW+ ++ + +G EA LF +E+ S N L
Sbjct: 377 IPEKNVFSWSTMINGFGMHGLCAEALNLF-----YEMRSVNQL----------------- 414
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-------APVKDVFTWTAMVSGYVQNG 292
+ V++ ++++ + + + E F+ PV++ + MV + G
Sbjct: 415 -----PNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEE--HYACMVDLLGRAG 467
Query: 293 KVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAREL 331
K+DEA + MP E +W A++ +R ++A E+
Sbjct: 468 KIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEV 507
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 330/572 (57%), Gaps = 39/572 (6%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + N ++ YA A+ LFE P ++V +W ++ GYV+NG ++ AR +FD MP
Sbjct: 76 DRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMP 135
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAM--------------TCKNVASWNTMITG-- 349
+N +WNAM+AG + + + F AM + A +++G
Sbjct: 136 ARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQ 195
Query: 350 -----------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
Y + G + +P + +S I+G Q+G
Sbjct: 196 VHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGD 255
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+E +L F M+ G N F S +++C++LA+L G+Q+H +K G + V +
Sbjct: 256 AEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTS 315
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY +CG + ++ E D++ + MI+ Y HG G+ A+ LF+ M G +P+
Sbjct: 316 LVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPN 375
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
++T + +L ACSH+GL ++G F M + YG+ P+ KHYTC+VDLLGR+G L+EA++L+
Sbjct: 376 EVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLI 435
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+MP +PD W LL AC+ K ++AE+ AE + E++P ++ YVLLSN+ A S RW
Sbjct: 436 LSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWE 495
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DVSKVR MR++ V+K G SW+E++ ++H F GD H + I LEE+ +++Q G
Sbjct: 496 DVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCG 555
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ +V HD+ +EEKE L +HSEKLA+A+ LS+P G PIRVMKNLRVC+DCH AIK
Sbjct: 556 YAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIK 615
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+SK++GR I++RD +RFHHF G CSCGDYW
Sbjct: 616 LMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 167/401 (41%), Gaps = 39/401 (9%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
+ N ++ Y G AR +F+++P+R+++SWN++I GYV+N L AR LF+ MP R+
Sbjct: 79 TANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARN 138
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM--LFESK 211
V +WN M++G +G NE S A + + +E + LF
Sbjct: 139 VATWNAMVAGLTNSGL--------------NEESLGFFFAMRREGMQPDEYGLGSLFRCC 184
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
A V + +V + L RD +++ Y + +L + +
Sbjct: 185 AGLRDVVSGRQVHAYVVRSGLD-----------RDMCVGSSLAHMYMRCGFLRDGEAALR 233
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDM 327
P ++ + +SG QNG + A F M E N V++ + + +
Sbjct: 234 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 293
Query: 328 ARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+++ A+ K V +++ Y++ G + + + D + +A+I+ Y
Sbjct: 294 GQQI-HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYG 352
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGC 441
G+ + ++ LF +M G N F ++L C++ + G + K G +
Sbjct: 353 FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSV 412
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
++ + + G + EA + V D + W T+++
Sbjct: 413 KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 148/360 (41%), Gaps = 59/360 (16%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+A +F +P+R+ +S+N +I GY+ NG L+ AR++FD+MP R++ +WN M++G +
Sbjct: 95 TARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGL 154
Query: 139 LSAARNLFEMMPK--------------------RDVVS-------------------WNT 159
+ F M + RDVVS ++
Sbjct: 155 NEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSS 214
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
+ Y + G+ + N +S N ++ QNG E A C++ +
Sbjct: 215 LAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEAN 274
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLF 270
V++ S + L + I + ++ V +++ Y++ L +++R+
Sbjct: 275 AVTFVSAVTSCSDLAALAQGQQIH-ALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVC 333
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMD 326
E D+ +AM+S Y +G +A +F M E N V++ ++ + D
Sbjct: 334 LEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKD 393
Query: 327 MARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
FE MT +V + ++ +SG + A +L MP Q D + W +++
Sbjct: 394 EGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 398 KRYGERLNRSP--FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+R+ E L P F+ + C +L L +QLH G A F N LL+ Y G
Sbjct: 35 RRFREGLWSEPGLFSHIFRACQ---ALPLLRQLHAFAATSGAAADRFTANHLLLAYADLG 91
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
A FE I ++V+SWN +I GY ++G + A LF+ M + + + G+
Sbjct: 92 DFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGL-- 149
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+++GL E+ +F++M R+ G+ P+
Sbjct: 150 --TNSGLNEESLGFFFAMRRE-GMQPD 173
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/534 (40%), Positives = 336/534 (62%), Gaps = 9/534 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D V NT++ YA+ L EA+++FE+ P +D TWT ++SGY Q+ + +A + F+ M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 306 E----KNTVSWNAMIAGYVQTKRMDMARELFE-AMTC---KNVASWNTMITGYAQSGEIT 357
N + +++I +R +L + C NV + ++ Y + G +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A+ +FD + + +SW A+IAG+A+ +E +L LF M R G R + + S+ C+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ LE GK +H ++K G + F GN LL MY K GS+ +A F+ + +DV+SWN+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
++ YA+HGFGK+A+ FE M+ VGI+P++I+ + +L+ACSH+GL+++G Y+ M +D
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD- 392
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G++P + HY +VDLLGRAG L+ A ++ MP EP AA W ALL ACR++ TEL A
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE +FE++P++ G +V+L N+YA+ GRW D ++VR KM++ GVKK SW+E++N +H
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 512
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP+++ I EE+ K+K+ G+V T V+ V ++E+E L+YHSEK+A+A
Sbjct: 513 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
+ +L+ P G I + KN+RVC DCH AIK SK+VGR II+RD NRFHHF S
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 247/557 (44%), Gaps = 116/557 (20%)
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
+N++ ++ +V + +I G +++ + + + D+V N +++ Y + SL AR
Sbjct: 63 YNTLLKKCTV-FKLLIQGRIVHAH------ILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNG 199
+FE MP+RD V+W T++SGY+Q+ A F++ML NE + + ++ A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 200 R------IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
R + C+ +N V S +L+ + + + DA+ +FD + R++VSWN +
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGS--ALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 254 ITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMV-----SGYVQNGKVDEARMIFDAM 304
I G+A+ + +A LF+ + F++ ++ +G+++ GK A MI +
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI-KSG 292
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
+ + N ++ Y ++ + AR++F+ + ++V SWN+++T
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT---------------- 336
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
YAQ G+ ++++ F EM+R G R N F SVL+ C++ L+
Sbjct: 337 ---------------AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G + +L+K K G V EA+H + T++ R
Sbjct: 382 GWHYY-ELMK------------------KDGIVPEAWH------------YVTVVDLLGR 410
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIP 541
G AL E M I+P +L+AC +T L E+ + ++ D
Sbjct: 411 AGDLNRALRFIEEMP---IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD----- 462
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNM-----PFEPDAATWGALLGACRLY-------- 588
+ + + ++ GR ++A + K M EP A +W + A ++
Sbjct: 463 DPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEP-ACSWVEIENAIHMFVANDERHP 521
Query: 589 GKTELAEKAAEVIFEME 605
+ E+A K EV+ +++
Sbjct: 522 QREEIARKWEEVLAKIK 538
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 153/353 (43%), Gaps = 56/353 (15%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ S+ R V N +++ Y G L+ AR+VF++MPQRD V+W +ISGY ++
Sbjct: 85 HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD 144
Query: 142 ARNLFEMMPK---------------------------------------RDVVSWNTMLS 162
A F M + +V + +L
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVS 218
Y + G D A+ +FD + +N++SWN L+A + + E+A LF+ S
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ SL G L KW+ M E + NT++ YA++ + +A+++F+
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
+DV +W ++++ Y Q+G EA F+ M N +S+ +++ + +D
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 331 LFEAMTCKNVA--SWN--TMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
+E M + +W+ T++ ++G++ A + MP + W A++
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 178/411 (43%), Gaps = 54/411 (13%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSY--NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
R GCC LH F S + +A++ Y G +D A+ VFD + R+ VSWN +I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 131 SGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNE- 185
+G+ R A LF+ M + S+ ++ + G+ + + + M++ E
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 186 ---ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD-- 240
+ N LL Y ++G I +A +F+ A +VVSWNSL+ + + +A W F+
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 241 -RMPVR-DEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKV 294
R+ +R +E+S+ +++T + + L E +E + V + + + +V + G +
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 295 DEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM----ARELFEA---MTCKNVASWNTM 346
+ A + MP E W A++ K ++ A +FE +V +N
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 347 ITG------------YAQSG----------EITHARNLF----DRMPQHDCIS--WAAII 378
+G +SG EI +A ++F +R PQ + I+ W ++
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
A + GY D+ + + + + +N + ++ L + G +H
Sbjct: 535 AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIH 585
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R + ++L C L G+ +H +++ F +GN LL MY KCGS+EEA F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E++ +D ++W T+I+GY++H DAL+ F M G P++ T+ ++ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + + G N + ++DL R G +D+AQ + + D +W AL+
Sbjct: 179 CGHQ-LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIAG 236
Query: 585 CRLYGKTELAEKAAEVI 601
+ + EKA E+
Sbjct: 237 ---HARRSGTEKALELF 250
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/641 (35%), Positives = 362/641 (56%), Gaps = 24/641 (3%)
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
N++++ Y + AR++FD M +N +SW+ L+A Y+QNG E LF+ VV
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKM----VV 116
Query: 218 SWNSLMGGFVKQKRLG--DAKWIFDRMPVR----------DEVSWNTMITGYAQNNYLAE 265
N +V + D++ + + N +I Y++ + +
Sbjct: 117 KDNIFPNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGA 176
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQ 321
A ++ P D+F + +V+G +Q+ + EA ++I E N ++ +
Sbjct: 177 AIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCAS 236
Query: 322 TKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
K + + +++ M ++ +++I Y + G + R FDR+ + +SW +I
Sbjct: 237 LKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSI 296
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IA Y Q+ + E++L LF +M+ N + ++ A L++L LG QLH + K G
Sbjct: 297 IAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGL 356
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ VGNAL++MY K G + A F + ++I+WN +I G++ HG GK+AL +F+
Sbjct: 357 KGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQD 416
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M G +P+ +T +G++ AC+H LV++G YF + + + ++P +HYTC+V LL R+G
Sbjct: 417 MMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSG 476
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN 617
RLDEA+N M++ D +W LL AC ++ + K AE + ++EP + G Y+LLSN
Sbjct: 477 RLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSN 536
Query: 618 LYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEE 677
++A RW V ++R MR+R VKK G SWLE++N H F+ D HPE + IY +++
Sbjct: 537 MHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKD 596
Query: 678 LEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRV 737
L K++ G+V VLHD+ +E+K L YHSEKLAVAYG++ P+G PI V+KNLR+
Sbjct: 597 LLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRM 656
Query: 738 CEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
C+DCH AIK ISK+ R+I++RD NRFHHF G CSCGDYW
Sbjct: 657 CDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 195/461 (42%), Gaps = 107/461 (23%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N +I+ YV+ +S AR LF+ MP+R+VVSW+ +++GY QNG +F +M+ K+ I
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 187 SWNGLLAA----------YVQNGRIEEACMLFESKANWEVVSW--NSLMGGFVKQKRLGD 234
N + A YV+ + C + K+ E + N+L+ + K +G
Sbjct: 121 FPNEYVIATAISSCDSQMYVEG----KQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGA 176
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------------------AP 274
A I +P D +N ++ G Q+ ++AEA + + A
Sbjct: 177 AIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCAS 236
Query: 275 VK-------------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
+K DV+ ++++ Y + G V R FD + +N VSW ++
Sbjct: 237 LKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSI 296
Query: 316 IAGYVQTKRMDMARELFEAMTCK------------------------------------- 338
IA Y Q + + A LF M
Sbjct: 297 IAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGL 356
Query: 339 --NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
NV N +I Y +SG+I A+++F M + I+W AII G++ G +++L +F +
Sbjct: 357 KGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQD 416
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-----VGFEA-GCFVGNALLVM 450
M GER N F V+ CA+L ++ G L+K G E C VG +
Sbjct: 417 MMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVG-----L 471
Query: 451 YCKCGSVEEAYHAF-EEIVDKDVISWNTMI-AGYARHGFGK 489
+ G ++EA + ++ DV+SW T++ A Y + K
Sbjct: 472 LSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDK 512
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 28/337 (8%)
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-------VASWNTMITG 349
+R F A P ++ + + A K + R + +T N V N++I
Sbjct: 10 SRSNFLASPHQDPIKLLKVAA---DAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINL 66
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL-NRSP 408
Y + E++ AR LFD MP+ + +SW+A++AGY Q+G + LF +M N
Sbjct: 67 YVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYV 126
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ +S+C + +E GKQ HG +K G E +V NAL+ +Y KC V A +
Sbjct: 127 IATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVP 185
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
D+ +N ++ G +H +A+ + + + + GI+ ++ T V I C+ + G +
Sbjct: 186 GNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQ 245
Query: 529 YFYSMNR---DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
M + D V S ++D+ G+ G + + + + +W +++ A
Sbjct: 246 VHAQMLKSDIDCDVYIGSS----IIDMYGKCGNVLSGRTFFDRLQ-SRNVVSWTSIIAA- 299
Query: 586 RLYGKTELAEKAAEVIFEME-----PENAGMYVLLSN 617
Y + E E+A + +ME P M VL ++
Sbjct: 300 --YFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNS 334
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 131/334 (39%), Gaps = 61/334 (18%)
Query: 76 CCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN-----V 128
C D +A+ + ++P YN +++G L + + A V ++ + + WN
Sbjct: 171 CSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVL-KLIISEGIEWNNATYVT 229
Query: 129 MISGYVRNKSLSAARNLFEMMPKRD----VVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
+ K ++ + + M K D V ++++ Y + G + R FDR+ +N
Sbjct: 230 IFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRN 289
Query: 185 EISWNGLLAAYVQNGRIEEACMLF------------------------------------ 208
+SW ++AAY QN EEA LF
Sbjct: 290 VVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHA 349
Query: 209 ---ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
+S V+ N+L+ + K + A+ +F M + ++WN +ITG++ + E
Sbjct: 350 RAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKE 409
Query: 266 AQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMI 316
A +F++ + T+ ++ VDE F+ + ++ + + ++
Sbjct: 410 ALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIV 469
Query: 317 AGYVQTKRMDMARELFEAMTCK-NVASWNTMITG 349
++ R+D A + +V SW T++
Sbjct: 470 GLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNA 503
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPK 151
NA+I Y +G + A+ VF M ++++WN +I+G+ + ++LS +++ +
Sbjct: 364 NALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGER 423
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI-----SWNGLLAAYVQNGRIEEACM 206
+ V++ ++ A D F+ ++++ I + ++ ++GR++EA
Sbjct: 424 PNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAEN 483
Query: 207 LFES-KANWEVVSWNSLMGGFVKQKRLGDAKWIFD---RMPVRDEVSWNTMITGYAQN-- 260
S + NW+VVSW +L+ K + I + ++ RD ++ + +A+
Sbjct: 484 FMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRR 543
Query: 261 -NYLAEAQRLFEEAPVK 276
+++ E ++L E VK
Sbjct: 544 WDHVVEIRKLMRERNVK 560
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/644 (37%), Positives = 364/644 (56%), Gaps = 56/644 (8%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N L+ ++G + EA +F++ + + SWN ++ + + A +F +M V
Sbjct: 80 NLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDV--PP 137
Query: 249 SWNTMITGYAQNNYLAEAQRLFE-EAPVK-------DVFTWTAMVSGYVQNGKVDEARMI 300
+ T T + + L + QR E A +K V TA+ S Y + G + A+ +
Sbjct: 138 TAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSV 197
Query: 301 FDAMPEKNTVSWNAMIAGYVQT-KRMDMARELFEAMT-----------------CKNVAS 342
FD +P KN VSWNA+IA Y Q+ A +LFE M C +V S
Sbjct: 198 FDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTS 257
Query: 343 W----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
N ++ YA+ G + AR++F +M + D +S +IA
Sbjct: 258 LEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIAT 317
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
+AQ G ++S+++F EM G + + F SV++ C+ +LE GK++H ++V+
Sbjct: 318 FAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRK 377
Query: 441 CFVGN-----ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
C + N AL+ MY KCG++E+A F+ + K+ +SWN M+A A G G +A
Sbjct: 378 CCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFL 437
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ G++ D + + +L ACSH+G++E ++F M D+ ++P +++Y CMVDLL R
Sbjct: 438 RAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLAR 497
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
+GRL +A LM +MPF PDA W LLG CR+ G E A AAE F +EP+N Y LL
Sbjct: 498 SGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLL 557
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKK-VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
S+LY+A+G+ ++ ++R M++RG++K V G S +EV +VH F GD+ HP+ D+I
Sbjct: 558 SSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRE 617
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
L+ L +LKQ GFV ST V+HD+ E+KE +L HSEKLAVA+G++S +G P+ V+KN
Sbjct: 618 LDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKN 677
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LRVC DCH AIK ISK+ R+I +RD NRFH F G+CSCGDYW
Sbjct: 678 LRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 228/513 (44%), Gaps = 80/513 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP-RRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
+I WN+ I+ + G +ALH+F M +++++ +S G L R++ ++
Sbjct: 106 NIFSWNIIISAYAHRGHPSTALHLFAKMDVPPTAMTFATALSACSSLGDLQRGREIHARI 165
Query: 119 PQRDLVSWNVMI-----SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA-DA 172
+ +V++ S Y + LS A+++F+ +P ++VVSWN +++ YAQ+G++
Sbjct: 166 KASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQ 225
Query: 173 ARRIFDRMLEKN----EISWNGLLAAYVQ-------NGRIEEACMLFESKANWEVVSWNS 221
A +F++M E ++ G+L A + RI E + F+ + +V N+
Sbjct: 226 ALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEKIHARIVETGLQFDVR---DVGVQNA 282
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KD 277
L+ + K L A+ IF +M RD+VS N MI +AQ E+ ++F E + +D
Sbjct: 283 LLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQD 342
Query: 278 VFTWTAMVS-----GYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMA 328
T+ ++++ G ++ GK R++ + K N V A+++ Y + ++ A
Sbjct: 343 DTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQA 402
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+ +F+AMT KN SWN M +A A G +
Sbjct: 403 KAVFKAMTTKNSVSWNAM-------------------------------LAACAHQGQGD 431
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-------GC 441
++ G L+ + F SVL C++ LE+ H QL+ F+ C
Sbjct: 432 EAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYD-HFQLMLSDFDLVPAAENYRC 490
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
V LL + G +E ++ D I+W T++ G G ++A E +
Sbjct: 491 MVD--LLARSGRLGDADELMNSMP--FSPDAIAWRTLLGGCRVQGSLENAASAAE--QAF 544
Query: 502 GIKPDDITMVGILSAC-SHTGLVEKGTEYFYSM 533
++P + +LS+ S TG ++ E SM
Sbjct: 545 NLEPQNTAPYTLLSSLYSATGKKDELVELRSSM 577
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F + + +C + S+ + +H ++ + G + ++ N L++M K GS+ EA F+ I
Sbjct: 47 FAAAIRSCKDSNSVSI---IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQ 103
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
K++ SWN +I+ YA G AL LF M + P +T LSACS G +++G E
Sbjct: 104 HKNIFSWNIIISAYAHRGHPSTALHLFAKMD---VPPTAMTFATALSACSSLGDLQRGRE 160
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+ G+ P+ T + + + G L A+++ +P + + +W AL+ A Y
Sbjct: 161 IHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAK-NVVSWNALIAA---Y 216
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS---KVRLKMRDRGVK 641
++ + A +FE E+ G+ + G DV+ K+ ++ + G++
Sbjct: 217 AQSGHSHHQALDLFEKMAEH-GVRPCRATFVGVLGACNDVTSLEKIHARIVETGLQ 271
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 172/426 (40%), Gaps = 73/426 (17%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQ-----LD-----------PARQVFD------ 116
+A VF+ +P ++ VS+NA+I+ Y +G LD P R F
Sbjct: 193 TAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGAC 252
Query: 117 ------------------QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
Q RD+ N +++ Y + SL AR++F M +RD VS N
Sbjct: 253 NDVTSLEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMN 312
Query: 159 TMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN- 213
M++ +AQ G + ++F M L +++ ++ ++ A G +E + +
Sbjct: 313 VMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEP 372
Query: 214 --------WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
VV +L+ + K L AK +F M ++ VSWN M+ A E
Sbjct: 373 VLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDE 432
Query: 266 AQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEA-----RMI--FDAMPEKNTVSWNA 314
A E D ++ +++ +G ++ A M+ FD +P ++
Sbjct: 433 AAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAE--NYRC 490
Query: 315 MIAGYVQTKRMDMARELFEAMT-CKNVASWNTMITGYAQSGEI----THARNLFDRMPQH 369
M+ ++ R+ A EL +M + +W T++ G G + + A F+ PQ
Sbjct: 491 MVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQ- 549
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
+ + + + Y+ +G ++ + L MK G R P SV+ + G H
Sbjct: 550 NTAPYTLLSSLYSATGKKDELVELRSSMKERGLR-KLVPGRSVIEVHGRVHEFVAGDSSH 608
Query: 430 GQLVKV 435
Q+ K+
Sbjct: 609 PQIDKI 614
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/536 (40%), Positives = 320/536 (59%), Gaps = 8/536 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA----RMIFDAMPE 306
+++T YA+ L AQR+F+E P +WTA+++ Y+ G + EA R F
Sbjct: 157 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR 216
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG----YAQSGEITHARNL 362
++ + ++ + + ++ A + +A + T Y + GE+ AR +
Sbjct: 217 PDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREV 276
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD+M D ++W A++ GYA +G+ ++L LF+ M+ G R + LS C L +L
Sbjct: 277 FDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL 336
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LG+Q + F +G AL+ MY KCGS EA+ F+++ KD+I WN MI G
Sbjct: 337 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGL 396
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
G K A L M+ G+K +D T +G+L +C+HTGL++ G YF++M + Y + P
Sbjct: 397 GMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 456
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY C+VDLL RAG L EA L+ +MP +A GALLG C+++ ELAE +
Sbjct: 457 IEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 516
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+EP N+G YV+LSN+Y+ GRW D +K+RL M+++GV+KV SW+E + KVH F VGD
Sbjct: 517 RLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGD 576
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP D+IY L+EL ++K G+ +T++V+ DV +EEKEH L +HSEKLA+A+ +L
Sbjct: 577 KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLV 636
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IRV KNLRVC DCH AIK IS+I R II+RDNNRFH F GSCSC DYW
Sbjct: 637 TGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 147/392 (37%), Gaps = 78/392 (19%)
Query: 34 PYPSKKTLKRHLNSKSR-NKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS 92
P PS T L S SR P AG+ + ++ + +H HV S+
Sbjct: 113 PNPSHLTFPIALKSASRLPHPLRAGE-QLHARSLKLPSHTNP-------HVLTSL----- 159
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY------------------- 133
++ Y G L A++VFD+MP VSW +I+ Y
Sbjct: 160 ------LTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFAN 213
Query: 134 -VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA-------------------A 173
+R S +A R L D+ + T+ Q G A + A
Sbjct: 214 GMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKA 273
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKRL 232
R +FD+M +K+ ++W ++ Y NG EA LF + +A ++ G RL
Sbjct: 274 REVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRL 333
Query: 233 G--DAKWIFDRMPVRDE-----VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
G D RM DE V +I YA+ AEA +F++ KD+ W AM+
Sbjct: 334 GALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMI 393
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMIAGYVQTKRMDMARELFEAMT---- 336
G G A + M EK+ V N ++ T + R F MT
Sbjct: 394 LGLGMTGHEKTAFTLIGQM-EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYH 452
Query: 337 -CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ + ++ +++G + A L D MP
Sbjct: 453 ISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMP 484
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 13/243 (5%)
Query: 409 FTSVLSTCANLA-SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F L + + L L G+QLH + +K+ V +LL +Y +CG + A F+E+
Sbjct: 120 FPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEM 179
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+SW +I Y G ++A+ + + G++PD T V +L+AC+ + G
Sbjct: 180 PHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATG- 238
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
E + G+ + T VDL + G + +A+ + M + DA WGA++G
Sbjct: 239 ETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMR-DKDAVAWGAMVGG--- 294
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
Y +A ++ M+ E + + YA +G + RL D G + +
Sbjct: 295 YASNGHPREALDLFLAMQAEG-----VRPDCYAVAGALSACT--RLGALDLGRQAIRMVD 347
Query: 648 WLE 650
W E
Sbjct: 348 WDE 350
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 181/466 (38%), Gaps = 74/466 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
A + Y+ G++ AR+VFD+M +D V+W M+ GY N A +LF M +
Sbjct: 258 TAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 317
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLE-----KNEISWNGLLAAYVQNGRIEEACM 206
D + LS + G D R+ RM++ N + L+ Y + G EA +
Sbjct: 318 PDCYAVAGALSACTRLGALDLGRQAI-RMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWV 376
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI--------TGY 257
+F+ +++ WN+++ G A + +M +++ NT I TG
Sbjct: 377 VFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGL 436
Query: 258 AQNN--YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNA 314
Q+ Y +L+ +P + + +V + G + EA + D MP N V A
Sbjct: 437 IQDGRRYFHNMTKLYHISP--RIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGA 494
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++ G + ++A + + + WN SG N+
Sbjct: 495 LLGGCKIHRNAELAEHVLTQLI--RLEPWN--------SGNYVMLSNI------------ 532
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-------KQ 427
Y+ G ED+ +L ++MK G + + P S + + +G Q
Sbjct: 533 ------YSNRGRWEDAAKLRLDMKEKG--VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 584
Query: 428 LHGQLVKVGFEAGC--FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
++ +L ++G E + +VM+ EE H +K I++N ++ G
Sbjct: 585 IYKKLDELGLEMKTMGYEPTTEVVMFDV--EDEEKEHTLVHHSEKLAIAFNLLVTGPGE- 641
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
K + + D T + ++S +H ++ + F+
Sbjct: 642 --------TIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFH 679
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/608 (37%), Positives = 349/608 (57%), Gaps = 49/608 (8%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPV 275
N L+ KQ L A ++ + + +I A+ N L++A Q L +
Sbjct: 42 NHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFD 101
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+D F T +++ + + VD AR +FD ++ WNA+ R + EL+ M
Sbjct: 102 QDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRM 161
Query: 336 TCKNVAS-------------------------------------------WNTMITGYAQ 352
V+S T++ YA+
Sbjct: 162 NMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYAR 221
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM--KRYGERLNRSPFT 410
G +++A +FD MP + +SW+A+IA YA++G ++L LF EM + N
Sbjct: 222 FGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMV 281
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
SVL CA A+LE GK +H +++ G ++ V +AL+ MY +CG +E F+ + K
Sbjct: 282 SVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKK 341
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
DV+ WN++I+ Y HG+G+ A+ +FE M G P I+ + +L ACSHTGLVE+G + F
Sbjct: 342 DVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLF 401
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
SM +++G+ P+ +HY CMVDLLGRA RLDEA +++++ EP WG+LLGACR++
Sbjct: 402 ESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCH 461
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
ELAE+A++ +F++EP NAG YVLL+++YA + W +V +V+ + R ++KV G SW+E
Sbjct: 462 VELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIE 521
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
V+ K+++F+ D +P+ ++++A L L ++KQ G+ TKLVL+D+ +EEKE ++ H
Sbjct: 522 VRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGH 581
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SEKLAVA+G+++ G IR+ KNLR+CEDCH+ K ISK R I++RD NRFHHF G
Sbjct: 582 SEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDG 641
Query: 771 SCSCGDYW 778
CSCGDYW
Sbjct: 642 VCSCGDYW 649
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 115/232 (49%), Gaps = 27/232 (11%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----- 181
++ Y R +S A +F+ MP ++VVSW+ M++ YA+NG A +F M+
Sbjct: 213 TTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHD 272
Query: 182 -EKNEISWNGLLA-----AYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKRLGD 234
N ++ +L A ++ G++ A +L + V+S +L+ + + +L
Sbjct: 273 SVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVIS--ALITMYARCGKLES 330
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFTWTAMVSGY 288
+ IFDRM +D V WN++I+ Y + Y +A ++FEE +P ++ +++
Sbjct: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSH--ISFISVLGAC 388
Query: 289 VQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM 335
G V+E + +F++M +++ + + M+ + R+D A ++ E +
Sbjct: 389 SHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL 440
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 45/185 (24%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF--------DQMP--- 119
+ R GC A VF+ MP ++ VS++AMI+ Y NG+ A ++F D +P
Sbjct: 219 YARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSV 278
Query: 120 --------------------------QRDLVSW----NVMISGYVRNKSLSAARNLFEMM 149
+R L S + +I+ Y R L + + +F+ M
Sbjct: 279 TMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRM 338
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEAC 205
K+DVV WN+++S Y +GY A +IF+ M++ + IS+ +L A G +EE
Sbjct: 339 HKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGK 398
Query: 206 MLFES 210
LFES
Sbjct: 399 KLFES 403
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 28/296 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE--MMPKRD 153
++ Y G + A VFD+MP +++VSW+ MI+ Y +N A LF M+ D
Sbjct: 213 TTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHD 272
Query: 154 VVSWNTMLSGYAQNGYADAARR--------IFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
V + + Q A AA I R L+ + L+ Y + G++E
Sbjct: 273 SVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQ 332
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNN 261
++F+ +VV WNSL+ + A IF+ M +S+ +++ +
Sbjct: 333 LIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTG 392
Query: 262 YLAEAQRLFEEAPVKD------VFTWTAMVSGYVQNGKVDE-ARMIFDAMPEKNTVSWNA 314
+ E ++LFE VK+ V + MV + ++DE A++I D E W +
Sbjct: 393 LVEEGKKLFESM-VKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGS 451
Query: 315 MIAG---YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS---GEITHARNLFD 364
++ + + + A + + N ++ + YA++ E+ + L D
Sbjct: 452 LLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLD 507
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/649 (35%), Positives = 372/649 (57%), Gaps = 31/649 (4%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
S+ A ++F + + D ++N M+ G+ A +F M E + VQ
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENS-----------VQ 121
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
C+L + + + +S + + + G ++ NT+I Y
Sbjct: 122 PDEFTFPCIL-KVCSRLQALSEGEQIHALIMKCGFGSHGFV-----------KNTLIHMY 169
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWN 313
A + A+R+F+E ++V TW +M +GY ++G +E +F M E + V+
Sbjct: 170 ANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLV 229
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG----YAQSGEITHARNLFDRMPQH 369
+++ + +++ + + K + T+IT YA+ G++ AR LFD+M +
Sbjct: 230 SVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRR 289
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D ++W+A+I+GY+Q+ ++L LF EM++ N S+LS+CA L +LE GK +H
Sbjct: 290 DVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVH 349
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
+ K + +G AL+ Y KCGSVE + F ++ K+V+SW +I G A +G GK
Sbjct: 350 FFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGK 409
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
AL F M ++P+D+T +G+LSACSH GLV++G + F SM+RD+G+ P +HY CM
Sbjct: 410 KALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCM 469
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
VD+LGRAG ++EA +KNMP +P+A W LL +C+++ E+ E++ + + +EP ++
Sbjct: 470 VDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHS 529
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
G Y+LLSN+YA+ GRW D KVR +M+++G+KK G S +E+ +H F D +H + +
Sbjct: 530 GDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSE 589
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
IY +E++ ++K G+V +T D E++KE + +HSEKLA+A+G++ P G I
Sbjct: 590 EIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTI 649
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+ KNLRVC DCHNA K +SK+ R I++RD RFHHF GSCSC DYW
Sbjct: 650 RITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 198/450 (44%), Gaps = 58/450 (12%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGY 133
D A+ +F + S +YN MI G+ L A +F +M Q D ++ ++
Sbjct: 75 DYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVC 134
Query: 134 VRNKSLSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
R ++LS + ++ K S NT++ YA G + ARR+FD M E+N +WN
Sbjct: 135 SRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWN 194
Query: 190 GLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+ A Y ++G EE LF E ++ V+ S++ + L +WI + +
Sbjct: 195 SMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEK 254
Query: 246 DEVSWNTMITG----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
T+IT YA+ + A+RLF++ +DV W+AM+SGY Q + EA +F
Sbjct: 255 GLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLF 314
Query: 302 DAMPEKN----------TVSWNAMIAG---------YVQTKRMDMARELFEAMTCKNVAS 342
M + N +S A++ +++ KRM + L A
Sbjct: 315 HEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTA-------- 366
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
++ YA+ G + + +F +MP + +SW +I G A +G + +L F M
Sbjct: 367 ---LMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNV 423
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEA-----GCFVGNALLVMYCKCGS 456
N F VLS C++ ++ G+ L + + G E GC V + + G
Sbjct: 424 EPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVD-----ILGRAGL 478
Query: 457 VEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+EEA+ + + + + + W T++A H
Sbjct: 479 IEEAFQFIKNMPIQPNAVIWRTLLASCKVH 508
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 164/356 (46%), Gaps = 31/356 (8%)
Query: 71 HMRNGC--CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL----V 124
HM C + A VF+ M R+ ++N+M +GY +G + ++F +M + D+ V
Sbjct: 167 HMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEV 226
Query: 125 SWNVMISGYVRNKSLSAA----RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ +++ R L R + E K + +++ YA+ G D ARR+FD+M
Sbjct: 227 TLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQM 286
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFE--SKANWEV--VSWNSLMGGFVKQKRLGDAK 236
++ ++W+ +++ Y Q R EA LF KAN + ++ S++ L K
Sbjct: 287 DRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGK 346
Query: 237 WI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
W+ + ++ V+ T ++ YA+ + + +F + PVK+V +WT ++ G NG
Sbjct: 347 WVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNG 406
Query: 293 KVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASW 343
+ +A F M EKN V++ +++ +D R+LF +M+ + +
Sbjct: 407 QGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHY 466
Query: 344 NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFI 395
M+ ++G I A MP Q + + W ++A + E+SL+ I
Sbjct: 467 GCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLI 522
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 43/186 (23%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL---- 123
+ + + G D+A +F+ M RR V+++AMISGY + A +F +M + ++
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNE 326
Query: 124 ---VS---------------W-----------------NVMISGYVRNKSLSAARNLFEM 148
VS W ++ Y + S+ ++ +F
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGK 386
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA 204
MP ++V+SW ++ G A NG A F MLEK N++++ G+L+A G ++E
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEG 446
Query: 205 CMLFES 210
LF S
Sbjct: 447 RDLFVS 452
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 21/250 (8%)
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
A++ ++ S+ LF E +P T +L C + L ++H L+K
Sbjct: 10 AKTPTAKTSISLFPE----------NPKTLILEQCKTIRDL---NEIHAHLIKTRLLLKP 56
Query: 442 FVGNALL--VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
V LL S++ A F +I + D ++N MI G+ +A++LF+ M
Sbjct: 57 KVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMH 116
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
++PD+ T IL CS + +G E +++ G + ++ + G +
Sbjct: 117 ENSVQPDEFTFPCILKVCSRLQALSEG-EQIHALIMKCGFGSHGFVKNTLIHMYANCGEV 175
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-EPENAGMYVLLSNL 618
+ A+ + M E + TW ++ Y K+ E+ ++ EM E + V L ++
Sbjct: 176 EVARRVFDEMS-ERNVRTWNSMFAG---YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSV 231
Query: 619 YAASGRWGDV 628
A GR D+
Sbjct: 232 LTACGRLADL 241
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/536 (40%), Positives = 320/536 (59%), Gaps = 8/536 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA----RMIFDAMPE 306
+++T YA+ L AQR+F+E P +WTA+++ Y+ G + EA R F
Sbjct: 110 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR 169
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG----YAQSGEITHARNL 362
++ + ++ + + ++ A + +A + T Y + GE+ AR +
Sbjct: 170 PDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREV 229
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD+M D ++W A++ GYA +G+ ++L LF+ M+ G R + LS C L +L
Sbjct: 230 FDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL 289
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LG+Q + F +G AL+ MY KCGS EA+ F+++ KD+I WN MI G
Sbjct: 290 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGL 349
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
G K A L M+ G+K +D T +G+L +C+HTGL++ G YF++M + Y + P
Sbjct: 350 GMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 409
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY C+VDLL RAG L EA L+ +MP +A GALLG C+++ ELAE +
Sbjct: 410 IEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 469
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+EP N+G YV+LSN+Y+ GRW D +K+RL M+++GV+KV SW+E + KVH F VGD
Sbjct: 470 RLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGD 529
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP D+IY L+EL ++K G+ +T++V+ DV +EEKEH L +HSEKLA+A+ +L
Sbjct: 530 KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLV 589
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IRV KNLRVC DCH AIK IS+I R II+RDNNRFH F GSCSC DYW
Sbjct: 590 TGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 147/392 (37%), Gaps = 78/392 (19%)
Query: 34 PYPSKKTLKRHLNSKSR-NKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS 92
P PS T L S SR P AG+ + ++ + +H HV S+
Sbjct: 66 PNPSHLTFPIALKSASRLPHPLRAGE-QLHARSLKLPSHTNP-------HVLTSL----- 112
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY------------------- 133
++ Y G L A++VFD+MP VSW +I+ Y
Sbjct: 113 ------LTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFAN 166
Query: 134 -VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA-------------------A 173
+R S +A R L D+ + T+ Q G A + A
Sbjct: 167 GMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKA 226
Query: 174 RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKRL 232
R +FD+M +K+ ++W ++ Y NG EA LF + +A ++ G RL
Sbjct: 227 REVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRL 286
Query: 233 G--DAKWIFDRMPVRDE-----VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
G D RM DE V +I YA+ AEA +F++ KD+ W AM+
Sbjct: 287 GALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMI 346
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMIAGYVQTKRMDMARELFEAMT---- 336
G G A + M EK+ V N ++ T + R F MT
Sbjct: 347 LGLGMTGHEKTAFTLIGQM-EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYH 405
Query: 337 -CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ + ++ +++G + A L D MP
Sbjct: 406 ISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMP 437
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 13/243 (5%)
Query: 409 FTSVLSTCANLA-SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F L + + L L G+QLH + +K+ V +LL +Y +CG + A F+E+
Sbjct: 73 FPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEM 132
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+SW +I Y G ++A+ + + G++PD T V +L+AC+ + G
Sbjct: 133 PHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATG- 191
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
E + G+ + T VDL + G + +A+ + M + DA WGA++G
Sbjct: 192 ETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RDKDAVAWGAMVGG--- 247
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
Y +A ++ M+ E + + YA +G + RL D G + +
Sbjct: 248 YASNGHPREALDLFLAMQAEG-----VRPDCYAVAGALSACT--RLGALDLGRQAIRMVD 300
Query: 648 WLE 650
W E
Sbjct: 301 WDE 303
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 181/466 (38%), Gaps = 74/466 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
A + Y+ G++ AR+VFD+M +D V+W M+ GY N A +LF M +
Sbjct: 211 TAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 270
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLE-----KNEISWNGLLAAYVQNGRIEEACM 206
D + LS + G D R+ RM++ N + L+ Y + G EA +
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAI-RMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWV 329
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI--------TGY 257
+F+ +++ WN+++ G A + +M +++ NT I TG
Sbjct: 330 VFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGL 389
Query: 258 AQNN--YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNA 314
Q+ Y +L+ +P + + +V + G + EA + D MP N V A
Sbjct: 390 IQDGRRYFHNMTKLYHISP--RIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGA 447
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++ G + ++A + + + WN SG N+
Sbjct: 448 LLGGCKIHRNAELAEHVLTQLI--RLEPWN--------SGNYVMLSNI------------ 485
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-------KQ 427
Y+ G ED+ +L ++MK G + + P S + + +G Q
Sbjct: 486 ------YSNRGRWEDAAKLRLDMKEKG--VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 537
Query: 428 LHGQLVKVGFEAGC--FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
++ +L ++G E + +VM+ EE H +K I++N ++ G
Sbjct: 538 IYKKLDELGLEMKTMGYEPTTEVVMFDV--EDEEKEHTLVHHSEKLAIAFNLLVTGPGE- 594
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
K + + D T + ++S +H ++ + F+
Sbjct: 595 --------TIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFH 632
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/637 (36%), Positives = 354/637 (55%), Gaps = 23/637 (3%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSW 219
YA+N AA R+ D M + + WN ++A + G +++A L S V +W
Sbjct: 183 YAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATW 242
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL----FE 271
N+++ G + R +A + M + D + ++++ A L +
Sbjct: 243 NTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLR 302
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
DV+T TA+V Y + G++D A+ +FDA+ +N +WN+++AGY R D+A EL
Sbjct: 303 NQLEPDVYTGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALEL 362
Query: 332 FEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYA 382
E M KN + +WN +ITGY+ +G+ + A L ++ + +SW ++I+G
Sbjct: 363 VELMK-KNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSC 421
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
+G EDS EM++ G + + + +L CA LA + GK+LH ++ ++
Sbjct: 422 HNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMV 481
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
V AL+ MY K GS+ A FE I K+++ N M+ G A HG G++A+ LF M G
Sbjct: 482 VSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSG 541
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+KPD IT +L+AC GLV +G EYF M YGV P +++Y CMVDLL R G LDEA
Sbjct: 542 LKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEA 601
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ ++ P +P A+ WGALL C ++G LAE AA +F +EP N+ Y+L+ NLY
Sbjct: 602 MDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFRLEPYNSANYLLMMNLYEYE 661
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
+ + ++ M+ RGV G+SW++++ +H F V HPE IY L L F++
Sbjct: 662 RMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQI 721
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR-PIRVMKNLRVCEDC 741
K+ G+V T + ++V EEEKE +L H+EKLA+ YG++ A R P+RVMKN R+C DC
Sbjct: 722 KKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDC 781
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H KHIS + R IILRD RFHHF G CSC DYW
Sbjct: 782 HEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 818
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 192/461 (41%), Gaps = 63/461 (13%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPAR 112
G + WN + R G D AL + M P + ++N ++SG +G+ A
Sbjct: 200 GAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREAL 259
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAA------------RNLFEMMPKRDVVSWNTM 160
V M ++ L +S +++ + + RN E DV + +
Sbjct: 260 GVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLE----PDVYTGTAL 315
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
+ YA+ G D A+++FD + +N +WN L+A Y GR + A L E
Sbjct: 316 VDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVE----------- 364
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVK 276
+K+ RL D +WN +ITGY+ N ++A L +
Sbjct: 365 -----LMKKNRLDP-----------DITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTP 408
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELF 332
+V +WT+++SG NG+ +++ M + + V+ + ++ +EL
Sbjct: 409 NVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELH 468
Query: 333 -----EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A C V S +I Y++ G + A+ +F+ + Q + + A++ G A G
Sbjct: 469 CFALRRAYDCDMVVS-TALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQG 527
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNA 446
+++ LF +M G + + FT++L+ C ++ + G + G K G +
Sbjct: 528 REAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYAC 587
Query: 447 LLVMYCKCGSVEEAYHAFE-EIVDKDVISWNTMIAGYARHG 486
++ + +CG ++EA E +D W ++ G + HG
Sbjct: 588 MVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHG 628
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 162/419 (38%), Gaps = 104/419 (24%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSY------- 95
SR+ P+P ++ WN ++ R+G AL V SM P ++VS
Sbjct: 231 SRSGPEP----NVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVAN 286
Query: 96 --------------------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVM 129
A++ Y G+LD A++VFD + R+L +WN +
Sbjct: 287 TGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSL 346
Query: 130 ISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAA----RRIFDRML 181
++GY A L E+M K D+ +WN +++GY+ NG + A R+I +
Sbjct: 347 VAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGV 406
Query: 182 EKNEISWNGLLAAYVQNGRIEEA------------------------------------- 204
N +SW L++ NG E++
Sbjct: 407 TPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKE 466
Query: 205 --CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
C + ++V +L+ + K L AK IF+ + ++ V N M+TG A +
Sbjct: 467 LHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQ 526
Query: 263 LAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-----NTVSWN 313
EA LF + D T+TA+++ G V E FD M K T ++
Sbjct: 527 GREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYA 586
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEI----THARNLFDRMP 367
M+ + +D A + E AS W ++TG + G + ARNLF P
Sbjct: 587 CMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFRLEP 645
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 59/269 (21%)
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D + W +A A++ ++++ +F EM+ G R G+ +H
Sbjct: 120 DAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPRRR------------------GRAVH 161
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW-------------- 475
+K+ +A V L MY + V A + + V+ W
Sbjct: 162 AYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVD 221
Query: 476 ---------------------NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
NT+++G +RHG ++AL + SM G++PD T+ +L
Sbjct: 222 DALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLL 281
Query: 515 SACSHTGLVEKGTEY--FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+ ++TGL+ G E F+ N+ + P+ T +VD+ + GRLD AQ + +
Sbjct: 282 KSVANTGLLRHGMEIHCFFLRNQ---LEPDVYTGTALVDMYAKCGRLDCAQKVFDALEHR 338
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVI 601
+ TW +L+ G+ ++A + E++
Sbjct: 339 -NLTTWNSLVAGYANAGRFDIALELVELM 366
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 78/212 (36%), Gaps = 34/212 (16%)
Query: 409 FTSVLSTCANL--------ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG---SV 457
S+L CA+L + L QLH V+ G V AL+ + + G S
Sbjct: 47 LVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSC 106
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI---KPDDITMVGIL 514
H E KD + WN +A A +A+ +F M+ G+ + + +
Sbjct: 107 ARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPRRRGRAVHAYALK 166
Query: 515 SACSHTGLVEKGTEYFYSMNRDYG-------------VIPNSKHYTCMVDLLGRAGRLDE 561
A LV Y+ N D V+P + +V R G +D+
Sbjct: 167 LALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVP----WNAVVACCARLGLVDD 222
Query: 562 AQNLMKNMPF---EPDAATWGALLGACRLYGK 590
A L M EP+ ATW +L C +G+
Sbjct: 223 ALELAARMSRSGPEPNVATWNTVLSGCSRHGR 254
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/547 (40%), Positives = 324/547 (59%), Gaps = 36/547 (6%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ------ 321
R+F+ +D F +V+ Y + G ++A +FD MP K+ VSWN++I+G+ +
Sbjct: 64 RVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSL 123
Query: 322 ----TKRMDMARELFEAMTCKNVASWN--------------------------TMITGYA 351
T + +M+ + E +++ N ++I Y
Sbjct: 124 TAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGFGIKVGGTLEVKVANSLINMYG 183
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+SG++T A LF+ +P + +SW +IIA +G + + + F +M+R G + +
Sbjct: 184 KSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILA 243
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L C +L +L + +HG + GF A + ALL Y K G + +Y F E+ D
Sbjct: 244 LLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFAD 303
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
++W M+AGYA HG G++A+ LFESM G++PD +T +LSACSH+GLV +G YF
Sbjct: 304 RVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFN 363
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
M+ YG+ P HY+CMVDLLGR G L++A +++NMP EP+A WGALLGACR++G
Sbjct: 364 VMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNI 423
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
EL ++ AE + MEP + Y++LSN+Y+AS W D +KVR +++RG+K+ GYS +E
Sbjct: 424 ELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEY 483
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
NK H F VGD HPE ++IY+ LEEL K+++ G+ T+ VL DV EE KE M+ HS
Sbjct: 484 GNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHS 543
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EKLA+A+G+L G + + KNLR+C DCH+ K IS I R II+RD RFHHFS G
Sbjct: 544 EKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGF 603
Query: 772 CSCGDYW 778
CSC DYW
Sbjct: 604 CSCADYW 610
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 178/379 (46%), Gaps = 33/379 (8%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR--NKSLS 140
VF S+ R + +++ Y G + A ++FD MP +DLVSWN +ISG+ R + SL+
Sbjct: 65 VFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSLT 124
Query: 141 AARNL-FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN---EIS-WNGLLAAY 195
A + FEM K + V+ +M+S A NG DA + I ++ E+ N L+ Y
Sbjct: 125 AFYTMKFEMSVKPNEVTILSMIS--ACNGALDAGKYIHGFGIKVGGTLEVKVANSLINMY 182
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWN 251
++G + AC LFE+ + VSWNS++ V + F++M +DE +
Sbjct: 183 GKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTIL 242
Query: 252 TMITG--YAQNNYLAEAQR--LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
++ + LAE+ +F + TA++ Y + G++ + +F +
Sbjct: 243 ALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFA 302
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLF 363
+ V+W AM+AGY A +LFE+M K + ++ +++ + SG + ++ F
Sbjct: 303 DRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYF 362
Query: 364 DRM-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+ M P+ D ++ ++ + G D+ + M N + ++L C
Sbjct: 363 NVMSEVYGIEPRVD--HYSCMVDLLGRCGLLNDAYEVIQNMPM---EPNAGVWGALLGAC 417
Query: 417 ANLASLELGKQLHGQLVKV 435
++ELGK++ L+ +
Sbjct: 418 RVHGNIELGKEVAEHLINM 436
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 174/398 (43%), Gaps = 59/398 (14%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY------------------------- 102
+T + + G + AL +F+ MP + VS+N++ISG+
Sbjct: 81 VTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEV 140
Query: 103 -------LLNGQLDPARQV----FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
NG LD + + ++ N +I+ Y ++ L++A LFE +P
Sbjct: 141 TILSMISACNGALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPD 200
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA--YVQNGRIEEAC 205
+ VSWN++++ NG A F++M +E++E + LL A ++ G++ E+
Sbjct: 201 PNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESI 260
Query: 206 --MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
++F + ++ +L+ + K RL + +F + D V+W M+ GYA +
Sbjct: 261 HGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLG 320
Query: 264 AEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNA 314
EA +LFE K D T+T ++S +G V+E + F+ M E + ++
Sbjct: 321 REAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSC 380
Query: 315 MIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDR---MPQHD 370
M+ + ++ A E+ + M + N W ++ G I + + + M D
Sbjct: 381 MVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLD 440
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
++ + Y+ S +D+ ++ +K G L R+P
Sbjct: 441 PRNYIMLSNMYSASRSWKDAAKVRALLKERG--LKRTP 476
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 77/330 (23%)
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYL---AEAQRLFEEAPVKDVFTWTAMVSG--- 287
DA +FD MP +D VSWN++I+G+++ ++ A FE + + T +M+S
Sbjct: 92 DALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACNG 151
Query: 288 ------------------------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
Y ++G + A +F+A+P+ NTVSWN++IA
Sbjct: 152 ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211
Query: 318 GYV-------------QTKRM----------------------DMARELFEAMTCKNVAS 342
V + +R+ +A + M C +
Sbjct: 212 AQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGA 271
Query: 343 WNTMITG----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
T+ T YA+ G ++ + +F + D ++W A++AGYA G ++++LF M
Sbjct: 272 KITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMA 331
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSV 457
G + FT +LS C++ + GK + +V G E + ++ + +CG +
Sbjct: 332 NKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLL 391
Query: 458 EEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
+AY + + ++ + W ++ HG
Sbjct: 392 NDAYEVIQNMPMEPNAGVWGALLGACRVHG 421
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 99/176 (56%), Gaps = 7/176 (3%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+++L + S+ +++H ++ K F+G+ L+ Y K G E+A F+++
Sbjct: 43 SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH 102
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMK-TVGIKPDDITMVGILSACSHTGLVEKGTE 528
KD++SWN++I+G++R +L F +MK + +KP+++T++ ++SAC+ G ++ G +
Sbjct: 103 KDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAG-K 157
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
Y + G K ++++ G++G L A L + +P +P+ +W +++ A
Sbjct: 158 YIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/741 (34%), Positives = 386/741 (52%), Gaps = 41/741 (5%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
R C LH + +V +N ++ + D A VF +M R V G
Sbjct: 102 RGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQAR-----GVPADG 156
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLS-------------GYAQNGYADAARRIFDR 179
Y + L A + R V ++ L+ YA+N AA R+ D
Sbjct: 157 YTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDA 216
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDA 235
M + + WN ++A + G +++A L S V +WN+++ G + R +A
Sbjct: 217 MGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREA 276
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSG 287
+ M + D + ++++ A L + DV+T TA+V
Sbjct: 277 LGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDM 336
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VAS 342
Y + G++D A+ + DA+ +N +WN+++AGY R D+A EL E M KN + +
Sbjct: 337 YAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMK-KNRLDPDITT 395
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
WN +ITGY+ +G+ + A L ++ + +SW ++I+G +G EDS EM+
Sbjct: 396 WNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQ 455
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ G + + + +L CA LA + GK+LH ++ ++ V AL+ MY K GS+
Sbjct: 456 KDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLV 515
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A FE I K+++ N M+ G A HG G++A+ LF M G+KPD IT +L+AC
Sbjct: 516 SAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACR 575
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
GLV +G EYF SM YGV P +++Y CMVDLL R G LDEA + ++ P +P A+ W
Sbjct: 576 SMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHW 635
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
GALL C ++G LAE AA +F +EP N+ Y+L+ NLY + + ++ M+ R
Sbjct: 636 GALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKAR 695
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
GV G+SW++++ +H F V HPE IY L L F++K+ G+V T + ++V
Sbjct: 696 GVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNV 755
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGR-PIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
EEEKE +L H+EKLA+ YG++ A R P+RVMKN R+C DCH KHIS + R II
Sbjct: 756 QEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQII 815
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
LRD RFHHF G CSC DYW
Sbjct: 816 LRDAVRFHHFVDGKCSCNDYW 836
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 27/311 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQ 113
D DI WN IT + NG A+ + + + VS+ ++ISG NG+ + +
Sbjct: 390 DPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFY 449
Query: 114 VFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYA 165
+M Q LV+ +V++ + L +R D+V ++ Y+
Sbjct: 450 FCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYS 509
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNS 221
+ G +A+ IF+ + +KN + N +L +G+ EA LF S + +++ +
Sbjct: 510 KGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTA 569
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEAPVK 276
L+ + + FD M + V T M+ A+ YL EA E +P+
Sbjct: 570 LLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPID 629
Query: 277 DVFT-WTAMVSGYVQNGKVD----EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+ W A+++G +G + AR +F P N+ ++ M+ Y + D A L
Sbjct: 630 PGASHWGALLTGCSIHGNLALAEVAARNLFILEP-YNSANYLLMMNLYEYERMYDEAESL 688
Query: 332 FEAMTCKNVAS 342
AM + V S
Sbjct: 689 KYAMKARGVDS 699
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/503 (42%), Positives = 309/503 (61%), Gaps = 2/503 (0%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+F T ++S Y + G AR +FD M E N V+WNA++ + ++ A+++F M
Sbjct: 138 IFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPV 197
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+N+ SWN M+ GYA++GE+ AR +F MP D +SW+ +I G+A +G +++ F E+
Sbjct: 198 RNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFREL 257
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
R R N T VLS CA + E GK LHG + K GF V NAL+ Y KCG+V
Sbjct: 258 LREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNV 317
Query: 458 EEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
A F+ + V + ++SW ++IAG A HG G++A+ LF M+ G++PD IT + +L A
Sbjct: 318 AMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYA 377
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH+GLVE+G F M YG+ P +HY CMVDL GRA RL +A + MP P+A
Sbjct: 378 CSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAI 437
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W LLGAC ++G E+AE + EM+P+N+G +VLLSN+YA +G+W DVS +R M
Sbjct: 438 IWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMT 497
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD-GFVYSTKLVL 695
+ +KK G+S +E+ ++ F G+ + + + L E+ +L+ + G+ + VL
Sbjct: 498 EHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVL 557
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRL 755
HD+ EEEKE + HSEKLA A+GI +P GR +R++KNLRVC DCH +K ISK+
Sbjct: 558 HDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVE 617
Query: 756 IILRDNNRFHHFSGGSCSCGDYW 778
II+RD +RFH F G CSC DYW
Sbjct: 618 IIVRDRSRFHSFKDGFCSCRDYW 640
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 198/420 (47%), Gaps = 37/420 (8%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
AL +F+ P + +N +I L+ + F Q+ ++ +S + + K++
Sbjct: 55 ALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFAL-KAV 113
Query: 140 SAARNL----------FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
+ +R+L F + T++S YA+ G + +ARR+FD M E N ++WN
Sbjct: 114 ANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWN 173
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
+L A + G +E A +F + SWN ++ G+ K LG A+ +F MP+RDEVS
Sbjct: 174 AVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVS 233
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
W+TMI G+A N EA F E +++ T ++G + A +
Sbjct: 234 WSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTG------------VLSACAQAGA 281
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-Q 368
+ ++ G+V+ + F + N N +I Y++ G + AR +F MP
Sbjct: 282 FEFGKILHGFVE-------KAGFLYVGSVN----NALIDTYSKCGNVAMARLVFQNMPVA 330
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+SW +IIAG A G E++++LF EM+ G R + F S+L C++ +E G L
Sbjct: 331 RSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGL 390
Query: 429 HGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++ + G E ++ +Y + +++AY E+ V + I W T++ + HG
Sbjct: 391 FSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHG 450
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 161/332 (48%), Gaps = 19/332 (5%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D I I+ + G SA VF+ M + V++NA+++ G ++ A+ VF
Sbjct: 135 DAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGC 194
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
MP R+L SWN M++GY + L AR +F MP RD VSW+TM+ G+A NG D A F
Sbjct: 195 MPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFF 254
Query: 178 DRMLEK----NEISWNGLLAAYVQNGRIEEACML--FESKANWEVVSW--NSLMGGFVKQ 229
+L + NE+S G+L+A Q G E +L F KA + V N+L+ + K
Sbjct: 255 RELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKC 314
Query: 230 KRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAM 284
+ A+ +F MPV R VSW ++I G A + EA +LF EE+ V+ D T+ ++
Sbjct: 315 GNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISL 374
Query: 285 VSGYVQNGKVDEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMARELF-EAMTCK 338
+ +G V+E +F M E + M+ Y + R+ A E E
Sbjct: 375 LYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSP 434
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
N W T++ + G I A + R+ + D
Sbjct: 435 NAIIWRTLLGACSIHGNIEMAELVKARLAEMD 466
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 129/338 (38%), Gaps = 75/338 (22%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP---- 408
S + +A LF P D +I + S SL FI+++R + SP
Sbjct: 49 SDALHYALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRR---QPTLSPDSFT 105
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F L AN L G QLH Q + GF+A FVG L+ MY +CG A F+E+
Sbjct: 106 FAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMS 165
Query: 469 DKDVI-------------------------------SWNTMIAGYAR------------- 484
+ +V+ SWN M+AGYA+
Sbjct: 166 EPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYE 225
Query: 485 ------------------HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+G +A F + I+ +++++ G+LSAC+ G E G
Sbjct: 226 MPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFG 285
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ + G + ++D + G + A+ + +NMP +W +++
Sbjct: 286 -KILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLA 344
Query: 587 LYGKTELAEKAAEVIFEMEPENA--GMYVLLSNLYAAS 622
++G E+A ++ EME +S LYA S
Sbjct: 345 MHG---CGEEAIQLFHEMEESGVRPDGITFISLLYACS 379
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 15/234 (6%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH----AFE 465
S+LS C+ SL+ KQ+H Q+ K G V LL ++C ++ +A H F
Sbjct: 6 VSLLSKCS---SLKPTKQIHAQICKTGLHTDPLVFGKLL-LHCAI-TISDALHYALRLFH 60
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVE 524
+ D NT+I + +L F + + + PD T L A +++ +
Sbjct: 61 HFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLR 120
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + +S +G + T ++ + G A+ + M EP+ TW A+L A
Sbjct: 121 PGIQ-LHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMS-EPNVVTWNAVLTA 178
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
G E A+ +V M N + + YA +G G +V +M R
Sbjct: 179 AFRCGDVEGAQ---DVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLR 229
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/646 (37%), Positives = 358/646 (55%), Gaps = 61/646 (9%)
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
+N L+ Y + R A +L N VV+W +L+ G V+ R A + F M RD
Sbjct: 45 YNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMR-RDS 103
Query: 248 VSWN--TMITGYAQNNYL------AEAQRLFEEA-PVKDVFTWTAMVSGYVQNGKVDEAR 298
+ N T + + L + L +A + DVF + Y + G +EAR
Sbjct: 104 IQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEAR 163
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMD-------------------------------- 326
+FD MPE+N +WNA ++ V R D
Sbjct: 164 KMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGAS 223
Query: 327 ---MAREL--------FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
+ R+L FEA +V+ N +I Y + ++ + +F + + + +SW
Sbjct: 224 YLRLGRQLHGFVLQSGFEA----DVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWC 279
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++I Y Q+ E + +F+ ++ G +SVLS CA L+ LE+GK +H VK
Sbjct: 280 SMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKA 339
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
FVG+AL+ MY KCGS+E+A AF+E+ ++++++WN MI GYA G A+ LF
Sbjct: 340 CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLF 399
Query: 496 ESMKTVG---IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+ M T G + P+ +T V +LSACS G V G E F SM YG+ P ++HY C+VDL
Sbjct: 400 DEM-TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDL 458
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG +++A +K MP P + WGALLGA +++GK+EL + AA+ +FE++P ++G +
Sbjct: 459 LGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNH 518
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSN++AA+GRW + + VR +M+D G+KK G SW+ N VH F DT H I
Sbjct: 519 VLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQ 578
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
A L +L +++ G++ T L D+ EEEK + YHSEK+A+A+G++SIPAG PIR+
Sbjct: 579 AMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRIT 638
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLR+C DCH+AIK IS IVGR II+RDNN FH F CSC DYW
Sbjct: 639 KNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 183/402 (45%), Gaps = 44/402 (10%)
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--- 335
F + +V+ Y + + + A+++ P ++ V+W A+IAG VQ R A F M
Sbjct: 43 FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRD 102
Query: 336 ---------TC--KNVASWNTMITG-------------------------YAQSGEITHA 359
C K S + + G Y+++G A
Sbjct: 103 SIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEA 162
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R +FD MP+ + +W A ++ G +D+L FIE + G N F + L+ CA
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGA 222
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+ L LG+QLHG +++ GFEA V N L+ Y KC V + F I + +SW +MI
Sbjct: 223 SYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMI 282
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
Y ++ + A ++F + GI+P D + +LSAC+ ++E G + +++ V
Sbjct: 283 VSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVG-KSVHTLAVKACV 341
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+ N + +VD+ G+ G +++A+ MP E + TW A++G G+ ++A +
Sbjct: 342 VGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNAMIGGYAHQGQADMAVTLFD 400
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVS---KVRLKMRDR 638
+ A YV + +A R G V+ ++ MR R
Sbjct: 401 EMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGR 442
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 207/516 (40%), Gaps = 116/516 (22%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN-------VMI 130
+SA + + P RS V++ A+I+G + NG+ A F M +RD + N
Sbjct: 59 NSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNM-RRDSIQPNDFTFPCAFKA 117
Query: 131 SGYVRNKSLSAARNLFEMMPKR--DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
SG +R+ + + + + DV + Y++ G + AR++FD M E+N +W
Sbjct: 118 SGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATW 177
Query: 189 NGLLAAYVQNGRIEEA-------------------CMLFESKANWEVVSWNSLMGGFVKQ 229
N L+ V GR ++A C + A + + GFV Q
Sbjct: 178 NAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQ 237
Query: 230 K--------------------RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
++G ++ IF + ++VSW +MI Y QN+ +A +
Sbjct: 238 SGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLV 297
Query: 270 FEEA---------------------------------------PVKDVFTWTAMVSGYVQ 290
F A V ++F +A+V Y +
Sbjct: 298 FLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGK 357
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC------KNVASWN 344
G +++A FD MPE+N V+WNAMI GY + DMA LF+ MTC N ++
Sbjct: 358 CGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFV 417
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKR 399
+++ +++G + +F+ M I +A ++ ++G E + + +K+
Sbjct: 418 CVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQF---IKK 474
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF-VGNALLV--MYCKCGS 456
R S + ++L ELGK L FE GN +L+ M+ G
Sbjct: 475 MPIRPTVSVWGALLGASKMFGKSELGKVAADNL----FELDPLDSGNHVLLSNMFAAAGR 530
Query: 457 VEEAYHAFEEIVDKDV-----ISWNTMIAGYARHGF 487
EEA +E+ D + SW T AG A H F
Sbjct: 531 WEEATLVRKEMKDVGIKKGAGCSWIT--AGNAVHVF 564
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 153/351 (43%), Gaps = 30/351 (8%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRD 122
A + + G + A +F+ MP R+ ++NA +S +L G+ D A F + + +
Sbjct: 149 AFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPN 208
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFD 178
L+++ ++ L R L + + DV N ++ Y + + IF
Sbjct: 209 LITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFS 268
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLG----D 234
+ + N++SW ++ +YVQN E+AC++F +A E + M V G +
Sbjct: 269 GISKPNDVSWCSMIVSYVQNDEEEKACLVF-LRARKEGIEPTDFMVSSVLSACAGLSVLE 327
Query: 235 AKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
+ V+ V N ++ Y + + +A+R F+E P +++ TW AM+ GY
Sbjct: 328 VGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYA 387
Query: 290 QNGKVDEARMIFDAMP------EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----- 338
G+ D A +FD M N V++ +++ + +++ E+FE+M +
Sbjct: 388 HQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEP 447
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAGYAQSGYSE 388
+ ++ ++G + A +MP +S W A++ G SE
Sbjct: 448 GAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 498
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 12/246 (4%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYH 462
L+ + S++ + + LG+ H Q++K + F+ N L+ MY K A
Sbjct: 4 LSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS--HT 520
++ V++W +IAG ++G AL F +M+ I+P+D T A +
Sbjct: 64 LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRS 123
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
LV K +++ G I + D+ +AG +EA+ + MP E + ATW A
Sbjct: 124 PLVGKQV---HALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNIATWNA 179
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
L L G+ + A A + F E + + L A +G S +RL + G
Sbjct: 180 YLSNSVLEGRYDDA-LTAFIEFRHEGWEPNLITFCAFLNACAG----ASYLRLGRQLHGF 234
Query: 641 KKVTGY 646
+G+
Sbjct: 235 VLQSGF 240
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 334/541 (61%), Gaps = 8/541 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + ++++ Y+ + L +A +LF+E P + V TWTA+ SGY +G+ EA +F M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 306 E----KNTVSWNAMIAGYVQTKRMD----MARELFEAMTCKNVASWNTMITGYAQSGEIT 357
E ++ +++ V +D + + + E KN T++ YA+ G++
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR++FD M + D ++W+ +I GYA + + ++ + LF++M + + ++ LS+CA
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+L +L+LG+ + + F F+ NAL+ MY KCG++ + F+E+ +KD++ N
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
I+G A++G K + +F + +GI PD T +G+L C H GL++ G +F +++ Y
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ +HY CMVDL GRAG LD+A L+ +MP P+A WGALL CRL T+LAE
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
+ + +EP NAG YV LSN+Y+ GRW + ++VR M +G+KK+ GYSW+E++ KVH
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHE 564
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP D+IYA LE+L +++ GFV +T+ V DV EEEKE +L YHSEKLAVA
Sbjct: 565 FLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVA 624
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
G++S G+ IRV+KNLRVC DCH +K ISKI R I++RDNNRFH F+ GSCSC DY
Sbjct: 625 LGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDY 684
Query: 778 W 778
W
Sbjct: 685 W 685
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF + + ++I G+ + ++L LF+ ++++G L+ F VL C +S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+LG LH +VK GF +LL +Y G + +A+ F+EI D+ V++W + +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y G ++A+ LF+ M +G+KPD +V +LSAC H G ++ G E+ + +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG-EWIVKYMEEMEMQK 245
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
NS T +V+L + G++++A+++ +M E D TW ++ Y ++ E+
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG---YASNSFPKEGIELF 301
Query: 602 FEMEPEN 608
+M EN
Sbjct: 302 LQMLQEN 308
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 84/376 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ ++ + +G + A +F+ +P RS V++ A+ SGY +G+ A +F +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 120 QR--------------------DLVS--WNV-----------------MISGYVRNKSLS 140
+ DL S W V +++ Y + +
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYV 196
AR++F+ M ++D+V+W+TM+ GYA N + +F +ML++N + S G L++
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMIT 255
G ++ W + + DR + + N +I
Sbjct: 325 SLGALD--------LGEWGIS--------------------LIDRHEFLTNLFMANALID 356
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---- 311
YA+ +A +F+E KD+ A +SG +NG V + +F EK +S
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF-GQTEKLGISPDGS 415
Query: 312 -WNAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDR 365
+ ++ G V + F A++C + V + M+ + ++G + A L
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 366 MPQH-DCISWAAIIAG 380
MP + I W A+++G
Sbjct: 476 MPMRPNAIVWGALLSG 491
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/436 (47%), Positives = 298/436 (68%), Gaps = 1/436 (0%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N+++ YA G++ A +FD+MP+ D ++W ++I G+A++G E++L L+ EM G +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ S+LS CA + +L LGK++H ++KVG N LL +Y +CG VEEA
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK-TVGIKPDDITMVGILSACSHTGL 522
F+E+VDK+ +SW ++I G A +GFGK+A+ LF+ M+ T G+ P +IT VGIL ACSH G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V++G EYF M +Y + P +H+ CMVDLL RAG++ +A +K+MP +P+ W LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
GAC ++G ++LAE A I ++EP ++G YVLLSN+YA+ RW DV K+R +M GVKK
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
V G+S +EV N+VH F +GD HP+ D IYA L+E+ +L+ +G+V V DV EEE
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE+ + YHSEK+A+A+ ++S P PI V+KNLRVC DCH AIK +SK+ R I++RD +
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF GSCSC DYW
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+A + LG+ +H +++ GF + +V N+LL +Y CG V AY F+++ +KD+++WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I G+A +G ++AL L+ M + GIKPD T+V +LSAC+ G + G M + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ N ++DL R GR++EA+ L M + ++ +W +L+ + G ++A
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEAI 175
Query: 599 EVIFEME 605
E+ ME
Sbjct: 176 ELFKYME 182
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 49/285 (17%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
N+++ YA +A A ++F++ P KD+ W ++++G+ +NGK +EA ++ M K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 308 -------NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
+ +S A I KR+ + + + +N+ S N ++ YA+ G + A+
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVY--MIKVGLTRNLHSSNVLLDLYARCGRVEEAK 144
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN-RSPFTSVLSTCANL 419
LFD M + +SW ++I G A +G+ ++++ LF M+ L F +L C+
Sbjct: 145 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-- 202
Query: 420 ASLELGKQLHGQLVKVGFEA-----------------GCFVGNALLVMYCKCGSVEEAYH 462
H +VK GFE GC V + + G V++AY
Sbjct: 203 ---------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD-----LLARAGQVKKAYE 248
Query: 463 AFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+ + + +V+ W T++ H G L F ++ + ++P+
Sbjct: 249 YIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPN 291
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 19/252 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
N+++ Y G + A +VFD+MP++DLV+WN +I+G+ N A L+ M K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
D + ++LS A+ G +R+ M L +N S N LL Y + GR+EEA L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-----EVSWNTMITGYAQNNY 262
F+ + VSW SL+ G +A +F M + E+++ ++ +
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 263 LAEA----QRLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMI 316
+ E +R+ EE ++ + + MV + G+V +A +MP + N V W ++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 317 AGYVQTKRMDMA 328
D+A
Sbjct: 267 GACTVHGDSDLA 278
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 145/328 (44%), Gaps = 26/328 (7%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LE 182
N ++ Y +++A +F+ MP++D+V+WN++++G+A+NG + A ++ M ++
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 183 KNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ + LL+A + G + + + + S N L+ + + R+ +AK +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE-----EAPVKDVFTWTAMVSGYVQNGK 293
FD M ++ VSW ++I G A N + EA LF+ E + T+ ++ G
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 294 VDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
V E F M E+ + + M+ + ++ A E ++M + NV W T++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 348 ---TGYAQSGEITHAR-NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
T + S AR + P H + + YA D ++ +M R G
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSG-DYVLLSNMYASEQRWSDVQKIRKQMLRDG-- 323
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ + P S++ + +G + H Q
Sbjct: 324 VKKVPGHSLVEVGNRVHEFLMGDKSHPQ 351
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLV 124
H+ C D SA VF+ MP + V++N++I+G+ NG+ + A ++ +M + D
Sbjct: 31 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 90
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ ++S + +L+ + + M K R++ S N +L YA+ G + A+ +FD M
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
++KN +SW L+ NG +EA LF+
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN I NG + AL ++ M + + +++S G L ++V
Sbjct: 53 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 112
Query: 116 DQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
M + R+L S NV++ Y R + A+ LF+ M ++ VSW +++ G A NG+
Sbjct: 113 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 172
Query: 172 AARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNS 221
A +F M L EI++ G+L A G ++E F E K + +
Sbjct: 173 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 232
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMI 254
++ + ++ A MP++ V W T++
Sbjct: 233 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 263/726 (36%), Positives = 378/726 (52%), Gaps = 98/726 (13%)
Query: 139 LSAARNLFE-MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
L RNL + + +RD+++ T+ + Y F ++ + N Y +
Sbjct: 9 LQTFRNLLKACIAQRDLITGKTLHALY------------FKSLIPPSTYLSNHFTLLYSK 56
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
G + A F+ V S+N+L+ + K + A+ +FD +P D VS+NT+I Y
Sbjct: 57 CGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAY 116
Query: 258 AQNNYLAEAQRLFEEAPVK----DVFTWT------------------------------- 282
A A RLF E D FT +
Sbjct: 117 ADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASV 176
Query: 283 --AMVSGYVQNGKVDEARMIFDAMPE---KNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
A+++ Y + G ++EAR +F M E ++ VSWNAMI Q + A ELF M
Sbjct: 177 NNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVR 236
Query: 336 -----------------TC--------------------KNVASWNTMITGYAQ-SGEIT 357
TC N + +I Y++ +G +
Sbjct: 237 RGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMV 296
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQ-SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
R +F+ + D + W +I+G++Q SED + F EM+ G + F V S C
Sbjct: 297 ECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSAC 356
Query: 417 ANLASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
+NL+S +GKQ+H +K V NAL+ MY KCG+V +A F+ + + +++S
Sbjct: 357 SNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSL 416
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N+MIAGYA+HG ++L LFE M I P+ IT + +LSAC HTG VE+G +YF M
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+ + P ++HY+CM+DLLGRAG+L EA+ +++ MPF P + W LLGACR +G ELA
Sbjct: 477 RFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAV 536
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
KAA ++EP NA YV+LSN+YA++ RW + + V+ MR+RGVKK G SW+E+ KV
Sbjct: 537 KAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKV 596
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL---HDVGEEEKEHMLRYHSE 712
H F DT HP I+ Y+ E+ K+KQ G+V + L +V +EKE L YHSE
Sbjct: 597 HVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSE 656
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLAVA+G++S PI V+KNLR+C DCHNAIK IS I GR I +RD +RFH F G C
Sbjct: 657 KLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHC 716
Query: 773 SCGDYW 778
SCGDYW
Sbjct: 717 SCGDYW 722
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 216/497 (43%), Gaps = 96/497 (19%)
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
F S+ S+ N Y G L A+ FD ++ S+N +I+ Y ++ + AR
Sbjct: 36 FKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLAR 95
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNG 199
+F+ +P+ D+VS+NT+++ YA G A R+F + E + + +G++ A +
Sbjct: 96 QVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDV 155
Query: 200 RIEEACMLFESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPV---RDEVSWNTMI 254
+ F ++ + N+++ + ++ L +A+ +F M RDEVSWN MI
Sbjct: 156 GLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMI 215
Query: 255 TGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGY---------------------- 288
Q+ EA LF E + D+FT ++++ +
Sbjct: 216 VACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFH 275
Query: 289 ----VQNGKVD----------EARMIFDAMPEKNTVSWNAMIAGYVQTKRMD-----MAR 329
V +G +D E R +F+ + + V WN MI+G+ Q + + R
Sbjct: 276 GNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFR 335
Query: 330 EL-----------FEAMT--CKNVASW-----------------------NTMITGYAQS 353
E+ F +T C N++S N ++ Y++
Sbjct: 336 EMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKC 395
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + AR +FD MP+H+ +S ++IAGYAQ G +SLRLF M + N F +VL
Sbjct: 396 GNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVL 455
Query: 414 STCANLASLELGKQLHGQL---VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VD 469
S C + +E G++ + ++ EA + + ++ + + G ++EA E + +
Sbjct: 456 SACVHTGKVEEGQKYFNMMKERFRIEPEAEHY--SCMIDLLGRAGKLKEAERIIETMPFN 513
Query: 470 KDVISWNTMIAGYARHG 486
I W T++ +HG
Sbjct: 514 PGSIEWATLLGACRKHG 530
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 183/465 (39%), Gaps = 103/465 (22%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRH---LNSKSRNKPKPAGDWDIRQ 63
R L +CI + + L + + P L H L SK + +D+ Q
Sbjct: 12 FRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQ 71
Query: 64 W------NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
+ N I + ++ A VF+ +P+ VSYN +I+ Y G+ PA ++F +
Sbjct: 72 YPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAE 131
Query: 118 MPQRDLVSWNVMISGYV----RNKSLSAARNLFEMMPKRDVVSW--NTMLSGYAQNGYAD 171
+ + +SG + + L + F ++ D + N +L+ Y++ G+ +
Sbjct: 132 VRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191
Query: 172 AARRIFDRMLE---KNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVSWNSLMG 224
ARR+F M E ++E+SWN ++ A Q+ EA LF ++ + S++
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251
Query: 225 GFVKQKRL------------------------------------GDAKWIFDRMPVRDEV 248
F K L + + +F+ + D V
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLV 311
Query: 249 SWNTMITGYAQNNYLAE-----------------------------------------AQ 267
WNTMI+G++Q L+E A
Sbjct: 312 LWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHAL 371
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ + P V A+V+ Y + G V +AR +FD MPE N VS N+MIAGY Q
Sbjct: 372 AIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVE 431
Query: 328 ARELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQ 368
+ LFE M K++A ++ +++ +G++ + F+ M +
Sbjct: 432 SLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
AL + + +P NA+++ Y G + AR+VFD MP+ ++VS N MI+GY ++
Sbjct: 370 ALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVE 429
Query: 140 SAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNG 190
+ LFE+M ++D+ +++ +LS G + ++ F+ M E+ I ++
Sbjct: 430 VESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSC 489
Query: 191 LLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGGFVKQ 229
++ + G+++EA + E+ N + W +L+G K
Sbjct: 490 MIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKH 529
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 41/235 (17%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L F ++L C L GK LH K ++ N ++Y KCGS+ A +
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 464 FEEIVDKDVISWNTMIAGYARH-------------------------------GFGKDAL 492
F+ +V S+NT+I YA+H G + AL
Sbjct: 67 FDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPAL 126
Query: 493 MLFESMKTVGIKPDDITMVGILSAC-SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
LF ++ + D T+ G++ AC GLV + + D N+ C
Sbjct: 127 RLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLAC--- 183
Query: 552 LLGRAGRLDEAQNLMKNMPFEP--DAATWGALLGACRLYGKTELAEKAAEVIFEM 604
R G L+EA+ + + M D +W A++ AC G+ +A E+ EM
Sbjct: 184 -YSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVAC---GQHREGLEAVELFREM 234
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N + + + G A VF++MP + VS N+MI+GY +G + ++F+ M Q+D+
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIA 445
Query: 124 ---VSWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAARR 175
+++ ++S V + + F MM +R + ++ M+ + G A R
Sbjct: 446 PNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAER 505
Query: 176 IFDRM-LEKNEISWNGLLAAYVQNGRIEEA 204
I + M I W LL A ++G +E A
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHGNVELA 535
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/741 (34%), Positives = 386/741 (52%), Gaps = 41/741 (5%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
R C LH + +V +N ++ + D A VF +M R V G
Sbjct: 102 RGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQAR-----GVPADG 156
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLS-------------GYAQNGYADAARRIFDR 179
Y + L A + R V ++ L+ YA+N AA R+ D
Sbjct: 157 YTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDA 216
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDA 235
M + + WN ++A + G +++A L S V +WN+++ G + R +A
Sbjct: 217 MGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREA 276
Query: 236 KWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSG 287
+ M + D + ++++ A L + DV+T TA+V
Sbjct: 277 LGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDM 336
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VAS 342
Y + G++D A+ + DA+ +N +WN+++AGY R D+A EL E M KN + +
Sbjct: 337 YAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMK-KNRLDPDITT 395
Query: 343 WNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
WN +ITGY+ +G+ + A L ++ + +SW ++I+G +G EDS EM+
Sbjct: 396 WNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQ 455
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ G + + + +L CA LA + GK+LH ++ ++ V AL+ MY K GS+
Sbjct: 456 KDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLV 515
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A FE I K+++ N M+ G A HG G++A+ LF M G+KPD IT +L+AC
Sbjct: 516 SAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACR 575
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
GLV +G EYF SM YGV P +++Y CMVDLL R G LDEA + ++ P +P A+ W
Sbjct: 576 SMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHW 635
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
GALL C ++G LAE AA +F +EP N+ Y+L+ NLY + + ++ M+ R
Sbjct: 636 GALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKAR 695
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
GV G+SW++++ +H F V HPE IY L L F++K+ G+V T + ++V
Sbjct: 696 GVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNV 755
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGR-PIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
EEEKE +L H+EKLA+ YG++ A R P+RVMKN R+C DCH KHIS + R II
Sbjct: 756 QEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQII 815
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
LRD RFHHF G CSC DYW
Sbjct: 816 LRDAVRFHHFVDGKCSCNDYW 836
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 27/311 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQ 113
D DI WN IT + NG A+ + + + VS+ ++ISG NG+ + +
Sbjct: 390 DPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFY 449
Query: 114 VFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYA 165
+M Q LV+ +V++ + L +R D+V ++ Y+
Sbjct: 450 FCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYS 509
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNS 221
+ G +A+ IF+ + +KN + N +L +G+ EA LF S + +++ +
Sbjct: 510 KGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTA 569
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEAPVK 276
L+ + + FD M + V T M+ A+ YL EA E +P+
Sbjct: 570 LLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPID 629
Query: 277 DVFT-WTAMVSGYVQNGKVD----EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+ W A+++G +G + AR +F P N+ ++ M+ Y + D A L
Sbjct: 630 PGASHWGALLTGCSIHGNLALAEVAARNLFILEP-YNSANYLLMMNLYEYERMYDEAESL 688
Query: 332 FEAMTCKNVAS 342
AM + V S
Sbjct: 689 KYAMKARGVDS 699
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/719 (34%), Positives = 389/719 (54%), Gaps = 86/719 (11%)
Query: 96 NAMISGYLLN-----GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
N+ + G +L+ G++D AR+ F+++ +D+ WN+M+SGY A M
Sbjct: 224 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMK 283
Query: 151 ----KRDVVSWNTMLSGYAQNGYADAARRIFDRM-----LEKNEISWNGLLAAYVQNGRI 201
K D V+WN ++SGYAQ+G + A + F M + N +SW L+A QNG
Sbjct: 284 LSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343
Query: 202 EEACMLFE----------------------------------------SKANWEVVSWNS 221
EA +F + + +++ NS
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----D 277
L+ + K + + A+ F + D VSWN M+ GYA EA L E + D
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFE 333
+ TW +V+G+ Q G A F M + NT + + +A Q + + + +E+
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEI-H 522
Query: 334 AMTCKNVASWNT-----MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+N +T +I+ Y+ + A ++F + D + W +II+ AQSG S
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSV 582
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++L L EM +N S L C+ LA+L GK++H +++ G + F+ N+L+
Sbjct: 583 NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLI 642
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY +CGS++++ F+ + +D++SWN MI+ Y HGFG DA+ LF+ +T+G+KP+ I
Sbjct: 643 DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHI 702
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T +LSACSH+GL+E+G +YF M +Y + P + Y CMVDLL RAG+ +E ++
Sbjct: 703 TFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEK 762
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MPFEP+AA WG+LLGACR++ +LAE AA +FE+EP+++G YVL++N+Y+A+GRW D
Sbjct: 763 MPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDA 822
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+K+R M++RGV K G SW+EV+ K+H+F VGDT HP ++I +DG
Sbjct: 823 AKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISG----------KDG-- 870
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
KL DV E+EKE L HSEK+A+A+G++S G P+R++KNLRV I+H
Sbjct: 871 ---KL---DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRVSVSNLIGIQH 923
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/553 (25%), Positives = 251/553 (45%), Gaps = 63/553 (11%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRD 153
++ Y G ++ AR++FD+M +R++ SW ++ Y LF +M + D
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 189
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFE 209
+ + ++ + ++D ML E N +L +++ GR++ A FE
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAE 265
+V WN ++ G+ + A M + D+V+WN +I+GYAQ+ E
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309
Query: 266 AQRLF-EEAPVKD----VFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVS--- 311
A + F E +KD V +WTA+++G QNG EA +F M P T++
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAV 369
Query: 312 -------------------------------WNAMIAGYVQTKRMDMARELFEAMTCKNV 340
N+++ Y + + +++AR F + ++
Sbjct: 370 SACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
SWN M+ GYA G A L M + D I+W ++ G+ Q G + +L F
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQR 489
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M G N + + L+ C + +L+LGK++HG +++ E VG+AL+ MY C S
Sbjct: 490 MHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDS 549
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+E A F E+ +DV+ WN++I+ A+ G +AL L M ++ + +TMV L A
Sbjct: 550 LEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPA 609
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS + +G E + R G+ + ++D+ GR G + +++ + MP + D
Sbjct: 610 CSKLAALRQGKEIHQFIIR-CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLV 667
Query: 577 TWGALLGACRLYG 589
+W ++ ++G
Sbjct: 668 SWNVMISVYGMHG 680
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 11/232 (4%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ S+L C L +L LG Q+H QLV G + F+G+ LL +YC+ G VE+A F+++
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+++V SW ++ Y G ++ + LF M G++PD + ACS G +
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
+ M G NS ++D+ + GR+D A+ + + F+ D W ++ Y
Sbjct: 212 VYDYM-LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSG---Y 266
Query: 589 GKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
+KA + I +M +P+ ++S YA SG++ + SK L+M
Sbjct: 267 TSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEM 317
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 171/391 (43%), Gaps = 38/391 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N + + + + A F + + VS+NAM++GY L G + A ++ +
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454
Query: 118 MP----QRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQN 167
M + D+++WN +++G+ + AA F+ M P +S G +N
Sbjct: 455 MKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRN 514
Query: 168 GYADAARRIFDRMLEKNEISW-----NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
+ I +L +N I + L++ Y +E AC +F + +VV WNS+
Sbjct: 515 --LKLGKEIHGYVL-RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSI 571
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITGYAQNNYLA------EAQRLFEEAPV 275
+ + R +A + M + + EV+ TM++ + LA E + +
Sbjct: 572 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL 631
Query: 276 KDV-FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY-VQTKRMDMAR--EL 331
F +++ Y + G + ++R IFD MP+++ VSWN MI+ Y + MD +
Sbjct: 632 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQX 691
Query: 332 FEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDCI-----SWAAIIAGYAQSG 385
F M K N ++ +++ + SG I F M + +A ++ +++G
Sbjct: 692 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAG 751
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
++L FIE + N + + S+L C
Sbjct: 752 QFNETLE-FIEKMPF--EPNAAVWGSLLGAC 779
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/612 (38%), Positives = 364/612 (59%), Gaps = 25/612 (4%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++S Y G+L AR+VFD +P R+ S+N ++S Y R AR LFE +P D
Sbjct: 56 NTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 156 SWNTMLSGYAQNG--YADAARRIFDRM----LEKNEISWNGLLAAYV--QNGRIEEAC-- 205
S+N +++ A++G +A A R M N S+ L+A ++ R E
Sbjct: 116 SYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHG 175
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
++ S +V +L+ + K +R DA+ +FD MP R+ VSWN++IT Y QN + E
Sbjct: 176 LVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 266 AQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMPEKN-----TVSWNAMI 316
A LF E F T ++++S E R + M +++ V NA++
Sbjct: 236 ALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALV 295
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
Y + R AR +F++M ++V S +++ GYA+S + A+ +F +M + + I+W
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNV 355
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+IA YAQ+G E+++RLF+++KR + +VL+ C N+A L+LG+Q H ++K G
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEG 415
Query: 437 F------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
F E+ FVGN+L+ MY K GS+++ FE + +D +SWN MI GYA++G KD
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
AL LFE M PD +TM+G+LSAC H+GLV++G +F+ M D+G+ P+ HYTCMV
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMV 535
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLLGRAG L EA+ L+K+MP EPD+ W +LLGACRL+ EL E+ A +FE++PEN+G
Sbjct: 536 DLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSG 595
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YVLLSN+YA G+W DV +VR M+DRGV K G SW+E+ +K++ F D HP ++
Sbjct: 596 PYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNE 655
Query: 671 IYAYLEELEFKL 682
I++ L ++ ++
Sbjct: 656 IHSTLRIIQMEM 667
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 150/606 (24%), Positives = 245/606 (40%), Gaps = 142/606 (23%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++T+ R G A VF+ +P R++ SYNA++S Y G+ D AR +F+ +P D
Sbjct: 56 NTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 125 SWNVMISGYVRN----------------------------KSLSA------------ARN 144
S+N +++ R+ +LSA
Sbjct: 116 SYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHG 175
Query: 145 LFEMMPKRDVVSWNTMLSG-YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
L P D V T L YA+ ARR+FD M E+N +SWN L+ Y QNG + E
Sbjct: 176 LVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 204 ACMLF-ESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE-----VSWNTMI 254
A +LF E A + V+ +S+M + + + M RD V N ++
Sbjct: 236 ALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALV 295
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
YA+ EA+ +F+ P + V + T++++GY ++ V++A+++F M EKN ++WN
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNV 355
Query: 315 MIAGYVQTKRMDMARELFEAM-----------------TCKNVASW-------------- 343
+IA Y Q + A LF + C N+A
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEG 415
Query: 344 --------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
N+++ Y ++G I +F+RM D +SW A+I GYAQ+G ++D
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L LF M E + VLS C +
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGH------------------------------- 504
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVIS-----WNTMIAGYARHGFGKDALMLFESMKTVGIK 504
G V+E F + + I+ + M+ R G K+A L + M T +
Sbjct: 505 ----SGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPT---E 557
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQ 563
PD + +L AC VE G + R + + P NS Y + ++ G+ +
Sbjct: 558 PDSVLWASLLGACRLHKNVELGER---TAGRLFELDPENSGPYVLLSNMYAEMGKWADVF 614
Query: 564 NLMKNM 569
+ ++M
Sbjct: 615 RVRRSM 620
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 207/439 (47%), Gaps = 53/439 (12%)
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
A + R C+L +S E N+L+ + + RL +A+ +FD +P+R+ S+N
Sbjct: 30 APSLPGARAAHGCVL-KSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNA 88
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK--VDEARMIFDAMPEK--- 307
+++ YA+ EA+ LFE P D ++ A+V+ ++G+ +A AM
Sbjct: 89 LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFV 148
Query: 308 -NTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNL 362
N S+ + ++ K + ++ + +V ++ YA+ AR +
Sbjct: 149 LNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRV 208
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD MP+ + +SW ++I Y Q+G ++L LF+EM G + +SV+S CA LA+
Sbjct: 209 FDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAE 268
Query: 423 ELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCG-------------------------- 455
G+Q+H +VK + NAL+ MY KCG
Sbjct: 269 REGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAG 328
Query: 456 -----SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
+VE+A F ++V+K+VI+WN +IA YA++G ++A+ LF +K I P T
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTY 388
Query: 511 VGILSACSHTGLVEKGTEYFYSMNR-----DYGVIPNSKHYT--CMVDLLGRAGRLDEAQ 563
+L+AC + +++ G + + + D+G P S + +VD+ + G +D+
Sbjct: 389 GNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFG--PESDVFVGNSLVDMYLKTGSIDDGA 446
Query: 564 NLMKNMPFEPDAATWGALL 582
+ + M D +W A++
Sbjct: 447 KVFERMAAR-DNVSWNAMI 464
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 179/424 (42%), Gaps = 106/424 (25%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA---------------------------- 111
A VF++MP R+ VS+N++I+ Y NG + A
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAG 264
Query: 112 -------RQVFDQMPQR-----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
RQV M +R D+V N ++ Y + AR +F+ MP R VVS +
Sbjct: 265 LAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETS 324
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANW-- 214
+L+GYA++ + A+ +F +M+EKN I+WN L+AAY QNG EEA LF + + W
Sbjct: 325 ILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384
Query: 215 ----------------------------------------EVVSWNSLMGGFVKQKRLGD 234
+V NSL+ ++K + D
Sbjct: 385 HYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE------EAPVKDVFTWTAMVSGY 288
+F+RM RD VSWN MI GYAQN +A LFE E P D T ++S
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENP--DSVTMIGVLSAC 502
Query: 289 VQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVAS 342
+G VDE R F M E + ++ + M+ + + A EL + M T +
Sbjct: 503 GHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVL 562
Query: 343 WNTMITGY-----AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
W +++ + GE T R LF+ P++ + + YA+ G D R+ M
Sbjct: 563 WASLLGACRLHKNVELGERTAGR-LFELDPENSG-PYVLLSNMYAEMGKWADVFRVRRSM 620
Query: 398 KRYG 401
K G
Sbjct: 621 KDRG 624
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 31/263 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG-------QLDPAR 112
++ WNV I + +NG + A+ +F + +R S+ G +LN QL
Sbjct: 349 NVIAWNVLIAAYAQNGEEEEAIRLFVQL-KRDSIWPTHYTYGNVLNACGNIAVLQLGQQA 407
Query: 113 QV--------FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
V FD P+ D+ N ++ Y++ S+ +FE M RD VSWN M+ GY
Sbjct: 408 HVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGY 467
Query: 165 AQNGYADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-- 218
AQNG A A +F+RML NE ++ G+L+A +G ++E F ++
Sbjct: 468 AQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPS 527
Query: 219 ---WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLF 270
+ ++ + L +A+ + MP D V W +++ +N L E A RLF
Sbjct: 528 RDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLF 587
Query: 271 EEAPVKDVFTWTAMVSGYVQNGK 293
E P ++ + + + Y + GK
Sbjct: 588 ELDP-ENSGPYVLLSNMYAEMGK 609
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/469 (46%), Positives = 294/469 (62%), Gaps = 5/469 (1%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
A++ Y + D AR LF+ M +V M+T YA+ G + AR LFD MP D I
Sbjct: 169 TALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFI 228
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
W A+I GY Q G ++LRLF M R G + LS A L + E G+ LH +
Sbjct: 229 CWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV 288
Query: 433 V---KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
+V A VG AL+ MYCKCGS+E+A F I DKD++ WN MI GYA HG +
Sbjct: 289 KNSRRVQLNA--RVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSR 346
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
AL +F +++ G+ P DIT +G+L+ACSH+GLV++G ++F SM +Y ++P +HY CM
Sbjct: 347 KALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCM 406
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
VDLLGRAG ++EA +L+++M PD W +LL ACRL+ L ++ A+ + N+
Sbjct: 407 VDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANS 466
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
GMY+LLSN+YAA G W +V++VR M+ G++K G S +EV KV+ F GD HP D
Sbjct: 467 GMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTD 526
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
IYA LE++ +K+ G V T+LVLHD+ E KE L HSEKLAVA+G++S G I
Sbjct: 527 EIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETI 586
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+++KNLR C DCH +K ISKI GR I+ RD NRFHHF GSC+CGDYW
Sbjct: 587 KIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 635
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 15/246 (6%)
Query: 80 ALHVFNSMPRRSSVSY--NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
ALH + + SY A++ Y G D AR +FD+MP +V M++ Y +
Sbjct: 151 ALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMG 210
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLA 193
+L AR LF+ MP +D + WN M+ GY Q+G + A R+F ML + +E++ L+
Sbjct: 211 ALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALS 270
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGG-----FVKQKRLGDAKWIFDRMPVRDEV 248
A Q G E L N V N+ +G + K L DA +F+ + +D V
Sbjct: 271 AVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIV 330
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
WN MI GYA + +A +F + + + T+ +++ +G VDE F +M
Sbjct: 331 VWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSM 390
Query: 305 PEKNTV 310
E+ +
Sbjct: 391 EEEYAI 396
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 23/293 (7%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
+ R G D+A +F+ MP V AM++ Y G LD AR++FD MP +D + WN MI
Sbjct: 175 YARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMI 234
Query: 131 SGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIF-----DRML 181
GY ++ + A LF M + D V+ LS AQ G A++ R + R +
Sbjct: 235 DGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRV 294
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ N L+ Y + G +E+A +F S + ++V WN+++ G+ A +F +
Sbjct: 295 QLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQ 354
Query: 242 MPVRDEVSWNTMIT------GYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQ 290
+ R + W T IT + + + E + F E A V + + MV +
Sbjct: 355 L--RSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGR 412
Query: 291 NGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G ++EA + +M +TV W +++A K M + +++ + + +A+
Sbjct: 413 AGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLAN 465
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 147/367 (40%), Gaps = 81/367 (22%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D ++ YA+ A+ LF+E P V TAM++ Y + G +D+AR +FD MP
Sbjct: 164 DSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMP 223
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAM--------------TCKNVASWNTMITG-- 349
K+ + WNAMI GY Q R + A LF M VA T +G
Sbjct: 224 SKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRW 283
Query: 350 ------------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
Y + G + A ++F+ + D + W A+I GYA G
Sbjct: 284 LHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHG 343
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
S +L +F +++ G F +L+ C++ ++ G Q F+
Sbjct: 344 DSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF--------FQ------- 388
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
S+EE Y IV K + + M+ R G ++A L +SM I P
Sbjct: 389 ----------SMEEEY----AIVPK-IEHYGCMVDLLGRAGLIEEAFHLVQSMT---IAP 430
Query: 506 DDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
D + V +L+AC + L ++ +Y + G + NS Y + ++ G +E
Sbjct: 431 DTVMWVSLLAACRLHKNMALGQQIADYLVA-----GGLANSGMYILLSNIYAAVGNWEEV 485
Query: 563 QNLMKNM 569
+ M
Sbjct: 486 ARVRSMM 492
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 38/290 (13%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA S + L P + + + I ++ G +L L EM G
Sbjct: 77 YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 136
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+S L C LA LG+ LH K+ +V ALL MY + G + A F+E+ D
Sbjct: 137 SSSLPACHGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPD 193
Query: 470 -------------------------------KDVISWNTMIAGYARHGFGKDALMLFESM 498
KD I WN MI GY +HG +AL LF M
Sbjct: 194 PHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM 253
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+ PD++ ++ LSA + G E G + V N++ T ++D+ + G
Sbjct: 254 LRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGS 313
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
L++A ++ ++ + D W A++ ++G + KA E+ ++ +
Sbjct: 314 LEDAVSVFNSIG-DKDIVVWNAMINGYAMHGDS---RKALEMFSQLRSQG 359
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 33/187 (17%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR 121
R I + + G + A+ VFNS+ + V +NAMI+GY ++G A ++F Q+ +
Sbjct: 299 RVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQ 358
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
L ++ G +L+ + +G D + F M
Sbjct: 359 GLWPTDITFIG---------------------------LLNACSHSGLVDEGHQFFQSME 391
Query: 182 EKNEI-----SWNGLLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGGFVKQKRLGDA 235
E+ I + ++ + G IEEA L +S + V W SL+ K +
Sbjct: 392 EEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALG 451
Query: 236 KWIFDRM 242
+ I D +
Sbjct: 452 QQIADYL 458
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/469 (46%), Positives = 294/469 (62%), Gaps = 5/469 (1%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
A++ Y + D AR LF+ M +V M+T YA+ G + AR LFD MP D I
Sbjct: 168 TALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFI 227
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
W A+I GY Q G ++LRLF M R G + LS A L + E G+ LH +
Sbjct: 228 CWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV 287
Query: 433 V---KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGK 489
+V A VG AL+ MYCKCGS+E+A F I DKD++ WN MI GYA HG +
Sbjct: 288 KNSRRVQLNA--RVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSR 345
Query: 490 DALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
AL +F +++ G+ P DIT +G+L+ACSH+GLV++G ++F SM +Y ++P +HY CM
Sbjct: 346 KALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCM 405
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
VDLLGRAG ++EA +L+++M PD W +LL ACRL+ L ++ A+ + N+
Sbjct: 406 VDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANS 465
Query: 610 GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
GMY+LLSN+YAA G W +V++VR M+ G++K G S +EV KV+ F GD HP D
Sbjct: 466 GMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTD 525
Query: 670 RIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPI 729
IYA LE++ +K+ G V T+LVLHD+ E KE L HSEKLAVA+G++S G I
Sbjct: 526 EIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETI 585
Query: 730 RVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+++KNLR C DCH +K ISKI GR I+ RD NRFHHF GSC+CGDYW
Sbjct: 586 KIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 634
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 15/246 (6%)
Query: 80 ALHVFNSMPRRSSVSY--NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
ALH + + SY A++ Y G D AR +FD+MP +V M++ Y +
Sbjct: 150 ALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMG 209
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLA 193
+L AR LF+ MP +D + WN M+ GY Q+G + A R+F ML + +E++ L+
Sbjct: 210 ALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALS 269
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGG-----FVKQKRLGDAKWIFDRMPVRDEV 248
A Q G E L N V N+ +G + K L DA +F+ + +D V
Sbjct: 270 AVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIV 329
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
WN MI GYA + +A +F + + + T+ +++ +G VDE F +M
Sbjct: 330 VWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSM 389
Query: 305 PEKNTV 310
E+ +
Sbjct: 390 EEEYAI 395
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 23/293 (7%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
+ R G D+A +F+ MP V AM++ Y G LD AR++FD MP +D + WN MI
Sbjct: 174 YARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMI 233
Query: 131 SGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIF-----DRML 181
GY ++ + A LF M + D V+ LS AQ G A++ R + R +
Sbjct: 234 DGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRV 293
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ N L+ Y + G +E+A +F S + ++V WN+++ G+ A +F +
Sbjct: 294 QLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQ 353
Query: 242 MPVRDEVSWNTMIT------GYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQ 290
+ R + W T IT + + + E + F E A V + + MV +
Sbjct: 354 L--RSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGR 411
Query: 291 NGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G ++EA + +M +TV W +++A K M + +++ + + +A+
Sbjct: 412 AGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLAN 464
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 147/367 (40%), Gaps = 81/367 (22%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D ++ YA+ A+ LF+E P V TAM++ Y + G +D+AR +FD MP
Sbjct: 163 DSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMP 222
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAM--------------TCKNVASWNTMITG-- 349
K+ + WNAMI GY Q R + A LF M VA T +G
Sbjct: 223 SKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRW 282
Query: 350 ------------------------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
Y + G + A ++F+ + D + W A+I GYA G
Sbjct: 283 LHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHG 342
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
S +L +F +++ G F +L+ C++ ++ G Q F+
Sbjct: 343 DSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF--------FQ------- 387
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
S+EE Y IV K + + M+ R G ++A L +SM I P
Sbjct: 388 ----------SMEEEY----AIVPK-IEHYGCMVDLLGRAGLIEEAFHLVQSMT---IAP 429
Query: 506 DDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
D + V +L+AC + L ++ +Y + G + NS Y + ++ G +E
Sbjct: 430 DTVMWVSLLAACRLHKNMALGQQIADYLVA-----GGLANSGMYILLSNIYAAVGNWEEV 484
Query: 563 QNLMKNM 569
+ M
Sbjct: 485 ARVRSMM 491
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 38/290 (13%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA S + L P + + + I ++ G +L L EM G
Sbjct: 76 YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 135
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+S L C LA LG+ LH K+ +V ALL MY + G + A F+E+ D
Sbjct: 136 SSSLPACHGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPD 192
Query: 470 -------------------------------KDVISWNTMIAGYARHGFGKDALMLFESM 498
KD I WN MI GY +HG +AL LF M
Sbjct: 193 PHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM 252
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+ PD++ ++ LSA + G E G + V N++ T ++D+ + G
Sbjct: 253 LRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGS 312
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
L++A ++ ++ + D W A++ ++G + KA E+ ++ +
Sbjct: 313 LEDAVSVFNSIG-DKDIVVWNAMINGYAMHGDS---RKALEMFSQLRSQG 358
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 33/187 (17%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR 121
R I + + G + A+ VFNS+ + V +NAMI+GY ++G A ++F Q+ +
Sbjct: 298 RVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQ 357
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
L ++ G +L+ + +G D + F M
Sbjct: 358 GLWPTDITFIG---------------------------LLNACSHSGLVDEGHQFFQSME 390
Query: 182 EKNEI-----SWNGLLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGGFVKQKRLGDA 235
E+ I + ++ + G IEEA L +S + V W SL+ K +
Sbjct: 391 EEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALG 450
Query: 236 KWIFDRM 242
+ I D +
Sbjct: 451 QQIADYL 457
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/733 (35%), Positives = 377/733 (51%), Gaps = 88/733 (12%)
Query: 133 YVRNKSLSAARNLFEMMPK-RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEIS 187
Y++ L AR +F+ MP+ DV W ++SGYA+ G +F +M + + +
Sbjct: 139 YLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYT 198
Query: 188 WNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ +L G IE+ +L + + N+LM + K R DA +FD MP
Sbjct: 199 ISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMP 258
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLF----------EEAPVKDVFTWTA---------M 284
RD +SWN+MI+G N +A LF + A + V A +
Sbjct: 259 HRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRV 318
Query: 285 VSGY-VQNGKVDEARM-------------------IFDAMPEKNTVSWNAMIAGYVQTKR 324
V GY V+ G + + + IF M +KN VSW AMI Y +
Sbjct: 319 VHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGL 378
Query: 325 MDMARELFEAMTC---------------------------------------KNVASWNT 345
D LF+ M K +A N
Sbjct: 379 YDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNA 438
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y + G + A+ +FD + D ISW +I GY+++ + ++ LF EM R N
Sbjct: 439 LMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM-LLQLRPN 497
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
T +L A+L+SLE G+++H ++ G+ FV NAL+ MY KCG++ A F+
Sbjct: 498 AVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFD 557
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ +K++ISW M+AGY HG G+DA+ LFE M+ GI PD + IL ACSH+GL ++
Sbjct: 558 RLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDE 617
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G +F +M +++ + P KHYTCMVDLL G L EA + +MP EPD++ W +LL C
Sbjct: 618 GWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGC 677
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R++ +LAE+ AE +FE+EPEN G YVLL+N+YA + RW V K++ K+ RG+++ TG
Sbjct: 678 RIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTG 737
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
SW+E + KVH F + HP+ RI +L E+ +++++G K L
Sbjct: 738 CSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGE 797
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
L HS KLAVA+G+L++ GR IRV KN RVC CH A K ISK+ R IILRD+NRFH
Sbjct: 798 ALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFH 857
Query: 766 HFSGGSCSCGDYW 778
HF G CSC YW
Sbjct: 858 HFEQGRCSCRGYW 870
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 179/383 (46%), Gaps = 18/383 (4%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAP-VKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
D V ++ Y + L A+R+F+E P V DV WTA++SGY + G + E ++F M
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187
Query: 305 ------PEKNTVSWN-AMIAGYVQTKRMDMARELFEAMTC-KNVASWNTMITGYAQSGEI 356
P+ T+S IAG + ++ L E + A N ++ YA+S
Sbjct: 188 HCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRT 247
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A +FD MP D ISW ++I+G +G + ++ LF+ M GE L+ + SVL C
Sbjct: 248 KDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPAC 307
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A L L LG+ +HG VK GF + + N LL MY C F +V K+V+SW
Sbjct: 308 AELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWT 367
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
MI Y R G LF+ M G +PD + L A + L++ G R+
Sbjct: 368 AMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRN 427
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
G+ ++++ + G ++EA+ L+ + D +W L+G Y + LA +
Sbjct: 428 -GMEKVLAVTNALMEMYVKCGNMEEAK-LIFDGVVSKDMISWNTLIGG---YSRNNLANE 482
Query: 597 A----AEVIFEMEPENAGMYVLL 615
A E++ ++ P M +L
Sbjct: 483 AFSLFTEMLLQLRPNAVTMTCIL 505
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/544 (22%), Positives = 204/544 (37%), Gaps = 162/544 (29%)
Query: 102 YLLNGQLDPARQVFDQMPQ-RDLVSWNVMISGYVRNKSLSAARNLFEMM------PKRDV 154
YL G L+ AR+VFD+MPQ D+ W ++SGY + L LF M P
Sbjct: 139 YLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYT 198
Query: 155 VSW---------------------------------NTMLSGYAQNGYADAARRIFDRML 181
+S N +++ YA++ A +FD M
Sbjct: 199 ISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMP 258
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANW--------------------------- 214
++ ISWN +++ NG ++A LF W
Sbjct: 259 HRDVISWNSMISGCTSNGLYDKAIELFVRM--WLEGEELDSATLLSVLPACAELHLLFLG 316
Query: 215 EVVSWNSLMGGFVKQKRLGD---------AKW-----IFDRMPVRDEVSWNTMITGYAQN 260
VV S+ GF+ Q L + + W IF M ++ VSW MIT Y +
Sbjct: 317 RVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRA 376
Query: 261 NYLAEAQRLFEEAPVK----DVFTWT---------------------------------- 282
+ LF+E ++ D+F T
Sbjct: 377 GLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT 436
Query: 283 -AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE-------- 333
A++ YV+ G ++EA++IFD + K+ +SWN +I GY + + A LF
Sbjct: 437 NALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRP 496
Query: 334 ---AMTCKNVAS---------------------------WNTMITGYAQSGEITHARNLF 363
MTC A+ N +I Y + G + AR LF
Sbjct: 497 NAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLF 556
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
DR+ + ISW ++AGY G D++ LF +M+ G + + F+++L C++ +
Sbjct: 557 DRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRD 616
Query: 424 LGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
G + + K E ++ + G+++EAY + + ++ D W +++ G
Sbjct: 617 EGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRG 676
Query: 482 YARH 485
H
Sbjct: 677 CRIH 680
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 15/222 (6%)
Query: 409 FTSVLSTCANLASLELGKQLH-----GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ +VL C+ + SLE GK+ H L + G + +G L++MY KCG +E A
Sbjct: 94 YGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDN--VLGQKLVLMYLKCGDLENARRV 151
Query: 464 FEEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+E+ DV W +++GYA+ G ++ ++LF M G++PD T+ +L + G
Sbjct: 152 FDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGS 211
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+E G E + + G ++ ++ R +A + MP D +W +++
Sbjct: 212 IEDG-EVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHR-DVISWNSMI 269
Query: 583 GACRLYGKTELAEKAAEVIFEM--EPENAGMYVLLSNLYAAS 622
C G L +KA E+ M E E LLS L A +
Sbjct: 270 SGCTSNG---LYDKAIELFVRMWLEGEELDSATLLSVLPACA 308
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/526 (40%), Positives = 325/526 (61%), Gaps = 12/526 (2%)
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMI 316
L +++F+E P KDV +W +V G ++G+ EA + M P+ T+S +++
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLS--SVL 180
Query: 317 AGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
+ + + EL T +V +++I YA ++ +FD +P D I
Sbjct: 181 PIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAI 240
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
W +++AG AQ+G +++L LF M G + F+S++ C NLASL LGKQLH +
Sbjct: 241 LWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV 300
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
++ GF+ F+ ++L+ MYCKCG+V A F+ I D++SW MI G+A HG ++AL
Sbjct: 301 IRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREAL 360
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+LF+ M+ +KP+ IT + +L+ACSH GLV+KG +YF SM+ YG++P+ +H+ + D
Sbjct: 361 VLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADT 420
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGR G+L+EA N + M +P A+ W LL AC+++ T LAE+ A+ IF++EP + G +
Sbjct: 421 LGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSH 480
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
++LSN Y++SGRW + + +R MR +G++K SW+EV+NK H F D HP +RI
Sbjct: 481 IILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERII 540
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
L ++ + G+V +T V D+ EE+K +L HSEKLA+ +GI+S P G IRVM
Sbjct: 541 DALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVM 600
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLRVC DCH K ISKIVGR I++RD NRFHHF G CSCGD+W
Sbjct: 601 KNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 27/287 (9%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L + R +F+ MP++DVVSWNT++ G A++G A + M + + + + +L
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182
Query: 195 YVQNGRIEEACML--FESKANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+ + + L F ++ + +V +SL+ + R + +FD +PVRD + W
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242
Query: 251 NTMITGYAQNNYLAEAQRLFEE------APVKDVFTWTAMVSGYVQN---GKVDEARMIF 301
N+M+ G AQN + EA LF P+ F+ G + + GK A +I
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIR 302
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
+ N +++I Y + + +AR +F+ + ++ SW MI G+A G A
Sbjct: 303 GGF-DGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALV 361
Query: 362 LFDRM------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYG 401
LFDRM P H I++ A++ + +G + + F M YG
Sbjct: 362 LFDRMELGNLKPNH--ITFLAVLTACSHAGLVDKGWKYFNSMSDHYG 406
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 104/240 (43%), Gaps = 20/240 (8%)
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN-RSPFTSV---LSTCANLASLELGKQL 428
SWA I A G ++ LF+ M+ S TS+ L +CA L LG L
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGS--------------VEEAYHAFEEIVDKDVIS 474
H ++ G A F NALL +YCK + +E F+E+ +KDV+S
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WNT++ G A G +AL L M G KPD T+ +L + V +G E
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
R+ G + + ++D+ R D + + N+P DA W ++L C G + A
Sbjct: 201 RN-GFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSMLAGCAQNGSVDEA 258
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 53/281 (18%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTMLSG 163
L+ R+VFD+MP++D+VSWN ++ G + ++L R ++ K D + +++L
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182
Query: 164 YAQ----------------NG--------------YADAAR-----RIFDRMLEKNEISW 188
+A+ NG YA+ R ++FD + ++ I W
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
N +LA QNG ++EA LF + + V+++SL+ L K + + +
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV-I 301
Query: 245 RDEVSWNTMITG-----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
R N I+ Y + ++ A+R+F+ D+ +WTAM+ G+ +G EA +
Sbjct: 302 RGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALV 361
Query: 300 IFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+FD M + N +++ A++ +D + F +M+
Sbjct: 362 LFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMS 402
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D+ + +I Y + +F+ +P RD + WN+ML+G AQNG D A +F RML
Sbjct: 207 DVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRML 266
Query: 182 EKN----EISWNGLLAAYVQNGRI----EEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
++++ L+ A + + + + V +SL+ + K +
Sbjct: 267 HSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVS 326
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYV 289
A+ IFDR+ D VSW MI G+A + EA LF+ + ++ T+ A+++
Sbjct: 327 IARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACS 386
Query: 290 QNGKVDEARMIFDAMPEK----NTVSWNAMIAGYV-QTKRMDMARELFEAMTCKNVAS-W 343
G VD+ F++M + ++ +A +A + + +++ A M K AS W
Sbjct: 387 HAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVW 446
Query: 344 NTMI 347
+T++
Sbjct: 447 STLL 450
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 54/283 (19%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----------------- 120
D ++ VF+++P R ++ +N+M++G NG +D A +F +M
Sbjct: 225 DYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPAC 284
Query: 121 -----------------RDLVSWNVMISG-----YVRNKSLSAARNLFEMMPKRDVVSWN 158
R NV IS Y + ++S AR +F+ + D+VSW
Sbjct: 285 GNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWT 344
Query: 159 TMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN- 213
M+ G+A +G A A +FDRM L+ N I++ +L A G +++ F S ++
Sbjct: 345 AMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDH 404
Query: 214 WEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE- 265
+ +V +L + +L +A M ++ S W+T++ +N LAE
Sbjct: 405 YGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEE 464
Query: 266 -AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
A+++F+ P + + + + + Y +G+ +EA + +M +K
Sbjct: 465 VAKKIFDLEP-RSMGSHIILSNTYSSSGRWNEAAHLRKSMRKK 506
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 129/297 (43%), Gaps = 31/297 (10%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
+++I Y + D + +VFD +P RD + WN M++G +N S+ A LF M +
Sbjct: 212 SSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIK 271
Query: 155 ---VSWNTMLSG--------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
V++++++ + +A R FD N + L+ Y + G +
Sbjct: 272 PMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFD----GNVFISSSLIDMYCKCGNVSI 327
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQ 259
A +F+ + ++VSW +++ G +A +FDRM + + +++ ++T +
Sbjct: 328 ARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSH 387
Query: 260 NNYLAEAQRLFEEAP-----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WN 313
+ + + F V + A+ + GK++EA M K T S W+
Sbjct: 388 AGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWS 447
Query: 314 AMIAGYVQTKRM----DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
++ K ++A+++F+ + +++ S + Y+ SG A +L M
Sbjct: 448 TLLRACKVHKNTVLAEEVAKKIFD-LEPRSMGSHIILSNTYSSSGRWNEAAHLRKSM 503
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/575 (40%), Positives = 340/575 (59%), Gaps = 20/575 (3%)
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT-------GYAQNNYLAEAQRLFEEA 273
SL+ + R+GD K I M VR ++ +T +T + ++A A R+F
Sbjct: 9 SLVAAIKRCTRVGDLKAIQAHM-VRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCT 67
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
++F W ++ GY + A R +F N+ ++ ++ + R+ +
Sbjct: 68 HHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQ 127
Query: 330 ELFEAMTCKNVASWNTMITG----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
EL + + ++ G YA G + +A +FD MP+ D SW+ +++GYAQ+G
Sbjct: 128 ELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNG 187
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+ ++L+LF EM+ E ++ FT SV+ C +L +L+LGK +H + K G + +
Sbjct: 188 QAVEALKLFREMQ--AENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVL 245
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
G AL+ MY KCGS++ A F+ + ++DV +W+TMIAGYA HG G+ AL LF++MK
Sbjct: 246 GTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKT 305
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
P+ +T +LSACSH+GLVEKG + F +M +Y + P KHY CMVDL RAG + A
Sbjct: 306 IPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAH 365
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
++ MP EP+ W LLGAC+ +G +L E + I +++P + YVL+SN+YA+ G
Sbjct: 366 KFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLG 425
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW V +VR M+D+ KK G+S +E+ VH F +GD HPE+++IY L ++ KLK
Sbjct: 426 RWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLK 485
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
Q G V ST VLHD+ EEEKE+ L HSE+LA+AYG+L P G PIR++KNLRVC DCH
Sbjct: 486 QVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHE 545
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IK IS++ R II+RD RFHHF CSC DYW
Sbjct: 546 VIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 57/346 (16%)
Query: 100 SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS--------------------- 138
S L+G + A ++F +L WN +I GY + S
Sbjct: 49 SAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSY 108
Query: 139 -----LSAARNLFEMMPKRDVVSW-------------NTMLSGYAQNGYADAARRIFDRM 180
L A L + +++ S N ++ YA G D A +FD M
Sbjct: 109 TFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEM 168
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAK 236
E + SW+ +++ Y QNG+ EA LF + + + S++G L K
Sbjct: 169 PEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGK 228
Query: 237 WI---FDRMPVRDEVSWNTMITG-YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
W+ D+ V+ +V T + G Y++ L A ++F+ +DV W+ M++GY +G
Sbjct: 229 WVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHG 288
Query: 293 KVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASW 343
++A +FDAM N V++ ++++ + ++ ++FE M + +
Sbjct: 289 HGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHY 348
Query: 344 NTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
M+ + ++G + HA MP + + + W ++ GY +
Sbjct: 349 GCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKD 394
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 49/254 (19%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D++ N I + GC D A +F+ MP S S++ M+SGY NGQ A ++F +
Sbjct: 139 DFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFRE 198
Query: 118 MPQR---------------------------------------DLVSWNVMISGYVRNKS 138
M D+V ++ Y + S
Sbjct: 199 MQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGS 258
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA 194
L A +F+ M +RDV +W+TM++GYA +G+ + A ++FD M N +++ +L+A
Sbjct: 259 LDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSA 318
Query: 195 YVQNGRIEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
+G +E+ +FE+ K ++ + ++ F + +G A MP+ V
Sbjct: 319 CSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVV 378
Query: 250 -WNTMITGYAQNNY 262
W T++ + Y
Sbjct: 379 LWRTLLGACKTHGY 392
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 18/241 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I Y G +D A +FD+MP+ D SW+ M+SGY +N A LF M +V
Sbjct: 146 NGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVS 205
Query: 156 SWNTMLSGY----AQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
S L+ G D + + M ++ + + L+ Y + G ++ A +
Sbjct: 206 SDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKV 265
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYL 263
F+ A +V +W++++ G+ A +FD M + + V++ ++++ + + +
Sbjct: 266 FQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLV 325
Query: 264 AEAQRLFEEAPVKDVFT-----WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIA 317
+ ++FE + T + MV + + G V A MP E N V W ++
Sbjct: 326 EKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLG 385
Query: 318 G 318
Sbjct: 386 A 386
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 259/819 (31%), Positives = 410/819 (50%), Gaps = 100/819 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQV- 114
D+ W + + +NGC AL + M + + V++ ++ LD R++
Sbjct: 123 DVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIH 182
Query: 115 ---FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
++ + D + N ++ Y S +++F M + V+ W TM++G +QNG +
Sbjct: 183 HRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYE 242
Query: 172 AARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSLM 223
+F +M ++ NE+++ ++ ++E M+ ES + SL+
Sbjct: 243 EGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLI 302
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-------- 275
+ + L AK + + M RD V+WN M+T AQN EA L +
Sbjct: 303 SLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKV 362
Query: 276 --------------------------------KDVFTWTAMVSGYVQNGKVDEARMIFDA 303
++V ++++ Y + G+ + A +F+A
Sbjct: 363 TYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEA 422
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----------------------- 340
MP K+ VSWNA+I V + A ELF M + +
Sbjct: 423 MPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLA 482
Query: 341 -----------------ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
A N+++ YA+ G + A+ FD + + ++W+ I+A YAQ
Sbjct: 483 RQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQ 542
Query: 384 S--GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF-EAG 440
S G + + F EM+ G + F S L CA +A+LE G+ +H + GF E
Sbjct: 543 SKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETS 602
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+GN ++ MY KCGS +A F+++ +K +ISWN++I YA +G +AL + M
Sbjct: 603 LVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLL 662
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G PD T V IL SH GL+E+G E+F S +D+G+ P+S C+VDLL R G LD
Sbjct: 663 QGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLD 722
Query: 561 EAQNLMKNMP-FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
A+ L+ P + D W LL AC+ YG + + AE +FE+EP+++G +V+L+NLY
Sbjct: 723 AAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLY 782
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A+ GRW D S++R M VKK G SW+E+ VH F G++ HP+ I LE+L
Sbjct: 783 ASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLT 842
Query: 680 FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCE 739
++++ G+V T V+HDV E +KE +L HSE+LA+ +G++S G IRV+KNLRVC
Sbjct: 843 LRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCS 902
Query: 740 DCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH A K IS +VGR I++RD++RFHHF G CSCGD+W
Sbjct: 903 DCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 174/694 (25%), Positives = 302/694 (43%), Gaps = 117/694 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
++ W + + + +NG AL +F M R V + + +G+LD RQ+
Sbjct: 22 NVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIH 81
Query: 116 DQMPQRDLVSWNVMISG-----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG-- 168
+ L S N++IS Y + + + A +F+ M RDVVSW ML+ YAQNG
Sbjct: 82 SSVVGSGLTS-NIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCW 140
Query: 169 ---------------------------------YADAARRIFDRM----LEKNEISWNGL 191
D R+I R+ LE + I N L
Sbjct: 141 SQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNAL 200
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DE 247
+ Y G ++ +F V+ W +++ G + + + +F +M + +E
Sbjct: 201 VHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANE 260
Query: 248 VSWNTMITGYAQNNYLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
V++ +M+ + + E + R+ E T+++S Y Q G +D A+ + +
Sbjct: 261 VTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEH 320
Query: 304 MPEKNTVSWNAMIAGYVQT----------KRMDM-------------------------- 327
M +++ V+WNAM+ Q +RMDM
Sbjct: 321 MYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQG 380
Query: 328 ----ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
AR L + + VA N++IT Y + G+ A ++F+ MP+ D +SW A+I
Sbjct: 381 REIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVG 440
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-GCF 442
+ +D+L LF M+ G R N S+L C L L+L +Q+H + GF
Sbjct: 441 NSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTA 500
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA--RHGFGKDALMLFESMKT 500
VGN+++ MY +CGS+ +A AF+ + +K +++W+ ++A YA + G G+ A F+ M+
Sbjct: 501 VGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEA 560
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR---DYGVIPNSKHY-TCMVDLLGRA 556
GIKP ++T V L AC+ +E G SM+R G + S ++++ G+
Sbjct: 561 EGIKPGEVTFVSALDACAAMATLEHGR----SMHRRAAASGFVETSLVLGNTIINMYGKC 616
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGM 611
G +A+ + MP E +W +L+ A Y A +A + EM +P++
Sbjct: 617 GSPSDAKLVFDQMP-EKCLISWNSLIVA---YAHNGHALEALSSLQEMLLQGFDPDSGTS 672
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
+L L A V R ++D G++ +G
Sbjct: 673 VSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSG 706
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 175/337 (51%), Gaps = 10/337 (2%)
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSW 312
Y + + +A +F+ K+VF+WT M++ Y QNG EA +F M + T V +
Sbjct: 2 YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61
Query: 313 NAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
+ + +D R++ ++ N+ N+++ Y + ++ A +FD M
Sbjct: 62 VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLL 121
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D +SW A++A YAQ+G +L M G + N+ F +++ CA L L+LG+++
Sbjct: 122 RDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKI 181
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H +++ G E +GNAL+ MY CGS ++ F + V+ W TMIAG +++G
Sbjct: 182 HHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQY 241
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
++ L++F M G+K +++T + ++ C + V++G E + + ++ T
Sbjct: 242 EEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEG-EMIDARILESPFCSSTLLATS 300
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
++ L G+ G LD A+ L+++M ++ D W A++ AC
Sbjct: 301 LISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTAC 336
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY KC V +A F+ I K+V SW M+A Y+++G ++AL LF M+ G +PD +
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
V L AC+ +G ++ G + +S G+ N +V++ G+ + A+ + M
Sbjct: 61 FVIALDACAASGELDHGRQ-IHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
D +W A+L +Y + +A E + M+ E
Sbjct: 120 LLR-DVVSWTAMLA---VYAQNGCWSQALECLSRMDAE 153
>gi|358346115|ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503052|gb|AES84255.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 592
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/577 (39%), Positives = 346/577 (59%), Gaps = 25/577 (4%)
Query: 41 LKRHLNS-KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMI 99
L H+ S S+ K + Q N I+ +R G +A +F+S R++V++N+MI
Sbjct: 17 LAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMI 76
Query: 100 SGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR---NKSLSAARNLFEMMPKRDVVS 156
+GY+ ++ ARQ+FD+MP RD+VSWN++ISGY ++ + R LF++MP+RD VS
Sbjct: 77 TGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVS 136
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
WNT++SGYA+NG D A IF+ M E+N +S N ++ ++ NG ++ A F +
Sbjct: 137 WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDS 196
Query: 217 VSWNSLMGGFVKQKRLGDAKWIF----DRMPVRDEV--SWNTMITGYAQNNYLAEAQRLF 270
S + L+ G V+ +L A I + +D++ ++NT+I GY Q + EA+ +F
Sbjct: 197 ASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVF 256
Query: 271 EEAPV-------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
+ ++V +W +M+ YV+ G V AR +FD M E++ SWN +I
Sbjct: 257 DGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIG 316
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
GYVQ M+ A +LF M +V SWN++I+G++Q G++ + F+ MP + ISW ++
Sbjct: 317 GYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSV 376
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IAGY ++ + ++ LF +M+ GER +R +S+LS L L LGKQ+H Q V
Sbjct: 377 IAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIH-QFVTKTV 435
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFE 496
+ N+L+ MY +CG + +A H F E+ + KDVI+WN MI GYA HGF AL LFE
Sbjct: 436 VPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFE 495
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
MK + I+P IT + +L+AC+H GLVE+G F SM DYG+ P +H+ +VD+LGR
Sbjct: 496 RMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQ 555
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
G+L EA +L+ NMP +PD A WGALLGACR++ +L
Sbjct: 556 GQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDL 592
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/716 (34%), Positives = 387/716 (54%), Gaps = 77/716 (10%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSG 163
L+ A QVF +MP + + WN I ++++ L LF M K + + +L
Sbjct: 725 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 784
Query: 164 YAQNGYADAARRI----FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
+ G +AA++I F L+ + N L++ Y +NG++E A
Sbjct: 785 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELA--------------- 829
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK 276
+ +FD M R+ SWN+MI+ YA +L +A LF E + +K
Sbjct: 830 ----------------RRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMK 873
Query: 277 -DVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE- 330
D+ TW ++SG+ +G +E I M + N+ S +++ + ++M +E
Sbjct: 874 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKET 933
Query: 331 ----LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
L C +V ++I Y ++ + A+ +FD M + +W ++++GY+ G
Sbjct: 934 HGYVLRNGFDC-DVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGM 992
Query: 387 SEDSLRLFIEMKRYGERL------------------------NRSPFTSVLSTCANLASL 422
ED+LRL +M++ G + N + T +L CA+L+ L
Sbjct: 993 FEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLL 1052
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+ GK++H ++ GF FV AL+ MY K S++ A+ F I +K + SWN MI G+
Sbjct: 1053 QKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGF 1112
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A G GK+A+ +F M+ VG+ PD IT +LSAC ++GL+ +G +YF SM DY ++P
Sbjct: 1113 AIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPR 1172
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVDLLGRAG LDEA +L+ MP +PDA WGALLG+CR++ AE AA+ +F
Sbjct: 1173 LEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLF 1232
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
++EP N+ Y+L+ NLY+ RW D+ +R M GV+ +SW+++ +VH FS +
Sbjct: 1233 KLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDE 1292
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP+ +IY L +L ++K+ G+V V ++ E EK+ +L H+EKLA+ YG++
Sbjct: 1293 KPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIK 1352
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ AG PIRV+KN R+C DCH+A K+IS + R + LRD RFHHF G CSC D+W
Sbjct: 1353 MKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 166/344 (48%), Gaps = 29/344 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
N +IS Y NG+L+ AR+VFD M R+ SWN MIS Y L+ A +LF + K
Sbjct: 814 NPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMK 873
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI----EE 203
D+V+WN +LSG+ +GY + I RM + N S +L A + G + E
Sbjct: 874 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKET 933
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ + + +V SL+ +VK L A+ +FD M R+ +WN++++GY+
Sbjct: 934 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 993
Query: 264 AEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+A RL +E D+ TW M+SGY G +A M N+ S ++
Sbjct: 994 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM-------PNSASITCLLRAC 1046
Query: 320 VQTKRMDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
+ +E+ ++ +N V +I Y++S + +A +F R+ SW
Sbjct: 1047 ASLSLLQKGKEI-HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASW 1105
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
+I G+A G ++++ +F EM++ G + FT++LS C N
Sbjct: 1106 NCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 1149
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 7/300 (2%)
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++ Y + + A +F MP + + W I QS + + LF +M+ +
Sbjct: 714 ALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKA 773
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ VL C + +L KQ+HG + + G ++ + N L+ MY K G +E A F
Sbjct: 774 ETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVF 833
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + +++ SWN+MI+ YA GF DA LF +++ +KPD +T +LS G E
Sbjct: 834 DSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 893
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD---EAQNLMKNMPFEPDAATWGAL 581
+ M + G PNS T ++ + G L+ E + F+ D +L
Sbjct: 894 EVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 952
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
+ +Y K A V M+ N + L + Y+ G + D ++ +M G+K
Sbjct: 953 ID---MYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 1009
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 121/269 (44%), Gaps = 6/269 (2%)
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS-GYSEDSLRLFIEMKR 399
A+ +I+ Y G+ A +F + + W + + + S G L +F E+
Sbjct: 608 AAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG 667
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G + ++ L TC + + LG ++HG L+K GF+ ++ AL+ Y +C +E+
Sbjct: 668 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 727
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F E+ + + + WN I + + + LF M+ +K + T+V +L AC
Sbjct: 728 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 787
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
G + + + R +G+ + ++ + + G+L+ A+ + +M + ++W
Sbjct: 788 MGALNAAKQIHGYVFR-FGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWN 845
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPEN 608
+++ + Y A + +E+E +
Sbjct: 846 SMISS---YAALGFLNDAWSLFYELESSD 871
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/695 (35%), Positives = 370/695 (53%), Gaps = 44/695 (6%)
Query: 100 SGYLLNGQLDPARQVFDQMPQR--DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
S YL G+ A + R D N +I+ YV+ + AR LF++MP+R+VVSW
Sbjct: 44 SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSW 103
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV-----QNGRIEEACMLFESKA 212
M+ GY +G+ ++F M E N +A V +GRIEE
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG-------- 155
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
G F+K + E NT++ Y+ + EA R+ ++
Sbjct: 156 -------KQFHGCFLKYGL------------ISHEFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM-----IAGYVQTKRMDM 327
P D+ +++ +SGY++ G E + ++ V WN + + + + +++
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFSNLRDLNL 255
Query: 328 ARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
A ++ M V + +I Y + G++ +A+ +FD + I+ Y Q
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ 315
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
E++L LF +M N F +L++ A L+ L+ G LHG ++K G+ V
Sbjct: 316 DKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMV 375
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
GNAL+ MY K GS+E+A AF + +D+++WNTMI+G + HG G++AL F+ M G
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
P+ IT +G+L ACSH G VE+G YF + + + V P+ +HYTC+V LL +AG +A+
Sbjct: 436 IPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ M+ P E D W LL AC + L +K AE E P ++G+YVLLSN++A S
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSR 555
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
W V+KVR M +RGVKK G SW+ ++N+ H F D HPE IYA ++E+ K+K
Sbjct: 556 EWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
G+ HDV EE++E L YHSEKLAVAYG++ P P+ V KN+R+C+DCH+
Sbjct: 616 PLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHS 675
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK ISKI R I++RD+NRFHHF G CSC DYW
Sbjct: 676 AIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 27/246 (10%)
Query: 20 TQSINRLQSPANTNPYPSKKTLKRHLN--SKSRNKPKPAGDWD--IRQWNVAITTHMRNG 75
T + N + + Y K+ + LN SK K P ++ I ++A + ++ G
Sbjct: 298 THAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG 357
Query: 76 CCDSALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
LH V S R + NA+++ Y +G ++ AR+ F M RD+V+WN MISG
Sbjct: 358 ---DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414
Query: 134 VRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
+ A F+ M P R +++ +L + G+ + F+++++K ++
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNR--ITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQ 472
Query: 188 -----WNGLLAAYVQNGRIEEA-CMLFESKANWEVVSWNSLMGG-FVKQK-RLGD--AKW 237
+ ++ + G ++A + + W+VV+W +L+ +V++ RLG A++
Sbjct: 473 PDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEY 532
Query: 238 IFDRMP 243
++ P
Sbjct: 533 AIEKYP 538
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/532 (40%), Positives = 327/532 (61%), Gaps = 10/532 (1%)
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
Y++ L+EA R+F++ P KD WTAM+ GY +NG ++ A + F M + V + +
Sbjct: 86 YSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHV 145
Query: 317 AGYVQTKRMDMARE-LFEAMTC--------KNVASWNTMITGYAQSGEITHARNLFDRMP 367
V + + L +++ C VA N +I YA+S ++ A + P
Sbjct: 146 FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDP 205
Query: 368 QH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ +S ++I GY ++ E++L +++E++R G N F+S++ CA A LE G
Sbjct: 206 GGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGA 265
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
QLH Q++K FVG+ L+ MY KCG + + F EI + I+WN +I +A+HG
Sbjct: 266 QLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHG 325
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
G++A+ F+ M GI+P+ I V +L+ACSH GLV++G +YFYSM +G+ P +HY
Sbjct: 326 HGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHY 385
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
+C++D GRAGRLDEA + MP +P+A W +LLGACR+ G EL E AA+ + ++EP
Sbjct: 386 SCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEP 445
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
N G++V LS +YA+ G+W DV VR MRD +KK+ G+SW++ K H F D HP
Sbjct: 446 GNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHP 505
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
++ IY LEEL ++K++G++ T + ++ + KE +LRYHSE++AVA+ ++S+PA
Sbjct: 506 QQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPAT 565
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+PI V KNLR+C DCH A K I K+ R II+RDN+RFHHF G CSCGDYW
Sbjct: 566 KPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 162/357 (45%), Gaps = 30/357 (8%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML---- 161
G L A +VFDQMPQ+D V+W MI GY +N SL AA F M + +V + +
Sbjct: 90 GLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSV 149
Query: 162 ---SGYAQNGYADAARR--IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-SKANWE 215
SG ++G+ + + E N L+ Y ++ +E A + + W
Sbjct: 150 LSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWN 209
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFE 271
VVS S++ G+++ + +A I+ + + +E ++++MI G A L + +L
Sbjct: 210 VVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHA 269
Query: 272 EAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ ++D F + +V Y + G + + +F+ + + ++WNA+I + Q
Sbjct: 270 QVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGRE 329
Query: 328 ARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAII 378
A + F+ M + ++ +++T + +G + F M + I ++ II
Sbjct: 330 AIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCII 389
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
Y ++G +++ + EM + N + S+L C S ELG+ L+K+
Sbjct: 390 DTYGRAGRLDEAYKFISEMPI---KPNAYGWCSLLGACRMRGSKELGEVAAQNLMKL 443
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 38/352 (10%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN--- 220
Y++ G A R+FD+M +K+ ++W ++ Y +NG +E A + F +V +
Sbjct: 86 YSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHV 145
Query: 221 -----SLMGGFVKQKRLGDAKWIFDRMPVRDEVSW-NTMITGYAQNNYLAEAQRLFEEAP 274
S GG + EV+ N +I YA++ + A R+ + P
Sbjct: 146 FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDP 205
Query: 275 VK-DVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAG----------- 318
+V + T+M+ GY++ V+EA +I+ + E N ++++MI G
Sbjct: 206 GGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGA 265
Query: 319 --YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
+ Q + D+ R+ F +T++ Y + G I+ + LF+ + I+W A
Sbjct: 266 QLHAQVIKTDLIRDSFVG---------STLVDMYGKCGLISLSMQLFNEIEYRTDIAWNA 316
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKV 435
+I +AQ G+ ++++ F M G R N F S+L+ C++ ++ G K +
Sbjct: 317 VINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAH 376
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
G E + ++ Y + G ++EAY E+ + + W +++ G
Sbjct: 377 GIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 428
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 13/244 (5%)
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
MP+ + +SW +++G +Q+ D+L F M+R G R +S A L + G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
QLH V++GF+ FV + L MY KCG + EA F+++ KD ++W MI GYA++
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 486 GFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKG--TEYFYSMNRDYGVIPN 542
G + A++ F MK G + D +LSA +G ++ G ++ + G
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELE 177
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL--YGKTELAEKAAEV 600
++D+ ++ ++ A ++K D W + G + Y +T+ E+A +
Sbjct: 178 VAVRNALIDMYAKSMDVESASRVLK-----IDPGGWNVVSGTSMIDGYIETDCVEEALVI 232
Query: 601 IFEM 604
E+
Sbjct: 233 YVEL 236
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 155/363 (42%), Gaps = 35/363 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMI-------SGYLLNGQLDPAR 112
D W I + +NG ++A+ F M R V + + SG L +G L +
Sbjct: 106 DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSI 165
Query: 113 Q--VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-DVVSWNTMLSGYAQNGY 169
V + ++ N +I Y ++ + +A + ++ P +VVS +M+ GY +
Sbjct: 166 HCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDC 225
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS----WNS 221
+ A I+ + +E NE +++ ++ +E+ L +++ ++
Sbjct: 226 VEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST 285
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--- 278
L+ + K + + +F+ + R +++WN +I +AQ+ + EA + F+ +
Sbjct: 286 LVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPN 345
Query: 279 -FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
+ ++++ G VDE F +M E + + ++ +I Y + R+D A +
Sbjct: 346 HIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFI 405
Query: 333 EAMTCK-NVASWNTMI-----TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
M K N W +++ G + GE+ A+NL P + I ++ YA G
Sbjct: 406 SEMPIKPNAYGWCSLLGACRMRGSKELGEVA-AQNLMKLEPGNTGIH-VSLSGIYASLGQ 463
Query: 387 SED 389
ED
Sbjct: 464 WED 466
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/467 (44%), Positives = 301/467 (64%), Gaps = 1/467 (0%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
N+++ Y + A +F M ++V SW +M+ GY + G + AR +FD MP +
Sbjct: 158 NSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLF 217
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+W+ +I GYA++ E ++ LF MKR G N + SV+S+CA+L +LE G++ H +
Sbjct: 218 TWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYV 277
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
VK +G AL+ MY +CG +E+A FEE+ DKD +SW+++I G A HG A+
Sbjct: 278 VKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAI 337
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
F M +G P DIT+ +LSACSH GLV+KG E + +M RDYG+ P +HY C+VD+
Sbjct: 338 HYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDM 397
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG+L EA+N + MP +P+A GALLGAC++Y TE+AE+ ++ E++PE++G Y
Sbjct: 398 LGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYY 457
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG-DTLHPEKDRI 671
VLLSN+YA +G+W + +R M+++ VKK G+S +E+ K++ FS+G D HPE +I
Sbjct: 458 VLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKI 517
Query: 672 YAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
EE+ K++ G+ +T DV EEEKE + HSEKLA+AYG++ G IR+
Sbjct: 518 KRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRI 577
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLRVCEDCH A K IS++ GR I+RD NRFHHF G CSC DYW
Sbjct: 578 VKNLRVCEDCHTATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 37/368 (10%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS---LSAARNLFE 147
SS S +I G+LL L + D L++ + + +K L A +F
Sbjct: 23 SSFSDLKIIHGFLLRTHL-----ISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFS 77
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
+ ++ +N ++ ++ A + +ML K+ I + + ++ E C++
Sbjct: 78 QIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASTEMECVV 136
Query: 208 FESKANWEVVSW---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
+ + ++V + NSL+ + + A IF +MP RD VSW +M+ GY
Sbjct: 137 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYC 196
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
+ + +A+ +F+E P +++FTW+ M++GY +N ++A +F+ M + V+ ++
Sbjct: 197 KCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVS 256
Query: 319 YVQTKRMDMARELFE--------AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHD 370
+ + A E E + N+ ++ Y + GEI A +F+ +P D
Sbjct: 257 VISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKD 316
Query: 371 CISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
+SW++II G A G++ ++ F +M R G T+VLS C+ HG
Sbjct: 317 SLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACS-----------HG 365
Query: 431 QLVKVGFE 438
LV G E
Sbjct: 366 GLVDKGLE 373
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + + G +A +F MP R VS+ +M++GY G ++ AR++FD+MP
Sbjct: 153 DVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMP 212
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT----MLSGYAQNGYADAARR 175
R+L +W++MI+GY +N A +LFE+M + VV+ T ++S A G + R
Sbjct: 213 HRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGER 272
Query: 176 IFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
+ +++ N I L+ Y + G IE+A +FE + + +SW+S++ G
Sbjct: 273 AHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGH 332
Query: 232 LGDAKWIFDRM 242
A F +M
Sbjct: 333 AHKAIHYFSQM 343
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
Q D+ N ++ Y ++AA +F MP RDVVSW +M++GY + G + AR +FD
Sbjct: 151 QNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDE 210
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDA--- 235
M +N +W+ ++ Y +N E+A LFE VV+ ++M + LG
Sbjct: 211 MPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFG 270
Query: 236 ----KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
+++ + + ++ Y + + +A R+FEE P KD +W++++ G +
Sbjct: 271 ERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVH 330
Query: 292 GKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVAS 342
G +A F M ++ A+++ +D E++E M +
Sbjct: 331 GHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEH 390
Query: 343 WNTMITGYAQSGEITHARNLFDRMP 367
+ ++ ++G++ A N +MP
Sbjct: 391 YGCIVDMLGRAGKLAEAENFILKMP 415
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 126/281 (44%), Gaps = 39/281 (13%)
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
T + + + +A +F ++ + + +I ++ + + +M + +
Sbjct: 61 TFHKPTNLLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNI 120
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F ++ + + +G+Q H Q+V+ GF+ +V N+L+ MY CG + A F ++
Sbjct: 121 TFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQM 180
Query: 468 VDKDVISWNTMIAGYARHGFGKD-------------------------------ALMLFE 496
+DV+SW +M+AGY + G +D A+ LFE
Sbjct: 181 PFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 240
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGT---EYFYSMNRDYGVIPNSKHYTCMVDLL 553
MK G+ ++ MV ++S+C+H G +E G EY + +I T +VD+
Sbjct: 241 LMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILG----TALVDMY 296
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
R G +++A + + +P + D+ +W +++ ++G A
Sbjct: 297 WRCGEIEKAIRVFEELP-DKDSLSWSSIIKGLAVHGHAHKA 336
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/612 (38%), Positives = 364/612 (59%), Gaps = 25/612 (4%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++S Y G+L AR+VFD++P R+ S+N ++S Y R AR LFE +P D
Sbjct: 56 NTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 156 SWNTMLSGYAQNG--YADAARRIFDRM----LEKNEISWNGLLAAYV--QNGRIEEAC-- 205
S+N +++ A++G +A A R M N S+ L+A ++ R E
Sbjct: 116 SYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHG 175
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
++ S +V ++L+ + K +R DA+ +FD MP R+ VSWN++IT Y QN + E
Sbjct: 176 LVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 266 AQRLFEEAPV----KDVFTWTAMVSGYV-----QNGKVDEARMIFDAMPEKNTVSWNAMI 316
A LF E D T ++++S + G+ A M+ + V NA++
Sbjct: 236 ALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALV 295
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
Y + R AR +F++M +++ S +++TGYA+S + A+ +F +M + + I+W
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNV 355
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+IA YAQ+G E+++RLF+++KR + +VL+ C N+A L+LG+Q H ++K G
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEG 415
Query: 437 F------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKD 490
F E+ FVGN+L+ MY K GS+++ FE + +D +SWN MI GYA++G KD
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475
Query: 491 ALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
AL LFE M PD +TM+G+LSAC H+GLV++G YF+SM D+G+ P+ HYTCMV
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMV 535
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLLGRAG L EA+ L+ +MP EPD+ W +LLGACRL+ EL E A +FE++P+N+G
Sbjct: 536 DLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSG 595
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YVLLSN+YA G+W +V +VR M+DRGV K G SW+E+ K++ F D HP ++
Sbjct: 596 PYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNE 655
Query: 671 IYAYLEELEFKL 682
I+ L ++ ++
Sbjct: 656 IHNTLRIIQMEM 667
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 249/606 (41%), Gaps = 142/606 (23%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++T+ R G A VF+ +P R++ SYNA++S Y G+ D AR +F+ +P D
Sbjct: 56 NTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 125 SWNVMISGYVRNKSLSAARNL--FEMMPKRDVV----SWNTMLSG--------------- 163
S+N +++ R+ AA L M D V S+ + LS
Sbjct: 116 SYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHG 175
Query: 164 --------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
YA+ + ARR+FD M E+N +SWN L+ Y QNG + E
Sbjct: 176 LVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 204 ACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDE-VSWNTMI 254
A MLF + + + V+ +S+M + + + M +RD+ V N ++
Sbjct: 236 ALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALV 295
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
YA+ EA+ +F+ P + + + T++++GY ++ V++A+++F M EKN ++WN
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNV 355
Query: 315 MIAGYVQTKRMDMARELFEAM-----------------TCKNVASW-------------- 343
+IA Y Q + A LF + C N+A
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEG 415
Query: 344 --------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
N+++ Y ++G I +F+RM D +SW A+I GYAQ+G ++D
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L LF M E + VLS C +
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGH------------------------------- 504
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVIS-----WNTMIAGYARHGFGKDALMLFESMKTVGIK 504
G V+E F + + I+ + M+ R G K+A L M ++
Sbjct: 505 ----SGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMP---ME 557
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQ 563
PD + +L AC VE G ++ R + + P NS Y + ++ G+ E
Sbjct: 558 PDSVLWASLLGACRLHKNVELGE---WTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVF 614
Query: 564 NLMKNM 569
+ ++M
Sbjct: 615 RVRRSM 620
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 195/427 (45%), Gaps = 46/427 (10%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM 327
R+ + + F +VS Y + G++ +AR +FD +P +NT S+NA+++ Y + R D
Sbjct: 42 RILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDE 101
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
AR LFEA+ + S+N ++ A+ G G++
Sbjct: 102 ARALFEAIPDPDQCSYNAVVAALARHGR-----------------------------GHA 132
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
D+LR M LN F S LS CA G+Q+HG + + + +AL
Sbjct: 133 ADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSAL 192
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KC E+A F+ + +++V+SWN++I Y ++G +ALMLF M G PD+
Sbjct: 193 VDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDE 252
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMN-----RDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+T+ ++SAC+ +G + M RD V+ N+ +VD+ + GR EA
Sbjct: 253 VTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNA-----LVDMYAKCGRTWEA 307
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ + +MP + L G Y K+ E A V +M +N + +L YA +
Sbjct: 308 RCIFDSMPSRSIVSETSILTG----YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQN 363
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
G + ++ ++++ + T Y++ V N ++ D ++ ++ E F
Sbjct: 364 GEEEEAIRLFVQLKRDSIWP-THYTYGNVLNACG--NIADLQLGQQAHVHVLKEGFRFDF 420
Query: 683 KQDGFVY 689
+ V+
Sbjct: 421 GPESDVF 427
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 197/456 (43%), Gaps = 114/456 (25%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ +S E N+L+ + + RL DA+ +FD +P+R+ S+N +++ YA+ EA
Sbjct: 43 ILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEA 102
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGK--VDEARMIFDAM-------------------- 304
+ LFE P D ++ A+V+ ++G+ +A AM
Sbjct: 103 RALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACA 162
Query: 305 ------------------PEKNTVSW-NAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
P + V +A++ Y + +R + AR +F+AM +NV SWN+
Sbjct: 163 AEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNS 222
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+IT Y Q+G + A L LF+EM G +
Sbjct: 223 LITCYEQNGPVGEA-------------------------------LMLFVEMMAAGFSPD 251
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCG--------- 455
+SV+S CA LA+ G+Q+H +VK + NAL+ MY KCG
Sbjct: 252 EVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIF 311
Query: 456 ----------------------SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
+VE+A F ++V+K+VI+WN +IA YA++G ++A+
Sbjct: 312 DSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIR 371
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR-----DYGVIPNSKHYT- 547
LF +K I P T +L+AC + ++ G + + + D+G P S +
Sbjct: 372 LFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFG--PESDVFVG 429
Query: 548 -CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+VD+ + G +D+ + + M D +W A++
Sbjct: 430 NSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNAMI 464
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 165/382 (43%), Gaps = 89/382 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVF 115
++ WN IT + +NG AL +F M V+ ++++S RQV
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVH 275
Query: 116 DQMPQ-----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
M + D+V N ++ Y + AR +F+ MP R +VS ++L+GYA++
Sbjct: 276 AHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANV 335
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANW------------- 214
+ A+ +F +M+EKN I+WN L+AAY QNG EEA LF + + W
Sbjct: 336 EDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 215 -----------------------------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+V NSL+ ++K + D +F+RM R
Sbjct: 396 GNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 455
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFE------EAPVKDVFTWTAMVSGYVQNGKVDEARM 299
D VSWN MI GYAQN +A LFE E P D T ++S +G VDE R
Sbjct: 456 DNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENP--DSVTMIGVLSACGHSGLVDEGRR 513
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
F +M E + ++ +R+ + TC M+ ++G + A
Sbjct: 514 YFHSMTEDHGIT---------------PSRDHY---TC--------MVDLLGRAGHLKEA 547
Query: 360 RNLFDRMP-QHDCISWAAIIAG 380
L + MP + D + WA+++
Sbjct: 548 EELINDMPMEPDSVLWASLLGA 569
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 29/276 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRS----SVSYNAMIS--GYLLNGQLDPARQ 113
++ WNV I + +NG + A+ +F + R S +Y +++ G + + QL
Sbjct: 349 NVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAH 408
Query: 114 V--------FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
V FD P+ D+ N ++ Y++ S+ +FE M RD VSWN M+ GYA
Sbjct: 409 VHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYA 468
Query: 166 QNGYADAARRIFDRMLEKNE----ISWNGLLAAYVQNGRIEEACMLFESKANWEVVS--- 218
QNG A A +F+RML NE ++ G+L+A +G ++E F S ++
Sbjct: 469 QNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSR 528
Query: 219 --WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFE 271
+ ++ + L +A+ + + MP+ D V W +++ +N L E A RLFE
Sbjct: 529 DHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFE 588
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
P ++ + + + Y + GK E + +M ++
Sbjct: 589 LDP-QNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDR 623
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 124/295 (42%), Gaps = 27/295 (9%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
SP +L + NL+ + H +++K F+ N L+ Y + G + +A F+E
Sbjct: 21 SPLADLLRSAPNLSG---ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDE 77
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL--VE 524
I ++ S+N +++ YAR G +A LFE++ PD + +++A + G
Sbjct: 78 IPLRNTFSYNALLSAYARLGRPDEARALFEAIP----DPDQCSYNAVVAALARHGRGHAA 133
Query: 525 KGTEYFYSMNRDYGVIP----NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
+ +M+ D V+ S C + R G ++ L+ P D A
Sbjct: 134 DALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTG--EQVHGLVARSPHADDVHIRSA 191
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
L+ +Y K E E A V M N + L Y +G G+ + ++M
Sbjct: 192 LVD---MYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEM----- 243
Query: 641 KKVTGYSWLEVQ-NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
G+S EV + V + G E +++A++ + + +L+ D V + LV
Sbjct: 244 -MAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCD-RLRDD-MVLNNALV 295
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/818 (32%), Positives = 416/818 (50%), Gaps = 112/818 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-----SYNAMISGYLLNGQLDPARQV 114
++ QWN I+++ RN D L F M + + +Y +I + V
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 115 FDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ + LV N ++S Y + ++ A LF++MP+R++VSWN+M+ ++ NG++
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 171 DAARRIFDRMLEKN-----------------------EI-------SW------------ 188
+ + + M+E+N EI W
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 189 -NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF------------VKQKRLG-- 233
N L+ Y + G I A M+F+ N VVSWN+++GGF ++Q G
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744
Query: 234 ----DAKWIFDRMP-----------------------VRDEVSWNTMITGYAQNNYLAEA 266
D I + +P V +E+ N + YA+ L+ A
Sbjct: 745 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 804
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA---------MPEKNTVSWNAMIA 317
QR+F K V +W A++ G+ Q+ ++ R+ DA +P+ TV ++++
Sbjct: 805 QRVFHGIRSKTVNSWNALIGGHAQS---NDPRLSLDAHLQMKISGLLPDSFTVC--SLLS 859
Query: 318 GYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+ K + + +E+ + +++ + ++++ Y GE+ + LFD M +S
Sbjct: 860 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 919
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +I GY Q+G+ + +L +F +M YG +L V C+ L SL LG++ H +
Sbjct: 920 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 979
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K E F+ +L+ MY K GS+ ++ F + +K SWN MI GY HG K+A+
Sbjct: 980 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 1039
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LFE M+ G PDD+T +G+L+AC+H+GL+ +G Y M +G+ PN KHY C++D+L
Sbjct: 1040 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 1099
Query: 554 GRAGRLDEAQNLM-KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
GRAG+LD+A ++ + M E D W +LL +CR++ E+ EK A +FE+EPE Y
Sbjct: 1100 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 1159
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSNLYA G+W DV KVR +M + ++K G SW+E+ KV +F VG+ + I
Sbjct: 1160 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 1219
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
+ LE K+ + G+ T V HD+ EEEK LR HSEKLA+ YG++ G IRV
Sbjct: 1220 SLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVY 1279
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
KNLR+C DCHNA K ISK++ R I++RDN RFHHF G
Sbjct: 1280 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/583 (24%), Positives = 263/583 (45%), Gaps = 75/583 (12%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-- 146
R V +I+ Y + G D +R VFD + ++L WN +IS Y RN+ F
Sbjct: 472 RNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 531
Query: 147 -----EMMPK---------------------------------RDVVSWNTMLSGYAQNG 168
+++P DV N ++S Y +G
Sbjct: 532 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 591
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--------ESKANWEVVSWN 220
+ A ++FD M E+N +SWN ++ + NG EE+ +L + +V +
Sbjct: 592 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 651
Query: 221 SLMGGFVKQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
+++ +++ +G K W ++ V N ++ Y++ + AQ +F+ K
Sbjct: 652 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 711
Query: 277 DVFTWTAMVSGYV----QNGKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMA 328
+V +W MV G+ +G D R + D ++ T+ NA+ + ++ +
Sbjct: 712 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI-LNAVPVCFHES-FLPSL 769
Query: 329 REL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+EL + N N + YA+ G +++A+ +F + SW A+I G+AQS
Sbjct: 770 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 829
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
SL ++MK G + S+LS C+ L SL LGK++HG +++ E FV
Sbjct: 830 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 889
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
++L +Y CG + F+ + DK ++SWNT+I GY ++GF AL +F M GI+
Sbjct: 890 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 949
Query: 505 PDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTC-MVDLLGRAGRLDEA 562
I+M+ + ACS + G E + Y++ ++ + C ++D+ + G + ++
Sbjct: 950 LCGISMMPVFGACSLLPSLRLGREAHAYALKH---LLEDDAFIACSLIDMYAKNGSITQS 1006
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ + E A+W A++ YG LA++A ++ EM+
Sbjct: 1007 SKVFNGLK-EKSTASWNAMIMG---YGIHGLAKEAIKLFEEMQ 1045
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 202/494 (40%), Gaps = 90/494 (18%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWN----------VMISGYVRNKSLSAARNLFEM 148
IS + G LD + + + D S + +++ + K + R + ++
Sbjct: 405 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 464
Query: 149 MP-----KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+ + D V +++ YA G D +R +FD + KN WN ++++Y +N +E
Sbjct: 465 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 524
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY- 262
F E++S L+ D ++ +I A +
Sbjct: 525 VLETF-----IEMISTTDLL---------------------PDHFTYPCVIKACAGMSDV 558
Query: 263 ---LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA-- 317
LA + + V+DVF A+VS Y +G V +A +FD MPE+N VSWN+MI
Sbjct: 559 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 618
Query: 318 ---GYVQTKRM----------------DMARELFEAMTC---------KNVASW------ 343
G+ + + D+A + C K V W
Sbjct: 619 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 678
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
N ++ Y++ G IT+A+ +F + +SW ++ G++ G + + + +
Sbjct: 679 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 738
Query: 397 MKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M GE + T + + C + + L K+LH +K F V NA + Y KC
Sbjct: 739 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 798
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GS+ A F I K V SWN +I G+A+ + +L MK G+ PD T+ +L
Sbjct: 799 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 858
Query: 515 SACSHTGLVEKGTE 528
SACS + G E
Sbjct: 859 SACSKLKSLRLGKE 872
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQ 113
D + WN IT +++NG D AL VF M + +S + L L R+
Sbjct: 914 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 973
Query: 114 ----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ + D +I Y +N S++ + +F + ++ SWN M+ GY +G
Sbjct: 974 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 1033
Query: 170 ADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEA 204
A A ++F+ M +++++ G+L A +G I E
Sbjct: 1034 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 1072
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 346/572 (60%), Gaps = 30/572 (5%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV---- 275
N+L+ + K A +FD MP RD ++W +++T Q N + +F
Sbjct: 110 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 169
Query: 276 -KDVFTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
D F ++A+V G +D R + + + V ++++ Y + ++ A+
Sbjct: 170 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 229
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
+F+++ KN SW M++GYA+SG A LF +P + SW A+I+G+ QSG ++
Sbjct: 230 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 289
Query: 391 LRLFIEMKRYGER---LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+F EM+R ER L+ +S++ CANLA+ G+Q+HG NAL
Sbjct: 290 FSVFTEMRR--ERVDILDPLVLSSIVGACANLAASIAGRQVHG--------------NAL 333
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KC V A F + +DV+SW ++I G A+HG + AL L++ M + G+KP++
Sbjct: 334 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 393
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T VG++ ACSH G VEKG E F SM +DYG+ P+ +HYTC++DLLGR+G LDEA+NL+
Sbjct: 394 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 453
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAE-VIFEMEPENAGMYVLLSNLYAASGRWG 626
MPF PD TW ALL AC+ G+ ++ + A+ ++ + ++ Y+LLSN+YA++ WG
Sbjct: 454 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 513
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK-QD 685
VS+ R K+ + V+K G+S +EV+ + F G+T HP K+ I+ L++LE +++ ++
Sbjct: 514 KVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRN 573
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+V T +LHD+ E+EKE +L +HSE+ AVAYG+L G PIR++KNLRVC DCH +
Sbjct: 574 GYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVL 633
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
KHIS+I R II+RD R+HHF GG CSC D+
Sbjct: 634 KHISEITEREIIVRDATRYHHFKGGKCSCNDF 665
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 184/375 (49%), Gaps = 18/375 (4%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA-----RRIFDRML 181
N +++ Y + + S A +F+ MP RD ++W ++L+ Q + L
Sbjct: 110 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 169
Query: 182 EKNEISWNGLLAAYVQNGRIEEA----CMLFESK-ANWEVVSWNSLMGGFVKQKRLGDAK 236
++ ++ L+ A G I+ C S+ AN EVV +SL+ + K L AK
Sbjct: 170 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAK 228
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+FD + V++ +SW M++GYA++ EA LF PVK++++WTA++SG+VQ+GK E
Sbjct: 229 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 288
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
A +F M + + ++ + ++A A N +I YA+ ++
Sbjct: 289 AFSVFTEMRRERVDILDPLVLSSIVGACANLA-----ASIAGRQVHGNALIDMYAKCSDV 343
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A+++F RM D +SW ++I G AQ G +E +L L+ +M +G + N F ++ C
Sbjct: 344 IAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC 403
Query: 417 ANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVIS 474
+++ +E G++L + K G LL + + G ++EA + + D +
Sbjct: 404 SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 463
Query: 475 WNTMIAGYARHGFGK 489
W +++ R G G+
Sbjct: 464 WAALLSACKRQGRGQ 478
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 168/379 (44%), Gaps = 55/379 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSY--------NAMISGYLLN----------- 105
N + + + G AL VF+ MP R +++ A +SG L+
Sbjct: 110 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 169
Query: 106 -----------------GQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKSLSAARN 144
G +D RQV D V + ++ Y + L++A+
Sbjct: 170 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 229
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+F+ + ++ +SW M+SGYA++G + A +F + KN SW L++ +VQ+G+ EA
Sbjct: 230 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 289
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+F V + L+ + A I R +V N +I YA+ + +
Sbjct: 290 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR-----QVHGNALIDMYAKCSDVI 344
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYV 320
A+ +F +DV +WT+++ G Q+G+ ++A ++D M + N V++ +I
Sbjct: 345 AAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACS 404
Query: 321 QTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISW 374
++ RELF++MT ++ + ++ +SG + A NL MP D +W
Sbjct: 405 HVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTW 464
Query: 375 AAIIAGYAQSGYSEDSLRL 393
AA+++ + G + +R+
Sbjct: 465 AALLSACKRQGRGQMGIRI 483
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 43/279 (15%)
Query: 63 QWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD 122
W ++ + ++G + AL +F +P ++ S+ A+ISG++ +G+ A VF +M +
Sbjct: 241 SWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 300
Query: 123 L--------------------------VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
+ V N +I Y + + AA+++F M RDVVS
Sbjct: 301 VDILDPLVLSSIVGACANLAASIAGRQVHGNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 360
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
W +++ G AQ+G A+ A ++D M ++ NE+++ GL+ A G +E+ LF+S
Sbjct: 361 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 420
Query: 213 N-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNY---- 262
+ + L+ + L +A+ + MP DE +W +++ +
Sbjct: 421 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 480
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQN---GKVDEAR 298
+ A L +KD T+ + + Y GKV EAR
Sbjct: 481 IRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 519
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 115/251 (45%), Gaps = 28/251 (11%)
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L +F + Y R+NR+ L K LH +VK+G C + N L+ +
Sbjct: 70 LFVFFDFGSYFSRMNRT--------------LTTAKALHAHIVKLGIVQCCPLANTLVNV 115
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF-GKDALMLFESMKTVGIKPDDIT 509
Y KCG+ A F+E+ +D I+W +++ + GK + + G++PDD
Sbjct: 116 YGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFV 175
Query: 510 MVGILSACSHTGLVEKGTE----YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
++ AC++ G ++ G + + S + V+ +S +VD+ + G L+ A+ +
Sbjct: 176 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSS-----LVDMYAKCGLLNSAKAV 230
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
++ + + +W A++ Y K+ E+A E+ + +N + L + + SG+
Sbjct: 231 FDSIRVK-NTISWTAMVSG---YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 286
Query: 626 GDVSKVRLKMR 636
+ V +MR
Sbjct: 287 LEAFSVFTEMR 297
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/697 (35%), Positives = 384/697 (55%), Gaps = 50/697 (7%)
Query: 28 SPANTNPYP---SKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF 84
+P N P+ S + L + N S + K + + N IT RNGC A +F
Sbjct: 13 TPLNFKPFFFNFSTQILSKRGNFDSATRQKSSKF--LVYCNSQITKLGRNGCIKEAESIF 70
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
N MP +++VS+ A+++ Y N +++ AR+VF+++P ++ S+N MI+ Y R + A
Sbjct: 71 NRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFE 130
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
LF MP+R+ VS+ TM++G+ G D A ++ + +S N L+ Y + GR+E+A
Sbjct: 131 LFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHRE--KPVIVSSNVLINGYSKVGRVEDA 188
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+F+ A +VVSW+S++ G + ++ +A+ +FD+MP R+ V+W MI GY + N+L
Sbjct: 189 VRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLK 248
Query: 265 EAQRLF-----EEAPVK----------------------------------DVFTWTAMV 285
+ LF E V D + +++
Sbjct: 249 DGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSII 308
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+ Y + +D A FD M +K+ V+WN++I GYVQ+ ++ A LFE M K+V SW T
Sbjct: 309 TMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTT 368
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I G+A G I LF MP+ D I+W A+I+G E + FI+M + + N
Sbjct: 369 LICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPN 428
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+ VLS A++A L G Q+H + K+ E + N+L+ MY KCG+V++A F
Sbjct: 429 AFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFY 488
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
I +V+++NT+I G A++G GK+AL +F M+ + P+ IT +G+LSAC H GLVE+
Sbjct: 489 YIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEE 548
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G YF M Y + P HY CMVDLL RAG DEA +L+ +MPF+P WGA+LGA
Sbjct: 549 GRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGAS 608
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
+ + ++AE AA+ +FE+EP +A YV+LSNL++ SG +RL + RG+KK G
Sbjct: 609 WTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPG 668
Query: 646 YSWLEVQNKVHTFSVG----DTLHPEKDRIYAYLEEL 678
SW+ ++++VH F G + + IYA EE+
Sbjct: 669 CSWIILKDEVHLFHAGHQSIKNIKEMTEIIYALAEEV 705
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/665 (36%), Positives = 369/665 (55%), Gaps = 33/665 (4%)
Query: 125 SWNVMISGYVRNKSLSA--ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
S N +I+ + SL A ++F + DV++WN+ML + + A + + MLE
Sbjct: 12 SLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
++ + + ++ +L E K L G VK M
Sbjct: 72 RSR----NVPDRFTFPSLLKGCALLLEFKVG------KVLHGQVVKY------------M 109
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
D T++ YA L A+ LFE ++ WT+M+SGY++N +EA +++
Sbjct: 110 LHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYK 169
Query: 303 AMPEK----NTVSWNAMIAGYVQTKRMDMAREL---FEAMTCKNVASWNT-MITGYAQSG 354
M E + V+ +++ + K + + +L M K A + ++ YA+ G
Sbjct: 170 KMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCG 229
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVL 413
++ AR +FD++ D +W+A+I GY ++ S ++L+LF E+ R N +V+
Sbjct: 230 DLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVI 289
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S CA L LE G+ +H + + + N+L+ M+ KCG ++ A F+ + KD+I
Sbjct: 290 SACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLI 349
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
SWN+M+ G+A HG G++AL F M+T ++PD+IT +G+L+ACSH GLV++G + FY +
Sbjct: 350 SWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEI 409
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
YGV S+HY CMVDLL RAG L EA+ ++ MP +PD A WG++LGACR+Y EL
Sbjct: 410 EALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLEL 469
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
E+AA + ++EP N G+Y+LLSN+YA W +V KVR M ++G++K G S + + N
Sbjct: 470 GEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDN 529
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
H+F GD HPE I L ++ KLK G+V T VL ++ + +KE + HSEK
Sbjct: 530 IAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEK 589
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+ YG+L G I ++KNLRVC DCH IK +SKI R I LRD NRFHHF GSCS
Sbjct: 590 LALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCS 649
Query: 774 CGDYW 778
C DYW
Sbjct: 650 CRDYW 654
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 176/378 (46%), Gaps = 31/378 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS-----VSYNAMISGYLLNGQLDPAR 112
+ D+ WN + + + AL + M RS ++ +++ G L + +
Sbjct: 40 ELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGK 99
Query: 113 ----QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
QV M DL +++ Y L +AR LFE M R+ V W +M+SGY +N
Sbjct: 100 VLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNH 159
Query: 169 YADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWN 220
+ A ++ +M E +E++ L++A + + L E V +
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGS 219
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP-----V 275
+L+ + K L A+ +FD++ +D +W+ +I GY +NN EA +LF E
Sbjct: 220 ALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMR 279
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK---NTVSW-NAMIAGYVQTKRMDMAREL 331
+ T A++S Q G ++ R + D + ++VS N++I + + +D A+ +
Sbjct: 280 PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRI 339
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYS 387
F++M+ K++ SWN+M+ G+A G A F M Q D I++ ++ + +G
Sbjct: 340 FDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLV 399
Query: 388 EDSLRLFIEMKR-YGERL 404
++ +LF E++ YG RL
Sbjct: 400 QEGKKLFYEIEALYGVRL 417
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 165/360 (45%), Gaps = 32/360 (8%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLV 124
+M C D SA +F M R+ V + +MISGY+ N + A ++ +M + D V
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181
Query: 125 SWNVMISGYVRNKSLSAARNLF----EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ ++S K L L EM K V + +++ YA+ G AR++FD++
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKL 241
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN--SLMGGFVKQKRLGD---A 235
+K+ +W+ L+ YV+N R EA LF A + N +++ +LGD
Sbjct: 242 SDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301
Query: 236 KWIFD---RMPVRDEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
+W+ D R VS N++I +++ + A+R+F+ KD+ +W +MV+G+ +
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALH 361
Query: 292 GKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELF---EAMTCKNVAS-- 342
G EA F M + + +++ ++ + ++LF EA+ + S
Sbjct: 362 GLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEH 421
Query: 343 WNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMK 398
+ M+ ++G + AR MP Q D W +++ Y E++ R ++++
Sbjct: 422 YGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLE 481
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/816 (31%), Positives = 412/816 (50%), Gaps = 98/816 (12%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNG-QLDPAR 112
+ D+ WN I+ + G A+ +F + R +SV+ +++ +G AR
Sbjct: 296 ELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAAR 355
Query: 113 Q----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQN 167
+ +++ RD+V N +IS Y + SAA +F + K DV+SWNTML
Sbjct: 356 KFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDR 415
Query: 168 GYADAARRIFDRML----EKNEISWNGLLAAYVQN-----GRIEEACMLFESKANWEVVS 218
F ML + N++S+ +L A + GR + +L + E
Sbjct: 416 KSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSV 475
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPV--RDEVSWNTMITGYAQNNYLAEA----QRLFEE 272
L+ + K + +A+ +F MP+ R V+WN M+ YAQN+ EA + +
Sbjct: 476 ATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQG 535
Query: 273 APVKDVFTWT-------------------------------AMVSGYVQNGKVDEARMIF 301
+ D ++T A++S + + ++++AR +F
Sbjct: 536 GVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVF 595
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TC------- 337
D M + VSW AM++ + + LF M TC
Sbjct: 596 DEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLG 655
Query: 338 ---------------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
++A N ++ Y+ G+ A + F+ M D +SW + A YA
Sbjct: 656 LGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYA 715
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
Q+G +++++ LF M+ G + ++ F++ L+ A + GK HG + G ++
Sbjct: 716 QAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVS 775
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
V L+ +Y KCG ++EA F V+ N +I A+HGF ++A+ +F M+ G
Sbjct: 776 VATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEG 835
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
++PD T+V I+SAC H G+VE+G F +M +G+ P +HY C VDLLGRAG+L+ A
Sbjct: 836 VRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHA 895
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ +++ MPFE + W +LLG C+L G EL E+ A+ I E++P N+ +V+LSN+Y A+
Sbjct: 896 EQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCAT 955
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
G+W D R K+ D+ VK G SWLE+ +VH F GD HP+ D IY L++LE +
Sbjct: 956 GKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLM 1015
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
++ G+ L D +E KE L YHSE++A+A+G+++ P ++++KNLRVC DCH
Sbjct: 1016 RRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCH 1072
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A K+IS I+GR II+RD+ RFHHFS G+CSC D W
Sbjct: 1073 TATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 224/507 (44%), Gaps = 74/507 (14%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
LE++ N L+ YV+ G +EEA +F VVSW +L+ + A +F
Sbjct: 56 LEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFR 115
Query: 241 RMPVRDEVSWNT-----MITGYAQNNYLAEAQRL--------FEEAPVKDVFTWTAMVSG 287
M + + N+ M+ A + LA + + E AM++
Sbjct: 116 TMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINM 175
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR-----MDMARELFEAMTCKNVAS 342
Y + G ++A +F +PEK+ VSW AM Y Q +R + + RE+ NV +
Sbjct: 176 YAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVIT 235
Query: 343 W--------------------------------NTMITGYAQSGEITHARNLFDRMPQH- 369
+ N +I Y + G+ A +F M
Sbjct: 236 FITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQ 295
Query: 370 --DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-- 425
D +SW A+I+ ++G D++ +F ++ G R N ++L+ A + ++ G
Sbjct: 296 ELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAA-SGVDFGAA 354
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNTMI-AGYA 483
++ HG++ + G+ VGNA++ MY KCG A+ F I K DVISWNTM+ A
Sbjct: 355 RKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASED 414
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE---YFYSMNRDYGVI 540
R FGK + F M GI P+ ++ + IL+ACS++ ++ G + + RDY
Sbjct: 415 RKSFGK-VVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY--- 470
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA-ATWGALLGACRLYGKTELAEKAAE 599
S T +V + G+ G + EA+ + K MP + TW +LGA Y + + +++A
Sbjct: 471 VESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFG 527
Query: 600 VIFEM-----EPENAGMYVLLSNLYAA 621
+ EM P+ +LS+ Y +
Sbjct: 528 ALMEMLQGGVLPDALSFTSVLSSCYCS 554
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/575 (23%), Positives = 246/575 (42%), Gaps = 74/575 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL--SAARNLFEMMPK-- 151
NAMI+ Y G + A VF +P++D+VSW M Y + + A R EM+ +
Sbjct: 170 NAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPL 229
Query: 152 -RDVVSWNTMLSGYAQNGYADAA---RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
+V+++ T L A D + + L + ++ N L+ Y + G E A +
Sbjct: 230 APNVITFITALG--ACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGV 287
Query: 208 FE---SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQN 260
F+ S+ ++VSWN+++ V+ R GDA IF R+ + + V+ T++ A +
Sbjct: 288 FKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAAS 347
Query: 261 NYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNA 314
A R F E ++DV A++S Y + G A +F + K + +SWN
Sbjct: 348 GVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNT 407
Query: 315 MIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN------------- 344
M+ K F M C N + +
Sbjct: 408 MLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467
Query: 345 ----------TMITGYAQSGEITHARNLFDRM--PQHDCISWAAIIAGYAQSGYSEDSLR 392
+++ Y + G I A +F M P ++W ++ YAQ+ S+++
Sbjct: 468 RDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
+EM + G + FTSVLS+C S E + L +++ G+ + C + AL+ M+
Sbjct: 528 ALMEMLQGGVLPDALSFTSVLSSC--YCSQE-AQVLRMCILESGYRSAC-LETALISMHG 583
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+C +E+A F+E+ DV+SW M++ A + K+ LF M+ G+ PD T+
Sbjct: 584 RCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLAT 643
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
L C + + G + ++ + G+ + ++++ G EA + + M
Sbjct: 644 TLDTCLDSTTLGLG-KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR 702
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
D +W + A Y + LA++A + M+ E
Sbjct: 703 -DLVSWNIMSAA---YAQAGLAKEAVLLFRHMQLE 733
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 7/181 (3%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+T++L +C + L GK+ H + G E F+GN L+ MY +CGS+EEA+ F ++
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGLVEKGT 527
+++V+SW +I+ A+ G A LF +M P+ T+V +L+AC+++ + G
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 528 EYFYSMNRDYGVIPNSKHYT----CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
++M + G+ S T M+++ + G ++A + +P E D +W A+ G
Sbjct: 148 S-IHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIP-EKDVVSWTAMAG 205
Query: 584 A 584
A
Sbjct: 206 A 206
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/694 (34%), Positives = 371/694 (53%), Gaps = 42/694 (6%)
Query: 100 SGYLLNGQLDPARQVFDQMPQR--DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
S YL G+ + R D+ N +I+ YV+ AR +F++MP+R+VVSW
Sbjct: 44 SSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSW 103
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV-----QNGRIEEACMLFESKA 212
M+ GY +G+ ++F M+ +E N +A V +GRIEE
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEG-------- 155
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
G F+K + E NT++ Y+ + EA R+ ++
Sbjct: 156 -------KQFHGCFLKSGLMSH------------EFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMA 328
P D+ +++ +SGY++ G E + M +++ V N ++ + +++A
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLA 256
Query: 329 RELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
R++ M V + +I Y + G++ +A+ +FD + + I+ Y Q
Sbjct: 257 RQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQD 316
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
E++L LF +M N F L++ A L+ L+ G LHG ++K G+ VG
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVG 376
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NAL+ MY K GS+E+A AF + +D+++WNTMI G++ HG G++ L F+ M G
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEI 436
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
P+ IT +G+L ACSH G VE+G YF + + + V P+ +HYTC+V LL +AG +A++
Sbjct: 437 PNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAED 496
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
M+ P E D W ALL AC + L +K AE P ++G+YVLLSN++A S
Sbjct: 497 FMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSRE 556
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W V++VR M RGVKK G SW+ ++N+ H F + HPE IYA ++E+ K++
Sbjct: 557 WEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRP 616
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
G+ V HDV EE++E L YHSEKLAVAYG++ P P+ V KN+R+C+DCH+A
Sbjct: 617 LGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSA 676
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IK ISKI R I++RD+NRFHHF G CSC DYW
Sbjct: 677 IKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 208/500 (41%), Gaps = 52/500 (10%)
Query: 26 LQSPANTNPYPSKKTLKRHL---NSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALH 82
L+ AN++ + +++ HL N SR K D+ Q N I +++ G A
Sbjct: 38 LKVCANSSYLRTGESIHGHLIVTNQSSRAK-------DVYQINSLINLYVKCGETVRARK 90
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
VF+ MP R+ VS+ AM+ GY +G ++F M D N ++ V S+
Sbjct: 91 VFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSG 150
Query: 143 R-----NLFEMMPKRDVVSW----NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
R K ++S NT++ Y+ A R+ D + + ++ L+
Sbjct: 151 RIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 194 AYVQNGRIEEACMLFESKANWEVV----SWNSLMGGFVKQKRLGDAKWIFDRMP---VRD 246
Y++ G +E + A ++V ++ S + + L A+ I RM
Sbjct: 211 GYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNS 270
Query: 247 EV-SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
EV + +I Y + + AQR+F+ +++ T ++ Y Q+ +EA +F M
Sbjct: 271 EVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 306 EKNT--------VSWNAMIAGYVQTKRMDMARELFEAMTCKN-VASWNTMITGYAQSGEI 356
K +S N+ IA K D+ L +N V N ++ YA+SG I
Sbjct: 331 TKEVPPNEYTFAISLNS-IAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSI 389
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR F M D ++W +I G++ G + L F M GE NR F VL C
Sbjct: 390 EDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQAC 449
Query: 417 ANLASLELGKQLHGQLVKVGFEA-------GCFVGNALLVMYCKCGSVEEAYHAFEEI-V 468
+++ +E G QL+K F C VG + K G ++A +
Sbjct: 450 SHVGFVEQGLYYFNQLMK-KFNVQPDLQHYTCIVG-----LLSKAGMFKDAEDFMRTAPI 503
Query: 469 DKDVISWNTMI-AGYARHGF 487
+ DV++W ++ A Y R F
Sbjct: 504 EWDVVAWRALLNACYVRRNF 523
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA---GCFVGNALLVMYCKCGSVE 458
+RLN +L CAN + L G+ +HG L+ + + N+L+ +Y KCG
Sbjct: 32 DRLNE-----LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETV 86
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK-TVGIKPDDITMVGILSAC 517
A F+ + +++V+SW M+ GY GF + L LF+SM + +P++ + +C
Sbjct: 87 RARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSC 146
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
S +G +E+G + F+ G++ + +V + EA ++ ++P+ +
Sbjct: 147 SSSGRIEEGKQ-FHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
AL G Y + ++ AEV+ M E+
Sbjct: 206 SSALSG----YLECGAFKEGAEVLRRMAKED 232
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 19 HTQSINRLQSPANTNPYPSKKTLKRHLN--SKSRNKPKPAGDWD--IRQWNVAITTHMRN 74
+T + N + + + Y K+ + LN SK K P ++ I ++A + +++
Sbjct: 297 NTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKH 356
Query: 75 GCCDSALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG 132
G LH V S R + NA+++ Y +G ++ AR+ F M RD+V+WN MI G
Sbjct: 357 G---DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICG 413
Query: 133 YVRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
+ + F+ M P R +++ +L + G+ + F+++++K +
Sbjct: 414 FSHHGLGREGLEAFDRMMIAGEIPNR--ITFIGVLQACSHVGFVEQGLYYFNQLMKKFNV 471
Query: 187 S-----WNGLLAAYVQNGRIEEA-CMLFESKANWEVVSWNSLMGG-FVKQK-RLG 233
+ ++ + G ++A + + W+VV+W +L+ +V++ RLG
Sbjct: 472 QPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLG 526
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/523 (40%), Positives = 325/523 (62%), Gaps = 11/523 (2%)
Query: 266 AQRLFEEAPVKDVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
A+RLF P D F + +++ G+ + + RM+F P+ N ++ ++I
Sbjct: 142 ARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSN-YTFTSVIKACA 200
Query: 321 QTKRMDMARELF-EAMTC---KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
+ + +E+ M C ++ +I YA++ ++ A+ +FD MPQ I+W +
Sbjct: 201 DLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNS 260
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I+GY Q+G ++S+ LF M G + + + S+LS+C+ L +L+ G LH G
Sbjct: 261 LISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG 320
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
F+ +G +L+ MY +CG+V +A F+ + +++V++W MI+GY HG+G+ A+ LF
Sbjct: 321 FDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFT 380
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M+ G +P++IT V +LSAC+H+GL++ G F SM YG++P +H CMVD+ GRA
Sbjct: 381 EMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRA 440
Query: 557 GRLDEAQNLMKN-MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
G L++A +K +P EP A W ++LGACR++ +L K AE + +EPEN G YV+L
Sbjct: 441 GLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVML 500
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
SN+YA +GR V VR M R +KK GYS +E+ K + FS+GD HP+ + IY YL
Sbjct: 501 SNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYL 560
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
+EL + + G+V + + ++HD+ EEE+++ LRYHSEKLA+A+G+L G IR++KNL
Sbjct: 561 DELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNL 620
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+CEDCH+AIKHIS I R II+RD RFHHF GSCSC DYW
Sbjct: 621 RICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 154/297 (51%), Gaps = 11/297 (3%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I+ +G IT+AR LF +P D + +++ ++ G+S D++ + M G +
Sbjct: 129 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 188
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
FTSV+ CA+L++L LGK++H ++ G+ + +V AL+ +Y K ++ A F+
Sbjct: 189 NYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFD 248
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ + +I+WN++I+GY ++G ++++ LF M G +PD T+V +LS+CS G ++
Sbjct: 249 AMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 308
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G + + G N T ++++ R G + +A+ + +M E + TW A++
Sbjct: 309 GC-WLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVTWTAMISG- 365
Query: 586 RLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
YG +A E+ EM P N +LS A SG D +V M++
Sbjct: 366 --YGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC-AHSGLIDDGRRVFSSMKE 419
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 102/197 (51%), Gaps = 12/197 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D+ +I+ Y + + A+ +F+ MP+R +++WN+++SGY QNG + +F M+
Sbjct: 223 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 282
Query: 182 EK----NEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLG 233
E + + LL++ Q G ++ C L + + + VV SL+ + + +
Sbjct: 283 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 342
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYV 289
A+ +FD M R+ V+W MI+GY + Y +A LF E P + T+ A++S
Sbjct: 343 KAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 402
Query: 290 QNGKVDEARMIFDAMPE 306
+G +D+ R +F +M E
Sbjct: 403 HSGLIDDGRRVFSSMKE 419
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 43/174 (24%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNG-----------------QLDPARQV-----FDQ 117
A VF++MP+R+ +++N++ISGY NG Q D A V Q
Sbjct: 243 AKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQ 302
Query: 118 MPQRDLVSW------------NV-----MISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
+ D W NV +I+ Y R ++S AR +F+ M +R+VV+W M
Sbjct: 303 LGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAM 362
Query: 161 LSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFES 210
+SGY +GY A +F M N I++ +L+A +G I++ +F S
Sbjct: 363 ISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSS 416
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 54/259 (20%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+Q+H ++ G + L+ + C GS+ A F + + D +++++ ++
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 167
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSK 544
GF D ++ + M G + T ++ AC+ + G E + + M YG S
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYG----SD 223
Query: 545 HYT--CMVDLLGRAGRLDEAQNLMKNMP-------------------------------- 570
Y ++ L +A + A+ + MP
Sbjct: 224 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 283
Query: 571 --FEPDAATWGALLGACRLYGKTE----LAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
F+PD+AT +LL +C G + L + A F++ N + L N+Y R
Sbjct: 284 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDL---NVVLGTSLINMYT---R 337
Query: 625 WGDVSKVRL---KMRDRGV 640
G+VSK R M++R V
Sbjct: 338 CGNVSKAREVFDSMKERNV 356
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 27/125 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ I + R G A VF+SM R+ V++ AMISGY ++G A ++F +
Sbjct: 322 DLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTE 381
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M P+ + +++ +LS A +G D RR+F
Sbjct: 382 MRAYG---------------------------PRPNNITFVAVLSACAHSGLIDDGRRVF 414
Query: 178 DRMLE 182
M E
Sbjct: 415 SSMKE 419
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/523 (40%), Positives = 325/523 (62%), Gaps = 11/523 (2%)
Query: 266 AQRLFEEAPVKDVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
A+RLF P D F + +++ G+ + + RM+F P+ N ++ ++I
Sbjct: 78 ARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSN-YTFTSVIKACA 136
Query: 321 QTKRMDMARELF-EAMTC---KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
+ + +E+ M C ++ +I YA++ ++ A+ +FD MPQ I+W +
Sbjct: 137 DLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNS 196
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I+GY Q+G ++S+ LF M G + + + S+LS+C+ L +L+ G LH G
Sbjct: 197 LISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG 256
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
F+ +G +L+ MY +CG+V +A F+ + +++V++W MI+GY HG+G+ A+ LF
Sbjct: 257 FDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFT 316
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M+ G +P++IT V +LSAC+H+GL++ G F SM YG++P +H CMVD+ GRA
Sbjct: 317 EMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRA 376
Query: 557 GRLDEAQNLMKN-MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
G L++A +K +P EP A W ++LGACR++ +L K AE + +EPEN G YV+L
Sbjct: 377 GLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVML 436
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
SN+YA +GR V VR M R +KK GYS +E+ K + FS+GD HP+ + IY YL
Sbjct: 437 SNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYL 496
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
+EL + + G+V + + ++HD+ EEE+++ LRYHSEKLA+A+G+L G IR++KNL
Sbjct: 497 DELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNL 556
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+CEDCH+AIKHIS I R II+RD RFHHF GSCSC DYW
Sbjct: 557 RICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 154/297 (51%), Gaps = 11/297 (3%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I+ +G IT+AR LF +P D + +++ ++ G+S D++ + M G +
Sbjct: 65 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 124
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
FTSV+ CA+L++L LGK++H ++ G+ + +V AL+ +Y K ++ A F+
Sbjct: 125 NYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFD 184
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ + +I+WN++I+GY ++G ++++ LF M G +PD T+V +LS+CS G ++
Sbjct: 185 AMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 244
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G + + G N T ++++ R G + +A+ + +M E + TW A++
Sbjct: 245 GC-WLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVTWTAMISG- 301
Query: 586 RLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
YG +A E+ EM P N +LS A SG D +V M++
Sbjct: 302 --YGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC-AHSGLIDDGRRVFSSMKE 355
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 102/197 (51%), Gaps = 12/197 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D+ +I+ Y + + A+ +F+ MP+R +++WN+++SGY QNG + +F M+
Sbjct: 159 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 218
Query: 182 EK----NEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLG 233
E + + LL++ Q G ++ C L + + + VV SL+ + + +
Sbjct: 219 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 278
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYV 289
A+ +FD M R+ V+W MI+GY + Y +A LF E P + T+ A++S
Sbjct: 279 KAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 338
Query: 290 QNGKVDEARMIFDAMPE 306
+G +D+ R +F +M E
Sbjct: 339 HSGLIDDGRRVFSSMKE 355
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 43/174 (24%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNG-----------------QLDPARQV-----FDQ 117
A VF++MP+R+ +++N++ISGY NG Q D A V Q
Sbjct: 179 AKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQ 238
Query: 118 MPQRDLVSW------------NV-----MISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
+ D W NV +I+ Y R ++S AR +F+ M +R+VV+W M
Sbjct: 239 LGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAM 298
Query: 161 LSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFES 210
+SGY +GY A +F M N I++ +L+A +G I++ +F S
Sbjct: 299 ISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSS 352
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 105/269 (39%), Gaps = 58/269 (21%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+Q+H ++ G + L+ + C GS+ A F + + D +++++ ++
Sbjct: 44 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 103
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSK 544
GF D ++ + M G + T ++ AC+ + G E + + M YG S
Sbjct: 104 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYG----SD 159
Query: 545 HYT--CMVDLLGRAGRLDEAQNLMKNMP-------------------------------- 570
Y ++ L +A + A+ + MP
Sbjct: 160 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 219
Query: 571 --FEPDAATWGALLGACRLYGKTE----LAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
F+PD+AT +LL +C G + L + A F++ N + L N+Y R
Sbjct: 220 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDL---NVVLGTSLINMYT---R 273
Query: 625 WGDVSKVRL---KMRDRGV----KKVTGY 646
G+VSK R M++R V ++GY
Sbjct: 274 CGNVSKAREVFDSMKERNVVTWTAMISGY 302
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 27/125 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ I + R G A VF+SM R+ V++ AMISGY ++G A ++F +
Sbjct: 258 DLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTE 317
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M P+ + +++ +LS A +G D RR+F
Sbjct: 318 MRAYG---------------------------PRPNNITFVAVLSACAHSGLIDDGRRVF 350
Query: 178 DRMLE 182
M E
Sbjct: 351 SSMKE 355
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/435 (46%), Positives = 292/435 (67%), Gaps = 12/435 (2%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
++M+ YA+ GEI AR +FD MP + +SW+ +I GY+Q G E++LRLF +
Sbjct: 49 SSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLD 108
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+N F+SV+ C N LELGKQ+HG +K +++ FVG++L+ +Y KCG +E+AY
Sbjct: 109 VNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLV 168
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F EI +++ WN M+ A+H + A LF+ M+ VG+KP+ IT + +L ACSH GLV
Sbjct: 169 FHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLV 228
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
EKG ++++ + ++YG+ P ++HY MVDLLGRAG+L +A +++K MP EP + WGALL
Sbjct: 229 EKG-QFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLT 287
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
CR++G TELA A+ +FE+ P + +A+GR+ + ++ R +RD+GVKK
Sbjct: 288 GCRIHGDTELASFVADRVFELGP-----------VSSAAGRYEEAARARKMLRDQGVKKE 336
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
TG SW+E N++HTF+ GD HP IY LEEL ++++ G++ T VL +V EEK
Sbjct: 337 TGLSWVEEGNRIHTFAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEK 396
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
+RYHSE+LA+A+G++S P RPIRVMKNLRVC DCH AIK +SK GR II+RDNNR
Sbjct: 397 NQTIRYHSERLAIAFGLISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNR 456
Query: 764 FHHFSGGSCSCGDYW 778
FH F G+CSC DYW
Sbjct: 457 FHRFEDGNCSCRDYW 471
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
G R + F S C L+ ++G+ +H VK G++ FVG++++ MY KCG + +A
Sbjct: 5 GVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDA 64
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F+E+ D++V+SW+ MI GY++ G ++AL LF+ + +D T ++ C ++
Sbjct: 65 RKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNS 124
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
L+E G + + + +S + ++ L + G +++A + +P + W A
Sbjct: 125 TLLELGKQ-IHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIR-NLGMWNA 182
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGM----YVLLSNLYAAS 622
+L AC + T EKA ++ +M E GM L LYA S
Sbjct: 183 MLIACAQHAHT---EKAFDLFKQM--EGVGMKPNFITFLCVLYACS 223
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 42/251 (16%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE--- 333
DVF ++MV Y + G++ +AR +FD MP++N VSW+ MI GY Q + A LF+
Sbjct: 44 DVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQAL 103
Query: 334 --------------AMTCKNVASW----------------------NTMITGYAQSGEIT 357
C N +++I+ Y++ G I
Sbjct: 104 IEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIE 163
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F +P + W A++ AQ ++E + LF +M+ G + N F VL C+
Sbjct: 164 DAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACS 223
Query: 418 NLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS-W 475
+ +E G Q + +L+K G E G +++ + + G +++A +++ + S W
Sbjct: 224 HAGLVEKG-QFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVW 282
Query: 476 NTMIAGYARHG 486
++ G HG
Sbjct: 283 GALLTGCRIHG 293
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+V +S++ + K +GDA+ +FD MP R+ VSW+ MI GY+Q EA RLF++A
Sbjct: 44 DVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQAL 103
Query: 275 VKDV----FTWTAMV-----SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
++D+ FT++++V S ++ GK + + ++ +++I+ Y + +
Sbjct: 104 IEDLDVNDFTFSSVVRVCGNSTLLELGKQIHG-LCLKTSYDSSSFVGSSLISLYSKCGVI 162
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGY 381
+ A +F + +N+ WN M+ AQ A +LF +M + + I++ ++
Sbjct: 163 EDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYAC 222
Query: 382 AQSGYSEDSLRLFIEMKRYG 401
+ +G E F MK YG
Sbjct: 223 SHAGLVEKGQFYFELMKEYG 242
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 132/276 (47%), Gaps = 25/276 (9%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+ + M+ Y + + AR +F+ MP R+VVSW+ M+ GY+Q G + A R+F +
Sbjct: 44 DVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQAL 103
Query: 181 ---LEKNEISWNGLL-----AAYVQNGR-IEEACMLFESKANWEVVSW--NSLMGGFVKQ 229
L+ N+ +++ ++ + ++ G+ I C+ K +++ S+ +SL+ + K
Sbjct: 104 IEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCL----KTSYDSSSFVGSSLISLYSKC 159
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMV 285
+ DA +F +P+R+ WN M+ AQ+ + +A LF++ + T+ ++
Sbjct: 160 GVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVL 219
Query: 286 SGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
G V++ + F+ M E + +M+ + ++ A + + M +
Sbjct: 220 YACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTE 279
Query: 342 S-WNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
S W ++TG G+ A + DR+ + +S AA
Sbjct: 280 SVWGALLTGCRIHGDTELASFVADRVFELGPVSSAA 315
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 113/274 (41%), Gaps = 52/274 (18%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + + + G A +F+ MP R+ VS++ MI GY G+ + A +
Sbjct: 38 KTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALR 97
Query: 114 VFDQMPQRDL--------------------------------VSWN-------VMISGYV 134
+F Q DL S++ +IS Y
Sbjct: 98 LFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYS 157
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
+ + A +F +P R++ WN ML AQ+ + + A +F +M ++ N I++
Sbjct: 158 KCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLC 217
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
+L A G +E+ FE + + + S++ + +L DA I +MP+
Sbjct: 218 VLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEP 277
Query: 246 DEVSWNTMITG--YAQNNYLAE--AQRLFEEAPV 275
E W ++TG + LA A R+FE PV
Sbjct: 278 TESVWGALLTGCRIHGDTELASFVADRVFELGPV 311
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/612 (38%), Positives = 358/612 (58%), Gaps = 23/612 (3%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++S Y G L AR+VFD MP R+ S+N ++S R A LF +P D
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV--QNGRIEEA--CML 207
S+N +++ AQ+G A R M N S+ L+A + R E ++
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S +V +L+ + K +R +A+ +FD MP R+ VSWN++IT Y QN + EA
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233
Query: 268 RLF----EEAPVKDVFTWTAMVSGYV-----QNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
LF ++ V D T +++S + G+ RM+ ++ V NA++
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDM 293
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + R A+ +F+ M ++V S +MITGYA+S + A+ +F +M + + ++W +I
Sbjct: 294 YAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLI 353
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF- 437
A YA + E++LRLF+ +KR + +VL+ CANLA+L+LG+Q H ++K GF
Sbjct: 354 ATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFR 413
Query: 438 -----EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
E+ FVGN+L+ MY K GS+ + FE + +D +SWN MI GYA++G KDAL
Sbjct: 414 FDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDAL 473
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+LFE M +PD +TM+G+LSAC H+GLV++G YF SM D+G+IP HYTCM+DL
Sbjct: 474 LLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDL 533
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG L E + L++NMP EPDA W +LLGACRL+ ++ E AA +FE++P+N+G Y
Sbjct: 534 LGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPY 593
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSN+YA G+W DV +VR M+ RGV K G SW+E+ KV+ F D +HP ++ I+
Sbjct: 594 VLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIH 653
Query: 673 AYLEELEFKLKQ 684
L ++ ++ +
Sbjct: 654 DTLRIIQMQMSR 665
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 169/377 (44%), Gaps = 36/377 (9%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+ F ++S Y + G + +AR +FD MP +NT S+NA+++ + R D A LF A+
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+ S+N A++A AQ G D+LR
Sbjct: 109 DPDQCSYN-------------------------------AVVAALAQHGRGGDALRFLAA 137
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M LN F S LS CA+ + G+Q+H + K + ++G AL+ MY KC
Sbjct: 138 MHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCER 197
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
EEA F+ + +++++SWN++I Y ++G +AL LF M G PD++T+ ++SA
Sbjct: 198 PEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSA 257
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C+ +G + M + + +VD+ + GR EA+ + M +
Sbjct: 258 CAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVS 317
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+ G Y K+ A V +M +N + +L YA + + ++ ++++
Sbjct: 318 ETSMITG----YAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLK 373
Query: 637 DRGVKKVTGYSWLEVQN 653
V T Y++ V N
Sbjct: 374 RESVWP-THYTYGNVLN 389
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 164/384 (42%), Gaps = 93/384 (24%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------P------------------------- 88
+I WN IT + +NG D AL +F M P
Sbjct: 212 NIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVH 271
Query: 89 ---------RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
R V NA++ Y G+ A+ VFD+M R +VS MI+GY ++ ++
Sbjct: 272 TRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANV 331
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW-------NGLL 192
A+ +F M +++VV+WN +++ YA N + A R+F R+ K E W N L
Sbjct: 332 GDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRL--KRESVWPTHYTYGNVLN 389
Query: 193 A----AYVQNGRIEEACML-----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
A A +Q G+ +L F+S +V NSL+ ++K + D +F+RM
Sbjct: 390 ACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMA 449
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFE------EAPVKDVFTWTAMVSGYVQNGKVDEA 297
RD VSWN MI GYAQN +A LFE E P D T ++S +G V E
Sbjct: 450 ARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERP--DSVTMIGVLSACGHSGLVKEG 507
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
R F +M E + G + T+ + TC MI ++G +
Sbjct: 508 RRYFQSMTEDH---------GIIPTR---------DHYTC--------MIDLLGRAGHLK 541
Query: 358 HARNLFDRMP-QHDCISWAAIIAG 380
L + MP + D + WA+++
Sbjct: 542 EVEELIENMPMEPDAVLWASLLGA 565
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 59/270 (21%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS---- 138
VF+ M RS VS +MI+GY + + A+ VF QM ++++V+WNV+I+ Y N
Sbjct: 306 VFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEA 365
Query: 139 ----------------------LSAARNL-------------------FEMMPKRDVVSW 157
L+A NL F+ P+ DV
Sbjct: 366 LRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVG 425
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKAN 213
N+++ Y + G ++F+RM ++ +SWN ++ Y QNGR ++A +LFE S
Sbjct: 426 NSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNER 485
Query: 214 WEVVSWNSLM-----GGFVKQKRLGDAKWIFDR--MPVRDEVSWNTMITGYAQNNYLAEA 266
+ V+ ++ G VK+ R D +P RD + MI + +L E
Sbjct: 486 PDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDH--YTCMIDLLGRAGHLKEV 543
Query: 267 QRLFEEAPVK-DVFTWTAMVSGYVQNGKVD 295
+ L E P++ D W +++ + +D
Sbjct: 544 EELIENMPMEPDAVLWASLLGACRLHKNID 573
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 46/241 (19%)
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
F F+ N LL Y + GS+ +A F+ + ++ S+N +++ AR G DAL LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD-------------------- 536
++ PD + +++A + G + +M+ D
Sbjct: 106 AIP----DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEK 161
Query: 537 --------YGVIPNSKH------YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ ++ S H T +VD+ + R +EAQ + MP E + +W +L+
Sbjct: 162 ASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMP-ERNIVSWNSLI 220
Query: 583 GACRLYGKTELAEKAAEVIFEME----PENAGMYVLLSNLYA-ASGRWGDVSKVRLKMRD 637
G + E A + M+ P+ + ++S A+GR G R+ D
Sbjct: 221 TCYEQNGPVD--EALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSD 278
Query: 638 R 638
R
Sbjct: 279 R 279
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/543 (41%), Positives = 325/543 (59%), Gaps = 18/543 (3%)
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----- 304
+N ++ Y++ + AQ L P + V TWTA+++G VQNG+ A F M
Sbjct: 45 YNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSI 104
Query: 305 -PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITH 358
P T +G + R + + A+ K +V + Y+++G
Sbjct: 105 QPNDFTFPCAFKASGSL---RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEE 161
Query: 359 ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
AR +FD MP+ + +W A ++ G +D+L FIE ++ G +SVLS CA
Sbjct: 162 ARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAG 221
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
L+ LE+GK +H VK FVG+AL+ MY KCGS+E+A AF+E+ ++++++WN M
Sbjct: 222 LSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAM 281
Query: 479 IAGYARHGFGKDALMLFESMKTVG---IKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
I GYA G A+ LF+ M T G + P+ +T V +LSACS G V G E F SM
Sbjct: 282 IGGYAHQGQADMAVTLFDEM-TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRG 340
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
YG+ P ++HY C+VDLLGRAG +++A +K MP P + WGALLGA +++GK+EL +
Sbjct: 341 RYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGK 400
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AA+ +FE++P ++G +VLLSN++AA+GRW + + VR +M+D G+KK G SW+ N V
Sbjct: 401 VAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAV 460
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F DT H I A L +L +++ G++ T L D+ EEEK + YHSEK+A
Sbjct: 461 HVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIA 520
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+A+G++SIPAG PIR+ KNLR+C DCH+AIK IS IVGR II+RDNN FH F CSC
Sbjct: 521 LAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCR 580
Query: 776 DYW 778
DYW
Sbjct: 581 DYW 583
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 190/438 (43%), Gaps = 61/438 (13%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN-------VMI 130
+SA + + P RS V++ A+I+G + NG+ A F M +RD + N
Sbjct: 59 NSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNM-RRDSIQPNDFTFPCAFKA 117
Query: 131 SGYVRNKSLSAARNLFEMMPKR--DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
SG +R+ + + + + DV + Y++ G + AR++FD M E+N +W
Sbjct: 118 SGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATW 177
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
N L+ V GR ++A + F++ ++ G F V
Sbjct: 178 NAYLSNSVLEGRYDDA------------------LTAFIEARKEGIEPTDFMVSSVLSAC 219
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ +++ + LA + V ++F +A+V Y + G +++A FD MPE+N
Sbjct: 220 AGLSVLEVGKSVHTLA-----VKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN 274
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTC------KNVASWNTMITGYAQSGEITHARNL 362
V+WNAMI GY + DMA LF+ MTC N ++ +++ +++G + +
Sbjct: 275 LVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 334
Query: 363 FDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
F+ M I +A ++ ++G E + + +K+ R S + ++L
Sbjct: 335 FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQF---IKKMPIRPTVSVWGALLGASK 391
Query: 418 NLASLELGKQLHGQLVKVGFEAGCF-VGNALLV--MYCKCGSVEEAYHAFEEIVDKDV-- 472
ELGK L FE GN +L+ M+ G EEA +E+ D +
Sbjct: 392 MFGKSELGKVAADNL----FELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKK 447
Query: 473 ---ISWNTMIAGYARHGF 487
SW T AG A H F
Sbjct: 448 GAGCSWIT--AGNAVHVF 463
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 68/301 (22%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
A + + G + A +F+ MP R+ ++NA +S +L G+ D A F + + +
Sbjct: 149 AFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPT 208
Query: 127 NVMISG---------------------------------------YVRNKSLSAARNLFE 147
+ M+S Y + S+ A F+
Sbjct: 209 DFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFD 268
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM------LEKNEISWNGLLAAYVQNGRI 201
MP+R++V+WN M+ GYA G AD A +FD M + N +++ +L+A + G +
Sbjct: 269 EMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSV 328
Query: 202 EEACMLFESKANWEVVSWNS--------LMG--GFVKQKRLGDAKWIFDRMPVRDEVS-W 250
+FES + + L+G G V+Q A +MP+R VS W
Sbjct: 329 NVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQ-----AYQFIKKMPIRPTVSVW 383
Query: 251 NTMIT-----GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
++ G ++ +A A LFE P+ D + + + G+ +EA ++ M
Sbjct: 384 GALLGASKMFGKSELGKVA-ADNLFELDPL-DSGNHVLLSNMFAAAGRWEEATLVRKEMK 441
Query: 306 E 306
+
Sbjct: 442 D 442
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 40/265 (15%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYH 462
L+ + S++ + + LG+ H Q++K + F+ N L+ MY K A
Sbjct: 4 LSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS--HT 520
++ V++W +IAG ++G AL F +M+ I+P+D T A +
Sbjct: 64 LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRS 123
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
LV K +++ G I + D+ +AG +EA+ + MP E + ATW A
Sbjct: 124 PLVGKQV---HALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNIATWNA 179
Query: 581 LLGACRLYGK-----TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
L L G+ T E E I EP + ++S++ +A
Sbjct: 180 YLSNSVLEGRYDDALTAFIEARKEGI---EPTD----FMVSSVLSA-------------- 218
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSV 660
G S LEV VHT +V
Sbjct: 219 -------CAGLSVLEVGKSVHTLAV 236
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 90/235 (38%), Gaps = 51/235 (21%)
Query: 42 KRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF----------------- 84
K L ++R + +I WN ++ + G D AL F
Sbjct: 155 KAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSS 214
Query: 85 -----------------NSMPRRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRD 122
+++ ++ V N + L++ G ++ A + FD+MP+R+
Sbjct: 215 VLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN 274
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMP------KRDVVSWNTMLSGYAQNGYADAARRI 176
LV+WN MI GY A LF+ M + V++ +LS ++ G + I
Sbjct: 275 LVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 334
Query: 177 FDRM-----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-WNSLMGG 225
F+ M +E + ++ + G +E+A + VS W +L+G
Sbjct: 335 FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGA 389
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/643 (37%), Positives = 366/643 (56%), Gaps = 26/643 (4%)
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-----MLF 208
V+S ++ GYA + +A R+ D + +WN +L A+V + A ML
Sbjct: 20 VLSMGSLGVGYAYSVFAHT--RVLDVL------TWNSMLRAFVNSNMPRRALQSYTEMLE 71
Query: 209 ESKANWEVVSWNSLMGG--FVKQKRLGDA--KWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
S+ + ++ SL+ G + + ++G + M D T++ YA L
Sbjct: 72 RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYV 320
A+ LFE ++ WT+M+SGY++N +EA +++ M E + V+ +++
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191
Query: 321 QTKRMDMAREL---FEAMTCKNVASWNT-MITGYAQSGEITHARNLFDRMPQHDCISWAA 376
+ K + + +L M K A + ++ YA+ G++ AR +FD++ D +W+A
Sbjct: 192 ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSA 251
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
+I GY ++ S ++L+LF E+ R N +V+S CA L LE G+ +H + +
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
+ N+L+ M+ KCG ++ A F+ + KD+ISWN+M+ G A HG G++AL F
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQF 371
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
M+T ++PD+IT +G+L+ACSH GLV++G + FY + YGV S+HY CMVDLL R
Sbjct: 372 HLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCR 431
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLL 615
AG L EA+ ++ MP +PD A WG++LGACR+Y EL E+AA + E+EP N G+Y+LL
Sbjct: 432 AGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILL 491
Query: 616 SNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYL 675
SN+YA W +V KVR M ++G++K G S + + N H+F GD HPE I L
Sbjct: 492 SNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIML 551
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
++ KLK G+V T VL ++ + +KE + HSEKLA+ YG+L G I ++KNL
Sbjct: 552 RQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNL 611
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RVC DCH IK +SKI R I LRD NRFHHF GSCSC DYW
Sbjct: 612 RVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 31/381 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS-----VSYNAMISGYLLNGQLDPAR-- 112
D+ WN + + + AL + M RS ++ +++ G L + +
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 113 --QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
QV M DL +++ Y L +AR LFE M R+ V W +M+SGY +N
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161
Query: 171 DAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSL 222
+ A ++ +M E +E++ L++A + + L E V ++L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP-----VKD 277
+ + K L A+ +FD++ +D +W+ +I GY +NN EA +LF E +
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMP---EKNTVSW-NAMIAGYVQTKRMDMARELFE 333
T A++S Q G ++ R + D + + ++VS N++I + + +D A+ +F+
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIAGYAQSGYSED 389
+M+ K++ SWN+M+ G A G A F M Q D I++ ++ + +G ++
Sbjct: 342 SMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQE 401
Query: 390 SLRLFIEMKR-YGERLNRSPF 409
+LF E++ YG RL +
Sbjct: 402 GKKLFYEIEALYGVRLKSEHY 422
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 164/360 (45%), Gaps = 32/360 (8%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLV 124
+M C D SA +F M R+ V + +MISGY+ N + A ++ +M + D V
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181
Query: 125 SWNVMISGYVRNKSLSAARNLF----EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ ++S K L L EM K V + +++ YA+ G AR++FD++
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQL 241
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN--SLMGGFVKQKRLGD---A 235
+K+ +W+ L+ YV+N R EA LF A + N +++ +LGD
Sbjct: 242 SDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301
Query: 236 KWIFD---RMPVRDEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
+W+ D R VS N++I +++ + A+R+F+ KD+ +W +MV+G +
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALH 361
Query: 292 GKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELF---EAMTCKNVAS-- 342
G EA F M + + +++ ++ + ++LF EA+ + S
Sbjct: 362 GLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEH 421
Query: 343 WNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG---YAQSGYSEDSLRLFIEMK 398
+ M+ ++G + AR MP Q D W +++ Y E++ R +E++
Sbjct: 422 YGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELE 481
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 268/779 (34%), Positives = 403/779 (51%), Gaps = 96/779 (12%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
HVF + N++++ Y G +D AR+VFD++ RD VSWN MI+ R +
Sbjct: 110 HVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWEL 169
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQ------NGYADAARRIFDRMLEKNE---ISWNGLL 192
A +LF +M +V + L A NG +++ +L + + N L+
Sbjct: 170 AVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLL-LGKQVHAFVLRNGDWRTFTNNALV 228
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM---PVR-DEV 248
Y + GR+ EA LF+ + ++VSWN+++ + R +A M VR + V
Sbjct: 229 TMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGV 288
Query: 249 SWNTMITGYAQNNYLA-----EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+ +++ + L A L +++ F A+V Y + ++ R++FD
Sbjct: 289 TLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDG 348
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT---------------------CKN--- 339
M + WNAMIAGYV+ + A ELF M C++
Sbjct: 349 MFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLD 408
Query: 340 -------VASW---------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
V W N ++ Y++ G I AR++F M + D +SW +I GY
Sbjct: 409 KEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVV 468
Query: 384 SGYSEDSLRLFIEMKR------------------YGERLNRSPFTSVLSTCANLASLELG 425
G +D+L L +M+R + + N +VL CA LA+L G
Sbjct: 469 CGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKG 528
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
K++H VK VG+AL+ MY KCG + + FE++ ++VI+WN +I Y H
Sbjct: 529 KEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMH 588
Query: 486 GFGKDALMLFESMKTVG-----IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G G++AL LF M G I+P+++T + I ++ SH+G+V++G FY+M +G+
Sbjct: 589 GKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIE 648
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE-PDAATWGALLGACRLYGKTELAEKAAE 599
P S HY C+VDLLGR+G+++EA NL+K MP W +LLGAC+++ E+ E AA+
Sbjct: 649 PTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAK 708
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+F ++P S L GR KM+++GV+K G SW+E ++VH F
Sbjct: 709 NLFVLDPNVLDYGTKQSML----GR---------KMKEKGVRKEPGCSWIEHGDEVHKFL 755
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD HP+ ++ YLE L ++K++G+V T VLH+VGEEEKE ML HSE+LA+A+G
Sbjct: 756 AGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFG 815
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+L+ G IRV KNLRVC DCH A K ISKIV R IILRD RFHHF G+CSCGDYW
Sbjct: 816 LLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 205/490 (41%), Gaps = 70/490 (14%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
GDW N +T + + G A +F+ + VS+N +IS N + + A
Sbjct: 217 GDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLH 276
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA--- 173
M Q V +G L A +L + +++ ++ M + +N + A
Sbjct: 277 VMLQS-----GVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVD 331
Query: 174 -----------RRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-----MLFESKANWEVV 217
R +FD M + WN ++A YV+N EA M+FE + V
Sbjct: 332 MYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSV 391
Query: 218 SWNSLMGGFVKQKRLGD--------AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
+ +S++ V+ + D KW F+ +D+ N ++ Y++ + A+ +
Sbjct: 392 TLSSVLPACVRCESFLDKEGIHSCVVKWGFE----KDKYVQNALMDMYSRMGRIEIARSI 447
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM---------------------PEK- 307
F KD+ +W M++GYV G+ D+A + M P K
Sbjct: 448 FGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKP 507
Query: 308 NTVSWNAMIAGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
N+V+ ++ G + +E+ + M K+VA + ++ YA+ G + +R +F
Sbjct: 508 NSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVF 567
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-----RLNRSPFTSVLSTCAN 418
++M + I+W +I Y G E++L+LF M G+ R N + ++ ++ ++
Sbjct: 568 EQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSH 627
Query: 419 LASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD--KDVISW 475
++ G L + K G E L+ + + G +EEAY+ + + K V +W
Sbjct: 628 SGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAW 687
Query: 476 NTMIAGYARH 485
++++ H
Sbjct: 688 SSLLGACKIH 697
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 365 RMPQHDCISWAAIIAGYAQSGYS-EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
R+P W + + QS + ++ + M G + F +VL A + L
Sbjct: 47 RLPS----EWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLN 102
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
LGKQLH + K G V N+L+ MY KCG ++ A F+EI ++D +SWN+MI
Sbjct: 103 LGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAAC 162
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT---GLVEKGTEYFYSMNRDYGVI 540
R + A+ LF M + P T+V + ACS+ L+ K F N D+
Sbjct: 163 RFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTF 222
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
N+ +V + + GR+ EA+ L + D +W ++ +
Sbjct: 223 TNNA----LVTMYAKLGRVYEAKTLFDVFD-DKDLVSWNTIISS 261
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/629 (37%), Positives = 348/629 (55%), Gaps = 76/629 (12%)
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW---- 281
+ K R DA+ +FD +P D + WNT++ G + L R+ + V+ T
Sbjct: 159 YFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDAGRVRPDSTTLASS 218
Query: 282 --------------------------------TAMVSGYVQNGKVDEARMIFDAMPEKNT 309
T ++S Y + G +D A+ +FD M +
Sbjct: 219 LRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDL 278
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSG----------- 354
V++NA+I+GY ++ + ELF+ +T N ++ +I Y+ G
Sbjct: 279 VAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAF 338
Query: 355 ------------------------EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
++ AR++FD M + SW A+I+GYAQ+G +E +
Sbjct: 339 VVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMA 398
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
+ LF M+ + N +S LS CA+L +L LGK +H + K E +V AL+ M
Sbjct: 399 VALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDM 458
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCGS+ EA F+ + +K+V+SWN MI+GY HG G +AL L++ M I P T
Sbjct: 459 YAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTF 518
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+ ++ ACSH GLV++G + F M +Y + P +H TCMVDLLGRAG+L+EA L+ P
Sbjct: 519 LSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFP 578
Query: 571 FEP-DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
WGALLGAC ++ ++LA+ A++ +FE++ ENAG YVLLSNLY + + + +
Sbjct: 579 QSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAA 638
Query: 630 KVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
VR + + R + K G + +E+ ++ H F GD LHP+ + IY+YLE L K+ + G+
Sbjct: 639 VVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQP 698
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
T+ L+DV EEEKEHM++ HSEKLA+A+G+LS G IR++KNLRVC DCHNA K IS
Sbjct: 699 VTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFIS 758
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K+ RLI++RD +RFHHF G CSCGDYW
Sbjct: 759 KVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 174/350 (49%), Gaps = 38/350 (10%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D F +A+ Y + + D+AR +FD +P +T+ WN ++AG ++ ++ + +A
Sbjct: 148 DTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDAGR 207
Query: 337 CK--------------------------------NVASWNTMITG----YAQSGEITHAR 360
+ +A ++TG Y++ G++ A+
Sbjct: 208 VRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQ 267
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
LFDRM D +++ A+I+GY+ +G E S+ LF E+ G R N S +V+ +
Sbjct: 268 FLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFG 327
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
L + LH +VK +A V AL +YC+ +E A F+ +++K + SWN MI+
Sbjct: 328 HELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMIS 387
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
GYA++G + A+ LF+ M+ + ++P+ IT+ LSAC+H G + G ++ + + +
Sbjct: 388 GYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLG-KWVHRIISKEKLE 446
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
N T ++D+ + G + EA+++ M + +W A++ L+G+
Sbjct: 447 LNVYVMTALIDMYAKCGSIAEARSIFDRMD-NKNVVSWNAMISGYGLHGQ 495
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 51/288 (17%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------ 121
++ + + G DSA +F+ M V+YNA+ISGY +NG ++ + ++F ++
Sbjct: 254 MSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNS 313
Query: 122 ---------------------------------DLVSWNVMISGYVRNKSLSAARNLFEM 148
D + + + Y R + +AR++F+
Sbjct: 314 STLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDA 373
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA 204
M ++ + SWN M+SGYAQNG + A +F M ++ N I+ + L+A G +
Sbjct: 374 MLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLG 433
Query: 205 C----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
++ + K V +L+ + K + +A+ IFDRM ++ VSWN MI+GY +
Sbjct: 434 KWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLH 493
Query: 261 NYLAEAQRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAM 304
AEA +L+++ + T+ +++ G VDE + +F M
Sbjct: 494 GQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVM 541
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 148/376 (39%), Gaps = 118/376 (31%)
Query: 109 DPARQVFDQMPQRDLVSWNVMISG---------YVR--------------NKSLSAARNL 145
D AR+VFD +P D + WN +++G +VR SL AA
Sbjct: 166 DDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEA 225
Query: 146 FEMMPKRDVVSWNT-------------MLSGYAQNGYADAARRIFDRMLEKNEISWNGLL 192
M R V + ++S Y++ G D+A+ +FDRM + +++N L+
Sbjct: 226 SHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALI 285
Query: 193 AAYVQNGRIEEACMLFE--SKANWE--------VVSWNSLMG---------GFVKQKRLG 233
+ Y NG +E + LF+ + + W V+ S G FV + RL
Sbjct: 286 SGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLD 345
Query: 234 --------------------DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--- 270
A+ IFD M + SWN MI+GYAQN A LF
Sbjct: 346 ADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLM 405
Query: 271 -----EEAPVK-------------------------------DVFTWTAMVSGYVQNGKV 294
+ P+ +V+ TA++ Y + G +
Sbjct: 406 QELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSI 465
Query: 295 DEARMIFDAMPEKNTVSWNAMIAGY----VQTKRMDMARELFEAMTCKNVASWNTMITGY 350
EAR IFD M KN VSWNAMI+GY + + + +++ +A +++ ++I
Sbjct: 466 AEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYAC 525
Query: 351 AQSGEITHARNLFDRM 366
+ G + + +F M
Sbjct: 526 SHGGLVDEGQKVFRVM 541
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 152/359 (42%), Gaps = 59/359 (16%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
A +HM G C V + V ++S Y G +D A+ +FD+M DLV++
Sbjct: 223 AEASHMAMGRCVHGYGVKCGLAEHEHV-VTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAY 281
Query: 127 NVMISGYVRNKSLSAARNLF---------------------------EMMPK-------- 151
N +ISGY N + ++ LF E++ +
Sbjct: 282 NALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVK 341
Query: 152 ----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
D + + + Y + ++AR IFD MLEK SWN +++ Y QNG E A L
Sbjct: 342 ARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVAL 401
Query: 208 FESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT-----MITGYA 258
F+ V ++ +S + L KW+ R+ ++++ N +I YA
Sbjct: 402 FQLMQELNVQPNPITISSTLSACAHLGALSLGKWV-HRIISKEKLELNVYVMTALIDMYA 460
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVSWNA 314
+ +AEA+ +F+ K+V +W AM+SGY +G+ EA ++ DA + ++ +
Sbjct: 461 KCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLS 520
Query: 315 MIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
+I +D +++F MT + M+ ++G++ A L PQ
Sbjct: 521 VIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQ 579
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
+ LHG V G+ A FV +AL +Y K ++A F+ + D I WNT++AG
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP- 191
Query: 485 HGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
G +AL F M G ++PD T+ L A + + G + G+ +
Sbjct: 192 ---GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMG-RCVHGYGVKCGLAEHE 247
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
T ++ L + G +D AQ L M PD + AL+ Y + E + E+ E
Sbjct: 248 HVVTGLMSLYSKCGDMDSAQFLFDRMD-NPDLVAYNALISG---YSVNGMVESSVELFKE 303
Query: 604 M 604
+
Sbjct: 304 L 304
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 333/541 (61%), Gaps = 8/541 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + ++++ Y+ + L +A ++FEE P + V TWTA+ SGY GK EA +F M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMV 204
Query: 306 E----KNTVSWNAMIAGYVQTKRMD----MARELFEAMTCKNVASWNTMITGYAQSGEIT 357
E ++ +++ V +D + + + E KN T++ YA+ G++
Sbjct: 205 EMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR++FD M + D ++W+ +I GYA + + ++ + F++M + + ++ LS+CA
Sbjct: 265 KARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+L +L+LG+ + + F F+ NAL+ MY KCG++ + F+E+ +KD++ N
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
I+G A++G K + +F + +GI PD T +G+L C H GL++ G +F +++ Y
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ +HY CMVDL GRAG LD+A L+ +MP P+A WGALL CRL T+LAE
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
+ + +EP NAG YV LSN+Y+ SGRW + ++VR M +G+KK+ GYSW+E++ VH
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHE 564
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP D+IYA LE+L +++ GFV +T+ V DV +EEKE +L +HSEKLAVA
Sbjct: 565 FLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVA 624
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G++S G+ IRV+KNLRVC DCH +K ISKI R I++RDNNRFH F+ GSCSC DY
Sbjct: 625 FGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDY 684
Query: 778 W 778
W
Sbjct: 685 W 685
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 126/247 (51%), Gaps = 5/247 (2%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF + + +I G+ + ++L LF+ ++++G L+ F VL C ++
Sbjct: 67 LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+LG LH +VK GF +LL +Y G + +A+ FEEI ++ V++W + +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y G ++A+ LF+ M +G++PD +V +LSAC H G ++ G E+ + +
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSG-EWIVKHMEEMEMQK 245
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
NS T +V+L + G++++A+++ +M E D TW ++ Y ++ E
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMG-EKDIVTWSTMIQG---YASNSFPKEGIEFF 301
Query: 602 FEMEPEN 608
+M EN
Sbjct: 302 LQMLQEN 308
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 38/353 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ ++ + +G + A VF +P RS V++ A+ SGY G+ A +F +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKM- 203
Query: 120 QRDLVSWNVMISGYVRNKSLSA-------------ARNLFEMMPKRDVVSWNTMLSGYAQ 166
V V Y + LSA +++ EM +++ T+++ YA+
Sbjct: 204 ----VEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAK 259
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF 226
G + AR +FD M EK+ ++W+ ++ Y N +E F + + GF
Sbjct: 260 CGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGF 319
Query: 227 VKQ----KRLGDAKW---IFDRMP-VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
+ L +W + DR + + N +I YA+ +A +F+E KD+
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFE 333
A +SG +NG V + +F EK +S + ++ G V + F
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVF-GQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 334 AMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMPQH-DCISWAAIIAG 380
A++C + V + M+ + ++G + A L MP + I W A+++G
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 51/319 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF----EMMPK 151
+++S Y +G+L+ A +VF+++P+R +V+W + SGY A +LF EM +
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
D +LS G D+ I M ++KN L+ Y + G++E+A +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
F+S ++V+ W+TMI GYA N++ E
Sbjct: 270 FDSMGEKDIVT-------------------------------WSTMIQGYASNSFPKEGI 298
Query: 268 RLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGY 319
F +E D F+ +S G +D + N NA+I Y
Sbjct: 299 EFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358
Query: 320 VQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ----HDCISWA 375
+ M E+F+ M K++ N I+G A++G + + +F + + D ++
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Query: 376 AIIAGYAQSGYSEDSLRLF 394
++ G +G +D LR F
Sbjct: 419 GLLCGCVHAGLIQDGLRFF 437
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/657 (35%), Positives = 369/657 (56%), Gaps = 45/657 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N IT RNGC A +FN MP +++VS+ A+++ Y N +++ AR+VF+++P ++
Sbjct: 59 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVA 118
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
S+N MI+ Y R + A LF MP+R+ VS+ TM++G+ G D A ++ +
Sbjct: 119 SYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHRE--KPV 176
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
+S N L+ Y + GR+E+A +F+ A +VVSW+S++ G + ++ +A+ +FD+MP
Sbjct: 177 IVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPD 236
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVK----------------------- 276
R+ V+W MI GY + N+L + LF E V
Sbjct: 237 RNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQI 296
Query: 277 -----------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
D + ++++ Y + +D A FD M +K+ V+WN++I GYVQ+ +
Sbjct: 297 HGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNL 356
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ A LFE M K+V SW T+I G+A G I LF MP+ D I+W A+I+G
Sbjct: 357 EKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIE 416
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
E + FI+M + + N + VLS A++A L G Q+H + K+ E + N
Sbjct: 417 EYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQN 476
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+L+ MY KCG+V++A F I +V+++NT+I G A++G GK+AL +F M+ + P
Sbjct: 477 SLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVP 536
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ IT +G+LSAC H GLVE+G YF M Y + P HY CMVDLL RAG DEA +L
Sbjct: 537 NHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSL 596
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ +MPF+P WGA+LGA + + ++AE AA+ +FE+EP +A YV+LSNL++ SG
Sbjct: 597 VSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDE 656
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG----DTLHPEKDRIYAYLEEL 678
+RL + RG+KK G SW+ ++++VH F G + + IYA EE+
Sbjct: 657 RKHELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTEIIYALAEEV 713
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 208/413 (50%), Gaps = 70/413 (16%)
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
K++ +V NS + + + +A+ IF+RMP ++ VSW ++T YA+N+ + +A+ +F
Sbjct: 50 KSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVF 109
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ P +V ++ AM++ Y + VDEA +F +MP++N+VS+ MI G+V DMA +
Sbjct: 110 NKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEK 169
Query: 331 L-----------------------------FEAMTCKNVASWNTMITGYAQSGEITHARN 361
L F+ M K+V SW++MI+G + G+I AR
Sbjct: 170 LHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARK 229
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LFD+MP + ++W +I GY + + +D LF+ M+R G +N + T +L C +
Sbjct: 230 LFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDR 289
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
G Q+HG ++ +GF+ ++ N+++ MY +C S++ A F+ +V KD+++WN++I G
Sbjct: 290 YGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITG 349
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y + G + A+ LFE+M + D ++
Sbjct: 350 YVQSGNLEKAVFLFENMP----QKDVVS-------------------------------- 373
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+T ++ GR+DE L + MP E DA W A++ + E+A
Sbjct: 374 ----WTTLICGFASEGRIDEFIGLFQMMP-EKDAIAWTAVISGLVSIEEYEIA 421
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 241/495 (48%), Gaps = 85/495 (17%)
Query: 47 SKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG 106
+K+R D ++ +N IT + R D A +F+SMP+R+SVSY MI+G++ G
Sbjct: 103 NKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAG 162
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
D A ++ + P +VS NV+I+GY + + A +F+ M ++DVVSW++M+SG +
Sbjct: 163 MFDMAEKLHREKPV--IVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCR 220
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF------------------ 208
G AR++FD+M ++N ++W ++ Y++ +++ +LF
Sbjct: 221 VGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVL 280
Query: 209 -ESKANWE-----------VVSW---------NSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
E+ +++ V+S NS++ + + + A FD M +D
Sbjct: 281 LEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDI 340
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
V+WN++ITGY Q+ L +A LFE P KDV +WT ++ G+ G++DE +F MPEK
Sbjct: 341 VTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEK 400
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAM------------TC------------------ 337
+ ++W A+I+G V + ++A F M +C
Sbjct: 401 DAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIH 460
Query: 338 ---------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+++ N++++ Y++ G + A +F + + +++ II G AQ+G +
Sbjct: 461 AIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGK 520
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ---LHGQLVKVGFEAGCFVGN 445
++L +F +M+ N F VLS C ++ +E G++ L L + E +
Sbjct: 521 EALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYA-- 578
Query: 446 ALLVMYCKCGSVEEA 460
++ + C+ G +EA
Sbjct: 579 CMVDLLCRAGMFDEA 593
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/619 (37%), Positives = 345/619 (55%), Gaps = 56/619 (9%)
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGR---IEEACMLFESKANWEVVSWNSLMGGFV 227
D AR +F +M E N WN +L + EA MLF + L G V
Sbjct: 69 DYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAM----------LCDGRV 118
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL--------FEEAPVKDVF 279
K R ++ +++ A+ + L E +++ F E D F
Sbjct: 119 KPNRF----------------TFPSVLKACARASRLREGKQIHGLIVKFGFHE----DEF 158
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+ +V YV +++A +F KN V ++ + ++ D N
Sbjct: 159 VISNLVRMYVMCAVMEDAYSLFC----KNVVDFDGSCQMELDKRKQD-----------GN 203
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
V WN MI G + G+I A+NLFD MPQ +SW +I+GYAQ+G+ +++ LF EM+
Sbjct: 204 VVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQS 263
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
N SVL A + +LELGK +H K E +G+AL+ MY KCGS++E
Sbjct: 264 SNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDE 323
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A FE + ++ I+W+ +I +A HG +DA++ F M G+ P+D+ +GILSACSH
Sbjct: 324 ALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSH 383
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
GLVE+G +F M + G+ P +HY CMVDLLGRAG L+EA+ L++NMP EPD W
Sbjct: 384 AGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWK 443
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
ALLGAC+++ ++ E+ AE + E+ P ++G YV LSNLYA+ G W V++VRLKM+
Sbjct: 444 ALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMD 503
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
++K G SW+E+ +H F V D H + I A L E+ KL+ +G+ +T V +
Sbjct: 504 IRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTD 563
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
E+E+ L+YHSEK+AVA+G++S P++++KNLR+CEDCH ++K IS I R II+R
Sbjct: 564 EQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVR 623
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D RFH F GSCSC DYW
Sbjct: 624 DRKRFHQFEHGSCSCMDYW 642
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 55/294 (18%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSG---YSEDSLRLFIEMKRYGE-RLNRSP 408
S +I +AR +F +MP+ +C W I+ A++ ++L LF M G + NR
Sbjct: 65 SRDIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFT 124
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY------- 461
F SVL CA + L GKQ+HG +VK GF FV + L+ MY C +E+AY
Sbjct: 125 FPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNV 184
Query: 462 ----------------------------------------HAFEEIVDKDVISWNTMIAG 481
+ F+E+ + V+SWN MI+G
Sbjct: 185 VDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISG 244
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT-EYFYSMNRDYGVI 540
YA++G +A+ LF+ M++ I P+ +T+V +L A + G +E G + Y+ +
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEI- 303
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ + +VD+ + G +DEA + + +P + +A TW A++GA ++G+ E A
Sbjct: 304 -DDVLGSALVDMYSKCGSIDEALQVFETLP-KRNAITWSAIIGAFAMHGRAEDA 355
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 174/421 (41%), Gaps = 79/421 (18%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKS---LSAARNLFEMM-----PKRDVVSWNT 159
+D AR VF QMP+ + WN ++ S A LF M K + ++ +
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127
Query: 160 MLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLF------- 208
+L A+ ++I +++ ++E + L+ YV +E+A LF
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187
Query: 209 ---------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+ K + VV WN ++ G V+ + AK +FD MP R VSWN MI+GYAQ
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQ 247
Query: 260 NNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVS 311
N + EA LF+E ++ T +++ + G ++ + I E + V
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVL 307
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+A++ Y + +D A ++FE + +N +W+ +I +A G
Sbjct: 308 GSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGR---------------- 351
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ED++ F M + G N + +LS C++ +E G+
Sbjct: 352 ---------------AEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSH 396
Query: 432 LVK-VGFEA-----GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYAR 484
+VK VG + GC V + + G +EEA + ++ D + W ++
Sbjct: 397 MVKVVGLQPRIEHYGCMVD-----LLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKM 451
Query: 485 H 485
H
Sbjct: 452 H 452
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 20/262 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N MI G + G + A+ +FD+MPQR +VSWNVMISGY +N A NLF+ M
Sbjct: 205 VLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSS 264
Query: 153 DV----VSWNTMLSGYAQNGYADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEA 204
++ V+ ++L A+ G + + I +E +++ + L+ Y + G I+EA
Sbjct: 265 NIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEA 324
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQN 260
+FE+ ++W++++G F R DA F M ++V++ +++ +
Sbjct: 325 LQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHA 384
Query: 261 NYLAEAQRLFEEAPVKDVFT------WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWN 313
+ E + F VK V + MV + G ++EA + MP E + V W
Sbjct: 385 GLVEEGRSFFSHM-VKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWK 443
Query: 314 AMIAGYVQTKRMDMARELFEAM 335
A++ K + M + E +
Sbjct: 444 ALLGACKMHKNLKMGERVAETL 465
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 25/312 (8%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
++V WN+MI G VR + +A+NLF+ MP+R VVSWN M+SGYAQNG+ A +F M
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEEA--CMLFESKANWEV--VSWNSLMGGFVKQKRLG 233
++ N ++ +L A + G +E L+ K E+ V ++L+ + K +
Sbjct: 263 SSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSID 322
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYV 289
+A +F+ +P R+ ++W+ +I +A + +A F + + + ++S
Sbjct: 323 EALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACS 382
Query: 290 QNGKVDEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASW 343
G V+E R F M + + M+ + ++ A EL M + + W
Sbjct: 383 HAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIW 442
Query: 344 NTMITGYAQSGEITH----ARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
++ + A L + P HD S+ A+ YA G E R+ ++MK
Sbjct: 443 KALLGACKMHKNLKMGERVAETLMELAP-HDSGSYVALSNLYASLGNWEAVARVRLKMK- 500
Query: 400 YGERLNRSPFTS 411
G + + P S
Sbjct: 501 -GMDIRKDPGCS 511
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 54/288 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ WN+ I +R G SA ++F+ MP+RS VS+N MISGY NG A +F +
Sbjct: 201 DGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQE 260
Query: 118 MPQRDL---------------------------------------VSWNVMISGYVRNKS 138
M ++ V + ++ Y + S
Sbjct: 261 MQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGS 320
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ A +FE +PKR+ ++W+ ++ +A +G A+ A F M + N++++ G+L+A
Sbjct: 321 IDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380
Query: 195 YVQNGRIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G +EE F + + ++ + L +A+ + MP+ D+V
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDV 440
Query: 249 SWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNG 292
W ++ + L +R L E AP D ++ A+ + Y G
Sbjct: 441 IWKALLGACKMHKNLKMGERVAETLMELAP-HDSGSYVALSNLYASLG 487
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/613 (37%), Positives = 359/613 (58%), Gaps = 53/613 (8%)
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEE 272
+S N L+ K+ +L A + + + ++ +I + L++A R + +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM-----IAGY-------- 319
+D F T ++ Y G VD AR +FD ++ WNA+ +AG+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 320 -------VQTKRMDM-------------------ARELFEAMTCKNVAS----WNTMITG 349
V++ R +E+ +T + +S T++
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP- 408
YA+ G + +A +F MP + +SW+A+IA YA++G + ++LR F EM R E + SP
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR--ETKDSSPN 284
Query: 409 ---FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
SVL CA+LA+LE GK +HG +++ G ++ V +AL+ MY +CG +E F+
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ D+DV+SWN++I+ Y HG+GK A+ +FE M G P +T V +L ACSH GLVE+
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G F +M RD+G+ P +HY CMVDLLGRA RLDEA ++++M EP WG+LLG+C
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R++G ELAE+A+ +F +EP+NAG YVLL+++YA + W +V +V+ + RG++K+ G
Sbjct: 465 RIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
W+EV+ K+++F D +P ++I+A+L +L +K+ G++ TK VL+++ EEKE
Sbjct: 525 RCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKER 584
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
++ HSEKLA+A+G+++ G PIR+ KNLR+CEDCH K ISK + + I++RD NRFH
Sbjct: 585 IVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFH 644
Query: 766 HFSGGSCSCGDYW 778
F G CSCGDYW
Sbjct: 645 RFKNGVCSCGDYW 657
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 151/388 (38%), Gaps = 74/388 (19%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA----RNLF 146
+ +S N +I G+L A +V Q ++ ++I SLS A R++
Sbjct: 45 AKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHIL 104
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE--- 203
+ +D ++ Y+ G D AR++FD+ ++ WN L A G EE
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 204 ----------------------ACMLFESKANW------------------EVVSWNSLM 223
AC+ E N V +L+
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA--PVKDVF-T 280
+ + + A ++F MPVR+ VSW+ MI YA+N EA R F E KD
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
MVS + A + +I GY+ + +D + A
Sbjct: 285 SVTMVS-------------VLQACASLAALEQGKLIHGYILRRGLDSILPVISA------ 325
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
++T Y + G++ + +FDRM D +SW ++I+ Y GY + ++++F EM
Sbjct: 326 -----LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQL 428
G F SVL C++ +E GK+L
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 32/271 (11%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK--- 183
++ Y R + A +F MP R+VVSW+ M++ YA+NG A A R F M+ +
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 184 ---NEISWNGLLAAYVQNGRIEEACM----LFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
N ++ +L A +E+ + + + + ++L+ + + +L +
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------APVKDVFTWTAMVSGY 288
+FDRM RD VSWN++I+ Y + Y +A ++FEE PV T+ +++
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV----TFVSVLGAC 396
Query: 289 VQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVAS 342
G V+E + +F+ M + + + M+ + R+D A ++ + M T
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 343 WNTMITGYAQSGEITHA----RNLFDRMPQH 369
W +++ G + A R LF P++
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 39/295 (13%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--PQRDLVS 125
+ + R GC D A +VF MP R+ VS++AMI+ Y NG+ A + F +M +D
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 126 WNV-MISGYVRNKSLSAA------------RNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+V M+S SL+A R L ++P V+S +++ Y + G +
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP---VIS--ALVTMYGRCGKLEV 338
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVK 228
+R+FDRM +++ +SWN L+++Y +G ++A +FE + A+ V++ S++G
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYA-QNNYLAEAQRLFEEAP-VKDVFT------ 280
+ + + K +F+ M RD I YA + L A RL E A V+D+ T
Sbjct: 399 EGLVEEGKRLFETM-WRDH-GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 281 WTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
W +++ +G V+ A R +F A+ KN ++ + Y + + D + +
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLF-ALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/536 (40%), Positives = 320/536 (59%), Gaps = 8/536 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA----RMIFDAMPE 306
++++ YA+ L AQR+F+E P WTA+++ Y+ G + EA R F
Sbjct: 565 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 624
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG----YAQSGEITHARNL 362
++ + ++ + + ++ A + VA + T Y + GE+ AR +
Sbjct: 625 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 684
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD+M D ++W A++ GYA +G+ ++L LF+ M+ G + + LS C L +L
Sbjct: 685 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 744
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LG+Q + F +G AL+ MY KCGS EA+ F+++ KD+I WN MI G
Sbjct: 745 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 804
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
G K A L M+ G+K +D T +G+L +C+HTGL++ G YF++M + Y + P
Sbjct: 805 GMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 864
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVDLL RAG L EA L+ +MP +A GALLG C+++ TELAE + +
Sbjct: 865 IEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLI 924
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+EP N+G YV+LSN+Y+ GRW D +K+RL M+ +GV+KV SW+E + KVH F VGD
Sbjct: 925 LLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGD 984
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP D+IY L+EL ++K G+ +T++V+ DV +EEKEH L +HSEKLA+A+ +L
Sbjct: 985 KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLI 1044
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IRV KNLRVC DCH AIK +S+I R II+RDNNRFH F GSCSC DYW
Sbjct: 1045 TGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 134/346 (38%), Gaps = 93/346 (26%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------- 270
SL+ + K L A+ +FD MP V W +IT Y L EA +
Sbjct: 565 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 624
Query: 271 ------------------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
+E + VF TA V YV+ G++ +AR +
Sbjct: 625 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 684
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------CKNVAS----------- 342
FD M K+ V+W AM+ GY A +LF AM C VA
Sbjct: 685 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 744
Query: 343 -----------WN----------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
W+ +I YA+ G A +F +M + D I W A+I G
Sbjct: 745 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 804
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-- 439
+G+ + + L +M++ G +LN + F +L +C + ++ G++ + K+ +
Sbjct: 805 GMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 864
Query: 440 ----GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
GC V + + G ++EA+ ++VD + N +I G
Sbjct: 865 IEHYGCMVD-----LLSRAGLLQEAH----QLVDDMPMPANAVILG 901
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 153/417 (36%), Gaps = 90/417 (21%)
Query: 12 SSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSR-NKPKPAGDWDIRQWNVAITT 70
+S LH H ++ L P PS T+ L S SR P AG+ + ++ + +
Sbjct: 505 TSSALHLHALRVHCLL------PNPSHLTIPIALKSASRLPHPLRAGE-QLHARSLKLPS 557
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
H HV S+ +S Y G L A++VFD+MP V W +I
Sbjct: 558 HTNP-------HVLTSL-----------LSLYAKCGLLHRAQRVFDEMPHPSTVPWTALI 599
Query: 131 SGY--------------------VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ Y +R S +A R L D+ + T+ Q G A
Sbjct: 600 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 659
Query: 171 DA-------------------ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES- 210
+ AR +FD+M K+ ++W ++ Y NG EA LF +
Sbjct: 660 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 719
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN----------TMITGYAQN 260
+A ++ G RLG R +R V W+ +I YA+
Sbjct: 720 QAEGMKPDCYAVAGALSACTRLGALD--LGRQAIR-MVDWDEFLDNPVLGTALIDMYAKC 776
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AM 315
EA +F++ KD+ W AM+ G G A + M EK+ V N +
Sbjct: 777 GSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQM-EKSGVKLNDNTFIGL 835
Query: 316 IAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ T + R F MT + + M+ +++G + A L D MP
Sbjct: 836 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 892
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 12/229 (5%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L G+QLH + +K+ V +LL +Y KCG + A F+E+ + W +I
Sbjct: 542 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 601
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y G ++A+ + + G++PD T V +L+AC+ + G E + GV
Sbjct: 602 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG-ETVWRAAEQEGVAQ 660
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+ T VDL + G + +A+ + M + DA WGA++G Y +A ++
Sbjct: 661 SVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMVGG---YASNGHPREALDLF 716
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
M+ E GM + YA +G + RL D G + + W E
Sbjct: 717 LAMQAE--GMK---PDCYAVAGALSACT--RLGALDLGRQAIRMVDWDE 758
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 182/466 (39%), Gaps = 74/466 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
A + Y+ G++ AR+VFD+M +D V+W M+ GY N A +LF M K
Sbjct: 666 TAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 725
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLE-----KNEISWNGLLAAYVQNGRIEEACM 206
D + LS + G D R+ RM++ N + L+ Y + G EA +
Sbjct: 726 PDCYAVAGALSACTRLGALDLGRQAI-RMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 784
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI--------TGY 257
+F+ +++ WN+++ G A + +M +++ NT I TG
Sbjct: 785 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGL 844
Query: 258 AQNN--YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNA 314
Q+ Y +L+ +P + + MV + G + EA + D MP N V A
Sbjct: 845 IQDGRRYFHNMTKLYHISP--RIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 902
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++ G + ++A + + + + WN SG N+
Sbjct: 903 LLGGCKIHRNTELAEHVLKQLIL--LEPWN--------SGNYVMLSNI------------ 940
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-------KQ 427
Y+ G ED+ +L ++MK G + + P S + + +G Q
Sbjct: 941 ------YSNRGRWEDAAKLRLDMKAKG--VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 992
Query: 428 LHGQLVKVGFEAGC--FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
++ +L ++G E + +VM+ EE H +K I++N +I G
Sbjct: 993 IYKKLDELGLEMKTMGYEPTTEVVMFDV--EDEEKEHTLVHHSEKLAIAFNLLITGPGE- 1049
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
K + + D T + ++S +H ++ + F+
Sbjct: 1050 --------TIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFH 1087
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/536 (40%), Positives = 320/536 (59%), Gaps = 8/536 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA----RMIFDAMPE 306
++++ YA+ L AQR+F+E P WTA+++ Y+ G + EA R F
Sbjct: 110 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 169
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG----YAQSGEITHARNL 362
++ + ++ + + ++ A + VA + T Y + GE+ AR +
Sbjct: 170 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 229
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD+M D ++W A++ GYA +G+ ++L LF+ M+ G + + LS C L +L
Sbjct: 230 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 289
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LG+Q + F +G AL+ MY KCGS EA+ F+++ KD+I WN MI G
Sbjct: 290 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 349
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
G K A L M+ G+K +D T +G+L +C+HTGL++ G YF++M + Y + P
Sbjct: 350 GMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 409
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVDLL RAG L EA L+ +MP +A GALLG C+++ TELAE + +
Sbjct: 410 IEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLI 469
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+EP N+G YV+LSN+Y+ GRW D +K+RL M+ +GV+KV SW+E + KVH F VGD
Sbjct: 470 LLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGD 529
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP D+IY L+EL ++K G+ +T++V+ DV +EEKEH L +HSEKLA+A+ +L
Sbjct: 530 KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLI 589
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IRV KNLRVC DCH AIK +S+I R II+RDNNRFH F GSCSC DYW
Sbjct: 590 TGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 139/358 (38%), Gaps = 95/358 (26%)
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
S N V++ SL+ + K L A+ +FD MP V W +IT Y L EA
Sbjct: 100 LPSHTNPHVLT--SLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAV 157
Query: 268 RLF---------------------------------------EEAPVKDVFTWTAMVSGY 288
+ +E + VF TA V Y
Sbjct: 158 HVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLY 217
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------CKNVA 341
V+ G++ +AR +FD M K+ V+W AM+ GY A +LF AM C VA
Sbjct: 218 VKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVA 277
Query: 342 ----------------------SWN----------TMITGYAQSGEITHARNLFDRMPQH 369
W+ +I YA+ G A +F +M +
Sbjct: 278 GALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKK 337
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
D I W A+I G +G+ + + L +M++ G +LN + F +L +C + ++ G++
Sbjct: 338 DIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYF 397
Query: 430 GQLVKVGFEA------GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+ K+ + GC V + + G ++EA+ ++VD + N +I G
Sbjct: 398 HNMTKLYHISPRIEHYGCMVD-----LLSRAGLLQEAH----QLVDDMPMPANAVILG 446
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 153/414 (36%), Gaps = 84/414 (20%)
Query: 12 SSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSR-NKPKPAGDWDIRQWNVAITT 70
+S LH H ++ L P PS T+ L S SR P AG+ + ++ + +
Sbjct: 50 TSSALHLHALRVHCLL------PNPSHLTIPIALKSASRLPHPLRAGE-QLHARSLKLPS 102
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
H HV S+ +S Y G L A++VFD+MP V W +I
Sbjct: 103 HTNP-------HVLTSL-----------LSLYAKCGLLHRAQRVFDEMPHPSTVPWTALI 144
Query: 131 SGY--------------------VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ Y +R S +A R L D+ + T+ Q G A
Sbjct: 145 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 204
Query: 171 DA-------------------ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES- 210
+ AR +FD+M K+ ++W ++ Y NG EA LF +
Sbjct: 205 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 264
Query: 211 KANWEVVSWNSLMGGFVKQKRLG--DAKWIFDRMPVRDE-----VSWNTMITGYAQNNYL 263
+A ++ G RLG D RM DE V +I YA+
Sbjct: 265 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGST 324
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMIAG 318
EA +F++ KD+ W AM+ G G A + M EK+ V N ++
Sbjct: 325 VEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQM-EKSGVKLNDNTFIGLLCS 383
Query: 319 YVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
T + R F MT + + M+ +++G + A L D MP
Sbjct: 384 CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 437
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 12/229 (5%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L G+QLH + +K+ V +LL +Y KCG + A F+E+ + W +I
Sbjct: 87 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y G ++A+ + + G++PD T V +L+AC+ + G E + GV
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG-ETVWRAAEQEGVAQ 205
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+ T VDL + G + +A+ + M + DA WGA++G Y +A ++
Sbjct: 206 SVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMVGG---YASNGHPREALDLF 261
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
M+ E GM + YA +G + RL D G + + W E
Sbjct: 262 LAMQAE--GMK---PDCYAVAGALSACT--RLGALDLGRQAIRMVDWDE 303
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 182/466 (39%), Gaps = 74/466 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
A + Y+ G++ AR+VFD+M +D V+W M+ GY N A +LF M K
Sbjct: 211 TAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 270
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLE-----KNEISWNGLLAAYVQNGRIEEACM 206
D + LS + G D R+ RM++ N + L+ Y + G EA +
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAI-RMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 329
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI--------TGY 257
+F+ +++ WN+++ G A + +M +++ NT I TG
Sbjct: 330 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGL 389
Query: 258 AQNN--YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNA 314
Q+ Y +L+ +P + + MV + G + EA + D MP N V A
Sbjct: 390 IQDGRRYFHNMTKLYHISP--RIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 447
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++ G + ++A + + + + WN SG N+
Sbjct: 448 LLGGCKIHRNTELAEHVLKQLIL--LEPWN--------SGNYVMLSNI------------ 485
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-------KQ 427
Y+ G ED+ +L ++MK G + + P S + + +G Q
Sbjct: 486 ------YSNRGRWEDAAKLRLDMKAKG--VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 537
Query: 428 LHGQLVKVGFEAGC--FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
++ +L ++G E + +VM+ EE H +K I++N +I G
Sbjct: 538 IYKKLDELGLEMKTMGYEPTTEVVMFDV--EDEEKEHTLVHHSEKLAIAFNLLITGPGE- 594
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
K + + D T + ++S +H ++ + F+
Sbjct: 595 --------TIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFH 632
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/700 (34%), Positives = 394/700 (56%), Gaps = 43/700 (6%)
Query: 118 MPQRDLVSWNVMISGYV----RNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGY 169
M +R +V+ +++ V + ++L R L E + + D+ +L YA+ G
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGG 225
D A+R+F+ M K+ +W+ +++AY + GR E A +L+ VV++ +GG
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 226 FVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
L D + I R+ +D+V ++++ Y + + + EA+++FE ++V ++
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA----MIAGYVQ-TKRMDMARELFEAMT 336
TAM+S YVQ G+ EA +F M + + NA I G V+ ++ R++ +
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 337 CK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+ NV N ++T Y + G AR +FD M + ISW ++IA YAQ G +++L
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
LF KR + F+S L+ CA L +L+ G+++H ++V+ A + +LL MY
Sbjct: 301 LF---KRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLLSMYA 356
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+CGS+++A F + +D S N MIA + +HG K AL ++ M+ GI D IT V
Sbjct: 357 RCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVS 416
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+L ACSHT LV ++F S+ D+GV+P +HY CMVD+LGR+GRL +A+ L++ MP++
Sbjct: 417 VLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQ 476
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
DA W LL C+ +G E+AA +FE+ P YV LSN+YAA+ R+ D +VR
Sbjct: 477 TDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVR 536
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK-------DRIYAYLEELEFKLKQD 685
+M +RGV S++E+ N++H F+ G ++ +R+ + L EL +KQ
Sbjct: 537 KEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQA 596
Query: 686 GFVYSTKLVLHD----VGEEEKEHMLRYHSEKLAVAYGILSIP---AGRPIRVMKNLRVC 738
G+V T+ V + EEEK+ L +HSE+LA+AYG+++ RP+RV+ + RVC
Sbjct: 597 GYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVC 656
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+AIK +S I+ + I +RD NRFHHF G+CSCGD+W
Sbjct: 657 SDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 203/456 (44%), Gaps = 76/456 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
A++ Y G LD A++VF+ M +DL +W+ +IS Y R A L+ M +
Sbjct: 49 TALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVE 108
Query: 152 RDVVSWNTMLSGYAQ-NGYADA----------------------------------ARRI 176
+VV++ L G A G AD AR++
Sbjct: 109 PNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKV 168
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN-----SLMGGFVKQKR 231
F+ M +N S+ +++AYVQ G EA LF + E + N +++G
Sbjct: 169 FEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGN 228
Query: 232 LGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
L + + + R + V N ++T Y + EA+++F+ ++V +WT+M++
Sbjct: 229 LEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAA 288
Query: 288 YVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS---W 343
Y Q+G EA +F M E + VS+++ + +D RE+ + ++AS
Sbjct: 289 YAQHGNPQEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME 348
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
++++ YA+ G + AR +F+RM D S A+IA + Q G + +LR++ M++ G
Sbjct: 349 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIP 408
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC--------G 455
+ F SVL C++ + + + LV G LV + C G
Sbjct: 409 ADGITFVSVLVACSHTSLVADCRDFFQSLVMDH-------GVVPLVEHYLCMVDVLGRSG 461
Query: 456 SVEEAYHAFEEIVD-----KDVISWNTMIAGYARHG 486
+ +A EE+V+ D ++W T+++G RHG
Sbjct: 462 RLGDA----EELVETMPYQTDAVAWMTLLSGCKRHG 493
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 163/362 (45%), Gaps = 56/362 (15%)
Query: 80 ALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
A+H + S + V +++++ YL ++ AR+VF+ M R++ S+ MIS YV+
Sbjct: 132 AIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAG 191
Query: 138 SLSAARNLFEMMPK----------------------------------------RDVVSW 157
+ A LF M K +VV
Sbjct: 192 EHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQ 251
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEV 216
N +++ Y + G AR++FD M +N ISW ++AAY Q+G +EA LF+
Sbjct: 252 NALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEPSG 311
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS---WNTMITGYAQNNYLAEAQRLFEEA 273
VS++S + L + + I R+ S ++++ YA+ L +A+R+F
Sbjct: 312 VSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMYARCGSLDDARRVFNRM 371
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR 329
+D F+ AM++ + Q+G+ +A I+ M ++ + +++ +++ T + R
Sbjct: 372 KTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCR 431
Query: 330 ELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQ 383
+ F+++ + V + M+ +SG + A L + MP Q D ++W +++G +
Sbjct: 432 DFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKR 491
Query: 384 SG 385
G
Sbjct: 492 HG 493
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 45/156 (28%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ------- 120
++ + R G D A VFN M R + S NAMI+ + +G+ A +++ +M Q
Sbjct: 352 LSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADG 411
Query: 121 -------------------RDLVSWNVMISGYV--------------RNKSLSAARNLFE 147
RD VM G V R+ L A L E
Sbjct: 412 ITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVE 471
Query: 148 MMP-KRDVVSWNTMLSGYAQNGYAD----AARRIFD 178
MP + D V+W T+LSG ++G + AAR++F+
Sbjct: 472 TMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFE 507
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 259/743 (34%), Positives = 398/743 (53%), Gaps = 63/743 (8%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQM------PQRDLVSWNVMISGYVRNKS--LSAARNLF 146
YN++I GY +G A +F +M P + + + + R+K + +
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM 206
+M +D+ N+++ YA+ G D AR++FD M E+N +SW ++ Y + ++A
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220
Query: 207 LFESKANWEVVSWNS-----LMGGFVKQKRLGDAKWIFDRMPVRD------EVSWNTMIT 255
LF E V NS ++ K + L + ++D +RD ++ + ++
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDF--IRDSGIEVNDLMISALVD 278
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNT 309
Y + N + A+RLF+E ++ AM S YV+ G EA + + M P++ +
Sbjct: 279 MYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRIS 338
Query: 310 V-----------------------------SW----NAMIAGYVQTKRMDMARELFEAMT 336
+ SW NA+I Y++ R D A +F+ M+
Sbjct: 339 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 398
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
K V +WN+++ GY ++GE+ A F+ MP+ + +SW II+ Q E+++ +F
Sbjct: 399 NKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHY 458
Query: 397 MKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M+ E +N T S+ S C +L +L+L K ++ + K + +G L+ M+ +C
Sbjct: 459 MQSQ-ECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRC 517
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G E A F + ++DV +W I A G + A+ LF M G+KPD + +G L
Sbjct: 518 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGAL 577
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+AC H GLV++G E F SM + +GV P HY CMVDLLGRAG L+EA L+K+MP EP+
Sbjct: 578 TACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPN 637
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
W +LL ACR+ G E+A AAE I + PE G YVLLSN+YA++GRW D++KVRL
Sbjct: 638 DVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 697
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
M+++G++K G S ++++ K H F+ GD HPE +I A L+EL + G V V
Sbjct: 698 MKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNV 757
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
L DV E+EK ML HSEKLA+A+G++S G IR++KNLRVC CH+ K SK+ R
Sbjct: 758 LMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNR 817
Query: 755 LIILRDNNRFHHFSGGSCSCGDY 777
IILRDNNRFH G CSC D+
Sbjct: 818 EIILRDNNRFHFIRQGKCSCSDF 840
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 356 ITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
++ A+ +F+ + C + ++I GYA SG ++++ LFI M G ++ F LS
Sbjct: 82 LSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLS 141
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA G Q+HG ++K+ + FV N+L+ Y +CG ++ A F+E+ +++V+S
Sbjct: 142 VCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVS 201
Query: 475 WNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
W +MI GYAR F KDA+ LF M + + P+ +TMV ++SAC+ +E G E Y
Sbjct: 202 WTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETG-EKVYDF 260
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
RD G+ N + +VD+ + +D A+ L
Sbjct: 261 IRDSGIEVNDLMISALVDMYMKCNAIDIAKRL 292
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 135/565 (23%), Positives = 232/565 (41%), Gaps = 106/565 (18%)
Query: 31 NTNPYPSKKTLKRHLNSKSRNKPKPAG----------DW--DIRQWNVAITTHMRNGCCD 78
N+ P K T L+ ++++ K G D+ D+ N + + G D
Sbjct: 126 NSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELD 185
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN-----VMISGY 133
A VF+ M R+ VS+ +MI GY A +F +M + + V N +IS
Sbjct: 186 CARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISAC 245
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSG----YAQNGYADAARRIFDRMLEKNEISWN 189
+ + L +++ + + + M+S Y + D A+R+FD N N
Sbjct: 246 AKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCN 305
Query: 190 GLLAAYVQNGRIEEAC----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+ + YV+ G +EA ++ +S + +S S + + + + K +
Sbjct: 306 AMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 365
Query: 246 DEVSW----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
SW N +I Y + + A R+F+ K V TW ++V+GY++NG+VD A F
Sbjct: 366 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETF 425
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT---CKNV------------------ 340
+ MPEKN VSWN +I+ VQ + A E+F M C NV
Sbjct: 426 NTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGAL 485
Query: 341 --ASW-----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
A W T++ +++ G+ A ++F+ + D +W A I
Sbjct: 486 DLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 545
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
A +G E ++ LF EM G + + F L+ C HG LV+ G
Sbjct: 546 AMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACC-----------HGGLVQQG----- 589
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI--VDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
+E +++ E++ V + + + M+ R G ++AL L + M
Sbjct: 590 ----------------KEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMP 633
Query: 500 TVGIKPDDITMVGILSACSHTGLVE 524
T +P+D+ +L+AC G VE
Sbjct: 634 T---EPNDVIWNSLLAACRVQGNVE 655
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 174/398 (43%), Gaps = 54/398 (13%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WD N I +M+ D+A +F+ M ++ V++N++++GY+ NG++D A + F+ M
Sbjct: 370 WD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTM 428
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN--TMLSGYAQNGY---ADAA 173
P++++VSWN +IS V+ A +F M ++ V+ + TM+S + G+ D A
Sbjct: 429 PEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLA 488
Query: 174 RRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ I+ +EKN I + L+ + + G E A +F S N +V +W + +G
Sbjct: 489 KWIY-YYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 547
Query: 229 QKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDV 278
+ A +F+ M + D V + +T + + + +F +DV
Sbjct: 548 AGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDV 607
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+ MV + G ++EA + MP E N V WN+++A ++MA
Sbjct: 608 H-YGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAA-------- 658
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
A+ + ++G N+ YA +G D ++ + M
Sbjct: 659 --FAAEKIQVLAPERTGSYVLLSNV------------------YASAGRWNDMAKVRLSM 698
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
K G L + P TSV+ G + H ++ K+
Sbjct: 699 KEKG--LRKPPGTSVIQIRGKTHEFTSGDESHPEMRKI 734
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/439 (48%), Positives = 280/439 (63%), Gaps = 2/439 (0%)
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHD--CISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
S N +I Y + AR +FD MPQ D +SW A+IA Y QS ++ LF M+
Sbjct: 131 SLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 190
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
L++ S+LS C L +LE GK +HG + K G E + ++ MYCKCG +E+
Sbjct: 191 ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 250
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F E+ K + SWN MI G A HG G+ A+ LF+ M+ + PD IT V +LSAC+H
Sbjct: 251 ASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAH 310
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
+GLVE+G YF M G+ P +H+ CMVDLLGRAG L+EA+ L+ MP PDA G
Sbjct: 311 SGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLG 370
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
AL+GACR++G TEL E+ + + E+EP N+G YVLL+NLYA++GRW DV+KVR M DRG
Sbjct: 371 ALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRG 430
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
VKK G+S +E ++ V F G HP+ IYA L+E+ ++ G+V T VLHD+
Sbjct: 431 VKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDID 490
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
EEEKE+ L YHSEKLA+A+G+L G +R+ KNLR+C DCH A K ISK+ R II+R
Sbjct: 491 EEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIR 550
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D NRFHHF G CSC DYW
Sbjct: 551 DRNRFHHFRMGGCSCKDYW 569
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 372 ISWAAII-AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHG 430
I + AI +GY + + + + ++ M N+ + ++ C ++E GKQ+H
Sbjct: 59 IKFCAISKSGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHA 118
Query: 431 QLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV--DKDVISWNTMIAGYARHGFG 488
++K GF A F N L+ MY S+E+A F+ + D++ +SWN MIA Y +
Sbjct: 119 HVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRL 178
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+A LF+ M+ + D +LSAC+ G +E+G ++ + G+ +SK T
Sbjct: 179 HEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQG-KWIHGYIEKSGIELDSKLATT 237
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
++D+ + G L++A + +P + ++W ++G ++GK E A E+ EME E
Sbjct: 238 VIDMYCKCGCLEKASEVFNELP-QKGISSWNCMIGGLAMHGK---GEAAIELFKEMERE 292
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 43/253 (16%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--NTVSWNAMIAGYVQTKRMDMARELFEA 334
D F+ ++ YV +++AR +FD MP++ N+VSWNAMIA YVQ+ R+ A LF+
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187
Query: 335 MTCKNV----------------------ASW-----------------NTMITGYAQSGE 355
M +NV W T+I Y + G
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 247
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ A +F+ +PQ SW +I G A G E ++ LF EM+R + F +VLS
Sbjct: 248 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 307
Query: 416 CANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVI 473
CA+ +E GK + +V G + G ++ + + G +EEA E+ V+ D
Sbjct: 308 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAG 367
Query: 474 SWNTMIAGYARHG 486
++ HG
Sbjct: 368 VLGALVGACRIHG 380
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 19/234 (8%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK--NEISWNGLLAAYVQNGRIEEACMLFES 210
D S N ++ Y + ARR+FD M ++ N +SWN ++AAYVQ+ R+ EA LF+
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187
Query: 211 KANWEVV----SWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNY 262
VV S++ L KWI + D T+I Y +
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 247
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAG 318
L +A +F E P K + +W M+ G +GK + A +F M + + +++ +++
Sbjct: 248 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 307
Query: 319 YVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ ++ + F+ MT + + M+ ++G + AR L + MP
Sbjct: 308 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 361
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 108/255 (42%), Gaps = 49/255 (19%)
Query: 72 MRNGCCDSAL--------HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+R C D A+ HV S N +I Y+ L+ AR+VFD MPQRD
Sbjct: 101 IRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDR 160
Query: 124 --VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
VSWN MI+ YV++ L A LF+ M +VV D+ +
Sbjct: 161 NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVV---------------------LDKFV 199
Query: 182 EKNEISWNGLLAAYVQ----NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+ +S L A Q +G IE++ + +SK V+ + K L A
Sbjct: 200 AASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDM------YCKCGCLEKASE 253
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------APVKDVFTWTAMVSGYVQN 291
+F+ +P + SWN MI G A + A LF+E AP D T+ ++S +
Sbjct: 254 VFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAP--DGITFVNVLSACAHS 311
Query: 292 GKVDEARMIFDAMPE 306
G V+E + F M E
Sbjct: 312 GLVEEGKHYFQYMTE 326
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 54/231 (23%)
Query: 78 DSALHVFNSMPRR--SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV----------- 124
+ A VF++MP+R +SVS+NAMI+ Y+ + +L A +FD+M ++V
Sbjct: 146 EQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLS 205
Query: 125 -----------SW-----------------NVMISGYVRNKSLSAARNLFEMMPKRDVVS 156
W +I Y + L A +F +P++ + S
Sbjct: 206 ACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISS 265
Query: 157 WNTMLSGYAQNGYADAARRIFD----RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
WN M+ G A +G +AA +F M+ + I++ +L+A +G +EE F+
Sbjct: 266 WNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMT 325
Query: 213 NWEVVSWNSLMGGF-------VKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
EV+ M F + L +A+ + + MPV + + G
Sbjct: 326 --EVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVG 374
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K + D + I + + GC + A VFN +P++ S+N MI G ++G+ + A +
Sbjct: 225 KSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIE 284
Query: 114 VFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMP-----KRDVVSWNTMLSGY 164
+F +M + D +++ ++S + + ++ F+ M K + + M+
Sbjct: 285 LFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLL 344
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
+ G + AR++ + M + G+L A V RI
Sbjct: 345 GRAGLLEEARKLINEMPVNPDA---GVLGALVGACRI 378
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/536 (40%), Positives = 320/536 (59%), Gaps = 8/536 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA----RMIFDAMPE 306
++++ YA+ L AQR+F+E P WTA+++ Y+ G + EA R F
Sbjct: 589 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 648
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG----YAQSGEITHARNL 362
++ + ++ + + ++ A + VA + T Y + GE+ AR +
Sbjct: 649 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 708
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD+M D ++W A++ GYA +G+ ++L LF+ M+ G + + LS C L +L
Sbjct: 709 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 768
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LG+Q + F +G AL+ MY KCGS EA+ F+++ KD+I WN MI G
Sbjct: 769 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 828
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
G K A L M+ G+K +D T +G+L +C+HTGL++ G YF++M + Y + P
Sbjct: 829 GMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 888
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY CMVDLL RAG L EA L+ +MP +A GALLG C+++ TELAE + +
Sbjct: 889 IEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLI 948
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
+EP N+G YV+LSN+Y+ GRW D +K+RL M+ +GV+KV SW+E + KVH F VGD
Sbjct: 949 LLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGD 1008
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
HP D+IY L+EL ++K G+ +T++V+ DV +EEKEH L +HSEKLA+A+ +L
Sbjct: 1009 KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLI 1068
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IRV KNLRVC DCH AIK +S+I R II+RDNNRFH F GSCSC DYW
Sbjct: 1069 TGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 134/346 (38%), Gaps = 93/346 (26%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------- 270
SL+ + K L A+ +FD MP V W +IT Y L EA +
Sbjct: 589 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 648
Query: 271 ------------------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
+E + VF TA V YV+ G++ +AR +
Sbjct: 649 PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREV 708
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-------CKNVAS----------- 342
FD M K+ V+W AM+ GY A +LF AM C VA
Sbjct: 709 FDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGAL 768
Query: 343 -----------WN----------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
W+ +I YA+ G A +F +M + D I W A+I G
Sbjct: 769 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL 828
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-- 439
+G+ + + L +M++ G +LN + F +L +C + ++ G++ + K+ +
Sbjct: 829 GMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 888
Query: 440 ----GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
GC V + + G ++EA+ ++VD + N +I G
Sbjct: 889 IEHYGCMVD-----LLSRAGLLQEAH----QLVDDMPMPANAVILG 925
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 153/417 (36%), Gaps = 90/417 (21%)
Query: 12 SSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSR-NKPKPAGDWDIRQWNVAITT 70
+S LH H ++ L P PS T+ L S SR P AG+ + ++ + +
Sbjct: 529 TSSALHLHALRVHCLL------PNPSHLTIPIALKSASRLPHPLRAGE-QLHARSLKLPS 581
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
H HV S+ +S Y G L A++VFD+MP V W +I
Sbjct: 582 HTNP-------HVLTSL-----------LSLYAKCGLLHRAQRVFDEMPHPSTVPWTALI 623
Query: 131 SGY--------------------VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ Y +R S +A R L D+ + T+ Q G A
Sbjct: 624 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 683
Query: 171 DA-------------------ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES- 210
+ AR +FD+M K+ ++W ++ Y NG EA LF +
Sbjct: 684 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 743
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN----------TMITGYAQN 260
+A ++ G RLG R +R V W+ +I YA+
Sbjct: 744 QAEGMKPDCYAVAGALSACTRLGALD--LGRQAIR-MVDWDEFLDNPVLGTALIDMYAKC 800
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AM 315
EA +F++ KD+ W AM+ G G A + M EK+ V N +
Sbjct: 801 GSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQM-EKSGVKLNDNTFIGL 859
Query: 316 IAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ T + R F MT + + M+ +++G + A L D MP
Sbjct: 860 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 916
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 12/229 (5%)
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L G+QLH + +K+ V +LL +Y KCG + A F+E+ + W +I
Sbjct: 566 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y G ++A+ + + G++PD T V +L+AC+ + G E + GV
Sbjct: 626 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG-ETVWRAAEQEGVAQ 684
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+ T VDL + G + +A+ + M + DA WGA++G Y +A ++
Sbjct: 685 SVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMVGG---YASNGHPREALDLF 740
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
M+ E GM + YA +G + RL D G + + W E
Sbjct: 741 LAMQAE--GMK---PDCYAVAGALSACT--RLGALDLGRQAIRMVDWDE 782
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 166/416 (39%), Gaps = 65/416 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
A + Y+ G++ AR+VFD+M +D V+W M+ GY N A +LF M K
Sbjct: 690 TAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 749
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLE-----KNEISWNGLLAAYVQNGRIEEACM 206
D + LS + G D R+ RM++ N + L+ Y + G EA +
Sbjct: 750 PDCYAVAGALSACTRLGALDLGRQAI-RMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 808
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI--------TGY 257
+F+ +++ WN+++ G A + +M +++ NT I TG
Sbjct: 809 VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGL 868
Query: 258 AQNN--YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNA 314
Q+ Y +L+ +P + + MV + G + EA + D MP N V A
Sbjct: 869 IQDGRRYFHNMTKLYHISP--RIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 926
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++ G + ++A + + + + WN SG N+
Sbjct: 927 LLGGCKIHRNTELAEHVLKQLIL--LEPWN--------SGNYVMLSNI------------ 964
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-------KQ 427
Y+ G ED+ +L ++MK G + + P S + + +G Q
Sbjct: 965 ------YSNRGRWEDAAKLRLDMKAKG--VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 1016
Query: 428 LHGQLVKVGFEAGC--FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
++ +L ++G E + +VM+ EE H +K I++N +I G
Sbjct: 1017 IYKKLDELGLEMKTMGYEPTTEVVMFDV--EDEEKEHTLVHHSEKLAIAFNLLITG 1070
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/658 (36%), Positives = 363/658 (55%), Gaps = 23/658 (3%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-----NEISWNGLLAA-- 194
A+N+F +P+ ++ WNT++ GYA + + IF ML N+ ++ L A
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184
Query: 195 ---YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
+ G + M+ ++ + ++ NSL+ + A +F MP +D VSWN
Sbjct: 185 RLKVLHLGSVLHG-MVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWN 243
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPE- 306
MI +A +A LF+E +KDV T +++S + ++ R I +
Sbjct: 244 AMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN 303
Query: 307 ---KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
++ + NAM+ YV+ ++ A++LF M+ K++ SW TM+ G+A+ G A +F
Sbjct: 304 GFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIF 363
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASL 422
D MP +W A+I+ Y Q+G +L LF EM+ + + + L A L ++
Sbjct: 364 DAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAI 423
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+ G +H + K C + +LL MY KCG++ +A F + KDV W+ MI
Sbjct: 424 DFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGAL 483
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A +G GK AL LF SM IKP+ +T IL AC+H GLV +G + F M YG++P
Sbjct: 484 AMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQ 543
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY C+VD+ GRAG L++A + ++ MP P AA WGALLGAC +G ELAE A + +
Sbjct: 544 IQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLL 603
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+EP N G +VLLSN+YA +G W VS +R MRD VKK S ++V VH F VGD
Sbjct: 604 ELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGD 663
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK--EHMLRYHSEKLAVAYGI 720
HP +IY+ L+E+ K K G+ +L + EE+ E L HSEKLA+A+G+
Sbjct: 664 NSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQ-LSEEDNLMEQSLNVHSEKLAIAFGL 722
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S + +PIR++KN+R+C DCH K +S++ R I+LRD RFHHF GG CSC DYW
Sbjct: 723 ISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 177/392 (45%), Gaps = 45/392 (11%)
Query: 246 DEVSWNTMITGYAQNNY--LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
D + + ++T YA ++ L A+ +F + P +++ W ++ GY + ++ +IF
Sbjct: 103 DPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLH 162
Query: 304 M-------PEKNTVSWNAMIAGYVQTKRMDMARE--LFEAMTCKNVASWNTMITGYAQSG 354
M P K T + A ++ + + +A ++ N++I Y SG
Sbjct: 163 MLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSG 222
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
A +F MP D +SW A+I +A G + +L LF EM+ + N SVLS
Sbjct: 223 APDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLS 282
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA LE G+ + + GF + NA+L MY KCG + +A F ++ +KD++S
Sbjct: 283 ACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVS 342
Query: 475 WNTMIAGYARHGFGKDALMLFESMK--------------------------------TVG 502
W TM+ G+A+ G +A +F++M +
Sbjct: 343 WTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKD 402
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
KPD++T++ L A + G ++ G + + + + + N T ++D+ + G L++A
Sbjct: 403 AKPDEVTLICALCASAQLGAIDFG-HWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKA 461
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ + D W A++GA +YG+ + A
Sbjct: 462 MEVFHAVE-RKDVYVWSAMIGALAMYGQGKAA 492
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 201/472 (42%), Gaps = 63/472 (13%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-------PQRDLVSWNV 128
C A +VFN +P+ + +N +I GY + + +F M P + ++
Sbjct: 121 CLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNK--FTFPF 178
Query: 129 MISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
+ R K L L M+ K D+ N++++ Y +G D A R+F M K+
Sbjct: 179 LFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKD 238
Query: 185 EISWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+SWN ++ A+ G ++A +LF+ V++ S++ K+ L +WI
Sbjct: 239 VVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICS 298
Query: 241 RMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+ + N M+ Y + + +A+ LF + KD+ +WT M+ G+ + G DE
Sbjct: 299 YIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDE 358
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-------------TCKNVAS- 342
A IFDAMP K T +WNA+I+ Y Q + +A LF M C AS
Sbjct: 359 AHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASA 418
Query: 343 ---------W-----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
W +++ YA+ G + A +F + + D W+A
Sbjct: 419 QLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSA 478
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV- 435
+I A G + +L LF M + N FT++L C + + G+QL Q+ +
Sbjct: 479 MIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLY 538
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
G ++ ++ + G +E+A E++ + W ++ +RHG
Sbjct: 539 GIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHG 590
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 11/265 (4%)
Query: 346 MITGYAQSGE--ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGE 402
++T YA S + +A+N+F+++PQ + W +I GYA S S +F+ M E
Sbjct: 110 LLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSE 169
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
N+ F + + L L LG LHG ++K + F+ N+L+ Y G+ + A+
Sbjct: 170 FPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHR 229
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F + KDV+SWN MI +A G AL+LF+ M+ +KP+ ITMV +LSAC+
Sbjct: 230 VFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKID 289
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+E G + S + G + M+D+ + G +++A++L M E D +W +L
Sbjct: 290 LEFG-RWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMS-EKDIVSWTTML 347
Query: 583 -GACRLYGKTELAEKAAEVIFEMEP 606
G +L E A IF+ P
Sbjct: 348 DGHAKLGNYDE-----AHCIFDAMP 367
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 166/388 (42%), Gaps = 60/388 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I + +G D A VF +MP + VS+NAMI+ + L G D A +F +M
Sbjct: 207 DLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEME 266
Query: 120 QRD---------------------------------------LVSWNVMISGYVRNKSLS 140
+D L+ N M+ YV+ ++
Sbjct: 267 MKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCIN 326
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
A++LF M ++D+VSW TML G+A+ G D A IFD M K +WN L++AY QNG+
Sbjct: 327 DAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGK 386
Query: 201 IEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN---- 251
A LF A + V+ + + + WI + D ++ N
Sbjct: 387 PRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHD-INLNCHLA 445
Query: 252 -TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE---- 306
+++ YA+ L +A +F KDV+ W+AM+ G+ A +F +M E
Sbjct: 446 TSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIK 505
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARN 361
N V++ ++ ++ +LFE M + + ++ + ++G + A +
Sbjct: 506 PNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAAS 565
Query: 362 LFDRMPQHDCIS-WAAIIAGYAQSGYSE 388
++MP + W A++ ++ G E
Sbjct: 566 FIEKMPIPPTAAVWGALLGACSRHGNVE 593
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 401 GERLNRSPFTSVL---STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC--KCG 455
GE+ N T++L C N L KQ+H +++ + + LL Y C
Sbjct: 64 GEKGNEVESTNILEFIDQCTNTMQL---KQIHAHMLRTSRFCDPYTASKLLTAYAISSCS 120
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGIL 514
+ A + F +I ++ WNT+I GYA + ++F M + P+ T +
Sbjct: 121 CLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLF 180
Query: 515 SACS-----HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
A S H G V G S++ D ++ NS +++ G +G D A + NM
Sbjct: 181 KAASRLKVLHLGSVLHGMVIKASLSSDLFIL-NS-----LINFYGSSGAPDLAHRVFTNM 234
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA--GMYVLLSNLYAAS----- 622
P + D +W A++ A L G L +KA + EME ++ + ++S L A +
Sbjct: 235 PGK-DVVSWNAMINAFALGG---LPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDL 290
Query: 623 --GRW 625
GRW
Sbjct: 291 EFGRW 295
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/558 (41%), Positives = 330/558 (59%), Gaps = 22/558 (3%)
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQ 290
A+ +F+++P + N++I GY N +A Q + + D FT+ ++ +
Sbjct: 31 ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL---FKS 87
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDM---------ARELFEAMTCKNVA 341
G + E + + ++ Y+Q M+M AR++F+ M K+V
Sbjct: 88 CGVLCEGKQL-----HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142
Query: 342 SWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
SW TMI YAQ A LF RM + W +I G+ + E++L LF EM+
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
G + ++ S+L C +L +LELGK LH + K E +G AL+ MY KCGS+E A
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F+E+ +KDV++W +I G A G G AL LF M+ +KPD IT VG+L+ACSH
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 322
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
GLV +G YF SM YG+ P+ +HY CMVD+LGRAGR+ EA++L++NMP PD
Sbjct: 323 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 382
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
LL ACR++G +AE+AA+ + E++P+N G YVLLSN+Y++ W K+R M +R +
Sbjct: 383 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGE 700
KK G S +EV VH F GD HP+ IY L+++ +LK G+V VL D+ E
Sbjct: 443 KKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 502
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
+EKE+ L HSEKLA+A+G+LS G PIRV+KNLRVC DCH+A+K IS++ R II+RD
Sbjct: 503 KEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRD 562
Query: 761 NNRFHHFSGGSCSCGDYW 778
NRFHHF+ GSCSC D+W
Sbjct: 563 RNRFHHFTKGSCSCRDFW 580
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG + +AR +F+++P + +II GY ++ + M G +R F S+
Sbjct: 25 SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 84
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
+C L GKQLH K+GF + ++ N L+ MY CG + A F+++V+K V
Sbjct: 85 FKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 141
Query: 473 ISWNTMIAGYAR---------------------------HGFGKD-----ALMLFESMKT 500
+SW TMI YA+ +G +D AL LF M+
Sbjct: 142 VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQL 201
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G+K D +TM +L AC+H G +E G ++ + + + T +VD+ + G ++
Sbjct: 202 SGVKGDKVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 260
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
A + + MP E D TW AL+ + G+ KA E+ EM+
Sbjct: 261 SAMRVFQEMP-EKDVMTWTALIVGLAMCGQ---GLKALELFHEMQ 301
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 146/336 (43%), Gaps = 50/336 (14%)
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY----------------LLNGQLD 109
VA +G A VFN +P ++ + N++I GY +L G LD
Sbjct: 17 VAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQG-LD 75
Query: 110 PARQVFDQMPQRDLVSWNVMISG---YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
P R F + S V+ G + + L A D NT+++ Y+
Sbjct: 76 PDRFTFPSL----FKSCGVLCEGKQLHCHSTKLGFAS---------DAYIQNTLMNMYSN 122
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANWEVVSWNSLM 223
G +AR++FD+M+ K+ +SW ++ AY Q EA LF E +N + WN ++
Sbjct: 123 CGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASN--LFCWNIMI 180
Query: 224 GGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL---FEEAPVK 276
G V+ +A +F+ M + D+V+ +++ L + L E+ ++
Sbjct: 181 NGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIE 240
Query: 277 -DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
DV TA+V Y + G ++ A +F MPEK+ ++W A+I G + A ELF M
Sbjct: 241 VDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM 300
Query: 336 TCKNVA----SWNTMITGYAQSGEITHARNLFDRMP 367
V ++ ++ + +G + F+ MP
Sbjct: 301 QMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMP 336
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 119/312 (38%), Gaps = 62/312 (19%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-QRDL 123
N + + GC SA VF+ M +S VS+ MI Y A ++F +M +L
Sbjct: 114 NTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNL 173
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIFDR 179
WN+MI+G+V + A +LF M K D V+ ++L G + +
Sbjct: 174 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK----- 228
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
W L Y++ +IE +V +L+ + K + A +F
Sbjct: 229 --------W---LHVYIEKEKIE-----------VDVALGTALVDMYAKCGSIESAMRVF 266
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVD 295
MP +D ++W +I G A +A LF E + D T+ +++ G V+
Sbjct: 267 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 326
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE 355
E F++MP K + ++ + M+ ++G
Sbjct: 327 EGIAYFNSMPNKYGIQ--------------------------PSIEHYGCMVDMLGRAGR 360
Query: 356 ITHARNLFDRMP 367
I A +L MP
Sbjct: 361 IAEAEDLIQNMP 372
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 118/267 (44%), Gaps = 23/267 (8%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPAR----QVF 115
WN+ I H+ + + AL +FN M + V+ +++ G L+ + +
Sbjct: 176 WNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIE 235
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ + D+ ++ Y + S+ +A +F+ MP++DV++W ++ G A G A
Sbjct: 236 KEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALE 295
Query: 176 IFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW-----EVVSWNSLMGGF 226
+F M ++ + I++ G+LAA G + E F S N + + ++
Sbjct: 296 LFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDML 355
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ---NNYLAE--AQRLFEEAPVKDVFTW 281
+ R+ +A+ + MP+ + + + N +AE AQ+L E P K+ T+
Sbjct: 356 GRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDP-KNGGTY 414
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ + Y + A+ + + M E+N
Sbjct: 415 VLLSNIYSSMKNWEAAKKMRELMVERN 441
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 448 LVMYC---KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
+V +C GS+ A F +I + + N++I GY + A++ ++ M G+
Sbjct: 16 IVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLD 75
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD T + +C G++ +G + + + G ++ ++++ G L A+
Sbjct: 76 PDRFTFPSLFKSC---GVLCEGKQ-LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARK 131
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME-PENAGMYVLLSNLYAASG 623
+ M +W ++GA Y + +L +A ++ ME N + ++ N +
Sbjct: 132 VFDKM-VNKSVVSWATMIGA---YAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDS 187
Query: 624 RWGDVSKVRLKMRDRGVK--KVTGYSWLEVQNKVHTFSVGDTLHP--EKDRI 671
+ + + +M+ GVK KVT S L + +G LH EK++I
Sbjct: 188 DYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKI 239
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/870 (30%), Positives = 432/870 (49%), Gaps = 114/870 (13%)
Query: 10 LHSSCILHQHTQSINRLQSPANTNPY------PSKKTLKRHLNSKSRNKPKPAGDWDIRQ 63
LHS +LH+ + + L S A N Y ++ + + S+ + D+
Sbjct: 252 LHS--LLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQ--------ELDLVS 301
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNG-QLDPAR----QV 114
WN I+ + G A+ +F + R +SV+ +++ +G AR ++
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRI 361
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAA 173
++ RD+V N +IS Y + SAA +F + K DV+SWNTML
Sbjct: 362 WESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKV 421
Query: 174 RRIFDRML----EKNEISWNGLLAAYVQN-----GRIEEACMLFESKANWEVVSWNSLMG 224
F ML + N++S+ +L A + GR + +L + E L+
Sbjct: 422 VNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVS 481
Query: 225 GFVKQKRLGDAKWIFDRMPV--RDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDV 278
+ K + +A+ +F MP+ R V+WN M+ YAQN+ EA + + + D
Sbjct: 482 MYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541
Query: 279 FTWT-------------------------------AMVSGYVQNGKVDEARMIFDAMPEK 307
++T A++S + + ++++AR +F+ M
Sbjct: 542 LSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHG 601
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TC------------- 337
+ VSW AM++ + + LF M TC
Sbjct: 602 DVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIH 661
Query: 338 ---------KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
++A N ++ Y+ G+ A + F+ M D +SW + A YAQ+G ++
Sbjct: 662 ACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAK 721
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+++ LF +M+ G + ++ F++ L+ A + GK H + G ++ V L+
Sbjct: 722 EAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLV 781
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
+Y KCG ++EA F D V+ N +I A+HGF ++A+ +F M+ G++PD
Sbjct: 782 KLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVA 841
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T+V I+SAC H G+VE+G F +M +G+ P +HY C VDLLGRAG+L+ A+ +++
Sbjct: 842 TLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRK 901
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
MPFE + W +LLG C+L G EL E+ A+ I E++P N+ +V+LSN+Y A+G+W D
Sbjct: 902 MPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDA 961
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
R KM D VK G SW E+ +VH F GD HP+ D IY L++LE +++ G+
Sbjct: 962 DVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYE 1021
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
L DV +E KE L YHSE++A+A+G+++ P ++++KNLRVC DCH A K+I
Sbjct: 1022 ADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKYI 1078
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S ++GR II+RD+ RFHHFS G+CSC D W
Sbjct: 1079 SMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 227/507 (44%), Gaps = 74/507 (14%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
LE++ N L+ YV+ G +EEA +F VVSW +L+ + A +F
Sbjct: 56 LEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFR 115
Query: 241 RMPVRDEVSWNT-----MITGYAQNNYLAEAQRL--------FEEAPVKDVFTWTAMVSG 287
M + + N+ M+ A + LA + + E A AM++
Sbjct: 116 TMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINM 175
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR-----MDMARELFEAMTCKNVAS 342
Y + G +++A +F A+PEK+ VSW AM Y Q +R + + RE+ NV +
Sbjct: 176 YAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVIT 235
Query: 343 W--------------------------------NTMITGYAQSGEITHARNLFDRMPQH- 369
+ N +I Y + G+ A ++F M
Sbjct: 236 FITALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQ 295
Query: 370 --DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG-- 425
D +SW A+I+ ++G D++ +F ++ G R N ++L+ A + ++ G
Sbjct: 296 ELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAA-SGVDFGAA 354
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNTMI-AGYA 483
+ HG++ + G+ +GNA++ MY KCG A+ F I K DVISWNTM+ A
Sbjct: 355 RGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASED 414
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE---YFYSMNRDYGVI 540
R FGK + F M GI P+ ++ + IL+ACS++ ++ G + + RDY
Sbjct: 415 RKSFGK-VVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY--- 470
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA-ATWGALLGACRLYGKTELAEKAAE 599
S T +V + G+ G + EA+ + K MP + TW +LGA Y + + +++A
Sbjct: 471 VESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFG 527
Query: 600 VIFEM-----EPENAGMYVLLSNLYAA 621
+ EM P+ +LS+ Y +
Sbjct: 528 ALMEMLQGGVLPDALSFTSVLSSCYCS 554
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 138/575 (24%), Positives = 248/575 (43%), Gaps = 74/575 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL--SAARNLFEMMPK-- 151
NAMI+ Y G L+ A VF +P++D+VSW M Y + + A R EM+ +
Sbjct: 170 NAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPL 229
Query: 152 -RDVVSWNTMLSGYAQNGYADAA---RRIFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
+V+++ T L A D + + L + ++ N L+ Y + G E A +
Sbjct: 230 APNVITFITALG--ACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSV 287
Query: 208 FE---SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQN 260
F+ S+ ++VSWN+++ V+ R GDA IF R+ + + V+ T++ A +
Sbjct: 288 FKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAAS 347
Query: 261 NYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNA 314
A R F E ++DV A++S Y + G A +F + K + +SWN
Sbjct: 348 GVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNT 407
Query: 315 MIAGYVQTKRMDMARELFEAM-----------------TCKNVASWN------------- 344
M+ K F M C N + +
Sbjct: 408 MLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467
Query: 345 ----------TMITGYAQSGEITHARNLFDRM--PQHDCISWAAIIAGYAQSGYSEDSLR 392
+++ Y + G I+ A +F M P ++W ++ YAQ+ S+++
Sbjct: 468 RDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
+EM + G + FTSVLS+C S E + L +++ G+ + C + AL+ M+
Sbjct: 528 ALMEMLQGGVLPDALSFTSVLSSC--YCSQE-AQVLRMCILESGYRSAC-LETALISMHG 583
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
+C +E+A F E+ DV+SW M++ A + K+ LF M+ G+ PD T+
Sbjct: 584 RCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLAT 643
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
L C + + G + ++ + G+ + ++++ G EA + + M
Sbjct: 644 TLDTCLASTTLGLG-KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMK-A 701
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
D +W + A Y + LA++A + +M+ E
Sbjct: 702 RDLVSWNIMSAA---YAQAGLAKEAVLLFRQMQLE 733
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 7/181 (3%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+T++L +C + L GK H + G E F+GN L+ MY +CGS+EEA+ F ++
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGLVEKGT 527
+++V+SW +I+ A+ G A LF +M P+ T+V +L+AC+++ + G
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 528 EYFYSMNRDYGVIPNSKHYT----CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
++M + G+ S T M+++ + G L++A + +P E D +W A+ G
Sbjct: 148 S-IHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP-EKDVVSWTAMAG 205
Query: 584 A 584
A
Sbjct: 206 A 206
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 258/726 (35%), Positives = 374/726 (51%), Gaps = 98/726 (13%)
Query: 139 LSAARNLFE-MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
L RNL + + +RD+++ + + Y F ++ + N Y +
Sbjct: 9 LQTFRNLLKACIAQRDLITGKILHALY------------FKSLIPPSTYLSNHFTLLYSK 56
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
G + A F V S+N+L+ + K + A+ +FD +P D VS+NT+I Y
Sbjct: 57 CGSLHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAY 116
Query: 258 AQNNYLAEAQRLFEEAPVK----DVFTWTAMVSG-------------------------- 287
A RLFEE D FT + +++
Sbjct: 117 ADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASV 176
Query: 288 -------YVQNGKVDEARMIFDAMPE---KNTVSWNAMIAGYVQTK-------------- 323
Y + G + EAR +F M E ++ VSWNAMI Q +
Sbjct: 177 NNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVR 236
Query: 324 ---RMDM--ARELFEAMTC--------------------KNVASWNTMITGYAQ-SGEIT 357
++DM + A TC N + +I Y++ +G +
Sbjct: 237 RGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMV 296
Query: 358 HARNLFDRMPQHDCISWAAIIAGYA-QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
R +F+ + D + W +I+G++ SED L F EM+R G R + F V S C
Sbjct: 297 ECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSAC 356
Query: 417 ANLASLELGKQLHGQLVKVGFEAG-CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
+NL+S LGKQ+H +K V NAL+ MY KCG+V +A F+ + + + +S
Sbjct: 357 SNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSL 416
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N+MIAGYA+HG ++L LFE M I P+ IT + +LSAC HTG VE+G +YF M
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
+ + P ++HY+CM+DLLGRAG+L EA+ +++ MPF P + W LLGACR +G ELA
Sbjct: 477 RFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAV 536
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
KAA +EP NA YV+LSN+YA++ RW + + V+ MR+RGVKK G SW+E+ KV
Sbjct: 537 KAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKV 596
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL---HDVGEEEKEHMLRYHSE 712
H F DT HP I+ Y+ ++ K+KQ G+V + L +V +E+E L YHSE
Sbjct: 597 HVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSE 656
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLAVA+G++S G PI V+KNLR+C DCHNA+K IS + GR I +RD +RFH F G C
Sbjct: 657 KLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHC 716
Query: 773 SCGDYW 778
SC DYW
Sbjct: 717 SCRDYW 722
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/577 (22%), Positives = 233/577 (40%), Gaps = 127/577 (22%)
Query: 84 FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
F S+ S+ N Y G L A+ F ++ S+N +I+ Y ++ + AR
Sbjct: 36 FKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIAR 95
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQN- 198
+F+ +P+ D+VS+NT+++ YA G R+F+ + E + + +G++ A +
Sbjct: 96 RVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDV 155
Query: 199 GRIEEA-CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV---RDEVSWNTMI 254
G + + C + + N+++ + ++ L +A+ +F M RDEVSWN MI
Sbjct: 156 GLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMI 215
Query: 255 TGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGY---------------------- 288
Q+ EA LF E + D+FT ++++ +
Sbjct: 216 VACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFH 275
Query: 289 ----VQNGKVD----------EARMIFDAMPEKNTVSWNAMIAGYVQTKRM--------- 325
V +G +D E R +F+ + + V WN MI+G+ + +
Sbjct: 276 GNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFR 335
Query: 326 DMARELFE---------AMTCKNVASW-----------------------NTMITGYAQS 353
+M R F C N++S N ++ Y++
Sbjct: 336 EMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKC 395
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + AR +FD MP+H+ +S ++IAGYAQ G +SLRLF M N F +VL
Sbjct: 396 GNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVL 455
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S C + +E G++ N + +C ++ +
Sbjct: 456 SACVHTGKVEEGQKYF---------------NMMKERFC---------------IEPEAE 485
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
++ MI R G K+A + E+M P I +L AC G VE + +
Sbjct: 486 HYSCMIDLLGRAGKLKEAERIIETMP---FNPGSIEWATLLGACRKHGNVELAVK---AA 539
Query: 534 NRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
N + P N+ Y + ++ A R +EA + + M
Sbjct: 540 NEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLM 576
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 179/437 (40%), Gaps = 99/437 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ +N I + ++ A VF+ +P+ VSYN +I+ Y G+ P ++F+++
Sbjct: 74 NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133
Query: 120 QRDLVSWNVMISGYVR----NKSLSAARNLFEMMPKRDVVSW--NTMLSGYAQNGYADAA 173
+ L +SG + + L + F ++ D + N +L+ Y++ G+ A
Sbjct: 134 ELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEA 193
Query: 174 RRIFDRMLE---KNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVSWNSLMGGF 226
RR+F M E ++E+SWN ++ A Q+ EA LF ++ + S++ F
Sbjct: 194 RRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAF 253
Query: 227 VKQKRL------------------------------------GDAKWIFDRMPVRDEVSW 250
K L + + +F+ + D V W
Sbjct: 254 TCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLW 313
Query: 251 NTMITGYAQNNYLAE-----------------------------------------AQRL 269
NTMI+G++ L+E A +
Sbjct: 314 NTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAI 373
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+ P V A+V+ Y + G V +AR +FD MPE NTVS N+MIAGY Q +
Sbjct: 374 KSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESL 433
Query: 330 ELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAG 380
LFE M K++A ++ +++ +G++ + F+ M + CI ++ +I
Sbjct: 434 RLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDL 493
Query: 381 YAQSGYSEDSLRLFIEM 397
++G +++ R+ M
Sbjct: 494 LGRAGKLKEAERIIETM 510
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
AL + + +P NA+++ Y G + AR+VFD MP+ + VS N MI+GY ++
Sbjct: 370 ALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVE 429
Query: 140 SAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNG 190
+ LFE+M ++D+ +++ +LS G + ++ F+ M E+ I ++
Sbjct: 430 VESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSC 489
Query: 191 LLAAYVQNGRIEEACMLFESKA-NWEVVSWNSLMGGFVKQ 229
++ + G+++EA + E+ N + W +L+G K
Sbjct: 490 MIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKH 529
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 82/216 (37%), Gaps = 38/216 (17%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L F ++L C L GK LH K ++ N ++Y KCGS+ A +
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 464 FEEIVDKDVISWNTMIAGYARH-------------------------------GFGKDAL 492
F +V S+NT+I YA+H G L
Sbjct: 67 FHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTL 126
Query: 493 MLFESMKTVGIKPDDITMVGILSAC-SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
LFE ++ + + D T+ G+++AC GLV + + D N+ C
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLAC--- 183
Query: 552 LLGRAGRLDEAQNLMKNMPFEP--DAATWGALLGAC 585
R G L EA+ + + M D +W A++ AC
Sbjct: 184 -YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVAC 218
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N + + + G A VF++MP ++VS N+MI+GY +G + ++F+ M ++D+
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIA 445
Query: 124 ---VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS-----WNTMLSGYAQNGYADAARR 175
+++ ++S V + + F MM +R + ++ M+ + G A R
Sbjct: 446 PNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAER 505
Query: 176 IFDRM-LEKNEISWNGLLAAYVQNGRIEEA 204
I + M I W LL A ++G +E A
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHGNVELA 535
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/720 (34%), Positives = 404/720 (56%), Gaps = 43/720 (5%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV----RNKSLSAARNLFEMMP--- 150
MI+ + G+ A +++ +M +R +V+ +++ V + ++L R L E +
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 151 -KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
+ D+ +L YA+ G D A+R+F+ M K+ +W+ ++AAY + GR E A +L+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 210 ----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQNN 261
VV++ +GG L D + I R+ +D+V ++++ Y + +
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA----MIA 317
+ EA+++FE ++V ++TAM+S YVQ G+ EA +F M + + NA I
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 318 GYVQ-TKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
G V+ ++ R++ + + NV N ++T Y + G AR +FD M + I
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
SW ++IA YAQ G +++L LF KR + F+S L+ CA L +L+ G+++H ++
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLF---KRMDVEPSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
V+ A + +LL MY +CGS+++A F + +D S N MIA + +HG K AL
Sbjct: 358 VEANL-ASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQAL 416
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
++ M+ GI D IT V +L ACSHT LV ++ S+ D+GV+P +HY CMVD+
Sbjct: 417 RIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDV 476
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGR+GRL +A+ L++ MP++ DA W LL C+ +G + E+AA +FE+ P Y
Sbjct: 477 LGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPY 536
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK---- 668
V LSN+YAA+ R+ D +VR +M +RGV + S++E+ N++H F+ G ++
Sbjct: 537 VFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDG 596
Query: 669 ---DRIYAYLEELEFKLKQDGFVYSTKLVLHD----VGEEEKEHMLRYHSEKLAVAYGIL 721
+R+ + L EL +KQ G+V T+ V + EEEK+ L +HSE+LA+AYG++
Sbjct: 597 RTMERVRSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLI 656
Query: 722 SIP---AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ RP+RV+ + RVC CH+AIK +S I + I +RD +RFHHF G+CSCGD+W
Sbjct: 657 AAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 201/450 (44%), Gaps = 64/450 (14%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
A++ Y G LD A++VF+ M +DL +W+ +I+ Y R A L+ M +
Sbjct: 69 TALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVE 128
Query: 152 RDVVSWNTMLSGYAQ-NGYADA----------------------------------ARRI 176
+VV++ L G A G AD AR++
Sbjct: 129 PNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKV 188
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN-----SLMGGFVKQKR 231
F+ M +N S+ +++AYVQ G EA LF + E + N +++G
Sbjct: 189 FEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGN 248
Query: 232 LGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
L + + + R + V N ++T Y + EA+++F+ ++V +WT+M++
Sbjct: 249 LEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAA 308
Query: 288 YVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS---W 343
Y Q+G EA +F M E + VS+++ + +D RE+ + N+AS
Sbjct: 309 YAQHGNPQEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQME 368
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
++++ YA+ G + AR +F+RM D S A+IA + Q G + +LR++ +M++ G
Sbjct: 369 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIP 428
Query: 404 LNRSPFTSVLSTCANLASLELGKQL-------HGQLVKVGFEAGCFVGNALLVMYCKCGS 456
+ F SVL C++ + + + HG +V + C V +L + G
Sbjct: 429 ADGITFVSVLVACSHTSLVADCRDFLQSLVMDHG-VVPLVEHYLCMVD--VLGRSGRLGD 485
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
EE D ++W T+++G RHG
Sbjct: 486 AEELVETMP--YQADAVAWMTLLSGCKRHG 513
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 163/362 (45%), Gaps = 56/362 (15%)
Query: 80 ALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
A+H + S + V +++++ YL ++ AR+VF+ M R++ S+ MIS YV+
Sbjct: 152 AIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAG 211
Query: 138 SLSAARNLFEMMPK----------------------------------------RDVVSW 157
+ A LF M K +VV
Sbjct: 212 EHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQ 271
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-KANWEV 216
N +++ Y + G AR++FD M +N ISW ++AAY Q+G +EA LF+
Sbjct: 272 NALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEPSG 331
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS---WNTMITGYAQNNYLAEAQRLFEEA 273
VS++S + L + + I R+ + S ++++ YA+ L +A+R+F
Sbjct: 332 VSFSSALNACALLGALDEGREIHHRVVEANLASPQMETSLLSMYARCGSLDDARRVFNRM 391
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR 329
+D F+ AM++ + Q+G+ +A I+ M ++ + +++ +++ T + R
Sbjct: 392 KTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCR 451
Query: 330 ELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQ 383
+ +++ + V + M+ +SG + A L + MP Q D ++W +++G +
Sbjct: 452 DFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKR 511
Query: 384 SG 385
G
Sbjct: 512 HG 513
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP-- 150
V NA+++ Y G AR+VFD M R+++SW MI+ Y ++ + A NLF+ M
Sbjct: 269 VVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVE 328
Query: 151 -------------------------KRDVVSWN--------TMLSGYAQNGYADAARRIF 177
VV N ++LS YA+ G D ARR+F
Sbjct: 329 PSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQMETSLLSMYARCGSLDDARRVF 388
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLG 233
+RM ++ S N ++AA+ Q+GR ++A ++ + +++ S++ +
Sbjct: 389 NRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVA 448
Query: 234 DAK-----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSG 287
D + + D V + M+ ++ L +A+ L E P + D W ++SG
Sbjct: 449 DCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSG 508
Query: 288 YVQNGKVDE----ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
++G +D AR +F+ P + T+ + + Y KR D AR + + M + V
Sbjct: 509 CKRHGDLDRGERAARKVFELAPAE-TLPYVFLSNMYAAAKRFDDARRVRKEMEERGV 564
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 45/156 (28%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ------- 120
++ + R G D A VFN M R + S NAMI+ + +G+ A +++ +M Q
Sbjct: 372 LSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADG 431
Query: 121 -------------------RDLVSWNVMISGYV--------------RNKSLSAARNLFE 147
RD + VM G V R+ L A L E
Sbjct: 432 ITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVE 491
Query: 148 MMP-KRDVVSWNTMLSGYAQNGYAD----AARRIFD 178
MP + D V+W T+LSG ++G D AAR++F+
Sbjct: 492 TMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFE 527
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/536 (40%), Positives = 332/536 (61%), Gaps = 11/536 (2%)
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G V+Q R+ A + V N ++ YA+ L +A+R+F+E P KD+ TWTA+
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 285 VSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-- 338
++G+ QN + +A ++F M + N + ++++ +D +L A K
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQL-HAFCLKYG 219
Query: 339 ---NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
+V + ++ YA+ G + A+ FD MP +SW A+I+G+A+ G E +L L
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLW 279
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
+M+R + ++SV S CA++ +LE GK +H ++K G + F+GN LL MY K G
Sbjct: 280 KMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
S+++A F+ +V DV+SWNTM+ G A+HG GK+ L FE M +GI+P++I+ + +L+
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH+GL+++G Y++ + + Y V P+ HY VDLLGR G LD A+ ++ MP EP A
Sbjct: 400 ACSHSGLLDEGL-YYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTA 458
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
A WGALLGACR++ EL AAE FE++P ++G +LLSN+YA++GRW DV+KVR M
Sbjct: 459 AVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMM 518
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
++ GVKK SW+E++N VH F D HP+ I EE+ K+K+ G+V T VL
Sbjct: 519 KESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVL 578
Query: 696 HDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
V ++E+E L+YHSEKLA+A+ +L+ P G PIR+ KN+RVC DCH AIK +SKI
Sbjct: 579 LFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKI 634
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 156/321 (48%), Gaps = 22/321 (6%)
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G + G++ A V LV N++++ Y + L AR +F+ MP +D+V+W +
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 161 LSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML--FESKANW 214
++G++QN A +F +M L+ N + + LL A ++ L F K +
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 215 E--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ V ++L+ + + + A+ FD MP + EVSWN +I+G+A+ A L +
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 273 APVKDV----FTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
K+ FT++++ S G ++ GK A MI + + N ++ Y +
Sbjct: 281 MQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIG-NTLLDMYAKAG 339
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIA 379
+D A+ +F+ + +V SWNTM+TG AQ G + F++M + + IS+ ++
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399
Query: 380 GYAQSGYSEDSLRLFIEMKRY 400
+ SG ++ L F MK+Y
Sbjct: 400 ACSHSGLLDEGLYYFELMKKY 420
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 149/342 (43%), Gaps = 27/342 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+ + + + GC D A +F+ MP + V++ A+I+G+ N + A +F QM + L
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQ 186
Query: 125 SWNVMISGYVR----NKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRI 176
+ +S ++ L L K V + ++ YA+ G+ DAA+
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--ESKANWEVV--SWNSLMGGFVKQKRL 232
FD M K+E+SWN L++ + + G E A L + N++ +++S+ L
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGAL 306
Query: 233 GDAKWIFDRMPVRDEVSW-----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
KW+ M ++ + NT++ YA+ + +A+R+F+ DV +W M++G
Sbjct: 307 EQGKWVHAHM-IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTG 365
Query: 288 YVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKN 339
Q+G E F+ M E N +S+ ++ + +D FE M +
Sbjct: 366 CAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPD 425
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
V + T + + G + A MP + W A++
Sbjct: 426 VPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGA 467
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQMP 119
WN I+ H R G + ALH+ M R+ + +Y+++ S G L+ + V M
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMI 317
Query: 120 QR--DLVSW--NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ L+++ N ++ Y + S+ A+ +F+ + K DVVSWNTML+G AQ+G
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 176 IFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV-------VSWNSLMG 224
F++ML E NEIS+ +L A +G ++E FE ++V V++ L+G
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLG 437
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLA----EAQRLFEEAP 274
+ L A+ MP+ + W ++ + + A+R FE P
Sbjct: 438 ---RVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDP 489
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/663 (36%), Positives = 376/663 (56%), Gaps = 35/663 (5%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
N++I Y + A +F + ++V SW ML+ +A+N R FDR +
Sbjct: 14 NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAEN-------RDFDRCW----L 62
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
+ G+L + G + + L E+ +G ++ LG + +
Sbjct: 63 FFRGMLLQGINPGEVGISIFLSACTDAREIT-----IGRSIQLAILGTG--------IEE 109
Query: 247 E-VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM- 304
E + +++ Y + + +A +F +DV W+AMV+ Y +NG EA +F M
Sbjct: 110 ESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMD 169
Query: 305 -----PEKNT-VSWNAMIAGYVQTKRMDMARELFEAMTCKN-VASWNTMITGYAQSGEIT 357
P K T VS A + + + EA ++ V ++ Y + G I
Sbjct: 170 LDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIE 229
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A F ++ + + ++W+AI A YA++ + D++R+ M G N + F SVL CA
Sbjct: 230 AAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACA 289
Query: 418 NLASLELGKQLHGQL--VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
+A+L+ G+++H ++ + G E+ +V AL+ MY KCG++ A + F++I D++ W
Sbjct: 290 AIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLW 349
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
N++IA A+HG + AL LFE M+ G++P IT +L ACSH G++++G ++F S
Sbjct: 350 NSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIG 409
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
D+G+ P ++H+ CMVDLLGRAG + ++++L+ +MPFEP W A LGACR Y + A
Sbjct: 410 DHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAI 469
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
AAE +F+++P YVLLSN+YA +GRW DV+++R M+ K G SW+EV+++V
Sbjct: 470 WAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRV 529
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLA 715
H F GD HP I+A L+ L +K G+V T++VLHDV +E KE M+ YHSEKLA
Sbjct: 530 HEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLA 589
Query: 716 VAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCG 775
+A+ +L+ P G PIRV+KNLRVC DCH A K ISK+V R I++RD NRFH F G+CSCG
Sbjct: 590 MAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCG 649
Query: 776 DYW 778
DYW
Sbjct: 650 DYW 652
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 190/390 (48%), Gaps = 15/390 (3%)
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+R+ N +I Y + + +A +F K+VF+WT M++ + +N D + F
Sbjct: 7 IRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRG 66
Query: 304 MPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGE 355
M + V + ++ + + + R + A+ + +++ Y + G
Sbjct: 67 MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGH 126
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
T A ++F RM D ++W+A++A YA++G+ ++L LF +M G N+ S L
Sbjct: 127 CTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDA 186
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
CA+L L G +H ++ G ++G VG AL+ +Y KCG +E A AF +IV+K+V++W
Sbjct: 187 CASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAW 246
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
+ + A YAR+ +DA+ + M G+ P+ T V +L AC+ +++G ++
Sbjct: 247 SAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHV 306
Query: 536 DYGVIPNSKH-YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
G + + + T +V++ + G L A N+ + D W +L+ +G+T
Sbjct: 307 LGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQHGQT--- 362
Query: 595 EKAAEVIFEMEPE--NAGMYVLLSNLYAAS 622
EKA E+ M E + S L+A S
Sbjct: 363 EKALELFERMRLEGLQPTIITFTSVLFACS 392
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 136/306 (44%), Gaps = 24/306 (7%)
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
L + + S+ A++S Y G A VF +M RD+V+W+ M++ Y RN
Sbjct: 100 LAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPR 159
Query: 141 AARNLFEMMPKRDVVSWN--TMLSGYAQNGYADAAR-------RIFDRMLEKNEISWNGL 191
A LF M D V+ N T++SG R R+ + ++ + L
Sbjct: 160 EALGLFRQM-DLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTAL 218
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DE 247
+ Y + GRIE A F VV+W+++ + + R DA + RM + +
Sbjct: 219 VNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNS 278
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPV------KDVFTWTAMVSGYVQNGKVDEARMIF 301
++ +++ A L + +R+ E V DV+ TA+V+ Y + G + A +F
Sbjct: 279 TTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMF 338
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEIT 357
D + + V WN++IA Q + + A ELFE M + + ++ +++ + +G +
Sbjct: 339 DKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLD 398
Query: 358 HARNLF 363
R F
Sbjct: 399 QGRKHF 404
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 158/383 (41%), Gaps = 45/383 (11%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSV--SYNAMIS-GYLLNGQLDP 110
D+ W+ + + RNG AL +F M P + ++ +A S G L +G L
Sbjct: 141 DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMH 200
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
R V Q Q +V +++ Y + + AA F + +++VV+W+ + + YA+N
Sbjct: 201 QR-VEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRN 259
Query: 171 DAARRIFDRM----LEKNEISWNGLL------AAYVQNGRIEEACMLFESKANWEVVSWN 220
A R+ RM L N ++ +L AA Q RI E + +V
Sbjct: 260 RDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLT 319
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVK 276
+L+ + K L A +FD++ D V WN++I AQ+ +A LFE E
Sbjct: 320 ALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 379
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDA-------MPEKNTVSWNAMI-----AGYVQTKR 324
+ T+T+++ G +D+ R F + PE + M+ AG++
Sbjct: 380 TIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAE--HFGCMVDLLGRAGWIVDSE 437
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ FE +A T G I A NLF P+ + + YA++
Sbjct: 438 DLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRA-PYVLLSNMYAKA 496
Query: 385 GYSED------SLRLFIEMKRYG 401
G D +++LF+ +K G
Sbjct: 497 GRWSDVARMRQAMQLFMTVKEAG 519
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/592 (37%), Positives = 336/592 (56%), Gaps = 39/592 (6%)
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
AY +G+I + LF + ++ + + + L D ++ + +++ N
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSQINPNEF 129
Query: 254 ITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ ++ +L +K D + T +V Y + G V A+ +FD MPE++
Sbjct: 130 TFSSILKSCSTKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERS 189
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
VS A MIT YA+ G + AR LFDRM +
Sbjct: 190 LVSSTA-------------------------------MITCYAKQGNVEAARALFDRMCE 218
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQ 427
D +SW +I GY+Q G+ D+L LF ++ G+ + + + LS C+ + +LE G+
Sbjct: 219 RDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRW 278
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
+H + V AL+ MY KCGS+EEA F + KD+++WN MI GYA HG+
Sbjct: 279 IHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGY 338
Query: 488 GKDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+DAL LF+ M+ + G++P DIT +G L AC+H GLV +G + F SM ++YG+ P +HY
Sbjct: 339 SQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHY 398
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
C+V LLGRAG+L A ++KNM E D+ W ++LG+C+L+G+ L ++ AE +
Sbjct: 399 GCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNI 458
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
N+G+YVLLSN+YA G + V+KVR M+++G+ K G S +E+ NKVH F GD H
Sbjct: 459 SNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHL 518
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ IY L ++ ++K G+V +T VLHD+ E EKE L+ HSE+LA+AYG++S G
Sbjct: 519 KSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPG 578
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P+++ KNLRVC DCH K ISKI GR I++RD NRFHHFS GSCSC D+W
Sbjct: 579 SPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 18/228 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ Y G + A++VFD+MP+R LVS MI+ Y + ++ AAR LF+ M +RD+V
Sbjct: 163 TGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIV 222
Query: 156 SWNTMLSGYAQNGYADAARRIFDRML-----EKNEISWNGLLAAYVQNGRIEEA----CM 206
SWN M+ GY+Q+G+ A +F ++L + +EI+ L+A Q G +E
Sbjct: 223 SWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVF 282
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ S+ V +L+ + K L +A +F+ P +D V+WN MITGYA + Y +A
Sbjct: 283 VNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDA 342
Query: 267 QRLFEE-------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
RLF+E P F T + G V+E IF++M ++
Sbjct: 343 LRLFDEMQGITGLQPTDITFIGTLQACAHA--GLVNEGIQIFESMGQE 388
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 144/296 (48%), Gaps = 22/296 (7%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ + + G SA VF+ MP RS VS AMI+ Y G ++ AR +FD+M +RD+VSWN
Sbjct: 166 VDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWN 225
Query: 128 VMISGYVRNKSLSAARNLFEMM-----PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
VMI GY ++ S A LF+ + PK D ++ LS +Q G + R I +
Sbjct: 226 VMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWI-HVFVN 284
Query: 183 KNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+ I N L+ Y + G +EEA ++F ++V+WN+++ G+ DA
Sbjct: 285 SSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALR 344
Query: 238 IFDRMP-----VRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVK-DVFTWTAMVSG 287
+FD M ++++ + A + E ++FE E +K + + +VS
Sbjct: 345 LFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSL 404
Query: 288 YVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
+ G++ A I M E ++V W++++ + +E+ E + +N+++
Sbjct: 405 LGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISN 460
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 167/413 (40%), Gaps = 88/413 (21%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK--- 151
+ A I+ +NG D A ++ Q+ + S +++ S + + + + K
Sbjct: 96 FTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKSGKLIHTHVLKFGL 155
Query: 152 -RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
D ++ YA+ G +A+++FDRM E++ +S ++ Y + G +E
Sbjct: 156 GLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA------- 208
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
A+ +FDRM RD VSWN MI GY+Q+ + ++A LF
Sbjct: 209 ------------------------ARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLF 244
Query: 271 EE-----APVKDVFTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVSWNAMIAGYVQ 321
++ P D T A +S Q G ++ R I + N A+I Y +
Sbjct: 245 QKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSK 304
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
++ A +F K++ +WN MITGYA
Sbjct: 305 CGSLEEAVLVFNDTPRKDIVAWNAMITGYA------------------------------ 334
Query: 382 AQSGYSEDSLRLFIEMKRY-GERLNRSPFTSVLSTCANLASLELGKQLHGQL-----VKV 435
GYS+D+LRLF EM+ G + F L CA+ + G Q+ + +K
Sbjct: 335 -MHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKP 393
Query: 436 GFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
E GC V + + G ++ AY + + ++ D + W++++ HG
Sbjct: 394 KIEHYGCLVS-----LLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHG 441
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 30 ANTNPYPSKKTLKRHLNSKSRNKPKPAGDW------------DIRQWNVAITTHMRNGCC 77
A+ P P + T+ L++ S+ G W +++ I + + G
Sbjct: 249 ADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSL 308
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-----QRDLVSWNVMISG 132
+ A+ VFN PR+ V++NAMI+GY ++G A ++FD+M Q +++ +
Sbjct: 309 EEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQA 368
Query: 133 YVRNKSLSAARNLFEMMP-----KRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEI 186
++ +FE M K + + ++S + G A I M +E + +
Sbjct: 369 CAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSV 428
Query: 187 SWNGLLAA 194
W+ +L +
Sbjct: 429 LWSSVLGS 436
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 351/572 (61%), Gaps = 13/572 (2%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+++ + + K L DA+ I + D N++I Y + + EA ++F++
Sbjct: 54 YHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR 113
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARE 330
KD+ +WT++++GY QN EA + M + N ++ +++ + +
Sbjct: 114 KKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQ 173
Query: 331 LFE-AMTC---KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ A+ C ++V + ++ YA+ G++ A +FD++ + +SW A+I+G+A+ G
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E +L +F EM+R G ++S+ S A + +LE GK +H +VK + FVGN
Sbjct: 234 GETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNT 293
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+L MY K GS+ +A FE +++KD+++WN+M+ +A++G GK+A+ FE M+ GI +
Sbjct: 294 MLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT + IL+ACSH GLV++G YF M ++Y + P +HY +VDLLGRAG L+ A +
Sbjct: 354 QITFLCILTACSHGGLVKEGKHYF-DMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFI 412
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
MP EP AA WGALL ACR++ ++ + AA+ +F+++P+++G VLL N+YA++G W
Sbjct: 413 FKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWD 472
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
++VR M+ GVKK SW+E+ N VH F D HP + IY +E+ K++++G
Sbjct: 473 AAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEG 532
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V VL V E+E+E L+YHSEK+A+A+ ++ +PAG IR+MKN+R+C DCH+A K
Sbjct: 533 YVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFK 592
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ISK+ R I++RD NRFHHFS GSCSCGDYW
Sbjct: 593 YISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 150/341 (43%), Gaps = 56/341 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK---- 151
N++I Y G + A +VFD+M ++D+VSW +I+GY +N + A L M K
Sbjct: 90 NSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFK 149
Query: 152 -----------------------------------RDVVSWNTMLSGYAQNGYADAARRI 176
DV + +L YA+ G D A +
Sbjct: 150 PNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAV 209
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE--SKANWEVV--SWNSLMGGFVKQKRL 232
FD++ KN +SWN L++ + + G E A M+F + +E +++S+ G L
Sbjct: 210 FDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGAL 269
Query: 233 GDAKWIFDRM-PVRDEVS---WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
KW+ M R +++ NTM+ YA++ + +A+++FE KD+ TW +M++ +
Sbjct: 270 EQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAF 329
Query: 289 VQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----V 340
Q G EA F+ M + N +++ ++ + + F+ + N +
Sbjct: 330 AQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEI 389
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAG 380
+ T++ ++G + +A +MP + W A++A
Sbjct: 390 EHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 10/162 (6%)
Query: 58 DW--DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
DW D+ + + + R G D A VF+ + ++ VS+NA+ISG+ G + A VF
Sbjct: 182 DWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVF 241
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAAR----NLFEMMPKRDVVSWNTMLSGYAQN 167
+M + +++ + SG +L + ++ + K NTML YA++
Sbjct: 242 AEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKS 301
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
G AR++F+R+L K+ ++WN +L A+ Q G +EA FE
Sbjct: 302 GSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFE 343
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVFDQM- 118
WN I+ R G ++AL VF M R + +Y+++ SG G L+ + V M
Sbjct: 221 WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMV 280
Query: 119 -PQRDLVSW--NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
++ L ++ N M+ Y ++ S+ AR +FE + +D+V+WN+ML+ +AQ G A
Sbjct: 281 KSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVS 340
Query: 176 IFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFE 209
F+ M + N+I++ +L A G ++E F+
Sbjct: 341 HFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD 378
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/654 (34%), Positives = 373/654 (57%), Gaps = 34/654 (5%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
D++ N ++ Y + D A +FDRMLE+N +SW L+ Y+Q G + + L +
Sbjct: 38 DLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALL-CEM 96
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDR------MPVRDEVSW-----NTMITGYAQNN 261
+ V N F + A + + M V+ W N I Y++
Sbjct: 97 GYSGVKPNEFT--FSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCG 154
Query: 262 YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWN-- 313
+ A+++F + P +++ +W AM++G+ G ++ ++F M P++ T +
Sbjct: 155 RIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLK 214
Query: 314 -----AMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
I G Q + R ++ +N+ + + ++ YA+ G + A+ +FDR+ Q
Sbjct: 215 ACGALGAIRGGTQIHASLITRGF--PISIRNIIA-SAIVDLYAKCGYLFEAQKVFDRIEQ 271
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ ISW+A+I G+AQ G +++ LF +++ ++ + ++ A+LA +E GKQ+
Sbjct: 272 KNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQM 331
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H ++KV V N+++ MY KCG EEA F E+ ++V+SW MI GY +HG G
Sbjct: 332 HCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLG 391
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
+ A+ LF M+ GI+ D++ + +LSACSH+GL+ + EYF + ++ + PN +HY C
Sbjct: 392 EKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYAC 451
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVD+LGRAG+L EA+NL++NM +P+ W LL ACR++G E+ + E++F M+ +N
Sbjct: 452 MVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDN 511
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
YV++SN+YA +G W + +VR ++ +G+KK G SW+E+ ++H F GD HP
Sbjct: 512 PVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLT 571
Query: 669 DRIYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI---P 724
++I+ L+E+E ++K++ G+ Y + LHDV EE KE LR HSEKLA+ ++
Sbjct: 572 EKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEK 631
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G IRV KNLRVC DCH IK +SKI+ ++ ++RD NRFH F G CSCGDYW
Sbjct: 632 KGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 157/333 (47%), Gaps = 58/333 (17%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
SV NA I Y G++ A QVF++MP R+LVSWN MI+G+ + + LF+ M
Sbjct: 140 SVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQG 199
Query: 152 R----DVVSWNTMLSG-------------------------------------YAQNGYA 170
+ D ++ + L YA+ GY
Sbjct: 200 QGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYL 259
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGF 226
A+++FDR+ +KN ISW+ L+ + Q G + EA LF ES +N + + +MG F
Sbjct: 260 FEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVF 319
Query: 227 VKQKRLGDAKWI---FDRMPVRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ K + ++P ++S N++I Y + EA+RLF E V++V +WT
Sbjct: 320 ADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWT 379
Query: 283 AMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
M++GY ++G ++A +F+ M E + V++ A+++ + + ++E F +
Sbjct: 380 VMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNN 439
Query: 339 -----NVASWNTMITGYAQSGEITHARNLFDRM 366
N+ + M+ ++G++ A+NL + M
Sbjct: 440 HQMKPNIEHYACMVDILGRAGQLKEAKNLIENM 472
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
R +L C+ + G Q+H V +GF + N L+ MY KC V+ A F+
Sbjct: 4 RQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFD 63
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+++++V+SW ++ GY + G K +L L M G+KP++ T L AC G+VE
Sbjct: 64 RMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVEN 123
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + + M G S +D+ + GR+ A+ + MPF + +W A++
Sbjct: 124 GMQ-IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWNAMIAG 180
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 257/738 (34%), Positives = 389/738 (52%), Gaps = 63/738 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
NAM+S + G++ A +VF +MP+RD+ SWNVM+ GY + L A +L+ M +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 152 RDVVSW-----------------------------------NTMLSGYAQNGYADAARRI 176
DV ++ N +++ YA+ G AAR++
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLF------ESKANWEVVSWNSLMGGFVKQK 230
FD M + ISWN ++A + +N E LF E + N ++ ++ G + +
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE- 313
Query: 231 RLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
+G AK + R D N++I Y + +A ++F KD +WTAM+S
Sbjct: 314 -VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 287 GYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKN--- 339
GY +NG D+A ++ M N V+ + +A R+D+ +L E K
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432
Query: 340 -VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
V N ++ YA+S I A +F M + D +SW+++IAG+ + S ++L F M
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ + N F + LS CA +L GK++H +++ G + +V NALL +Y KCG
Sbjct: 493 GH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A+ F +KDV+SWN M++G+ HG G AL LF M +G PD++T V +L ACS
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
G+V +G E F+ M + ++PN KHY CMVDLL R G+L EA NL+ MP +PDAA W
Sbjct: 612 RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVW 671
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
GALL CR++ EL E AA+VI E+EP + +VLL +LY +G+W V++VR MR++
Sbjct: 672 GALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
G+++ G SW+EV+ H F D HP+ I L + ++K GF L +V
Sbjct: 732 GLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEV 791
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
E++ +L HSE+LAVA+G+++ G I V KN C+ CH K IS+IV R I +
Sbjct: 792 SEDD---ILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITV 848
Query: 759 RDNNRFHHFSGGSCSCGD 776
RD + H F G CSCGD
Sbjct: 849 RDTKQLHCFKDGDCSCGD 866
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 169/365 (46%), Gaps = 33/365 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
D WN I H N C++ L +F +M P +++ + SG L ++ A++
Sbjct: 262 DCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML--SEVGFAKE 319
Query: 114 VFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ +R D+ N +I Y + A +F M +D +SW M+SGY +NG+
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN----WEVVSWNS 221
D A ++ M + ++++ LAA GR++ L E N VV N+
Sbjct: 380 PDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA 439
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--APVK-DV 278
L+ + K K + A +F M +D VSW++MI G+ N+ EA F VK +
Sbjct: 440 LLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNS 499
Query: 279 FTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
T+ A +S G +++GK A ++ + + V NA++ YV+ + A F
Sbjct: 500 VTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-NALLDLYVKCGQTSYAWAQFS 558
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ----HDCISWAAIIAGYAQSGYSED 389
+ K+V SWN M++G+ G A +LF++M + D +++ A++ +++G
Sbjct: 559 VHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQ 618
Query: 390 SLRLF 394
LF
Sbjct: 619 GWELF 623
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
G +GNA+L M + G + A+ F ++ ++DV SWN M+ GY + GF ++AL L+ M
Sbjct: 130 GLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
G++PD T +L C G E + R +G +V + + G +
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDI 248
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-EPENAGMYVLLSNL 618
A+ + M D +W A++ + + E E+ M E E + ++++
Sbjct: 249 VAARKVFDGMAVT-DCISWNAMIAG---HFENHECEAGLELFLTMLENEVQPNLMTITSV 304
Query: 619 YAASGRWGDVSKVRLKMRDRGVKK 642
ASG +V + +M VK+
Sbjct: 305 TVASGMLSEVGFAK-EMHGFAVKR 327
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN+ ++ + +G D AL +FN M V++ A++ G + ++F
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELF 623
Query: 116 DQMPQR-----DLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQNGY 169
M ++ +L + M+ R L+ A NL MP K D W +L+G + +
Sbjct: 624 HMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRH 683
Query: 170 AD----AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
+ AA+ I + LE N+++++ LL C L+ W V+
Sbjct: 684 VELGELAAKVILE--LEPNDVAYHVLL------------CDLYTDAGKWAQVA 722
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/610 (38%), Positives = 368/610 (60%), Gaps = 42/610 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I Y LD AR++FD+MPQR+ +WN +IS ++ L A LF MP+ D
Sbjct: 54 NRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQC 113
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQ----NGRIEEACML 207
SWN+M+SG+AQ+ + + F +M + NE S+ L+A N + ++
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S+ + +V ++L+ + K + A+ +F M R+ V+WN++IT Y QN +EA
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 268 RLF----EEAPVKDVFTWTAMVSG-----YVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
+F + D T ++VS ++ G AR++ + V NA++
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDM 293
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + +++ AR +F+ M+ +NV S +M++GYA++ + AR +F +M Q + +SW A+I
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALI 353
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
AGY Q+G +E++LRLF +KR E + + +T G L+K
Sbjct: 354 AGYTQNGENEEALRLFRLLKR--ESIWPTHYT------------------FGNLLK---- 389
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+ FVGN+L+ MY KCGS+E+ FE++ ++D +SWN +I GYA++G+G +AL +F M
Sbjct: 390 SDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKM 449
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G KPD +TM+G+L ACSH GLVE+G YF+SM ++G+IP HYTCMVDLLGRAG
Sbjct: 450 LVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGC 508
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L+EA+NL++ MP PDA WG+LL AC+++G E+ + AAE + E++P N+G YVLLSN+
Sbjct: 509 LNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNM 568
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
YA GRWGDV +VR MR +GV K G SW+EV+++VH F V D HP + +IY+ L+ L
Sbjct: 569 YAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKML 628
Query: 679 EFKLKQDGFV 688
++K+ G++
Sbjct: 629 TEQMKRVGYI 638
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 232/494 (46%), Gaps = 80/494 (16%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + C D A +F+ MP+R++ ++N++IS +G LD A ++F MP+ D
Sbjct: 54 NRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQC 113
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSG----------------- 163
SWN M+SG+ ++ + F M + D + S+ + LS
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173
Query: 164 ------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
Y++ G A +F M+E+N ++WN L+ Y QNG EA
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEAL 233
Query: 206 MLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDE-VSWNTMITG 256
+F +S + V+ S++ L + I R+ RD+ V N ++
Sbjct: 234 EVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDM 293
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ + + EA+R+F+ +++V + T+MVSGY + V AR +F M ++N VSWNA+I
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALI 353
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASW-----------------NTMITGYAQSGEITHA 359
AGY Q + A LF + K + W N++I Y + G I
Sbjct: 354 AGYTQNGENEEALRLFRLL--KRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDG 411
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
+F++M + DC+SW AII GYAQ+GY ++L++F +M GE+ + VL C++
Sbjct: 412 SRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA 471
Query: 420 ASLELGKQL------HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDV 472
+E G+ HG L+ + C V + + G + EA + E + V+ D
Sbjct: 472 GLVEEGRHYFFSMEEHG-LIPLKDHYTCMVD-----LLGRAGCLNEAKNLIEAMPVNPDA 525
Query: 473 ISWNTMIAGYARHG 486
+ W +++A HG
Sbjct: 526 VVWGSLLAACKVHG 539
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 199/398 (50%), Gaps = 30/398 (7%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ ++ + E+ N L+ + K L DA+ +FDRMP R+ +WN++I+ ++ +L EA
Sbjct: 41 ILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEA 100
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQT 322
RLF P D +W +MVSG+ Q+ + +E+ F M + N S+ + ++
Sbjct: 101 ARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGL 160
Query: 323 KRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
++M ++ ++ +V + +I Y++ G + A +F M + + ++W ++I
Sbjct: 161 MDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLI 220
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-F 437
Y Q+G + ++L +F+ M G + SV+S CA+L +L+ G Q+H ++VK F
Sbjct: 221 TCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKF 280
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+GNAL+ MY KC V EA F+ + ++V+S +M++GYAR K A +F
Sbjct: 281 RDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSK 340
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT---------- 547
M + ++ +++ + G E+ F + R+ + P HYT
Sbjct: 341 MTQRNV----VSWNALIAGYTQNGENEEALRLFRLLKRE-SIWPT--HYTFGNLLKSDIF 393
Query: 548 ---CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
++D+ + G +++ + + M E D +W A++
Sbjct: 394 VGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNAII 430
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 183/409 (44%), Gaps = 67/409 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ + I + + G A VF+ M R+ V++N++I+ Y NG A +VF +M
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 119 -----PQR----------------------------------DLVSWNVMISGYVRNKSL 139
P DLV N ++ Y + +
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
+ AR +F+ M R+VVS +M+SGYA+ AAR +F +M ++N +SWN L+A Y QNG
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360
Query: 200 RIEEACMLF---ESKANW------------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
EEA LF + ++ W ++ NSL+ ++K + D +F++M
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKE 420
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMI 300
RD VSWN +I GYAQN Y AEA ++F + V D T ++ G V+E R
Sbjct: 421 RDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHY 480
Query: 301 FDAMPEKNTVS----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGE 355
F +M E + + M+ + ++ A+ L EAM + W +++ G
Sbjct: 481 FFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGN 540
Query: 356 ITHARNLFDRMPQHD---CISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
I ++ +++ + D + + YA+ G D +R+ M++ G
Sbjct: 541 IEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQG 589
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 57/330 (17%)
Query: 38 KKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNA 97
K+ L+ H NK + D+ N + + + + A VF+ M R+ VS +
Sbjct: 265 KEGLQIHARVVKTNKFRD----DLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETS 320
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP------- 150
M+SGY + AR +F +M QR++VSWN +I+GY +N A LF ++
Sbjct: 321 MVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPT 380
Query: 151 --------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
K D+ N+++ Y + G + R+F++M E++ +SWN ++ Y QNG
Sbjct: 381 HYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGA 440
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
EA +F K G+ D V+ ++ +
Sbjct: 441 EALQIFR------------------KMLVCGEKP---------DHVTMIGVLCACSHAGL 473
Query: 263 LAEAQRLF---EE---APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAM 315
+ E + F EE P+KD +T MV + G ++EA+ + +AMP + V W ++
Sbjct: 474 VEEGRHYFFSMEEHGLIPLKD--HYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSL 531
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+A ++M + E + + WN+
Sbjct: 532 LAACKVHGNIEMGKHAAEKLL--EIDPWNS 559
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 15/242 (6%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N SPF +L +C S + +H +++ F F+ N L+ +Y KC +++A F
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + ++ +WN++I+ + GF +A LF SM +PD + ++S + E
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGFAQHDRFE 129
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD-----EAQNLMKNMPFEPDAATWG 579
+ EYF M+R+ ++ Y+ L AG +D + L+ + D
Sbjct: 130 ESLEYFVKMHREDFLL---NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGS 186
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
AL+ +Y K A EV M N + L Y +G + +V ++M D G
Sbjct: 187 ALID---MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG 243
Query: 640 VK 641
++
Sbjct: 244 LE 245
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/510 (42%), Positives = 329/510 (64%), Gaps = 23/510 (4%)
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSW---NAMIAGYVQTKRMD-----------MARELF 332
GYV+N V + +F AM ++ S A + + + R+ +A+ F
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229
Query: 333 EAMTCKNVASWNTMITGYAQSG--EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
E +N NTM+ YA+ G ++ AR +FD M + D +SW ++IA YAQ+G S ++
Sbjct: 230 E----RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEA 284
Query: 391 LRLFIEMKRYGE--RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ L+ +M G + N ++VL CA+ +++ GK++H Q+V++G E +VG +++
Sbjct: 285 IGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIV 344
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG VE A AF +I +K+++SW+ MI GY HG G++AL +F MK G++P+ I
Sbjct: 345 DMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYI 404
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + +L+ACSH GL+++G ++ +M +++G+ +HY CMVDLLGRAG LDEA +L+K
Sbjct: 405 TFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKE 464
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
M +PDAA WGALL ACR++ ELAE + + +FE++ N+G YVLLSN+YA + W DV
Sbjct: 465 MKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDV 524
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++RL ++ R ++K GYS E++ K++ F VGD HP+ IY+YLE+L ++++ G+V
Sbjct: 525 ERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYV 584
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
+T VLHD+ EEEKE LR HSEKLAVA+ +++ I ++KNLRVC DCH A+K I
Sbjct: 585 PNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFI 644
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KI R II+RD RFHHF G CSC DYW
Sbjct: 645 TKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 90 RSSVSYNAMISGYLLNGQ--LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE 147
R++ N M+ Y G L+ AR+VFD M +RD+VSWN MI+ Y +N + A L+
Sbjct: 231 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYS 289
Query: 148 MM------PKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ 197
M K + V+ + +L A G +RI +++ LE+N ++ Y +
Sbjct: 290 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSK 349
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTM 253
GR+E A F ++SW++++ G+ R +A IF M + +++ ++
Sbjct: 350 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 409
Query: 254 ITGYAQNNYLAEA--------QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ + L E Q EA V+ + MV + G +DEA + M
Sbjct: 410 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEH---YGCMVDLLGRAGCLDEAYSLIKEMK 466
Query: 306 EK-NTVSWNAMIAGYVQTKRMDMA----RELFE 333
K + W A+++ K +++A + LFE
Sbjct: 467 VKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 499
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 149/332 (44%), Gaps = 47/332 (14%)
Query: 132 GYVRNKSLSAARNLFEMMPKRD---VVSWNTMLSGYAQNGYADAARRIFDRML------- 181
GYVRN + + LF M D VV L ++ A+ R+ DR +
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFS------ASARVPDRGVTASLHAL 223
Query: 182 ------EKNEISWNGLLAAYVQNGR--IEEACMLFESKANWEVVSWNSLMGGFVKQKRLG 233
E+N N +L +Y + G +E A +F++ +VVSWNS++ + +
Sbjct: 224 IAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTMER-DVVSWNSMIALYAQNGMSA 282
Query: 234 DAKWIFDRM-----PVR-DEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTA 283
+A ++ +M ++ + V+ + ++ A + +R+ + ++V+ T+
Sbjct: 283 EAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTS 342
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----N 339
+V Y + G+V+ A F + EKN +SW+AMI GY R A E+F M N
Sbjct: 343 IVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPN 402
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLF 394
++ +++ + +G + R ++ M Q I + ++ ++G +++ L
Sbjct: 403 YITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLI 462
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
EMK + + + + ++LS C ++EL +
Sbjct: 463 KEMK---VKPDAAIWGALLSACRIHKNVELAE 491
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
D+ WN I + +NG A+ +++ M + ++V+ +A++ G + ++
Sbjct: 264 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKR 323
Query: 114 VFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ +Q+ + ++ ++ Y + + A F + +++++SW+ M++GY +G
Sbjct: 324 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 383
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVSWN 220
A IF M L N I++ +LAA G ++E M E V +
Sbjct: 384 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 443
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAE--AQRLFE 271
++ + L +A + M V+ D W +++ +N LAE +RLFE
Sbjct: 444 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 499
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 257/731 (35%), Positives = 386/731 (52%), Gaps = 84/731 (11%)
Query: 121 RDLVSWNVMISGYVRNK-SLSAARNLFEMMPKR-------DVVSWNTMLS---------- 162
R+ VSWN MI + N S + L EMM + DV + T+L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
G +G+A R L+K + N L+ Y + G I A M+F+ N VVSWN++
Sbjct: 61 GKGVHGWAVKLR------LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 114
Query: 223 MGGF------------VKQKRLG------DAKWIFDRMPV-------------------- 244
+GGF ++Q G D I + +PV
Sbjct: 115 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 174
Query: 245 ---RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
+E+ N + YA+ L+ AQR+F K V +W A++ G+ Q+ ++ R+
Sbjct: 175 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS---NDPRLSL 231
Query: 302 DA---------MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC----KNVASWNTMIT 348
DA +P+ TV ++++ + K + + +E+ + +++ + ++++
Sbjct: 232 DAHLQMKISGLLPDSFTVC--SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 289
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
Y GE+ + LFD M +SW +I GY Q+G+ + +L +F +M YG +L
Sbjct: 290 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 349
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
V C+ L SL LG++ H +K E F+ +L+ MY K GS+ ++ F +
Sbjct: 350 MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 409
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+K SWN MI GY HG K+A+ LFE M+ G PDD+T +G+L+AC+H+GL+ +G
Sbjct: 410 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR 469
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM-KNMPFEPDAATWGALLGACRL 587
Y M +G+ PN KHY C++D+LGRAG+LD+A ++ + M E D W +LL +CR+
Sbjct: 470 YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI 529
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+ E+ EK A +FE+EPE YVLLSNLYA G+W DV KVR +M + ++K G S
Sbjct: 530 HQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCS 589
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
W+E+ KV +F VG+ + I + LE K+ + G+ T V HD+ EEEK L
Sbjct: 590 WIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQL 649
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
R HSEKLA+ YG++ G IRV KNLR+C DCHNA K ISK++ R I++RDN RFHHF
Sbjct: 650 RGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHF 709
Query: 768 SGGSCSCGDYW 778
G CSCGDYW
Sbjct: 710 KNGVCSCGDYW 720
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 192/475 (40%), Gaps = 113/475 (23%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL----LNGQLDPARQ------- 113
N + + + GC +A +F ++ VS+N M+ G+ +G D RQ
Sbjct: 81 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 140
Query: 114 -------VFDQMP------------------------QRDLVSWNVMISGYVRNKSLSAA 142
+ + +P +LV+ N ++ Y + SLS A
Sbjct: 141 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA-NAFVASYAKCGSLSYA 199
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
+ +F + + V SWN ++ G+AQ ++ R D L ++ +GLL +
Sbjct: 200 QRVFHGIRSKTVNSWNALIGGHAQ---SNDPRLSLDAHL---QMKISGLLPDSFTVCSLL 253
Query: 203 EACMLFESK-----------ANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
AC +S NW ++ + S++ ++ L + +FD M + V
Sbjct: 254 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 313
Query: 249 SWNTMITGYAQNNYLAEAQRLFEE-------------APV-------------------- 275
SWNT+ITGY QN + A +F + PV
Sbjct: 314 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 373
Query: 276 ------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
D F +++ Y +NG + ++ +F+ + EK+T SWNAMI GY A
Sbjct: 374 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 433
Query: 330 ELFEAM--TCKNV--ASWNTMITGYAQSGEITHARNLFDRMP-----QHDCISWAAIIAG 380
+LFE M T N ++ ++T SG I D+M + + +A +I
Sbjct: 434 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 493
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
++G + +LR+ E E + + S+LS+C +LE+G+++ +L ++
Sbjct: 494 LGRAGQLDKALRVVAE--EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 546
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 135/310 (43%), Gaps = 40/310 (12%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN----KSLSAARNL 145
R Y +++S Y+ G+L + +FD M + LVSWN +I+GY++N ++L R +
Sbjct: 279 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 338
Query: 146 ---------FEMMPKRDVVSWNTMLS-GYAQNGYADAARRIFDRMLEKNEISWNGLLAAY 195
MMP S L G + YA +LE + L+ Y
Sbjct: 339 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA------LKHLLEDDAFIACSLIDMY 392
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWN 251
+NG I ++ +F SWN+++ G+ +A +F+ M D++++
Sbjct: 393 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 452
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV-------QNGKVDEA-RMIFDA 303
++T + + E R ++ +K F + Y + G++D+A R++ +
Sbjct: 453 GVLTACNHSGLIHEGLRYLDQ--MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEE 510
Query: 304 MPEKNTVS-WNAMIAGYVQTKRMDM----ARELFEAMTCKNVASWNTMITGYAQSGEITH 358
M E+ V W ++++ + ++M A +LFE + + ++ + YA G+
Sbjct: 511 MSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE-LEPEKPENYVLLSNLYAGLGKWED 569
Query: 359 ARNLFDRMPQ 368
R + RM +
Sbjct: 570 VRKVRQRMNE 579
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQ 113
D + WN IT +++NG D AL VF M + +S + L L R+
Sbjct: 309 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 368
Query: 114 ----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ + D +I Y +N S++ + +F + ++ SWN M+ GY +G
Sbjct: 369 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 428
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA 204
A A ++F+ M +++++ G+L A +G I E
Sbjct: 429 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 467
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/562 (40%), Positives = 331/562 (58%), Gaps = 40/562 (7%)
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
Y++ L A L+E K+ + +++GYV+ G + AR +FD MP++ +WNAMI
Sbjct: 4 YSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMI 63
Query: 317 AGYVQTKRMDMARELFEAM----------TCKNV---------ASWNTMITGYA------ 351
AG +Q + + LF M T +V S I GYA
Sbjct: 64 AGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLE 123
Query: 352 --------------QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
++G++ + MP + ++W +I G AQ+G E L L+ M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
K G R N+ F +VLS+C++LA G+Q+H + +K+G + V ++L+ MY KCG +
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCL 243
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSA 516
+A AF E D+D + W++MI+ Y HG G +A+ LF SM + ++ +++ + +L A
Sbjct: 244 GDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYA 303
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CSH+GL +KG E F M YG P KHYTC+VDLLGRAG LD+A+ ++K+MP +PD
Sbjct: 304 CSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPV 363
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W LL AC ++ E+A+K + I E++P ++ YVLL+N++A++ RW DVS+VR MR
Sbjct: 364 IWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 423
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
D+ VKK G SW E + +VH F +GD + IY+YL+EL ++K G+ T VLH
Sbjct: 424 DKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLH 483
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
D+ EEEKE L HSEKLAVA+ ++ +P G PIR++KNLRVC DCH A K+IS I+ R I
Sbjct: 484 DMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREI 543
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
LRD +RFHHF G CSCGDYW
Sbjct: 544 TLRDGSRFHHFINGKCSCGDYW 565
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 175/388 (45%), Gaps = 58/388 (14%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
++ + + G SA+ ++ M +++ +S N +I+GY+ G L AR+VFD+MP R L +WN
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60
Query: 128 VMISGYVR----NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI----FDR 179
MI+G ++ + LS R + + D + ++ SG A ++I
Sbjct: 61 AMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKY 120
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
LE + + + L Y++NG++++ ++ S +V+WN+L+ G + +++
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 240 DRMPVR----DEVSWNT-----------------------------------MITGYAQN 260
M + +++++ T +I+ Y++
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-----NTVSWNAM 315
L +A + F E +D W++M+S Y +G+ DEA +F++M E+ N V++ +
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNL 300
Query: 316 IAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP-QH 369
+ + D ELF+ M K + + ++ ++G + A + MP +
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKP 360
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEM 397
D + W +++ +E + ++F E+
Sbjct: 361 DPVIWKTLLSACNIHKNAEMAQKVFKEI 388
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 188/427 (44%), Gaps = 50/427 (11%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+S Y G L A ++++M +++ +S N++I+GYVR L +AR +F+ MP R + +WN
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60
Query: 159 TMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLL--AAYVQNGRIEEACMLFESKA 212
M++G Q Y + +F M +E + + +A +++ I + + K
Sbjct: 61 AMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKY 120
Query: 213 NWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN------YLA 264
E +V +SL +++ +L D + + MPVR+ V+WNT+I G AQN YL
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 265 EAQRLFEEAPVKDVF-TWTAMVSGYVQNGKVDEARM-IFDAMPEKNTVSWNAMIAGYVQT 322
+ ++ P K F T + S G+ + +++I+ Y +
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 323 KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+ A + F ++ W++MI+ Y G+ A LF+ M +
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQ------------- 287
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGC 441
EM+ +N F ++L C++ + G +L +V K GF+ G
Sbjct: 288 ------------TEME-----VNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
++ + + G +++A + + + D + W T+++ H + A +F+ +
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEI-- 388
Query: 501 VGIKPDD 507
+ I P+D
Sbjct: 389 LEIDPND 395
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISG---YLLNGQLDPARQVFD 116
WN I + +NGC ++ L+++ M R + +++ ++S + GQ +Q+
Sbjct: 160 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ---GQQIHA 216
Query: 117 QMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+ + + + +IS Y + L A F D V W++M+S Y +G D
Sbjct: 217 EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDE 276
Query: 173 ARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEACMLFE---SKANWE--VVSWNSL 222
A ++F+ M +E NE+++ LL A +G ++ LF+ K ++ + + +
Sbjct: 277 AIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 336
Query: 223 MGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ + L A+ I MP++ D V W T+++ + AQ++F+E
Sbjct: 337 VDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKE 387
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLL-----NGQLDPAR 112
D D W+ I+ + +G D A+ +FNSM ++ + N + LL +G D
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGL 314
Query: 113 QVFDQMPQR-----DLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQ 166
++FD M ++ L + ++ R L A + + MP K D V W T+LS
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNI 374
Query: 167 NGYADAARRIFDRMLE 182
+ A+ A+++F +LE
Sbjct: 375 HKNAEMAQKVFKEILE 390
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/631 (36%), Positives = 357/631 (56%), Gaps = 42/631 (6%)
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
++ YA G AR +FD + E+N I +N ++ +Y+ N ++A ++F ++VS
Sbjct: 73 LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFR-----DMVS- 126
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL----FEEAPV 275
GGF D ++ ++ + ++ L +L F+
Sbjct: 127 ----GGFSP-----------------DHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLD 165
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
++F +++ Y + G + EAR + D M K+ VSWN+M+AGY Q + D A ++ M
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM 225
Query: 336 --------TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
C +AS +T S + + +F + + +SW +I+ Y ++
Sbjct: 226 DGVRQKPDAC-TMASLLPAVTN-TSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMP 283
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
S+ L+++M + + SVL C +L++L LG+++H + + + N+L
Sbjct: 284 GKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSL 343
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY +CG +E+A F+ + +DV SW ++I+ Y G G +A+ LF M+ G PD
Sbjct: 344 IDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDS 403
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
I V ILSACSH+GL+ +G YF M DY + P +H+ C+VDLLGR+GR+DEA N++K
Sbjct: 404 IAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIK 463
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGD 627
MP +P+ WGALL +CR+Y ++ AA+ + ++ PE +G YVLLSN+YA +GRW +
Sbjct: 464 QMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTE 523
Query: 628 VSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGF 687
V+ +R M+ R ++K+ G S +E+ N+VHTF GDT HP+ IY L L K+K+ G+
Sbjct: 524 VTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGY 583
Query: 688 VYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
V T LHDV EE+KE L HSEKLA+ + IL+ PIR+ KNLRVC DCH A K
Sbjct: 584 VPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQES-PIRITKNLRVCGDCHIAAKL 642
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKIV R I++RD NRFHHF G CSCGDYW
Sbjct: 643 ISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 187/404 (46%), Gaps = 45/404 (11%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
++ Y G+ AR VFD +P+R+++ +NVMI Y+ N A +F RD+VS
Sbjct: 73 LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVF-----RDMVS- 126
Query: 158 NTMLSGYAQNGY-----------ADAAR-------RIFDRMLEKNEISWNGLLAAYVQNG 199
G++ + Y +D R +F L+ N NGL+A Y + G
Sbjct: 127 ----GGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCG 182
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTM----- 253
+ EA + + + +VVSWNS++ G+ + + DA I M VR + TM
Sbjct: 183 CLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLP 242
Query: 254 -ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN---GK-VDEARMIFDAMPEKN 308
+T + N L + +F K + +W M+S Y++N GK VD + E +
Sbjct: 243 AVTNTSSENVLY-VEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPD 301
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGYAQSGEITHARNLFD 364
++ +++ + + R + E + C N+ N++I YA+ G + A+ +FD
Sbjct: 302 AITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFD 361
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
RM D SW ++I+ Y +G +++ LF EM+ G+ + F ++LS C++ L
Sbjct: 362 RMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNE 421
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLV-MYCKCGSVEEAYHAFEEI 467
GK Q+ A LV + + G V+EAY+ +++
Sbjct: 422 GKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQM 465
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 158/351 (45%), Gaps = 40/351 (11%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN--- 136
A +VF+ +P R+ + YN MI Y+ N D A VF RD+VS Y
Sbjct: 86 ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVF-----RDMVSGGFSPDHYTYPCVL 140
Query: 137 KSLSAARNL----------FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
K+ S + NL F++ ++ N +++ Y + G AR + D M K+ +
Sbjct: 141 KACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVV 200
Query: 187 SWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGF--VKQKRLGDAKWIFD 240
SWN ++A Y QN + ++A + + + + SL+ + + + +F
Sbjct: 201 SWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFM 260
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLF------EEAPVKDVFTWTAMVSGYVQNGKV 294
+ + VSWN MI+ Y +N+ ++ L+ E P D T +++ +
Sbjct: 261 NLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEP--DAITCASVLRACGDLSAL 318
Query: 295 DEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
R I + + K N + N++I Y + ++ A+ +F+ M ++VASW ++I+ Y
Sbjct: 319 LLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAY 378
Query: 351 AQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+G+ +A LF M D I++ AI++ + SG + F +M
Sbjct: 379 GMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQM 429
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 39/440 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ N I + + GC A V + M + VS+N+M++GY N Q D A + +
Sbjct: 165 DLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICRE 224
Query: 118 M----PQRDLVSWNVMISGYVRNKSLSA--ARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
M + D + ++ S + +F + K+ +VSWN M+S Y +N
Sbjct: 225 MDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPG 284
Query: 172 AARRIFDRM----LEKNEISWN------GLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
+ ++ +M +E + I+ G L+A + RI E + K ++ NS
Sbjct: 285 KSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHE--YVERKKLCPNMLLENS 342
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKD 277
L+ + + L DAK +FDRM RD SW ++I+ Y A LF E D
Sbjct: 343 LIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPD 402
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
+ A++S +G ++E + F M + ++ + ++ ++ R+D A +
Sbjct: 403 SIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNII 462
Query: 333 EAMTCK-NVASWNTMITG---YAQSG-EITHARNLFDRMPQHDCISWAAIIAG-YAQSGY 386
+ M K N W +++ Y+ I A L P+ + +++ YA++G
Sbjct: 463 KQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEES--GYYVLLSNIYAKAGR 520
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+ + MKR R+ + P S + + + G H Q ++ E VG
Sbjct: 521 WTEVTAIRSLMKR--RRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKM 578
Query: 447 LLVMYCKCGSVEEAYHAFEE 466
+ Y + A H EE
Sbjct: 579 KELGYVP--KTDSALHDVEE 596
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 181/408 (44%), Gaps = 38/408 (9%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQ----VF 115
+NV I ++M N D AL VF M +Y ++ + L Q VF
Sbjct: 101 YNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVF 160
Query: 116 DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+L N +I+ Y + L AR + + M +DVVSWN+M++GYAQN D A
Sbjct: 161 KVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALD 220
Query: 176 I---FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE---VVSWNSLMGGFVKQ 229
I D + +K + L V N E + E N E +VSWN ++ ++K
Sbjct: 221 ICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKN 280
Query: 230 KRLGDAKWIFDRM------PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVF 279
G + ++ +M P D ++ +++ + L +R+ E K ++
Sbjct: 281 SMPGKSVDLYLQMGKCEVEP--DAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNML 338
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---- 335
+++ Y + G +++A+ +FD M ++ SW ++I+ Y T + A LF M
Sbjct: 339 LENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSG 398
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDS 390
+ ++ +++ + SG + + F +M I+ +A ++ +SG +++
Sbjct: 399 QSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEA 458
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+ +M + N + ++LS+C +++++G +L+++ E
Sbjct: 459 YNIIKQMPM---KPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPE 503
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 24/252 (9%)
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
H A+++ +S S + L +E+ G+ L++ P L K +
Sbjct: 9 HQFPKLQALVSSIRKSLVSPQNPVLVLEL--LGKVLDQYPDIKTL------------KNV 54
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H ++ + F +G L+ Y G A + F+ I +++VI +N MI Y +
Sbjct: 55 HSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLY 114
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
DAL++F M + G PD T +L ACS + + G + ++ + G+ N
Sbjct: 115 DDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFK-VGLDLNLFVGNG 173
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME--- 605
++ L G+ G L EA+ ++ M D +W +++ Y + + A ++ EM+
Sbjct: 174 LIALYGKCGCLPEARCVLDEMQ-SKDVVSWNSMVAG---YAQNMQFDDALDICREMDGVR 229
Query: 606 --PENAGMYVLL 615
P+ M LL
Sbjct: 230 QKPDACTMASLL 241
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/592 (37%), Positives = 335/592 (56%), Gaps = 39/592 (6%)
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
AY +G+I + LF + ++ + + + L D ++ + E++ N
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSEINPNEF 131
Query: 254 ITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ ++ +L +K D + T +V Y + G V A+ +FD MPE++
Sbjct: 132 TFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
VS A MIT YA+ G + AR LFD M +
Sbjct: 192 LVSSTA-------------------------------MITCYAKQGNVEAARALFDSMCE 220
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQ 427
D +SW +I GYAQ G+ D+L LF ++ G+ + + + LS C+ + +LE G+
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
+H + V L+ MY KCGS+EEA F + KD+++WN MIAGYA HG+
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 488 GKDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+DAL LF M+ + G++P DIT +G L AC+H GLV +G F SM ++YG+ P +HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
C+V LLGRAG+L A +KNM + D+ W ++LG+C+L+G L ++ AE + +
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+N+G+YVLLSN+YA+ G + V+KVR M+++G+ K G S +E++NKVH F GD H
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ IY L ++ ++K G+V +T VL D+ E EKE L+ HSE+LA+AYG++S G
Sbjct: 521 KSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPG 580
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P+++ KNLRVC DCH K ISKI GR I++RD NRFHHF+ GSCSCGD+W
Sbjct: 581 SPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 18/228 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ Y G + A++VFD+MP+R LVS MI+ Y + ++ AAR LF+ M +RD+V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 156 SWNTMLSGYAQNGYADAARRIFDRML-----EKNEISWNGLLAAYVQNGRIEEA----CM 206
SWN M+ GYAQ+G+ + A +F ++L + +EI+ L+A Q G +E
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ S+ V L+ + K L +A +F+ P +D V+WN MI GYA + Y +A
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 267 QRLFEE-------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
RLF E P F T + G V+E IF++M ++
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHA--GLVNEGIRIFESMGQE 390
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 151/323 (46%), Gaps = 28/323 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ + + G SA VF+ MP RS VS AMI+ Y G ++ AR +FD M +RD+VSWN
Sbjct: 168 VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWN 227
Query: 128 VMISGYVRNKSLSAARNLFEMM-----PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
VMI GY ++ + A LF+ + PK D ++ LS +Q G + R I ++
Sbjct: 228 VMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI-HVFVK 286
Query: 183 KNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+ I N GL+ Y + G +EEA ++F ++V+WN+++ G+ DA
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 238 IFDRMP-----VRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVK-DVFTWTAMVSG 287
+F+ M ++++ + A + E R+FE E +K + + +VS
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 288 YVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFE---AMTCKNVASW 343
+ G++ A M + ++V W++++ + +E+ E + KN +
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
Query: 344 NTMITGYAQSGE---ITHARNLF 363
+ YA G+ + RNL
Sbjct: 467 VLLSNIYASVGDYEGVAKVRNLM 489
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 163/413 (39%), Gaps = 88/413 (21%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-- 152
+ A I+ +NG D A ++ Q+ ++ S +++ S + + + + K
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGL 157
Query: 153 --DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
D ++ YA+ G +A+++FDRM E++ +S ++ Y + G +E
Sbjct: 158 GIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA------- 210
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
A+ +FD M RD VSWN MI GYAQ+ + +A LF
Sbjct: 211 ------------------------ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 271 -----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
E P D T A +S Q G ++ R I + N +I Y +
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
++ A +F K++ +WN MI GY
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGY------------------------------- 335
Query: 382 AQSGYSEDSLRLFIEMKRY-GERLNRSPFTSVLSTCANLASLELGKQLHGQL-----VKV 435
A GYS+D+LRLF EM+ G + F L CA+ + G ++ + +K
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 436 GFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
E GC V + + G ++ AY + + +D D + W++++ HG
Sbjct: 396 KIEHYGCLVS-----LLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/546 (40%), Positives = 327/546 (59%), Gaps = 32/546 (5%)
Query: 253 MITGYAQNNYLAEAQRLFEE--APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+I+ Y + + + A+++FEE K + A+VSGYV N K EA ++F M E+
Sbjct: 90 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVP 149
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCK--------NVASWNTMITGYAQSGEITHARNL 362
+ + G + + EL ++ C +V+ N IT Y + G + +A+ L
Sbjct: 150 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 209
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD MP ISW A+++GYAQ+G + + L L+ M G + VLS+CANL +
Sbjct: 210 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 269
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+G ++ ++ GF + F+ NAL+ MY +CG++ +A F+ + ++ ++SW +I GY
Sbjct: 270 SVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 329
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
HG G+ A+ LF+ M GI+PD V +LSACSH GL ++G EYF M R+Y + P
Sbjct: 330 GMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPG 389
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY+CMVDLLGRAGRL EAQ L+++MP +PD A WGALLGAC+++ ELAE A E +
Sbjct: 390 PEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI 449
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+EPEN G YVLLSN+Y+ + V ++R+ M+++ +KK G S++E++ +VH F VGD
Sbjct: 450 ELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGD 509
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH----------MLRYHSE 712
H + D IY LEELE +++ + G+ EK++ + HSE
Sbjct: 510 RNHLQSDEIYRVLEELE------------AIIMQEFGKPEKDNREESNKDGFTRVGVHSE 557
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLAVA+G+L+ G + ++KNLR+CEDCH K +SKIV R + +RD RFHHF GSC
Sbjct: 558 KLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSC 617
Query: 773 SCGDYW 778
SC DYW
Sbjct: 618 SCKDYW 623
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 7/219 (3%)
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+L L+ +M R+G+R N F L +CA L+ LG Q HGQ+ KVG FV L+
Sbjct: 32 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91
Query: 449 VMYCKCGSVEEAYHAFEEIVD--KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
MYCK V+ A FEE K + +N +++GY + +A++LF M G+ +
Sbjct: 92 SMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVN 151
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T++G++ AC +E G+ S + YG + C + + + G ++ AQ L
Sbjct: 152 SVTLLGLIPACVSPINLELGSSLHCSTLK-YGFDSDVSVVNCFITMYMKCGSVNYAQKLF 210
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
MP + +W A++ Y + LA E+ M+
Sbjct: 211 DEMPVK-GLISWNAMVSG---YAQNGLATNVLELYRNMD 245
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 178/426 (41%), Gaps = 64/426 (15%)
Query: 68 ITTHMRNGCCDSALHVF--NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR---- 121
I+ + + D+A VF N R+ +V YNA++SGY+ N + A +F QM +
Sbjct: 91 ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPV 150
Query: 122 -----------------------------------DLVSWNVMISGYVRNKSLSAARNLF 146
D+ N I+ Y++ S++ A+ LF
Sbjct: 151 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 210
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI- 201
+ MP + ++SWN M+SGYAQNG A ++ M + + ++ G+L++ G
Sbjct: 211 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 270
Query: 202 ---EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
E + S N+L+ + + L A+ +FD MP R VSW +I GY
Sbjct: 271 VGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG 330
Query: 259 QNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNT 309
+ + A +LF+E D + ++S G D+ F M E
Sbjct: 331 MHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGP 390
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMP- 367
++ M+ + R+ A+ L E+M K + A W ++ + A F+R+
Sbjct: 391 EHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE 450
Query: 368 -QHDCISWAAIIAG-YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
+ + I + +++ Y+ + S+ LR+ I MK ++L + P S + + +G
Sbjct: 451 LEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKE--KKLKKDPGCSYVELKGRVHPFIVG 508
Query: 426 KQLHGQ 431
+ H Q
Sbjct: 509 DRNHLQ 514
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 49/263 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N IT +M+ G + A +F+ MP + +S+NAM+SGY NG +++
Sbjct: 184 DSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRN 243
Query: 118 MPQR----DLVSW-----------------------------------NVMISGYVRNKS 138
M D V+ N +I+ Y R +
Sbjct: 244 MDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGN 303
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L+ A+ +F+ MP+R +VSW ++ GY +G+ + A ++F M +E + ++ +L+A
Sbjct: 304 LTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSA 363
Query: 195 YVQNGRIEEACMLFE-SKANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G ++ F+ K N+++ ++ ++ + RL +A+ + + MP++ D
Sbjct: 364 CSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGA 423
Query: 249 SWNTMITGYAQNNYLAEAQRLFE 271
W ++ + + A+ FE
Sbjct: 424 VWGALLGACKIHKNVELAELAFE 446
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 329/576 (57%), Gaps = 27/576 (4%)
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN------YLAEAQRLFEEAPVKDVFTWTA 283
+ +G A +FD++P R+ +WNT+I A+ L Q L E + FT+ +
Sbjct: 63 RDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPS 122
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG----YVQTKRMDMARELF------- 332
++ ++ E + + + + V ++ YV M+ A LF
Sbjct: 123 VLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGV 182
Query: 333 ---------EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
E NV N M+ GYA+ G + AR LFDRM Q +SW +I+GYAQ
Sbjct: 183 DDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQ 242
Query: 384 SGYSEDSLRLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
+G+ ++++ +F M + G+ L NR SVL + L LELGK +H K
Sbjct: 243 NGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDV 302
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+G+AL+ MY KCGS+E+A FE + +VI+WN +I G A HG D M+ G
Sbjct: 303 LGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCG 362
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
I P D+T + ILSACSH GLV++G +F M G+ P +HY CMVDLLGRAG L+EA
Sbjct: 363 ISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEA 422
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ L+ NMP +PD W ALLGA +++ ++ +AAEV+ +M P ++G YV LSN+YA+S
Sbjct: 423 EELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASS 482
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
G W V+ VRL M+D ++K G SW+E+ +H F V D H I++ LEE+ KL
Sbjct: 483 GNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKL 542
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
+G + T VL + E+ KE +L YHSEK+AVA+G++S P P+ ++KNLR+CEDCH
Sbjct: 543 SLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCH 602
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+++K ISK+ R I++RD RFHHF GSCSC DYW
Sbjct: 603 SSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 42/296 (14%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
++V NVM+ GY R +L AAR LF+ M +R VVSWN M+SGYAQNG+ A IF RM+
Sbjct: 198 NVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMM 257
Query: 182 E-----KNEISWNGLLAAYVQNGRIEEA--CMLFESKANWEV--VSWNSLMGGFVKQKRL 232
+ N ++ +L A + G +E L+ K + V ++L+ + K +
Sbjct: 258 QMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSI 317
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQN-------NYLAEAQRLFEEAPVKDVFTWTAMV 285
A +F+R+P + ++WN +I G A + NYL+ ++ DV T+ A++
Sbjct: 318 EKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKC--GISPSDV-TYIAIL 374
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMI------------AGYVQTKRMDMARELFE 333
S G VDE R F+ M N+V I AGY++ A EL
Sbjct: 375 SACSHAGLVDEGRSFFNDMV--NSVGLKPKIEHYGCMVDLLGRAGYLEE-----AEELIL 427
Query: 334 AMTCK-NVASWNTMITGYAQSGEI---THARNLFDRMPQHDCISWAAIIAGYAQSG 385
M K + W ++ I A + +M HD ++ A+ YA SG
Sbjct: 428 NMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSG 483
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 45/329 (13%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGY--VRNKSLSAARNLFEMMPKRDV----VSWNTMLSGY 164
A VFDQ+P+R+ +WN +I +++ L A +M+ + V ++ ++L
Sbjct: 68 ALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKAC 127
Query: 165 AQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLF------------ 208
A +++ +L+ +E LL YV G +E+A +LF
Sbjct: 128 AVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRN 187
Query: 209 ----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
E + VV N ++ G+ + L A+ +FDRM R VSWN MI+GYAQN +
Sbjct: 188 LVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYK 247
Query: 265 EAQRLFEE-APVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----A 314
EA +F + DV T +++ + G ++ + + EKN + + A
Sbjct: 248 EAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVH-LYAEKNKIRIDDVLGSA 306
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC--- 371
++ Y + ++ A ++FE + NV +WN +I G A G+ N RM + C
Sbjct: 307 LVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEK--CGIS 364
Query: 372 ---ISWAAIIAGYAQSGYSEDSLRLFIEM 397
+++ AI++ + +G ++ F +M
Sbjct: 365 PSDVTYIAILSACSHAGLVDEGRSFFNDM 393
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE-MMPKRDV 154
N M+ GY G L AR++FD+M QR +VSWNVMISGY +N A +F MM DV
Sbjct: 203 NVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDV 262
Query: 155 ----VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA-----YVQNGRIEEAC 205
V+ ++L ++ G + + + EKN+I + +L + Y + G IE+A
Sbjct: 263 LPNRVTLVSVLPAISRLGVLELGKWVH-LYAEKNKIRIDDVLGSALVDMYAKCGSIEKAI 321
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNN 261
+FE V++WN+++GG + D RM +V++ +++ +
Sbjct: 322 QVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAG 381
Query: 262 YLAEAQRLFEE-----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAM 315
+ E + F + + + MV + G ++EA + MP K + V W A+
Sbjct: 382 LVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKAL 441
Query: 316 IAGYVQTKRMDM---ARELFEAMTCKNVASWNTMITGYAQSG 354
+ K + + A E+ M + ++ + YA SG
Sbjct: 442 LGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSG 483
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 154/377 (40%), Gaps = 76/377 (20%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGY-----------------LLNGQLDP------------ 110
AL VF+ +P R+ ++N +I L ++P
Sbjct: 68 ALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKAC 127
Query: 111 --------ARQVFDQMPQRDLVSWNVMISG----YVRNKSLSAARNLF------------ 146
+QV + + LV +++ YV S+ A LF
Sbjct: 128 AVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRN 187
Query: 147 ----EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIE 202
E + +VV N M+ GYA+ G AAR +FDRM +++ +SWN +++ Y QNG +
Sbjct: 188 LVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYK 247
Query: 203 EACMLFESKANWEVVSWN--SLMGGFVKQKRLGD---AKWIF---DRMPVR-DEVSWNTM 253
EA +F V N +L+ RLG KW+ ++ +R D+V + +
Sbjct: 248 EAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSAL 307
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNT 309
+ YA+ + +A ++FE P +V TW A++ G +GK ++ M + +
Sbjct: 308 VDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSD 367
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFD 364
V++ A+++ +D R F M + + M+ ++G + A L
Sbjct: 368 VTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELIL 427
Query: 365 RMP-QHDCISWAAIIAG 380
MP + D + W A++
Sbjct: 428 NMPMKPDDVIWKALLGA 444
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 55/292 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF-- 115
++++ NV + + R G +A +F+ M +RS VS+N MISGY NG A ++F
Sbjct: 196 EFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHR 255
Query: 116 -----DQMPQR---------------------------------DLVSWNVMISGYVRNK 137
D +P R D V + ++ Y +
Sbjct: 256 MMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCG 315
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA 193
S+ A +FE +P+ +V++WN ++ G A +G A+ RM + +++++ +L+
Sbjct: 316 SIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILS 375
Query: 194 AYVQNGRIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DE 247
A G ++E F N ++ + ++ + L +A+ + MP++ D+
Sbjct: 376 ACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDD 435
Query: 248 VSWNTMITGYAQNNYLA----EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
V W ++ + + A+ L + AP D + A+ + Y +G D
Sbjct: 436 VIWKALLGASKMHKNIKIGMRAAEVLMQMAP-HDSGAYVALSNMYASSGNWD 486
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/572 (40%), Positives = 335/572 (58%), Gaps = 15/572 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE------EA 273
N L+ + K RL A+ +F+ MP R+ +W + ++ N +EA F E
Sbjct: 101 NLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGER 160
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIF------DAMPEKNTVSWNAMIAGYVQTKRMDM 327
P + F+ + +D+ R I +P N V A+I+ Y + R+D
Sbjct: 161 PDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLP--NVVVGTAVISMYGKCGRLDD 218
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
AR FE + KN +WN M+T Y G A LF M D + W A+IA YAQ G
Sbjct: 219 ARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRG 278
Query: 388 EDSLRLFIEMKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+ +L L+ M + + F +V+ CA L++L+ G+ +H ++ F+A V NA
Sbjct: 279 KQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNA 338
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG ++EA F + KD ISWNT+I+ YA HG AL+L++ M G+KP
Sbjct: 339 LVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPT 398
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
++T VG+LSACSH GLV G +YFY M D+ + P+ H+ C++DLLGR GRL EA+ ++
Sbjct: 399 EVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVL 458
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
K+MP + +A W +LLGAC+ +G + +AA+ + + P +G YVLLSN+YAA+GRW
Sbjct: 459 KSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWK 518
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DV K+R M RGVKK G SW+E+ + VH F GD+ HP+ + IY L ++ ++K G
Sbjct: 519 DVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLG 578
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V T V HD+ EEEKE +L HSEKLA+ YG + +P +R++KNLRVC DCH A K
Sbjct: 579 YVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATK 638
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S+I GR I++RD RFH F GSCSC DYW
Sbjct: 639 FMSRITGRKIVVRDAARFHLFENGSCSCRDYW 670
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 200/465 (43%), Gaps = 60/465 (12%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE- 185
N++I Y + L AR LFE MP R+V +W ++ ++ NG A F RM + E
Sbjct: 101 NLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGER 160
Query: 186 ---ISWNGLL-------AAYVQNGR-IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
++++ +L AA + GR I + N VV +++ + K RL D
Sbjct: 161 PDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPN--VVVGTAVISMYGKCGRLDD 218
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV 294
A+ F+ + ++ V+WN M+T Y + EA LF E D W AM++ Y Q+G+
Sbjct: 219 ARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRG 278
Query: 295 DEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNT 345
+A ++ +M + + ++ +I + + R + + N + N
Sbjct: 279 KQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNA 338
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
++ Y + G + A ++F M D ISW II+ YA G+S+ +L L+ EM G +
Sbjct: 339 LVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPT 398
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
F +LS C+ HG LV G + + + +
Sbjct: 399 EVTFVGLLSACS-----------HGGLVADGLDYFYRMQD-------------------D 428
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ V + +I R G +A ++ +SM I+ + + + +L AC G +++
Sbjct: 429 HRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMP---IQANAVQWMSLLGACKTHGDLKR 485
Query: 526 GTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
G + ++ +P S Y + ++ AGR + + + K M
Sbjct: 486 GVR---AADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIM 527
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 154/330 (46%), Gaps = 31/330 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPK 151
N +I Y G+L AR++F+ MP R++ +W V ++ + N S A R +++ +
Sbjct: 101 NLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGER 160
Query: 152 RDVVSWNTMLSGYAQNGYA--DAARRI--FDRM--LEKNEISWNGLLAAYVQNGRIEEAC 205
D V+++ +L+ AQ G A D R I + R+ L N + +++ Y + GR+++A
Sbjct: 161 PDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDAR 220
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
FE V+WN++M + R +A +F M D V WN MI YAQ+ +
Sbjct: 221 AAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQ 280
Query: 266 AQRLFEE-------APVKDVFTWTAMVSG---YVQNGKVDEARMI---FDAMPEKNTVSW 312
A L+ AP + F V ++ G+ AR+ FDA N +
Sbjct: 281 ALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDA----NLLVS 336
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC- 371
NA++ Y + +D A ++F +M K+ SWNT+I+ YA G A L+ M
Sbjct: 337 NALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVK 396
Query: 372 ---ISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+++ +++ + G D L F M+
Sbjct: 397 PTEVTFVGLLSACSHGGLVADGLDYFYRMQ 426
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 152/374 (40%), Gaps = 68/374 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSY------------------ 95
++ W VA+ NGC AL F M P R + S
Sbjct: 127 NVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGRE 186
Query: 96 ---NAMISGYLLN--------------GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
A ISG L N G+LD AR F+++ ++ V+WN M++ Y +
Sbjct: 187 IHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGR 246
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN--------- 189
A LF M D V WN M++ YAQ+G A ++ M + +++
Sbjct: 247 DREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVID 306
Query: 190 --GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
L+A Q I AN V N+L+ + K L +A +F M ++DE
Sbjct: 307 VCAELSALKQGRAIHARVRATNFDANLLVS--NALVHMYGKCGCLDEALDVFHSMKLKDE 364
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEA-----R 298
+SWNT+I+ YA + + +A L++E ++ V T+ ++S G V + R
Sbjct: 365 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYR 424
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEIT 357
M D + + + +I + R+ A + ++M + N W +++ G++
Sbjct: 425 MQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLK 484
Query: 358 H----ARNLFDRMP 367
A + DR+P
Sbjct: 485 RGVRAADQVVDRVP 498
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 138/311 (44%), Gaps = 17/311 (5%)
Query: 367 PQHDCISWAAIIAGY----AQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLAS 421
P H W A S +SL I++ E L+ + +++ C +
Sbjct: 16 PSHPLTKWQQQQQNSSSNRANSFGERESLHKSIQLLESRELELDPVGYAALIRRCGAANA 75
Query: 422 LELGKQLHGQLVKVGFEAG--CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+ ++LH ++ + F+ N L+ MY KCG + A FE + ++V +W +
Sbjct: 76 ISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAM 135
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL--SACSHTGLVEKGTEYFYSMNRDY 537
A ++ +G +AL+ F M G +PD +T IL A +++G E + R
Sbjct: 136 AAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGRE-IHRYARIS 194
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G++PN T ++ + G+ GRLD+A+ + + ++ ++ TW A++ +L G+ +A
Sbjct: 195 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWK-NSVTWNAMMTNYKLDGRD---REA 250
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR---GVKKVTGYSWLEVQNK 654
E+ EM ++ + + YA GR + M D K+ T + ++V +
Sbjct: 251 LELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAE 310
Query: 655 VHTFSVGDTLH 665
+ G +H
Sbjct: 311 LSALKQGRAIH 321
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/653 (35%), Positives = 370/653 (56%), Gaps = 48/653 (7%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQ 197
A+ L ++ P R VV+W ++SG QNGY +A F +M ++ N+ ++ A
Sbjct: 11 AQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTA 70
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
C+ F K + +L G + K +G + FD Y
Sbjct: 71 ------LCLPFAGKQIHAI----ALKLGQINDKFVGCSA--FDM---------------Y 103
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWN 313
++ EAQRLF+E P ++V W A +S V +G+ +A F E + +++
Sbjct: 104 SKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFC 163
Query: 314 AMIAGYVQTKRMDMAREL--------FEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
A + + +D+ R+L FE +V+ N +I Y + E+ A +F+
Sbjct: 164 AFLNACADARCLDLGRQLHGLVIRSGFEG----DVSVANGIIDVYGKCKEVELAEMVFNG 219
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
M + + +SW ++A Q+ E + +F+ ++ G L +SV+S A ++ LE G
Sbjct: 220 MGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFG 279
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+ +H VK E FVG+AL+ MY KCGS+E+ F E+ +++++SWN MI+GYA
Sbjct: 280 RSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQ 339
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G A+ LFE M++ + + +T++ +LSACS G V+ G E F SM Y + P ++H
Sbjct: 340 GDVDMAMTLFEEMQSEAVA-NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEH 398
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y C+ D+LGRAG ++ A ++ MP P + WGALL ACR+YG+ EL + AA+ +F+++
Sbjct: 399 YACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLD 458
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
P+++G +VLLSN++AA+GRW + + VR +M+D G+KK G SW+ +NKVH F DT H
Sbjct: 459 PKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSH 518
Query: 666 PEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
I A L +L +++ G++ T L+D+ EEEK + YHSEK+A+A+G++++P
Sbjct: 519 ERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPP 578
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G PIR+ KNLR+C DCH+A K IS IVGR II+RDNNRFH F CSC D+W
Sbjct: 579 GVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 27/338 (7%)
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRD 122
A + + G A +F+ MP R+ +NA IS +L+G+ A F + + D
Sbjct: 99 AFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPD 158
Query: 123 LVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFD 178
L+++ ++ + L R L ++ + DV N ++ Y + + A +F+
Sbjct: 159 LITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFN 218
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
M +N +SW ++AA QN E+AC++F E + M V G +
Sbjct: 219 GMGRRNSVSWCTMVAACEQNDEKEKACVVF-LMGRKEGIELTDYMVSSVISAYAGISGLE 277
Query: 239 FDR----MPVR-----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYV 289
F R + V+ D + ++ Y + + + +++F E P +++ +W AM+SGY
Sbjct: 278 FGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYA 337
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR---MDMARELFEAMTCK-----NVA 341
G VD A +F+ M + ++ +I R + + E+FE+M +
Sbjct: 338 HQGDVDMAMTLFEEMQSEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAE 397
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAII 378
+ + ++G + A +MP IS W A++
Sbjct: 398 HYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALL 435
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 55/277 (19%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF-----------DQMP------------ 119
VFN M RR+SVS+ M++ N + + A VF D M
Sbjct: 216 VFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISG 275
Query: 120 ----------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
+ D+ + ++ Y + S+ +F MP+R++VSWN M+SG
Sbjct: 276 LEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISG 335
Query: 164 YAQNGYADAARRIFDRMLEK---NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS-- 218
YA G D A +F+ M + N ++ +L+A + G ++ +FES + +
Sbjct: 336 YAHQGDVDMAMTLFEEMQSEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPG 395
Query: 219 ---WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMIT-----GYAQNNYLAEAQRL 269
+ + + + A +MP+R +S W ++ G + +A A L
Sbjct: 396 AEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIA-ADNL 454
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
F+ P KD + + + G+ DEA ++ M +
Sbjct: 455 FKLDP-KDSGNHVLLSNMFAAAGRWDEATLVRKEMKD 490
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K + DI + + + + G + VF+ MP R+ VS+NAMISGY G +D A
Sbjct: 288 KACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMT 347
Query: 114 VFDQMPQRDLVSWNVMI---SGYVRNKSLSAARNLFEMMPKRDVVS-----WNTMLSGYA 165
+F++M + ++ +I S R ++ +FE M R + + +
Sbjct: 348 LFEEMQSEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLG 407
Query: 166 QNGYADAARRIFDRMLEKNEIS-WNGLLAA 194
+ G + A +M + IS W LL A
Sbjct: 408 RAGMVERAYEFVQKMPIRPTISVWGALLNA 437
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/572 (38%), Positives = 350/572 (61%), Gaps = 13/572 (2%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ S + + K L DA+ I + D N++I Y + + +A+ +F++
Sbjct: 54 YRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMR 113
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARE 330
KD+ +WT++++GY QN EA + M + N ++ +++ R+
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQ 173
Query: 331 LFE-AMTC---KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ A+ C ++V + ++ YA+ G++ A +FD++ + +SW A+I+G+A+ G
Sbjct: 174 IHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E +L F EM R G ++SV S+ A L +LE GK +H ++K + FVGN
Sbjct: 234 GESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNT 293
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
LL MY K GS+ +A F+ + +KD+++WN+M+ +A++G GK+A+ FE M+ G+ +
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLN 353
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT + IL+ACSH GLV++G YF M ++Y + P HY +V LLGRAG L+ A +
Sbjct: 354 QITFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFI 412
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
MP EP AA WGALL ACR++ ++ + AA+ +FE++P+++G VLL N+YA++G+W
Sbjct: 413 FKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWD 472
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
++VR+ M+ GVKK SW+E++N VH F D HP+ + IY E+ K++++G
Sbjct: 473 AAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEG 532
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V VL V ++EKE L+YHSEKLA+A+ ++ +PAG IR+MKN+R+C DCH+A K
Sbjct: 533 YVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFK 592
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ISK+ GR I++RD NRFHHFS GSCSCGDYW
Sbjct: 593 YISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 54/284 (19%)
Query: 77 CDSAL---HVFNSMPRRSSVSYNAMISGY---------------LLNGQLDPARQVFDQM 118
C S L +VF+ M R+ VS+ ++I+GY +L G+ P F +
Sbjct: 99 CRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 119 PQ------------------------RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+ D+ + ++ Y R + A +F+ + ++
Sbjct: 159 LKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CM 206
VSWN ++SG+A+ G ++A F ML E +++ + ++ + G +E+
Sbjct: 219 VSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAH 278
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ +S+ N+L+ + K + DA+ +FDR+ +D V+WN+M+T +AQ EA
Sbjct: 279 VIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEA 338
Query: 267 QRLFEEAPVKDVF----TWTAMVSGYVQNGKVDEARMIFDAMPE 306
FEE V+ T+ +++ G V E + F+ M E
Sbjct: 339 VSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE 382
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + R G D A VF+ + ++ VS+NA+ISG+ G + A F +M
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEML 245
Query: 120 QRDL----VSWNVMISGYVRNKSLSAAR----NLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ +++ + S R +L + ++ + K NT+L YA++G
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMI 305
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
AR++FDR+ K+ ++WN +L A+ Q G +EA FE
Sbjct: 306 DARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFE 343
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 338/577 (58%), Gaps = 31/577 (5%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW--NTMLSGYAQNGYADAARRIFDR 179
D ++ + +IS Y + L A+R +F P ++ NT+L YA N AA +F
Sbjct: 89 DPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSA 148
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M +++ +++ L+ A +G + ++ VK LG
Sbjct: 149 MPQRDSFTYSFLIKALSSSG----------------LTPLRAVHSHVVK---LGS----- 184
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+ D N +I Y++N +A ++FEE P +D +W + ++ V+ G+V AR
Sbjct: 185 ----IEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARR 240
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+FD MP+K+TVSWN ++ GY + +M+ A ELF+ M +NV SW+T+++GY + G+I A
Sbjct: 241 MFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMA 300
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R +FD+MP + ++W +++ AQ+G E++ RLF +MK L+ + S+L+ CA
Sbjct: 301 RVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAES 360
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE-EIVDKDVISWNTM 478
SL LGK++H + V NA++ M+CKCG V A + F+ EI +KD +SWNT+
Sbjct: 361 GSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTI 420
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I G+A HG G AL F MK G +PD +TM+ +LSAC+H G VE+G ++F +M RDYG
Sbjct: 421 IGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYG 480
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
++P +HY CM+DLLGR G ++EA L+K+MP++P+ WG+LL ACRL+ E AE A
Sbjct: 481 IVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAV 540
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ +++P NAG Y +LSN+YA +G+W D++K R++M+ G +K G SW+E+ H F
Sbjct: 541 NELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEF 600
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+VGD H + D+I ++ L +K G V + +L
Sbjct: 601 TVGDRKHSDSDQISEMVDRLSSHVKDVGCVPTAHELL 637
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 230/514 (44%), Gaps = 86/514 (16%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW--NVMISGYVRNKSLSAARNLFEMMP 150
++ + +IS Y L +L +R++F P ++ N ++ Y N AA +LF MP
Sbjct: 91 LAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMP 150
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACM 206
+RD +++ ++ + +G R + +++ I N L+ AY +NG +A
Sbjct: 151 QRDSFTYSFLIKALSSSGLT-PLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASK 209
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+FE + VSWNS M V+Q + A+ +FD MP +D VSWNT++ GY + + +A
Sbjct: 210 VFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDA 269
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
LF+ P ++V +W+ +VSGY + G ++ AR+IFD MP KN V+W M++ Q ++
Sbjct: 270 FELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVE 329
Query: 327 MARELFEAM-----------------TCKNVASW----------------------NTMI 347
A LF M C S N MI
Sbjct: 330 EAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMI 389
Query: 348 TGYAQSGEITHARNLFD-RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
+ + G + A +FD + + D +SW II G+A G+ + +L F +MK G R +
Sbjct: 390 DMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDA 449
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+VLS C ++ +E G+Q + + G V + H
Sbjct: 450 VTMINVLSACTHMGFVEEGRQHFSNMER------------------DYGIVPQIEH---- 487
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ MI R G ++A+ L +SM P+++ +LSAC + K
Sbjct: 488 --------YGCMIDLLGRGGLIEEAVGLIKSMP---WDPNEVIWGSLLSACR----LHKN 532
Query: 527 TEYF-YSMNRDYGVIP-NSKHYTCMVDLLGRAGR 558
EY ++N + P N+ +Y + ++ AG+
Sbjct: 533 VEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQ 566
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 189/392 (48%), Gaps = 53/392 (13%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + +NG A VF MPRR +VS+N+ ++ + G++ AR++FD+MP +D V
Sbjct: 192 NALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDKDTV 251
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
SWN ++ GY + + A LF+ MP+R+VVSW+T++SGY + G + AR IFD+M KN
Sbjct: 252 SWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKN 311
Query: 185 EISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGG--------------- 225
++W +++A QNG +EEA LF E+ +V + S++
Sbjct: 312 LVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGKRIHR 371
Query: 226 FVKQKRLG--------------------DAKWIFD-RMPVRDEVSWNTMITGYAQNNYLA 264
+V+ ++LG A ++FD + +D VSWNT+I G+A + +
Sbjct: 372 YVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGD 431
Query: 265 EAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAM 315
+A F + ++ D T ++S G V+E R F M + + M
Sbjct: 432 KALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCM 491
Query: 316 IAGYVQTKRMDMARELFEAMTC-KNVASWNTMITGYAQSGEITHAR---NLFDRMPQHDC 371
I + ++ A L ++M N W ++++ + +A N ++ +
Sbjct: 492 IDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNA 551
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
++A + YA++G D + ++MK G +
Sbjct: 552 GNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQ 583
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 155/320 (48%), Gaps = 22/320 (6%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D WN + + + G + A +F MP R+ VS++ ++SGY G ++ AR +FD+
Sbjct: 247 DKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDK 306
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAA 173
MP ++LV+W +M+S +N + A LF M + DV + ++L+ A++G
Sbjct: 307 MPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALG 366
Query: 174 RRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK-ANWEVVSWNSLMGGFVK 228
+RI R L ++ N ++ + + G + A +F+++ A + VSWN+++GGF
Sbjct: 367 KRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAM 426
Query: 229 QKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVF 279
A F +M ++ D V+ +++ ++ E ++ F + V +
Sbjct: 427 HGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIE 486
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG---YVQTKRMDMARELFEAM 335
+ M+ + G ++EA + +MP + N V W ++++ + + ++A +
Sbjct: 487 HYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKL 546
Query: 336 TCKNVASWNTMITGYAQSGE 355
N ++ + YA++G+
Sbjct: 547 QPSNAGNYAVLSNIYAEAGQ 566
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/702 (35%), Positives = 397/702 (56%), Gaps = 44/702 (6%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
++++S ++M G +++ ++ + D P L N +I+ Y + +AR + +
Sbjct: 14 KNAISTSSMRLGRVVHARI---VKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLT 68
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
P R+VVSW +++SG AQNG+ A + E E+ G V C +F+
Sbjct: 69 PARNVVSWTSLVSGLAQNGHFSTA------LFEFFEMRREG-----VAPNDFTFPC-VFK 116
Query: 210 SKANWEV-VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
+ A+ + V+ + VK R+ D +F D Y + +A++
Sbjct: 117 AVASLRLPVTGKQIHALAVKCGRILD---VFVGCSAFDM---------YCKTRLRDDARK 164
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSW----NAMIAGYV 320
LF+E P +++ TW A +S V +G+ EA F + N++++ NA G +
Sbjct: 165 LFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLL 224
Query: 321 QTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
M M +F + +V+ +N +I Y + +I + +F M + +SW +++A
Sbjct: 225 LDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAA 284
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPF--TSVLSTCANLASLELGKQLHGQLVKVGFE 438
Y Q+ E + L++ ++ E + S F +SVLS CA +A LELG+ +H VK E
Sbjct: 285 YVQNHEDEKASVLYLRSRK--EIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
FVG+AL+ MY KCG +E++ AF+E+ +K++++ N++I GYA G AL LFE M
Sbjct: 343 RNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDM 402
Query: 499 --KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
+ G P+ +T V +LSACS G VE G + F SM YG+ P ++HY+C+VD+LGRA
Sbjct: 403 APRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRA 462
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G +++A +K MP +P + WGAL ACR++GK L AAE +F+++P+++G +VLLS
Sbjct: 463 GMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLS 522
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N +AA+GRW + + VR +M+ G+KK GYSW+ V+N+VH F D H I L
Sbjct: 523 NTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLT 582
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
+L K++ G+ KL L+D+ EEEK + +HSEKLA+A+G++++P PIR+ KNLR
Sbjct: 583 KLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLR 642
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+C DCH+ K +S V R II+RDNNRFH F G CSC DYW
Sbjct: 643 ICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 173/418 (41%), Gaps = 99/418 (23%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ--------------RDL 123
+SA V P R+ VS+ +++SG NG A F +M + + +
Sbjct: 59 ESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAV 118
Query: 124 VSWNVMISG-------------------------YVRNKSLSAARNLFEMMPKRDVVSWN 158
S + ++G Y + + AR LF+ +P+R++ +WN
Sbjct: 119 ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWN 178
Query: 159 TMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACM-----LFE 209
+S +G A F + N I++ G L A +G + + M +F
Sbjct: 179 AYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNA-CSDGLLLDLGMQMHGLVFR 237
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN-------- 261
S + +V +N L+ + K K++ ++ IF M +++ VSW +++ Y QN+
Sbjct: 238 SGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 262 YLAEAQRLFEEAPV-------------------------------KDVFTWTAMVSGYVQ 290
YL + + E + +++F +A+V Y +
Sbjct: 298 YLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGK 357
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK------NVASWN 344
G ++++ FD MPEKN V+ N++I GY ++DMA LFE M + N ++
Sbjct: 358 CGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFV 417
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEM 397
++++ +++G + + +FD M I ++ I+ ++G E + +M
Sbjct: 418 SLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKM 475
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 155/359 (43%), Gaps = 32/359 (8%)
Query: 42 KRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR----RSSVSY-- 95
K L +R + ++ WN I+ + +G A+ F R +S+++
Sbjct: 155 KTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCG 214
Query: 96 --NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
NA G LL+ + VF D+ +N +I Y + K + ++ +F M ++
Sbjct: 215 FLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKN 274
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDR----MLEKNEISWNGLLAAYVQNGRIE--EACML 207
VSW ++++ Y QN + A ++ R ++E ++ + +L+A +E +
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 208 FESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
KA E + ++L+ + K + D++ FD MP ++ V+ N++I GYA +
Sbjct: 335 HAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDM 394
Query: 266 AQRLFEE------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSWNA 314
A LFE+ P + T+ +++S + G V+ IFD+M E ++
Sbjct: 395 ALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSC 454
Query: 315 MIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGE----ITHARNLFDRMPQ 368
++ + ++ A E + M K ++ W + G+ I A NLF P+
Sbjct: 455 IVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPK 513
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 412 VLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+L + +S+ LG+ +H ++VK + F+ N L+ MY K E A +
Sbjct: 12 LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
+V+SW ++++G A++G AL F M+ G+ P+D T + A + L G +
Sbjct: 72 NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQ-I 130
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+++ G I + D+ + D+A+ L +P E + TW A +
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP-ERNLETWNAYI 181
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/576 (40%), Positives = 345/576 (59%), Gaps = 28/576 (4%)
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK-DVFTWTA 283
+ L A+ IF M + S+NT+I +++N +A +F E+ V+ + FT+ +
Sbjct: 58 HRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPS 117
Query: 284 MVSGYVQNGKVDEARMI------FDAMPEKNTVSWNAMIAGYVQTKRMDMARELF----- 332
+ + ++ E R + F ++ VS ++ Y+ M+ A LF
Sbjct: 118 VFKACGRAERLREGRQVHGLAVKFGLDSDEFVVS--NVVRMYLSCGVMEDAHRLFYRRVF 175
Query: 333 ----------EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+ +V WN MI GY + GE+ ARNLFD MPQ +SW +IAGYA
Sbjct: 176 VDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYA 235
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
QSG+ ++++ +F EM+ N SVL + L +LELGK +H V+
Sbjct: 236 QSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDV 295
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+G+AL+ MY KCGS+E+A FE + ++V++W+T+IAG A HG KD L FE M+ G
Sbjct: 296 LGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAG 355
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+ P D+T +G+LSACSH GLV +G +F M R G+ P +HY CMVDLLGRAG L+E+
Sbjct: 356 VMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEES 415
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ L+ NMP +PD W ALLGAC+++G E+ ++ AE + E+ P ++G YV LSN+YA+
Sbjct: 416 EELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASL 475
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
G W V+KVRL M++ V+K G SW+E+ +H F V D HP+ +I++ L+E+ L
Sbjct: 476 GNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNL 535
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
G+ +T VL ++ EE+KE L YHSEK+A+A+G++S P+R+ KNLR+CEDCH
Sbjct: 536 ILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCH 595
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++IK ISKI R II+RD RFHHF GSCSC DYW
Sbjct: 596 SSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 12/195 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+V WNVMI GYVR L ARNLF+ MP+R VVSWN M++GYAQ+G+ A +F M
Sbjct: 192 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 251
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEEA--CMLFESKANWEV--VSWNSLMGGFVKQKRLG 233
+ N ++ +L A + G +E L+ + N V V ++L+ + K +
Sbjct: 252 MAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIE 311
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF----TWTAMVSGYV 289
A +F+ +P R+ V+W+T+I G A + + FE+ V T+ ++S
Sbjct: 312 KALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACS 371
Query: 290 QNGKVDEARMIFDAM 304
G V+E R FD M
Sbjct: 372 HAGLVNEGRWFFDHM 386
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N MI GY+ G+L+ AR +FD+MPQR +VSWNVMI+GY ++ A +F M
Sbjct: 194 VLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMA 253
Query: 153 DV----VSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEA 204
+V V+ ++L ++ G + + + + N ++ + L+ Y + G IE+A
Sbjct: 254 EVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKA 313
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQN 260
+FE VV+W++++ G R D F+ M + +V++ +++ +
Sbjct: 314 LQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHA 373
Query: 261 NYLAEAQRLFE 271
+ E + F+
Sbjct: 374 GLVNEGRWFFD 384
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 136/303 (44%), Gaps = 57/303 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ WNV I ++R G + A ++F+ MP+RS VS+N MI+GY +G A +VF +
Sbjct: 190 DGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFRE 249
Query: 118 MPQRD-------LVS---------------W-----------------NVMISGYVRNKS 138
M + LVS W + +I Y + S
Sbjct: 250 MQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGS 309
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ A +FE +PKR+VV+W+T+++G A +G A F+ M + +++++ GLL+A
Sbjct: 310 IEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSA 369
Query: 195 YVQNGRIEEACMLFE-----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G + E F+ S + + ++ + L +++ + MP++ D+V
Sbjct: 370 CSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDV 429
Query: 249 SWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGK---VDEARMIF 301
W ++ + + +R L E AP D ++ A+ + Y G V + R++
Sbjct: 430 IWKALLGACKMHGNVEMGKRVAEHLMELAP-HDSGSYVALSNIYASLGNWEGVAKVRLMM 488
Query: 302 DAM 304
M
Sbjct: 489 KEM 491
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/530 (40%), Positives = 321/530 (60%), Gaps = 40/530 (7%)
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM--------DMARELF------- 332
Y + G V +AR +FD MP ++ VSW +IAGY Q DM R F
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 333 -------------------EAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQ 368
A+ K +V + ++ YA+ ++ A +FDR+
Sbjct: 62 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ +SW A+IAG+A+ E +L F EM+R G ++S+ S A + +LE G+ +
Sbjct: 122 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWV 181
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
H L+K G + FVGN +L MY K GS+ +A F+ + +D+++WNTM+ A++G G
Sbjct: 182 HAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLG 241
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A+ FE ++ GI+ + IT + +L+ACSH GLV++G YF M +DY V P HY
Sbjct: 242 KEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYF-DMMKDYNVQPEIDHYVS 300
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
VDLLGRAG L EA + MP EP AA WGALLGACR++ ++ + AA+ +FE++P++
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDD 360
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G VLL N+YA++G+W D ++VR M+ GVKK SW++++N VH F D HP+
Sbjct: 361 TGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKS 420
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
IY EE+ ++K+ G+V +T VL + E+E+E L+YHSEK+A+A+ ++++PAG
Sbjct: 421 GDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGAS 480
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IR+MKN+R+C DCH+A K++SK+ R I++RD NRFHHFS GSCSCGDYW
Sbjct: 481 IRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 148/323 (45%), Gaps = 64/323 (19%)
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISW 188
Y + ++S AR++F+ MP RDVVSW +++GYAQN A + ML N ++
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 189 NGLLAAYVQNG--RIEEACMLFESKANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
LL A G I E K NW +V ++L+ + + +++ A +FDR+
Sbjct: 62 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121
Query: 245 RDEVSWNTMITGYAQNN-------YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
++EVSWN +I G+A+ AE QR FT+++M S + + G +++
Sbjct: 122 KNEVSWNALIAGFARKADGETTLMKFAEMQR---NGFGATHFTYSSMFSAFARIGALEQG 178
Query: 298 RMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
R + + + N M+ Y ++ M AR++F+ M +++ +WNTM+T
Sbjct: 179 RWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLT----- 233
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
AQ G ++++ F E+++ G +LN+ F SVL
Sbjct: 234 --------------------------ALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVL 267
Query: 414 STCANLASLELGKQLHGQLVKVG 436
+ C+ HG LVK G
Sbjct: 268 TACS-----------HGGLVKEG 279
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 117/290 (40%), Gaps = 82/290 (28%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMPKR-------- 152
Y G + AR VFD+MP RD+VSW +I+GY +N + A L +M+ R
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 153 ------------------------------DVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
DV + +L YA+ D A +FDR++
Sbjct: 62 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFES-------------------------------- 210
KNE+SWN L+A + + E M F
Sbjct: 122 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWV 181
Query: 211 -----KANWEVVSW--NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
K+ ++ ++ N+++G + K + DA+ +FDRM RD V+WNTM+T AQ
Sbjct: 182 HAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLG 241
Query: 264 AEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
EA FEE + T+ ++++ G V E + FD M + N
Sbjct: 242 KEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNV 291
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MYCKCG+V +A H F+++ +DV+SW +IAGYA++ +A+ L M +P+ T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+L A G G E +++ Y + + ++D+ R ++D A + +
Sbjct: 61 FTSLLKATGACGGCSIG-EQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 570 PFEPDAATWGALLG--ACRLYGKTELAEKAAEVIFEMEPENAG-MYVLLSNLYAASGRWG 626
+ +W AL+ A + G+T L + A EM+ G + S++++A R G
Sbjct: 120 -VSKNEVSWNALIAGFARKADGETTLMKFA-----EMQRNGFGATHFTYSSMFSAFARIG 173
Query: 627 DVSKVR 632
+ + R
Sbjct: 174 ALEQGR 179
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + + + R D A+ VF+ + ++ VS+NA+I+G+ + F +
Sbjct: 90 DEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAE 149
Query: 118 MPQRDL----VSWNVMISGYVRNKSLSAAR----NLFEMMPKRDVVSWNTMLSGYAQNGY 169
M + +++ M S + R +L R +L + K NTML YA++G
Sbjct: 150 MQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGS 209
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
AR++FDRM +++ ++WN +L A Q G +EA FE
Sbjct: 210 MVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFE 249
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ S + ++ N M+ Y +G + AR+VFD+M +RDLV+WN M++ +
Sbjct: 184 HLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKE 243
Query: 142 ARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKN-------EISWNG 190
A FE + K + +++ ++L+ + G + FD M + N +S+
Sbjct: 244 AVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVD 303
Query: 191 LLAAYVQNGRIEEACM-LFESKANWEVVSWNSLMGG 225
LL + G ++EA + +F+ W +L+G
Sbjct: 304 LLG---RAGLLKEALIFVFKMPMEPTAAVWGALLGA 336
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/466 (45%), Positives = 292/466 (62%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
+ +I Y + + +FE++ ++ TM++ A+ G+I ARNLFD MPQ D +
Sbjct: 149 SGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFV 208
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
SW A+IAGYAQ G S ++L LF M+ G ++N SV++ C +L +L+ GK H +
Sbjct: 209 SWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYI 268
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
K + +G AL+ MY KCG+V+ A F E+ +K+V +W+T I G A +G+G+ L
Sbjct: 269 EKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCL 328
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
LF MK GI P++IT + +L CS G V++G +F SM RD+G+ P +HY CMVDL
Sbjct: 329 ELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDL 388
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
GRAGRL+EA N + MP +P A WGALL ACR+Y EL E A+ + E+E +N G Y
Sbjct: 389 YGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAY 448
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
V LSN+YA +G W VS VR M+ G+ K+ G S +EV +VH F GD HP D I
Sbjct: 449 VSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIE 508
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
E+ +LK G+V ST VL D+ EEEKE L HSEK+A+A+G+ S+ G PIR++
Sbjct: 509 TMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIV 568
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLR+C DCH+ K ISKI R II+RD NRFHHF G CSC D+W
Sbjct: 569 KNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDGECSCKDFW 614
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
L +VF+ + + DLV M+S + + ARNLF+ MP+RD VSWN M++GYAQ
Sbjct: 161 LSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQR 220
Query: 168 GYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSW 219
G + A +F M ++ NE+S ++ A G +++ + ++K V
Sbjct: 221 GQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLG 280
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPV 275
+L+ + K + A +F M ++ +W+T I G A N Y + LF E
Sbjct: 281 TALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIA 340
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARE 330
+ T+ +++ G G VDE R FD+M + + + M+ Y + R++ A
Sbjct: 341 PNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALN 400
Query: 331 LFEAMTCK-NVASWNTMITG 349
M K + +W ++
Sbjct: 401 FINTMPLKPHAGAWGALLNA 420
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 36/267 (13%)
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL--NRSPFTSVL 413
+ ++ + D+ + + ++I Y++S S + + ++ + + + + F ++
Sbjct: 59 LLYSNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLV 118
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY---------------------- 451
TCA ++ E G +HG L+K GFE V + L+ MY
Sbjct: 119 RTCAQ-SACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLV 177
Query: 452 ---------CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
KCG + A + F+ + +D +SWN MIAGYA+ G ++AL LF+ M+ G
Sbjct: 178 CQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDG 237
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+K ++++M+ +++AC+H G +++G ++ ++ + T +VD+ + G +D A
Sbjct: 238 VKVNEVSMISVVTACTHLGALDQG-KWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRA 296
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYG 589
+ M E + TW +G + G
Sbjct: 297 LKVFWEMN-EKNVYTWSTAIGGLAMNG 322
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 173/416 (41%), Gaps = 83/416 (19%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF------EMMP 150
A+I ++ L +Q+ Q+ L++ ++ +V + ++ NL +
Sbjct: 14 ALIDSFI---TLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCA 70
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI-SWNGLLAAYVQNGRIEEACMLFE 209
K + + N+M+ Y+++ + + ++++L+ N++ S + ++ + AC
Sbjct: 71 KPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSACE--- 127
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
+ ++ G +K F+ P + + +I YA+ + L+ R+
Sbjct: 128 --------AGPAVHGALIKHG--------FEYDPHVE----SGLIFMYAEMSCLSSCHRV 167
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
FE D+ T MVS + G + AR +FD+MP+++ VSWNAMIAGY Q + A
Sbjct: 168 FESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREAL 227
Query: 330 ELFEAM-----------------TCKNVASWN----------------------TMITGY 350
LF+ M C ++ + + ++ Y
Sbjct: 228 NLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMY 287
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ G + A +F M + + +W+ I G A +GY + L LF MK G N F
Sbjct: 288 FKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFI 347
Query: 411 SVLSTCANLASLELGKQLHGQLVKV-GFEA-----GCFVGNALLVMYCKCGSVEEA 460
SVL C+ + ++ G+ + + G E GC V +Y + G +EEA
Sbjct: 348 SVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVD-----LYGRAGRLEEA 398
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 167/396 (42%), Gaps = 35/396 (8%)
Query: 4 NNRLRQLHSSCILHQHTQSINR-LQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIR 62
N+ +R S H+ Q N+ LQS +P ++S + PA +
Sbjct: 78 NSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSACEAGPAVHGALI 137
Query: 63 QWNVAITTHMRNG---------CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
+ H+ +G C S VF S+ + V M+S G + AR
Sbjct: 138 KHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARN 197
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGY 169
+FD MPQRD VSWN MI+GY + A NLF++M K + VS ++++ G
Sbjct: 198 LFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGA 257
Query: 170 ADAARRIFDRMLEKNEISW-----NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMG 224
D + +EKN+I L+ Y + G ++ A +F V +W++ +G
Sbjct: 258 LDQGKWA-HAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIG 316
Query: 225 GFV----KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
G QK L ++ +E+++ +++ G + ++ E + F+
Sbjct: 317 GLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIE 376
Query: 281 -----WTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDM----ARE 330
+ MV Y + G+++EA + MP K + +W A++ K M++ +R+
Sbjct: 377 PRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRK 436
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
L E + KN ++ ++ YA +G N+ M
Sbjct: 437 LIE-VEGKNHGAYVSLSNIYADTGNWDRVSNVRQSM 471
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 138/329 (41%), Gaps = 44/329 (13%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+I Y LS+ +FE + K D+V TM+S A+ G AR +FD M +++ +SW
Sbjct: 151 LIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSW 210
Query: 189 NGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
N ++A Y Q G+ EA LF+ VS S++ L KW
Sbjct: 211 NAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAH----- 265
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
Y + N + L TA+V Y + G VD A +F M
Sbjct: 266 -----------AYIEKNKIQMTVNL-----------GTALVDMYFKCGNVDRALKVFWEM 303
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMITGYAQSGEITHAR 360
EKN +W+ I G ELF M + +A ++ +++ G + G + R
Sbjct: 304 NEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGR 363
Query: 361 NLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ FD M + I + ++ Y ++G E++L M + + + ++L+
Sbjct: 364 SHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPL---KPHAGAWGALLNA 420
Query: 416 CANLASLELGKQLHGQLVKV-GFEAGCFV 443
C ++ELG+ +L++V G G +V
Sbjct: 421 CRMYKNMELGEFASRKLIEVEGKNHGAYV 449
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/542 (40%), Positives = 326/542 (60%), Gaps = 9/542 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + NT++ Y+ L A+++F++ K V +W M+ + Q + +EA +FD M
Sbjct: 119 DTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMM 178
Query: 306 EKNTVSWNAM-----IAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEI 356
+ V N + + + + + M + + E + ++V ++ Y + G +
Sbjct: 179 KSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCV 238
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR+LFD+ + + SW +I G+ + E++L LF EM+ G + ++ S+L C
Sbjct: 239 QLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLAC 298
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
+L +LELGK LH + K + +G AL+ MY KCGS+E A F E+ +KDV++W
Sbjct: 299 THLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWT 358
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
+I G A G ++AL F+ M G+KPD IT VG+L+ACSH G V++G +F SM+
Sbjct: 359 ALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDT 418
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
YG+ P +HY +VD+LGRAGR+ EA+ L+K+MP PD G LLGACR++G E AE+
Sbjct: 419 YGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAER 478
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
AA+ + E++P ++G YVLLSN+Y +S +W + + R M +RG++K G S +EV VH
Sbjct: 479 AAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVH 538
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
F GD+ H + I LE++ KLK G+V VL D+ EEEKE L HSEKLA+
Sbjct: 539 EFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAI 598
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+G+LS G PIRV+KNLR+C DCH+A K ISK+ R II+RD NRFHHF G+CSC
Sbjct: 599 AFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRG 658
Query: 777 YW 778
+W
Sbjct: 659 FW 660
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
F+ T + ++ ++ +SG + +AR +F ++P + +II G +++
Sbjct: 17 FFDPFTASKIVAFCSL----QESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEA 72
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L + EM G +R F S+ +C N + GKQ+H K+GF + + N L+ M
Sbjct: 73 LLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNM 129
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES-MKTVGIKPDDIT 509
Y CG + A F+++ DK V+SW TMI +A+ +A+ LF+ MK+ +KP+++T
Sbjct: 130 YSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVT 189
Query: 510 MVGILSACSHT---GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+V +L+AC+ +V++ EY V+ N T ++D+ + G + A++L
Sbjct: 190 LVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLN----TVLMDVYCKCGCVQLARDLF 245
Query: 567 KNMPFEPDAATWGALL 582
E + +W ++
Sbjct: 246 DKAQ-EKNLFSWNIMI 260
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 148/334 (44%), Gaps = 26/334 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D N + + GC SA VF+ M ++ VS+ MI + Q + A ++FD+M
Sbjct: 119 DTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMM 178
Query: 120 QRDLVSWNV-----MISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYA 170
+ + V N +++ R + L+ + + E + + R VV ++ Y + G
Sbjct: 179 KSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCV 238
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGF 226
AR +FD+ EKN SWN ++ +V++ EEA +LF + V+ SL+
Sbjct: 239 QLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLAC 298
Query: 227 VKQKRLGDAKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
L KW+ + + +V+ T ++ YA+ + A ++F E P KDV TWT
Sbjct: 299 THLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWT 358
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMT-- 336
A++ G G+ + A FD M K + +++ ++A +D F +M+
Sbjct: 359 ALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDT 418
Query: 337 ---CKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ + ++ ++G I A L MP
Sbjct: 419 YGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 139/299 (46%), Gaps = 25/299 (8%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D + N +++ Y L +AR +F+ M + VVSW TM+ +AQ + A R+FDRM+
Sbjct: 119 DTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMM 178
Query: 182 EK-----NEISWNGLLAAYVQN------GRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
+ NE++ +L A + RI E + E VV LM + K
Sbjct: 179 KSENVKPNEVTLVNVLTACARARDLAMVKRIHE--YIDEHGFGRHVVLNTVLMDVYCKCG 236
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVS 286
+ A+ +FD+ ++ SWN MI G+ +++ EA LF E K D T +++
Sbjct: 237 CVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLL 296
Query: 287 GYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G ++ + + + ++ + A++ Y + ++ A ++F M K+V +
Sbjct: 297 ACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMT 356
Query: 343 WNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
W +I G A G+ +A FD M + D I++ ++A + +G+ ++ + F M
Sbjct: 357 WTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSM 415
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 32/158 (20%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + + + G ++A+ VF+ MP + +++ A+I G + GQ + A Q FD+
Sbjct: 320 DVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDE 379
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M + + K D +++ +L+ + G+ D F
Sbjct: 380 MHIKGV---------------------------KPDAITFVGVLAACSHAGFVDEGISHF 412
Query: 178 DRMLEKNEIS-----WNGLLAAYVQNGRIEEACMLFES 210
+ M + I + GL+ + GRI EA L +S
Sbjct: 413 NSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKS 450
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 335/555 (60%), Gaps = 12/555 (2%)
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSG---- 287
+ +F ++ + +W +I YA L++A + + V FT++A+ S
Sbjct: 63 RLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAV 122
Query: 288 -YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
+ G A+ + + NA+I YV+ + AR +F+ M ++V SW +
Sbjct: 123 RHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGL 182
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I Y + G++ AR+LFD +P D ++W A++ GYAQ+ D+L +F ++ G ++
Sbjct: 183 IVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDE 242
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG--CFVGNALLVMYCKCGSVEEAYHAF 464
V+S CA L + + + GF G VG+AL+ MY KCG+VEEAY F
Sbjct: 243 VTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVF 302
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ + +++V S+++MI G+A HG + A+ LF M G+KP+ +T VG+L+ACSH GLV+
Sbjct: 303 KGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVD 362
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + F SM + YGV P ++ Y CM DLL RAG L++A L++ MP E D A WGALLGA
Sbjct: 363 QGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGA 422
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
++G ++AE A++ +FE+EP+N G Y+LLSN YA++GRW DVSKVR +R++ +KK
Sbjct: 423 SHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNP 482
Query: 645 GYSWLEVQN-KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G+SW+E +N +H F GD HP+ + I L +L +LK G+ + + + + + EK
Sbjct: 483 GWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGINDREK 542
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
+L HSEKLA+A+G+LS G I++MKNLR+CEDCH + SK+ GR I++RDN R
Sbjct: 543 RLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNTR 602
Query: 764 FHHFSGGSCSCGDYW 778
FHHF G+CSC ++W
Sbjct: 603 FHHFLNGACSCSNFW 617
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 202/436 (46%), Gaps = 30/436 (6%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSL-------SAARNLFEMMPKRDVVSWNTM 160
L+ A++V Q+ ++L + +++ +R + S R LF + + +W +
Sbjct: 21 LNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWTAL 80
Query: 161 LSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAA-----YVQNGRIEEACMLFESK 211
+ YA G A + M ++ +++ L +A + G A L
Sbjct: 81 IRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGG 140
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+ ++ N+++ +VK L A+ +FD MP RD +SW +I Y + + A+ LF+
Sbjct: 141 FSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFD 200
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVSWNAMIAGYVQ---TKR 324
PVKD+ TWTAMV+GY QN +A +F D E + V+ +I+ Q +K
Sbjct: 201 GLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKY 260
Query: 325 MDMARELFEAM---TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
+ R++ E+ NV + +I Y++ G + A ++F M + + S++++I G+
Sbjct: 261 ANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGF 320
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAG 440
A G + +++LF +M G + N F VL+ C++ ++ G+QL + K G
Sbjct: 321 AIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPT 380
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
+ + + + G +E+A E + ++ D W ++ A H G + S +
Sbjct: 381 AELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLG--ASHVHGNPDVAEIASKR 438
Query: 500 TVGIKPDDITMVGILS 515
++PD+I +LS
Sbjct: 439 LFELEPDNIGNYLLLS 454
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 149/300 (49%), Gaps = 41/300 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA+I Y+ G L AR VFD+MP+RD++SW +I Y R + AAR+LF+ +P +D+V
Sbjct: 149 NAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMV 208
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
+W M++GYAQN A +F R+ +E +E++ G+++A Q G
Sbjct: 209 TWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGA--------SKY 260
Query: 212 ANW-EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
ANW ++ +S G +GD + + + +I Y++ + EA +F
Sbjct: 261 ANWIRDIAESSGFG-------VGD-----------NVLVGSALIDMYSKCGNVEEAYDVF 302
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMD 326
+ ++VF++++M+ G+ +G+ A +F M E N V++ ++ +D
Sbjct: 303 KGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVD 362
Query: 327 MARELFEAM-TCKNVAS----WNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
++LF +M C VA + M +++G + A L + MP + D W A++
Sbjct: 363 QGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGA 422
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 36/274 (13%)
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
++ R LF ++ + +W A+I YA G +L + M++ F+++ S C
Sbjct: 60 SYPRLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSAC 119
Query: 417 ANLASLELGKQLHGQ-LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS- 474
A + LG QLH Q L+ GF + +V NA++ MY KCGS+ A F+E+ ++DVIS
Sbjct: 120 AAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISW 179
Query: 475 ------------------------------WNTMIAGYARHGFGKDALMLFESMKTVGIK 504
W M+ GYA++ DAL +F ++ G++
Sbjct: 180 TGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVE 239
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSM--NRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
D++T+VG++SAC+ G K + + + +GV N + ++D+ + G ++EA
Sbjct: 240 IDEVTLVGVISACAQLG-ASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEA 298
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
++ K M E + ++ +++ ++G+ A K
Sbjct: 299 YDVFKGMR-ERNVFSYSSMIVGFAIHGRARAAIK 331
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 131/304 (43%), Gaps = 56/304 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ W I + R G +A +F+ +P + V++ AM++GY N A +VF ++
Sbjct: 175 DVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLR 234
Query: 120 Q-----------------------------RDL-------VSWNVMISG-----YVRNKS 138
RD+ V NV++ Y + +
Sbjct: 235 DEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGN 294
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA 194
+ A ++F+ M +R+V S+++M+ G+A +G A AA ++F MLE N +++ G+L A
Sbjct: 295 VEEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTA 354
Query: 195 YVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G +++ LF S V+ + + + L A + + MP+ D
Sbjct: 355 CSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGA 414
Query: 249 SWNTMI--TGYAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
W ++ + N +AE ++RLFE P ++ + + + Y G+ D+ + +
Sbjct: 415 VWGALLGASHVHGNPDVAEIASKRLFELEP-DNIGNYLLLSNTYASAGRWDDVSKVRKLL 473
Query: 305 PEKN 308
EKN
Sbjct: 474 REKN 477
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/511 (41%), Positives = 323/511 (63%), Gaps = 14/511 (2%)
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF------DAMPEKNTVSW 312
++ YL +++FE P +D+ +W ++SG QNG ++A M+ D P+ T+S
Sbjct: 142 ESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLS- 200
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMP 367
+++ + + + +E+ +N V +++I YA+ + + +F +P
Sbjct: 201 -SVLPIFAEYVNLLKGKEI-HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 258
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
QHD ISW +IIAG Q+G ++ L+ F +M + N F+S++ CA+L +L LGKQ
Sbjct: 259 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 318
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
LHG +++ F+ F+ +AL+ MY KCG++ A F+++ D++SW MI GYA HG
Sbjct: 319 LHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGH 378
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
DA+ LF+ M+ G+KP+ + + +L+ACSH GLV++ +YF SM +DY +IP +HY
Sbjct: 379 AYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYA 438
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+ DLLGR GRL+EA + +M EP + W LL ACR++ ELAEK ++ +F ++P+
Sbjct: 439 AVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ 498
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
N G YVLLSN+Y+A+GRW D K+R+ MRD+G+KK SW+E++NKVH F GD HP
Sbjct: 499 NIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPY 558
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
DRI L+ L +++++G+V T VLHDV EE+K ++L HSE+LA+ +GI+S PAG
Sbjct: 559 YDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGT 618
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
IRV KNLRVC DCH A K ISKIVGR I+
Sbjct: 619 TIRVTKNLRVCVDCHTATKFISKIVGREIVF 649
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 168/385 (43%), Gaps = 64/385 (16%)
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
Q++ ++VFD+ D+ S S Y L + R +FEMMPKRD+VSWNT++SG AQ
Sbjct: 119 QVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMPKRDIVSWNTVISGNAQ 173
Query: 167 NGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI----EEACMLFESKANWEVVS 218
NG + A + M L + + + +L + + + E + + +V
Sbjct: 174 NGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFI 233
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE---APV 275
+SL+ + K R+ D+ +F +P D +SWN++I G QN E + F++ A +
Sbjct: 234 GSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKI 293
Query: 276 K------------------------------------DVFTWTAMVSGYVQNGKVDEARM 299
K +VF +A+V Y + G + AR
Sbjct: 294 KPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARW 353
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGE 355
IFD M + VSW AMI GY A LF+ M + N ++ ++T + +G
Sbjct: 354 IFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGL 413
Query: 356 ITHARNLFDRMPQHDCI-----SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ A F+ M Q I +AA+ + G E++ +M S ++
Sbjct: 414 VDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI---EPTGSVWS 470
Query: 411 SVLSTCANLASLELGKQLHGQLVKV 435
++L+ C ++EL +++ +L V
Sbjct: 471 TLLAACRVHKNIELAEKVSKKLFTV 495
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 200/456 (43%), Gaps = 36/456 (7%)
Query: 4 NNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQ 63
N L Q+ S IL+Q + ++ T+ SKK + + R + DI
Sbjct: 107 NGDLNQM--SNILYQ-VNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVS 163
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
WN I+ + +NG + AL + M R S + ++++ + L +++
Sbjct: 164 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 223
Query: 120 QR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+ D+ + +I Y + + + +F M+P+ D +SWN++++G QNG D +
Sbjct: 224 RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 283
Query: 176 IFDRML----EKNEISWNGLLAAYVQNGRIEEACML----FESKANWEVVSWNSLMGGFV 227
F +ML + N +S++ ++ A + L S+ + V ++L+ +
Sbjct: 284 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 343
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTA 283
K + A+WIFD+M + D VSW MI GYA + + +A LF+ V+ V + A
Sbjct: 344 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMA 403
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELFEAMTCK 338
+++ G VDEA F++M + + + A+ + R++ A E M +
Sbjct: 404 VLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIE 463
Query: 339 NVAS-WNTMITGYAQSGEITHA----RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
S W+T++ I A + LF PQ + ++ + Y+ +G +D+ +L
Sbjct: 464 PTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ-NIGAYVLLSNIYSAAGRWKDARKL 522
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
I M+ G + + P S + + + G + H
Sbjct: 523 RIAMRDKG--MKKKPACSWIEIKNKVHAFVAGDKSH 556
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
G+ + + F SVL +C + L G+ +HG ++++G + NAL+ MY K S+EE
Sbjct: 5 GKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEG 64
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/449 (46%), Positives = 286/449 (63%), Gaps = 1/449 (0%)
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
L + +++NT+IT YA++G + AR LFD MP + +SW+A++ GY Q+G ++
Sbjct: 134 LLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREA 193
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
LR+F M+ R + + VL+ CA +LE GK +HG L G + F G AL+ M
Sbjct: 194 LRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDM 253
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCG V+ A FE + K+V++W TMI G A HG G +A+MLF M++ GI+PDDI
Sbjct: 254 YSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAF 313
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+G+L AC+H GLV+KG E F SM R YG+ P +HY CMVDLL R G L EA+ +++ MP
Sbjct: 314 IGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMP 373
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSK 630
EPDA WGAL+ CR + E AE A+ +EP+ +G YVLLSN+YAASGR +
Sbjct: 374 MEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASARE 433
Query: 631 VRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK-QDGFVY 689
+R MR++GV K G S +EV +H F VGD HP I + E++ +++ ++G++
Sbjct: 434 IRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIP 493
Query: 690 STKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
K VL D+ EEEKE L HSEKLA+A+ ++SI PIR+ KNLRVC DCH+ K IS
Sbjct: 494 DMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKNLRVCHDCHHVTKLIS 553
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K+ GR I++RD RFH F G+CSC DYW
Sbjct: 554 KVYGREIVVRDRTRFHLFKEGTCSCKDYW 582
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 20/269 (7%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
L D + D ++NT+IT YA+ LA+A+ LF+E P ++ +W+AMV+GYVQ
Sbjct: 128 LADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQA 187
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE-------LFEAMTCK-NVASW 343
G EA IF M ++ + ++ G + A E +A K N+
Sbjct: 188 GDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFG 247
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
++ Y++ GE+ A ++F+RM + ++W +I G A G +++ LF +M+ G R
Sbjct: 248 TALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIR 307
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEA-----GCFVGNALLVMYCKCGSV 457
+ F VL C + ++ G++L +V K G + GC V + + G +
Sbjct: 308 PDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVD-----LLARNGFL 362
Query: 458 EEAYHAFEEI-VDKDVISWNTMIAGYARH 485
EA +++ ++ D + W ++AG H
Sbjct: 363 YEAKEMIQKMPMEPDALIWGALMAGCRFH 391
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 154/358 (43%), Gaps = 53/358 (14%)
Query: 36 PSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY 95
P+ TL L S + + P + + TH D + V N++ R +
Sbjct: 70 PTPHTLPSLLKSMALSPAVPGA----AVLALTVHTHAVKLGLDRFVLVSNALIRVHAGFL 125
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ G LL L A V D ++N +I+ Y R L+ AR LF+ MP R+ V
Sbjct: 126 GSLADGLLL---LRTAAAV-------DASTFNTLITAYARAGRLADARALFDEMPARNAV 175
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CML 207
SW+ M++GY Q G A RIF RM + ++ G+LAA Q+G +E+ L
Sbjct: 176 SWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYL 235
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ +L+ + K + A +F+RM ++ ++W TMI G A + +EA
Sbjct: 236 KAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAV 295
Query: 268 RLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
LF E + ++ D + ++ G VD+ R +FD+M K +
Sbjct: 296 MLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIK------------ 343
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ + M+ A++G + A+ + +MP + D + W A++AG
Sbjct: 344 --------------PKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAG 387
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 21/290 (7%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
++N +I+ Y G+L AR +FD+MP R+ VSW+ M++GYV+ A +F M D
Sbjct: 145 TFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAED 204
Query: 154 VVSWNTMLSGY----AQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEAC 205
V +T+L G AQ+G + + + + ++ N L+ Y + G ++ A
Sbjct: 205 VRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAM 264
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP---VR-DEVSWNTMITGYAQNN 261
+FE V++W +++ G R +A +F +M +R D++++ ++
Sbjct: 265 DVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAG 324
Query: 262 YLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAM 315
+ + + LF+ K + + MV +NG + EA+ + MP E + + W A+
Sbjct: 325 LVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGAL 384
Query: 316 IAGYVQTKRMDMARELFE---AMTCKNVASWNTMITGYAQSGEITHARNL 362
+AG K ++ A + + + ++ + YA SG AR +
Sbjct: 385 MAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREI 434
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/456 (44%), Positives = 293/456 (64%), Gaps = 1/456 (0%)
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
R+ A L + +++NT+IT +A++G + AR+LFD MP+ + +SW+A++ GY Q
Sbjct: 143 RLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQ 202
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G ++L +F +M+ G R + + VL+ CA L +LE GK +HG L F+
Sbjct: 203 AGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFL 262
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
G AL+ MY KCG V+ FE + DK+V++W TMI G A HG G D+L LF M++ G+
Sbjct: 263 GTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGV 322
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
KPDDI +G L AC+HTGLV+KG E F SM +YG+ P +HY CMVDLL R G L EA+
Sbjct: 323 KPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEAR 382
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
++++ MP +PDA WGAL+ CR + ELAE + E+EP+ +G YVLL N+Y+ASG
Sbjct: 383 DMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASG 442
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
R ++R MR++GV+K G S +E++ +H F VGD HP I E++ +++
Sbjct: 443 RHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIR 502
Query: 684 -QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
++G+V K VL D+ EEE E L HSEKLA+A+ ++S PIR++KNLRVC+DCH
Sbjct: 503 LEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQDCH 562
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ K ISK+ GR II+RD RFH F G+CSC DYW
Sbjct: 563 HVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDYW 598
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
RL DA + D ++NT+IT +A+ +A+A+ LF+E P ++ +W+AMV+GYVQ
Sbjct: 143 RLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQ 202
Query: 291 NGKVDEARMIFDAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAMTCKN----VAS 342
G EA +F M + + ++ G + Q ++ + + + N V
Sbjct: 203 AGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFL 262
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
++ YA+ GE+ +F+ M + ++W +I G A G DSL LF +M+ G
Sbjct: 263 GTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGV 322
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLV-----KVGFEA-GCFVGNALLVMYCKCGS 456
+ + F L C + ++ G++L +V K E GC V + + G
Sbjct: 323 KPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVD-----LLARNGL 377
Query: 457 VEEAYHAFEEIVDK-DVISWNTMIAGYARH 485
+ EA E++ K D + W ++AG H
Sbjct: 378 LSEARDMVEKMPMKPDALIWGALMAGCRFH 407
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 159/360 (44%), Gaps = 55/360 (15%)
Query: 35 YPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVS 94
+P+ TL L S + + P R+ +A+ H L V N++ R
Sbjct: 85 FPTPHTLPSLLKSLALSPAVPGA----RRLALAVHAHAVRLGLAGFLLVNNALIR----- 135
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+ +G L G+L A + D ++N +I+ + R ++ AR+LF+ MP+R+
Sbjct: 136 ---VHAGLL--GRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNA 190
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES 210
VSW+ M++GY Q G A +F +M + ++ G+LAA Q G +E+
Sbjct: 191 VSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQ------- 243
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
W + G++K + RM V ++ YA+ + +F
Sbjct: 244 -GKW--------VHGYLKANNI--------RMTV---FLGTALVDMYAKCGEVQLGMEVF 283
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMD 326
E K+V WT M+ G +G+ ++ +F M + + +++ + T +D
Sbjct: 284 EGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVD 343
Query: 327 MARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
RELF +M + + M+ A++G ++ AR++ ++MP + D + W A++AG
Sbjct: 344 KGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAG 403
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 20/254 (7%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
++N +I+ + G++ AR +FD+MP+R+ VSW+ M++GYV+ A +F M +
Sbjct: 161 TFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQG 220
Query: 154 VVSWNTMLSGY----AQNGYADAARRIFDRMLEKNEISW-----NGLLAAYVQNGRIEEA 204
V +T+L G AQ G + + + L+ N I L+ Y + G ++
Sbjct: 221 VRPDDTVLVGVLAACAQLGALEQGKWVHG-YLKANNIRMTVFLGTALVDMYAKCGEVQLG 279
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQN 260
+FE + V++W +++ G R D+ +F +M D++++ +
Sbjct: 280 MEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHT 339
Query: 261 NYLAEAQRLFEE-----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNA 314
+ + + LF + + MV +NG + EAR + + MP K + + W A
Sbjct: 340 GLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGA 399
Query: 315 MIAGYVQTKRMDMA 328
++AG K +++A
Sbjct: 400 LMAGCRFHKNVELA 413
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 54/303 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D +N IT H R G A +F+ MP R++VS++AM++GY+ G A VF QM
Sbjct: 158 DASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQ 217
Query: 120 QR-----DLVSWNVM--------------ISGYVRNKSL--------------------S 140
+ D V V+ + GY++ ++
Sbjct: 218 AQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQ 277
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
+FE M ++V++W TM+ G A +G + +F +M ++ ++I++ G L A
Sbjct: 278 LGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACT 337
Query: 197 QNGRIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G +++ LF S N ++ + ++ + L +A+ + ++MP++ D + W
Sbjct: 338 HTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIW 397
Query: 251 NTMITG--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++ G + +N LAE + E P K + + + Y +G+ AR I + M E
Sbjct: 398 GALMAGCRFHKNVELAEYVIKHWIELEPDKS-GAYVLLGNIYSASGRHASAREIRNLMRE 456
Query: 307 KNT 309
K
Sbjct: 457 KGV 459
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 44/254 (17%)
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL----HGQ 431
A+I +A SG + +L L+ + R G S+L + A ++ ++L H
Sbjct: 58 ALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAH 117
Query: 432 LVKVGFEAGCFVGNALLVMYCKC-GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF--- 487
V++G V NAL+ ++ G + +A+ D ++NT+I +AR G
Sbjct: 118 AVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVAD 177
Query: 488 ----------------------------GKDALMLFESMKTVGIKPDDITMVGILSACSH 519
G++AL +F M+ G++PDD +VG+L+AC+
Sbjct: 178 ARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQ 237
Query: 520 TGLVEKGT---EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
G +E+G Y + N V T +VD+ + G + + + M + +
Sbjct: 238 LGALEQGKWVHGYLKANNIRMTVFLG----TALVDMYAKCGEVQLGMEVFEGMK-DKNVL 292
Query: 577 TWGALLGACRLYGK 590
W ++ ++G+
Sbjct: 293 AWTTMIKGLAMHGR 306
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/742 (34%), Positives = 406/742 (54%), Gaps = 44/742 (5%)
Query: 77 CDS---ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVM 129
CDS A F+++ +R+ S+ +++ + ++GQ + ++M Q D V++
Sbjct: 5 CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITA 64
Query: 130 ISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM-LEKN 184
+ +SL + +M+ D N +L+ Y + G A+R+F +M +N
Sbjct: 65 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 124
Query: 185 EISWNGLLAAYVQNGRIEEAC------MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
ISW+ + A+ +G + EA +L KA + +++ + D + I
Sbjct: 125 VISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMV--TILSACSSPALVQDGRMI 182
Query: 239 FDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFE--EAPVKDVFTWTAMVSGYVQNG 292
+ + + + N ++T Y + + EA+++F+ + ++DV +W M+S YV N
Sbjct: 183 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHND 242
Query: 293 KVDEARMIFDAM---PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC----KNVASWNT 345
+ +A ++ M P+K V++ ++++ + + + R L + + KNV N
Sbjct: 243 RGKDAIQLYQRMQLRPDK--VTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNA 300
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF---IEMKRYGE 402
+++ YA+ G T AR +FD+M Q ISW II+ Y + ++ LF +E+++ G
Sbjct: 301 LVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGS 360
Query: 403 RLNRSP----FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
P F ++L+ CA++++LE GK + Q G + VG A++ +Y KCG +E
Sbjct: 361 SQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIE 420
Query: 459 EAYHAFEEIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
EA F+ + + DV WN MIA YA+ G +AL LF M+ G++PD + V IL AC
Sbjct: 421 EARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLAC 480
Query: 518 SHTGLVEKGTEYFYSMNRDY-GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
SHTGL ++G YF SM +Y V +H+ C+ DLLGR GRL EA+ ++ +P +PDA
Sbjct: 481 SHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAV 540
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W +LL ACR + + A++ A + +EP A YV LSN+YA +W V+KVR M
Sbjct: 541 AWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMA 600
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
++GVKK G S +E+ +H F+ GD HP I L +L ++K+ G+V TK+VLH
Sbjct: 601 EQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLH 660
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
V E+EKE +L HSE+LA+A G++S P G P+RV KNLRVC DCH A K ISKI GR I
Sbjct: 661 FVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKI 720
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
++RD RFH F G CSC DYW
Sbjct: 721 VVRDPTRFHLFKDGKCSCQDYW 742
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 165/399 (41%), Gaps = 51/399 (12%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA A+ FD + Q + SW ++A +A SG S+++LR M++ G R + F
Sbjct: 2 YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV- 468
+ L +C + SL G ++H +V E V NALL MY KCGS+ A F ++
Sbjct: 62 ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 121
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++VISW+ M +A HG +AL F M +GIK MV ILSACS LV+ G
Sbjct: 122 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG-R 180
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ------------------------- 563
+S G ++ + GR G ++EA+
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 564 --------NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE-NAGMYVL 614
L + M PD T+ +LL AC L + I E E N +
Sbjct: 241 NDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNA 300
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
L ++YA G + V KM R + SW + + V L E ++
Sbjct: 301 LVSMYAKCGSHTEARAVFDKMEQRSI-----ISW----TTIISAYVRRRLVAEACHLFQQ 351
Query: 675 LEELEF-----KLKQDGFVYSTKL-VLHDVGEEEKEHML 707
+ ELE ++K D + T L DV E+ M+
Sbjct: 352 MLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMV 390
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 190/407 (46%), Gaps = 49/407 (12%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPR--RSSVSYNAMISGYLLNGQLDPARQVFDQMPQR- 121
N +T + R G + A VF++M R VS+N M+S Y+ N + A Q++ +M R
Sbjct: 199 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLRP 258
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIF 177
D V++ ++S + + R L + + +++V+ N ++S YA+ G AR +F
Sbjct: 259 DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVF 318
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
D+M +++ ISW +++AYV+ + EAC LF+ E + G ++
Sbjct: 319 DKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE---------------KNGSSQR 363
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGK 293
+ P D +++ T++ A + L + + + E+A D TA+V+ Y + G+
Sbjct: 364 V---KP--DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGE 418
Query: 294 VDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMIT 348
++EAR IFDA+ + V WNAMIA Y Q + A +LF M + V S+ +++
Sbjct: 419 IEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILL 478
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ +G ++ F M + + G D L +K E L + P
Sbjct: 479 ACSHTGLEDQGKSYFTSMTTE----YRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLP 534
Query: 409 -------FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+TS+L+ C N L+ K++ +L++ E C G L
Sbjct: 535 VKPDAVAWTSLLAACRNHRDLKRAKEVANKLLR--LEPRCATGYVAL 579
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 154/339 (45%), Gaps = 32/339 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP-RRSSVSYNAMISGYLLNGQLDPAR----QV 114
D+ WN+ ++T++ N A+ ++ M R V+Y +++S + R Q+
Sbjct: 227 DVVSWNIMLSTYVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQI 286
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+ +++++ N ++S Y + S + AR +F+ M +R ++SW T++S Y + A
Sbjct: 287 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 346
Query: 175 RIFDRMLE-----------KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
+F +MLE + +++ +L A +E+ M+ E A+ + S ++
Sbjct: 347 HLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVG 406
Query: 224 GGFV----KQKRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLAEAQRLF----EEAP 274
V K + +A+ IFD + R +V WN MI YAQ EA +LF E
Sbjct: 407 TAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGV 466
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-----NTVSWNAMIAGYV-QTKRMDMA 328
D F++ +++ G D+ + F +M + T+ +A + + R+ A
Sbjct: 467 RPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEA 526
Query: 329 RELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRM 366
E E + K + +W +++ ++ A+ + +++
Sbjct: 527 EEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKL 565
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
MY C S +A AF+ + +++ SW ++A +A G K+ L E M+ G++PD +T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ L +C + G + M D + + K ++++ + G L A+ + M
Sbjct: 61 FITALGSCGDPESLRDGIR-IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 570 PFEPDAATWGALLGACRLYG 589
+ +W + GA L+G
Sbjct: 120 ERTRNVISWSIMAGAHALHG 139
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/730 (31%), Positives = 397/730 (54%), Gaps = 59/730 (8%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----------------- 150
LD A ++FD+MP+RD ++WN ++ +++ + A LF +M
Sbjct: 576 LDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQV 635
Query: 151 ----------------------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+ +V N+++ Y++NG +++R++F+ M+++N SW
Sbjct: 636 CSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSW 695
Query: 189 NGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
N ++++Y + G +++A L + ++V+WNSL+ G+ + DA + R+ +
Sbjct: 696 NSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQI 755
Query: 245 RDEVSWNTMITGYAQNNY---LAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDE 296
+ I+ Q Y L + + ++ DV+ T ++ Y++ G +
Sbjct: 756 AGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPY 815
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQ 352
ARM+FD M EKN V+WN++I+G T + A L M + N +WN++++GYA
Sbjct: 816 ARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYAT 875
Query: 353 SGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
G+ A + +M ++ + +SW AI++G +++G + L++F++M+ G N +
Sbjct: 876 WGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSAT 935
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+S+L L+ L GK++H +K V AL+ MY K G ++ A F I
Sbjct: 936 ISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIK 995
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+K + SWN MI GYA G++ + +F +M GI+PD IT +LS C ++GLV +G +
Sbjct: 996 NKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWK 1055
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF M YGVIP +H +CMV+LLGR+G LDEA + ++ MP +PDA WGA L +C+++
Sbjct: 1056 YFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIH 1115
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
ELAE A + + +EP N+ Y+++ NLY+ RWGDV ++R M + V+ +SW
Sbjct: 1116 RDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSW 1175
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
+++ VH F HP++ IY L +L ++K+ G++ T+ + +V E EKE +L
Sbjct: 1176 IQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMKKSGYMPDTRCIHQNVSESEKEKLLM 1235
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
H+EKLA+ YG++ PIRV+KN +C DCH K+IS + R I+L++ R HHF
Sbjct: 1236 GHTEKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHTVAKYISVLRNREIVLQEGARVHHFR 1295
Query: 769 GGSCSCGDYW 778
G CSC + W
Sbjct: 1296 DGKCSCNNSW 1305
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/546 (23%), Positives = 242/546 (44%), Gaps = 78/546 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ N I + RNG +S+ VFNSM R+ S+N+++S Y G +D A + D+M
Sbjct: 660 NVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEME 719
Query: 120 ----QRDLVSWNVMISGYVRNKSLSAARNLFEMMP-------KRDVVSWNTMLSGYAQNG 168
+ D+V+WN ++SGY +K+LS R+ ++ K + S +++L + G
Sbjct: 720 TCGLKPDIVTWNSLLSGYA-SKALS--RDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPG 776
Query: 169 YADAARRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
+ I ++ +N++ ++ L+ Y++ G + A M+F+ +V+WNSL+
Sbjct: 777 LVKLGKAIHGYVI-RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLI 835
Query: 224 GGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYA----QNNYLAEAQRLFEEAPV 275
G L +A+ + RM + V+WN++++GYA LA ++ +
Sbjct: 836 SGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVE 895
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMAREL 331
+V +WTA++SG +NG IF M E+ +A I+ ++ + +E+
Sbjct: 896 PNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEV 955
Query: 332 FEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
N+ ++ YA+SG++ A +F + SW +I GYA
Sbjct: 956 HSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRG 1015
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
E+ + +F M G + FTSVLS C N + G + + L++ + G
Sbjct: 1016 EEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWK-YFDLMRSHY------GVIP 1068
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ +C C M+ R G+ +A ++ ++T+ +KPD
Sbjct: 1069 TIEHCSC-----------------------MVELLGRSGYLDEA---WDFIRTMPLKPDA 1102
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP--NSKHYTCMVDL---LGRAGRLDEA 562
LS+C + + E + V+ NS +Y M++L L R G ++
Sbjct: 1103 TIWGAFLSSCK----IHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERI 1158
Query: 563 QNLMKN 568
+N M N
Sbjct: 1159 RNSMSN 1164
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 153/331 (46%), Gaps = 44/331 (13%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + + A +FD MP+ D ++W I+ QSG E +++LF M+ G + S
Sbjct: 570 YGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTM 629
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+L C+N G+Q+HG ++++GFE+ + N+L+VMY + G +E + F +VD
Sbjct: 630 VKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVD 689
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+++ SWN++++ Y R G+ DA+ L + M+T G+KPD +T +LS + L
Sbjct: 690 RNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAV 749
Query: 530 FYSMNRDYGVIPNSKHY-----------------------------------TCMVDLLG 554
+ + G+ PN+ T ++D+
Sbjct: 750 LKRI-QIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYI 808
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE----NAG 610
+ G L A+ ++ +M E + W +L+ G L ++A +I ME E NA
Sbjct: 809 KTGYLPYAR-MVFDMMDEKNIVAWNSLISGLSYTG---LLKEAEALISRMEKEGIKSNAV 864
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
+ L + YA G+ V KM+ GV+
Sbjct: 865 TWNSLVSGYATWGKTEKALAVVGKMKKNGVE 895
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 43/314 (13%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE-DSLRLFIEMKRYGERL 404
+IT Y + GE +A +F + +SW + G + L F+ ++ G
Sbjct: 463 LITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNKGVNF 522
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE-AGCFVGNALLVMYCKCGSVEEAYHA 463
+ V CA L LG +HG L+K G + + V +AL+ Y +C S++ A
Sbjct: 523 DEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKI 582
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS----- 518
F+E+ +D ++WN ++ + G + A+ LF M+ G K D TMV +L CS
Sbjct: 583 FDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGF 642
Query: 519 ------HTGLVEKGTEYFYSM--------NRDYGVIPNSKHYTCMVDL-----------L 553
H ++ G E SM +R+ + + K + MVD
Sbjct: 643 AQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSY 702
Query: 554 GRAGRLDEAQNLMKNMP---FEPDAATWGALLGACRLYGKTELAEKAAEV-----IFEME 605
R G +D+A L+ M +PD TW +LL Y L+ A V I ++
Sbjct: 703 TRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSG---YASKALSRDAIAVLKRIQIAGLK 759
Query: 606 PENAGMYVLLSNLY 619
P + + LL +Y
Sbjct: 760 PNTSSISSLLQAVY 773
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 187/456 (41%), Gaps = 78/456 (17%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
+D+ I +++ G A VF+ M ++ V++N++ISG G L A + +M
Sbjct: 795 YDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRM 854
Query: 119 PQRDL----VSWNVMISGYV----RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ + V+WN ++SGY K+L+ + + + +VVSW +LSG ++NG
Sbjct: 855 EKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNF 914
Query: 171 DAARRIFDRMLE----------------------------------KNEISWN-----GL 191
+IF +M E KN ++ + L
Sbjct: 915 GNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATAL 974
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PVR 245
+ Y ++G ++ A +F N + SWN ++ G+ +R + +F+ M P
Sbjct: 975 VDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEP-- 1032
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFE-----EAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
D +++ ++++ + + E + F+ + + + MV ++G +DEA
Sbjct: 1033 DAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDF 1092
Query: 301 FDAMPEK-NTVSWNAMIAGYVQTKRMDMAR---ELFEAMTCKNVASWNTMITGYAQS--- 353
MP K + W A ++ + +++A + + + N A++ MI Y+
Sbjct: 1093 IRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 1152
Query: 354 GEITHARNLF--DRMPQHDCISWAAIIAG----YAQSGYSEDSLRLFIEMKRYGERLNRS 407
G++ RN +R+ D SW I YA+ D ++ E+ + + +S
Sbjct: 1153 GDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMKKS 1212
Query: 408 ---PFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
P T + N++ E K L G K+ G
Sbjct: 1213 GYMPDTRCIHQ--NVSESEKEKLLMGHTEKLAMTYG 1246
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/536 (40%), Positives = 331/536 (61%), Gaps = 13/536 (2%)
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PE 306
++ YA +N L A+ LF++ P +++F W ++ GY NG D A +++ M P+
Sbjct: 88 LVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPD 147
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNL 362
T+ + ++ + R + E + +++ +I YA+ G + A +
Sbjct: 148 NFTLPF--VLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRV 205
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD++ D + W +++A YAQ+G+ ++S+ L EM G R + +V+S+ A++A L
Sbjct: 206 FDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACL 265
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G+++HG + GF++ V AL+ MY KCGSV+ A FE + +K V+SWN +I GY
Sbjct: 266 PYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGY 325
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A HG AL LF+ M+ +PD IT VG+L+ACS L+++G + M RDYG+ P
Sbjct: 326 AMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPT 384
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HYTCM+DLLG G+LDEA +L++NM +PD+ WGALL +C+++G ELAE A E +
Sbjct: 385 VQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLI 444
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+EP+++G YV+L+N+YA SG+W V K+R M D+ +KK SW+EV+NKV+ F GD
Sbjct: 445 ELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGD 504
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILS 722
H D IYA L+ LE + + G+ T V HDV E+EK M+ HSE+LA+A+G++S
Sbjct: 505 VSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLIS 564
Query: 723 IPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G + + KNLR+CEDCH AIK ISKI+ R I +RD NR+H F G CSCGD+W
Sbjct: 565 TSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 188/480 (39%), Gaps = 124/480 (25%)
Query: 85 NSMPRRSSV--SYNAMISGYLLNGQLDPARQVFDQMPQ------RDLVSWNVMISGYVRN 136
+S P + + Y +++ + + L+P +Q+ Q +DL + ++ Y +
Sbjct: 38 DSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLAT--KLVHLYAVS 95
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLL 192
SL ARNLF+ +PK+++ WN ++ GYA NG D A ++ +ML+ + + +L
Sbjct: 96 NSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVL 155
Query: 193 AAYVQNGRIEEACMLFES--KANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
A I E + E K+ WE + +L+ + K + DA +FD++ VRD V
Sbjct: 156 KACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAV 215
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----------------------------FT 280
WN+M+ YAQN + E+ L E V F
Sbjct: 216 LWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFG 275
Query: 281 W-----------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
W TA++ Y + G V A +F+ + EK VSWNA+I
Sbjct: 276 WRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAII------------- 322
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
TGYA G A +LFD+M + D
Sbjct: 323 ------------------TGYAMHGLAVGALDLFDKMRKED------------------- 345
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALL 448
R + F VL+ C+ L+ G+ L+ +V+ G ++
Sbjct: 346 -------------RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMI 392
Query: 449 VMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ CG ++EAY + V D W ++ HG + A + E K + ++PDD
Sbjct: 393 DLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALE--KLIELEPDD 450
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 159/350 (45%), Gaps = 32/350 (9%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+A ++F+ +P+++ +N +I GY NG D A ++ +M L N + ++ S
Sbjct: 100 NARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACS 159
Query: 139 -LSA---ARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
LSA R++ E + K RD+ ++ YA+ G A R+FD+++ ++ + WN
Sbjct: 160 ALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNS 219
Query: 191 LLAAYVQNGRIEEACMLF-ESKANW---------EVVSWNSLMGGFVKQKRLGDAKWIFD 240
+LAAY QNG +E+ L E AN V+S ++ + + + W
Sbjct: 220 MLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHG 279
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
D+V +I YA+ + A LFE K V +W A+++GY +G A +
Sbjct: 280 -FQSNDKVK-TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDL 337
Query: 301 FDAMPEKNT---VSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQ 352
FD M +++ +++ ++A + + +D R L+ M V + MI
Sbjct: 338 FDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGH 397
Query: 353 SGEITHARNLFDRMP-QHDCISWAAIIAGYAQSG---YSEDSLRLFIEMK 398
G++ A +L M + D W A++ G +E +L IE++
Sbjct: 398 CGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELE 447
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 16/217 (7%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+TS+L +C + +L GKQLH Q +G + L+ +Y S+ A + F++I
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT- 527
+++ WN +I GYA +G +A++L+ M G++PD+ T+ +L ACS + +G
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 528 --EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
EY + + + ++D+ + G + +A + + DA W ++L A
Sbjct: 170 IHEYVIKSGWERDLFVGAA----LIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAA- 223
Query: 586 RLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSN 617
Y + +++ + EM P A + ++S+
Sbjct: 224 --YAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 153/355 (43%), Gaps = 38/355 (10%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
WNV I + NG D+A+ +++ M R + + ++ + R + + +
Sbjct: 116 WNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVI 175
Query: 120 ----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
+RDL +I Y + + A +F+ + RD V WN+ML+ YAQNG+ D +
Sbjct: 176 KSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESIS 235
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-----------KANWEVVSWNSLMG 224
+ R + N + V + + AC+ + ++N +V + +L+
Sbjct: 236 LC-REMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKT--ALID 292
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVF 279
+ K + A +F+R+ + VSWN +ITGYA + A LF E+ P D
Sbjct: 293 MYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRP--DHI 350
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEA 334
T+ +++ + +DE R +++ M ++ + MI ++D A +L
Sbjct: 351 TFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRN 410
Query: 335 MTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQ---HDCISWAAIIAGYAQSG 385
M+ K + W ++ G + A +++ + D ++ + YAQSG
Sbjct: 411 MSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSG 465
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 53/292 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-------Q 120
I + + GC A VF+ + R +V +N+M++ Y NG D + + +M +
Sbjct: 190 IDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTE 249
Query: 121 RDLVS---------------------W-----------NVMISGYVRNKSLSAARNLFEM 148
LV+ W +I Y + S+ A LFE
Sbjct: 250 ATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFER 309
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK---NEISWNGLLAA-----YVQNGR 200
+ ++ VVSWN +++GYA +G A A +FD+M ++ + I++ G+LAA + GR
Sbjct: 310 LREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGR 369
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--Y 257
M+ + V + ++ +L +A + M V+ D W ++
Sbjct: 370 ALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKI 429
Query: 258 AQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
N LAE ++L E P D + + + Y Q+GK + + M +K
Sbjct: 430 HGNVELAELALEKLIELEP-DDSGNYVILANMYAQSGKWEGVEKLRQVMIDK 480
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/537 (42%), Positives = 341/537 (63%), Gaps = 11/537 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N +I Y+++ +++R FE++P K TW++++S + QN + M N
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 311 SWNAMIAGYVQT----KRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARN 361
+ ++ ++ R D+ R + ++ K +V ++++ YA+ GEI +AR
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSV-HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARK 172
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+FD MPQ + ++W+ ++ GYAQ G +E++L LF E +N F+SV+S CAN
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
LELG+Q+HG +K F++ FVG++L+ +Y KCG E AY F E+ K++ WN M+
Sbjct: 233 LELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKA 292
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA+H + + LF+ MK G+KP+ IT + +L+ACSH GLV++G YF M ++ + P
Sbjct: 293 YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEP 351
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
KHY +VD+LGRAGRL EA ++ NMP +P + WGALL +C ++ TELA AA+ +
Sbjct: 352 TDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKV 411
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
FE+ P ++GM++ LSN YAA GR+ D +K R +RDRG KK TG SW+E +NKVHTF+ G
Sbjct: 412 FELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAG 471
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
+ H + IY L EL ++++ G++ T VL +V +EK +RYHSE+LA+A+G++
Sbjct: 472 ERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLI 531
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ PA RPIRVMKNLRVC DCHNAIK +S R+II+RDNNRFH F G CSC DYW
Sbjct: 532 TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 164/375 (43%), Gaps = 60/375 (16%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
DV ++++ YA+ G AR++FD M ++N ++W+G++ Y Q G EEA LF+
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA- 208
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-- 270
+F+ + V D S++++I+ A + L +++
Sbjct: 209 -------------------------LFENLAVND-YSFSSVISVCANSTLLELGRQIHGL 242
Query: 271 --EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
+ + F +++VS Y + G + A +F+ +P KN WNAM+ Y Q
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302
Query: 329 RELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAG 380
ELF+ M N ++ ++ + +G + R FD+M + +A+++
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEA 439
++G +++L + M S + ++L++C + EL ++ ++G +
Sbjct: 363 LGRAGRLQEALEVITNMPI---DPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSS 419
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV-----ISW-------NTMIAGYARHGF 487
G + +L Y G E+A A + + D+ +SW +T AG RH
Sbjct: 420 GMHI--SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEK 477
Query: 488 GKDALMLFESMKTVG 502
K+ ++E + +G
Sbjct: 478 SKE---IYEKLAELG 489
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 20/302 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D+ + ++ Y + + AR +F+ MP+R+VV+W+ M+ GYAQ G + A +F L
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 182 EK----NEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLG 233
+ N+ S++ +++ + +E + +S + +SL+ + K
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYV 289
A +F+ +PV++ WN M+ YAQ+++ + LF+ + + T+ +++
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAMTCKNVAS-WN 344
G VDE R FD M E + A V + R+ A E+ M S W
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA---GYAQSGYSEDSLRLFIEMKRYG 401
++T A D++ + +S I+ YA G ED+ + ++ G
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449
Query: 402 ER 403
E+
Sbjct: 450 EK 451
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 62/344 (18%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + + + G A +F+ MP+R+ V+++ M+ GY G+ + A
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 114 VFDQMPQRDLV----SWNVMISGYVRNKSLSAARNL------------------------ 145
+F + +L S++ +IS + L R +
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYS 263
Query: 146 -----------FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
F +P +++ WN ML YAQ+ + +F RM ++ N I++
Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLN 323
Query: 191 LLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
+L A G ++E F ES+ + SL+ + RL +A + MP+
Sbjct: 324 VLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDP 383
Query: 246 DEVSWNTMITGYA--QNNYLA--EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA---- 297
E W ++T +N LA A ++FE PV ++ + Y +G+ ++A
Sbjct: 384 TESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH-ISLSNAYAADGRFEDAAKAR 442
Query: 298 RMIFDAMPEKNT-VSW----NAMIAGYVQTKRMDMARELFEAMT 336
+++ D +K T +SW N + +R + ++E++E +
Sbjct: 443 KLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLA 486
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N + +L + A S G QLHG +VK G V N L+ Y K ++ AF
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E+ K +W+++I+ +A++ +L + M ++PDD + +C+ +
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + ++ G + + +VD+ + G + A+ + MP + + TW +
Sbjct: 134 IGRS-VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGM--- 188
Query: 585 CRLYGKTELAE 595
+YG ++ E
Sbjct: 189 --MYGYAQMGE 197
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/656 (36%), Positives = 363/656 (55%), Gaps = 61/656 (9%)
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
FD ML N L+ Y + GR+ AC +F+ VVSW +LM G ++ ++
Sbjct: 5 FDLMLS------NDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESL 58
Query: 237 WIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT-----AMVSG 287
+F +M + ++ +++T + N L + R + VK F +++
Sbjct: 59 LLFSKMGLSGVKPNDFTFSTNLKACGLLNGL-DIGRQIHDICVKTGFDMVNVVGNSIIDM 117
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------ 335
Y + G+++EA +F+ MP +N +SWNAMIAGY + A LF+ M
Sbjct: 118 YSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTF 177
Query: 336 -----TCKNVA-------------------SWNTMITG-----YAQSGEITHARNLFDRM 366
C ++ S NT + G Y + G++ AR +F +
Sbjct: 178 TSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHI 237
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ ISW A+I GYAQ G +S+ LF +++ +++ +S++ A+ A ++ GK
Sbjct: 238 EEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGK 297
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H +KV V N++L MY KCG + EA F E+ ++VISW MI GY +HG
Sbjct: 298 QMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHG 357
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
GK+A+ LF+ M+ +PDD+T + +L CSH+GLVEKG EYF + +G+ +HY
Sbjct: 358 LGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHY 417
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
CMVDLLGRAGRL EA+NL+ +MP E + W LL ACR++G EL ++ ++ ++
Sbjct: 418 ACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDS 477
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
EN YV++SN+YA +G W + ++R ++ + +KK G SW+E+ +VH F GD HP
Sbjct: 478 ENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHP 537
Query: 667 EKDRIYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL--SI 723
++I+ L+E+E ++K++ G+VY K LHDV EE K LR HSEKLA+ ++ +
Sbjct: 538 LTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGL 597
Query: 724 PAGRP-IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
GR IRV KNLRVC DCH IK +SKI+ + ++RD NRFH F G CSC DYW
Sbjct: 598 EEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 197/448 (43%), Gaps = 75/448 (16%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
++ W + H++NG +L +F+ M P + S N G LLNG LD RQ
Sbjct: 37 NVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACG-LLNG-LDIGRQ 94
Query: 114 VFDQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ D + V N +I Y + ++ A +FE+MP R+++SWN M++GY G+
Sbjct: 95 IHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGF 154
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACML--------FESKANWEVV 217
+ A +F +M E +E ++ L A G I+E + F N V
Sbjct: 155 CEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVA 214
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEA 273
+L+ +VK +L A+ +F + + +SW +I GYAQ LAE+ LF E +
Sbjct: 215 --GALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESS 272
Query: 274 PVKDVFTWTAMVSGY-----VQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDM 327
D F ++M+ + VQ GK A I +P +S N+++ Y++ ++
Sbjct: 273 IQVDGFILSSMMGVFADFALVQQGKQMHAFAI--KVPSGVDISVCNSILDMYLKCGMINE 330
Query: 328 ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQ 383
A LF M +NV SW MITGY + G A LFD M + D +++ A++ G +
Sbjct: 331 AERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSH 390
Query: 384 SGYSEDSLRLFIEMKRY-------------------GERL--------------NRSPFT 410
SG E F + Y RL N +
Sbjct: 391 SGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQ 450
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFE 438
++LS C LELGK++ G L+++ E
Sbjct: 451 TLLSACRVHGDLELGKEVGGILLRLDSE 478
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 200/451 (44%), Gaps = 61/451 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
N +I Y G+L A VFD+M +R++VSW ++ G+++N + + LF M K
Sbjct: 11 NDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVK 70
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYVQNGRIEEACML 207
+ +++T L D R+I D ++ + N ++ Y + GRI EA +
Sbjct: 71 PNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACM 130
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYL 263
FE ++SWN+++ G+ A +F +M DE ++ + + + +
Sbjct: 131 FEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAI 190
Query: 264 AEAQRLFEEAPVKDVFTWT-------AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
E ++ + F ++ A++ YV+ GK+ AR +F + EK+ +SW A+I
Sbjct: 191 KEGNQI-HAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALI 249
Query: 317 AGYVQTKRMDMARELFEAM---------------------------------------TC 337
GY Q + + ELF + +
Sbjct: 250 LGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSG 309
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+++ N+++ Y + G I A LF MP + ISW +I GY + G ++++RLF EM
Sbjct: 310 VDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEM 369
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGS 456
+ + + +VL C++ +E G++ +L G +A ++ + + G
Sbjct: 370 QLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGR 429
Query: 457 VEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++EA + + + ++ +V W T+++ HG
Sbjct: 430 LKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 19/196 (9%)
Query: 435 VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALML 494
+GF + N L+VMY KCG + A F+ ++ ++V+SW ++ G+ ++G ++L+L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG-----VIPNSKHYTCM 549
F M G+KP+D T L AC ++ G + + + G V+ NS +
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQ-IHDICVKTGFDMVNVVGNS-----I 114
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
+D+ + GR++EA + + MP + +W A++ Y EKA V+F+ E
Sbjct: 115 IDMYSKCGRINEAACMFEVMPVR-NLISWNAMIAG---YTVAGFCEKAL-VLFQKMQEVG 169
Query: 610 GM---YVLLSNLYAAS 622
G + S L A S
Sbjct: 170 GFLDEFTFTSTLKACS 185
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 371/639 (58%), Gaps = 48/639 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V N MIS Y+ G L AR +FD+MP+R+ VSW+ +ISG ++ + + FE P +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGR--IEEACM 206
+VVSW +SG+ +NG A ++F R+LE N++++ ++ A + G + + +
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 207 LFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
KA +E + NSL+ ++ + A+ +FDRM RD VSW ++ Y + L
Sbjct: 208 GLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLR 267
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE------------------ 306
EA+R+F+E P ++ +W+AM++ Y Q+G +EA +F M +
Sbjct: 268 EARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALA 327
Query: 307 ---------------------KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
K+ +++I Y + + D R +F+ + KNV WN+
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
M+ GY+ +G + LF+ +P+ + +SW IIAGY ++ E L +F + G+ N
Sbjct: 388 MVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+S F+SVL CA++ASL+ G +HG+++K+G + FVG AL MY KCG + + FE
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVE 524
+ +K+ ISW MI G A GF ++L+LFE M +T + P+++ ++ +L ACSH GLV+
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVD 567
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
KG YF SM + YG+ P KHYTC+VDLL R+GRL EA+ ++ +PF+P+A W ALL
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+ Y ++AE+ A+ ++++ N+ YVLLSN+YA++GRW DVS +R MR++G+KK
Sbjct: 628 CKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSG 687
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
G SW+EV+N+VH+F D H + + IY L+ L ++K
Sbjct: 688 GCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 246/510 (48%), Gaps = 88/510 (17%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
LL Y+ + E + + ++V N ++ +V+ L A+ +FD MP R+EVSW
Sbjct: 62 LLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSW 121
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
+ +I+G + + E+ FE P ++V +WTA +SG+V+NG EA +F + E
Sbjct: 122 SALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVR 181
Query: 308 -NTVSW-----------------------------------NAMIAGYVQTKRMDMAREL 331
N V++ N++I ++ +D+AR +
Sbjct: 182 PNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRV 241
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F+ M ++V SW ++ Y ++G++ AR +FD MP+ + ISW+A+IA Y+QSGY+E++L
Sbjct: 242 FDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEAL 301
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+LF +M + G + N S F LS A+L +L G +HG + K+G + F+G++L+ +Y
Sbjct: 302 KLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLY 361
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG----------------------- 488
CKCG ++ F+ I++K+V+ WN+M+ GY+ +G
Sbjct: 362 CKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIA 421
Query: 489 --------KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
+ L +F ++ G P+ T +L AC+ ++KG MN +I
Sbjct: 422 GYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKG------MNVHGKII 475
Query: 541 PNSKHY-----TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
Y T + D+ + G + ++ + + MP E + +W ++ ++ A
Sbjct: 476 KLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP-EKNEISWTVMIQG---LAESGFAV 531
Query: 596 KAAEVIFEMEPEN---AGMYVLLSNLYAAS 622
++ + EME + +LLS L+A S
Sbjct: 532 ESLILFEEMERTSEVAPNELMLLSVLFACS 561
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 205/450 (45%), Gaps = 89/450 (19%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD- 122
W+ I+ M+ G + ++ F P ++ VS+ A ISG++ NG A ++F ++ +
Sbjct: 121 WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGV 180
Query: 123 --------------------------------------LVSWNVMISGYVRNKSLSAARN 144
L N +I+ +R + AR
Sbjct: 181 RPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARR 240
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+F+ M KRDVVSW +L Y + G ARRIFD M E+NEISW+ ++A Y Q+G EEA
Sbjct: 241 VFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEA 300
Query: 205 CMLFESKANWE-----VVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMIT 255
LF SK E + + + + L I + +D +++I
Sbjct: 301 LKLF-SKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLID 359
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
Y + + + +F+ K+V W +MV GY NG+++E +F+ +PEKN VSW +
Sbjct: 360 LYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTI 419
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCKNVASWN-------------- 344
IAGY++ ++ + E+F + C ++AS +
Sbjct: 420 IAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGI 479
Query: 345 -------TMITG-YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
T +T YA+ G+I ++ +F+RMP+ + ISW +I G A+SG++ +SL LF E
Sbjct: 480 QYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEE 539
Query: 397 MKRYGERL-NRSPFTSVLSTCANLASLELG 425
M+R E N SVL C++ ++ G
Sbjct: 540 MERTSEVAPNELMLLSVLFACSHCGLVDKG 569
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 169/393 (43%), Gaps = 117/393 (29%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVF----NSMPRRSSVSY-------------------- 95
++ W AI+ +RNG AL +F S R + V++
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 96 ---------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
N++I+ L G++D AR+VFD+M +RD+VSW ++ YV L
Sbjct: 208 GLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLR 267
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-------------------- 180
AR +F+ MP+R+ +SW+ M++ Y+Q+GYA+ A ++F +M
Sbjct: 268 EARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALA 327
Query: 181 -------------------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
++K+ + L+ Y + G+ ++ ++F+ VV WNS
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE------EAPV 275
++GG+ RL + + +F+ +P +++VSW T+I GY +N + +F + P
Sbjct: 388 MVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 276 K---------------------------------DVFTWTAMVSGYVQNGKVDEARMIFD 302
K D+F TA+ Y + G + ++ +F+
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
MPEKN +SW MI G ++ + LFE M
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEM 540
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 120/285 (42%), Gaps = 60/285 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + I + + G D VF+ + ++ V +N+M+ GY +NG+L+ ++F+
Sbjct: 348 DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFEL 407
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKR------------------- 152
+P+++ VSW +I+GY+ N+ +F + P +
Sbjct: 408 IPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKG 467
Query: 153 --------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
D+ + YA+ G +++++F+RM EKNEISW ++ ++
Sbjct: 468 MNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAES 527
Query: 199 GRIEEACMLFESKANWEVVSWNSLM----------GGFVKQKRLGDAKWIFDRMPVRDEV 248
G E+ +LFE V+ N LM G V + W F+ M +
Sbjct: 528 GFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK-----GLWYFNSMEKVYGI 582
Query: 249 S-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSG 287
+ ++ +++ L EA+ P + + W A++SG
Sbjct: 583 KPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 117/305 (38%), Gaps = 89/305 (29%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC--------------- 454
S+L +N + G LH L+K GF + ++ LL++Y C
Sbjct: 25 VSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDG 84
Query: 455 ----------------GSVEEAYHAFEEIVDK---------------------------- 470
G++ +A F+E+ ++
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERN 144
Query: 471 ---DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG------ 521
+V+SW I+G+ R+G +AL LF + G++P+D+T ++ AC G
Sbjct: 145 PFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGM 204
Query: 522 -----LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+V+ G E++ S + NS ++ L R G +D A+ + M + D
Sbjct: 205 SILGLVVKAGFEHYLS-------VSNS-----LITLSLRMGEIDLARRVFDRME-KRDVV 251
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+W A+L A Y +T +A + EM N + + Y+ SG + K+ KM
Sbjct: 252 SWTAILDA---YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 637 DRGVK 641
G K
Sbjct: 309 QEGFK 313
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/639 (36%), Positives = 344/639 (53%), Gaps = 91/639 (14%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN------------------ 261
+L+ +VK L DA IF MP RD V+WN M+ GYA +
Sbjct: 49 TALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR 108
Query: 262 -------------YLAEAQRLFEEAPVK--------------------DVFTWTAMVSGY 288
LA+ L + V V TA++ Y
Sbjct: 109 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMY 168
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK---------- 338
+ G + AR +FDAMP +N V+W+A+I G+V RM A LF+AM +
Sbjct: 169 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 228
Query: 339 ------------------------------NVASWNTMITGYAQSGEITHARNLFDRMPQ 368
++ + N++++ YA++G I A LFD M
Sbjct: 229 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D +S++A+++GY Q+G +E++ +F +M+ + + S++ C++LA+L+ G+
Sbjct: 289 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 348
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG 488
HG ++ G + + NAL+ MY KCG ++ + F + +D++SWNTMIAGY HG G
Sbjct: 349 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 408
Query: 489 KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
K+A LF M +G PD +T + +LSACSH+GLV +G +F+ M YG+ P +HY C
Sbjct: 409 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC 468
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
MVDLL R G LDEA +++MP D W ALLGACR+Y +L +K + +I E+ PE
Sbjct: 469 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 528
Query: 609 AGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK 668
G +VLLSN+Y+A+GR+ + ++VR+ + +G KK G SW+E+ +H F GD HP+
Sbjct: 529 TGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 588
Query: 669 DRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP 728
IY L+ + +K+ G+ T VL D+ EEEKE L HSEKLA+AYGILS+ +
Sbjct: 589 PEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKT 648
Query: 729 IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
I V KNLRVC DCH IKHIS + R II+RD NRFHHF
Sbjct: 649 IFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 39/406 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY------------LLNGQ 107
D+ + +++ C A H+F +MP R V++NAM++GY LL+ Q
Sbjct: 44 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 103
Query: 108 LDPAR---------QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+ R + + Q+ ++ + Y L RN + V+
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD-GVLLGT 162
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--KANWEV 216
+L YA+ G ARR+FD M +NE++W+ L+ +V R+ +A +LF++
Sbjct: 163 ALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 222
Query: 217 VSWNSLMGGF-----VKQKRLGDA-KWIFDRMPVR-DEVSWNTMITGYAQNNYLAEAQRL 269
+S S+ + R+G+ + + V D + N++++ YA+ + +A L
Sbjct: 223 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 282
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRM 325
F+E VKD +++A+VSGYVQNG+ +EA ++F M E + + ++I +
Sbjct: 283 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 342
Query: 326 DMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
R ++ + +AS N +I YA+ G I +R +F+ MP D +SW +IAGY
Sbjct: 343 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 402
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
G +++ LF+EM G + F +LS C++ + GK
Sbjct: 403 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 448
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 142/356 (39%), Gaps = 107/356 (30%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSY--------NAMISGYLLNGQLDPARQ 113
+Q +A T + C + LH P R+S S A++ Y G L AR+
Sbjct: 125 QQGALAQGTSVHAYCIRACLH-----PNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--------------------- 152
VFD MP R+ V+W+ +I G+V ++ A LF+ M +
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 153 -------------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA 193
D+ + N++LS YA+ G D A +FD M K+ +S++ L++
Sbjct: 240 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 299
Query: 194 AYVQNGRIEEACMLFESKANWEV-------VSW--------------------------- 219
YVQNGR EEA ++F+ V VS
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 359
Query: 220 -----NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-- 272
N+L+ + K R+ ++ +F+ MP RD VSWNTMI GY + EA LF E
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMN 419
Query: 273 --APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
D T+ ++S +G V E + F M GY T RM+
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGH-----------GYGLTPRME 464
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M R+ N F L C+ LA G+ +H + G +A FV ALL MY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL--MLFESMKTVGIKPDDITMVGIL 514
+ +A H F + +D+++WN M+AGYA HG A+ +L M+ ++P+ T+V +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 515 SACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHY--------TCMVDLLGRAGRLDEAQNL 565
+ G + +GT + Y + NSK T ++D+ + G L A+ +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 566 MKNMPFEPDAATWGALLG 583
MP + TW AL+G
Sbjct: 181 FDAMPAR-NEVTWSALIG 197
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 132/321 (41%), Gaps = 77/321 (23%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N ++ + + G D A+ +F+ M + +VSY+A++SGY+ NG+ + A VF +M
Sbjct: 259 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 318
Query: 120 Q-----------------------------------RDLVS----WNVMISGYVRNKSLS 140
R L S N +I Y + +
Sbjct: 319 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 378
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
+R +F MMP RD+VSWNTM++GY +G A +F M + +++ LL+A
Sbjct: 379 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 438
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMG-GFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+G ++ E K W +MG G+ R+ + M+
Sbjct: 439 HSG------LVIEGK------HWFHVMGHGYGLTPRMEH---------------YICMVD 471
Query: 256 GYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVD----EARMIFDAMPEKNTV 310
++ +L EA + P++ DV W A++ +D +RMI + PE T
Sbjct: 472 LLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE-GTG 530
Query: 311 SWNAMIAGYVQTKRMDMAREL 331
++ + Y R D A E+
Sbjct: 531 NFVLLSNIYSAAGRFDEAAEV 551
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/744 (32%), Positives = 389/744 (52%), Gaps = 65/744 (8%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD--- 153
A+I+ Y +D A QVFD+ P ++ WN ++ +R++ A LF M
Sbjct: 171 ALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKA 230
Query: 154 ---------------------------VVSW---------NTMLSGYAQNGYADAARRIF 177
V+ + N+++S Y++N + AR F
Sbjct: 231 TDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAF 290
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQ---- 229
D + N SWN ++++Y N + A L + S ++++WNSL+ G + Q
Sbjct: 291 DSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYE 350
Query: 230 ------KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWT 282
+ L A + D + + + G N E + ++ DV+ T
Sbjct: 351 NVLTNFRSLQSAGFKPDSCSITSALQ---AVIGLGCFNLGKEIHGYIMRSKLEYDVYVCT 407
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-- 340
++V Y++N +D+A ++F KN +WN++I+GY D A +L M + +
Sbjct: 408 SLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKP 467
Query: 341 --ASWNTMITGYAQSGEITHARNLFDRMPQ----HDCISWAAIIAGYAQSGYSEDSLRLF 394
+WN++++GY+ SG A + +R+ + +SW A+I+G Q+ D+L+ F
Sbjct: 468 DLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFF 527
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+M+ + N + ++L CA + L++G+++H ++ GF ++ AL+ MY K
Sbjct: 528 SQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKG 587
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G ++ A+ F I +K + WN M+ GYA +G G++ LF+ M+ G++PD IT +L
Sbjct: 588 GKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALL 647
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
S C ++GLV G +YF SM DY + P +HY+CMVDLLG+AG LDEA + + +P + D
Sbjct: 648 SGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKAD 707
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
A+ WGA+L ACRL+ ++AE AA + +EP N+ Y L+ N+Y+ RWGDV +++
Sbjct: 708 ASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKES 767
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLV 694
M GVK +SW++V+ +H FS HPE+ IY L +L ++K+ G+V V
Sbjct: 768 MTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCV 827
Query: 695 LHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGR 754
++ + EKE +L H+EKLA+ YG++ G PIRV+KN R+C DCH K+IS R
Sbjct: 828 HQNIDDSEKEKVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLARNR 887
Query: 755 LIILRDNNRFHHFSGGSCSCGDYW 778
I LRD RFHHF G CSC D W
Sbjct: 888 EIFLRDGGRFHHFMNGECSCKDRW 911
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 224/509 (44%), Gaps = 61/509 (11%)
Query: 137 KSLSAARNL----FEMMPKRDVVSWN-TMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
++L++ R L +M KR++V+ + +M+ Y Q G ++A ++F +N + WN
Sbjct: 42 RTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSF 101
Query: 192 LAAYVQNG-----------RIEEACMLFESKANWEVVS--------W------------- 219
+ + G + + + F+SKA V+ W
Sbjct: 102 IEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRG 161
Query: 220 --------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+L+ + K + A +FD P++++ WNT++ ++ +A LF
Sbjct: 162 FHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFR 221
Query: 272 EAPVKDVFTWTAMVSGYVQN-GKV---DEARMIFDAMPE----KNTVSWNAMIAGYVQTK 323
+ +Q GK+ +E + I + NT N++++ Y +
Sbjct: 222 RMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNN 281
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCISWAAIIA 379
R+++AR F++ N ASWN++I+ YA + + A +L M + D I+W ++++
Sbjct: 282 RLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLS 341
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
G+ G E+ L F ++ G + + TS L L LGK++HG +++ E
Sbjct: 342 GHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEY 401
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
+V +L+ Y K +++A F +K++ +WN++I+GY G +A L MK
Sbjct: 402 DVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMK 461
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
GIKPD +T ++S S +G E+ + + G+ PN +T M+ +
Sbjct: 462 EEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRI-KSLGLTPNVVSWTAMISGCCQNENY 520
Query: 560 DEAQNLMKNMPFE---PDAATWGALLGAC 585
+A M E P++ T LL AC
Sbjct: 521 MDALQFFSQMQEENVKPNSTTICTLLRAC 549
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 178/382 (46%), Gaps = 28/382 (7%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----Q 120
N ++ + RN + A F+S +S S+N++IS Y +N L+ A + +M +
Sbjct: 271 NSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVK 330
Query: 121 RDLVSWNVMISGYVRNKS----LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
D+++WN ++SG++ S L+ R+L K D S + L G + + I
Sbjct: 331 PDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEI 390
Query: 177 FDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
+ LE + L+ Y++N +++A ++F N + +WNSL+ G+ +
Sbjct: 391 HGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLF 450
Query: 233 GDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAM 284
+A+ + ++M D V+WN++++GY+ + EA R+ +V +WTAM
Sbjct: 451 DNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAM 510
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC------- 337
+SG QN +A F M E+N + I ++ ++ E + C
Sbjct: 511 ISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGF 570
Query: 338 -KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
++ +I Y + G++ A +F + + W ++ GYA G+ E+ LF E
Sbjct: 571 LDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDE 630
Query: 397 MKRYGERLNRSPFTSVLSTCAN 418
M++ G R + FT++LS C N
Sbjct: 631 MRKTGVRPDAITFTALLSGCKN 652
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/484 (19%), Positives = 197/484 (40%), Gaps = 72/484 (14%)
Query: 1 MRGNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
++ +LR L+ +H + R+ + + N S + L +R D +
Sbjct: 239 LQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRL-ELARVAFDSTEDHN 297
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVFD 116
WN I+++ N C + A + M + +++N+++SG+LL G + F
Sbjct: 298 SASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFR 357
Query: 117 QMP---------------------------------------QRDLVSWNVMISGYVRNK 137
+ + D+ ++ Y++N
Sbjct: 358 SLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKND 417
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLA 193
L A +F +++ +WN+++SGY G D A ++ ++M E+ + ++WN L++
Sbjct: 418 CLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVS 477
Query: 194 AYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR---- 245
Y +GR EEA + + VVSW +++ G + + DA F +M
Sbjct: 478 GYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKP 537
Query: 246 DEVSWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
+ + T++ A ++ L + + + D++ TA++ Y + GK+ A +F
Sbjct: 538 NSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVF 597
Query: 302 DAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEIT 357
+ EK WN M+ GY + LF+ M V ++ +++G SG +
Sbjct: 598 RNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVM 657
Query: 358 HARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
FD M I+ ++ ++ ++G+ +++L + ++ + S + +V
Sbjct: 658 DGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDF---IHAVPQKADASIWGAV 714
Query: 413 LSTC 416
L+ C
Sbjct: 715 LAAC 718
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 31/377 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
++D+ + +++N C D A VF+ ++ ++N++ISGY G D A ++ +Q
Sbjct: 400 EYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQ 459
Query: 118 MPQR----DLVSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
M + DLV+WN ++SGY + ++L+ + + +VVSW M+SG QN
Sbjct: 460 MKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNEN 519
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNG--RIEEACMLFESKANW--EVVSWNS 221
A + F +M E+ N + LL A + +I E F + + ++ +
Sbjct: 520 YMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATA 579
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKD 277
L+ + K +L A +F + + WN M+ GYA + E LF+E D
Sbjct: 580 LIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPD 639
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
T+TA++SG +G V + FD+M ++ ++ M+ + +D A +
Sbjct: 640 AITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFI 699
Query: 333 EAMTCKNVAS-WNTMITGYAQSGEI----THARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
A+ K AS W ++ +I ARNL R+ ++ ++A ++ Y+
Sbjct: 700 HAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLL-RLEPYNSANYALMMNIYSTFDRW 758
Query: 388 EDSLRLFIEMKRYGERL 404
D RL M G ++
Sbjct: 759 GDVERLKESMTALGVKI 775
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/553 (39%), Positives = 331/553 (59%), Gaps = 12/553 (2%)
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGY----- 288
IF+++ + +N +I GY L E+ + +E V FT+TA+
Sbjct: 102 IFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMD 161
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMIT 348
V G+ + I ++ N+MI Y++ ++ R++F+ M ++V SW +I+
Sbjct: 162 VGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELIS 221
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
Y +SG + A LFD +P D ++W +++G+AQ+ +++ F +M+ +G +
Sbjct: 222 AYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEIT 281
Query: 409 FTSVLSTCANLASLELGKQLH--GQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
V+S CA L + + + + + G + VG+AL+ MY KCGSV +AY F+
Sbjct: 282 LIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQG 341
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ +++V S+++MI G+A HG DA+ LF+ M IKP+ +T +G+L+ACSH G+VE+G
Sbjct: 342 MKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQG 401
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ F M + YG+ P++ HYTCMVDLLGRAGRL EA L+K MP EP WGALLGACR
Sbjct: 402 WQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACR 461
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++ ++A AA +FE+EP G Y+LL+N+YA+ GRW DVS VR MR RG++K +
Sbjct: 462 IHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAF 521
Query: 647 SWLEVQNK-VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
SW+E + VH F GD HP I LE+L +L+ G+ V +DV +E+K
Sbjct: 522 SWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRR 581
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
+L HSEKLA+A+G++S G IR++KNLR+CEDCH+ I S+I GR II+RD RFH
Sbjct: 582 ILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFH 641
Query: 766 HFSGGSCSCGDYW 778
HF G CSCG++W
Sbjct: 642 HFHDGICSCGNFW 654
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 167/335 (49%), Gaps = 27/335 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N+MI Y+ G L+ R+VFD+MP RD++SW +IS YV++ ++ +A LF+ +P +D+V
Sbjct: 186 NSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMV 245
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGR------IEEAC 205
+W M+SG+AQN A F++M +E +EI+ G+++A Q G I +
Sbjct: 246 AWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVA 305
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
E VV ++L+ + K +GDA +F M R+ S+++MI G+A + + +
Sbjct: 306 EKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHD 365
Query: 266 AQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMI 316
A +LF+E ++ T+ +++ G V++ IF+ M + + + M+
Sbjct: 366 AMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMV 425
Query: 317 AGYVQTKRMDMARELFEAMTCK-NVASWNTMITG--YAQSGEIT--HARNLFDRMPQHDC 371
+ R+ A EL + M + + W ++ +S +I A +LF+ P C
Sbjct: 426 DLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPY--C 483
Query: 372 ISWAAIIAG-YAQSGYSEDSLRLFIEMKRYGERLN 405
I ++A YA G D + M+ G R N
Sbjct: 484 IGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKN 518
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 59/346 (17%)
Query: 81 LHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ-------------------- 120
L +FN + + YNA+I GYL+ +L + + + M +
Sbjct: 100 LSIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAK 159
Query: 121 --------------------RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
DL N MI Y++ L R +F+ MP RDV+SW +
Sbjct: 160 MDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTEL 219
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
+S Y ++G ++A +FD + K+ ++W +++ + QN + EA M FE + V +
Sbjct: 220 ISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDE 279
Query: 221 -SLMGGFVKQKRLGDAK---WIFDRMPVRDEVSWNTMITG------YAQNNYLAEAQRLF 270
+L+G +LG AK WI D + ++++ G Y++ + +A R+F
Sbjct: 280 ITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVF 339
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMD 326
+ ++V+++++M+ G+ +G+V +A +FD M + N V++ ++ ++
Sbjct: 340 QGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVE 399
Query: 327 MARELFEAM-TCKNVAS----WNTMITGYAQSGEITHARNLFDRMP 367
++FE M C + + M+ ++G + A L MP
Sbjct: 400 QGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMP 445
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 28/293 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I +++ G + VF+ MP R +S+ +IS Y+ +G ++ A ++FD +P
Sbjct: 181 DLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLP 240
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARR 175
+D+V+W VM+SG+ +N A FE M + D ++ ++S AQ G A A
Sbjct: 241 VKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADW 300
Query: 176 IFDRMLEKNE-------ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
I D + EK+E + + L+ Y + G + +A +F+ V S++S++ GF
Sbjct: 301 IRD-VAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAM 359
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEE-------APVK 276
R+ DA +FD M V+ E+ N ++T + + + ++FE P
Sbjct: 360 HGRVHDAMKLFDEM-VKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSA 418
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMA 328
D +T MV + G++ EA + MP E + W A++ K D+A
Sbjct: 419 D--HYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIA 469
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 71/334 (21%)
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
++F+++ + + A+I GY ++S + M++ G FT++ C
Sbjct: 101 SIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKM 160
Query: 421 SLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS----- 474
+ LG+Q+HGQ + V GF VGN+++ MY KCG +E F+E+ ++DVIS
Sbjct: 161 DVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELI 220
Query: 475 --------------------------WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
W M++G+A++ ++A+M FE M+ G++ D+I
Sbjct: 221 SAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEI 280
Query: 509 TMVGILSACSHTGL---------VEKGTEY--------------FY----SMNRDYGVIP 541
T++G++SAC+ G V + +E+ Y S+ Y V
Sbjct: 281 TLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQ 340
Query: 542 NSKH-----YTCMVDLLGRAGRLDEAQNLMKNM---PFEPDAATWGALLGACRLYGKTEL 593
K Y+ M+ GR+ +A L M +P+ T+ +L AC G E
Sbjct: 341 GMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQ 400
Query: 594 AEKAAEVI---FEMEPENAGMYVLLSNLYAASGR 624
+ E++ + ++P +A Y + +L +GR
Sbjct: 401 GWQIFELMEKCYGIKP-SADHYTCMVDLLGRAGR 433
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 96/237 (40%), Gaps = 9/237 (3%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY--HAF 464
S + L C NL + KQ+H +++ G + C+V L+ K + Y F
Sbjct: 47 SQIVTTLDGCKNLTQI---KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIF 103
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
++ + +N +I GY K++ + M+ G+ P T + AC V
Sbjct: 104 NQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVG 163
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + G + M+D+ + G L+ + + MP D +W L+ A
Sbjct: 164 LGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMP-NRDVISWTELISA 222
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
Y K+ E A E+ + ++ + ++ + +A + + + KM++ GV+
Sbjct: 223 ---YVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVE 276
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/455 (46%), Positives = 298/455 (65%), Gaps = 6/455 (1%)
Query: 325 MDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+++A +LF+ M K+ + +TMIT Y +S A +F+ MP+ D ++W ++I G+A +
Sbjct: 31 LNLACKLFDEMPHKDTVTLDTMITAYFES-----AYKVFELMPEKDIVAWNSVINGFALN 85
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G ++L L+ M G + S+LS CA LA+L LG++ H +VKVG
Sbjct: 86 GKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHAN 145
Query: 445 NALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
NALL +Y KCG++ EA F+E+ ++++V+SW ++I G A +GFGK+AL F+ M+ G+
Sbjct: 146 NALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGL 205
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
P +IT VG+L ACSH G+V +G EYF M Y ++P +HY CMVDLLGRAG L EA
Sbjct: 206 VPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAY 265
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ +++MP +P+A W LLGAC ++G L A + ++EP+++G YVLLSNLYA+
Sbjct: 266 DYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLSNLYASEQ 325
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW DV +VR M GV+K GYS +E+ N VH F +GD HP+ + IY L E+ KLK
Sbjct: 326 RWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQSEAIYKMLVEMAMKLK 385
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
G+V T VL D+ EEEKE L YHSEK+A+A+ +++ G PIR++KNLRVC DCH
Sbjct: 386 LAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRIIKNLRVCADCHF 445
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK ISK+ R I++RD +RFHHF GSCSC DYW
Sbjct: 446 AIKLISKVFERDIVVRDCSRFHHFRDGSCSCRDYW 480
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 161/353 (45%), Gaps = 39/353 (11%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G L+ A ++FD+MP +D V+ + MI+ Y +A +FE+MP++D+V+WN++++G+A
Sbjct: 29 GDLNLACKLFDEMPHKDTVTLDTMITAY-----FESAYKVFELMPEKDIVAWNSVINGFA 83
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW------ 219
NG + A ++ RM + + +G + + E A ++ +A+ +V
Sbjct: 84 LNGKPNEALTLYKRMGSEG-VEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNL 142
Query: 220 ---NSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFE---- 271
N+L+ + K + +A+ IFD M + R+ VSW ++I G A N + EA F+
Sbjct: 143 HANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMER 202
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMD 326
E V T+ ++ G V+E F M E+ + + M+ + +
Sbjct: 203 EGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLK 262
Query: 327 MARELFEAMTCK-NVASWNTM-----ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
A + + M + N W T+ I G+ G AR L ++ D + +
Sbjct: 263 EAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLL--QLEPKDSGDYVLLSNL 320
Query: 381 YAQSGYSEDSLRLFIEMKR--YGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
YA SE E++R E + ++P S++ ++ +G + H Q
Sbjct: 321 YA----SEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQ 369
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A +F+ MP + +V+ + MI+ Y + A +VF+ MP++D+V+WN +I+G+ N
Sbjct: 34 ACKLFDEMPHKDTVTLDTMITAYF-----ESAYKVFELMPEKDIVAWNSVINGFALNGKP 88
Query: 140 SAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGL 191
+ A L++ M V + ++LS A+ RR M L KN + N L
Sbjct: 89 NEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHANNAL 148
Query: 192 LAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRD 246
L Y + G I EA +F E VVSW SL+ G +A F M V
Sbjct: 149 LDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPS 208
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAP-----VKDVFTWTAMVSGYVQNGKVDEARMIF 301
E+++ ++ + + E F+ V + + MV + G + EA
Sbjct: 209 EITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYI 268
Query: 302 DAMP-EKNTVSWNAMIAG 318
MP + N V W ++
Sbjct: 269 QDMPLQPNAVIWRTLLGA 286
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 32/207 (15%)
Query: 429 HGQLVKVGFEAGCFVGNALLVMYCKC--GSVEEAYHAFEEIVDKDVISWNTMIA------ 480
H Q VK G + +V N +L Y KC G + A F+E+ KD ++ +TMI
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYFESA 60
Query: 481 --------------------GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
G+A +G +AL L++ M + G++PD TMV +LSAC+
Sbjct: 61 YKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAEL 120
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
+ G M + G+ N ++DL + G + EA+ + M E + +W +
Sbjct: 121 ATLVLGRRAHVYMVK-VGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTS 179
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPE 607
L+ + G ++A E +ME E
Sbjct: 180 LIVGLAVNG---FGKEALEHFKDMERE 203
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/618 (38%), Positives = 333/618 (53%), Gaps = 59/618 (9%)
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
YA +G D + + R + I + + A+ G A +L
Sbjct: 332 AYAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPAL---------------AL 376
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ + Q L A + +P +S + GYA F+ A D + T
Sbjct: 377 LSDMLAQGLLPTAHTLSASLPACRGLSPGRALHGYA-----------FKLALAGDSYVAT 425
Query: 283 AMVSGYVQNGKVDEARMIFDAM-PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
A++ Y + G AR +FD M P+ + VS AM +TC
Sbjct: 426 ALLGMYARAGDATAARALFDDMLPDPHVVSVTAM-------------------LTC---- 462
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
YA G + AR+LFD +P D + W A+I GY Q G ++LRLF M G
Sbjct: 463 --------YADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSG 514
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEA 460
+ VLS A L ++E GK LH + + VG AL+ MYCKCGS+ +A
Sbjct: 515 VEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDA 574
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F I DKD++ WN MI GYA HG + AL +F + G+ P DIT +G+L+ACSH+
Sbjct: 575 VDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHS 634
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
G+VE+G E+F SM R+YG+ P +HY CMVDLLGRAG + EA L+++M PDA W +
Sbjct: 635 GMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVS 694
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
LL ACRL+ L ++ A+ + N+GMY+LLSN+YAA G WG+V++VR M+ G+
Sbjct: 695 LLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGI 754
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGE 700
+K G S +E+ +V+ F GD HP D IY L+++ +K+ G V T+LVLHD+ E
Sbjct: 755 QKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDE 814
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
KE L HSEKLA+A+G++S G I+++KNLR C DCH +K IS+I GR I+ RD
Sbjct: 815 ATKEKALAVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRD 874
Query: 761 NNRFHHFSGGSCSCGDYW 778
NRFHHF GSCSCGDYW
Sbjct: 875 RNRFHHFVDGSCSCGDYW 892
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 14/223 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQM-PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
A++ Y G AR +FD M P +VS M++ Y +L AR+LF+ +P +D
Sbjct: 425 TALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDF 484
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEACMLFES 210
V WN M+ GY Q+G + A R+F RML E +E++ +L+A Q G +E L
Sbjct: 485 VCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSY 544
Query: 211 KANWEVVSWN-----SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
N V + +L+ + K LGDA +F + +D V WN MI GYA + +
Sbjct: 545 VKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRK 604
Query: 266 AQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
A +F ++ + + T+ +++ +G V+E R F +M
Sbjct: 605 ALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSM 647
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 174/402 (43%), Gaps = 55/402 (13%)
Query: 74 NGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
+G D +L + +++ Y + I + G PA + D+++ ++ + +
Sbjct: 336 SGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLS-----DMLAQGLLPTAH 390
Query: 134 VRNKSLSAARNL----------FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML-E 182
+ SL A R L F++ D +L YA+ G A AAR +FD ML +
Sbjct: 391 TLSASLPACRGLSPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPD 450
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+ +S +L Y G +++A LF+ + V WN+++ G+ + R +A +F RM
Sbjct: 451 PHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRM 510
Query: 243 ------PVRDEVSWNTMITGYAQ----------NNYLAEAQRLFEEAPVKDVFTWTAMVS 286
P DEV+ +++ AQ ++Y+ ++R+ V TA++
Sbjct: 511 LGSGVEP--DEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVG-----TALID 563
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
Y + G + +A +F + +K+ V WNAMI GY A E+F + + W T
Sbjct: 564 MYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMF--VQSREQGLWPTD 621
Query: 347 IT------GYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFI 395
IT + SG + R F M + I + ++ ++G +++ L
Sbjct: 622 ITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQ 681
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
MK + + + S+L+ C ++ LG+Q+ LV G
Sbjct: 682 SMKITPDAVM---WVSLLAACRLHKNMSLGQQIADYLVAKGL 720
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 44/187 (23%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDL 123
+T + G D A +F+ +P + V +NAMI GY +G+ + A ++F +M + D
Sbjct: 460 LTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDE 519
Query: 124 VSWNVMISG---------------YVRNK---------------------SLSAARNLFE 147
V+ +++S YV+N SL A ++F
Sbjct: 520 VTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFH 579
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEE 203
+ +D+V WN M++GYA +G + A +F + E+ +I++ GLL A +G +EE
Sbjct: 580 GIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEE 639
Query: 204 ACMLFES 210
F+S
Sbjct: 640 GREFFQS 646
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/546 (39%), Positives = 327/546 (59%), Gaps = 32/546 (5%)
Query: 253 MITGYAQNNYLAEAQRLFEE--APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
+I+ Y + + + A+++FEE K + A+VSGYV N K +A ++F M E+
Sbjct: 81 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVP 140
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCK--------NVASWNTMITGYAQSGEITHARNL 362
+ + G + + EL ++ C +V+ N IT Y + G + +A+ L
Sbjct: 141 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 200
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
FD MP ISW A+++GYAQ+G + + L L+ M G + VLS+CANL +
Sbjct: 201 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 260
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+G ++ ++ GF + F+ NAL+ MY +CG++ +A F+ + ++ ++SW +I GY
Sbjct: 261 SVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 320
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
HG G+ A+ LF+ M GI+PD V +LSACSH GL ++G EYF M R+Y + P
Sbjct: 321 GMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPG 380
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+HY+CMVDLLGRAGRL EAQ L+++MP +PD A WGALLGAC+++ ELAE A E +
Sbjct: 381 PEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI 440
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGD 662
E+EPEN G YVLLSN+Y+ + V ++R+ M+++ +KK G S++E++ +VH F VGD
Sbjct: 441 ELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGD 500
Query: 663 TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH----------MLRYHSE 712
H + D IY LEELE +++ + G+ EK++ + HSE
Sbjct: 501 RNHLQSDEIYRVLEELE------------AIIMQEFGKPEKDNREESNKDGFTRVGVHSE 548
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLAVA+G+L+ G + ++KNLR+CEDCH K +SKIV R + +RD RFHHF GSC
Sbjct: 549 KLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSC 608
Query: 773 SCGDYW 778
SC DYW
Sbjct: 609 SCKDYW 614
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 13/257 (5%)
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV 449
+L L+ +M R+G+R N F L +CA L+ LG Q HGQ+ KVG FV L+
Sbjct: 24 ALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLIS 83
Query: 450 MYCKCGSVEEAYHAFEEIVD--KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
MYCK V+ A FEE K + +N +++GY + DA++LF M G+ +
Sbjct: 84 MYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNS 143
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T++G++ AC +E G+ S + YG + C + + + G ++ AQ L
Sbjct: 144 VTLLGLIPACVSPINLELGSSLHCSTLK-YGFDSDVSVVNCFITMYMKCGSVNYAQKLFD 202
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLSNLYAAS 622
MP + +W A++ Y + LA E+ M+ P+ + +LS+ A
Sbjct: 203 EMPVK-GLISWNAMVSG---YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSC-ANL 257
Query: 623 GRWGDVSKVRLKMRDRG 639
G +V KM+ G
Sbjct: 258 GAQSVGHEVEFKMQASG 274
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 182/426 (42%), Gaps = 64/426 (15%)
Query: 68 ITTHMRNGCCDSALHVF--NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR---- 121
I+ + + D+A VF N R+ +V YNA++SGY+ N + A +F QM +
Sbjct: 82 ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPV 141
Query: 122 -----------------------------------DLVSWNVMISGYVRNKSLSAARNLF 146
D+ N I+ Y++ S++ A+ LF
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 201
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIE 202
+ MP + ++SWN M+SGYAQNG A ++ M + + ++ G+L++ G
Sbjct: 202 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 261
Query: 203 EACML-FESKANWEVVSW---NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
+ F+ +A+ + N+L+ + + L A+ +FD MP R VSW +I GY
Sbjct: 262 VGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG 321
Query: 259 QNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNT 309
+ + A +LF+E D + ++S G D+ F M E
Sbjct: 322 MHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGP 381
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMP- 367
++ M+ + R+ A+ L E+M K + A W ++ + A F+R+
Sbjct: 382 EHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE 441
Query: 368 -QHDCISWAAIIAG-YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
+ + I + +++ Y+ + S+ LR+ I MK ++L + P S + + +G
Sbjct: 442 LEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKE--KKLKKDPGCSYVELKGRVHPFIVG 499
Query: 426 KQLHGQ 431
+ H Q
Sbjct: 500 DRNHLQ 505
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 49/263 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ N IT +M+ G + A +F+ MP + +S+NAM+SGY NG +++
Sbjct: 175 DSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRN 234
Query: 118 MPQR----DLVSW-----------------------------------NVMISGYVRNKS 138
M D V+ N +I+ Y R +
Sbjct: 235 MDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGN 294
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L+ A+ +F+ MP+R +VSW ++ GY +G+ + A ++F M +E + ++ +L+A
Sbjct: 295 LTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSA 354
Query: 195 YVQNGRIEEACMLFE-SKANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G ++ F+ K N+++ ++ ++ + RL +A+ + + MP++ D
Sbjct: 355 CSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGA 414
Query: 249 SWNTMITGYAQNNYLAEAQRLFE 271
W ++ + + A+ FE
Sbjct: 415 VWGALLGACKIHKNVELAELAFE 437
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/664 (36%), Positives = 353/664 (53%), Gaps = 60/664 (9%)
Query: 139 LSAARNLFEM--MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
LS A LF + P R S+N ++ + + G+ + A +F ML+ +S + A
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
C L + G + F R + D+ N++I
Sbjct: 178 VKS-CSRMCDLSVGR---------------------GVQAYAFKRGFMVDQFVLNSLIHM 215
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE---------- 306
YA + A LF VK V W AM++GYV+NG E +F M E
Sbjct: 216 YASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTL 275
Query: 307 ------------KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSG 354
N W IA Y + K M +R L A+ + YA+ G
Sbjct: 276 LSVATACGRLGDANLGQW---IAEYAEEKGMLRSRNLATAL-----------VDMYAKCG 321
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
E+ AR LFDRM D ++W+A+I+GY QS ++L +F EM+ N SVLS
Sbjct: 322 ELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLS 381
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA L +LE GK +H + + +G AL+ Y KCG +++A AFE + ++ +
Sbjct: 382 ACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWT 441
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W +I G A +G ++AL LF SM I+P D+T +G+L ACSH LVE+G +F SM
Sbjct: 442 WTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMT 501
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+DYG+ P +HY CMVDLLGRAG +DEA ++NMP EP+A W ALL AC ++ E+
Sbjct: 502 QDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIG 561
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
E+A + I ++P ++G Y+LLSN YA+ G+W + + VR +M+++GV+K+ G S +E++
Sbjct: 562 EEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGT 621
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
+ F D+ HP+ IY + E+ +K G++ +T DV E EK+ + +HSEKL
Sbjct: 622 IFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKL 681
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+G++ G IR+ KNLRVC DCH+A K ISK+ R II+RD NRFHHF G CSC
Sbjct: 682 AIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSC 741
Query: 775 GDYW 778
DYW
Sbjct: 742 NDYW 745
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 202/444 (45%), Gaps = 48/444 (10%)
Query: 88 PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNV-MISGYVRNKS----LSAA 142
P RS+ SYN +I +L G + A +F +M VS + ++ V++ S LS
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 143 RNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
R + KR D N+++ YA G AA +F + K I+WN ++A YV+N
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 199 GRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDA---KWIF----DRMPVRDE 247
G +E +F E +A ++ V +L+ RLGDA +WI ++ +R
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEV---TLLSVATACGRLGDANLGQWIAEYAEEKGMLRSR 307
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-- 305
++ YA+ L +A+RLF+ +DV W+AM+SGY Q+ + EA IF+ M
Sbjct: 308 NLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT 367
Query: 306 --EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----VASWNTMITGYAQSGEITHA 359
N V+ ++++ ++ + + + K+ V ++ YA+ G I A
Sbjct: 368 EVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDA 427
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F+ MP + +W A+I G A +G S ++L LF M F VL C++
Sbjct: 428 VKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHG 487
Query: 420 ASLELGK-------QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKD 471
+E G+ Q +G ++ GC V + + G ++EAY + ++ +
Sbjct: 488 CLVEEGRRHFTSMTQDYGICPRIE-HYGCMVD-----LLGRAGLIDEAYQFIRNMPIEPN 541
Query: 472 VISWNTMIAGYARHG---FGKDAL 492
+ W +++ H G++AL
Sbjct: 542 AVVWRALLSACTVHKNVEIGEEAL 565
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 160/359 (44%), Gaps = 50/359 (13%)
Query: 61 IRQWNVAITTHMRNGCCDS-ALHV-FNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
+ Q+ + HM C D A HV F+++ + +++NAMI+GY+ NG ++F M
Sbjct: 204 VDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGM 263
Query: 119 -----PQRDLVSWNVM--------------ISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
P ++ +V I+ Y K + +RNL
Sbjct: 264 LEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA-----------TA 312
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV--- 216
++ YA+ G D ARR+FDRM ++ ++W+ +++ Y Q+ R EA +F EV
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPN 372
Query: 217 -VSWNSLMGGFVKQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNYLAEAQRLFE 271
V+ S++ L KW+ + +D + ++ YA+ + +A + FE
Sbjct: 373 DVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFE 432
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDM 327
PV++ +TWTA++ G NG+ EA +F +M E N V++ ++ ++
Sbjct: 433 SMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEE 492
Query: 328 ARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
R F +MT C + + M+ ++G I A MP + + + W A+++
Sbjct: 493 GRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSA 551
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV 134
GC A+ F SMP R++ ++ A+I G NG+ A ++F M + ++ +V G +
Sbjct: 422 GCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVL 481
Query: 135 RNKS----LSAARNLFEMMPK-----RDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKN 184
S + R F M + + + M+ + G D A + M +E N
Sbjct: 482 LACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPN 541
Query: 185 EISWNGLLAAYVQNGRIE 202
+ W LL+A + +E
Sbjct: 542 AVVWRALLSACTVHKNVE 559
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/471 (43%), Positives = 299/471 (63%), Gaps = 3/471 (0%)
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCK---NVASWNTMITGYAQSGEITHARNLFDRMP 367
S+NA++A Y+ R D+A LF + + +V SW TM+ G + G + AR LFD MP
Sbjct: 129 SFNALLAAYLANGRADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLGLVDDARKLFDGMP 188
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ + ISW A+I+GY ++G D+L +F +M+ G N S + C L G++
Sbjct: 189 ERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGRE 248
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
+H + + G + A++ MYCKCGSVEEA+H F+ + K + SWN MI G A HG
Sbjct: 249 VHRWVEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGR 308
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
KDA+ LF M+ + PDD+T+V +L+AC+HTG+V G YF + + YG+ P +HY
Sbjct: 309 CKDAIELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYG 368
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
CMVDL GRAG LDEA+ ++ +MP EPD GAL GAC+++ +L E + E++P+
Sbjct: 369 CMVDLFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGWRVIELDPQ 428
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
N+G YVLL+NL A++G+W DV+KVR M +R V K G S +E+ +V F G H +
Sbjct: 429 NSGRYVLLANLLASAGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEVCEFQCGSLCHAQ 488
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
+ I+A ++++ K++ +G++ T VLHD+ EEEKE L+YHSEKLA+A+G+L G
Sbjct: 489 EKEIFAAVKDMMRKIRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRPGD 548
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+R+ KNLRVC DCH A K IS++ R I++RD NRFHHF G+CSC DYW
Sbjct: 549 TVRITKNLRVCRDCHEATKFISRVFEREIVVRDRNRFHHFKDGTCSCRDYW 599
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 121/280 (43%), Gaps = 57/280 (20%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
S+NA+++ YL NG+ D A ++F S S+ +L D
Sbjct: 129 SFNALLAAYLANGRADLASRLF---------------------GSCSSPGDL-------D 160
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
VVSW TM+ G + G D AR++FD M E+N ISWN +++ YV+ GR +A +F+
Sbjct: 161 VVSWTTMVGGLCRLGLVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMRA 220
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
+ GFV S TG E R E++
Sbjct: 221 LGIEG-----NGFVA-------------------ASAVVACTGAGVLARGREVHRWVEQS 256
Query: 274 PVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
+ D TA+V Y + G V+EA +F +P K SWN MI G R A ELF
Sbjct: 257 GITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELF 316
Query: 333 EAMTCKNVASWNT----MITGYAQSGEITHARNLFDRMPQ 368
M ++VA + ++T A +G ++ N F+ + Q
Sbjct: 317 HEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQ 356
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 129/318 (40%), Gaps = 39/318 (12%)
Query: 16 LHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNG 75
H H S N L + N + L S+ GD D+ W + R G
Sbjct: 123 FHSHAHSFNALLAAYLANG-------RADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLG 175
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR 135
D A +F+ MP R+ +S+NAMISGY+ G+ A +VFDQM + + +G+V
Sbjct: 176 LVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMR-----ALGIEGNGFVA 230
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAY 195
++ A + R+V W Q+G + +E ++ Y
Sbjct: 231 ASAVVACTGAGVLARGREVHRW------VEQSG------------ITMDEKLATAVVDMY 272
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWN 251
+ G +EEA +F+ + SWN ++GG R DA +F M D+V+
Sbjct: 273 CKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMEREDVAPDDVTLV 332
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++T A +++ F + + + MV + + G +DEA+ + D MP
Sbjct: 333 NVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPM 392
Query: 307 KNTVSWNAMIAGYVQTKR 324
+ + + G + R
Sbjct: 393 EPDIGVLGALFGACKIHR 410
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/619 (37%), Positives = 344/619 (55%), Gaps = 56/619 (9%)
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGR---IEEACMLFESKANWEVVSWNSLMGGFV 227
D AR +F +M E N WN +L + EA MLF + L G V
Sbjct: 69 DYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAM----------LCDGRV 118
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL--------FEEAPVKDVF 279
K R ++ +++ A+ + L E +++ F E D F
Sbjct: 119 KPNRF----------------TFPSVLKACARASRLREGKQIHGLIVKFGFHE----DEF 158
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
+ +V YV +++A +F KN V ++ + ++ D N
Sbjct: 159 VISNLVRMYVMCAVMEDAYSLFC----KNVVDFDGSCQMELDKRKQD-----------GN 203
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
V WN MI G + G+I A+NLFD MP +SW +I+GYAQ+G+ +++ LF EM+
Sbjct: 204 VVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQS 263
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
N SVL A + +LELGK +H K E +G+AL+ MY KCGS+++
Sbjct: 264 SNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDK 323
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A FE + ++ I+W+ +I +A HG +DA++ F M G+ P+D+ +GILSACSH
Sbjct: 324 ALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSH 383
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
GLVE+G +F M + G+ P +HY CMVDLLGRAG L+EA+ L++NMP EPD W
Sbjct: 384 AGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWK 443
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
ALLGAC+++ ++ E+ AE + E+ P ++G YV LSNLYA+ G W V++VRLKM+
Sbjct: 444 ALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMD 503
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
++K G SW+E+ +H F V D H + I A L E+ KL+ +G+ +T V +
Sbjct: 504 IRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTD 563
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
E+E+ L+YHSEK+AVA+G++S P++++KNLR+CEDCH ++K IS I R II+R
Sbjct: 564 EQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVR 623
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D RFH F GSCSC DYW
Sbjct: 624 DRKRFHQFEHGSCSCMDYW 642
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 53/293 (18%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSG---YSEDSLRLFIEMKRYGE-RLNRSP 408
S +I +AR +F +MP+ +C W I+ A++ ++L LF M G + NR
Sbjct: 65 SRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFT 124
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY------- 461
F SVL CA + L GKQ+HG +VK GF FV + L+ MY C +E+AY
Sbjct: 125 FPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNV 184
Query: 462 ----------------------------------------HAFEEIVDKDVISWNTMIAG 481
+ F+E+ + V+SWN MI+G
Sbjct: 185 VDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISG 244
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA++G +A+ LF+ M++ I P+ +T+V +L A + G +E G ++ + V
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKNKVEI 303
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+ + +VD+ + G +D+A + + +P + +A TW A++GA ++G+ E A
Sbjct: 304 DDVLGSALVDMYSKCGSIDKALQVFETLP-KRNAITWSAIIGAFAMHGRAEDA 355
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 177/421 (42%), Gaps = 79/421 (18%)
Query: 108 LDPARQVFDQMPQRDLVSWNVM--ISGYVRNKSL-SAARNLFEMM-----PKRDVVSWNT 159
+D AR VF QMP+ + WN + I ++ L S A LF M K + ++ +
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127
Query: 160 MLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLF------- 208
+L A+ ++I +++ ++E + L+ YV +E+A LF
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187
Query: 209 ---------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
+ K + VV WN ++ G V+ + AK +FD MP R VSWN MI+GYAQ
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQ 247
Query: 260 NNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVS 311
N + EA LF+E ++ T +++ + G ++ + I E + V
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVL 307
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+A++ Y + +D A ++FE + +N +W+ +I +A G
Sbjct: 308 GSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGR---------------- 351
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+ED++ F M + G N + +LS C++ +E G+
Sbjct: 352 ---------------AEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSH 396
Query: 432 LVK-VGFEA-----GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYAR 484
+VK VG + GC V + + G +EEA + ++ D + W ++
Sbjct: 397 MVKVVGLQPRIEHYGCMVD-----LLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKM 451
Query: 485 H 485
H
Sbjct: 452 H 452
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 20/262 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N MI G + G + A+ +FD+MP R +VSWNVMISGY +N A NLF+ M
Sbjct: 205 VLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSS 264
Query: 153 DV----VSWNTMLSGYAQNGYADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEA 204
++ V+ ++L A+ G + + I +E +++ + L+ Y + G I++A
Sbjct: 265 NIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKA 324
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQN 260
+FE+ ++W++++G F R DA F M ++V++ +++ +
Sbjct: 325 LQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHA 384
Query: 261 NYLAEAQRLFEEAPVKDVFT------WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWN 313
+ E + F VK V + MV + G ++EA + MP E + V W
Sbjct: 385 GLVEEGRSFFSHM-VKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWK 443
Query: 314 AMIAGYVQTKRMDMARELFEAM 335
A++ K + M + E +
Sbjct: 444 ALLGACKMHKNLKMGERVAETL 465
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 54/288 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ WN+ I +R G SA ++F+ MP RS VS+N MISGY NG A +F +
Sbjct: 201 DGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQE 260
Query: 118 MPQRDL---------------------------------------VSWNVMISGYVRNKS 138
M ++ V + ++ Y + S
Sbjct: 261 MQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGS 320
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ A +FE +PKR+ ++W+ ++ +A +G A+ A F M + N++++ G+L+A
Sbjct: 321 IDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380
Query: 195 YVQNGRIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G +EE F + + ++ + L +A+ + MP+ D+V
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDV 440
Query: 249 SWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNG 292
W ++ + L +R L E AP D ++ A+ + Y G
Sbjct: 441 IWKALLGACKMHKNLKMGERVAETLMELAP-HDSGSYVALSNLYASLG 487
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 255/740 (34%), Positives = 387/740 (52%), Gaps = 66/740 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
NA++S ++ G L A VF +M +R+L SWNV++ GY + A +L+ M K
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204
Query: 152 RDVVSW-----------------------------------NTMLSGYAQNGYADAARRI 176
DV ++ N +++ Y + G + AR +
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV-VSWNSLMGGFVKQKRLGDA 235
FD+M ++ ISWN +++ Y +NG E LF + V ++ + LGD
Sbjct: 265 FDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD 324
Query: 236 K-------WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+ ++ RD N++I Y+ + EA+ +F +D+ +WTAM+SGY
Sbjct: 325 RLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGY 384
Query: 289 ---VQNGKVDEARMIFDA---MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
+ K E + +A MP++ T++ +++ +DM L E K + S
Sbjct: 385 ENCLMPQKALETYKMMEAEGIMPDEITIA--IVLSACSCLCNLDMGMNLHEVAKQKGLVS 442
Query: 343 W----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ N++I YA+ I A +F + + +SW +II G + ++L F EM
Sbjct: 443 YSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMI 502
Query: 399 RYGERL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
R RL N VLS CA + +L GK++H ++ G F+ NA+L MY +CG
Sbjct: 503 R---RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGR 559
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+E A+ F VD +V SWN ++ GYA G G A LF+ M + P+++T + IL A
Sbjct: 560 MEYAWKQFFS-VDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCA 618
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS +G+V +G EYF SM Y ++PN KHY C+VDLLGR+G+L+EA ++ MP +PD A
Sbjct: 619 CSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPA 678
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
WGALL +CR++ EL E AAE IF+ + + G Y+LLSNLYA +G+W V++VR MR
Sbjct: 679 VWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMR 738
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
G+ G SW+EV+ VH F D HP+ I A LE K+K+ G V +
Sbjct: 739 QNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAG-VEGPESSHM 797
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
D+ E K + HSE+LA+ +G+++ G PI V KNL +C+ CHN +K IS+ V R I
Sbjct: 798 DIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREI 857
Query: 757 ILRDNNRFHHFSGGSCSCGD 776
+RD +FHHF GG CSC D
Sbjct: 858 SVRDAEQFHHFKGGICSCTD 877
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 184/424 (43%), Gaps = 62/424 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N IT +++ G ++A VF+ MP R +S+NAMISGY NG ++F M
Sbjct: 241 DVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMI 300
Query: 120 Q----RDLVSWNVMIS---------------GYV------RNKS--------------LS 140
+ DL++ +I+ GYV R+ S +
Sbjct: 301 KYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIE 360
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A +F RD+VSW M+SGY A + M + +EI+ +L+A
Sbjct: 361 EAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACS 420
Query: 197 QNGRIEEACMLFESKANWEVVSW----NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
++ L E +VS+ NSL+ + K K + A IF ++ VSW +
Sbjct: 421 CLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTS 480
Query: 253 MITGYAQNNYLAEAQRLFEEAPVK---DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
+I G NN EA F E + + T ++S + G + + I A +
Sbjct: 481 IILGLRINNRCFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGKEI-HAHALRTG 539
Query: 310 VSW-----NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
VS+ NA++ YV+ RM+ A + F ++ V SWN ++TGYA+ G+ HA LF
Sbjct: 540 VSFDGFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHATELFQ 598
Query: 365 RMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANL 419
RM + + +++ +I+ ++SG + L F MK +Y N + V+
Sbjct: 599 RMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRS 658
Query: 420 ASLE 423
LE
Sbjct: 659 GKLE 662
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+GNALL M+ + G++ +A++ F + +++ SWN ++ GYA+ G +AL L+ M VG
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
+KPD T +L C + +G E + R YG + ++ + + G ++ A
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIR-YGFESDVDVVNALITMYVKCGDVNTA 261
Query: 563 QNLMKNMPFEPDAATWGALL------GAC----RLYG 589
+ + MP D +W A++ G C RL+G
Sbjct: 262 RLVFDKMP-NRDRISWNAMISGYFENGVCLEGLRLFG 297
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/738 (34%), Positives = 402/738 (54%), Gaps = 36/738 (4%)
Query: 77 CDS---ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVM 129
CDS A F+++ +R+ S+ +++ + ++GQ + ++M Q D V++
Sbjct: 92 CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITA 151
Query: 130 ISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM-LEKN 184
+ +SL + +M+ D N +L+ Y + G A+R+F +M +N
Sbjct: 152 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 211
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ----KRLGDAKWIFD 240
ISW+ + A+ +G + EA F + + S M + + D + I
Sbjct: 212 VISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHS 271
Query: 241 RMPVR----DEVSWNTMITGYAQNNYLAEAQRLFE--EAPVKDVFTWTAMVSGYVQNGKV 294
+ + + + N ++T Y + + EA+++F+ + ++DV +W M+S YV N +
Sbjct: 272 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRG 331
Query: 295 DEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMARELFEAMTC----KNVASWNTMITG 349
+A ++ M + + V++ ++++ + + + R L + + KNV N +++
Sbjct: 332 KDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSM 391
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF---IEMKRYGERLNR 406
YA+ G T AR +FD+M Q ISW II+ Y + ++ LF +E+++ G
Sbjct: 392 YAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV 451
Query: 407 SP----FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
P F ++L+ CA++++LE GK + Q G + VG A++ +Y KCG +EE
Sbjct: 452 KPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRR 511
Query: 463 AFEEIVDK-DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + + DV WN MIA YA+ G +AL LF M+ G++PD + V IL ACSHTG
Sbjct: 512 IFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTG 571
Query: 522 LVEKGTEYFYSMNRDY-GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
L ++G YF SM +Y V +H+ C+ DLLGR GRL EA+ ++ +P +PDA W +
Sbjct: 572 LEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTS 631
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
LL ACR + + A++ A + +EP A YV LSN+YA +W V+KVR M ++GV
Sbjct: 632 LLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGV 691
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGE 700
KK G S +E+ +H F+ GD HP I L +L ++K+ G+V TK+VLH V E
Sbjct: 692 KKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDE 751
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
+EKE +L HSE+LA+A G++S P G P+RV KNLRVC DCH A K ISKI GR I++RD
Sbjct: 752 QEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRD 811
Query: 761 NNRFHHFSGGSCSCGDYW 778
RFH F G CSC DYW
Sbjct: 812 PTRFHLFKDGKCSCQDYW 829
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 339 NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
N+ N +++ YA A+ FD + Q + SW ++A +A SG S+++LR M+
Sbjct: 78 NLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR 137
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ G R + F + L +C + SL G ++H +V E V NALL MY KCGS+
Sbjct: 138 QDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLS 197
Query: 459 EAYHAFEEIV-DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A F ++ ++VISW+ M +A HG +AL F M +GIK MV ILSAC
Sbjct: 198 HAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSAC 257
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE-PDAA 576
S LV+ G +S G ++ + GR G ++EA+ + M D
Sbjct: 258 SSPALVQDG-RLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316
Query: 577 TWGALLGA 584
+W +L A
Sbjct: 317 SWNIMLSA 324
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 49/403 (12%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPR--RSSVSYNAMISGYLLNGQLDPARQVFDQMPQR- 121
N +T + R G + A VF++M R VS+N M+S Y+ N + A Q++ +M R
Sbjct: 286 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA 345
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADAARRIF 177
D V++ ++S + + R L + + +++V+ N ++S YA+ G AR +F
Sbjct: 346 DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVF 405
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
D+M +++ ISW +++AYV+ + EAC LF+ E + G ++
Sbjct: 406 DKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE---------------KNGSSQR 450
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGK 293
+ P D +++ T++ A + L + + + E+A D TA+V+ Y + G+
Sbjct: 451 V---KP--DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGE 505
Query: 294 VDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMIT 348
++E R IFD + + V WNAMIA Y Q + A +LF M + V S+ +++
Sbjct: 506 IEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILL 565
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
+ +G ++ F M + + G D L +K E L + P
Sbjct: 566 ACSHTGLEDQGKSYFTSMT----TEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLP 621
Query: 409 -------FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
+TS+L+ C N L+ K++ +L++ E C G
Sbjct: 622 VKPDAVAWTSLLAACRNHRDLKRAKEVANKLLR--LEPRCATG 662
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 153/339 (45%), Gaps = 32/339 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRS-SVSYNAMISGYLLNGQLDPAR----QV 114
D+ WN+ ++ ++ N A+ ++ M R+ V+Y +++S + R Q+
Sbjct: 314 DVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQI 373
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
+ +++++ N ++S Y + S + AR +F+ M +R ++SW T++S Y + A
Sbjct: 374 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 433
Query: 175 RIFDRMLE-----------KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
+F +MLE + +++ +L A +E+ M+ E A+ + S ++
Sbjct: 434 HLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVG 493
Query: 224 GGFV----KQKRLGDAKWIFDRMPVRDEVS-WNTMITGYAQNNYLAEAQRLF----EEAP 274
V K + + + IFD + R +V WN MI YAQ EA +LF E
Sbjct: 494 TAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGV 553
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-----NTVSWNAMIAGYV-QTKRMDMA 328
D F++ +++ G D+ + F +M + T+ +A + + R+ A
Sbjct: 554 RPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEA 613
Query: 329 RELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRM 366
E E + K + +W +++ ++ A+ + +++
Sbjct: 614 EEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKL 652
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV-GNALLVMYCK 453
+++++ R + + +L CA +L G+++H VK G + GN ++ MY
Sbjct: 32 LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAH 91
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
C S +A AF+ + +++ SW ++A +A G K+ L E M+ G++PD +T +
Sbjct: 92 CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITA 151
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L +C + G + M D + + K ++++ + G L A+ + M
Sbjct: 152 LGSCGDPESLRDGIR-IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTR 210
Query: 574 DAATWGALLGACRLYG 589
+ +W + GA L+G
Sbjct: 211 NVISWSIMAGAHALHG 226
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/546 (38%), Positives = 328/546 (60%), Gaps = 21/546 (3%)
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEE--------APVKDVFTWTA-------MVSGYVQNG 292
V+WN +I+G+ + E+ F + PV V +A ++ G +G
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+V + ++ D E NA++ Y + M A ++F+ M ++V SW ++++G A+
Sbjct: 148 RVVGSGVLPDLRVE------NALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLAR 201
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G++ AR+LFDRMP+ D +SW A+I GY + ++L +F EM+ + SV
Sbjct: 202 LGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSV 261
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
++ CA L +LE+G+ + + + G + FVGNAL+ MY KCGS+E A F+ + +D
Sbjct: 262 ITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDK 321
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+W +I G A +G+ ++A+ +F M V PD++T +G+L+AC+H GLV+KG E+F S
Sbjct: 322 FTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLS 381
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
M Y + PN HY C++DLLGRAG++ EA + + MP P++ WG LL ACR++G +E
Sbjct: 382 MIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441
Query: 593 LAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQ 652
+ E AE + E++PEN+ +Y+LLSN+YA RW DV ++R + ++G+KK G S +E+
Sbjct: 442 IGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMD 501
Query: 653 NKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSE 712
+H F GD HP IY+ LE + L G+ V +V E+EK+ +L +HSE
Sbjct: 502 GIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSE 561
Query: 713 KLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSC 772
KLA+A+ +LS IR++KNLR+C DCHNAIK IS++ GR +++RD RFHHF G C
Sbjct: 562 KLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFC 621
Query: 773 SCGDYW 778
SC DYW
Sbjct: 622 SCKDYW 627
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 178/385 (46%), Gaps = 34/385 (8%)
Query: 155 VSWNTMLSGYAQNG--------YADAARR-------IFDRMLEKNEISWNGLLAAYVQNG 199
V+WN ++SG+ + G + D AR + +L +L +G
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 200 RIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
R+ + +L + + N+L+ + + +G A +FD M VR VSW ++++G A+
Sbjct: 148 RVVGSGVLPDLRVE------NALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLAR 201
Query: 260 NNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAM 315
+ EA+ LF+ P +D +WTAM+ GYV + EA +F M N + ++
Sbjct: 202 LGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSV 261
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDC 371
I Q ++M + M+ + + N +I Y++ G I A ++F M D
Sbjct: 262 ITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDK 321
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+W AII G A +GY E+++ +F M R E + F VL+ C + ++ G++
Sbjct: 322 FTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLS 381
Query: 432 LVKVGFEAGCFVGNALLV-MYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGK 489
+++ A V ++ + + G + EA +++ + + W T++A HG +
Sbjct: 382 MIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441
Query: 490 DALMLFESMKTVGIKPDDITMVGIL 514
++ E + + + P++ +MV IL
Sbjct: 442 IGELVAE--RLLELDPEN-SMVYIL 463
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 139/338 (41%), Gaps = 62/338 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+R N + + SA VF+ M RS VS+ +++SG GQ+D AR +FD+MP
Sbjct: 157 DLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMP 216
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+RD VSW MI GYV A +F M +V
Sbjct: 217 ERDTVSWTAMIDGYVWAARFREALEMFREMQYSNV------------------------- 251
Query: 180 MLEKNEISWNGLLAAYVQNGRIE--EACMLFESKANWEVVSW--NSLMGGFVKQKRLGDA 235
+E + ++ A Q G +E E ++ S+ ++ ++ N+L+ + K + A
Sbjct: 252 --SADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERA 309
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQN 291
+F M RD+ +W +I G A N Y EA R+ + D T+ +++
Sbjct: 310 LDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHA 369
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
G VD+ R F +M E ++ NV + +I
Sbjct: 370 GLVDKGREFFLSMIEAYNIA--------------------------PNVVHYGCIIDLLG 403
Query: 352 QSGEITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSE 388
++G+IT A + D+MP + W ++A G SE
Sbjct: 404 RAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 340/559 (60%), Gaps = 47/559 (8%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G+++ AR+VF++M QRD+VSWN MI+GY +N + AR LF+ +++ +W +L+GYA
Sbjct: 53 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYA 112
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ G + AR +F+ M E+N +SWN +++ YVQNG ++ A LF+ V SWNS++ G
Sbjct: 113 KEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTG 172
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-EEAPVKDVFTWTAM 284
+ R+ +A+ +FD+MP R+ VSW MI+GY + EA +F + ++ ++WT M
Sbjct: 173 YCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTRNEYSWTTM 232
Query: 285 VSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMARELFEAM-------- 335
++ + Q G++D+A +++ +PE+ N+ SW AMIAG+VQ + A EL +
Sbjct: 233 IAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELLIELHRSGSVPS 292
Query: 336 ---------TCKNVAS----------------------WNTMITGYAQSGEITHARNLFD 364
C N+ N +I+ YA+ G + ++F
Sbjct: 293 DSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFR 352
Query: 365 --RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
RMP+ D +SW AII+ Y Q+G+ E +L LF++M G + N+ TS+LS C NL ++
Sbjct: 353 TIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAI 412
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+LG+Q H + K+GF+ FVGN+L+ MY KCG E+ + FEE+ + D+I+WN ++ G
Sbjct: 413 KLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGC 471
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
A++G GK+A+ +FE M+ GI PD ++ +G+L ACSH GLV++G +F SM + YG++P
Sbjct: 472 AQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPL 531
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL---AEKAAE 599
HYTCMVDLLGRAG L EA+ L++NMP +PD+ W ALLGACR++ EL +EK A
Sbjct: 532 VYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNNELLYHSEKLAV 591
Query: 600 VIFEMEPENAGMYVLLSNL 618
V + N ++ NL
Sbjct: 592 VFGILSTPNGSPIQIIKNL 610
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/643 (36%), Positives = 359/643 (55%), Gaps = 38/643 (5%)
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
P+ + NT + + G + ARR+F+ M++++ +SWN ++ Y QNG+++EA +LF+
Sbjct: 35 PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFD 94
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL 269
+ + +W L+ G+ K+ R+ +A+ +F+ M R+ VSWN MI+GY QN L A++L
Sbjct: 95 AFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKL 154
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
F+E P K+V +W ++V+GY ++ EAR +FD MPE+N+VSW MI+GYV A
Sbjct: 155 FDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAW 214
Query: 330 ELFEAMT-CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYS 387
++F M +N SW TMI +AQ G + A L++R+P Q + SWAA+IAG+ Q+ S
Sbjct: 215 DVFVKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEES 274
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
++L L IE+ R G + S FTS LS CAN+ +E+G+ +H +K G + +V N L
Sbjct: 275 REALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGL 334
Query: 448 LVMYCKCGSVEEAYHAFEEI--VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+ MY KCG+VE+ H F I +DV+SW +I+ Y + G G+ AL LF M GIKP
Sbjct: 335 ISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKP 394
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ +T+ +LSAC + G ++ G E F+++ G ++ + + G ++ +
Sbjct: 395 NQLTVTSLLSACGNLGAIKLG-EQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCV 452
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ MP E D TW A+L C G L ++A ++ +ME E +L + + G
Sbjct: 453 FEEMP-EHDLITWNAVLVGCAQNG---LGKEAIKIFEQMEVEG-----ILPDQMSFLGVL 503
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI-----YAYLEELE- 679
S L D G W + + + ++ + YL E E
Sbjct: 504 CACSHAGLV--DEG--------WAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEA 553
Query: 680 ----FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
+K D ++ L + + + L YHSEKLAV +GILS P G PI+++KNL
Sbjct: 554 LIENMPVKPDSVIWEALLGACRI---HRNNELLYHSEKLAVVFGILSTPNGSPIQIIKNL 610
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
R+C DCH +K +SK+ R II+RD NRFHHF GSCSCGDYW
Sbjct: 611 RICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 653
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 176/356 (49%), Gaps = 37/356 (10%)
Query: 270 FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+E P +F + + G+V+EAR +F+ M +++ VSWN+MI GY Q ++D AR
Sbjct: 31 IQETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEAR 90
Query: 330 ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSED 389
LF+A KN+ +W ++TGYA+ G I AR +F+ M + + +SW A+I+GY Q+G ++
Sbjct: 91 LLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKN 150
Query: 390 SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL----------------- 432
+ +LF EM N + + SV++ + + ++L Q+
Sbjct: 151 ARKLFDEMPEK----NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVH 206
Query: 433 -----------VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK-DVISWNTMIA 480
VK+ + ++ + +CG +++A +E + ++ + SW MIA
Sbjct: 207 ISDYWEAWDVFVKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIA 266
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
G+ ++ ++AL L + G P D + LSAC++ G VE G +S+ G
Sbjct: 267 GFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG-RVIHSLAIKTGCQ 325
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKN--MPFEPDAATWGALLGACRLYGKTELA 594
NS ++ + + G +++ ++ + MP + D +W A++ A G E+A
Sbjct: 326 FNSYVMNGLISMYAKCGNVEDGSHVFRTIRMP-KRDVVSWTAIISAYVQAGHGEVA 380
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/700 (34%), Positives = 377/700 (53%), Gaps = 61/700 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N+++ Y+ G + A VF + L WN MI GY + A ++F MP+RD V
Sbjct: 181 NSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHV 240
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML---- 207
SWNT++S ++Q G+ F M + N +++ +L+A ++ L
Sbjct: 241 SWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARI 300
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + + + L+ + K L A+ +F+ + +++VSW +I+G AQ +A
Sbjct: 301 LRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDAL 360
Query: 268 RLFEE----APVKDVFTWTAMV-----SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
LF + + V D FT ++ Y G++ I M V NA+I
Sbjct: 361 ALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVG-NAIITM 419
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + + A F +M ++ SW MIT ++Q+G+I AR FD MP+ + I+W +++
Sbjct: 420 YARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSML 479
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+ Y Q G+SE+ ++L++ M+ + + F + + CA+LA+++LG Q+ + K G
Sbjct: 480 STYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLS 539
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
+ V N+++ MY +CG ++EA F+ I K++ISWN M+A +A++G G A+ +E M
Sbjct: 540 SDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDM 599
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
KPD I+ V +LS DLLGRAG
Sbjct: 600 LRTECKPDHISYVAVLS-----------------------------------DLLGRAGL 624
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
LD+A+NL+ MPF+P+A WGALLGACR++ + LAE AA+ + E+ E++G YVLL+N+
Sbjct: 625 LDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANI 684
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
YA SG +V+ +R M+ +G++K G SW+EV N+VH F+V +T HP+ + +Y LEE+
Sbjct: 685 YAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEM 744
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K++ G S H +YHSEKLA A+G+LS+P PI+V KNLRVC
Sbjct: 745 MKKIEDTGRYVSIVSCAHRSQ--------KYHSEKLAFAFGLLSLPPWMPIQVTKNLRVC 796
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH IK +S + R +I+RD RFHHF G CSC DYW
Sbjct: 797 NDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 226/479 (47%), Gaps = 27/479 (5%)
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
L+ + N LL Y G +++A +F + + +WN+++ F R+ +A+ +FD
Sbjct: 35 LDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSGRMREAENLFD 94
Query: 241 RMP--VRDEVSWNTMITGYAQNNYLAEAQRLF--------EEAPVKDVFTWTAMVSGYVQ 290
MP VRD VSW TMI+GY QN A + + F + D F++T +
Sbjct: 95 EMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTCTMKAC-- 152
Query: 291 NGKVDEARMIFDAMPE-------KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW 343
G + R T N+++ Y++ + +A +F + ++ W
Sbjct: 153 -GCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCW 211
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N+MI GY+Q A ++F RMP+ D +SW +I+ ++Q G+ L F+EM G +
Sbjct: 212 NSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFK 271
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N + SVLS CA+++ L+ G LH +++++ F+G+ L+ MY KCG + A
Sbjct: 272 PNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRV 331
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F + +++ +SW +I+G A+ G DAL LF M+ + D+ T+ IL CS
Sbjct: 332 FNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYA 391
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
G E + G+ ++ + R G ++A ++MP D +W A++
Sbjct: 392 ATG-ELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLR-DTISWTAMIT 449
Query: 584 ACRLYGKTELAEKAAEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
A G + A + F+M PE N + + + Y G + K+ + MR + VK
Sbjct: 450 AFSQNGDIDRARQC----FDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVK 504
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 195/445 (43%), Gaps = 88/445 (19%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY-LLNGQLDPARQVFDQMPQRDL 123
N + +++ G A VF ++ S +N+MI GY L G + A VF +MP+RD
Sbjct: 181 NSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYE-ALHVFTRMPERDH 239
Query: 124 VSWNVMISGYVRN----KSLSAARNLFEMMPKRDVVSWNTMLSG---------------- 163
VSWN +IS + + + LS + + K + +++ ++LS
Sbjct: 240 VSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHAR 299
Query: 164 -------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
YA+ G ARR+F+ + E+N++SW L++ Q G ++A
Sbjct: 300 ILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDA 359
Query: 205 CMLFESKANWEVV----SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW----NTMITG 256
LF VV + +++G Q + + S+ N +IT
Sbjct: 360 LALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITM 419
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ +A F P++D +WTAM++ + QNG +D AR FD MPE+N ++WN+M+
Sbjct: 420 YARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSML 479
Query: 317 AGYVQTKRMDMARELFEAMTCK-------------------------------------- 338
+ Y+Q + +L+ M K
Sbjct: 480 STYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLS 539
Query: 339 -NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+V+ N+++T Y++ G+I AR +FD + + ISW A++A +AQ+G ++ + +M
Sbjct: 540 SDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDM 599
Query: 398 KRYGERLNRSPFTSVLSTCANLASL 422
R + + + +VLS A L
Sbjct: 600 LRTECKPDHISYVAVLSDLLGRAGL 624
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 166/383 (43%), Gaps = 89/383 (23%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV--- 124
I + + GC A VFNS+ ++ VS+ +ISG G D A +F+QM Q +V
Sbjct: 316 IDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDE 375
Query: 125 ------------------------------------SWNVMISGYVRNKSLSAARNLFEM 148
N +I+ Y R A F
Sbjct: 376 FTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRS 435
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
MP RD +SW M++ ++QNG D AR+ FD M E+N I+WN +L+ Y+Q+G EE L+
Sbjct: 436 MPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLY 495
Query: 209 ------ESKANW--------------------EVVSW-------------NSLMGGFVKQ 229
K +W +VVS NS++ + +
Sbjct: 496 VLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRC 555
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA----PVKDVFTWTAMV 285
++ +A+ +FD + V++ +SWN M+ +AQN +A +E+ D ++ A++
Sbjct: 556 GQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVL 615
Query: 286 SGYV-QNGKVDEARMIFDAMPEK-NTVSWNAMIAG----YVQTKRMDMARELFEAMTCKN 339
S + + G +D+A+ + D MP K N W A++ + A++L E + ++
Sbjct: 616 SDLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAKKLME-LNVED 674
Query: 340 VASWNTMITGYAQSGEITHARNL 362
+ + YA+SGE+ + ++
Sbjct: 675 SGGYVLLANIYAESGELENVADM 697
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D W IT +NG D A F+ MP R+ +++N+M+S Y+ +G + +++ M
Sbjct: 440 DTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMR 499
Query: 120 QR----DLVSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYAD 171
+ D V++ I ++ + + K DV N++++ Y++ G
Sbjct: 500 SKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIK 559
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFV 227
AR++FD + KN ISWN ++AA+ QNG +A +E E +S+ +++ +
Sbjct: 560 EARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDLL 619
Query: 228 KQKRLGD-AKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE-AQRLFEEAPVKDVFTWT 282
+ L D AK + D MP + + W ++ ++ LAE A + E V+D +
Sbjct: 620 GRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYV 679
Query: 283 AMVSGYVQNGKVD 295
+ + Y ++G+++
Sbjct: 680 LLANIYAESGELE 692
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
S + ++LH QL+ G +A F+ N LL MY CG V++A+ F E ++ +WNTM+
Sbjct: 19 SPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLH 78
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
+ G ++A LF+ M I D ++ ++S GL + F SM RD
Sbjct: 79 AFFDSGRMREAENLFDEMP--HIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRD 132
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/526 (40%), Positives = 321/526 (61%), Gaps = 39/526 (7%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF---- 332
DV +++ Y + G V+ AR +FD M E++ VSWN MI Y + + A ++F
Sbjct: 87 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 146
Query: 333 ----------------------EAMTCK-------------NVASWNTMITGYAQSGEIT 357
+A+ CK N+ ++ YA+ G I
Sbjct: 147 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 206
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F+ M ++W++++AGY Q+ E++L L+ +R N+ +SV+ C+
Sbjct: 207 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 266
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
NLA+L GKQ+H + K GF + FV ++ + MY KCGS+ E+Y F E+ +K++ WNT
Sbjct: 267 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 326
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I+G+A+H K+ ++LFE M+ G+ P+++T +LS C HTGLVE+G +F M Y
Sbjct: 327 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 386
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ PN HY+CMVD+LGRAG L EA L+K++PF+P A+ WG+LL +CR+Y ELAE A
Sbjct: 387 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 446
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE +FE+EPENAG +VLLSN+YAA+ +W +++K R +RD VKKV G SW+++++KVHT
Sbjct: 447 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 506
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
FSVG++ HP I + L+ L K ++ G+ S + LHDV +KE +L HSEKLA+
Sbjct: 507 FSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 566
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
+G++ +P P+R+MKNLR+C DCH +K S R II+RD NR
Sbjct: 567 FGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 612
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 194/423 (45%), Gaps = 34/423 (8%)
Query: 87 MPRRS---SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
+PRRS S+S N + ++ P R ++ R+LV + + RN ++ A+
Sbjct: 17 LPRRSNTSSLSRNISVLASYDQEEVSPGRYS-NEFSNRNLVHEILQLCA--RNGAVMEAK 73
Query: 144 ----NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
+ + + DV N +++ Y++ G+ + AR++FD MLE++ +SWN ++ Y +N
Sbjct: 74 ACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNR 133
Query: 200 RIEEACMLFESKANW-----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN--- 251
EA +F N E + L V L K + V+ + N
Sbjct: 134 MESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK--LHCLSVKTCIDLNLYV 191
Query: 252 --TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP---- 305
++ YA+ + +A ++FE K TW++MV+GYVQN +EA +++
Sbjct: 192 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 251
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHAR 360
E+N + +++I + +++ A+ CK NV ++ + YA+ G + +
Sbjct: 252 EQNQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 310
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+F + + + W II+G+A+ ++ + LF +M++ G N F+S+LS C +
Sbjct: 311 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 370
Query: 421 SLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTM 478
+E G++ + G + ++ + + G + EAY + I D W ++
Sbjct: 371 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 430
Query: 479 IAG 481
+A
Sbjct: 431 LAS 433
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 399 RYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
RY NR+ +L CA ++ K HG+++++ E + N L+ Y KCG V
Sbjct: 45 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 104
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E A F+ ++++ ++SWNTMI Y R+ +AL +F M+ G K + T+ +LSAC
Sbjct: 105 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 164
Query: 518 S-HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+ +E + + ++ + N T ++DL + G + +A + ++M + +
Sbjct: 165 GVNCDALE--CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSV 221
Query: 577 TWGALLG 583
TW +++
Sbjct: 222 TWSSMVA 228
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 129/298 (43%), Gaps = 45/298 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D ++ + + + G A+ VF SM +SSV++++M++GY+ N + A
Sbjct: 182 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 241
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPK----RDVVSWNTMLSGYA 165
++ + + L +S + S AA + + ++ K +V ++ + YA
Sbjct: 242 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 301
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ G + IF + EKN WN +++ + ++ R +E +LFE
Sbjct: 302 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE---------------- 345
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFT 280
K ++ G +EV+++++++ + E +R F+ +V
Sbjct: 346 --KMQQDGMHP---------NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 394
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDM----ARELFE 333
++ MV + G + EA + ++P T S W +++A K +++ A +LFE
Sbjct: 395 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE 452
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/573 (38%), Positives = 340/573 (59%), Gaps = 13/573 (2%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ S++ V + LG + + R+ V D V ++ YA + A+RLF+ P
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
++VF W ++ Y ++G + A ++ M E + ++ + ++ RE
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184
Query: 331 LFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ E + +++ ++ YA+ G + AR +FDR+ D + W ++IA Y Q+G
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
++L L +M G + S +S A+ A+L G++LHG + GF+ + +
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTS 304
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKP 505
L+ MY K G V+ A FE+++ ++++SWN MI GY HG +AL LF M+ + P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTP 364
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D+IT VG+LSAC+H G+V++ E+F M Y + P +H+TC+VD+LG AGR +EA +L
Sbjct: 365 DNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+K MP +PD+ WGALL C+++ EL E A + + E+EPE+AG YVLLSN+YA SG+W
Sbjct: 425 IKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKW 484
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
++VR M +RG+KK+ G SW+E++ K H F VGD HP IY LE LE +
Sbjct: 485 EKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDA 544
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G++ T V HDVG++EK +M+R HSE+LA+A+G++S P+G + V KNLRVCEDCH I
Sbjct: 545 GYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVI 604
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K IS+IV R II+RD NR+HHF G CSC DYW
Sbjct: 605 KLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 154/372 (41%), Gaps = 69/372 (18%)
Query: 92 SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
+V ++ Y G + AR++FD MP+R++ WNV+I Y R+ A L+ M
Sbjct: 97 TVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVD 156
Query: 152 ---------------------------------------RDVVSWNTMLSGYAQNGYADA 172
D+ ++ YA+ G D
Sbjct: 157 YGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDD 216
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----------VSWNSL 222
AR +FDR+ ++ + WN ++AAY QNGR EA L A V +S +
Sbjct: 217 ARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAAD 276
Query: 223 MGGFVKQKRLGDAKWI--FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+ + L W FDR +D++ +++ YA++ ++ A+ LFE+ +++ +
Sbjct: 277 AAALPRGRELHGFGWRRGFDR---QDKLK-TSLVDMYAKSGWVQVARVLFEQLMKRELVS 332
Query: 281 WTAMVSGYVQNGKVDEARMIFDAM-----PEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
W AM+ GY +G DEA +F+ M + +++ +++ + A+E F M
Sbjct: 333 WNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLM 392
Query: 336 T-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG---YAQSGY 386
V + ++ +G A +L MP Q D W A++ G +
Sbjct: 393 VDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVEL 452
Query: 387 SEDSLRLFIEMK 398
E +L+ IE++
Sbjct: 453 GELALQKLIELE 464
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 177/437 (40%), Gaps = 76/437 (17%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
V S S+ + G LL L P D V ++ Y + A
Sbjct: 68 VLQSCVASRSLGTGRQLHGRLLVSGLGP-----------DTVLATKLVDLYAACGLVGHA 116
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAA----RRIFDRMLEKNEISWNGLLAAYVQN 198
R LF+ MPKR+V WN ++ YA++G + A R + D +E + ++ L A
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL 176
Query: 199 GRIEEACMLFES--KANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
+E + E +W ++ L+ + K + DA+ +FDR+ VRD V WN+MI
Sbjct: 177 LDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMI 236
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDV----------------------------FTW----- 281
Y QN EA L + V F W
Sbjct: 237 AAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFD 296
Query: 282 ------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF--- 332
T++V Y ++G V AR++F+ + ++ VSWNAMI GY D A +LF
Sbjct: 297 RQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKM 356
Query: 333 --EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSG 385
EA + ++ +++ G + A+ F M I + ++ +G
Sbjct: 357 RVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAG 416
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
E++ L M + + + ++L+ C ++ELG+ +L+++ E GN
Sbjct: 417 RFEEAYDLIKGMPM---QPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDA---GN 470
Query: 446 ALLV--MYCKCGSVEEA 460
+L+ +Y + G E+A
Sbjct: 471 YVLLSNIYAQSGKWEKA 487
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 165/411 (40%), Gaps = 63/411 (15%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
WNV I + R+G + A+ ++ M + +Y + L+ R+V +++
Sbjct: 131 WNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVL 190
Query: 120 ----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR 175
D+ ++ Y + + AR +F+ + RD V WN+M++ Y QNG R
Sbjct: 191 GTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG------R 244
Query: 176 IFDRMLEKNEISWNGL---LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
+ + +++ NG+ +A V W GF +Q +L
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRR---GFDRQDKL 301
Query: 233 --------GDAKWI------FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-- 276
+ W+ F+++ R+ VSWN MI GY + + EA +LF + V+
Sbjct: 302 KTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQ 361
Query: 277 ---DVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVS-WNAMIAGYVQTKRMDMA 328
D T+ ++S G V EA+ F M + K TV + ++ R + A
Sbjct: 362 VTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEA 421
Query: 329 RELFEAMTCK-NVASWNTMITGY-----AQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
+L + M + + W ++ G + GE+ + L + P+ D ++ + YA
Sbjct: 422 YDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELA-LQKLIELEPE-DAGNYVLLSNIYA 479
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
QSG E + R+ M G L + +EL + HG LV
Sbjct: 480 QSGKWEKAARVRKLMTNRG-----------LKKIIGCSWIELKGKTHGFLV 519
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/605 (36%), Positives = 353/605 (58%), Gaps = 21/605 (3%)
Query: 192 LAAYVQNGRIEEACM---LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
++ NGR++EA + + + + +++L+ + ++ L D + + M ++
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFH--GYDALLNACLDKRALRDGQRVHAHM-IKTRY 83
Query: 249 SWNT-----MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
T ++ Y + + L +A+++ +E P K+V +WTAM+S Y Q G EA +F
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 304 M----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGE 355
M + N ++ ++ ++ + + +++ + N S ++++ YA++G+
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I AR +F+ +P+ D +S AIIAGYAQ G E++L +F + G N + S+L+
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
+ LA L+ GKQ H +++ + N+L+ MY KCG++ A F+ + ++ ISW
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSM- 533
N M+ GY++HG G++ L LF M+ +KPD +T++ +LS CSH + + G F M
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+YG P ++HY C+VD+LGRAGR+DEA +K MP +P A G+LLGACR++ ++
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 443
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
E + E+EPENAG YV+LSNLYA++GRW DV+ VR M + V K G SW++ +
Sbjct: 444 GESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQ 503
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+H F D HP ++ + A ++E+ K+KQ G+V VL+DV EE+KE ML HSEK
Sbjct: 504 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEK 563
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+ +G+++ G PIRV KNLR+C DCHN K SK+ R + LRD NRFH G CS
Sbjct: 564 LALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICS 623
Query: 774 CGDYW 778
CGDYW
Sbjct: 624 CGDYW 628
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 139/325 (42%), Gaps = 60/325 (18%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD------------- 122
C + A V + MP ++ VS+ AMIS Y G A VF +M + D
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 123 -----------------LVSWNV---------MISGYVRNKSLSAARNLFEMMPKRDVVS 156
+V WN ++ Y + + AR +FE +P+RDVVS
Sbjct: 162 SCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVS 221
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA-----AYVQNGRIEEACML 207
+++GYAQ G + A +F R+ + N +++ LL A + +G+ + C +
Sbjct: 222 CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK-QAHCHV 280
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + V NSL+ + K L A+ +FD MP R +SWN M+ GY+++ E
Sbjct: 281 LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVL 340
Query: 268 RLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMI 316
LF +E VK D T A++SG D IFD M + T + ++
Sbjct: 341 ELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIV 400
Query: 317 AGYVQTKRMDMARELFEAMTCKNVA 341
+ R+D A E + M K A
Sbjct: 401 DMLGRAGRIDEAFEFIKRMPSKPTA 425
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 34/324 (10%)
Query: 103 LLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK---------SLSAARNLFEMMPKRD 153
LLN LD Q ++ + + Y+R + L AR + + MP+++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
VVSW M+S Y+Q G++ A +F M+ +++ N A V I + + + +
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMM-RSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 214 WEVVSWN---------SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+V WN SL+ + K ++ +A+ IF+ +P RD VS +I GYAQ
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 265 EA----QRLFEEAPVKDVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
EA RL E + T+ ++++ + +GK ++ +P V N++
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP-FYAVLQNSL 295
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF-----DRMPQHD 370
I Y + + AR LF+ M + SWN M+ GY++ G LF ++ + D
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 371 CISWAAIIAGYAQSGYSEDSLRLF 394
++ A+++G + + L +F
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIF 379
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 19/265 (7%)
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F P + + I+ +G +++L +EM G + + ++L+ C + +L
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G+++H ++K + ++ LL+ Y KC +E+A +E+ +K+V+SW MI+ Y
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGV 539
++ G +AL +F M KP++ T +L++C S GL ++ N D +
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
S ++D+ +AG++ EA+ + + +P E D + A++ Y + L E+A E
Sbjct: 189 FVGSS----LLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAG---YAQLGLDEEALE 240
Query: 600 VIFEMEPENAGM---YVLLSNLYAA 621
+ + E GM YV ++L A
Sbjct: 241 MFHRLHSE--GMSPNYVTYASLLTA 263
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D+ I + + G + AL +F+ + + V+Y ++++ LD +Q
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ +R+L V N +I Y + +LS AR LF+ MP+R +SWN ML GY+++G
Sbjct: 278 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 172 AARRIFDRMLEKNEISWNG--LLAAY--VQNGRIEEACM-LFESKANWEVVS------WN 220
+F M ++ + + LLA +GR+E+ + +F+ E + +
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYG 397
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR 245
++ + R+ +A RMP +
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSK 422
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 349/572 (61%), Gaps = 13/572 (2%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
+++ + + K L DA+ + + D N++I Y + + EA+++F+E
Sbjct: 54 YHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMR 113
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARE 330
KD+ +WT++++GY QN +EA + M + N ++ +++ + R+
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173
Query: 331 LFE-AMTC---KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ A+ C ++V + ++ YA+ G + A +FD++ + +SW A+I+G+A+ G
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGD 233
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E +L F EM R G ++SV S+ A L +LE GK +H ++K + F GN
Sbjct: 234 GETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNT 293
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
LL MY K GS+ +A F+ + DKD+++WNTM+ +A++G GK+A+ FE M+ GI +
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T + IL+ACSH GLV++G YF M ++Y + P H+ +V LLGRAG L+ A +
Sbjct: 354 QVTFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFI 412
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
MP EP AA WGALL ACR++ ++ + AA+ +FE++P+++G VLL N+YA++G+W
Sbjct: 413 FKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWD 472
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
++VR M+ GVKK SW+E++N VH F D HP + IY ++ K++++G
Sbjct: 473 AAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEG 532
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V VL V ++E+E L+YHSEKLA+A+ ++ +PAG IR+MKN+R+C DCH+A K
Sbjct: 533 YVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFK 592
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ISK+ GR I++RD NRFHHFS GSCSC DYW
Sbjct: 593 YISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 186/440 (42%), Gaps = 70/440 (15%)
Query: 1 MRGNNRLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWD 60
MR ++L L + +L++HT R + NP P+ + R L+ + P
Sbjct: 1 MRKPHKL--LPNYLLLYRHT----RPYTSTAANPVPAASAVLRDLDLLDAGELAPTP--- 51
Query: 61 IRQWNVAITTHMRNGCCDSA--LHVFNSMPRRSSVSY--NAMISGYLLNGQLDPARQVFD 116
R ++ IT ++ + A +H + R + ++ N++I Y G + AR+VFD
Sbjct: 52 -RVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFD 110
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK------------------------- 151
+M ++D+VSW +I+GY +N A L M K
Sbjct: 111 EMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGI 170
Query: 152 --------------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
DV + +L YA+ G D A +FD++ KN +SWN L++ + +
Sbjct: 171 GRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFAR 230
Query: 198 NGRIEEACMLFES--KANWEVV--SWNSLMGGFVKQKRLGDAKWIFDRMPVRDE----VS 249
G E A M F + +E +++S+ + L KW+ M + +
Sbjct: 231 KGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFA 290
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-- 307
NT++ YA++ + +A+++F+ KD+ TW M++ + Q G EA F+ M +
Sbjct: 291 GNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGI 350
Query: 308 --NTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----VASWNTMITGYAQSGEITHARN 361
N V++ ++ + + FE M + + + T++ ++G + A
Sbjct: 351 YLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALV 410
Query: 362 LFDRMP-QHDCISWAAIIAG 380
+MP + W A++A
Sbjct: 411 FIFKMPIEPTAAVWGALLAA 430
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/541 (39%), Positives = 320/541 (59%), Gaps = 14/541 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----E 306
N ++ Y + L A+ +F P ++VF+WT MV+ + NG +A + + M
Sbjct: 96 NLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGIS 155
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNL 362
N++++ ++ +D R L + C ++ N +I YA+ + A ++
Sbjct: 156 PNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSV 215
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F+ + I+W A++A YA +G+ D+L++F+ M G F +V+ CA++A
Sbjct: 216 FESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVF 275
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
+G+++HG ++ EA VGNAL+ MY KC S +EA F+ + KD+I+WN+MIA Y
Sbjct: 276 GIGREVHG-VIDARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVY 334
Query: 483 ARHGFGKDALMLFESMK-----TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
++G+G AL +++ M+ +GI DDIT +G+L ACSH GLV+ + + SM DY
Sbjct: 335 GQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDY 394
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G P S C++DLLGRAG LDEA+ + +MP+ PD W LLGAC + E A +A
Sbjct: 395 GFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARA 454
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
A+ I + P ++G YV LSNLYA + RW D++++R M RGV K+ G S +E+ +H
Sbjct: 455 ADRIMALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHE 514
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F GDT HP K IY L +E +++ G+V K VLH+ E KE M +HSE+LA+A
Sbjct: 515 FIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIA 574
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G++S P G +R+MKNLRVC DCH+A K ISK GR II+RD NRFH F GSCSC DY
Sbjct: 575 FGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSGRKIIVRDANRFHEFRNGSCSCEDY 634
Query: 778 W 778
W
Sbjct: 635 W 635
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 32/299 (10%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LE 182
N+++ Y + SL AA+++F + P+R+V SW M++ +A NG+ A + + M +
Sbjct: 96 NLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGIS 155
Query: 183 KNEISWNGLLAA-----YVQNGRIEE---ACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
N I++ LL A ++ GR AC F + ++ N L+ + K + L D
Sbjct: 156 PNSITFIELLGAVAALSWLDRGRALHRRIACCGFLA----DIFVANCLINMYAKCRSLAD 211
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------EEAPVKDVFTWTAMVSGY 288
A +F+ + R ++W ++ YA N + +A ++F P + F V
Sbjct: 212 ACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCAD 271
Query: 289 VQN-GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
+ G E + DA E N NA+I Y + D AR++F+AM K++ +WN+MI
Sbjct: 272 IAVFGIGREVHGVIDARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMI 331
Query: 348 TGYAQSGEITHARNLFDRMPQ---------HDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
Y Q+G A ++ RM + HD I++ ++ + +G +DS +L+ M
Sbjct: 332 AVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSM 390
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 42/269 (15%)
Query: 407 SPFTSVLS----TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
SP VL+ C + A++ GK++H +V GF++ ++ N L+ MY KCGS++ A
Sbjct: 54 SPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKS 113
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F ++V SW M+A +A +G DAL L E M GI P+ IT + +L A +
Sbjct: 114 VFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSW 173
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+++G + G + + C++++ + L +A ++ +++ A W AL+
Sbjct: 174 LDRG-RALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIA-WTALV 231
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK- 641
A YA +G + D KV L M GV+
Sbjct: 232 AA----------------------------------YALNGFFRDALKVFLLMTLDGVEP 257
Query: 642 -KVTGYSWLEVQNKVHTFSVGDTLHPEKD 669
+VT + ++V + F +G +H D
Sbjct: 258 TEVTFVTVVDVCADIAVFGIGREVHGVID 286
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 46/253 (18%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL- 123
N+ + + + G +A VF+ PRR+ S+ M++ + NG A + + M +
Sbjct: 96 NLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGIS 155
Query: 124 ---------------VSW-----------------------NVMISGYVRNKSLSAARNL 145
+SW N +I+ Y + +SL+ A ++
Sbjct: 156 PNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSV 215
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLL---AAYVQN 198
FE + R V++W +++ YA NG+ A ++F M +E E+++ ++ A
Sbjct: 216 FESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVF 275
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
G E + ++++ V N+L+ + K +A+ +FD M +D ++WN+MI Y
Sbjct: 276 GIGREVHGVIDARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYG 335
Query: 259 QNNYLAEAQRLFE 271
QN Y +A +++
Sbjct: 336 QNGYGFQALEIYK 348
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 125/322 (38%), Gaps = 78/322 (24%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF---- 115
DI N I + + A VF S+ RS +++ A+++ Y LNG A +VF
Sbjct: 192 DIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMT 251
Query: 116 ----------------------------------DQMPQRDLVSWNVMISGYVRNKSLSA 141
D + ++ N +I+ Y + S
Sbjct: 252 LDGVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDARSEANVCVGNALINMYGKCASPDE 311
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK---------NEISWNGLL 192
AR +F+ M ++D+++WN+M++ Y QNGY A I+ RM E ++I++ G+L
Sbjct: 312 ARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVL 371
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
A G ++++C L+ S SL G + LG A W
Sbjct: 372 FACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDL-LGRAGW--------------- 415
Query: 253 MITGYAQNNYLAEAQRLFEEAPV-KDVFTWTAMVSGYVQNGKVDEARMIFD---AMPEKN 308
L EA+ P D WT ++ + + V+ A D A+ +
Sbjct: 416 ----------LDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTD 465
Query: 309 TVSWNAMIAGYVQTKRM-DMAR 329
+ S+ A+ Y +R DMAR
Sbjct: 466 SGSYVALSNLYALAERWDDMAR 487
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/637 (37%), Positives = 344/637 (54%), Gaps = 79/637 (12%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE------- 272
N+L+ + K R+ DA +FD MP RD +SWN++I G A N +A LF
Sbjct: 23 NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82
Query: 273 -----------APVKDVFTWTA-MVSGY-VQNGKVDEARM-------------------I 300
A V+ +++ +V GY V+ G + E + I
Sbjct: 83 LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC----------------------- 337
F M +KN VSW AMI Y + D LF+ M
Sbjct: 143 FRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESL 202
Query: 338 ---KNVASW-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
K+V + N ++ Y + G + AR +FD + + D ISW +I GY
Sbjct: 203 KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
++S + ++ LF EM R N +L A+L+SLE G+++H V+ G+
Sbjct: 263 SRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
FV NAL+ MY KCG++ A F+ + +K++ISW MIAGY HG G+DA+ LFE MK
Sbjct: 322 FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
GI+PD + IL ACSH+GL ++G +F +M ++ + P KHY CMVDLL G L E
Sbjct: 382 GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKE 441
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAA 621
A ++ MP EPD++ W +LL CR++ +LAEK AE++FE+EPEN G YVLL+N+YA
Sbjct: 442 AYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAE 501
Query: 622 SGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK 681
+ RW V K++ K+ RG+++ TG SW+EV+ K H F + HP+ RI +L+++ +
Sbjct: 502 AERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARR 561
Query: 682 LKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDC 741
++++G K L + + L HS KLAVA+G+L++ GRPIRV KN RVC C
Sbjct: 562 MQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHC 621
Query: 742 HNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
H A K ISK+ GR IILRD+NRFHHF G CSC YW
Sbjct: 622 HEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 190/453 (41%), Gaps = 101/453 (22%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNE 185
N +IS Y ++ + A +F+ MP+RD++SWN+++ G A NG D A +F RM LE E
Sbjct: 23 NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA---------K 236
+ LL+ + AC+ VV S+ G + + LG+A
Sbjct: 83 LDSTTLLS-------VMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSD 135
Query: 237 W-----IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWT----- 282
W IF M ++ VSW MIT Y + + + LF+E ++ DVF T
Sbjct: 136 WRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDA 195
Query: 283 ------------------------------AMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
A++ YV+ G ++EAR IFD + +K+T+SW
Sbjct: 196 FAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISW 255
Query: 313 NAMIAGYVQTKRMDMARELFE-----------AMTCKNVAS------------------- 342
N +I GY ++ + A LF M C A+
Sbjct: 256 NTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRR 315
Query: 343 --------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
N ++ Y + G + AR LFD + + ISW +IAGY G D++ LF
Sbjct: 316 GYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALF 375
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYCK 453
+MK G + + F+++L C++ + G + + A +V + C
Sbjct: 376 EQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCH 435
Query: 454 CGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
G+++EAY E + ++ D W +++ G H
Sbjct: 436 TGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 468
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 170/393 (43%), Gaps = 91/393 (23%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF--------- 146
NA+IS Y + +++ A VFD+MPQRD++SWN +I G N A LF
Sbjct: 23 NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82
Query: 147 -------EMMP-------------------KRDVVS----WNTMLSGYAQNGYADAARRI 176
+MP + ++S N +L Y+ + +I
Sbjct: 83 LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES-------------------------- 210
F M +KN +SW ++ +Y + G ++ LF+
Sbjct: 143 FRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESL 202
Query: 211 KANWEVVSW-------------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
K V + N+LM +VK + +A++IFD + +D +SWNT+I GY
Sbjct: 203 KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Query: 258 AQNNYLAEAQRLFEEAPVK---DVFTWTAMVSGY-----VQNGKVDEARMIFDAMPEKNT 309
+++N EA LF E ++ + T ++ ++ G+ A + E N
Sbjct: 263 SRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNF 322
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-- 367
V+ NA++ YV+ + +AR LF+ +T KN+ SW MI GY G A LF++M
Sbjct: 323 VA-NALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381
Query: 368 --QHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
Q D S++AI+ + SG ++ R F M+
Sbjct: 382 GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMR 414
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G +HG LVK GF A C V NAL+ Y K +E+A F+E+ +D+ISWN++I G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSAC--SHTGLVEKGTEYFYSMNRDYGVIPN 542
+G A+ LF M G + D T++ ++ AC SH + G + YS+ G+I
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFI-GGVVHGYSVRT--GLISE 119
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
+ ++D+ + +NM + + +W A++ + Y + +K A +
Sbjct: 120 TSLGNALLDMYSNCSDWRSTNKIFRNME-QKNVVSWTAMITS---YTRAGHFDKVAGLFQ 175
Query: 603 EMEPEN--AGMYVLLSNLYAASG 623
EM E ++ + S L A +G
Sbjct: 176 EMGLEGIRPDVFAITSALDAFAG 198
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 43/288 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM---PRRSSVSYNAMISGYLLNGQLDPARQVFD 116
D WN I + R+ + A +FN M R ++V+ ++ L+ R++
Sbjct: 251 DTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERGREMHA 310
Query: 117 QMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+R D N ++ YV+ +L AR LF+M+ ++++SW M++GY +G
Sbjct: 311 YAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRD 370
Query: 173 ARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
A +F++M ++ + S++ +L A +G +E F + N + K
Sbjct: 371 AIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIE--------PK 422
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSG 287
K + M+ L EA E P++ D W +++ G
Sbjct: 423 LKH------------------YACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRG 464
Query: 288 --YVQNGKVDE--ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+N K+ E A M+F+ PE NT + + Y + +R + R+L
Sbjct: 465 CRIHRNVKLAEKVAEMVFELEPE-NTGYYVLLANIYAEAERWEAVRKL 511
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/613 (36%), Positives = 359/613 (58%), Gaps = 53/613 (8%)
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEE 272
+S N L+ K+ +L A + + + ++ +I + L++ R + +
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDN 106
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM-----IAGY-------- 319
+D F T ++ Y G VD AR +FD ++ WNA+ +AG+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 320 -------VQTKR-------------------MDMARELFEAMTCK----NVASWNTMITG 349
V++ R + +E+ +T + +V T++
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDM 226
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP- 408
YA+ G + +A +F+ MP + +SW+A+IA YA++G + ++LR F EM E + SP
Sbjct: 227 YARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM--MTETKDSSPN 284
Query: 409 ---FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
SVL CA+LA+LE G+ +HG +++ G ++ V +AL+ MY +CG ++ F+
Sbjct: 285 SVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFD 344
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ D+DV+SWN++I+ Y HG+G+ A+ +FE M G P +T V +L ACSH GLVE+
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G F SM RD+G+ P +HY CMVDLLGRA RLDEA ++++M EP WG+LLG+C
Sbjct: 405 GKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R++G ELAE+A+ +F +EP+NAG YVLL+++YA + W +V +V+ + RG++K+ G
Sbjct: 465 RIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
W+EV+ K+++F D +P ++I+A+L +L +K+ G++ TK VL+++ EEKE
Sbjct: 525 RCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKER 584
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
++ HSEKLA+A+G+++ G PIR+ KNLR+CEDCH K ISK + + I++RD NRFH
Sbjct: 585 IVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFH 644
Query: 766 HFSGGSCSCGDYW 778
F G CSCGDYW
Sbjct: 645 RFKNGVCSCGDYW 657
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 150/370 (40%), Gaps = 61/370 (16%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA----RNLF 146
+ +S N +I G+L A +V Q ++ ++I SLS R++
Sbjct: 45 AKISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHIL 104
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE--- 203
+ +D ++ Y+ G D AR++FD+ ++ WN L A G EE
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 204 ----------------------ACMLFESKA------------------NWEVVSWNSLM 223
AC+ E A N V +L+
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLV 224
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--APVKD---- 277
+ + + A ++F+ MPVR+ VSW+ MI YA+N EA R F E KD
Sbjct: 225 DMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPN 284
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS----WNAMIAGYVQTKRMDMARELFE 333
T +++ +++ R+I + + S +A++ Y + ++D+ + +F+
Sbjct: 285 SVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFD 344
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSED 389
M ++V SWN++I+ Y G A +F+ M + +++ +++ + G E+
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 390 SLRLFIEMKR 399
RLF M R
Sbjct: 405 GKRLFESMWR 414
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 39/295 (13%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--PQRDLVS 125
+ + R GC D A +VFN MP R+ VS++AMI+ Y NG+ A + F +M +D
Sbjct: 224 VDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSP 283
Query: 126 WNV-MISGYVRNKSLSAA------------RNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+V M+S SL+A R L ++P V+S +++ Y + G D
Sbjct: 284 NSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILP---VIS--ALVTMYGRCGKLDV 338
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVK 228
+R+FDRM +++ +SWN L+++Y +G +A +FE + A+ V++ S++G
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 229 QKRLGDAKWIFDRM----PVRDEVS-WNTMITGYAQNNYLAEAQRLFEE---APVKDVFT 280
+ + + K +F+ M ++ +V + M+ + N L EA ++ ++ P V
Sbjct: 399 EGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV-- 456
Query: 281 WTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
W +++ +G V+ A R +F A+ KN ++ + Y + + D + +
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLF-ALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK--- 183
++ Y R + A +F MP R+VVSW+ M++ YA+NG A A R F M+ +
Sbjct: 221 TTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 280
Query: 184 ---NEISWNGLLA-----AYVQNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKRLGD 234
N ++ +L A ++ GR+ +L + V+S +L+ + + +L
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVIS--ALVTMYGRCGKLDV 338
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------APVKDVFTWTAMVS 286
+ +FDRM RD VSWN++I+ Y + Y +A ++FEE PV T+ +++
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPV----TFVSVLG 394
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNV 340
G V+E + +F++M + + + M+ + R+D A ++ + M T
Sbjct: 395 ACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGP 454
Query: 341 ASWNTMITGYAQSGEITHA----RNLFDRMPQH 369
W +++ G + A R LF P++
Sbjct: 455 KVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 335/576 (58%), Gaps = 53/576 (9%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKV---DEARMIFD 302
D + N ++ Y++ +L E+ R + +VF + V+ V D R IF+
Sbjct: 140 DLYTGNALMNMYSKLRFLEESGR--QRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFE 197
Query: 303 AMPEKNTVSWNAMIAG------YVQTKRM---------------------------DMAR 329
MPEK+ VSWN +IAG Y +T RM D++R
Sbjct: 198 MMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISR 257
Query: 330 ELFEAMTCK-------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
E C ++ +++I YA+ + + +F + + D ISW +IIAG
Sbjct: 258 GK-EIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
Q+G ++ LR F +M + F+S++ CA+L +L LGKQLHG + + GF+ F
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIF 376
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
+ ++L+ MY KCG++ A F+ + +D++SW MI G A HG DA+ LFE M+T G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
IK +L+ACSH GLV++ +YF SM RD+G+ P +HY + DLLGRAGRL+EA
Sbjct: 437 IK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+ + M P + W LL ACR++ ++AEK A I E++P N G Y+LL+N+Y+A+
Sbjct: 490 YDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 549
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKL 682
RW + +K R MR G++K SW+EV+NKV+ F GD HP ++I +E L +
Sbjct: 550 RRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELM 609
Query: 683 KQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
+++G+V T V HDV EE+K++++ HSE+LA+ +GI++ PAG IRV KNLRVC DCH
Sbjct: 610 EKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCH 669
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
A K ISKIVGR I++RDN+RFHHF G+CSCGDYW
Sbjct: 670 TATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 34/256 (13%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+ + ++W ++I Y G SL FI M G + + F SVL +CA L
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA--------------------- 460
L LG+ LHG +++VG + + GNAL+ MY K +EE+
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181
Query: 461 -----------YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDIT 509
FE + +KD++SWNT+IAG AR+G ++ L + M +KPD T
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241
Query: 510 MVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+ +L + + +G E + + G+ + + ++D+ + R+ ++ + +
Sbjct: 242 LSSVLPLIAENVDISRGKE-IHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF-TL 299
Query: 570 PFEPDAATWGALLGAC 585
E D +W +++ C
Sbjct: 300 LTERDGISWNSIIAGC 315
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 89/301 (29%)
Query: 83 VFNSMPRRS-SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN----K 137
VF+ M R+ SV +++S D R++F+ MP++DLVSWN +I+G RN +
Sbjct: 170 VFDEMTERTRSVRTVSVLSE-------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEE 222
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQN------------------------------ 167
+L R + K D + +++L A+N
Sbjct: 223 TLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLID 282
Query: 168 GYADAAR-----RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVS 218
YA R R+F + E++ ISWN ++A VQNG +E F +K + S
Sbjct: 283 MYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYS 342
Query: 219 WNSLMGG-----------------------------------FVKQKRLGDAKWIFDRMP 243
++S+M + K + AK IFDRM
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+RD VSW MI G A + +A LFE+ + + A+++ G VDEA F++
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI---KAVLTACSHGGLVDEAWKYFNS 459
Query: 304 M 304
M
Sbjct: 460 M 460
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++++ Y G + A+Q+FD+M RD+VSW MI G + A LFE M +
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI- 437
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN-----GRIEEA 204
+L+ + G D A + F+ M I+ A V + GR+EEA
Sbjct: 438 --KAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 33/258 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------ 149
+++I Y ++ + +VF + +RD +SWN +I+G V+N F M
Sbjct: 278 SSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIK 337
Query: 150 PKRDVVS--------WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
PK S T+ G +GY R FD +N + L+ Y + G I
Sbjct: 338 PKSYSFSSIMPACAHLTTLHLGKQLHGY--ITRNGFD----ENIFIASSLVDMYAKCGNI 391
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
A +F+ ++VSW +++ G + DA +F++M ++T +
Sbjct: 392 RTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETE---GIKAVLTACSHGG 448
Query: 262 YLAEAQRLFEE-------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WN 313
+ EA + F AP + + + + G + G+++EA M T S W
Sbjct: 449 LVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLG--RAGRLEEAYDFICGMHIGPTGSIWA 506
Query: 314 AMIAGYVQTKRMDMAREL 331
+++ K +DMA ++
Sbjct: 507 TLLSACRVHKNIDMAEKV 524
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 324/537 (60%), Gaps = 9/537 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMP 305
+ +++ Y + Y +AQRLF+E P KD+ +W +++SG G + RM ++
Sbjct: 158 DRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 217
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARN 361
+ N V+ ++++ +D + L + ++ N++I Y + G + A
Sbjct: 218 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 277
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+ MP +SW +++ + +GY+E + LF MKR G +++ ++L C +
Sbjct: 278 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 337
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+ +H + + GF A + ALL +Y K G + + FEEI D+D I+W M+AG
Sbjct: 338 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAG 397
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA H G++A+ LF+ M G++ D +T +LSACSH+GLVE+G +YF M+ Y V P
Sbjct: 398 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 457
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
HY+CMVDLLGR+GRL++A L+K+MP EP + WGALLGACR+YG EL ++ AE +
Sbjct: 458 RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 517
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
++P + Y++LSN+Y+A+G W D SKVR M++R + + G S++E NK+H F VG
Sbjct: 518 LSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVG 577
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D LHP D I+ LEEL K+++ G T+ VLHD+ EE K M+ HSEKLA+A+G+L
Sbjct: 578 DQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLL 637
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+G P+ + KNLR+C DCH+ K S + R II+RD+ RFHHF+ G CSC DYW
Sbjct: 638 VTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 183/415 (44%), Gaps = 77/415 (18%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-----LEK 183
++S Y + A+ LF+ MP +D+VSWN+++SG + GY A F RM +
Sbjct: 160 LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 219
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
NE++ +++A G ++E SL G VK G AK +
Sbjct: 220 NEVTLLSVVSACADMGALDEG---------------KSLHGVVVKLGMSGKAKVV----- 259
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
N++I Y + +L A +LFEE PV+ + +W +MV + NG ++ +F+
Sbjct: 260 -------NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNL 312
Query: 304 M------PEKNTVSWNAMIAGYVQTKRMDMARELFEAM-TC---KNVASWNTMITGYAQS 353
M P++ T+ A++ T A + + C ++ ++ YA+
Sbjct: 313 MKRAGINPDQATMV--ALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 370
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + + ++F+ + D I+W A++AGYA ++++LF M + G ++ FT +L
Sbjct: 371 GRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLL 430
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S C++ +E GK+ FE + E Y V+ +
Sbjct: 431 SACSHSGLVEEGKKY--------FEI-----------------MSEVYR-----VEPRLD 460
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++ M+ R G +DA +E +K++ ++P +L AC G VE G E
Sbjct: 461 HYSCMVDLLGRSGRLEDA---YELIKSMPMEPSSGVWGALLGACRVYGNVELGKE 512
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 190/445 (42%), Gaps = 73/445 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-----QRD 122
++ + + G + A +F+ MP + VS+N+++SG G L F +M Q +
Sbjct: 161 VSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPN 220
Query: 123 LVSW-----------------------------------NVMISGYVRNKSLSAARNLFE 147
V+ N +I+ Y + L AA LFE
Sbjct: 221 EVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFE 280
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEE 203
MP R +VSWN+M+ + NGYA+ +F+ M + ++ + LL A G +
Sbjct: 281 EMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQ 340
Query: 204 A----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
A + N +++ +L+ + K RL ++ IF+ + RD ++W M+ GYA
Sbjct: 341 AESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAV 400
Query: 260 NNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---- 311
+ EA +LF+ E D T+T ++S +G V+E + F+ M E V
Sbjct: 401 HACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLD 460
Query: 312 -WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDR---M 366
++ M+ ++ R++ A EL ++M + + W ++ G + + + ++ +
Sbjct: 461 HYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSL 520
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D ++ + Y+ +G D+ ++ MK RL R+P S + + +G
Sbjct: 521 DPSDHRNYIMLSNIYSAAGLWRDASKVRALMKE--RRLTRNPGCSFIEHGNKIHRFVVGD 578
Query: 427 QLHG----------QLVKVGFEAGC 441
QLH +L++ EAGC
Sbjct: 579 QLHPRSDEIHTKLEELIRKIREAGC 603
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 39/269 (14%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S S++ ++ S+ +H +++K + F+G+ L+ MY K G E+A F+E
Sbjct: 120 SIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDE 179
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGLVEK 525
+ +KD++SWN++++G + G+ L F M+T G +P+++T++ ++SAC+ G +++
Sbjct: 180 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 239
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP--------------- 570
G + + G+ +K ++++ G+ G LD A L + MP
Sbjct: 240 GKS-LHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 298
Query: 571 -------------------FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
PD AT ALL AC G AE I NA +
Sbjct: 299 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC-GFNADI 357
Query: 612 YV--LLSNLYAASGRWGDVSKVRLKMRDR 638
+ L NLYA GR + +++DR
Sbjct: 358 IIATALLNLYAKLGRLNASEDIFEEIKDR 386
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/612 (37%), Positives = 358/612 (58%), Gaps = 23/612 (3%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++S Y G+L AR+VFD++P + S+N ++S + R + AR LF +P D
Sbjct: 799 NTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQC 858
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV--QNGR--IEEACML 207
S+N +++ AQ+ A M N S+ L+A ++ R ++ ++
Sbjct: 859 SYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALV 918
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S +V ++L+ + K + +A+ +F+ MP R+ VSWN++IT Y QN + EA
Sbjct: 919 SKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEAL 978
Query: 268 RLF----EEAPVKDVFTWTAMVSGYV-----QNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
LF + V D T +++S + G+ AR++ ++ V NA++
Sbjct: 979 VLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDM 1038
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + R AR +F+ M ++V S ++ITGYA+S + A+ +F +M + + I+W +I
Sbjct: 1039 YAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLI 1098
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF- 437
A YAQ+G E++LRLF+ +KR + +VL+ C N+A L+LG+Q H ++K GF
Sbjct: 1099 AAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFR 1158
Query: 438 -----EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
E+ FVGN+L+ MY K GS+++ FE + +D +SWN MI G+A++G KDAL
Sbjct: 1159 FDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDAL 1218
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
LFE M PD +TM+G+LSAC H+GLVE+G YF SM D+G+IP+ HYTCM+DL
Sbjct: 1219 HLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDL 1278
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG L E + L+K M EPDA W +LLG+CRL+ E+ E AA +FE++P N+G Y
Sbjct: 1279 LGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPY 1338
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSN+YA G+W DV +VR M+ RGV K G SW+E+ KV F D HP K+ I+
Sbjct: 1339 VLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIH 1398
Query: 673 AYLEELEFKLKQ 684
A L ++ ++ +
Sbjct: 1399 AILRIIQMQMSR 1410
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 289/610 (47%), Gaps = 65/610 (10%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
+N AI + G A +F+ MP R S+NA+I+ G A +F M +
Sbjct: 88 FNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGI 147
Query: 124 ----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA-----AR 174
+ ++S L AR L + KRD S N +L + Y + AR
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQS-NVILGTALVDVYGNCFLLADAR 206
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR--- 231
R FD +LE N ISWN ++ Y G + A +F + V + V R
Sbjct: 207 RAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNN 266
Query: 232 -LGDAKWIFD---RMPVRDEVSW-NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
L + + I R V ++++ YA+ + AQ LF AP+KD+ T++VS
Sbjct: 267 ALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVS 326
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL------------FEA 334
G G++ +A+ +F+ M E+N VSWNAM+ GY+++ MD+ L F+A
Sbjct: 327 GLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRS--MDLTGALLLFQQMRQETREFDA 384
Query: 335 MTCKNVASW-----------------------------NTMITGYAQSGEITHARNL--F 363
+T +V S N ++ Y++ G + A L F
Sbjct: 385 ITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLF 444
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
+ + D SW ++I+GY + SE +L +M+ N+S F+S L+ CAN+ L+
Sbjct: 445 EMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSEVTP-NQSTFSSALAACANIFLLK 503
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G Q+H +++ G+E + + L+ MYCKC + + FE +DVI WN+MI G A
Sbjct: 504 QGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCA 563
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
G G+ L LF+ M+ GIK D +T +G L +C G V G YF M D +IP
Sbjct: 564 YSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLM-MDESIIPRI 622
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
+HY CM++LLG+ G + E ++ +++MPFEP A W + CR YG +L E+AA+ I +
Sbjct: 623 EHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCIND 682
Query: 604 MEPENAGMYV 613
P +V
Sbjct: 683 SNPLTPVQFV 692
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 199/456 (43%), Gaps = 93/456 (20%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N ++ + R G A VF+ +P ++ SYNA++S + G+ AR +F +P D
Sbjct: 799 NTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQC 858
Query: 125 SWNVMIS--------------------------GYVRNKSLSA------------ARNLF 146
S+N +I+ Y +LSA L
Sbjct: 859 SYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALV 918
Query: 147 EMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
P +DV + +L YA+ + + ARR+F+ M E+N +SWN L+ Y QNG + EA
Sbjct: 919 SKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEAL 978
Query: 206 MLFES--KANW--EVVSWNSLMGGFV-----KQKRLGDAKWIFDRMPVRDEVSWNTMITG 256
+LF S KA + + V+ S+M ++ R A+ + D V N ++
Sbjct: 979 VLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDM 1038
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ A+ +F+ + V + T++++GY ++ V++A+M+F M EKN ++WN +I
Sbjct: 1039 YAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLI 1098
Query: 317 AGYVQTKRMDMARELFEAM-----------------TCKNVASW---------------- 343
A Y Q + A LF + C NVA
Sbjct: 1099 AAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFR 1158
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
N+++ Y ++G I +F+RM D +SW A+I G+AQ+G ++D+L
Sbjct: 1159 FDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDAL 1218
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
LF M E + VLS C + +E G++
Sbjct: 1219 HLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRR 1254
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 181/415 (43%), Gaps = 38/415 (9%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V + F +VS Y + G++ +AR +FD +P NT S+NA+++ + + R AR LF A
Sbjct: 792 VAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHA 851
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+P D S+ A+IA AQ D+L
Sbjct: 852 -------------------------------IPDPDQCSYNAVIAALAQHSRGADALLFL 880
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M LN F S LS CA G Q+H + K ++G+ALL MY KC
Sbjct: 881 AAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKC 940
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
EEA FE + +++++SWN++I Y ++G +AL+LF SM G PD++T+ ++
Sbjct: 941 EWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVM 1000
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
SAC+ +G + + + + +VD+ + GR A+ + M
Sbjct: 1001 SACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSV 1060
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLK 634
+ + G Y ++ E A V +M +N + +L YA +G + ++ ++
Sbjct: 1061 VSETSLITG----YARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVR 1116
Query: 635 MRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVY 689
++ V T Y++ V N +V D ++ ++ E F + V+
Sbjct: 1117 LKRESVWP-THYTYGNVLNACG--NVADLQLGQQAHVHVLKEGFRFDFGPESDVF 1168
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 179/413 (43%), Gaps = 75/413 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL---------LNGQLDP 110
+I WN IT + +NG AL +F SM + V ++ + G+
Sbjct: 957 NIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVH 1016
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
AR V + D+V N ++ Y + AAR +F+ M R VVS ++++GYA++
Sbjct: 1017 ARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANV 1076
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANW------------- 214
+ A+ +F +M+EKN I+WN L+AAY QNG EEA LF + ++ W
Sbjct: 1077 EDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNAC 1136
Query: 215 -----------------------------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+V NSL+ ++K + D +F+RM R
Sbjct: 1137 GNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 1196
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFE------EAPVKDVFTWTAMVSGYVQNGKVDEARM 299
D VSWN MI G+AQN +A LFE E+P D T ++S +G V+E R
Sbjct: 1197 DNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESP--DSVTMIGVLSACGHSGLVEEGRR 1254
Query: 300 IFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGY--- 350
F +M E + + + MI + + EL + M+ + + W +++
Sbjct: 1255 YFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH 1314
Query: 351 --AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+ GE A LF+ P++ + + YA+ G D R+ MK G
Sbjct: 1315 KNVEMGEWA-AGKLFELDPRNSG-PYVLLSNMYAELGKWADVFRVRSSMKHRG 1365
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 143/670 (21%), Positives = 256/670 (38%), Gaps = 128/670 (19%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSW--------- 126
A VF M R+ VS+NAM++GY+ + L A +F QM Q D ++
Sbjct: 337 AKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTG 396
Query: 127 --------------------------NVMISGYVRNKSLSAARNL--FEMMPKRDVVSWN 158
N ++ Y + L +A L FEM +RD SWN
Sbjct: 397 ILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWN 456
Query: 159 TMLSGYAQNGYADAARRIFDRM---LEKNEISWNGLLAA--------------------- 194
+++SGY ++ ++AA +M + N+ +++ LAA
Sbjct: 457 SLISGYERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKG 516
Query: 195 --------------YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
Y + + + + +FE++ + +V+ WNS++ G + +FD
Sbjct: 517 YEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFD 576
Query: 241 RMPVR----DEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNG 292
M + D V++ + ++ + F +E+ + + + M+ ++G
Sbjct: 577 EMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHG 636
Query: 293 KVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFE-AMTCKNVASWNTMITGY 350
+ E + MP E T W + R R+L E A C N ++ T +
Sbjct: 637 CMVELEDFVEHMPFEPTTAMWLRIF----DCCREYGNRKLGERAAKCINDSNPLTPVQFV 692
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAG-----YAQSGYSEDSLRLFIEMKR----YG 401
A + + N D + + S+++ G ++ G + SL + + YG
Sbjct: 693 AT---VDYESN--DGGREAESTSFSSEGEGCEELPFSLEGEASGSLPAPLTTRPLAIWYG 747
Query: 402 -ERLNRSPFTSVLSTCANLA-------SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
R + F S L A LA +L + H + +K F A F+ N L+ Y +
Sbjct: 748 MARHHHHHFVSHLRASAPLADLLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAYAR 807
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
G + +A F+EI + S+N +++ +AR G DA LF ++ PD + +
Sbjct: 808 LGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIP----DPDQCSYNAV 863
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIP----NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
++A + + +M+ D V+ S C + R G + L+
Sbjct: 864 IAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGV--QVHALVSKS 921
Query: 570 PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
P D ALL +Y K E E+A V M N + L Y +G G+
Sbjct: 922 PHAKDVYIGSALLD---MYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEAL 978
Query: 630 KVRLKMRDRG 639
+ + M G
Sbjct: 979 VLFVSMMKAG 988
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
F+ N + CGSV +A F+ + +D SWN +I +R G +AL LF +M ++
Sbjct: 86 FLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSL 145
Query: 502 GIKPDDITMVGILSACSHT-GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
GI+P D TM +LS C+ L + + RD+ N T +VD+ G L
Sbjct: 146 GIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQ--SNVILGTALVDVYGNCFLLA 203
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+A+ ++ EP+A +W ++ R Y + + A ++ F M
Sbjct: 204 DARRAFDDI-LEPNAISWNVIV---RRYHLAGMGDMAVDMFFRM 243
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/706 (36%), Positives = 385/706 (54%), Gaps = 107/706 (15%)
Query: 161 LSGYAQNGYADAARRIF---DRMLEKNEISWNGLLAAY----------VQNGRIEEACML 207
+ G + + + A ++F + M++ + S+ LL+++ ++ GR ++
Sbjct: 1 MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVI 60
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
++ V N L+ + K + DA+ +F M +D VSWN+MITG QN EA
Sbjct: 61 TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAV 120
Query: 268 RLFEE--------------------APVK-------------------DVFTWTAMVSGY 288
++ A +K +V A+++ Y
Sbjct: 121 ERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY 180
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC----------- 337
+ G ++E R IF +MPE + VSWN++I ++R L EA+ C
Sbjct: 181 AETGYLNECRKIFSSMPEHDQVSWNSIIGALASSER-----SLPEAVACFLNALRAGQKL 235
Query: 338 ------------------------------KNVA----SWNTMITGYAQSGEITHARNLF 363
N+A + N +I Y + GE+ +F
Sbjct: 236 NRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIF 295
Query: 364 DRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
RM + D ++W ++I+GY + +L L M + G+RL+ + +VLS A++A+L
Sbjct: 296 SRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL 355
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
E G ++H V+ E+ VG+AL+ MY KCG ++ A F + ++ SWN+MI+GY
Sbjct: 356 ERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGY 415
Query: 483 ARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
ARHG G++AL LF +MK G PD +T VG+LSACSH GL+E+G ++F SM+ YG+ P
Sbjct: 416 ARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAP 475
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC-RLYG-KTELAEKAAE 599
+H++CM DLLGRAG LD+ ++ + MP +P+ W +LGAC R G K EL +KAAE
Sbjct: 476 RIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAE 535
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
++F++EPENA YVLL N+YAA GRW D+ K R KM+D VKK GYSW+ +++ VH F
Sbjct: 536 MLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFV 595
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD HP+ D IY L+EL K++ G+V T L+D+ +E KE +L YHSEKLAVA+
Sbjct: 596 AGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFV 655
Query: 720 ILSIPAGR-PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
+ + + PIR+MKNLRVC DCH+A K+ISKI GR IILRD+NR+
Sbjct: 656 LAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 129/531 (24%), Positives = 216/531 (40%), Gaps = 113/531 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D+ + N + + + G A VF M + SVS+N+MI+G NG A + +
Sbjct: 66 DFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQS 125
Query: 118 MPQRDLVSWN-VMISGYVRNKSLSAAR-------NLFEMMPKRDVVSWNTMLSGYAQNGY 169
M + +++ + +IS SL A+ ++ +V N +++ YA+ GY
Sbjct: 126 MRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 185
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGR-IEE--ACMLFESKANW------------ 214
+ R+IF M E +++SWN ++ A + R + E AC L +A
Sbjct: 186 LNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLS 245
Query: 215 -------------------------EVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEV 248
E + N+L+ + K + + IF RM RD+V
Sbjct: 246 AVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDV 305
Query: 249 SWNTMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMI---- 300
+WN+MI+GY N LA+A L + D F + ++S + ++ +
Sbjct: 306 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACS 365
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
A E + V +A++ Y + R+D A F M +N SWN+MI+GYA+ G+ A
Sbjct: 366 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 425
Query: 361 NLFDRM-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK--------------- 398
LF M P H +++ +++ + +G E+ + F M
Sbjct: 426 KLFANMKLDGQTPPDH--VTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCM 483
Query: 399 -----RYGER------LNRSPFT-------SVLSTC--ANLASLELGKQLHGQLVKVGFE 438
R GE +++ P +VL C AN ELGK+ L ++ E
Sbjct: 484 ADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPE 543
Query: 439 AG---CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV-----ISWNTMIAG 481
+GN MY G E+ A +++ D DV SW TM G
Sbjct: 544 NAVNYVLLGN----MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDG 590
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/758 (33%), Positives = 413/758 (54%), Gaps = 47/758 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + ++ R+G D A +F S+ ++++V+ N +I G + + A ++F +
Sbjct: 309 DLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF--VG 366
Query: 120 QRDLVSWN-----VMISGY----VRNKSLSAARNLFEMMPKRDVVSW-----NTMLSGYA 165
R+ V N V++S + + L R + M + + N +++ YA
Sbjct: 367 TRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYA 426
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-------SKANWEVVS 218
+ G ++A +IF M + ISWN +++A QNG EEA M + S +N+ ++S
Sbjct: 427 KCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALIS 486
Query: 219 WNSLMGGFV-----KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
S G +Q KW D D N ++ Y + +++ ++F
Sbjct: 487 SLSSCAGLKLLTAGQQVHCDAVKWGLDL----DTSVSNVLVKMYGECGAMSDYWKVFNSM 542
Query: 274 PVKDVFTWTAMVSGYVQN-GKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMA 328
D +W M+ + + E +F+ M N V++ ++A +++
Sbjct: 543 AEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELG 602
Query: 329 RELFEAMTCKNVASWNT----MITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQ 383
+++ A+ V N +I+ YA+SG++ +LF M + D ISW ++I+GY
Sbjct: 603 KQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIY 662
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G ++++ M G+ ++ F+ +L+ CA++A+LE G +LH ++ E+ V
Sbjct: 663 NGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVV 722
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
+AL+ MY KCG V+ A F + ++ SWN+MI+GYARHG G+ A+ +FE M
Sbjct: 723 ESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRE 782
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
PD +T V +LSACSH GLVE+G EYF M D+G++P +HY+C++DLLGRAG++D+ +
Sbjct: 783 SPDHVTFVSVLSACSHAGLVERGLEYF-EMMPDHGILPQIEHYSCVIDLLGRAGKIDKIK 841
Query: 564 NLMKNMPFEPDAATWGALLGACRLY---GKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
++ MP EP+A W +L ACR +L +A+ V+ E+EP+N YVL SN +A
Sbjct: 842 EYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHA 901
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
A+G W D +K R MR KK G SW+ + + VHTF GD HP IY L L
Sbjct: 902 ATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQ 961
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
++ G+V T+ L+D+ EE KE +L YHSEKLA+A+ +L+ + PIR+MKNLRVC D
Sbjct: 962 NIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRVCGD 1020
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH A ++IS+++ R IILRD+ RFHHF G CSCGDYW
Sbjct: 1021 CHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/564 (23%), Positives = 247/564 (43%), Gaps = 104/564 (18%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
DL N +++ Y + L+AA +F+ MP+R+ VSW ++SGY +G A+ A R+F ML
Sbjct: 95 DLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAML 154
Query: 182 EK-------NEISWNGLLAAYVQNG--RIEEACMLFESKANWEVVSWNSLMGGFVKQK-- 230
+ ++ LL A G R+ A + + E S ++ +
Sbjct: 155 REVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGS 214
Query: 231 -RLGD---AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA----------PVK 276
+G A+ +FD P+RD ++WN +++ YA+ +A LF++ P +
Sbjct: 215 CTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTE 274
Query: 277 ----------------------------------DVFTWTAMVSGYVQNGKVDEARMIFD 302
D++ +A+VS + ++G DEA+ IF
Sbjct: 275 HTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFL 334
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELF------------------------------ 332
++ +KN V+ N +I G V+ + A ++F
Sbjct: 335 SLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEG 394
Query: 333 -------------EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+T +A N ++ YA+ G I A +F M D ISW II+
Sbjct: 395 LRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIIS 454
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
Q+G E+++ + M++ + S LS+CA L L G+Q+H VK G +
Sbjct: 455 ALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDL 514
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFG-KDALMLFESM 498
V N L+ MY +CG++ + + F + + D +SWNTM+ A + + +F +M
Sbjct: 515 DTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNM 574
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
G+ P+ +T + +L+A S ++E G + ++ + +GV+ ++ ++ ++G
Sbjct: 575 MRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMK-HGVMEDNVVDNALISCYAKSGD 633
Query: 559 LDEAQNLMKNMPFEPDAATWGALL 582
+ ++L NM DA +W +++
Sbjct: 634 MGSCEHLFTNMSDRRDAISWNSMI 657
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 200/473 (42%), Gaps = 100/473 (21%)
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
L + N ++ N L+ + K RL A +FD MP R+ VSW +++GY + EA
Sbjct: 87 LIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEA 146
Query: 267 QRLFEEAPVKDV--------FTWTAMVSGYVQNGKVDEA-------RMIFDAMPEKNTVS 311
R+F A +++V FT+ ++ Q+G D ++ NT
Sbjct: 147 FRVF-RAMLREVQAGCRPTSFTFGTLLRA-CQDGGPDRLGFAVQVHGLVSKTEYASNTTV 204
Query: 312 WNAMIA--GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
NA+I+ G +A+ +F+ +++ +WN +++ YA+ G++ LF M +
Sbjct: 205 CNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRG 264
Query: 370 D-------------------------------CISW-------------AAIIAGYAQSG 385
D + W +A+++ +A+ G
Sbjct: 265 DSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHG 324
Query: 386 YSEDSLRLFIEMKR--------------------------YGER----LNRSPFTSVLST 415
++++ +F+ +K+ G R +N + +LS
Sbjct: 325 LTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSA 384
Query: 416 CANLA----SLELGKQLHGQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
A + L +G+ +HG +++ G + V N L+ MY KCG++E A F+ +
Sbjct: 385 LAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEAT 444
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D ISWNT+I+ ++G ++A+M + M+ I P + ++ LS+C+ L+ G +
Sbjct: 445 DRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVH 504
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+ +G+ ++ +V + G G + + + +M E D +W ++G
Sbjct: 505 CDAVK-WGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA-EHDEVSWNTMMG 555
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 173/408 (42%), Gaps = 67/408 (16%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D I N + + + G +SA +F M +S+N +IS NG + A +
Sbjct: 412 DLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSL 471
Query: 118 MPQR------------------------------DLVSW---------NVMISGYVRNKS 138
M Q D V W NV++ Y +
Sbjct: 472 MRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGA 531
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA-DAARRIFDRMLE----KNEISWNGLLA 193
+S +F M + D VSWNTM+ A + ++F+ M+ N++++ LLA
Sbjct: 532 MSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLA 591
Query: 194 AY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDE 247
A ++ G+ A ++ VV N+L+ + K +G + +F M RD
Sbjct: 592 ALSPLSVLELGKQVHAAVMKHGVMEDNVVD-NALISCYAKSGDMGSCEHLFTNMSDRRDA 650
Query: 248 VSWNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI--- 300
+SWN+MI+GY N L EA + + D T++ +++ ++ +
Sbjct: 651 ISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAF 710
Query: 301 -FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+ E + V +A++ Y + R+D A +LF +MT +N SWN+MI+GYA+ G A
Sbjct: 711 GIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKA 770
Query: 360 RNLFDRM------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
+F+ M P H +++ ++++ + +G E L F M +G
Sbjct: 771 IEIFEEMLRSRESPDH--VTFVSVLSACSHAGLVERGLEYFEMMPDHG 816
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 18/286 (6%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR---Y 400
N ++ YA+ + A +FD MP+ + +SW +++GY G +E++ R+F M R
Sbjct: 100 NHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQA 159
Query: 401 GERLNRSPFTSVLSTCANLASLELG--KQLHGQLVKVGFEAGCFVGNALLVMY--CKCGS 456
G R F ++L C + LG Q+HG + K + + V NAL+ MY C G
Sbjct: 160 GCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGP 219
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK----TVGIKPDDITMVG 512
A F+ +D+I+WN +++ YA+ G LF+ M+ + ++P + T
Sbjct: 220 PILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGS 279
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+++A S + + G + + +V R G DEA+++ ++ +
Sbjct: 280 LITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQK 339
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE---NAGMYVLL 615
G ++G R + +E+A ++ NA YV+L
Sbjct: 340 NAVTLNGLIVGLVR----QDFSEEAVKIFVGTRNTVDVNADTYVVL 381
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+ LH +L+K G F+ N L+ Y K + A F+E+ +++ +SW +++GY H
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 486 GFGKDALMLFESM---KTVGIKPDDITMVGILSACSHT------------GLVEKGTEYF 530
G ++A +F +M G +P T +L AC GLV K TEY
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSK-TEYA 199
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ +I S + +C V G AQ + P D TW AL+
Sbjct: 200 SNTTVCNALI--SMYGSCTV------GPPILAQRVFDGTPIR-DLITWNALM 242
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/671 (34%), Positives = 365/671 (54%), Gaps = 38/671 (5%)
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAARR 175
Q+ L S+ ++ +N + + L M+ ++ ++ YA G R+
Sbjct: 15 QQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRK 74
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+FD M ++N + +N ++ +YV N R ++ ++F N GGF
Sbjct: 75 VFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVN----------GGFRPDNY--TY 122
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD 295
+ + + + +I G + + ++F +++ Y + G +
Sbjct: 123 PCVLKACSCSENLRYGLLIHG-----------DVLKVGLDFNLFVGNGLIAMYGKCGCLF 171
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT--------CKNVASWNTMI 347
EAR +FD M K+ VSWN+M+AGY R D A E+ M C +AS +
Sbjct: 172 EARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGC-TMASLMPAV 230
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
S + + +F + + + ISW +I Y ++ ++ L+++M++ +
Sbjct: 231 AN-TSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAI 289
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F SVL C +L++L LG+++H + K + N+L+ MY +CG +++A F+ +
Sbjct: 290 TFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRM 349
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+DV SW ++I+ Y G G +A+ LF M G PD I V ILSACSH+GL+++G
Sbjct: 350 KFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGR 409
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
YF M DY + P +HY C+VDLLGRAGR+DEA N++K MP EP+ W LL +CR+
Sbjct: 410 IYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRV 469
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYS 647
+ ++ AA+ + ++ PE +G YVLLSN+YA +GRW +V+++R M+ + ++K G S
Sbjct: 470 FTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGIS 529
Query: 648 WLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHML 707
+E+ N+VHTF GDT HP+ IY L L K+K+ G+V T LHDV EE+KE L
Sbjct: 530 NVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHL 589
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
HSEKLA+ + +L+ + IR+ KNLRVC DCH A K ISKIV R II+RD NRFHHF
Sbjct: 590 AVHSEKLAIVFALLNTQEYQ-IRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHF 648
Query: 768 SGGSCSCGDYW 778
G CSCGDYW
Sbjct: 649 KDGVCSCGDYW 659
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 189/430 (43%), Gaps = 70/430 (16%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN--------------------- 136
++ Y G+ R+VFD+M R++V +NVMI YV N
Sbjct: 59 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118
Query: 137 --------KSLSAARNL-FEMMPKRDVVSW---------NTMLSGYAQNGYADAARRIFD 178
K+ S + NL + ++ DV+ N +++ Y + G ARR+FD
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGF--VKQKRL 232
M+ K+ +SWN ++A Y N R ++A + ++ + + SLM + +
Sbjct: 179 EMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV 238
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
+ IF + ++ +SWN MI Y +N+ P + V + M V+
Sbjct: 239 LYVEKIFVNLERKNLISWNVMIRVYMKNSL-----------PTQAVDLYLQMEKCRVEPD 287
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
+ A + A + + + I YV+ K++ C N+ N++I YA+
Sbjct: 288 AITFAS-VLPACGDLSALLLGRRIHEYVEKKKL-----------CPNLLLENSLIDMYAR 335
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G + A+ +FDRM D SW ++I+ Y +G +++ LF EM G+ + F ++
Sbjct: 336 CGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAI 395
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYCKCGSVEEAYHAFEEI-VDK 470
LS C++ L+ G+ Q+ A LV + + G V+EAY+ +++ ++
Sbjct: 396 LSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEP 455
Query: 471 DVISWNTMIA 480
+ W T+++
Sbjct: 456 NERVWATLLS 465
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 192/440 (43%), Gaps = 39/440 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQV--- 114
D+++ N I + + GC A VF+ M + VS+N+M++GY N + D A ++
Sbjct: 151 DFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICRE 210
Query: 115 ---FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ Q P ++ + ++++ +F + +++++SWN M+ Y +N
Sbjct: 211 MEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPT 270
Query: 172 AARRIFDRM----LEKNEISWN------GLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
A ++ +M +E + I++ G L+A + RI E + + K ++ NS
Sbjct: 271 QAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHE--YVEKKKLCPNLLLENS 328
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKD 277
L+ + + L DAK +FDRM RD SW ++I+ Y A LF E D
Sbjct: 329 LIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPD 388
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELF 332
+ A++S +G +DE R+ F M + ++ + ++ + R+D A +
Sbjct: 389 SIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNII 448
Query: 333 EAMTCK-NVASWNTMITGYAQSGE----ITHARNLFDRMPQHDCISWAAIIAG-YAQSGY 386
+ M + N W T+++ I A NL P+ + +++ YA++G
Sbjct: 449 KQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQS--GYYVLLSNIYAKAGR 506
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
++ + MKR +++ ++P S + + + G H Q ++ E G V
Sbjct: 507 WKEVTEIRSVMKR--KKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKM 564
Query: 447 LLVMYCKCGSVEEAYHAFEE 466
+ Y + A H EE
Sbjct: 565 KELGYVP--ETDSALHDVEE 582
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/756 (33%), Positives = 384/756 (50%), Gaps = 105/756 (13%)
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P L N +++ Y R AR L + MP+R+ VS+N ++ Y++ G A +
Sbjct: 39 PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98
Query: 179 RM----LEKNEISWNGLL-----AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R ++ + S+ L A +++ GR A + + ++ VS NSL+ + K
Sbjct: 99 RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVS-NSLVSMYSKC 157
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------------------- 270
+G+A+ +FD RD+VSWN++++GY + E R+F
Sbjct: 158 GEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVI 217
Query: 271 ----------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ DVF +AM+ Y + G + EA +F ++ E N
Sbjct: 218 KCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM---------------ITGYAQS 353
V +N MIAG+ +T+ + EA+T + M + GY +
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337
Query: 354 GEITHARNL------------------------------FDRMPQHDCISWAAIIAGYAQ 383
G+ H + + F P+HD ++W A+++G Q
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+ E +L LF E G + + +SV++ CA+LA G+Q+ K GF+ +
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVM 457
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
GN+ + MY + G V+ A F+E+ DV+SW+ +I+ +A+HG +DAL F+ M +
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKV 517
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
P++IT +G+L+ACSH GLV++G Y+ +MN+DYG+ P KH TC+VDLLGRAGRL +A+
Sbjct: 518 VPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ N F D W +LL +CR++ E + A I E+EP ++ YV+L N+Y +G
Sbjct: 578 AFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAG 637
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
SK R M+ RGVKK G SW+E++ VH+F GD HPE IY LEE+ +++
Sbjct: 638 ELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIE 697
Query: 684 QDGFVYSTKLVLHDVGEEEKEH-MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
KL D ++E ++ HSEKLAVA G++ +P PIRVMKNLRVC DCH
Sbjct: 698 --------KLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCH 749
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ +K ISK R IILRD RFHHF GSCSC DYW
Sbjct: 750 STMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 187/435 (42%), Gaps = 85/435 (19%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
H+R G AL + + + VS N+++S Y G++ AR+VFD +RD VSWN ++
Sbjct: 124 HLRAGRAVHALAILDGLSSGVFVS-NSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLV 182
Query: 131 SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY---AQNGYADAARRIFDRM------- 180
SGYVR + +F MM +R + N+ G +G D I + +
Sbjct: 183 SGYVRAGAREEMVRVFAMM-RRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKA 241
Query: 181 -LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL------G 233
L+ + + ++ Y + G + EA LF S VV +N+++ GF + + +
Sbjct: 242 GLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301
Query: 234 DAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL--------FEEAPVKDVFTW 281
+A ++ + R E ++++++ YL +++ F+E D F
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQE----DDFIG 357
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF--------- 332
+A++ Y +G +++ F + P+ + V+W AM++G VQ + + A LF
Sbjct: 358 SALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLK 417
Query: 333 ----------------------EAMTCKNVAS--------WNTMITGYAQSGEITHARNL 362
E + C S N+ + YA+SG++ A
Sbjct: 418 PDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRR 477
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F M HD +SW+A+I+ +AQ G + D+L F EM N F VL+ C+
Sbjct: 478 FQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACS----- 532
Query: 423 ELGKQLHGQLVKVGF 437
HG LV G
Sbjct: 533 ------HGGLVDEGL 541
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 59/309 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF------------ 115
I + +GC + F S P+ V++ AM+SG + N + A +F
Sbjct: 361 IDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDL 420
Query: 116 -------------------DQMP--------QRDLVSWNVMISGYVRNKSLSAARNLFEM 148
+Q+ R V N + Y R+ + AA F+
Sbjct: 421 FTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQE 480
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA 204
M DVVSW+ ++S +AQ+G A A FD M++ NEI++ G+L A G ++E
Sbjct: 481 MESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEG 540
Query: 205 CMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAK-WIFDRMPVRDEVSWNTMITGYA 258
+E+ + + ++ + RL DA+ +I + + D V W +++
Sbjct: 541 LRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCR 600
Query: 259 QNNYLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----- 309
+ L Q R+ E P ++ + + Y+ G++ A D M ++
Sbjct: 601 IHRDLERGQLVANRIMELEPTSSA-SYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPG 659
Query: 310 VSWNAMIAG 318
+SW + G
Sbjct: 660 LSWIELKCG 668
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 111/303 (36%), Gaps = 70/303 (23%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL---------- 103
K D D+ + I + + G A +F S+ + V +N MI+G+
Sbjct: 240 KAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEV 299
Query: 104 -------------------------------LNGQLDPARQVFDQMP----QRDLVSWNV 128
L G L+ +Q+ Q+ Q D +
Sbjct: 300 ASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSA 359
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+I Y + + F PK D+V+W M+SG QN + A +F +E
Sbjct: 360 LIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLF------HESLG 413
Query: 189 NGLLAAYVQNGRIEEACM-LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
GL + AC L ++A ++ + + G FDR V
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG--------------FDRFTVMG- 458
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
N+ + YA++ + A R F+E DV +W+A++S + Q+G +A FD M +
Sbjct: 459 ---NSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDA 515
Query: 308 NTV 310
V
Sbjct: 516 KVV 518
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/608 (37%), Positives = 343/608 (56%), Gaps = 49/608 (8%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPV 275
N L+ K L A + P + ++ +I AQ N L++ +RL
Sbjct: 51 NQLIQSLCKGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFD 110
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG-------------YVQT 322
+D F T +++ Y + G +D AR +FD E+ WNA+ YVQ
Sbjct: 111 QDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQM 170
Query: 323 KRMDMARELFEAM----TC--------------------------KNVASWNTMITGYAQ 352
+ + + F C N+ T++ YA+
Sbjct: 171 NWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAK 230
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF--IEMKRYGERLNRSPFT 410
G +++A ++F MP + +SW+A+IA +A++ +L LF + ++ + N
Sbjct: 231 FGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMV 290
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+VL CA LA+LE GK +HG +++ G ++ V NAL+ MY +CG + F+ + ++
Sbjct: 291 NVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNR 350
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
DV+SWN++I+ Y HGFGK A+ +FE+M G P I+ + +L ACSH GLVE+G F
Sbjct: 351 DVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILF 410
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
SM Y + P +HY CMVDLLGRA RLDEA L+++M FEP WG+LLG+CR++
Sbjct: 411 ESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCN 470
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
ELAE+A+ ++FE+EP NAG YVLL+++YA + W + V + RG++K+ G SW+E
Sbjct: 471 VELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIE 530
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
V+ KV++F D +P+ + I+A L +L ++K G+V T +VL+D+ EEEKE ++ H
Sbjct: 531 VKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGH 590
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SEKLAVA+G+++ G IR+ KNLR+CEDCH K ISK R I++RD NRFHHF G
Sbjct: 591 SEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDG 650
Query: 771 SCSCGDYW 778
CSCGDYW
Sbjct: 651 VCSCGDYW 658
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 145/378 (38%), Gaps = 64/378 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS----AARNLFEMMPK 151
N +I G L A + P ++ +I + SLS R L
Sbjct: 51 NQLIQSLCKGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFD 110
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
+D +++ Y + G D AR++FD E+ WN L A G +E L+ +
Sbjct: 111 QDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLY-VQ 169
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
NW + + FV K ++ + E+ + + GY N
Sbjct: 170 MNWIGIPSDRFTYTFV-LKACVVSELSVSPLQKGKEIHAHILRHGYEAN----------- 217
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+ T ++ Y + G V A +F AMP KN VSW+AMIA + + + A EL
Sbjct: 218 ------IHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALEL 271
Query: 332 FEAM-------------------TCKNVAS----------------------WNTMITGY 350
F+ M C +A+ N +IT Y
Sbjct: 272 FQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMY 331
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ GEI + +FD M D +SW ++I+ Y G+ + ++++F M G + F
Sbjct: 332 GRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFI 391
Query: 411 SVLSTCANLASLELGKQL 428
+VL C++ +E GK L
Sbjct: 392 TVLGACSHAGLVEEGKIL 409
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+ ++V + +++ +I GY+L LD V N +I+ Y R
Sbjct: 288 TMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVL-----------NALITMYGRCGE 336
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE----ISWNGLLAA 194
+ + +F+ M RDVVSWN+++S Y +G+ A +IF+ M+ + IS+ +L A
Sbjct: 337 ILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGA 396
Query: 195 YVQNGRIEEACMLFES 210
G +EE +LFES
Sbjct: 397 CSHAGLVEEGKILFES 412
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 33/295 (11%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE--MMPKRD 153
++ Y G + A VF MP ++ VSW+ MI+ + +N+ A LF+ M+ D
Sbjct: 222 TTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHD 281
Query: 154 VVSWNTMLSGYAQNGYADAARR--------IFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
V + + Q AA I R L+ N L+ Y + G I
Sbjct: 282 SVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQ 341
Query: 206 MLFESKANWEVVSWNSL-----MGGFVKQKRLGDAKWIFDRMPVRDE----VSWNTMITG 256
+F++ N +VVSWNSL M GF K+ A IF+ M + +S+ T++
Sbjct: 342 RVFDNMKNRDVVSWNSLISIYGMHGFGKK-----AIQIFENMIHQGSSPSYISFITVLGA 396
Query: 257 YAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEA-RMIFDAMPEKNTV 310
+ + E + LFE K + + MV + ++DEA ++I D E
Sbjct: 397 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPT 456
Query: 311 SWNAMIAG---YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
W +++ + + + A L + +N ++ + YA++ + A+++
Sbjct: 457 VWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSV 511
>gi|302784086|ref|XP_002973815.1| hypothetical protein SELMODRAFT_100620 [Selaginella moellendorffii]
gi|300158147|gb|EFJ24770.1| hypothetical protein SELMODRAFT_100620 [Selaginella moellendorffii]
Length = 564
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/552 (36%), Positives = 320/552 (57%), Gaps = 3/552 (0%)
Query: 75 GCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV 134
G D A F+ + ++ S+N +I Y NGQ+ AR FD+MP R V+WN +++ Y
Sbjct: 6 GSLDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPARTSVTWNTLLTAYA 65
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
R + + LF+ MP+R +V+WN+++ YA NG A+ +FD M E+ SWN ++
Sbjct: 66 RAGHMPESELLFKNMPERGIVTWNSIVEAYAHNGLLARAKTLFDAMPERTAYSWNIMIQG 125
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
YV N R + A FE SWN+++ G V L +A+ +F+ P RD + NTM+
Sbjct: 126 YVDNSRFQSALAAFERMPQRSTASWNTVLAGLVAAGHLREAERVFEATPHRDLHAHNTMV 185
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
+ Y + L A+ +F++ P ++ W A++ YVQNG++ A+ FD P ++ SWNA
Sbjct: 186 SAYCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNGQLSTAKATFDVSPCRDVASWNA 245
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
M+ G+ + ++ A LF+ M ++V S ++ YA+ G IT AR LFD +P D I+W
Sbjct: 246 MMQGFAEEGQLQDAELLFQRMPKRDVVSATALVVAYARHGHITQARALFDGLPVRDTIAW 305
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
A+IA Y Q+G + D+L LF M L+ + +S L CA LA+L GK +H ++
Sbjct: 306 NAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSALDACATLAALREGKLIHSSILH 365
Query: 435 VG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
F + V +L+ MY +C + EA AF+ + +DV WNTM+A Y+++G +++L
Sbjct: 366 SELFHSNTIVATSLITMYARCARLCEAKRAFDGLTKRDVPCWNTMVAAYSQNGLFQESLE 425
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN--RDYGVIPNSKHYTCMVD 551
+F +M+ G KP + + IL++CSH GL+ + YF ++ D+GV+P HY C++D
Sbjct: 426 IFRTMEVEGHKPQSASFICILTSCSHGGLLTEALWYFTALQLVEDHGVVPTVDHYICIID 485
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LL R G L +A+ L+ MPFEPD+ W ALLG C+ + + A+ +F+++P +
Sbjct: 486 LLARIGWLHQAEELLNTMPFEPDSVAWMALLGGCKGQNDVQTGARVAKHVFQLQPRTPAL 545
Query: 612 YVLLSNLYAASG 623
YVLLSN +A++
Sbjct: 546 YVLLSNTHASNA 557
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 231/468 (49%), Gaps = 35/468 (7%)
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLM 223
Y G D AR FDR+ N SWN L+ AY QNG+I A F+ V+WN+L+
Sbjct: 2 YGACGSLDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPARTSVTWNTLL 61
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTA 283
+ + + +++ +F MP R V+WN+++ YA N LA A+ LF+ P + ++W
Sbjct: 62 TAYARAGHMPESELLFKNMPERGIVTWNSIVEAYAHNGLLARAKTLFDAMPERTAYSWNI 121
Query: 284 MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW 343
M+ GYV N + A F+ MP+++T SWN ++AG V + A +FEA +++ +
Sbjct: 122 MIQGYVDNSRFQSALAAFERMPQRSTASWNTVLAGLVAAGHLREAERVFEATPHRDLHAH 181
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
NTM++ Y ++G + AR++FD++P + + W A++ Y Q+G +
Sbjct: 182 NTMVSAYCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNG-----------------Q 224
Query: 404 LNRSPFTSVLSTCANLAS---LELGKQLHGQL--VKVGFE----AGCFVGNALLVMYCKC 454
L+ + T +S C ++AS + G GQL ++ F+ AL+V Y +
Sbjct: 225 LSTAKATFDVSPCRDVASWNAMMQGFAEEGQLQDAELLFQRMPKRDVVSATALVVAYARH 284
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G + +A F+ + +D I+WN MIA Y + G DAL LF+ M + D ++ L
Sbjct: 285 GHITQARALFDGLPVRDTIAWNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSAL 344
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
AC+ + +G S+ N+ T ++ + R RL EA+ + + D
Sbjct: 345 DACATLAALREGKLIHSSILHSELFHSNTIVATSLITMYARCARLCEAKRAFDGLT-KRD 403
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLSN 617
W ++ A Y + L +++ E+ ME P++A +L++
Sbjct: 404 VPCWNTMVAA---YSQNGLFQESLEIFRTMEVEGHKPQSASFICILTS 448
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 163/342 (47%), Gaps = 21/342 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N ++ + + G A VF+ +P R+ V +NA++ Y+ NGQL A+ FD P
Sbjct: 177 DLHAHNTMVSAYCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNGQLSTAKATFDVSP 236
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
RD+ SWN M+ G+ L A LF+ MPKRDVVS ++ YA++G+ AR +FD
Sbjct: 237 CRDVASWNAMMQGFAEEGQLQDAELLFQRMPKRDVVSATALVVAYARHGHITQARALFDG 296
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDA 235
+ ++ I+WN ++AAY Q G +A LF+ + S +S + L +
Sbjct: 297 LPVRDTIAWNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSALDACATLAALREG 356
Query: 236 KWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
K I + + NT +IT YA+ L EA+R F+ +DV W MV+ Y Q
Sbjct: 357 KLIHSSILHSELFHSNTIVATSLITMYARCARLCEAKRAFDGLTKRDVPCWNTMVAAYSQ 416
Query: 291 NGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM-------TCKN 339
NG E+ IF M + + S+ ++ + A F A+
Sbjct: 417 NGLFQESLEIFRTMEVEGHKPQSASFICILTSCSHGGLLTEALWYFTALQLVEDHGVVPT 476
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
V + +I A+ G + A L + MP + D ++W A++ G
Sbjct: 477 VDHYICIIDLLARIGWLHQAEELLNTMPFEPDSVAWMALLGG 518
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 49/190 (25%)
Query: 450 MYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG---FGKDAL-------------- 492
MY CGS+++A AF+ + + SWN +I YA++G +DA
Sbjct: 1 MYGACGSLDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPARTSVTWNTL 60
Query: 493 --------------MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+LF++M GI +T I+ A +H GL+ + F +M
Sbjct: 61 LTAYARAGHMPESELLFKNMPERGI----VTWNSIVEAYAHNGLLARAKTLFDAM----- 111
Query: 539 VIPNSKHYTCMVDLLGRA--GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
P Y+ + + G R A + MP + A+W +L G AE+
Sbjct: 112 --PERTAYSWNIMIQGYVDNSRFQSALAAFERMP-QRSTASWNTVLAGLVAAGHLREAER 168
Query: 597 AAEVIFEMEP 606
+FE P
Sbjct: 169 ----VFEATP 174
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/720 (33%), Positives = 387/720 (53%), Gaps = 31/720 (4%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN----L 145
+ +V +N ++ G+ D A F +M R + + ++ + +AAR +
Sbjct: 132 KDAVLWNKQVAMLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKAV 191
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYAD-----AARRIFDRMLEK-NEISWNGLLAAYVQNG 199
K +V + ++ G+ YA+ AA + R ++W+ ++A V+ G
Sbjct: 192 HAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLG 251
Query: 200 RIEEACMLFESKA----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWN 251
+++A L A + +WN+++ G + R +A + RM + D + +
Sbjct: 252 LVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVS 311
Query: 252 TMITGYAQNNYLAEAQRL----FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+++ A + + V D +T TA+V Y + G++D AR +FD + +
Sbjct: 312 SLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDTLEHR 371
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLF 363
N +WN+++AG+ + + A EL E M NV +WN +ITGY+ +G + A L
Sbjct: 372 NLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQAMLLL 431
Query: 364 DRMP----QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
++ + +SW ++I+G +G EDS F EM++ G + + +L CA L
Sbjct: 432 RQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGL 491
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A L+ GK+LH ++ ++ VG AL+ MY K GS+ A F I +K+++ N M+
Sbjct: 492 ALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAML 551
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
G A HG +A+ LF + G+KPD IT +L+AC GL+ +G EYF +M YGV
Sbjct: 552 TGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGV 611
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P +++Y CMVDLL R+G LDEA L++ P +P A+ WGALL C ++G +LAE AA
Sbjct: 612 VPTAENYACMVDLLARSGYLDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLAEVAAR 671
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+F +EP N+ Y+++ +LY + + ++ M+ RGV G+SW++++ +H F
Sbjct: 672 NLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQGIHVFE 731
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
V + HPE I L L ++K G+V T V+++V EEEKE +L H+EKLA+ YG
Sbjct: 732 VDGSPHPETAEICEELMSLVRQIKMTGYVPDTSCVVYNVPEEEKEKLLLCHTEKLAITYG 791
Query: 720 ILSIPAGR-PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++ A R P+RV+KN R+C DCH KHIS + GR IILRD RFHHF G+CSC DYW
Sbjct: 792 LIHSDASRMPVRVIKNTRMCSDCHEVAKHISALCGRQIILRDAVRFHHFVDGNCSCNDYW 851
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 33/365 (9%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL---- 123
+ + + G D A VF+++ R+ ++N++++G+ GQ + A ++ ++M + L
Sbjct: 349 VDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNV 408
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDR 179
+WN +I+GY N S A L + +VVSW +++SG NG + + F
Sbjct: 409 TTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKE 468
Query: 180 M----LEKNEISWNGLL-----AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
M ++ + ++ LL A ++ G+ E C + ++V +L+ + K
Sbjct: 469 MQKDGVQPSLVTMLVLLRACAGLALLKKGK-ELHCFALRRAYDCDMVVGTALIDMYSKAG 527
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVS 286
L AK IF R+ ++ V N M+TG A + EA LF + D T+TA+++
Sbjct: 528 SLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLT 587
Query: 287 GYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
G + E FD M K V ++ M+ ++ +D A L E A
Sbjct: 588 ACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAMALIERSPVDPGA 647
Query: 342 S-WNTMITGYAQSGEI----THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
S W ++TG + G + ARNLF R+ ++ ++ I++ Y +++ L
Sbjct: 648 SLWGALLTGCSIHGNLDLAEVAARNLF-RLEPYNSANYLMIMSLYEHEQMYDEADSLKYA 706
Query: 397 MKRYG 401
MK G
Sbjct: 707 MKARG 711
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 324/537 (60%), Gaps = 9/537 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMP 305
+ +++ Y + Y +AQRLF+E P KD+ +W +++SG G + RM ++
Sbjct: 101 DRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 160
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARN 361
+ N V+ ++++ +D + L + ++ N++I Y + G + A
Sbjct: 161 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 220
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+ MP +SW +++ + +GY+E + LF MKR G +++ ++L C +
Sbjct: 221 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 280
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+ +H + + GF A + ALL +Y K G + + FEEI D+D I+W M+AG
Sbjct: 281 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAG 340
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA H G++A+ LF+ M G++ D +T +LSACSH+GLVE+G +YF M+ Y V P
Sbjct: 341 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 400
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
HY+CMVDLLGR+GRL++A L+K+MP EP + WGALLGACR+YG EL ++ AE +
Sbjct: 401 RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 460
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
++P + Y++LSN+Y+A+G W D SKVR M++R + + G S++E NK+H F VG
Sbjct: 461 LSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVG 520
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D LHP D I+ LEEL K+++ G T+ VLHD+ EE K M+ HSEKLA+A+G+L
Sbjct: 521 DQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLL 580
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+G P+ + KNLR+C DCH+ K S + R II+RD+ RFHHF+ G CSC DYW
Sbjct: 581 VTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 183/415 (44%), Gaps = 77/415 (18%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-----LEK 183
++S Y + A+ LF+ MP +D+VSWN+++SG + GY A F RM +
Sbjct: 103 LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 162
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
NE++ +++A G ++E SL G VK G AK +
Sbjct: 163 NEVTLLSVVSACADMGALDEG---------------KSLHGVVVKLGMSGKAKVV----- 202
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
N++I Y + +L A +LFEE PV+ + +W +MV + NG ++ +F+
Sbjct: 203 -------NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNL 255
Query: 304 M------PEKNTVSWNAMIAGYVQTKRMDMARELFEAM-TC---KNVASWNTMITGYAQS 353
M P++ T+ A++ T A + + C ++ ++ YA+
Sbjct: 256 MKRAGINPDQATMV--ALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 313
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G + + ++F+ + D I+W A++AGYA ++++LF M + G ++ FT +L
Sbjct: 314 GRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLL 373
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S C++ +E GK+ FE + E Y V+ +
Sbjct: 374 SACSHSGLVEEGKKY--------FEI-----------------MSEVYR-----VEPRLD 403
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++ M+ R G +DA +E +K++ ++P +L AC G VE G E
Sbjct: 404 HYSCMVDLLGRSGRLEDA---YELIKSMPMEPSSGVWGALLGACRVYGNVELGKE 455
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 190/445 (42%), Gaps = 73/445 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-----QRD 122
++ + + G + A +F+ MP + VS+N+++SG G L F +M Q +
Sbjct: 104 VSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPN 163
Query: 123 LVSW-----------------------------------NVMISGYVRNKSLSAARNLFE 147
V+ N +I+ Y + L AA LFE
Sbjct: 164 EVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFE 223
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEE 203
MP R +VSWN+M+ + NGYA+ +F+ M + ++ + LL A G +
Sbjct: 224 EMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQ 283
Query: 204 A----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
A + N +++ +L+ + K RL ++ IF+ + RD ++W M+ GYA
Sbjct: 284 AESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAV 343
Query: 260 NNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---- 311
+ EA +LF+ E D T+T ++S +G V+E + F+ M E V
Sbjct: 344 HACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLD 403
Query: 312 -WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDR---M 366
++ M+ ++ R++ A EL ++M + + W ++ G + + + ++ +
Sbjct: 404 HYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSL 463
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D ++ + Y+ +G D+ ++ MK RL R+P S + + +G
Sbjct: 464 DPSDHRNYIMLSNIYSAAGLWRDASKVRALMKE--RRLTRNPGCSFIEHGNKIHRFVVGD 521
Query: 427 QLHG----------QLVKVGFEAGC 441
QLH +L++ EAGC
Sbjct: 522 QLHPRSDEIHTKLEELIRKIREAGC 546
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 39/269 (14%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S S++ ++ S+ +H +++K + F+G+ L+ MY K G E+A F+E
Sbjct: 63 SIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDE 122
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGLVEK 525
+ +KD++SWN++++G + G+ L F M+T G +P+++T++ ++SAC+ G +++
Sbjct: 123 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 182
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP--------------- 570
G + + G+ +K ++++ G+ G LD A L + MP
Sbjct: 183 GKS-LHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 241
Query: 571 -------------------FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
PD AT ALL AC G AE I NA +
Sbjct: 242 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC-GFNADI 300
Query: 612 YV--LLSNLYAASGRWGDVSKVRLKMRDR 638
+ L NLYA GR + +++DR
Sbjct: 301 IIATALLNLYAKLGRLNASEDIFEEIKDR 329
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/596 (35%), Positives = 347/596 (58%), Gaps = 8/596 (1%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
S ++ N ++ Y G + A ++FD+ P+ + W +I G+ N A F M
Sbjct: 35 SDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMH 94
Query: 151 KRDVVSWN----TMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIE 202
+ ++V N ++L ++ G ++ + E + + N ++ +++ G +
Sbjct: 95 RENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMG 154
Query: 203 EACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY 262
A +F+ + VSWNS++ G+ R+ A+ +FDRM R+ +SW +MI GY +
Sbjct: 155 SARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGD 214
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
L EA+ LFE P KD+ +W MVS Y+ G + AR +F+ MP + +WN MI+G +
Sbjct: 215 LLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKA 274
Query: 323 KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYA 382
MD A+E F+ M +NVASW +I GY + G++ AR++FD+MP+ + ++W+ +I GYA
Sbjct: 275 GEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYA 334
Query: 383 QSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
++G+ SL+L+ K G + + + ++S C+ L + + + V
Sbjct: 335 KTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQ 394
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG 502
V +L+ MY KCG++E A FE + KD+ ++T+I +A HG +DA+ LF M+
Sbjct: 395 VVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKAN 454
Query: 503 IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
IKPD + +G+L+AC+H GLV +G F M +YG+ P+ KHY CMVD+LGRAG L+EA
Sbjct: 455 IKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEA 514
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAAS 622
+L+ +MP P+A WGALL ACR++ +LAE AA +F++EP N+G YVLL N+YA +
Sbjct: 515 HSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADA 574
Query: 623 GRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
G+W D SKVR +R+ V+K G SW+E+ + +H F +GD H + +RI+ LE L
Sbjct: 575 GQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLELL 630
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 201/380 (52%), Gaps = 31/380 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
++D+ NV I MR G SA +F+ M R +VS+N+MI+GY NG++D AR++FD+
Sbjct: 134 EFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDR 193
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M +R+++SW MI GYV+ L AR LFE MP++D+ SW M+S Y G AAR +F
Sbjct: 194 MEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLF 253
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+ M + +WN +++ + G ++ A F+ V SW ++ G++K + A+
Sbjct: 254 ELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARS 313
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL---FEEAPVKDVFTWT-AMVSGYVQNGK 293
+FD+MP ++ V+W+TMI GYA+ + + +L F+E +K T+ ++S Q G
Sbjct: 314 VFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGV 373
Query: 294 VDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQS 353
D A ++I +V LF N+ ++I YA+
Sbjct: 374 PDTAE---------------SVICDFV-------GPSLF-----PNLQVVTSLIDMYAKC 406
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G I A +F+ + Q D ++ +I +A G SED++ LF EM++ + + F VL
Sbjct: 407 GNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVL 466
Query: 414 STCANLASLELGKQLHGQLV 433
+ C + + G++L Q++
Sbjct: 467 TACNHGGLVGEGRRLFRQMI 486
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/545 (40%), Positives = 329/545 (60%), Gaps = 17/545 (3%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----E 306
N ++ YA+ + +++ LFE +D+ +W M+S + Q+ + EA F M E
Sbjct: 152 NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 211
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG-----YAQSGEITHARN 361
+ V+ +++ +R+D+ +E+ + N N+ + Y ++ R
Sbjct: 212 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 271
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCA-NL 419
+FD + W A+I+GYA++G E +L LFIEM K G N + SV+ C +L
Sbjct: 272 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSL 331
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A++ GK++H ++ + VG+AL+ MY KCG + + F E+ +K+VI+WN +I
Sbjct: 332 AAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLI 391
Query: 480 AGYARHGFGKDALMLFESMKTVG-----IKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
HG G++AL LF++M KP+++T + + +ACSH+GL+ +G FY M
Sbjct: 392 MACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMK 451
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD-AATWGALLGACRLYGKTEL 593
D+GV P S HY C+VDLLGRAG+L+EA L+ MP E D W +LLGACR++ EL
Sbjct: 452 HDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVEL 511
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
E AA+ + +EP A YVLLSN+Y+++G W +VR MR GVKK G SW+E ++
Sbjct: 512 GEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRD 571
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+VH F GD HP+ ++++ +LE L K++++G+V T VLH+V E+EKE++L HSEK
Sbjct: 572 EVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEK 631
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+A+GIL+ P G IRV KNLRVC DCH A K ISKI+ R II+RD RFHHF G+CS
Sbjct: 632 LAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCS 691
Query: 774 CGDYW 778
CGDYW
Sbjct: 692 CGDYW 696
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 159/322 (49%), Gaps = 53/322 (16%)
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
T + NA++A Y + R+D ++ LFE+ +++ SWNTMI+ ++QS DR
Sbjct: 148 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQS----------DR--- 194
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+SE +L F M G L+ SVL C++L L++GK++
Sbjct: 195 -----------------FSE-ALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEI 236
Query: 429 HGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
H +++ FVG+AL+ MYC C VE F+ I+ + + WN MI+GYAR+G
Sbjct: 237 HAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGL 296
Query: 488 GKDALMLF-ESMKTVGIKPDDITMVGILSACSHT-GLVEKGTEYFYSMNRDYGVIPNSKH 545
+ AL+LF E +K G+ P+ TM ++ AC H+ + KG E R+ + +
Sbjct: 297 DEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM-LASDITV 355
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ +VD+ + G L+ ++ + MP + TW L+ AC ++GK E+A E
Sbjct: 356 GSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGK---GEEALE------ 405
Query: 606 PENAGMYVLLSNLYAASGRWGD 627
L N+ A +GR G+
Sbjct: 406 --------LFKNMVAEAGRGGE 419
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 25/259 (9%)
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
P SW + +S +++ +IEM G R + F +VL + L L+ G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 427 QLHGQLVKVGFEAG---------------------CFVGNALLVMYCKCGSVEEAYHAFE 465
Q+H VK G+ + F NAL+ MY K G V+++ FE
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
VD+D++SWNTMI+ +++ +AL F M G++ D +T+ +L ACSH ++
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E + R+ +I NS + +VD+ +++ + + ++ W A++
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHI-LGRRIELWNAMISG- 290
Query: 586 RLYGKTELAEKAAEVIFEM 604
Y + L EKA + EM
Sbjct: 291 --YARNGLDEKALILFIEM 307
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 160/377 (42%), Gaps = 61/377 (16%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
NA+++ Y G++D ++ +F+ RD+VSWN MIS + ++ S A F +M +
Sbjct: 152 NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 211
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACM 206
D V+ ++L + D + I +L N++ N + + Y ++E
Sbjct: 212 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 271
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM------------- 253
+F+ + WN+++ G+ + A +F M + NT
Sbjct: 272 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSL 331
Query: 254 --------ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
I YA N LA D+ +A+V Y + G ++ +R +F+ MP
Sbjct: 332 AAIAKGKEIHAYAIRNMLA-----------SDITVGSALVDMYAKCGCLNLSRRVFNEMP 380
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK---------NVASWNTMITGYAQSGEI 356
KN ++WN +I + + A ELF+ M + N ++ T+ + SG I
Sbjct: 381 NKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 440
Query: 357 THARNLFDRM-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
+ NLF RM P D +A ++ ++G E++ L M +++ +
Sbjct: 441 SEGLNLFYRMKHDHGVEPTSD--HYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG--AW 496
Query: 410 TSVLSTCANLASLELGK 426
+S+L C ++ELG+
Sbjct: 497 SSLLGACRIHQNVELGE 513
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 151/356 (42%), Gaps = 60/356 (16%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF--------- 239
N L+A Y + GR++++ LFES + ++VSWN+++ F + R +A F
Sbjct: 152 NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 211
Query: 240 ----------------DRMPVRDEVS---------------WNTMITGYAQNNYLAEAQR 268
+R+ V E+ + ++ Y + +R
Sbjct: 212 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 271
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE-----KNTVSWNAMIAGYVQT- 322
+F+ + + W AM+SGY +NG ++A ++F M + NT + +++ V +
Sbjct: 272 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSL 331
Query: 323 ----KRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
K ++ M ++ + ++ YA+ G + +R +F+ MP + I+W +I
Sbjct: 332 AAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLI 391
Query: 379 AGYAQSGYSEDSLRLF----IEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
G E++L LF E R GE + N F +V + C++ + G L ++
Sbjct: 392 MACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMK 451
Query: 434 -KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI---VDKDVISWNTMIAGYARH 485
G E ++ + + G +EEAY + DK V +W++++ H
Sbjct: 452 HDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDK-VGAWSSLLGACRIH 506
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/524 (42%), Positives = 308/524 (58%), Gaps = 21/524 (4%)
Query: 274 PVKDVFTWTAMVSGYVQ-----NGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQT 322
P + F W ++ +VQ G IF M P+ +T + ++ +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPF--LLQSFASP 77
Query: 323 KRMDMARELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ + R + + +A ++I+ Y+ SG + ARNLF MP+ + ISW+ +I
Sbjct: 78 SLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMI 137
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGE---RLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
GY + G +++L LF EM+ G R N + VL+ C L +LE GK H + K
Sbjct: 138 NGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKC 197
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALML 494
G +G AL+ MY KCGSVE+A F + +KDV++W+ MI+G A HG ++ + L
Sbjct: 198 GMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGL 257
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
F M G++P+ +T + + AC H GLV +G +Y M DY +IP +HY CMVDL G
Sbjct: 258 FSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYG 317
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAGR+ EA N++K+MP EPD WGALL R++G E E A + + E+EP N+G YVL
Sbjct: 318 RAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVL 377
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
LSN+YA GRW DV VR M G+KKV G S +EV +H F VGD HPE +I+
Sbjct: 378 LSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMM 437
Query: 675 LEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKN 734
LEE+ +LK +G+V +TK VL D+ EE KE L HSEKLA+AYG L G PIR++KN
Sbjct: 438 LEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKN 497
Query: 735 LRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
LR+C DCH AIK ISK+ R II+RD NRFHHF+ G CSC DYW
Sbjct: 498 LRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 63/316 (19%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++IS Y +G +D AR +F MP+R+++SW+ MI+GYVR A LF M
Sbjct: 103 TSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREM------ 156
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESK 211
ML G D + NE + +G+LAA + G +E + +
Sbjct: 157 ---QML------GVND---------VRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCG 198
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM-PVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+VV +L+ + K + A W+F + P +D ++W+ MI+G A + E LF
Sbjct: 199 MPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLF 258
Query: 271 EEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+ + V T+ A+ V G V E + M E ++
Sbjct: 259 SKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSI---------------- 302
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSG 385
+ + M+ Y ++G I A N+ MP + D + W A+++G G
Sbjct: 303 ----------IPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG 352
Query: 386 ---YSEDSLRLFIEMK 398
E +L+ IE++
Sbjct: 353 DIETCELALKKLIELE 368
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 133/313 (42%), Gaps = 34/313 (10%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I+ + +G D A ++F MP R+ +S++ MI+GY+ GQ A +F +M + L +
Sbjct: 106 ISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREM--QMLGVND 163
Query: 128 VMISGYVRNKSLSAARNLFEM--------------MPKRDVVSWNTMLSGYAQNGYADAA 173
V + + + L+A L + MP DVV ++ YA+ G + A
Sbjct: 164 VRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV-DVVLGTALIDMYAKCGSVEKA 222
Query: 174 RRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV---------VSWNSLM 223
+F + K+ ++W+ +++ +G EE LF N V V +
Sbjct: 223 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVH 282
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWT 282
GG V + + + D + + M+ Y + + EA + + P++ DV W
Sbjct: 283 GGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWG 342
Query: 283 AMVSGYVQNGKVDEARMIFDAMPE-KNTVSWNAMIAGYVQTKR-----MDMARELFEAMT 336
A++SG +G ++ + + E + T S ++ V KR + R+L E M
Sbjct: 343 ALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMG 402
Query: 337 CKNVASWNTMITG 349
K V + + G
Sbjct: 403 IKKVPGCSLIEVG 415
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/550 (39%), Positives = 336/550 (61%), Gaps = 30/550 (5%)
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDE 296
MP RD ++W +++T Q N + +F D F ++A+V G +D
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 60
Query: 297 ARMI----FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
R + + + V ++++ Y + ++ A+ +F+++ KN SW M++GYA+
Sbjct: 61 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 120
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER---LNRSPF 409
SG A LF +P + SW A+I+G+ QSG ++ +F EM+R ER L+
Sbjct: 121 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRR--ERVDILDPLVL 178
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+S++ CANLA+ G+Q+HG NAL+ MY KC V A F +
Sbjct: 179 SSIVGACANLAASIAGRQVHG--------------NALIDMYAKCSDVIAAKDIFSRMRH 224
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+DV+SW ++I G A+HG + AL L++ M + G+KP+++T VG++ ACSH G VEKG E
Sbjct: 225 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 284
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F SM +DYG+ P+ +HYTC++DLLGR+G LDEA+NL+ MPF PD TW ALL AC+ G
Sbjct: 285 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 344
Query: 590 KTELAEKAAE-VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
+ ++ + A+ ++ + ++ Y+LLSN+YA++ WG VS+ R K+ + V+K G+S
Sbjct: 345 RGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSS 404
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK-QDGFVYSTKLVLHDVGEEEKEHML 707
+EV+ + F G+T HP K+ I+ L++LE +++ ++G+V T +LHD+ E+EKE +L
Sbjct: 405 VEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLL 464
Query: 708 RYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHF 767
+HSE+ AVAYG+L G PIR++KNLRVC DCH +KHIS+I R II+RD R+HHF
Sbjct: 465 FWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHF 524
Query: 768 SGGSCSCGDY 777
GG CSC D+
Sbjct: 525 KGGKCSCNDF 534
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 172/353 (48%), Gaps = 18/353 (5%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAA-----RRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
MP RD ++W ++L+ Q + L ++ ++ L+ A G I+
Sbjct: 1 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 60
Query: 204 A----CMLFESK-ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
C S+ AN EVV +SL+ + K L AK +FD + V++ +SW M++GYA
Sbjct: 61 GRQVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYA 119
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
++ EA LF PVK++++WTA++SG+VQ+GK EA +F M + + ++
Sbjct: 120 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 179
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ ++A A N +I YA+ ++ A+++F RM D +SW ++I
Sbjct: 180 SIVGACANLA-----ASIAGRQVHGNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLI 234
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGF 437
G AQ G +E +L L+ +M +G + N F ++ C+++ +E G++L + K G
Sbjct: 235 VGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGI 294
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGK 489
LL + + G ++EA + + D +W +++ R G G+
Sbjct: 295 RPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQ 347
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 42/335 (12%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N+ H R C H S V ++++ Y G L+ A+ VFD + ++ +
Sbjct: 54 NLGSIDHGRQVHC----HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTI 109
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
SW M+SGY ++ A LF ++P +++ SW ++SG+ Q+G A +F M +
Sbjct: 110 SWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 169
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
+ L+ + I AC + V N+L+ + K + AK IF RM
Sbjct: 170 VDILDPLVLS-----SIVGACANLAASIAGRQVHGNALIDMYAKCSDVIAAKDIFSRMRH 224
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
RD VSW ++I G AQ+ +A L+++ MVS V+
Sbjct: 225 RDVVSWTSLIVGMAQHGQAEKALALYDD-----------MVSHGVK-------------- 259
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHA 359
N V++ +I ++ RELF++MT ++ + ++ +SG + A
Sbjct: 260 --PNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 317
Query: 360 RNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRL 393
NL MP D +WAA+++ + G + +R+
Sbjct: 318 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 352
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W ++ + ++G + AL +F +P ++ S+ A+ISG++ +G+ A VF +M + +
Sbjct: 111 WTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 170
Query: 124 --------------------------VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
V N +I Y + + AA+++F M RDVVSW
Sbjct: 171 DILDPLVLSSIVGACANLAASIAGRQVHGNALIDMYAKCSDVIAAKDIFSRMRHRDVVSW 230
Query: 158 NTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
+++ G AQ+G A+ A ++D M ++ NE+++ GL+ A G +E+ LF+S
Sbjct: 231 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK 290
Query: 214 -----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNY----L 263
+ + L+ + L +A+ + MP DE +W +++ + +
Sbjct: 291 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 350
Query: 264 AEAQRLFEEAPVKDVFTWTAMVSGYVQN---GKVDEAR 298
A L +KD T+ + + Y GKV EAR
Sbjct: 351 RIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 388
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/531 (40%), Positives = 315/531 (59%), Gaps = 39/531 (7%)
Query: 287 GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR----MDMAREL---------FE 333
G +++ + R +FD M E++ VSWN +I G + KR + M RE+ F
Sbjct: 113 GGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFT 172
Query: 334 AMTC--------------------------KNVASWNTMITGYAQSGEITHARNLFDRMP 367
T +V +++I YA ++ ++ +FD
Sbjct: 173 LSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFS 232
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
D + W +++AGYAQ+G E++L +F M + G R F+S++ NL+ L LGKQ
Sbjct: 233 DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQ 292
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
LH L++ F F+ ++L+ MYCKCG+V+ A F I D++SW MI GYA HG
Sbjct: 293 LHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGP 352
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYT 547
+A +LFE M+ +KP+ IT + +L+ACSH GLV+ G +YF SM+ YG +P+ +H
Sbjct: 353 TTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCA 412
Query: 548 CMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+ D LGRAG LDEA N + M +P ++ W LL ACR++ T LAE+ A+ IFE+EP+
Sbjct: 413 ALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPK 472
Query: 608 NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE 667
+ G +V+LSN+Y+ASGRW + +++R MR +G+KK SW+EV+NK+H F D HP
Sbjct: 473 SMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPW 532
Query: 668 KDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGR 727
DRI L ++ + G+V + + VL D+ EE+K +L HSEKLA+ +GI+S P G
Sbjct: 533 YDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGT 592
Query: 728 PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IRVMKNLRVC DCH A K ISKIV R I++RD NRFH F G+CSCGD+W
Sbjct: 593 TIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 143/325 (44%), Gaps = 62/325 (19%)
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK----SLSAARNLFE--MMPKRDV 154
G L + + R+VFD+M +RD VSWN +I G +K +LS R ++ MP D
Sbjct: 113 GGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMP--DT 170
Query: 155 VSWNTMLSGYAQ----------NGYA-------------------------DAARRIFDR 179
+ +T+L +A+ +GYA D + ++FD
Sbjct: 171 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGF--VKQKRLG 233
+ + + WN +LA Y QNG +EEA +F V V+++SL+ F + RLG
Sbjct: 231 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Query: 234 D---AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
A I R +S +++I Y + + A+R+F D+ +WTAM+ GY
Sbjct: 291 KQLHAYLIRARFNDNIFIS-SSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYAL 349
Query: 291 NGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVA 341
+G EA ++F+ M + N +++ A++ +D + F +M+ ++
Sbjct: 350 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLE 409
Query: 342 SWNTMITGYAQSGEITHARNLFDRM 366
+ ++G++ A N M
Sbjct: 410 HCAALADTLGRAGDLDEAYNFISEM 434
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 35/286 (12%)
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP--FTSVLSTCANLASLELGKQLHG 430
SWA I A G ++ LF++M+ + P + L +CA L L LH
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 431 QLVKVGFEAGCFVGNALLVMYCKC---------------GSVEEAYH-----AFEEIVDK 470
++ G A F NALL + K G +E A + F+E++++
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT--- 527
D +SWNT+I G A H ++AL + M G PD T+ +L + +++G
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
Y D V S ++D+ ++D + + + + DA W ++L
Sbjct: 194 GYAIKNGFDNDVFVGSS----LIDMYANCTQMDYSMKVFDSFS-DCDAVLWNSMLAG--- 245
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
Y + E+A + M AG+ + + +G++S +RL
Sbjct: 246 YAQNGSVEEALGIFRRM--LQAGVRPVPVTFSSLIPAFGNLSLLRL 289
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 30/283 (10%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQ 113
D D WN + + +NG + AL +F M R V+++++I + L +Q
Sbjct: 233 DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQ 292
Query: 114 VFDQMPQRDLVSWNVMISG-----YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
+ + R + N+ IS Y + ++ AR +F + D+VSW M+ GYA +G
Sbjct: 293 LHAYL-IRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHG 351
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANW-----EVVSW 219
A +F+RM ++ N I++ +L A G ++ F S +N +
Sbjct: 352 PTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHC 411
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMITG--YAQNNYLAE--AQRLFEEAP 274
+L + L +A M ++ S W+T++ +N LAE A+++FE P
Sbjct: 412 AALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEP 471
Query: 275 VKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMPEKNTVSW 312
K + + + + Y +G+ +EA M M ++ SW
Sbjct: 472 -KSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSW 513
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 127/293 (43%), Gaps = 23/293 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
+++I Y Q+D + +VFD D V WN M++GY +N S+ A +F M + V
Sbjct: 209 SSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVR 268
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML 207
V++++++ + +++ ++ N + L+ Y + G ++ A +
Sbjct: 269 PVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRV 328
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMITGYAQNNYL 263
F + ++VSW +++ G+ +A +F+RM + + +++ ++T + +
Sbjct: 329 FNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLV 388
Query: 264 AEAQRLFEEAP-----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIA 317
+ F V + A+ + G +DEA M K T S W+ ++
Sbjct: 389 DNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLR 448
Query: 318 GYVQTKRM----DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
K ++A+++FE + K++ S + Y+ SG A L M
Sbjct: 449 ACRVHKNTVLAEEVAKKIFE-LEPKSMGSHVILSNMYSASGRWNEAAQLRKSM 500
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/634 (36%), Positives = 367/634 (57%), Gaps = 48/634 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V N MIS Y+ G L AR +FD+MP+R+ VSW+ +ISG ++ + + FE P +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGR--IEEACM 206
+VVSW +SG+ +NG A ++F R+LE N++++ ++ A + G + + +
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 207 LFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
KA +E + NSL+ ++ + A+ +FDRM RD VSW ++ Y + L
Sbjct: 208 GLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLR 267
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE------------------ 306
EA+R+F+E P ++ +W+AM++ Y Q+G +EA +F M +
Sbjct: 268 EARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALA 327
Query: 307 ---------------------KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
K+ +++I Y + + D R +F+ + KNV WN+
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
M+ GY+ +G + LF+ +P+ + SW IJAGY ++ E L +F + G+ N
Sbjct: 388 MVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+S F+SVL CA++ASL+ G +HG+++K+G + FVG AL MY KCG + + FE
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVE 524
+ +K+ ISW MI G A GF ++L+LFE M +T + P+++ ++ +L ACSH GLV+
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVD 567
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
KG YF SM + YG+ P KHYTC+VDLL R+GRL EA+ ++ +PF+P+A W ALL
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+ Y ++AE+ A+ ++++ N+ YVLLSN+YA++GRW DVS +R MR++G+KK
Sbjct: 628 CKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSG 687
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
G SW+EV+N+VH+F D H + D IY L+ L
Sbjct: 688 GCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLL 721
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 248/510 (48%), Gaps = 88/510 (17%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
LL Y+ + E + + ++V N ++ +V+ L A+ +FD MP R+EVSW
Sbjct: 62 LLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSW 121
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
+ +I+G + + E+ FE P ++V +WTA +SG+V+NG EA +F + E
Sbjct: 122 SALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVR 181
Query: 308 -NTVSW-----------------------------------NAMIAGYVQTKRMDMAREL 331
N V++ N++I ++ +D+AR +
Sbjct: 182 PNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRV 241
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F+ M ++V SW ++ Y ++G++ AR +FD MP+ + ISW+A+IA Y+QSGY+E++L
Sbjct: 242 FDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEAL 301
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+LF +M + G + N S F LS A+L +L G +HG + K+G + F+G++L+ +Y
Sbjct: 302 KLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLY 361
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG-------------------FG---- 488
CKCG ++ F+ I++K+V+ WN+M+ GY+ +G +G
Sbjct: 362 CKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJA 421
Query: 489 --------KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
+ L +F ++ G P+ T +L AC+ ++KG MN +I
Sbjct: 422 GYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKG------MNVHGKII 475
Query: 541 PNSKHY-----TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
Y T + D+ + G + ++ + + MP E + +W ++ ++ A
Sbjct: 476 KLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP-EKNEISWTVMIQG---LAESGFAV 531
Query: 596 KAAEVIFEMEPEN---AGMYVLLSNLYAAS 622
++ + EME + +LLS L+A S
Sbjct: 532 ESLILFEEMERTSEVAPNELMLLSVLFACS 561
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 207/460 (45%), Gaps = 89/460 (19%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD- 122
W+ I+ M+ G + ++ F P ++ VS+ A ISG++ NG A ++F ++ +
Sbjct: 121 WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGV 180
Query: 123 --------------------------------------LVSWNVMISGYVRNKSLSAARN 144
L N +I+ +R + AR
Sbjct: 181 RPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARR 240
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+F+ M KRDVVSW +L Y + G ARRIFD M E+NEISW+ ++A Y Q+G EEA
Sbjct: 241 VFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEA 300
Query: 205 CMLFESKANWE-----VVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMIT 255
LF SK E + + + + L I + +D +++I
Sbjct: 301 LKLF-SKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLID 359
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
Y + + + +F+ K+V W +MV GY NG+++E +F+ +PEKN SW +
Sbjct: 360 LYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTI 419
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCKNVASWN-------------- 344
JAGY++ ++ + E+F + C ++AS +
Sbjct: 420 JAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGI 479
Query: 345 -------TMITG-YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
T +T YA+ G+I ++ +F+RMP+ + ISW +I G A+SG++ +SL LF E
Sbjct: 480 QYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEE 539
Query: 397 MKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
M+R E N SVL C++ ++ G + KV
Sbjct: 540 MERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKV 579
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 168/393 (42%), Gaps = 117/393 (29%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVF----NSMPRRSSVSY-------------------- 95
++ W AI+ +RNG AL +F S R + V++
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 96 ---------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
N++I+ L G++D AR+VFD+M +RD+VSW ++ YV L
Sbjct: 208 GLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLR 267
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-------------------- 180
AR +F+ MP+R+ +SW+ M++ Y+Q+GYA+ A ++F +M
Sbjct: 268 EARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALA 327
Query: 181 -------------------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
++K+ + L+ Y + G+ ++ ++F+ VV WNS
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE------EAPV 275
++GG+ RL + + +F+ +P +++ SW T+J GY +N + +F + P
Sbjct: 388 MVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 276 K---------------------------------DVFTWTAMVSGYVQNGKVDEARMIFD 302
K D+F TA+ Y + G + ++ +F+
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
MPEKN +SW MI G ++ + LFE M
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEM 540
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 117/305 (38%), Gaps = 89/305 (29%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC--------------- 454
S+L +N + G LH L+K GF + ++ LL++Y C
Sbjct: 25 VSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDG 84
Query: 455 ----------------GSVEEAYHAFEEIVDK---------------------------- 470
G++ +A F+E+ ++
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERN 144
Query: 471 ---DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG------ 521
+V+SW I+G+ R+G +AL LF + G++P+D+T ++ AC G
Sbjct: 145 PFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGM 204
Query: 522 -----LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+V+ G E++ S + NS ++ L R G +D A+ + M + D
Sbjct: 205 SILGLVVKAGFEHYLS-------VSNS-----LITLSLRMGEIDLARRVFDRME-KRDVV 251
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+W A+L A Y +T +A + EM N + + Y+ SG + K+ KM
Sbjct: 252 SWTAILDA---YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 637 DRGVK 641
G K
Sbjct: 309 QEGFK 313
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 119/285 (41%), Gaps = 60/285 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + I + + G D VF+ + ++ V +N+M+ GY +NG+L+ ++F+
Sbjct: 348 DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFEL 407
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKR------------------- 152
+P+++ SW +J+GY+ N+ +F + P +
Sbjct: 408 IPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKG 467
Query: 153 --------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
D+ + YA+ G +++++F+RM EKNEISW ++ ++
Sbjct: 468 MNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAES 527
Query: 199 GRIEEACMLFESKANWEVVSWNSLM----------GGFVKQKRLGDAKWIFDRMPVRDEV 248
G E+ +LFE V+ N LM G V + W F+ M +
Sbjct: 528 GFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK-----GLWYFNSMEKVYGI 582
Query: 249 S-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSG 287
+ ++ +++ L EA+ P + + W A++SG
Sbjct: 583 KPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/634 (36%), Positives = 368/634 (58%), Gaps = 48/634 (7%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V N MIS Y+ G L AR +FD+MP+R+ VSW+ +ISG ++ + + FE P +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGR--IEEACM 206
+VVSW +SG+ +NG A ++F R+LE N++++ ++ A + G + + +
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 207 LFESKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
KA +E + NSL+ ++ + A+ +FDRM RD VSW ++ Y + L
Sbjct: 208 GLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLR 267
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE------------------ 306
EA+R+F+E P ++ +W+AM++ Y Q+G +EA +F M +
Sbjct: 268 EARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALA 327
Query: 307 ---------------------KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
K+ +++I Y + + D R +F+ + KNV WN+
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
M+ GY+ +G + LF+ +P+ + +SW IIAGY ++ E L +F + G+ N
Sbjct: 388 MVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
+S F+SVL CA++ASL+ G +HG+++K+G + FVG AL MY KCG + + FE
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVE 524
+ +K+ ISW MI G A GF ++L+LFE M +T + P+++ ++ +L ACSH GLV+
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVD 567
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
KG YF SM + YG+ P KHYTC+VDLL R+GRL EA+ ++ +PF+P+A W ALL
Sbjct: 568 KGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C+ Y ++AE+ A+ ++++ N+ YVLLSN+YA++GRW DVS +R MR++G+KK
Sbjct: 628 CKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSG 687
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
G SW+EV+N+VH+F D H + + IY L+ L
Sbjct: 688 GCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLL 721
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 248/510 (48%), Gaps = 88/510 (17%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
LL Y+ + E + + ++V N ++ +V+ L A+ +FD MP R+EVSW
Sbjct: 62 LLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSW 121
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
+ +I+G + + E+ FE P ++V +WTA +SG+V+NG EA +F + E
Sbjct: 122 SALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVR 181
Query: 308 -NTVSW-----------------------------------NAMIAGYVQTKRMDMAREL 331
N V++ N++I ++ +D+AR +
Sbjct: 182 PNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRV 241
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F+ M ++V SW ++ Y ++G++ AR +FD MP+ + ISW+A+IA Y+QSGY+E++L
Sbjct: 242 FDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEAL 301
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+LF +M + G + N S F LS A+L +L G +HG + K+G + F+G++L+ +Y
Sbjct: 302 KLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLY 361
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG-------------------FG---- 488
CKCG ++ F+ I++K+V+ WN+M+ GY+ +G +G
Sbjct: 362 CKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIA 421
Query: 489 --------KDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
+ L +F ++ G P+ T +L AC+ ++KG MN +I
Sbjct: 422 GYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKG------MNVHGKII 475
Query: 541 PNSKHY-----TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
Y T + D+ + G + ++ + + MP E + +W ++ ++ A
Sbjct: 476 KLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP-EKNEISWTVMIQG---LAESGFAV 531
Query: 596 KAAEVIFEMEPEN---AGMYVLLSNLYAAS 622
++ + EME + +LLS L+A S
Sbjct: 532 ESLILFEEMERTSEVAPNELMLLSVLFACS 561
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 208/460 (45%), Gaps = 89/460 (19%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD- 122
W+ I+ M+ G + ++ F P ++ VS+ A ISG++ NG A ++F ++ +
Sbjct: 121 WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGV 180
Query: 123 --------------------------------------LVSWNVMISGYVRNKSLSAARN 144
L N +I+ +R + AR
Sbjct: 181 RPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARR 240
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+F+ M KRDVVSW +L Y + G ARRIFD M E+NEISW+ ++A Y Q+G EEA
Sbjct: 241 VFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEA 300
Query: 205 CMLFESKANWE-----VVSWNSLMGGFVKQKRLGDAKWIFDRMPV----RDEVSWNTMIT 255
LF SK E + + + + L I + +D +++I
Sbjct: 301 LKLF-SKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLID 359
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
Y + + + +F+ K+V W +MV GY NG+++E +F+ +PEKN VSW +
Sbjct: 360 LYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTI 419
Query: 316 IAGYVQTKRMDMARELFEAM-----------------TCKNVASWN-------------- 344
IAGY++ ++ + E+F + C ++AS +
Sbjct: 420 IAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGI 479
Query: 345 -------TMITG-YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
T +T YA+ G+I ++ +F+RMP+ + ISW +I G A+SG++ +SL LF E
Sbjct: 480 QYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEE 539
Query: 397 MKRYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
M+R E N SVL C++ ++ G + KV
Sbjct: 540 MERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKV 579
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 169/393 (43%), Gaps = 117/393 (29%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVF----NSMPRRSSVSY-------------------- 95
++ W AI+ +RNG AL +F S R + V++
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 96 ---------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
N++I+ L G++D AR+VFD+M +RD+VSW ++ YV L
Sbjct: 208 GLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLR 267
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-------------------- 180
AR +F+ MP+R+ +SW+ M++ Y+Q+GYA+ A ++F +M
Sbjct: 268 EARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALA 327
Query: 181 -------------------LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
++K+ + L+ Y + G+ ++ ++F+ VV WNS
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE------EAPV 275
++GG+ RL + + +F+ +P +++VSW T+I GY +N + +F + P
Sbjct: 388 MVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 276 K---------------------------------DVFTWTAMVSGYVQNGKVDEARMIFD 302
K D+F TA+ Y + G + ++ +F+
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFE 507
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
MPEKN +SW MI G ++ + LFE M
Sbjct: 508 RMPEKNEISWTVMIQGLAESGFAVESLILFEEM 540
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 120/285 (42%), Gaps = 60/285 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ + I + + G D VF+ + ++ V +N+M+ GY +NG+L+ ++F+
Sbjct: 348 DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFEL 407
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM------PKR------------------- 152
+P+++ VSW +I+GY+ N+ +F + P +
Sbjct: 408 IPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKG 467
Query: 153 --------------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
D+ + YA+ G +++++F+RM EKNEISW ++ ++
Sbjct: 468 MNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAES 527
Query: 199 GRIEEACMLFESKANWEVVSWNSLM----------GGFVKQKRLGDAKWIFDRMPVRDEV 248
G E+ +LFE V+ N LM G V + W F+ M +
Sbjct: 528 GFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK-----GLWYFNSMEKVYGI 582
Query: 249 S-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSG 287
+ ++ +++ L EA+ P + + W A++SG
Sbjct: 583 KPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 117/305 (38%), Gaps = 89/305 (29%)
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC--------------- 454
S+L +N + G LH L+K GF + ++ LL++Y C
Sbjct: 25 VSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDG 84
Query: 455 ----------------GSVEEAYHAFEEIVDK---------------------------- 470
G++ +A F+E+ ++
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERN 144
Query: 471 ---DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG------ 521
+V+SW I+G+ R+G +AL LF + G++P+D+T ++ AC G
Sbjct: 145 PFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGM 204
Query: 522 -----LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+V+ G E++ S + NS ++ L R G +D A+ + M + D
Sbjct: 205 SILGLVVKAGFEHYLS-------VSNS-----LITLSLRMGEIDLARRVFDRME-KRDVV 251
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
+W A+L A Y +T +A + EM N + + Y+ SG + K+ KM
Sbjct: 252 SWTAILDA---YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 637 DRGVK 641
G K
Sbjct: 309 QEGFK 313
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/692 (36%), Positives = 377/692 (54%), Gaps = 63/692 (9%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKR---DVVSWNTMLSGYAQNGYADAARRIFDRMLEK 183
N +IS Y + K++ AR +F+ + R D V+WN+++S Y+ + A +F M
Sbjct: 165 NAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVG 224
Query: 184 -----------NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
N + G L + ++ C+ S +V N+L+ + K ++
Sbjct: 225 YGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCV--RSGLVEDVFVGNALVDMYAKCGKM 282
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGY 288
DA +F+RM +D V+WN M+TGY+QN +A LF EE DV TW++++SGY
Sbjct: 283 EDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGY 342
Query: 289 VQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK------ 338
Q G EA +F M N V+ ++++ + +E + K
Sbjct: 343 AQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET-HCYSVKFILKGE 401
Query: 339 ------NVASWNTMITGYAQSGEITHARNLFDRM--PQHDCISWAAIIAGYAQSGYSEDS 390
++A N +I YA+ + AR +FD + D ++W +I GYAQ G + +
Sbjct: 402 HNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHA 461
Query: 391 LRLFIEMKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGF--EAGCFVGNA 446
L+LF EM + + + FT VL CA LA+L+ GKQ+H +++ FV N
Sbjct: 462 LQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANC 521
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY K G V+ A F+ + ++ +SW +++ GY HG +DA +F+ M+ + D
Sbjct: 522 LIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLD 581
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT + +L ACSH+G+ D+GV P +HY CMVDLLGRAGRL EA L+
Sbjct: 582 GITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLI 628
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+MP EP W ALL ACR++ ELAE AA+ + E++ +N G Y LLSN+YA + RW
Sbjct: 629 NDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWK 688
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DV+++ M+ G+KK+ G+SW++ + + TF VGD H + +IY L +L ++K +
Sbjct: 689 DVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKAN- 747
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
LHDV +EEK L HSEKLA+AY IL++P G PIR+ KNLR+C D H+AI
Sbjct: 748 ------FSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAIT 801
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+IS IV IILRD++RFH F GSCSC YW
Sbjct: 802 YISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 144/583 (24%), Positives = 239/583 (40%), Gaps = 114/583 (19%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSM-------PRRSSVSYNAMISGYLLNGQLD 109
G D WN ++ + + A+ +F M P V + GYL G
Sbjct: 191 GICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLC- 249
Query: 110 PARQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
RQV + LV N ++ Y + + A +FE M +DVV+WN M++GY+
Sbjct: 250 -GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYS 308
Query: 166 QNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES----KANWEVV 217
QNG + A +F +M +E + ++W+ +++ Y Q G EA +F + VV
Sbjct: 309 QNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVV 368
Query: 218 SWNSLMGGFV--------KQKRLGDAKWIFD---RMPVRDEVSWNTMITGYAQNNYLAEA 266
+ SL+ K+ K+I D N +I YA+ L A
Sbjct: 369 TLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVA 428
Query: 267 QRLFEEAPVK--DVFTWTAMVSGYVQNGKVDEARMIFDAM--------PEKNTVSWNAM- 315
+ +F+E K DV TWT M+ GY Q+G + A +F M P T+S M
Sbjct: 429 RAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMA 488
Query: 316 ------------IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF 363
I YV + + LF A N +I Y++SG++ A+ +F
Sbjct: 489 CARLAALKFGKQIHAYVLRRSRIDSDVLFVA---------NCLIDMYSKSGDVDTAQVVF 539
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
D M + + +SW +++ GY G SED+ R+F EM++ L+ F VL C++ + ++
Sbjct: 540 DSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSH-SGMD 598
Query: 424 LGKQLHGQLVKVGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
G V G E C V + + G + EA ++ ++ + W +++
Sbjct: 599 FG-------VDPGVEHYACMVD-----LLGRAGRLGEAMRLINDMPIEPTPVVWIALLSA 646
Query: 482 YARHGFGKDALMLFESMKTVGIKPD-------------------DITMVGILSACSHTGL 522
H + L F + K + +K D D+ +G L TG+
Sbjct: 647 CRIH--SNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLM--KRTGI 702
Query: 523 VE----------KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ KG E FY +R + + + K Y + DL+ R
Sbjct: 703 KKIPGWSWVKGRKGMETFYVGDRTH--LQSQKIYETLADLIKR 743
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 186/446 (41%), Gaps = 77/446 (17%)
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV---KDVFTWTA 283
+ Q +L ++I + + + +I Y +N + A L E+ V+ W
Sbjct: 37 LTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQ 96
Query: 284 MVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMD------MAREL 331
++ + + A +F M P+ T + G + + + R
Sbjct: 97 LIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLG 156
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH---DCISWAAIIAGYAQSGYSE 388
FE+ NV N +I+ Y + + HAR +FD + D ++W +I++ Y+
Sbjct: 157 FES----NVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPN 212
Query: 389 DSLRLFIEMKR-YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
++ LF EM YG + ++L C L G+Q+HG V+ G FVGNAL
Sbjct: 213 VAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNAL 272
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTM----------------------------- 478
+ MY KCG +E+A FE + KDV++WN M
Sbjct: 273 VDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDV 332
Query: 479 ------IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFY 531
I+GYA+ GFG +A+ +F M +P+ +T++ +LSAC+ G + G E + Y
Sbjct: 333 VTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCY 392
Query: 532 SM-----------NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM-PFEPDAATWG 579
S+ D VI ++D+ + L+ A+ + + P + D TW
Sbjct: 393 SVKFILKGEHNDDTDDLAVI------NALIDMYAKCKSLEVARAMFDEICPKDRDVVTWT 446
Query: 580 ALLGACRLYGKTELAEKAAEVIFEME 605
++G +G A + +F+++
Sbjct: 447 VMIGGYAQHGDANHALQLFSEMFKID 472
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/790 (33%), Positives = 405/790 (51%), Gaps = 88/790 (11%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLV 124
H + C D S+ VF+SM R VS+ A+IS Y+ G D A+ +F M + DL+
Sbjct: 226 HFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLI 285
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM 180
SW+ ++SG+ RN + A E MP+R V SWN ++SG QNGY + A +F RM
Sbjct: 286 SWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRM 345
Query: 181 L----EKNEISWNGLLAA-----------------------------------YVQNGRI 201
L + N I+ +L A Y + G
Sbjct: 346 LWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSY 405
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGY 257
+ A +F N WN ++ +V + ++ DA + M D +++NT+++G+
Sbjct: 406 DYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGH 465
Query: 258 AQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM--------- 304
A+N +A L E +V ++ ++SG+ Q+G EA +F M
Sbjct: 466 ARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNP 525
Query: 305 ---------PEKNTVSWN----AMIAGYVQTKRMD--MARELFEAMTCKNVASWNTMITG 349
P T++ A + + Q K + R FE N+ + ++
Sbjct: 526 NEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEP----NIFVSSALVDM 581
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA+ ++ A +F R+ + +SW A++AGY + E++L+LF+EM G + + F
Sbjct: 582 YAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITF 641
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
+ C ++A++ G+ LHG K E + +AL+ MY KCGS+ +A F+ V
Sbjct: 642 MILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEV 701
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+KDV WN MI+ ++ HG ++A +F M+ +GI PD IT V +LSAC+ GLVE+G +
Sbjct: 702 EKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWK 761
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLY 588
YF SM YGV +HYTCMV +LG AG LDEA + ++ MP+ PDA W LL ACR++
Sbjct: 762 YFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVH 821
Query: 589 GKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSW 648
E+ E+AA+ +FE+EP+NA Y+LLSN+Y +SG W +R MR R + + S+
Sbjct: 822 SNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSY 881
Query: 649 LEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLR 708
L V + TF G++ HPE + I + L K++ G+ + V D E+E +
Sbjct: 882 LTVGSHXCTFKGGESSHPELEEILETWDXLARKMELSGY-FPLDPVFDD-EEKELDPFSC 939
Query: 709 YHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFS 768
H+EKLA+ +GI+S RP+ V KN+R+C DCH + K ISKI GR I ++D +HH
Sbjct: 940 LHTEKLAICFGIISSNXYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMK 999
Query: 769 GGSCSCGDYW 778
G C C D W
Sbjct: 1000 DGICXCQDRW 1009
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/563 (27%), Positives = 270/563 (47%), Gaps = 78/563 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----K 151
NA+I Y G L +R VF M +RD+VSW +IS Y+ A+++F +M K
Sbjct: 222 NALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVK 281
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
D++SW+ +LSG+A+NG D A + M L+ SWNG+++ VQNG +E+A +
Sbjct: 282 PDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDM 341
Query: 208 FESKANW-----EVVSWNSLMGGF--VKQKRLGDAKWIFDRMPVRDEVSWNTMITG---- 256
F S+ W +++ S++ +K RLG A + + + N + G
Sbjct: 342 F-SRMLWYPEDPNIITIASILPACTGLKALRLGKA---IHXIAXKHGIVGNVYVEGSVID 397
Query: 257 -YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
Y++ A+++F +A K+ W M++ YV GKV++A + +M + W
Sbjct: 398 MYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDG---WKP- 453
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ----HDC 371
+V ++NT+++G+A++G T A L M Q +
Sbjct: 454 -----------------------DVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNV 490
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE------------RLNRSPFTSVLSTCANL 419
+S+ +I+G+ QSG S ++L++F M+ + R N T L CA+L
Sbjct: 491 VSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADL 550
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
GK++HG ++ GFE FV +AL+ MY KC ++ A F I ++ +SWN ++
Sbjct: 551 NLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALM 610
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYG 538
AGY + ++AL LF M G++P IT + + AC + G + Y+
Sbjct: 611 AGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLD 670
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ N+ + ++D+ + G + +A+++ + E D W A++ A ++G +A A
Sbjct: 671 ELKNAI-XSALIDMYAKCGSILDAKSVFDS-EVEKDVPLWNAMISAFSVHG---MARNAF 725
Query: 599 EVIFEME-----PENAGMYVLLS 616
V +ME P++ LLS
Sbjct: 726 AVFXQMELLGIXPDHITFVSLLS 748
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 138/608 (22%), Positives = 249/608 (40%), Gaps = 158/608 (25%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ W I+ +M G D A H+F+ M + +S++A++SG+ NG++D A +
Sbjct: 248 DVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETL 307
Query: 116 DQMPQRDLV----SWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSG---- 163
++MP+R L SWN +ISG V+N L A ++F M ++++ ++L
Sbjct: 308 EEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGL 367
Query: 164 -------------------------------YAQNGYADAARRIFDRMLEKNEISWNGLL 192
Y++ G D A ++F + KN WN ++
Sbjct: 368 KALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMI 427
Query: 193 AAYVQNGRIEEACMLFES--KANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR--- 245
AAYV G++E+A L S K W +V+++N+++ G + A + M
Sbjct: 428 AAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLK 487
Query: 246 -DEVSWNTMITGYAQNNYLAEAQRLFE--EAPV--------------------------- 275
+ VS+N +I+G+ Q+ EA ++F ++P
Sbjct: 488 PNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPAC 547
Query: 276 ----------------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
++F +A+V Y + +D A +F + +NTVSWN
Sbjct: 548 ADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWN 607
Query: 314 AMIAGYVQTKRMDMARELFEAM-----------------TCKNVAS-------------- 342
A++AGY+ K+ + A +LF M C ++A+
Sbjct: 608 ALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKC 667
Query: 343 ---------WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
+ +I YA+ G I A+++FD + D W A+I+ ++ G + ++ +
Sbjct: 668 QLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAV 727
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYC 452
F +M+ G + F S+LS CA +E G K + + G A ++ +
Sbjct: 728 FXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILG 787
Query: 453 KCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG---FG-KDALMLFESMKTVGIKPDD 507
G ++EA ++ D W T++ H G + A LFE ++PD+
Sbjct: 788 GAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFE------LEPDN 841
Query: 508 ITMVGILS 515
T +LS
Sbjct: 842 ATNYMLLS 849
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 8/301 (2%)
Query: 344 NTMITGYAQSG-EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N ++ Y ++ + AR L D +P ++AA+I Y +S ++ F M G
Sbjct: 120 NKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGM 179
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
++ ++L C+ + +GK +HG +++ E+ FVGNAL+ Y CG + +
Sbjct: 180 LPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRS 239
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F + ++DV+SW +I+ Y G +A +F M+ G+KPD I+ +LS + G
Sbjct: 240 VFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGE 299
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM---PFEPDAATWG 579
++ E M + G+ P + ++ + G L++A ++ M P +P+ T
Sbjct: 300 IDLALETLEEM-PERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIA 358
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS--NLYAASGRWGDVSKVRLKMRD 637
++L AC L KA I +YV S ++Y+ G + KV K +
Sbjct: 359 SILPACTGLKALRLG-KAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAEN 417
Query: 638 R 638
+
Sbjct: 418 K 418
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 158/381 (41%), Gaps = 55/381 (14%)
Query: 45 LNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMIS 100
L S ++ KP D+ +N ++ H RNG A + + M + + VS+N +IS
Sbjct: 443 LRSMQKDGWKP----DVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLIS 498
Query: 101 GYLLNGQLDPARQVFDQMPQ-RDLVSWNVMISGYVRNKSLSAA----------------- 142
G+ +G A +VF M D + N +++ +R ++
Sbjct: 499 GFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKE 558
Query: 143 ------RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
RN FE ++ + ++ YA+ D+A ++F R+ +N +SWN L+A Y+
Sbjct: 559 IHGYTLRNGFE----PNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYI 614
Query: 197 QNGRIEEACMLF-ESKANWEVVSWNSLM-----GGFVKQKRLGDAKWIFDRMPVRDEVS- 249
N + EEA LF E S + M G + R G + DE+
Sbjct: 615 NNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKN 674
Query: 250 --WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-- 305
+ +I YA+ + +A+ +F+ KDV W AM+S + +G A +F M
Sbjct: 675 AIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELL 734
Query: 306 --EKNTVSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITH 358
+ +++ ++++ + ++ + F +M + + M+ +G +
Sbjct: 735 GIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDE 794
Query: 359 ARNLFDRMP-QHDCISWAAII 378
A + +MP D WA ++
Sbjct: 795 ALDFIRQMPYPPDACMWATLL 815
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/675 (36%), Positives = 367/675 (54%), Gaps = 54/675 (8%)
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFESKAN 213
N +L+ Q A +I +++ N S +N L+ Y + G + +A +LF +
Sbjct: 146 NHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHH 205
Query: 214 W--EVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQ 267
+V+W SL+ A +F++M P ++ +++++++ A + Q
Sbjct: 206 HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265
Query: 268 RLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
+L + ++F TA+V Y + + A +FD MPE+N VSWN+MI G+
Sbjct: 266 QLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN 325
Query: 324 RMDMARELF-----EAMTCKNVASWNTMITGYAQSGEITHARN----------------- 361
D A +F E N S +++++ A G + R
Sbjct: 326 LYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVM 385
Query: 362 ------------------LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
LF + D ++W ++ G+ Q+ E++ F M+R G
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL 445
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ + F++VL + A+LA+L G +H Q++K+G+ + +L+ MY KCGS+ +AY
Sbjct: 446 PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQV 505
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
FE I D +VISW MI+ Y HG + LFE M + GI+P +T V +LSACSHTG V
Sbjct: 506 FEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRV 565
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E+G +F SM + + + P +HY CMVDLLGRAG LDEA+ +++MP +P + WGALLG
Sbjct: 566 EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKV 643
ACR YG ++ +AAE +FEMEP N G YVLL+N+ SGR + ++VR M GV+K
Sbjct: 626 ACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 685
Query: 644 TGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G SW++V+N F+ D H D IY LE+LE +K+ G+V T+ V + + E E+
Sbjct: 686 PGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEE 745
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
E L YHSEKLA+A+G+L++P PIR+ KNLR C CH +K SKI R II+RD NR
Sbjct: 746 EQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINR 805
Query: 764 FHHFSGGSCSCGDYW 778
FH F+ G CSCGDYW
Sbjct: 806 FHRFADGFCSCGDYW 820
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 191/401 (47%), Gaps = 50/401 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMPKRDV 154
A++ Y + A +VFDQMP+R+LVSWN MI G+ N A +F +++ ++ V
Sbjct: 284 TALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTV 343
Query: 155 ----VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----NGLLAAYVQNGRIEEACM 206
VS +++LS A G + R++ +++ + N L+ Y + +E
Sbjct: 344 IPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVK 403
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAK---WIFDRMPV-RDEVSWNTMITGYAQNNY 262
LF+ + +VV+WN L+ GFV+ + +A W+ R + DE S++T++ A
Sbjct: 404 LFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAA 463
Query: 263 LAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
L + + ++ VK++ ++++ Y + G + +A +F+ + + N +SW AMI+
Sbjct: 464 LHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISA 523
Query: 319 YVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRM-------- 366
Y + ELFE M + + ++ +++ + +G + F+ M
Sbjct: 524 YQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNP 583
Query: 367 -PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV----LSTCANLAS 421
P+H +A ++ ++G+ + E KR+ E + P SV L C +
Sbjct: 584 GPEH----YACMVDLLGRAGWLD-------EAKRFIESMPMKPTPSVWGALLGACRKYGN 632
Query: 422 LELGKQLHGQLVKV-GFEAGCFVGNALLVMYC-KCGSVEEA 460
L++G++ +L ++ + G +V LL C + G +EEA
Sbjct: 633 LKMGREAAERLFEMEPYNPGNYV---LLANMCTRSGRLEEA 670
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 326/553 (58%), Gaps = 9/553 (1%)
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNN----YLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
A+ +FD D WN MI G++ ++ L QR+ + + +T+ +++
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 291 NGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
+E I + E + + N++I Y T +A LF+ + + SWN++
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I GY ++G++ A LF +M + + ISW +I+GY Q+ ++++L+LF EM+ +
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+ LS CA L +LE GK +H L K +G L+ MY KCG +EEA F+
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I K V +W +I+GYA HG G++A+ F M+ +GIKP+ IT +L+ACS+TGLVE+G
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
FYSM RDY + P +HY C+VDLLGRAG LDEA+ ++ MP +P+A WGALL ACR
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++ EL E+ E++ ++P + G YV +N++A +W ++ R M+++GV KV G
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD-VGEEEKEH 705
S + ++ H F GD HPE ++I + + KL+++G+V + +L D V ++E+E
Sbjct: 488 STISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREA 547
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
++ HSEKLA+ YG++ G IR+MKNLRVC+DCH K ISKI R I++RD RFH
Sbjct: 548 IVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFH 607
Query: 766 HFSGGSCSCGDYW 778
HF G CSCGDYW
Sbjct: 608 HFRDGKCSCGDYW 620
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 16/304 (5%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAA 194
L A+ +F+ + D WN M+ G++ + + + ++ RML N ++ LL A
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 195 YVQNGRIEEACMLFE--SKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
EE + +K +E V + NSL+ + A +FDR+P D+VSW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----E 306
N++I GY + + A LF + K+ +WT M+SGYVQ EA +F M E
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN----TMITGYAQSGEITHARNL 362
+ VS ++ Q ++ + + + + + +I YA+ GE+ A +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F + + +W A+I+GYA G+ +++ F+EM++ G + N FT+VL+ C+ +
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 423 ELGK 426
E GK
Sbjct: 365 EEGK 368
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 33/265 (12%)
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ +A+ +FD + D W +I G++ S E SL L+ M N F S+L
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C+NL++ E Q+H Q+ K+G+E + N+L+ Y G+ + A+ F+ I + D +SW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 476 NTMIAGYARHG-------------------------------FGKDALMLFESMKTVGIK 504
N++I GY + G K+AL LF M+ ++
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD++++ LSAC+ G +E+G ++ +S + +S ++D+ + G ++EA
Sbjct: 245 PDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 565 LMKNMPFEPDAATWGALLGACRLYG 589
+ KN+ + W AL+ +G
Sbjct: 304 VFKNIK-KKSVQAWTALISGYAYHG 327
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 22/320 (6%)
Query: 77 CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN 136
C SA H + P N +S + Q+ Q+ + D+ + N +I+ Y
Sbjct: 108 CSSAPHNAYTFPSLLKACSN--LSAFEETTQIHA--QITKLGYENDVYAVNSLINSYAVT 163
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ A LF+ +P+ D VSWN+++ GY + G D A +F +M EKN ISW +++ YV
Sbjct: 164 GNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV 223
Query: 197 QNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWI---FDRMPVR-DEV 248
Q +EA LF N +V VS + + + L KWI ++ +R D V
Sbjct: 224 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 283
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP--- 305
+I YA+ + EA +F+ K V WTA++SGY +G EA F M
Sbjct: 284 LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 343
Query: 306 -EKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHA 359
+ N +++ A++ T ++ + +F +M + + ++ ++G + A
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 360 RNLFDRMP-QHDCISWAAII 378
+ MP + + + W A++
Sbjct: 404 KRFIQEMPLKPNAVIWGALL 423
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 172/400 (43%), Gaps = 68/400 (17%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISG--------------------------YVRNKSLSA 141
L A+ VFD + D WN+MI G Y L A
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 142 ARNL--FEMMPK-----------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
NL FE + DV + N++++ YA G A +FDR+ E +++SW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR--- 245
N ++ YV+ G+++ A LF A +SW +++ G+V+ +A +F M
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 246 -DEVSWNTMITGYAQNNYLAEAQRL---FEEAPVK-DVFTWTAMVSGYVQNGKVDEARMI 300
D VS ++ AQ L + + + + ++ D ++ Y + G+++EA +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 301 FDAMPEKNTVSWNAMIAGYVQ--------TKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
F + +K+ +W A+I+GY +K M+M + + NV ++ ++T +
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP----NVITFTAVLTACSY 360
Query: 353 SGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
+G + + +F M + + + I+ ++G +++ R EM + N
Sbjct: 361 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL---KPNAV 417
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNA 446
+ ++L C ++ELG+++ L+ + + G +V A
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKA 457
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 20/295 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I ++ G A +F+ +P VS+N++I GY+ G++D A +F +M
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARR 175
+++ +SW MISGYV+ A LF M DV VS LS AQ G + +
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 176 IFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
I L K I + +L Y + G +EEA +F++ V +W +L+ G+
Sbjct: 269 IHS-YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 231 RLGDAKWIF---DRMPVRDEV-SWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFT-W 281
+A F +M ++ V ++ ++T + + E + +F + +K +
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMARELFEAM 335
+V + G +DEA+ MP K N V W A++ K +++ E+ E +
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 442
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/756 (33%), Positives = 383/756 (50%), Gaps = 105/756 (13%)
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
P L N +++ Y R AR L + MP+R+ VS+N ++ Y++ G A +
Sbjct: 39 PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98
Query: 179 RM----LEKNEISWNGLL-----AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R ++ + S+ L A +++ GR A + + ++ VS NSL+ + K
Sbjct: 99 RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVS-NSLVSMYSKC 157
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------------------- 270
+G+A+ +FD RD+VSWN++++GY + E R+F
Sbjct: 158 GEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVI 217
Query: 271 ----------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ DVF +AM+ Y + G + EA +F ++ E N
Sbjct: 218 KCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM---------------ITGYAQS 353
V +N MIAG+ +T+ + EA+T + M + GY +
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337
Query: 354 GEITHARNL------------------------------FDRMPQHDCISWAAIIAGYAQ 383
G+ H + + F P+HD ++W A+++G Q
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+ E +L LF E G + + +SV++ CA+LA G+Q+ K GF+ +
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVM 457
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
GN+ + MY + G V+ A F+E+ DV+SW+ +I+ +A+HG +DAL F+ M +
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKV 517
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
P++IT +G+L+ACSH GLV++G Y+ +M +DYG+ P KH TC+VDLLGRAGRL +A+
Sbjct: 518 VPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ N F D W +LL +CR++ E + A I E+EP ++ YV+L N+Y +G
Sbjct: 578 AFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAG 637
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
SK R M+ RGVKK G SW+E++ VH+F GD HPE IY LEE+ +++
Sbjct: 638 ELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIE 697
Query: 684 QDGFVYSTKLVLHDVGEEEKEH-MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
KL D ++E ++ HSEKLAVA G++ +P PIRVMKNLRVC DCH
Sbjct: 698 --------KLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCH 749
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ +K ISK R IILRD RFHHF GSCSC DYW
Sbjct: 750 STMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 211/493 (42%), Gaps = 92/493 (18%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
H+R G AL + + + VS N+++S Y G++ AR+VFD +RD VSWN ++
Sbjct: 124 HLRAGRAVHALAILDGLSSGVFVS-NSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLV 182
Query: 131 SGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY---AQNGYADAARRIFDRM------- 180
SGYVR + +F MM +R + N+ G +G D I + +
Sbjct: 183 SGYVRAGAREEMVRVFAMM-RRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKA 241
Query: 181 -LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL------G 233
L+ + + ++ Y + G + EA LF S VV +N+++ GF + + +
Sbjct: 242 GLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVAS 301
Query: 234 DAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRL--------FEEAPVKDVFTW 281
+A ++ + R E ++++++ YL +++ F+E D F
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQE----DDFIG 357
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF--------- 332
+A++ Y +G +++ F + P+ + V+W AM++G VQ + + A LF
Sbjct: 358 SALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLK 417
Query: 333 ----------------------EAMTCKNVAS--------WNTMITGYAQSGEITHARNL 362
E + C S N+ + YA+SG++ A
Sbjct: 418 PDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRR 477
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F M HD +SW+A+I+ +AQ G + D+L F EM N F VL+ C++ +
Sbjct: 478 FQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLV 537
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC--------GSVEEAYHAF--EEIVDKDV 472
+ G + + + K G + + +C C G + +A AF I D
Sbjct: 538 DEGLRYYETMTKD-------YGLSPTIKHCTCVVDLLGRAGRLADA-EAFISNSIFHADP 589
Query: 473 ISWNTMIAGYARH 485
+ W +++A H
Sbjct: 590 VIWRSLLASCRIH 602
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 59/309 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF------------ 115
I + +GC + F S P+ V++ AM+SG + N + A +F
Sbjct: 361 IDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDL 420
Query: 116 -------------------DQMP--------QRDLVSWNVMISGYVRNKSLSAARNLFEM 148
+Q+ R V N + Y R+ + AA F+
Sbjct: 421 FTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQE 480
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA 204
M DVVSW+ ++S +AQ+G A A FD M++ NEI++ G+L A G ++E
Sbjct: 481 MESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEG 540
Query: 205 CMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAK-WIFDRMPVRDEVSWNTMITGYA 258
+E+ + + ++ + RL DA+ +I + + D V W +++
Sbjct: 541 LRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCR 600
Query: 259 QNNYLAEAQ----RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----- 309
+ L Q R+ E P ++ + + Y+ G++ A D M ++
Sbjct: 601 IHRDLERGQLVANRIMELEPTSSA-SYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPG 659
Query: 310 VSWNAMIAG 318
+SW + G
Sbjct: 660 LSWIELKCG 668
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 122/333 (36%), Gaps = 74/333 (22%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYL---------- 103
K D D+ + I + + G A +F S+ + V +N MI+G+
Sbjct: 240 KAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEV 299
Query: 104 -------------------------------LNGQLDPARQVFDQMP----QRDLVSWNV 128
L G L+ +Q+ Q+ Q D +
Sbjct: 300 ASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSA 359
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+I Y + + F PK D+V+W M+SG QN + A +F +E
Sbjct: 360 LIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLF------HESLG 413
Query: 189 NGLLAAYVQNGRIEEACM-LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
GL + AC L ++A ++ + + G FDR V
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG--------------FDRFTVMG- 458
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
N+ + YA++ + A R F+E DV +W+A++S + Q+G +A FD M +
Sbjct: 459 ---NSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDA 515
Query: 308 ----NTVSWNAMIAGYVQTKRMDMARELFEAMT 336
N +++ ++ +D +E MT
Sbjct: 516 KVVPNEITFLGVLTACSHGGLVDEGLRYYETMT 548
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 346/562 (61%), Gaps = 14/562 (2%)
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMIT-----GYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
RL + I R+ + ++IT YA + ++ +RLF P D F + +++
Sbjct: 31 RLKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLI 90
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK------- 338
+ + E+ + + M N S N + +++ A + E + C
Sbjct: 91 TLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYG 150
Query: 339 -NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
+ +++ YA+SG + AR +FD+MP+ ++W ++I+GY Q+G+ ++++ LF M
Sbjct: 151 LDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLM 210
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
+ G + + S F S+LS CA + ++ LG +H + + F+ +G AL+ MY +CG+V
Sbjct: 211 QDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNV 270
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
+A F+ + +K++++W MI+GY HG G A+ LF M G +P+++T V +LSAC
Sbjct: 271 SKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSAC 330
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM-PFEPDAA 576
+H GLV++G + F +M ++YG++P+ +H CMVD+LGRAG L+EA +KN P EP A
Sbjct: 331 AHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPA 390
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W A+LGAC+++ +L + AE + +EPEN G YV+LSN+YA +GR V K+R M
Sbjct: 391 VWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMI 450
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
+KK GYS ++V +KV+ FS+GD HP+ ++IY YL+EL + ++ G++ +++ V+H
Sbjct: 451 RNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMH 510
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
+V EEE+E+ LRYHSEKLA+A+G+L +G IR++KNLR+CEDCH AIK+IS I R I
Sbjct: 511 EVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREI 570
Query: 757 ILRDNNRFHHFSGGSCSCGDYW 778
+RD RFHHF GSCSC DYW
Sbjct: 571 NVRDRLRFHHFKDGSCSCQDYW 592
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMIS-----GYVRNKSLSAARNLFEMM 149
Y+++I L +L P +Q+ ++ L +I+ Y +S R LF +
Sbjct: 22 YHSII---LAGPRLKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSI 78
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----- 204
PK D ++++++ ++ + + + RML N S N +A +++ A
Sbjct: 79 PKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGE 138
Query: 205 ---CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
C ++ + +L+ + K + A+ +FD+MP + V+WN+MI+GY QN
Sbjct: 139 TIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNG 198
Query: 262 YLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDE--------ARMIFDAMPEKNT 309
+ EA LF ++ VK D T+ +++S Q G + AR FD N
Sbjct: 199 FGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDL----NV 254
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM--- 366
V A++ Y + + ARE+F++M KN+ +W MI+GY G + A LF+ M
Sbjct: 255 VLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFD 314
Query: 367 -PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR-YG 401
P+ + +++ A+++ A +G ++ ++F MK+ YG
Sbjct: 315 GPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYG 351
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 33/298 (11%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KR 152
A++S Y +G + AR+VFD+MP++ +V+WN MISGY +N A LF +M K
Sbjct: 158 ALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKP 217
Query: 153 DVVSWNTMLSGYAQNG--------YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
D ++ ++LS AQ G + AR FD N + L+ Y + G + +A
Sbjct: 218 DSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDL----NVVLGTALMNMYSRCGNVSKA 273
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM----PVRDEVSWNTMITGYAQN 260
+F+S +V+W +++ G+ A +F+ M P + V++ +++ A
Sbjct: 274 REVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHA 333
Query: 261 NYLAEAQRLF-----EEAPVKDVFTWTAMVSGYVQNGKVDEA-RMIFDAMP-EKNTVSWN 313
+ E +++F E V V MV + G ++EA + I + P E W
Sbjct: 334 GLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWT 393
Query: 314 AMIAGYVQTKRMDMARELFE---AMTCKNVASWNTMITGYAQSG---EITHARNLFDR 365
AM+ K D+ E+ E ++ +N + + YA +G + RN+ R
Sbjct: 394 AMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIR 451
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ + + R G A VF+SM ++ V++ AMISGY ++G A ++F++
Sbjct: 251 DLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNE 310
Query: 118 M----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK 151
M P+ + V++ ++S + R +F M +
Sbjct: 311 MSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQ 348
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/672 (36%), Positives = 369/672 (54%), Gaps = 72/672 (10%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
L A ++FE +P+ + + WN M G+A + +A +++ M+ GLL +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISL------GLLPNFFTF 78
Query: 199 GRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
+ ++C ++ + + + L GF D ++I+ YA
Sbjct: 79 PFLLKSCAKSKTFKEGQQIHGHVLKLGFD-----------------LDLYVHTSLISMYA 121
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
QN L +AQ++F+ + +DV ++TA+++GY G ++ A+ +FD +P K+ VSWNAMI+G
Sbjct: 122 QNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISG 181
Query: 319 YVQTKRMDMARELFEAMTCKNVA--------------------------SW--------- 343
Y +T A ELF+ M NV SW
Sbjct: 182 YAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSN 241
Query: 344 ----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N +I Y++ GE+ A L + + D ISW +I GY +++L LF EM R
Sbjct: 242 LKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 301
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA------LLVMYCK 453
GE N S+L CA+L ++++G+ +H + K G V NA L+ MY K
Sbjct: 302 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMYAK 359
Query: 454 CGSVEEAYHAFEE-IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
CG ++ A + ++ + +WN MI G+A HG A +F M+ GI+PDDIT VG
Sbjct: 360 CGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 419
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+LSACSH+G+++ G F SM +DY + P +HY CM+DLLG +G EA+ ++ MP E
Sbjct: 420 LLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME 479
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
PD W +LL AC+++G EL E A+ + ++EPEN G YVLLSN+YA +G+W +V K+R
Sbjct: 480 PDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIR 539
Query: 633 LKMRDRGV-KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
+ D+G+ KKV G S +E+ + VH F +GD LHP+ IY LEE+E L++ GFV T
Sbjct: 540 TLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDT 599
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A K ISKI
Sbjct: 600 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 659
Query: 752 VGRLIILRDNNR 763
R II RD R
Sbjct: 660 YKREIIARDRTR 671
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 192/412 (46%), Gaps = 41/412 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ I+ + +NG + A VF+ R VSY A+I+GY G ++ A+++FD+
Sbjct: 107 DLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDE 166
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLF-EMMP---KRDVVSWNTMLSGYAQNGYADAA 173
+P +D+VSWN MISGY + A LF EMM K D + T++S AQ+G +
Sbjct: 167 IPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELG 226
Query: 174 RRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
R++ D N N L+ Y + G +E AC L E +N +V+SWN+L+GG+
Sbjct: 227 RQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHM 286
Query: 230 KRLGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVFTW-- 281
+A +F M E + TM++ +L ++ + +K V
Sbjct: 287 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNA 346
Query: 282 ----TAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDMARELFEAMT 336
T+++ Y + G +D A + D+ ++S WNAMI G+ R + A ++F M
Sbjct: 347 SSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMR 406
Query: 337 CKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYS 387
+ ++ +++ + SG + RN+F M Q I+ + +I SG
Sbjct: 407 KNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSG-- 464
Query: 388 EDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C +LELG+ +L+K+
Sbjct: 465 -----LFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKI 511
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/679 (35%), Positives = 378/679 (55%), Gaps = 58/679 (8%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARR--IFDRM----LEKNEISWNGLL 192
L A +LF+ MP + ++T L ++ G +D R +F RM + + +++ L
Sbjct: 53 LRYALHLFDRMPPSTFL-FDTALRACSRAG-SDPHRPFLLFRRMRRAGVRPDGFTFHFLF 110
Query: 193 AAYVQNGR---------IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ R + AC+ + VS NSL+ +++ DA+ FD +
Sbjct: 111 KCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVS-NSLIHMYIRLGLAADARRAFDEIH 169
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
V+D V+W +I+G A+ L + Q L +APV+DV +WT++++ Y + + EA F
Sbjct: 170 VKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKT 229
Query: 304 M------PEKNTV------------------------------SWN---AMIAGYVQTKR 324
M P++ TV S N A+I Y +
Sbjct: 230 MLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGD 289
Query: 325 MDMARELFEAM-TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
A+++F+A+ SWN +I GY + G + AR+LFD M D I++ +++ GY
Sbjct: 290 FGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIH 349
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
SG ++L LF+ M+R+ R++ ++L+ CA+L +L+ G+ LH + + EA ++
Sbjct: 350 SGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYL 409
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
G ALL MY KCG V+EA F+ + +DV +W MIAG A +G GK AL F M+ G
Sbjct: 410 GTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGF 469
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ ++ + +L+ACSH+ L+ +G YF M Y + P +HY CM+DLLGR+G LDEA
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAM 529
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+L+K MP +P+A W ++L ACR++ +LA+ AAE + ++EP+ G+YV L N+Y S
Sbjct: 530 DLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSR 589
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W + SK+R+ M +R VKK GYS + V +VH F V D HP I A LEE+ +LK
Sbjct: 590 QWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLK 649
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
G+ T + DV EEEKE L HSEKLA+A+G++++ P+ + KNLRVCEDCH+
Sbjct: 650 SLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHS 709
Query: 744 AIKHISKIVGRLIILRDNN 762
AIK IS++ R II+RD +
Sbjct: 710 AIKLISRLWNREIIVRDRS 728
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 219/478 (45%), Gaps = 69/478 (14%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
+P + N++I Y+ G AR+ FD++ +D V+W ++ISG + L + L
Sbjct: 137 LPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLL 196
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIE 202
P RDV+SW ++++ Y++ A A F ML +E++ +L+A + +E
Sbjct: 197 SQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLE 256
Query: 203 ---EACMLFESKANWEVVSWN---SLMGGFVKQKRLGDAKWIFD---RMPVRDEVSWNTM 253
+L E K S N +L+ + K G A+ +FD R P R + SWN +
Sbjct: 257 LGRSLHLLVEEKGM--PTSENLVVALIDMYAKCGDFGHAQQVFDALGRGP-RPQ-SWNAI 312
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE-----KN 308
I GY ++ ++ A+ LF+E V+D+ T+ +M++GY+ +G++ EA ++F +M N
Sbjct: 313 IDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDN 372
Query: 309 TVSWNAMIA----GYVQTKRMDMA---RELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
N + A G +Q R A + L EA ++ ++ Y + G + A
Sbjct: 373 FTVVNLLTACASLGALQQGRALHACIEQRLVEA----DIYLGTALLDMYMKCGRVDEATI 428
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+F RM + D +W A+IAG A +G + +L F +M+ G + N + +VL+ C++
Sbjct: 429 VFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCL 488
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L G+ + + ++Y +E + MI
Sbjct: 489 LNEGR---------------LYFDEMRILYNIHPQIEH---------------YGCMIDL 518
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRD 536
R G +A+ L +KT+ I+P+ + ILSAC H L + E+ + D
Sbjct: 519 LGRSGLLDEAMDL---VKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPD 573
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 185/430 (43%), Gaps = 64/430 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I ++R G A F+ + + +V++ +ISG G L + + Q P RD++
Sbjct: 146 NSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVI 205
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRM 180
SW +I+ Y R A F+ M D V+ +LS A+ + R + +
Sbjct: 206 SWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLV 265
Query: 181 LEKNEISWNGLLAA----YVQNGRIEEACMLFESKANW-EVVSWNSLMGGFVKQKRLGDA 235
EK + L+ A Y + G A +F++ SWN+++ G+ K + A
Sbjct: 266 EEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVA 325
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF------------------------- 270
+ +FD M VRD +++N+M+TGY + L EA LF
Sbjct: 326 RSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASL 385
Query: 271 -------------EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
E+ V+ D++ TA++ Y++ G+VDEA ++F M +++ +W AMI
Sbjct: 386 GALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMI 445
Query: 317 AGYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRM------ 366
AG A E F M C N S+ ++T + S + R FD M
Sbjct: 446 AGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNI 505
Query: 367 -PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
PQ + + +I +SG ++++ L +K + N + S+LS C ++L
Sbjct: 506 HPQIE--HYGCMIDLLGRSGLLDEAMDL---VKTMPIQPNAVIWASILSACRVHKHIDLA 560
Query: 426 KQLHGQLVKV 435
+ L+K+
Sbjct: 561 QCAAEHLLKL 570
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 39/287 (13%)
Query: 53 PKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR 112
P+P + WN I + ++G D A +F+ M R +++N+M++GY+ +GQL A
Sbjct: 304 PRP------QSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREAL 357
Query: 113 QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+F M + DL N + L+A +L G Q G A
Sbjct: 358 LLFMSMRRHDLRVDNFTVVNL-----LTACASL-----------------GALQQGRALH 395
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
A I R++E + LL Y++ GR++EA ++F+ +V +W +++ G
Sbjct: 396 A-CIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMG 454
Query: 233 GDAKWIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWTA 283
A F +M + VS+ ++T + + L E + F+E + + +
Sbjct: 455 KAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGC 514
Query: 284 MVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMAR 329
M+ ++G +DEA + MP + N V W ++++ K +D+A+
Sbjct: 515 MIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQ 561
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/573 (37%), Positives = 341/573 (59%), Gaps = 13/573 (2%)
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEA 273
++++L+ V + + K +F+ M D N ++ + + + +A++LF+E
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR 329
P KD+ +W M+ G+V +G EA +F M E+ + ++ MI + + R
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGR 238
Query: 330 ELFEAMTCKNVASWN----TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ + V +I Y++ G I A +FD+MP+ + W +IIA YA G
Sbjct: 239 QIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 298
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
YSE++L + EM+ G +++ + V+ CA LASLE KQ H LV+ G++
Sbjct: 299 YSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANT 358
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ Y K G +E+A+H F + K+VISWN +IAGY HG G++A+ +FE M G+ P
Sbjct: 359 ALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIP 418
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ +T + +LSACS++GL E+G E FYSM+RD+ V P + HY CMV+LLGR G LDEA L
Sbjct: 419 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYEL 478
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+++ PF+P W LL ACR++ EL + AAE ++ MEPE Y++L NLY +SG+
Sbjct: 479 IRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKL 538
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
+ + V ++ +G++ + +W+EV+ + + F GD H + IY + + ++ +
Sbjct: 539 KEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRH 598
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+V K +L DV EEE + +L+YHSEKLA+A+G+++ P P+++ + RVC DCH+AI
Sbjct: 599 GYVEENKALLPDVDEEE-QRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAI 657
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K I+ + GR I++RD +RFHHF GSCSCGDYW
Sbjct: 658 KFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
+Y+A++S + + ++VF+ M + DL N ++ +V+ + AR LF+ M
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178
Query: 150 PKRDVVSWNTMLSGYAQNG---------------YADAARRIFDRMLEKNEISWNGLLAA 194
P++D+ SW TM+ G+ +G + D R F M+ + GL
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASA----GL--G 232
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
VQ GR +C L + VS +L+ + K + DA +FD+MP + V WN++I
Sbjct: 233 LVQVGRQIHSCALKRGVGDDTFVSC-ALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSII 291
Query: 255 TGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK--- 307
YA + Y EA + E D FT + ++ + ++ A+ A+ +
Sbjct: 292 ASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYD 351
Query: 308 -NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM 366
+ V+ A++ Y + RM+ A +F M KNV SWN +I GY G+ A +F++M
Sbjct: 352 TDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQM 411
Query: 367 ------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
P H +++ A+++ + SG SE +F M R
Sbjct: 412 LREGMIPNH--VTFLAVLSACSYSGLSERGWEIFYSMSR 448
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 178/430 (41%), Gaps = 68/430 (15%)
Query: 37 SKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYN 96
S + +KR N + +P D+ N + H++ G A +F+ MP + S+
Sbjct: 132 SIRGVKRVFNYMVNSGFEP----DLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWM 187
Query: 97 AMISGYLLNGQLDPARQVF----DQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
MI G++ +G A +F ++ ++ MI + R + KR
Sbjct: 188 TMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKR 247
Query: 153 ----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
D ++ Y++ G + A +FD+M EK + WN ++A+Y +G EEA +
Sbjct: 248 GVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFY 307
Query: 209 ----ESKA-----------------------------------NWEVVSWNSLMGGFVKQ 229
+S A + ++V+ +L+ + K
Sbjct: 308 YEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKW 367
Query: 230 KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMV 285
R+ DA +F+RM ++ +SWN +I GY + EA +FE E + + T+ A++
Sbjct: 368 GRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVL 427
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNV 340
S +G + IF +M + V + M+ + +D A EL + K
Sbjct: 428 SACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPT 487
Query: 341 AS-WNTMITGY-----AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+ W T++T + G++ A NL+ P+ C ++ ++ Y SG +++ +
Sbjct: 488 TNMWATLLTACRMHENLELGKLA-AENLYGMEPEKLC-NYIVLLNLYNSSGKLKEAAGVL 545
Query: 395 IEMKRYGERL 404
+KR G R+
Sbjct: 546 QTLKRKGLRM 555
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Query: 389 DSLRLF--IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+++ LF +E++ G + S + +++S C L S+ K++ +V GFE +V N
Sbjct: 98 EAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNR 157
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+L ++ KCG + +A F+E+ +KD+ SW TMI G+ G +A LF M
Sbjct: 158 VLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGR 217
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
T ++ A + GLV+ G + +S GV ++ ++D+ + G +++A +
Sbjct: 218 SRTFTTMIRASAGLGLVQVGRQ-IHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVF 276
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA 609
MP E W +++ + L+G +E+A +EM A
Sbjct: 277 DQMP-EKTTVGWNSIIASYALHG---YSEEALSFYYEMRDSGA 315
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/429 (45%), Positives = 293/429 (68%)
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
Y + G++ +A +F+ + D ++W ++I+G +G + +LR++ M++ + F
Sbjct: 75 YIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTF 134
Query: 410 TSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
+++ + + +LE G+QLH ++K+ + FVG +L+ MY KCG++E+AY F+++
Sbjct: 135 ATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV 194
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
+++ WN M+ G A+HG ++A+ LF+SMK+ GI+PD ++ +GILSACSH GL + EY
Sbjct: 195 RNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEY 254
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
+SM DYG+ P +HY+C+VD LGRAG + EA +++ MPF+ A+ ALLGACR+ G
Sbjct: 255 LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQG 314
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
E ++ A +F +EP ++ YVLLSN+YAA+ RW DV+ R M+ + VKK G+SW+
Sbjct: 315 DVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWI 374
Query: 650 EVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY 709
+V+N +H F V D HP+ D IY +EE+ +++DG+V T+ VL DV +EEKE L Y
Sbjct: 375 DVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYY 434
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSEKLA+AYG++S PA IRV+KNLRVC DCHNAIK+ISK+ R I+LRD NRFHHF
Sbjct: 435 HSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRD 494
Query: 770 GSCSCGDYW 778
G CSCGDYW
Sbjct: 495 GVCSCGDYW 503
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 10/242 (4%)
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
GY + +L LF + + GE+ ++ + C L L+ GKQ+H +K GF++
Sbjct: 4 GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 63
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
V + +L MY KCG + A F I D ++W +MI+G +G AL ++ M+
Sbjct: 64 DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 123
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
+ PD+ T ++ A S +E+G + ++ + + + T +VD+ + G +
Sbjct: 124 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIK-LDCVSDPFVGTSLVDMYAKCGNI 182
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVL 614
++A L K M + A W A+L +G AE+A + M EP+ +
Sbjct: 183 EDAYRLFKKMNVR-NIALWNAMLVGLAQHGN---AEEAVNLFKSMKSHGIEPDRVSFIGI 238
Query: 615 LS 616
LS
Sbjct: 239 LS 240
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 25/310 (8%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + +++ G +A VFN + V++ +MISG + NG D A +
Sbjct: 58 KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALR 117
Query: 114 VFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYA 165
++ +M Q D ++ +I +L R L + K D VS +++ YA
Sbjct: 118 IYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYA 177
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNS 221
+ G + A R+F +M +N WN +L Q+G EEA LF+S + + VS+
Sbjct: 178 KCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIG 237
Query: 222 LMGGFVKQKRLGDAKWIFDRMP----VRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPVK 276
++ +A MP + E+ ++ ++ + + EA ++ E P K
Sbjct: 238 ILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 297
Query: 277 D------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ G V+ GK AR+ A+ ++ ++ + Y R D +
Sbjct: 298 ASASINRALLGACRIQGDVEXGKRVAARLF--ALEPFDSAAYVLLSNIYAAANRWDDVTD 355
Query: 331 LFEAMTCKNV 340
+ M KNV
Sbjct: 356 ARKMMKRKNV 365
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 40/252 (15%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----N 184
++ Y++ + A +F + D V+W +M+SG NG D A RI+ RM + +
Sbjct: 71 ILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPD 130
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
E ++ L+ A +E+ L + + VS
Sbjct: 131 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVS-------------------------- 164
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
D +++ YA+ + +A RLF++ V+++ W AM+ G Q+G +EA +F +M
Sbjct: 165 -DPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSM 223
Query: 305 P----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGE 355
E + VS+ +++ A E +M + ++ ++ ++G
Sbjct: 224 KSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGL 283
Query: 356 ITHARNLFDRMP 367
+ A + + MP
Sbjct: 284 VQEADKVIETMP 295
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/510 (41%), Positives = 310/510 (60%), Gaps = 7/510 (1%)
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
++V+ + +S Y + G+ ++A +FD MP ++ VSWNAMIAG+ + D A E+F+
Sbjct: 156 RNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQF 215
Query: 336 TC--KNVASWNTMI-----TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
++ TM G A+ +I R +FD M + ISW A++A YA + +
Sbjct: 216 VVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHV 275
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++ LF+ M++ + +VL C L++ +GK++H + + + NAL+
Sbjct: 276 KAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALM 335
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY CG +++A F+ + +DVISW ++I+ Y +HG G++A+ LFE M G++PD I
Sbjct: 336 DMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSI 395
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
V +L+ACSH GL+ G YF SM Y +IP ++HYTCMVDLLGRAG ++EA + +
Sbjct: 396 AFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITT 455
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
M EP+ WGALL ACR++ ++ AA+ +F + PE G YVLLSN+YA +GRW DV
Sbjct: 456 MLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADV 515
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+ VR M ++G+KK G S +E+ ++VHTF +GD HP+ + IY L+EL K++ G+
Sbjct: 516 TSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYN 575
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
+ LHDV EE+KE L HSEKLA+A+ +L+ G IRV NLR C DCH A K I
Sbjct: 576 PEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLI 635
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
S I R I+L+D NR HH G CSCGDYW
Sbjct: 636 SIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 182/407 (44%), Gaps = 40/407 (9%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++ + AI+ + R G + A VF+ MP R VS+NAMI+G+ G D A +VF Q
Sbjct: 155 DRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQ 214
Query: 118 -------MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
MP ++ + G + + R +F+ M ++++SWN ML+ YA N +
Sbjct: 215 FVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFH 274
Query: 171 DAARRIFDRMLEKNEISWN-----------GLLAAYVQNGRIEEACMLFESKANWEVVSW 219
A +F ++EK+E+ + G L+A+ RI E ++ ++
Sbjct: 275 VKAVELF-MLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHE--IIKRKNMCPNLLLE 331
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPV 275
N+LM + L DA+ IFD M RD +SW ++I+ Y ++ + EA LFE +
Sbjct: 332 NALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLE 391
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARE 330
D + A+++ G + + + FD+M + + + M+ + ++ A +
Sbjct: 392 PDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYD 451
Query: 331 LFEAMTCK-NVASWNTMITGYAQSGE----ITHARNLFDRMPQHDCISWAAIIAG-YAQS 384
M + N W ++ + A NLF +P+ + +++ YA++
Sbjct: 452 FITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQ--TGYYVLLSNMYARA 509
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
G D + M G + + P TS++ + + +G + H Q
Sbjct: 510 GRWADVTSVRSVMVNKG--IKKFPGTSIVELGDQVHTFHIGDRCHPQ 554
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 159/348 (45%), Gaps = 42/348 (12%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-- 146
R ++V +N +I + A +F M R + + + KS SA+++L
Sbjct: 83 RTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLG 142
Query: 147 --------EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
++ R+V ++ +S Y++ G + A R+FD M ++ +SWN ++A + +
Sbjct: 143 LQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARV 202
Query: 199 GRIEEACMLFESKANWEVVSWNSL-----MGGFVKQKRLGDAK--------WIFDRMPVR 245
G + A +F+ VV S+ M G + +G+AK +FD M +
Sbjct: 203 GLFDRAIEVFKQF----VVLQGSMPDAGTMAGILPA--MGNAKPDDIRFVRRVFDNMQFK 256
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIF 301
+ +SWN M+ YA N + +A LF E+ V+ D T ++ + + I
Sbjct: 257 ELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIH 316
Query: 302 DAMPEKNTVS----WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
+ + KN NA++ Y + ARE+F+ M+ ++V SW ++I+ Y + G
Sbjct: 317 EIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGR 376
Query: 358 HARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRY 400
A +LF++M + D I++ A++A + +G D F M RY
Sbjct: 377 EAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRY 424
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 138/306 (45%), Gaps = 29/306 (9%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
+ R V+++A IS Y G+ + A +VFD MP RD+VSWN MI+G+ R A +F
Sbjct: 154 LDRNVYVAHSA-ISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVF 212
Query: 147 EM-------MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
+ MP ++ G A+ RR+FD M K ISWN +LA Y N
Sbjct: 213 KQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNE 272
Query: 200 RIEEACMLF----------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
+A LF +S V+ + F KR+ + + P + +
Sbjct: 273 FHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCP--NLLL 330
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----P 305
N ++ YA L +A+ +F+ +DV +WT+++S Y ++G EA +F+ M
Sbjct: 331 ENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGL 390
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHAR 360
E +++++ A++A + + F++MT + + M+ ++G I A
Sbjct: 391 EPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAY 450
Query: 361 NLFDRM 366
+ M
Sbjct: 451 DFITTM 456
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 134/317 (42%), Gaps = 35/317 (11%)
Query: 346 MITGYAQSGEITHARNLF-----DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
+I YA + A + D + + + +I S D+L LF M+
Sbjct: 56 LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115
Query: 401 GERLNRSPFTS--VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G +T L +C+ L LG Q+H + K+ + +V ++ + MY +CG E
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV-GIKPDDITMVGILSAC 517
+AY F+ + +DV+SWN MIAG+AR G A+ +F+ + G PD TM GIL A
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAM 235
Query: 518 SHTGL--------VEKGTEY--FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+ V ++ S N V N++ + V+L LM+
Sbjct: 236 GNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELF----------MLME 285
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSN----LYAASG 623
EPD+ T +L C + ++ E+I + +N +LL N +YA+ G
Sbjct: 286 KDEVEPDSITLATVLPPCGELSAFSVGKRIHEII---KRKNMCPNLLLENALMDMYASCG 342
Query: 624 RWGDVSKVRLKMRDRGV 640
D ++ M R V
Sbjct: 343 CLKDAREIFDLMSARDV 359
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/527 (42%), Positives = 313/527 (59%), Gaps = 13/527 (2%)
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMI 316
+ A LF++ P D+ + M GY + A +F + P+ T + +++
Sbjct: 71 MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYT--FPSLL 128
Query: 317 AGYVQTKRMDMAREL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
K ++ R+L + +NV T+I Y E+ AR +FD++ + +
Sbjct: 129 KACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVV 188
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
++ A+I GYA+ ++L LF E++ + SVLS+CA L +L+LGK +H +
Sbjct: 189 TYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYV 248
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
K GF V AL+ MY KCGS+++A FE + +D +W+ MI YA HG G A+
Sbjct: 249 KKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAV 308
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
LF+ M+ G +PD+IT +G+L ACSHTGLVE+G EYFY M YGVIP KHY CMVDL
Sbjct: 309 SLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDL 368
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAGRL+EA + +P P W LL AC +G EL ++ E IFE++ + G Y
Sbjct: 369 LGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDY 428
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
++LSNL A +GRW DV+ VR M +RGV K+ G S +EV N VH F GD +H +++
Sbjct: 429 IILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLH 488
Query: 673 AYLEELEFKLKQDGFVYSTKLVLH-DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
L+EL +LK G+V +T LV H D+ +EEKE LRYHSEKLA+ +G+L+ P G IRV
Sbjct: 489 QALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRV 548
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLRVC DCH+A K IS I R IILRD RFHHF G CSC DYW
Sbjct: 549 VKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 44/306 (14%)
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
T M A LF+ + ++ +NTM GYA++ A LF ++ + +G
Sbjct: 68 TTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQI----------LFSGL 117
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
Y+ F S+L CA+ +LE G+QLH +K+G
Sbjct: 118 FPDDYT---------------------FPSLLKACASCKALEEGRQLHCLAIKLGLSENV 156
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
+V L+ MY C ++ A F++I + V+++N MI GYAR +AL LF ++
Sbjct: 157 YVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQAR 216
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
+KP D+TM+ +LS+C+ G ++ G ++ + + G K T ++D+ + G LD+
Sbjct: 217 NLKPTDVTMLSVLSSCALLGALDLG-KWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDD 275
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
A + +NM D W A++ A ++G KA + EM EP+ L
Sbjct: 276 AVCVFENMAVR-DTQAWSAMIMAYAIHGH---GLKAVSLFKEMRKAGTEPDEI---TFLG 328
Query: 617 NLYAAS 622
LYA S
Sbjct: 329 LLYACS 334
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 184/451 (40%), Gaps = 88/451 (19%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLA 193
S+ A +LF+ +P+ D+V +NTM GYA+ A +F ++L ++ ++ LL
Sbjct: 70 SMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLK 129
Query: 194 AYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
A +EE C+ + + V +L+ + + A+ +FD++ V+
Sbjct: 130 ACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVT 189
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP 305
+N MITGYA+ + EA LF E +++ T +++S G +D + + + +
Sbjct: 190 YNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVK 249
Query: 306 EKNTVSW----NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
+ + A+I Y + +D A +FE M ++ +W+ MI Y
Sbjct: 250 KNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAY----------- 298
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
A G+ ++ LF EM++ G + F +L C+
Sbjct: 299 --------------------AIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACS---- 334
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
H LV+ GFE F G M K G + H + M+
Sbjct: 335 -------HTGLVEEGFEY--FYG-----MRDKYGVIPGIKH------------YGCMVDL 368
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYG 538
R G ++A +E + + I+P I +LSAC G VE G E + ++ +G
Sbjct: 369 LGRAGRLEEA---YEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHG 425
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
Y + +L RAGR ++ + K M
Sbjct: 426 -----GDYIILSNLCARAGRWEDVNYVRKLM 451
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 137/348 (39%), Gaps = 57/348 (16%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV----SWNVMISGYVR 135
A H+F+ +P+ V +N M GY A +F Q+ L ++ ++
Sbjct: 74 AHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACAS 133
Query: 136 NKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
K+L R L + K +V T+++ Y D ARR+FD++ E +++N +
Sbjct: 134 CKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAM 193
Query: 192 LAAYVQNGRIEEACMLF-ESKAN---------WEVVSWNSLMGG---------------- 225
+ Y + R EA LF E +A V+S +L+G
Sbjct: 194 ITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGF 253
Query: 226 -------------FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ K L DA +F+ M VRD +W+ MI YA + + +A LF+E
Sbjct: 254 NRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKE 313
Query: 273 ----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTK 323
D T+ ++ G V+E F M +K V + M+ +
Sbjct: 314 MRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAG 373
Query: 324 RMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDRMPQHD 370
R++ A E + + W T+++ G + + + +++ + D
Sbjct: 374 RLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELD 421
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG----SVEEAYHAFEE 466
S+L C +L L KQL +K + V + +C S++ A+H F++
Sbjct: 25 SLLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKF-INFCSLNPTTTSMQHAHHLFDQ 80
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I D++ +NTM GYAR A LF + G+ PDD T +L AC+ +E+G
Sbjct: 81 IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEG 140
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+ + + G+ N ++++ +D A+ + + +EP T+ A++
Sbjct: 141 RQ-LHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKI-WEPCVVTYNAMITG-- 196
Query: 587 LYGKTELAEKAAEVIFEMEPEN 608
Y + +A + E++ N
Sbjct: 197 -YARGSRPNEALSLFRELQARN 217
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 49/244 (20%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNV--------- 128
D A VF+ + V+YNAMI+GY + + A +F ++ R+L +V
Sbjct: 173 DCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSC 232
Query: 129 ------------------------------MISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+I Y + SL A +FE M RD +W+
Sbjct: 233 ALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWS 292
Query: 159 TMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES-KAN 213
M+ YA +G+ A +F M E +EI++ GLL A G +EE F +
Sbjct: 293 AMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDK 352
Query: 214 WEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRD-EVSWNTMITGYAQNNYLAEAQR 268
+ V+ G V + RL +A +P+R + W T+++ + + +R
Sbjct: 353 YGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKR 412
Query: 269 LFEE 272
+ E+
Sbjct: 413 VIEQ 416
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/576 (39%), Positives = 337/576 (58%), Gaps = 24/576 (4%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMITGYAQNNYLAEAQRLFEE------AP 274
L+ ++ + L A+ +FD+ P + + WN MI Y++ E+ LF +
Sbjct: 93 LIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPT 152
Query: 275 VKDVFTWTAMVS---------GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
D +T+T + + GY +N M+ E + N+++ Y RM
Sbjct: 153 SADKYTFTFVFTACSRHPTLRGYGENVH----GMVVKDGYESDIFVGNSLVNMYSIFSRM 208
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
A+ +F+ M ++V +W +++ GYA GE+ AR LFD MP + +SWA ++AGY
Sbjct: 209 VDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHR 268
Query: 386 YSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
+ ++L+ F +M + E + N + S+LS CA+L +L+ GK +H + K +
Sbjct: 269 FYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNIS 328
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
AL+ MY KCG ++ A F+ + +D+++W +MI+G + HG G + L F M G K
Sbjct: 329 TALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFK 388
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PDDIT++G+L+ CSH+GLVE+G F+ M +G++P +HY C++DLLGRAGRL+ A
Sbjct: 389 PDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFE 448
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP-ENAGMYVLLSNLYAASG 623
+K+MP EPD W ALL ACR++G +L E+ I E+ P + G YVLLSNLYA+ G
Sbjct: 449 AIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMG 508
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W V+KVR M RG + G SW+E+ VH F D LHP I L E+ ++
Sbjct: 509 QWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRIS 568
Query: 684 -QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCH 742
+ G+V STK VL D+ EE+KE + +HSEKLAVA+G+LS G IR+ KNLR CEDCH
Sbjct: 569 IEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEGT-IRITKNLRTCEDCH 627
Query: 743 NAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+A+K IS + R I++RD +RFH F G+CSC DYW
Sbjct: 628 SAMKTISLVFNREIVVRDRSRFHTFRYGNCSCTDYW 663
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 149/292 (51%), Gaps = 19/292 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N++++ Y + ++ A++VFD+MPQRD+++W ++ GY L AR LF+MMP R+ V
Sbjct: 196 NSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDV 255
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACML-FE 209
SW M++GY + + + A + F+ ML +E+ N +L+A G +++ +
Sbjct: 256 SWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVY 315
Query: 210 SKANWEVVSWN---SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
N ++S N +L+ + K R+ A+ +FD + RD ++W +MI+G + + AE
Sbjct: 316 IDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAEC 375
Query: 267 QRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMIF-DAMPEKNTVS----WNAMIA 317
F E + D T +++G +G V+E IF D +P V + +I
Sbjct: 376 LWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLID 435
Query: 318 GYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQ 368
+ R++ A E ++M + +V +W +++ G++ + + + +
Sbjct: 436 LLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAE 487
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 176/420 (41%), Gaps = 70/420 (16%)
Query: 98 MISGYLLNGQLDPARQVFDQMPQ-RDLVSWNVMISGYVRNKSLSAARNLFEMMPKR---- 152
+I Y+ L AR VFDQ P + WN+MI Y + S + LF M
Sbjct: 93 LIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPT 152
Query: 153 -----------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
S + L GY +N + + + E + N L+ Y R+
Sbjct: 153 SADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGY----ESDIFVGNSLVNMYSIFSRM 208
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNN 261
+A +F+ +V++W S++ G+ + L A+ +FD MP R++VSW M+ GY +
Sbjct: 209 VDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHR 268
Query: 262 YLAEAQRLFEEAPVKDVF-----TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN--- 313
+ EA + F + D +++S G +D+ + I + +KN + +
Sbjct: 269 FYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYI-DKNRILLSSNI 327
Query: 314 --AMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP---- 367
A+I Y + R+D AR +F+ + +++ +W +MI+G + G F M
Sbjct: 328 STALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGF 387
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ D I+ ++ G + SG E+ L +F +M P ++ +
Sbjct: 388 KPDDITLLGVLNGCSHSGLVEEGLSIFHDMI---------PLWGIVPKLEHY-------- 430
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
GC L+ + + G +E A+ A + + ++ DV++W +++ HG
Sbjct: 431 ------------GC-----LIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHG 473
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A VF+ MP+R +++ +++ GY + G+L AR++FD MP R+ VSW VM++GYV ++
Sbjct: 211 AKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFY 270
Query: 140 SAARNLFEMMPKRDVVSWN-----TMLSGYAQNGYADAARRIF-----DRMLEKNEISWN 189
+ A F M D V N ++LS A G D + I +R+L + IS
Sbjct: 271 NEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNIS-T 329
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR---- 245
L+ Y + GRI+ A +F+ ++++W S++ G + W F M
Sbjct: 330 ALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKP 389
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEE-----APVKDVFTWTAMVSGYVQNGKVDEARMI 300
D+++ ++ G + + + E +F + V + + ++ + G+++ A
Sbjct: 390 DDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEA 449
Query: 301 FDAMP-EKNTVSWNAMIAG 318
+MP E + V+W A+++
Sbjct: 450 IKSMPMEPDVVAWRALLSA 468
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 50/247 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ W + + G A +F+ MP R+ VS+ M++GY+ + + A Q F+ M
Sbjct: 222 DVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDML 281
Query: 119 ------------------------------------PQRDLVSWNV---MISGYVRNKSL 139
R L+S N+ +I Y + +
Sbjct: 282 CHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRI 341
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAY 195
AR +F+ + KRD+++W +M+SG + +G F ML + ++I+ G+L
Sbjct: 342 DCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGC 401
Query: 196 VQNGRIEEACMLFESKAN-WEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVS 249
+G +EE +F W +V + L+ + RL A MP+ D V+
Sbjct: 402 SHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVA 461
Query: 250 WNTMITG 256
W +++
Sbjct: 462 WRALLSA 468
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ S F +L +L + KQ+H Q+V G + L+ Y C ++ A F
Sbjct: 54 SHSTFVQLLKKRPSLTQI---KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVF 110
Query: 465 EEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVG--IKPDDITMVGILSACSHTG 521
++ I WN MI Y++ +++L LF M G D T + +ACS
Sbjct: 111 DQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHP 170
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
+ E + M G + +V++ R+ +A+ + MP + D TW ++
Sbjct: 171 TLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMP-QRDVITWTSV 229
Query: 582 LGACRLYGKTELAEKAAEVIFEMEP 606
+ + G+ A + +F+M P
Sbjct: 230 VKGYAMRGELVRARE----LFDMMP 250
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/702 (35%), Positives = 378/702 (53%), Gaps = 42/702 (5%)
Query: 88 PRRSSVSYNAMISGYLL-NGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
P R+ SY + L+ +G+L + + F + + S + L A +LF
Sbjct: 24 PLRADPSYLPQLHAALIKSGELTGSAKSFHSLLEAAAASPTL----------LPYAVSLF 73
Query: 147 EMMPKRDVVS--WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
+ P+ + + +N ++ + G+ + A +F ML A
Sbjct: 74 RLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHA------------------ASA 115
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
C + A + S + + V + G + R V D +++I YA +A
Sbjct: 116 CPADQHTAACALKSCSRMCALDVGR---GVQAYAVKRGLVADRFVLSSLIHMYASCGDVA 172
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE------KNTVSWNAMIAG 318
A+ +F+ A V W A+V+ Y++NG E +F M E + T+ G
Sbjct: 173 AARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACG 232
Query: 319 YVQTKRMD--MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
+ ++ +A + E +N ++ YA+ GEI AR LFD M D ++W+A
Sbjct: 233 RIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSA 292
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I+GY Q+ ++L LF EM+ N SVLS CA L +LE GK +H + +
Sbjct: 293 MISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKR 352
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
+G AL+ Y KCG +++A AFE + K+ +W +I G A +G G++AL LF
Sbjct: 353 LSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFS 412
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
SM+ GI+P D+T +G+L ACSH+ LVE+G +F SM RDYG+ P +HY CMVDLLGRA
Sbjct: 413 SMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRA 472
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
G +DEA ++ MP EP+A W ALL +C ++ + E+A + I + P ++G YVLLS
Sbjct: 473 GLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLS 532
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLE 676
N+YA++G+W D + VR +M+DRG++K G S +E+ V F D+ HPE IY +E
Sbjct: 533 NIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVE 592
Query: 677 ELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLR 736
E+ ++K G+V +T V +V E EKE + +HSEKLA+A+G++ + G IR+ KNLR
Sbjct: 593 EMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLR 652
Query: 737 VCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
VC DCH+A K ISK+ R I++RD N FHHF G+CSC DYW
Sbjct: 653 VCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 35/360 (9%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-------PQR 121
HM C D +A VF++ V +NA+++ YL NG ++F M +
Sbjct: 163 HMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEV 222
Query: 122 DLVSWNVMISGYVRNKSLS--AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
LVS V G + + L A ++ E R+ ++ YA+ G ARR+FD
Sbjct: 223 TLVSV-VTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDG 281
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDA 235
M ++ ++W+ +++ Y Q + EA LF ++ V+ S++ L
Sbjct: 282 MQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETG 341
Query: 236 KWIFDRMPVRDEVSWNT-----MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
KW+ + R +S T ++ YA+ + +A FE PVK+ +TWTA++ G
Sbjct: 342 KWVHSYVR-RKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMAT 400
Query: 291 NGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVA 341
NG+ EA +F +M E V++ ++ + ++ R F++M V
Sbjct: 401 NGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVE 460
Query: 342 SWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYA---QSGYSEDSLRLFIEM 397
+ M+ ++G + A MP + + + W A+++ A G E++L+ I +
Sbjct: 461 HYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISL 520
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 147/356 (41%), Gaps = 60/356 (16%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
HV R+ A++ Y G++ AR++FD M RD+V+W+ MISGY +
Sbjct: 246 HVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCRE 305
Query: 142 ARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFD----RMLEKNEISWNGLLA 193
A LF M V V+ ++LS A G + + + + L I L+
Sbjct: 306 ALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVD 365
Query: 194 AYVQNGRIEEACMLFES---KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM------PV 244
Y + G I++A FES K +W +W +L+ G R +A +F M P
Sbjct: 366 FYAKCGCIDDAVEAFESMPVKNSW---TWTALIKGMATNGRGREALELFSSMREAGIEPT 422
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD------VFTWTAMVSGYVQNGKVDEAR 298
+V++ ++ + + + E +R F+ +D V + MV + G VDEA
Sbjct: 423 --DVTFIGVLMACSHSCLVEEGRRHFDSM-ARDYGIKPRVEHYGCMVDLLGRAGLVDEAY 479
Query: 299 MIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
MP E N V W A+++ + + + E K + S N + SG+
Sbjct: 480 QFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEAL-----KQIISLNP-----SHSGDYV 529
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
N+ YA +G +D+ + EMK G + ++P S++
Sbjct: 530 LLSNI------------------YASAGQWKDAAMVRKEMKDRG--IEKTPGCSLI 565
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/660 (36%), Positives = 367/660 (55%), Gaps = 23/660 (3%)
Query: 142 ARNLFEMM-PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
A NLF + P + + +N++L +++G A + R+ + IS+ +L A
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125
Query: 197 QNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
+ + E L F+ + LM + R+ A+ +FD M RD V+WNT
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185
Query: 253 MITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
MI Y + L EA +LFEE + D +VS + G + R I+D + E +
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245
Query: 309 ----TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
T A++ Y MDMA E F M+ +N+ M++GY+++G + AR +FD
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+ D + W +I+ YA+S + +++LR+F EM G + + SV+S C NL +L+
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
K +H G E+ + NAL+ MY KCG ++ A FE++ ++V+SW++MI +A
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM 425
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HG D+L LF MK ++P+++T VG+L CSH+GLVE+G + F SM +Y + P +
Sbjct: 426 HGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIE 485
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CMVDL GRA L EA ++++MP P+ WG+L+ ACR++G+ EL E AA+ I ++
Sbjct: 486 HYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKL 545
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
EP++ G VL+SN+YA RW V +R M + V K G S +++ K H F +GD
Sbjct: 546 EPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKR 605
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
H + + IY L E+ KLK G+V VL DV EEEK+ ++ +HSEKLA+ +G+++
Sbjct: 606 HKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKE 665
Query: 725 AGRP------IRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IR++KNLRVCEDCH K +SK+ II+RD RFH + G CSC DYW
Sbjct: 666 KEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 168/324 (51%), Gaps = 24/324 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ Y G+++ AR VFD+M QRD+V+WN MI Y R L A LFE M +V+
Sbjct: 153 TGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVM 212
Query: 156 SWNTML----SGYAQNGYADAARRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACM 206
+L S + G R I+D ++E N++ + L+ Y G ++ A
Sbjct: 213 PDEMILCNIVSACGRTGNMRYNRAIYDFLIE-NDVRMDTHLLTALVTMYAGAGCMDMAME 271
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
F + + +++ G+ K RL DA+ IFD+ ++D V W TMI+ YA++++ EA
Sbjct: 272 FFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEA 331
Query: 267 QRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMI-----FDAMPEKNTVSWNAMIA 317
R+FEE DV T +++S V G +D+A+ + + + + NA+I
Sbjct: 332 LRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPID-NALIN 390
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----IS 373
Y + +D AR++FE M +NV SW++MI +A GE + + +LF +M Q + ++
Sbjct: 391 MYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVT 450
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEM 397
+ ++ G + SG E+ ++F M
Sbjct: 451 FVGVLYGCSHSGLVEEGKKIFASM 474
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 171/383 (44%), Gaps = 61/383 (15%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF------NSMP-------------R 89
+RN D+ WN I + R G D A +F N MP R
Sbjct: 168 ARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 227
Query: 90 RSSVSYNAMISGYLLN--------------------GQLDPARQVFDQMPQRDLVSWNVM 129
++ YN I +L+ G +D A + F +M R+L M
Sbjct: 228 TGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAM 287
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNE 185
+SGY + L AR +F+ +D+V W TM+S YA++ + A R+F+ M ++ +
Sbjct: 288 VSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDV 347
Query: 186 ISWNGLLAAYVQNGRIEEA--CMLFESKANWEVVSW--NSLMGGFVKQKRLGDAKWIFDR 241
++ +++A V G +++A + E V N+L+ + K L A+ +F++
Sbjct: 348 VTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEK 407
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEA 297
MP R+ VSW++MI +A + +++ LF + ++V T+ ++ G +G V+E
Sbjct: 408 MPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEG 467
Query: 298 RMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYA 351
+ IF +M ++ ++ + M+ + + + A E+ E+M NV W ++++
Sbjct: 468 KKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACR 527
Query: 352 QSGEI----THARNLFDRMPQHD 370
GE+ A+ + P HD
Sbjct: 528 VHGELELGELAAKRILKLEPDHD 550
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 164/371 (44%), Gaps = 67/371 (18%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS-------------- 125
A +VF+ M +R V++N MI Y G LD A ++F++M +++
Sbjct: 168 ARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 227
Query: 126 ----------WNVMISGYVRNKS---------------LSAARNLFEMMPKRDVVSWNTM 160
++ +I VR + + A F M R++ M
Sbjct: 228 TGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAM 287
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEV 216
+SGY++ G D AR IFD+ K+ + W +++AY ++ +EA +FE S +V
Sbjct: 288 VSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDV 347
Query: 217 VSWNSLMGGFVKQKRLGDAKWIF---------DRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
V+ S++ V L AKW+ +P+ N +I YA+ L A+
Sbjct: 348 VTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPID-----NALINMYAKCGGLDAAR 402
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTK 323
+FE+ P ++V +W++M++ + +G+ ++ +F M E N V++ ++ G +
Sbjct: 403 DVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSG 462
Query: 324 RMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMPQH-DCISWAAI 377
++ +++F +MT + + M+ + ++ + A + + MP + + W ++
Sbjct: 463 LVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSL 522
Query: 378 IAGYAQSGYSE 388
++ G E
Sbjct: 523 MSACRVHGELE 533
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/567 (38%), Positives = 340/567 (59%), Gaps = 8/567 (1%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK--- 276
++L+ + R+ DA+++FD+M RD V+WN MI GY+QN + +L+EE
Sbjct: 155 SALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTE 214
Query: 277 -DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMAREL 331
D ++S G + + I + + + +++ Y M +ARE+
Sbjct: 215 PDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREV 274
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
++ + K++ M++GYA+ G + AR +FDRM + D + W+A+I+GYA+S ++L
Sbjct: 275 YDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEAL 334
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+LF EM+R ++ SV+S CAN+ +L K +H K GF + NAL+ MY
Sbjct: 335 QLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMY 394
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG++ +A FE + K+VISW++MI +A HG A+ LF MK I+P+ +T +
Sbjct: 395 AKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFI 454
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+L ACSH GLVE+G ++F SM ++ + P +HY CMVDL RA L +A L++ MPF
Sbjct: 455 GVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPF 514
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
P+ WG+L+ AC+ +G+ EL E AA + E+EP++ G V+LSN+YA RW DV V
Sbjct: 515 PPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLV 574
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R M+ +GV K S +EV N+VH F + D H + D IY L+ + +LK G+ ST
Sbjct: 575 RKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPST 634
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
+L D+ EEEK+ ++ +HSEKLA+ YG++ IR++KNLR+CEDCH+ +K +SK+
Sbjct: 635 SGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKV 694
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
I++RD RFHHF+GG CSC DYW
Sbjct: 695 HRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 200/444 (45%), Gaps = 63/444 (14%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
+A+I+ Y G++ AR +FD+M RD+V+WN+MI GY +N L+E M +
Sbjct: 155 SALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTE 214
Query: 152 RDVVSWNTMLSGYAQNG---YADAARR-IFDRMLEKNEISWNGLLAAYVQNGRIEEACML 207
D + T+LS A G Y A + I D L+ Y G + A +
Sbjct: 215 PDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREV 274
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
++ + +V +++ G+ K + DA++IFDRM +D V W+ MI+GYA++ EA
Sbjct: 275 YDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEAL 334
Query: 268 RLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW-----NAMIAG 318
+LF E V D T +++S G + +A+ I +KN NA+I
Sbjct: 335 QLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWI-HTYADKNGFGRTLPINNALIDM 393
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Y + + ARE+FE M KNV SW++MI +A G+ A LF RM + +
Sbjct: 394 YAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQN-------- 445
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV---KV 435
IE N F VL C++ +E G++ ++ ++
Sbjct: 446 ----------------IEP-------NGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRI 482
Query: 436 GFEA---GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDA 491
+ GC V +YC+ + +A E + +VI W ++++ H G+
Sbjct: 483 SPQREHYGCMVD-----LYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNH--GEIE 535
Query: 492 LMLFESMKTVGIKPDDITMVGILS 515
L F + + + ++PD + +LS
Sbjct: 536 LGEFAATRLLELEPDHDGALVVLS 559
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 123/233 (52%), Gaps = 2/233 (0%)
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ +A +LF +P ++ +++ E++L L++ ++R G L+R F +L
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 416 CANLASLELGKQLHGQLVKVGF-EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
+ L++L LG ++HG K GF A F+ +AL+ MY CG + +A F+++ +DV++
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
WN MI GY+++ L L+E MKT G +PD I + +LSAC+H G + G + +
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYG-KAIHQFI 243
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+D G S T +V++ G + A+ + +P + + L G +L
Sbjct: 244 KDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKL 296
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 39/249 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D+ W+ I+ + + AL +FN M RR ++ ++IS G L A+ +
Sbjct: 313 DLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIH 372
Query: 116 DQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ R L N +I Y + +L AR +FE MP+++V+SW++M++ +A +G AD
Sbjct: 373 TYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDAD 432
Query: 172 AARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFV 227
+A +F RM +E N +++ G+L A G +EE F S N +S
Sbjct: 433 SAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRIS--------- 483
Query: 228 KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-KDVFTWTAMVS 286
P R+ + M+ Y + N+L +A L E P +V W +++S
Sbjct: 484 ---------------PQREH--YGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMS 526
Query: 287 GYVQNGKVD 295
+G+++
Sbjct: 527 ACQNHGEIE 535
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/676 (34%), Positives = 370/676 (54%), Gaps = 71/676 (10%)
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-- 187
+S +V + + F+ + RDV +WN M+SGY + G + R F + + ++
Sbjct: 26 VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 85
Query: 188 ---WNGLLAA---YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ +L A + +I C+ + W+V SL+ + + K +G+A+ +FD
Sbjct: 86 YRTFPSVLKACRTVIDGNKIH--CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 143
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVD------ 295
MPVRD SWN MI+GY Q+ EA L D T +++S + G +
Sbjct: 144 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 203
Query: 296 --------------EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------ 335
+ + +FD M ++ +SWN++I Y ++ A LF+ M
Sbjct: 204 SYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 263
Query: 336 --------------------TCKNVASW--------------NTMITGYAQSGEITHARN 361
C++V + N ++ YA+ G + AR
Sbjct: 264 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 323
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLA 420
+F+ +P D ISW II+GYAQ+G++ +++ ++ M+ GE N+ + SVL C+
Sbjct: 324 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 383
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIA 480
+L G +LHG+L+K G FV +L MY KCG +E+A F +I + + WNT+IA
Sbjct: 384 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 443
Query: 481 GYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVI 540
+ HG G+ A+MLF+ M G+KPD IT V +LSACSH+GLV++G F M DYG+
Sbjct: 444 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 503
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
P+ KHY CMVD+ GRAG+L+ A +K+M +PDA+ WGALL ACR++G +L + A+E
Sbjct: 504 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH 563
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+FE+EPE+ G +VLLSN+YA++G+W V ++R +G++K G+S +EV NKV F
Sbjct: 564 LFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYT 623
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
G+ HP + +Y L L+ KLK G+V + VL DV ++EKEH+L HSE+LA+A+ +
Sbjct: 624 GNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFAL 683
Query: 721 LSIPAGRPIRVMKNLR 736
++ PA IR+ KNLR
Sbjct: 684 IATPAKTTIRIFKNLR 699
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 190/459 (41%), Gaps = 117/459 (25%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
AR +FD+MP RD+ SWN MISGY ++ + A L + D V+ ++LS + G
Sbjct: 137 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDF 196
Query: 171 DAA--------------------RRIFDRMLEKNEISWNGLLAAYVQN------------ 198
+ +++FDRM ++ ISWN ++ AY N
Sbjct: 197 NRGVTIHSYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 256
Query: 199 ---GRIEEACML----------------------FESKANW---EVVSWNSLMGGFVKQK 230
RI+ C+ F + W ++ N+++ + K
Sbjct: 257 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 316
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA------------------------ 266
+ A+ +F+ +P D +SWNT+I+GYAQN + +EA
Sbjct: 317 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 376
Query: 267 ----------------QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
RL + DVF T++ Y + G++++A +F +P N+V
Sbjct: 377 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 436
Query: 311 SWNAMIAGYVQTKRMDMARELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRM 366
WN +IA + + A LF+ M + V ++ T+++ + SG + + F+ M
Sbjct: 437 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 496
Query: 367 PQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
I+ + ++ Y ++G E +L+ +K + + S + ++LS C +
Sbjct: 497 QTDYGITPSLKHYGCMVDMYGRAGQLETALKF---IKSMSLQPDASIWGALLSACRVHGN 553
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLV--MYCKCGSVE 458
++LGK L +V E VG +L+ MY G E
Sbjct: 554 VDLGKIASEHLFEVEPE---HVGYHVLLSNMYASAGKWE 589
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 160/361 (44%), Gaps = 65/361 (18%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA++ Y G +D AR VF+ +P D++SWN +ISGY
Sbjct: 306 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY---------------------- 343
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEI-----SWNGLLAAYVQNGRIEEACM---- 206
AQNG+A A +++ M E+ EI +W +L A Q G + +
Sbjct: 344 ---------AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 394
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
L ++ +V SL + K RL DA +F ++P + V WNT+I + + + +A
Sbjct: 395 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 454
Query: 267 QRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIA 317
LF +E D T+ ++S +G VDE + F+ M ++ + M+
Sbjct: 455 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 514
Query: 318 GYVQTKRMDMARELFEAMTCKNVAS-WNTMIT-----GYAQSGEITHARNLFDRMPQHDC 371
Y + +++ A + ++M+ + AS W +++ G G+I + +LF+ P+H
Sbjct: 515 MYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA-SEHLFEVEPEH-- 571
Query: 372 ISWAAIIAG-YAQSGYSE--DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ + +++ YA +G E D +R +G+ L ++P S + + G Q
Sbjct: 572 VGYHVLLSNMYASAGKWEGVDEIRSI----AHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 627
Query: 429 H 429
H
Sbjct: 628 H 628
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 25/312 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI N + + + G DSA VFN +P +S+N +ISGY NG A ++++ M
Sbjct: 301 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 360
Query: 120 QRDLV-----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYA 170
+ + +W ++ + +L L + K DV ++ Y + G
Sbjct: 361 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 420
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGF 226
+ A +F ++ N + WN L+A + +G E+A MLF+ + V +++ +L+
Sbjct: 421 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 480
Query: 227 VKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFT 280
+ + +W F+ M ++ + M+ Y + L A + + ++ D
Sbjct: 481 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 540
Query: 281 WTAMVSGYVQNGKVDEARM----IFDAMPEK--NTVSWNAMIAGYVQTKRMDMARELFEA 334
W A++S +G VD ++ +F+ PE V + M A + + +D R +
Sbjct: 541 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 600
Query: 335 MTCKNVASWNTM 346
+ W++M
Sbjct: 601 KGLRKTPGWSSM 612
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/472 (41%), Positives = 301/472 (63%), Gaps = 1/472 (0%)
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
N +++ ++ +M + + K+ + ++ Y + G + A +F R+
Sbjct: 9 NDFTYSTILTAQPGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIE 68
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN-LASLELGK 426
+ D ++W+A+I GYAQ G +E ++R+F++M + + N F+ +++ CA A +E GK
Sbjct: 69 EKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGK 128
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
QLH +K F V +ALL MY K G +E A+ F+ ++D++SWN++I+GYA+HG
Sbjct: 129 QLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHG 188
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+G+ AL +FE M+ ++ D +T +G++SAC+HTGL +G YF M +D+ + P +HY
Sbjct: 189 YGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHY 248
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
+CMVDL GRAG L +A ++ MPF A W LL A ++ E+ + AA+ + ++P
Sbjct: 249 SCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQP 308
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+N YVLL+N+YA+ G W + +KVR M ++ VKKV GYSW+EV+NK +TF GD HP
Sbjct: 309 QNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHP 368
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
++IYA LEEL +LK G+ T V DV EE KE +L HSE+LA+A+G++ P G
Sbjct: 369 LSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPG 428
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P++++KNLRVC DCH+ IK IS + GR I++RD+NRFHHF GG CSCGDYW
Sbjct: 429 TPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 122/240 (50%), Gaps = 19/240 (7%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKN 184
++ YV+ ++ A +F+ + ++D+V+W+ M+ GYAQ G + A RIF +M ++ N
Sbjct: 47 LLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPN 106
Query: 185 EISWNGLL-AAYVQNGRIEEACML----FESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
E +++G++ A +E+ L +S+ N + ++L+ + K+ + A +F
Sbjct: 107 EYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVF 166
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVD 295
R RD VSWN++I+GYAQ+ Y +A +FEE + D T+ ++S G +
Sbjct: 167 KRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLAN 226
Query: 296 EARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITG 349
E + FD M + + + ++ M+ Y + + A E+ M A+ W T++
Sbjct: 227 EGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAA 286
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
++ +++T++T + + + VK TA++ YV+ G VDEA +F +
Sbjct: 9 NDFTYSTILTAQPGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIE 68
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TC----------K 338
EK+ V+W+AMI GY Q + A +F M C K
Sbjct: 69 EKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGK 128
Query: 339 NVASW-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ +W + ++T Y++ G+I A +F R + D +SW +II+GYAQ G
Sbjct: 129 QLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHG 188
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
Y +L +F EM+R ++ F V+S C + G++ +VK
Sbjct: 189 YGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVK 237
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 24/282 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
A++ Y+ G +D A +VF ++ ++D+V+W+ MI GY + A +F M K +
Sbjct: 45 TALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIK 104
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEIS---------WNGLLAAYVQNGRIEEACM 206
SG A A + L I + LL Y + G IE A
Sbjct: 105 PNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFE 164
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNY 262
+F+ + ++VSWNS++ G+ + A +F+ M + D V++ +I+
Sbjct: 165 VFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGL 224
Query: 263 LAEAQRLFEEAPVKD------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAM 315
E QR F + VKD + ++ MV Y + G + +A I + MP + + W +
Sbjct: 225 ANEGQRYF-DIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTL 283
Query: 316 IAGYVQTKRMD---MARELFEAMTCKNVASWNTMITGYAQSG 354
+A + ++ +A + ++ +N AS+ + YA G
Sbjct: 284 LAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVG 325
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 44/186 (23%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ------- 120
+ +++ G D A VF + + V+++AMI GY G + A ++F QM +
Sbjct: 48 LDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNE 107
Query: 121 --------------------RDLVSWNV-------------MISGYVRNKSLSAARNLFE 147
+ L +W++ +++ Y + + +A +F+
Sbjct: 108 YTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFK 167
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEE 203
+RD+VSWN+++SGYAQ+GY A +F+ M LE + +++ G+++A G E
Sbjct: 168 RQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANE 227
Query: 204 ACMLFE 209
F+
Sbjct: 228 GQRYFD 233
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/745 (32%), Positives = 404/745 (54%), Gaps = 34/745 (4%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM------ 118
N+ I ++R GC D AL VF+ M ++ V++ ++IS + G A +F +M
Sbjct: 54 NIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVS 113
Query: 119 PQRDLVSWNVMISGYVRNKSLSAAR----NLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
P R + ++++ R ++L + ++ + + D + N ++ Y + G + A
Sbjct: 114 PDR-ITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAG 172
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV-----SWNSLMG----- 224
+FD + + N SW ++AAY QNG E L S+ N V ++ +++G
Sbjct: 173 NVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLL-SRMNQAGVKPDGYTFTTVLGACTAV 231
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G +++ ++ A I RD +I Y + L EA +F + KD+ +W++M
Sbjct: 232 GALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSM 291
Query: 285 VSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAREL----FEAMT 336
++ + Q+G+ A + M N V++ ++ K +E+ +A
Sbjct: 292 IAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGY 351
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+V + ++ Y G + AR++F+ + D +SW+++IAGY+Q+ +L LF E
Sbjct: 352 SDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFRE 411
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ G + N F S + CA + +L G QLH ++ +G + V AL+ +Y KCG
Sbjct: 412 MEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGR 471
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
+EEA F + K++++W ++ Y ++G G +L L M+ G+KPD I V IL +
Sbjct: 472 LEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVS 531
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
C++ G + KG Y+ M +D+G+ P +H CMVD+LGRAG+L+ A+ L+ M FE A
Sbjct: 532 CNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA 591
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
W LL AC+ + T A +AAE IF++EP+NA YVLLS+++ A+G W + R +M
Sbjct: 592 -WMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMD 650
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEK--DRIYAYLEELEFKLKQDGFVY-STKL 693
RGV+++ G S +E+ ++VH F + P I+A LE+L +++ G+V +T +
Sbjct: 651 GRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAV 710
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
L DV E KE+ + YHSE LA+ GI+S PAG P+R+ KNLR+C DCH A K +SK+V
Sbjct: 711 RLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVH 770
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R I +RD R HHF G CSCGDYW
Sbjct: 771 RRISVRDGRRHHHFENGVCSCGDYW 795
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 160/381 (41%), Gaps = 59/381 (15%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPAR- 112
D ++ W + I + +NG C L + + M + ++ ++ G L+ A+
Sbjct: 180 DPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKI 239
Query: 113 ----QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
+ RD +I+ Y + +L A +F + +D+VSW++M++ +AQ+G
Sbjct: 240 LHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSG 299
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAY----------------VQNGRIEEACM-- 206
A +A ++ M + N +++ +L A VQ G ++ C+
Sbjct: 300 QAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTS 359
Query: 207 -LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
L + NW G+V+ A+ IF+ RD VSW++MI GY+QN A
Sbjct: 360 ALVKMYCNW----------GWVET-----ARSIFESSRERDVVSWSSMIAGYSQNESPAR 404
Query: 266 AQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIA 317
A LF E V V T+ + + G + + + + +K+ A++
Sbjct: 405 ALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVN 464
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP----QHDCIS 373
Y + R++ A +F M KN+ +W ++ Y Q+G + + L M + D I
Sbjct: 465 LYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIV 524
Query: 374 WAAIIAGYAQSGYSEDSLRLF 394
+ AI+ +G L +
Sbjct: 525 FVAILVSCNYAGQMSKGLHYY 545
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG-----CFVGNALLVMYCKCGSVEEAY 461
S ++L+ C++L +L GK++HG +++ + N ++ MY +CG + A
Sbjct: 11 SACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLAL 70
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS--- 518
F+ + D++V++W ++I+ + G DA++LF M G+ PD IT IL S
Sbjct: 71 DVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRE 130
Query: 519 ---------HTGLVEKGTE-------YFYSMNRDYGVI------------PNSKHYTCMV 550
H+ +++ G E M G + PN +T ++
Sbjct: 131 RNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIII 190
Query: 551 DLLGRAGRLDEAQNLMKNM---PFEPDAATWGALLGACRLYGKTELAE--KAAEVIFEME 605
+ G E L+ M +PD T+ +LGAC G E A+ AA +
Sbjct: 191 AAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGL 250
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
+A + L NLY G + V +++ ++ +
Sbjct: 251 DRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDI 285
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/619 (36%), Positives = 348/619 (56%), Gaps = 57/619 (9%)
Query: 213 NWEVVSWNSLMGGFVKQKRL-------GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
N + + WN +G +K R+ G A+ IFD + ++ V +N MI Y N+ +
Sbjct: 46 NDQYLRWNPSVG--IKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKD 103
Query: 266 A----QRLFEEAPVKDVFTWTAMVSG--------------------------YVQNGKV- 294
A + ++ + V D++T+ ++ YV NG +
Sbjct: 104 ALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIA 163
Query: 295 --------DEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV------ 340
EA+ + D +P ++ VSWN+M++ Y Q R + A EL M N+
Sbjct: 164 MYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCT 223
Query: 341 -ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
AS +T S + + + +F ++ + ISW +IA Y + ++++ L+ +M+
Sbjct: 224 MASLLPAVTN-TTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEA 282
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G + SVL +L++L LG+++H + + NAL+ MY KCG + +
Sbjct: 283 NGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRD 342
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A F ++ +DV+SW ++I+ Y + G G+DA+ +F M+ G+ PD I V +L+ACSH
Sbjct: 343 ARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSH 402
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
GL++ G Y++++ + G+ P +H+ C+VDLLGRAG++DEA ++ MP EPD WG
Sbjct: 403 AGLLDDG-RYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWG 461
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
LL ACR+Y + AA+ + + PE++G YVLLSN+YA +GRW DV+ +R M +G
Sbjct: 462 PLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKG 521
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
+KK+ G S +E+ + VHTF GD HP+ +IY L+ L K+K+ G++ T LHDV
Sbjct: 522 IKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVE 581
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
EE+KE+ L HSEKLAVA+ I++ G PIRV KNLRVC DCH A K ISKI R II+R
Sbjct: 582 EEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIR 641
Query: 760 DNNRFHHFSGGSCSCGDYW 778
D +RFHHF G CSCGDYW
Sbjct: 642 DTHRFHHFQEGCCSCGDYW 660
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 185/404 (45%), Gaps = 25/404 (6%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSW 157
Y G+ AR +FD++ +++V +NVMI YV N A +++ M + D+ ++
Sbjct: 64 YAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTY 123
Query: 158 NTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
+L +++ +I + L+ N NGL+A Y + ++EA + +
Sbjct: 124 PCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPC 183
Query: 214 WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-------EVSWNTMITGYAQNNYLAEA 266
+VVSWNS++ + + R DA + M + S +T +N L
Sbjct: 184 RDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLY-V 242
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQT 322
+ +F + K V +W M++ YV N EA +++ M E + VS +++ Y
Sbjct: 243 KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDL 302
Query: 323 KRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+ + R + + K N+ N +I YA+ G + AR +F++M D +SW +II
Sbjct: 303 SALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSII 362
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
+ Y + G D++ +F EM+ G + F SVL+ C++ L+ G+ + + G
Sbjct: 363 SAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGIT 422
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
++ + + G ++EAY ++ ++ D W +++
Sbjct: 423 PKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 185/444 (41%), Gaps = 106/444 (23%)
Query: 35 YPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRN---GCCDSAL--HVFNSMPR 89
YP TLK+ L+ K N D +R WN ++ + C + L H+F+ +
Sbjct: 31 YPDINTLKK-LHGKVLN------DQYLR-WNPSVGIKLMRVYAACGEPGLARHIFDEITD 82
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS------------------W----- 126
++ V +N MI Y+ N A V+ M + V W
Sbjct: 83 KNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQI 142
Query: 127 ----------------NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG-Y 169
N +I+ Y + KSL A+ + + +P RDVVSWN+M+S YAQNG +
Sbjct: 143 HGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRF 202
Query: 170 ADA------------------------------------ARRIFDRMLEKNEISWNGLLA 193
DA + +F ++ +K+ ISWN ++A
Sbjct: 203 NDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVMIA 262
Query: 194 AYVQNGRIEEACMLF-ESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFD----RMPVR 245
YV N +EA +L+ + +AN +VVS S++ + L + + + +
Sbjct: 263 MYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLP 322
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ + N +I YA+ L +A+ +F + +DV +WT+++S Y + G+ +A +F M
Sbjct: 323 NLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMR 382
Query: 306 EK----NTVSWNAMIAGYVQTKRMDMARELFEAMT----CKNVASWNTMITGYAQSGEIT 357
+++++ +++A +D R F M + + ++ ++G+I
Sbjct: 383 NSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKID 442
Query: 358 HARNLFDRMP-QHDCISWAAIIAG 380
A +MP + D W +++
Sbjct: 443 EAYGFIRQMPLEPDERVWGPLLSA 466
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/488 (42%), Positives = 308/488 (63%), Gaps = 6/488 (1%)
Query: 297 ARMIFDAMPEKN--TVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVASWNTMITGY 350
A+ IF + ++ T WN+ + + A LF + C + + ++++
Sbjct: 112 AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 171
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
++++ R L + + SW ++IAGY Q G +++++ LF +M+ G + N
Sbjct: 172 LNLLDLSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVV 231
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+VL+ CA+L +L+LG ++H + GF+ + N L+ MY KCG +EEA FEE+ ++
Sbjct: 232 AVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEER 291
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
V+SW+ MI G A HG ++AL LF M VGI+P+ +T +G+L ACSH GL+ +G +F
Sbjct: 292 TVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFF 351
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
SM RDYG+IP +HY CMVDLL RAG L EA + NMP +P+ WGALLGACR++
Sbjct: 352 ASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKN 411
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
E+AE+A + + E++P N G YV+LSN+YA +GRW D ++VR M+DR VKK G+S +
Sbjct: 412 VEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSIT 471
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
V VH F G+ HP+ ++I+ EEL +++ G+V +T +VL D+ E EK + H
Sbjct: 472 VDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRH 531
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SEKLA+ +G+++ PA PIR+MKNLR+CEDCH+A K IS IV R I++RD NRFH F+
Sbjct: 532 SEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDN 591
Query: 771 SCSCGDYW 778
SCSC DYW
Sbjct: 592 SCSCRDYW 599
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 26/279 (9%)
Query: 62 RQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
R W I +++ G A+H+F M + + V+ A+++ G LD ++ +
Sbjct: 193 RSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEY 252
Query: 118 MP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
+R++ N +I YV+ L A +FE M +R VVSW+ M+ G A +G A+ A
Sbjct: 253 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 312
Query: 174 RRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKAN-----WEVVSWNSLMG 224
R+F M +E N +++ GLL A G I E F S ++ + ++
Sbjct: 313 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 372
Query: 225 GFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG--YAQNNYLAEA--QRLFEEAPVKDVF 279
+ L +A MP++ + V W ++ +N +AE + L E P+ D +
Sbjct: 373 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 432
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPE---KNTVSWNAM 315
+ + + Y + G+ ++ + M + K T W+++
Sbjct: 433 -YVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSI 470
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 28/252 (11%)
Query: 138 SLSAARNLFEMMPKR--DVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGL 191
S A+ +F+ + K+ + WN+ L A+ A +F R+ + + + + +
Sbjct: 108 SFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSV 167
Query: 192 LAAYV-----QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
L A + NGRI + K + SW S++ G+V+ + +A +F +M
Sbjct: 168 LRACLNLLDLSNGRILHGVV---EKVGFR--SWTSMIAGYVQCGKAKEAIHLFAKMEEAG 222
Query: 246 ---DEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEAR 298
+EV+ ++ A L R+ E ++V ++ YV+ G ++EA
Sbjct: 223 VKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEAC 282
Query: 299 MIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSG 354
+F+ M E+ VSW+AMI G R + A LF M+ N ++ ++ + G
Sbjct: 283 KVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMG 342
Query: 355 EITHARNLFDRM 366
I+ R F M
Sbjct: 343 LISEGRRFFASM 354
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++R N I +++ GC + A VF M R+ VS++AMI G ++G+ + A ++F M
Sbjct: 261 NVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMS 320
Query: 120 QRDLVSWNVMISGYVRNKS----LSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYA 170
Q + V G + S +S R F M + + + M+ ++ G
Sbjct: 321 QVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLL 380
Query: 171 DAARR-IFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
A I + ++ N + W LL A + +E A
Sbjct: 381 HEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 415
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/507 (41%), Positives = 311/507 (61%), Gaps = 5/507 (0%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEK-----NTVSWNAMIAGYVQTKRMDMAREL 331
D F ++V YV+ K+ A +FD PE+ + + WN +I G + M A +L
Sbjct: 213 DSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKL 272
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
F+AM K SW+T+I G+A++G++ A LFD+MP+ + +SW ++ G++++G SE +L
Sbjct: 273 FKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKAL 332
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+F +M G R N S LS CA + LE G ++H + G +G AL+ MY
Sbjct: 333 SMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMY 392
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCG++E A F E K + +W MI G+A HG + A+ F+ M GIKPD++ +
Sbjct: 393 AKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFL 452
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
+L+AC H+G V+ G +F SM DY + P+ KHYT +VD+LGR+G+L EA ++ MP
Sbjct: 453 ALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPM 512
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
PD WGAL ACR + KT++A+ A + ++EP + G Y+ LSN YAA G+W D +V
Sbjct: 513 NPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERV 572
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R+ M++RGV K +G+S +EV+ +VH F GD H + I LEE+ + G++ T
Sbjct: 573 RVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGT 632
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
+ VLH++ +EEKE +L H EKLA+A+ ++ G IR++KNL+VC DCH+ +K+ SKI
Sbjct: 633 EWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKI 692
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
R I+LRD RFHHF GSCSC D+W
Sbjct: 693 SQREIMLRDMKRFHHFKDGSCSCRDHW 719
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/516 (21%), Positives = 214/516 (41%), Gaps = 61/516 (11%)
Query: 46 NSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN 105
+S S N P P+ + ++ T+ + SAL + + P + + ++I G
Sbjct: 37 SSSSSNAPIPSPNPPEITTTISKTSENKPKSSLSALFIPPTTP--TEAHFISLIHGSKTI 94
Query: 106 GQLDP--ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
QL A+ + + L++ ++ S +R KS++ + +F +++ ++N ++ G
Sbjct: 95 LQLHQIHAQIIIHNLSSSSLITTQLISSSSLR-KSINHSLAVFNHHKPKNLFTFNALIRG 153
Query: 164 YAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
N + A F ML + + +++ +L + E CM+ +
Sbjct: 154 LTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELD 213
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-----DEVSWNTMITGYAQNNYLAEAQRLF 270
SL+ +VK ++LG A +FD P R + WN +I G + + +A +LF
Sbjct: 214 SFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLF 273
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
+ P K+ +W+ ++ G+ +NG +D A +FD MPEKN VSW M+ G+ + + A
Sbjct: 274 KAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALS 333
Query: 331 LFEAM-----------------TCKNV----------------------ASWNTMITGYA 351
+F M C + A ++ YA
Sbjct: 334 MFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYA 393
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G I A +F Q +W +I G+A G+SE ++ F +M G + + F +
Sbjct: 394 KCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLA 453
Query: 412 VLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VD 469
+L+ C + +++G + + E ++ M + G ++EA E + ++
Sbjct: 454 LLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMN 513
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
D + W + H K + F K + ++P
Sbjct: 514 PDFVIWGALFCACRAH--KKTKMAKFALNKLLKLEP 547
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 179/416 (43%), Gaps = 48/416 (11%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
+I+ + I H+ +F+ + ++ A+I G + + +++ F M R G + +
Sbjct: 119 LISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPD 178
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
R + VL + A L S ELG +H +++ G E FV +L+ MY K + A+ F+
Sbjct: 179 RLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFD 238
Query: 466 EIVDK-----DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
E ++ + WN +I G + G K A+ LF++M K ++++ ++ +
Sbjct: 239 ESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMP----KKENVSWSTLIDGFAKN 294
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE---PDAAT 577
G +++ E F M N +T MVD R G ++A ++ M E P+A T
Sbjct: 295 GDMDRAMELFDQMPEK-----NVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFT 349
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL------LSNLYAASGRWGDVSKV 631
+ L AC G E + + I ++ G+++ L ++YA G S+V
Sbjct: 350 IVSALSACAKIGGLEAGLRIHKYI-----KDNGLHLTEALGTALVDMYAKCGNIESASEV 404
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFK-LKQDGFVYS 690
+ + ++ T W G +H ++ A +++ F +K D V+
Sbjct: 405 FGETEQKSIRTWTVMIW------------GWAIHGHSEQAIACFKQMMFAGIKPDEVVFL 452
Query: 691 TKLV--LH----DVGEEEKEHM-LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCE 739
L +H D+G + M L Y E Y ++ GR ++ + LR E
Sbjct: 453 ALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIE 508
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H Q++ + + L+ S+ + F K++ ++N +I G +
Sbjct: 99 QIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNS 158
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+A+ F M GIKPD +T +L + + E G + M G+ +S
Sbjct: 159 HFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMA-IHCMILRCGIELDSFVR 217
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT----WGALLGACRLYGKTELAEKAAEVIF 602
+VD+ + +L A + P D+ + W L+ C G + A K +F
Sbjct: 218 VSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVK----LF 273
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDVSK 630
+ P+ V S L + GD+ +
Sbjct: 274 KAMPKKEN--VSWSTLIDGFAKNGDMDR 299
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/698 (32%), Positives = 392/698 (56%), Gaps = 35/698 (5%)
Query: 115 FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN-GYADAA 173
F + + L S N +++ YV++ +L A LF+ + ++ +W ++SG+A+ G ++
Sbjct: 59 FKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELV 118
Query: 174 RRIFDRMLEK----NEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNSLMG 224
+F M N+ + + +L +Q G+ A +L + +VV NS++
Sbjct: 119 FSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWIL-RNGVGGDVVLENSILD 177
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
++K K A+ F+ M +D VSWN MI Y + + ++ +F P KDV +W +
Sbjct: 178 LYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTI 237
Query: 285 VSGYVQNG----KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+ G +Q G +++ + E + V+++ + +++ R+L + +
Sbjct: 238 IDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGL 297
Query: 341 AS----WNTMITGYAQSGEITHARNLFD----------------RMPQHDCISWAAIIAG 380
S ++++ Y + G + A + + P+ +SW+++++G
Sbjct: 298 NSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSG 357
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Y +G ED ++ F M ++ +++S CAN LE GKQ+H + K+G
Sbjct: 358 YVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRID 417
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+VG++L+ MY K GS+++A FE+I + +V+ W +MI+G A HG GK+A+ LFE M
Sbjct: 418 AYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLN 477
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
+GI P+++T VG+L+ACSH GL+E+G YF M Y + P +HYT MV+L GRAG L
Sbjct: 478 LGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLI 537
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA+N + + W + L +CRL+ + + +E++ + P + Y+LLSN+ +
Sbjct: 538 EAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCS 597
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
++ +W + + VR M RGVKK G SW+++++++H+F+VGD HP+ IY+YL+ L
Sbjct: 598 SNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIG 657
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
+LK+ G+ KLV+ DV EE+ E ++ +HSEKLA+ + I++ PIR+MKNLR+C D
Sbjct: 658 RLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICND 717
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CHN K+ S+++ R II+RD +RFHHF SCSCG+YW
Sbjct: 718 CHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/479 (41%), Positives = 312/479 (65%), Gaps = 6/479 (1%)
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWNTMITGYAQSGEITHARN 361
E+N V++ +++G+ ++ R + + +V ++ Y + + AR
Sbjct: 7 ERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARA 66
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM--KRYGERLNRSPFTSVLSTCANL 419
F+++ + + +SW+A++A YAQ+G++ +L L+ EM R G NR F ++L C+ L
Sbjct: 67 AFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFL 126
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+L G+++H + + GF+ V NAL+ Y +CGS+ +A F+ + +DVISW++MI
Sbjct: 127 GALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMI 186
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
+ +A+ G +A+ L+ M + G PDDI + +L ACS++G+VE ++F S+ D V
Sbjct: 187 SAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQV 246
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P +HY CMVD+LGRAG+L +A++L++ MPF P + +L AC+LY E E AAE
Sbjct: 247 EPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAE 306
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
V+FE++PEN+ Y+ L+N+Y+A+ R D +++R M +RG+KK G SW+EV ++VH F
Sbjct: 307 VVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFI 366
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
GD +HP++D IYA ++ L ++K+ G+ TK+VL DV E+EKE++L YHSEKLA+A+G
Sbjct: 367 AGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFG 426
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++S P G P+R++KNLRVC DCH A K ISK+ GR I++RD NRFHHF G CSC DYW
Sbjct: 427 LISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 9/230 (3%)
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M+ G N+ + +VLS SLE G+++H ++ G E VG AL+ MY KC S
Sbjct: 1 MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV--GIKPDDITMVGIL 514
VEEA AFE+I +V+SW+ M+A YA++G + AL L+ M + G+ P+ +T + +L
Sbjct: 61 VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120
Query: 515 SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
ACS G + +G + ++ + G + +V+ GR G L +A+ + M D
Sbjct: 121 DACSFLGALAEGRK-IHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMR-RRD 178
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPENA--GMYVLLSNLYAAS 622
+W +++ A G+ ++A E+ M E + +S L+A S
Sbjct: 179 VISWSSMISAFAQRGRV---DEAMELYHRMLSEGTLPDDIIFISVLFACS 225
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 139/298 (46%), Gaps = 44/298 (14%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNL 145
R+ V+Y ++SG+ G L+ R+V ++ + D++ +++ Y + +S+ AR
Sbjct: 8 RNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAA 67
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM------LEKNEISWNGLLAAYVQNG 199
FE + + +VVSW+ ML+ YAQNG+A A ++ M + N +++ LL A G
Sbjct: 68 FEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLG 127
Query: 200 RIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMIT 255
+ E + E + ++V N+L+ + + LGDAK +FD M RD +SW++MI+
Sbjct: 128 ALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMIS 187
Query: 256 GYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS 311
+AQ + EA R+ E + D + +++ +G V+ + F +
Sbjct: 188 AFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRS-------- 239
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
I G Q + + + M+ ++G++ A +L MP H
Sbjct: 240 ----IVGDTQVE--------------PTLEHYACMVDVLGRAGKLRDAEDLLRLMPFH 279
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 146/373 (39%), Gaps = 86/373 (23%)
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMI 300
R++V++ T+++G+ L E +R+ DV TA+V+ Y + V+EAR
Sbjct: 8 RNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAA 67
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-------------------TCK--- 338
F+ + N VSW+AM+A Y Q MA EL+ M C
Sbjct: 68 FEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLG 127
Query: 339 -------------------NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
++ N ++ Y + G + A+ +FD M + D ISW+++I+
Sbjct: 128 ALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMIS 187
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
+AQ G ++++ L+ M G + F SVL C+N +E +V
Sbjct: 188 AFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIV------ 241
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
G + V+ + + M+ R G +DA L M
Sbjct: 242 ---------------GDTQ---------VEPTLEHYACMVDVLGRAGKLRDAEDLLRLMP 277
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKG---TEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
P + + +LSAC VE+G E + ++ + NS Y + ++ A
Sbjct: 278 ---FHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPE-----NSSPYITLANIYSAA 329
Query: 557 GRLDEAQNLMKNM 569
R +A + K M
Sbjct: 330 KRPKDAARIRKLM 342
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 151 KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACM 206
+R+ V++ T+LSG+ G + RR+ R+ LE + I L+ Y + +EEA
Sbjct: 7 ERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARA 66
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP------VRDEVSWNTMITGYAQN 260
FE + VVSW++++ + + A ++ M + V++ T++ +
Sbjct: 67 AFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFL 126
Query: 261 NYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
LAE +++ E D+ A+V+ Y + G + +A+++FD M ++ +SW++MI
Sbjct: 127 GALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMI 186
Query: 317 AGYVQTKRMDMARELFEAM 335
+ + Q R+D A EL+ M
Sbjct: 187 SAFAQRGRVDEAMELYHRM 205
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 115/236 (48%), Gaps = 22/236 (9%)
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGD 234
R +E+N++++ +L+ + G +EE + A +V+ +L+ + K + + +
Sbjct: 4 RGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEE 63
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------APVKDVFTWTAMVS 286
A+ F+++ + VSW+ M+ YAQN + A L+ E AP + T+ ++
Sbjct: 64 ARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNR--VTFITLLD 121
Query: 287 GYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
G + E R I A+ E+ + V NA++ Y + + A+ +F+ M ++V S
Sbjct: 122 ACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVIS 181
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLF 394
W++MI+ +AQ G + A L+ RM D I + +++ + SG E S F
Sbjct: 182 WSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFF 237
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM--------PRRSSVSYNAMISGYLLNGQLDPA 111
++ W+ + + +NG AL ++ M P R V++ ++ G L
Sbjct: 75 NVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNR--VTFITLLDACSFLGALAEG 132
Query: 112 RQVFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
R++ + +R DLV N +++ Y R SL A+ +F+ M +RDV+SW++M+S +AQ
Sbjct: 133 RKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQR 192
Query: 168 GYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFES 210
G D A ++ RML + ++I + +L A +G +E + F S
Sbjct: 193 GRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRS 239
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/466 (43%), Positives = 301/466 (64%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
NA++ Y + MD A LFE M +++ASW ++I+G +SG++ AR+LFD MP+ D I
Sbjct: 200 NALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTI 259
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
+W A+I GY Q G D+L F M+ R + SV++ CA L +LE G+ +
Sbjct: 260 AWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYM 319
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
++G + FVGNAL+ MY KCGS+E A F+++ ++D +W +I G A +G G++A+
Sbjct: 320 GRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAI 379
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+F M PD++T VG+L+AC+H GLV+KG E+F SM Y + P HY C++D+
Sbjct: 380 DMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDV 439
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAG+L EA + + MP +P++ WG LL +CR+YG +E+ E AAE + E++P+N+ Y
Sbjct: 440 LGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAY 499
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
+LLSN+YA S RW DV ++R + ++G+KK G S +E+ +H F D HP IY
Sbjct: 500 ILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIY 559
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
+ LE + L+ G+V VL +V EEEK+ +L +HSEKLAV + +L+ + IR++
Sbjct: 560 SKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIV 619
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLR+C DCHNAIK ISK+ GR +I+RD RFHHF GSCSC DYW
Sbjct: 620 KNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 189/457 (41%), Gaps = 80/457 (17%)
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPKRD----VVSWNTMLSGYAQNGYADAARRIFDR 179
V WN +ISG+ R+ + F M + V++ ++LS + ++ R
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 180 MLEKNEIS----WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+LE + N L+ Y + G ++ A +LFE + SW S++ G V+ ++ A
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQN 291
+ +FD MP RD ++W MI GY Q +A F + D FT ++V+ Q
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
G ++ T W + G R+ + ++F N +I Y+
Sbjct: 307 GALE-------------TGEWARIYMG-----RLGIKMDVFVG---------NALIDMYS 339
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G I A ++F M D +W AII G A +G E+++ +F M R + + F
Sbjct: 340 KCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVG 399
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
VL+ C + ++ G++ F+ S+ EAY+ +
Sbjct: 400 VLTACTHAGLVDKGREF-------------FL------------SMTEAYN-----ISPT 429
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG---TE 528
V+ + +I R G K+AL + M +KP+ +L++C G E G E
Sbjct: 430 VVHYGCLIDVLGRAGKLKEALDTIDKMP---MKPNSTIWGTLLASCRVYGNSEIGELAAE 486
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
++ D NS Y + ++ ++ R + + +
Sbjct: 487 RLLELDPD-----NSTAYILLSNMYAKSNRWKDVRRI 518
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 41/307 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NA++ Y G +D A +F+ M R + SW +ISG VR+ + AR+LF+ MP+RD +
Sbjct: 200 NALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTI 259
Query: 156 SWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
+W M+ GY Q G A F M + +E + ++ A Q G +E
Sbjct: 260 AWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETG------- 312
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
W + G RLG +F N +I Y++ + A +F+
Sbjct: 313 ------EWARIYMG-----RLGIKMDVF---------VGNALIDMYSKCGSIERALDVFK 352
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDM 327
+ +D FTWTA++ G NG+ +EA +F A+ + V++ ++ +D
Sbjct: 353 DMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDK 412
Query: 328 ARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGY 381
RE F +MT V + +I ++G++ A + D+MP + + W ++A
Sbjct: 413 GREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASC 472
Query: 382 AQSGYSE 388
G SE
Sbjct: 473 RVYGNSE 479
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 146/324 (45%), Gaps = 21/324 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D R N + + G D+A +F M RS S+ ++ISG + +GQ+D AR +FD MP
Sbjct: 195 DQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMP 254
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSGYAQNGYADA--- 172
+RD ++W MI GYV+ A F M + D + ++++ AQ G +
Sbjct: 255 ERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEW 314
Query: 173 ARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKR 231
AR R+ ++ + N L+ Y + G IE A +F+ N + +W +++ G R
Sbjct: 315 ARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGR 374
Query: 232 LGDAKWIFDRM----PVRDEVSWNTMITGYAQNNYLAEAQRLF---EEA--PVKDVFTWT 282
+A +F RM DEV++ ++T + + + F EA V +
Sbjct: 375 GEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYG 434
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAG---YVQTKRMDMARELFEAMTCK 338
++ + GK+ EA D MP K N+ W ++A Y ++ ++A E +
Sbjct: 435 CLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPD 494
Query: 339 NVASWNTMITGYAQSGEITHARNL 362
N ++ + YA+S R +
Sbjct: 495 NSTAYILLSNMYAKSNRWKDVRRI 518
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 333/571 (58%), Gaps = 14/571 (2%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKD 277
M + R+ A+ +FD M RD V+WNTMI Y + + EA +LFEE + D
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMARELFE 333
+VS + G + R I++ + E + T A++ Y MDMARE F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
M+ +N+ M++GY++ G + A+ +FD+ + D + W +I+ Y +S Y +++LR+
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM G + + SV+S CANL L+ K +H + G E+ + NAL+ MY K
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG ++ FE++ ++V+SW++MI + HG DAL LF MK ++P+++T VG+
Sbjct: 392 CGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGV 451
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L CSH+GLVE+G + F SM +Y + P +HY CMVDL GRA L EA ++++MP
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+ WG+L+ ACR++G+ EL + AA+ I E+EP++ G VL+SN+YA RW DV +R
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRR 571
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M ++ V K G S ++ K H F +GD H + + IYA L+E+ KLK G+V
Sbjct: 572 VMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGS 631
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP------IRVMKNLRVCEDCHNAIKH 747
VL DV EEEK+ ++ +HSEKLA+ +G+++ IR++KNLRVCEDCH K
Sbjct: 632 VLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKL 691
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+SK+ R II+RD RFH + G CSC DYW
Sbjct: 692 VSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 208/453 (45%), Gaps = 43/453 (9%)
Query: 81 LHVFNSMPRRSSVS-YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
L F+ +P +VS +A+ G L+G + D + + Y +
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDM------YASCGRI 162
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ-- 197
+ ARN+F+ M RDVV+WNTM+ Y + G D A ++F+ M + N + +L V
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 198 ----NGRIEEAC--MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
N R A L E+ + +L+ + + A+ F +M VR+
Sbjct: 223 GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EK 307
M++GY++ L +AQ +F++ KD+ WT M+S YV++ EA +F+ M +
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHARNLF 363
+ VS ++I+ +D A+ + + + S N +I YA+ G + R++F
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
++MP+ + +SW+++I + G + D+L LF MK+ N F VL C++ +E
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 424 LGKQLHGQL-----VKVGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWN 476
GK++ + + E GC V ++ + + EA E + V +V+ W
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGCMVD-----LFGRANLLREALEVIESMPVASNVVIWG 517
Query: 477 TMIAGYARHG---FGKDALMLFESMKTVGIKPD 506
++++ HG GK F + + + ++PD
Sbjct: 518 SLMSACRIHGELELGK-----FAAKRILELEPD 545
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 171/383 (44%), Gaps = 61/383 (15%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF------NSMP-------------R 89
+RN D+ WN I + R G D A +F N MP R
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 90 RSSVSYN--------------------AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVM 129
++ YN A+++ Y G +D AR+ F +M R+L M
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNE 185
+SGY + L A+ +F+ K+D+V W TM+S Y ++ Y A R+F+ M ++ +
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 186 ISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+S +++A G +++A + + E+ N+L+ + K L + +F++
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEA 297
MP R+ VSW++MI + + ++A LF ++V T+ ++ G +G V+E
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 298 RMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYA 351
+ IF +M ++ ++ + M+ + + + A E+ E+M NV W ++++
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 352 QSGEIT----HARNLFDRMPQHD 370
GE+ A+ + + P HD
Sbjct: 525 IHGELELGKFAAKRILELEPDHD 547
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 172/372 (46%), Gaps = 28/372 (7%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV----R 135
A +VF+ M R V++N MI Y G +D A ++F++M +++ +++ V R
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSG----YAQNGYADAARRIFDRMLEKNEISWNGL 191
++ R ++E + + DV +L+ YA G D AR F +M +N +
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DE 247
++ Y + GR+++A ++F+ ++V W +++ +V+ +A +F+ M D
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDA 303
VS ++I+ A L +A+ + V ++ A+++ Y + G +D R +F+
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHA 359
MP +N VSW++MI A LF M +NV ++ ++ G + SG +
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ +F M I+ + ++ + ++ ++L + M N + S++S
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS---NVVIWGSLMS 521
Query: 415 TCANLASLELGK 426
C LELGK
Sbjct: 522 ACRIHGELELGK 533
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 40/295 (13%)
Query: 358 HARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+A N+F +P + I + + ++S ++ + ++ G RL++ F +L
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
+ +++L G +LHG K+ FV + MY CG + A + F+E+ +DV++WN
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG-----------LVEK 525
TMI Y R G +A LFE MK + PD++ + I+SAC TG L+E
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 526 GTEY-------FYSMNRDYGVIPNSKHY------------TCMVDLLGRAGRLDEAQNLM 566
+M G + ++ + T MV + GRLD+AQ +
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+ D W ++ A Y +++ ++A V EM +P+ M+ ++S
Sbjct: 302 DQTE-KKDLVCWTTMISA---YVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/537 (38%), Positives = 322/537 (59%), Gaps = 9/537 (1%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMP 305
+ +++ Y + Y +AQRLF+E P +D+ +W +++SG G + RM ++
Sbjct: 178 DRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 237
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARN 361
+ N V+ ++++ +D + L + ++ N++I Y + G + A
Sbjct: 238 QPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 297
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+ MP +SW +++ + +GY+E + LF MKR G +++ ++L C +
Sbjct: 298 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 357
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+ +H + + GF A + ALL +Y K G + + FEEI D+D I+W M+AG
Sbjct: 358 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAG 417
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA H G++A+ LF+ M G++ D +T +LSACSH+GLVE+G +YF M+ Y V P
Sbjct: 418 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 477
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
HY+CMVDLLGR+GRL++A L+K+MP EP + WGALLGACR+YG EL ++ AE +
Sbjct: 478 RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 537
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
++P + Y++LSN+Y+A+G W SKVR M++R + + G S++E NK+H F VG
Sbjct: 538 LSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVG 597
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D LHP D I+ LEEL K+ + G T+ VLHD+ EE K M+ HSEKLA+A+G+L
Sbjct: 598 DQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLL 657
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+G P+ + KNLR+C DCH+ K S + R II+RD+ RFHHF+ G CSC DYW
Sbjct: 658 VTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 165/368 (44%), Gaps = 68/368 (18%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-----LEK 183
++S Y + A+ LF+ MP RD+VSWN+++SG + GY A F RM +
Sbjct: 180 LVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 239
Query: 184 NEISWNGLLAAYVQNGRIEEACML------FESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
NE++ +++A G ++E L +VV NSL+ + K L A
Sbjct: 240 NEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVV--NSLINMYGKLGFLDAASQ 297
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----------EEAPV------------ 275
+F+ MPVR VSWN+M+ + N Y + LF ++A +
Sbjct: 298 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 357
Query: 276 -----------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
D+ TA+++ Y + G+++ + IF+ + +++T++W AM+AG
Sbjct: 358 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAG 417
Query: 319 YVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRM-------P 367
Y A +LF+ M + V ++ +++ + SG + + F+ M P
Sbjct: 418 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 477
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+ D ++ ++ +SG ED+ L M + + ++L C ++ELGK+
Sbjct: 478 RLD--HYSCMVDLLGRSGRLEDAYELIKSMPM---EPSSGVWGALLGACRVYGNVELGKE 532
Query: 428 LHGQLVKV 435
+ QL+ +
Sbjct: 533 VAEQLLSL 540
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 189/445 (42%), Gaps = 73/445 (16%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP-----QRD 122
++ + + G + A +F+ MP R VS+N+++SG G L F +M Q +
Sbjct: 181 VSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPN 240
Query: 123 LVSW-----------------------------------NVMISGYVRNKSLSAARNLFE 147
V+ N +I+ Y + L AA LFE
Sbjct: 241 EVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFE 300
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEE 203
MP R +VSWN+M+ + NGYA+ +F+ M + ++ + LL A G +
Sbjct: 301 EMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQ 360
Query: 204 A----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
A + N +++ +L+ + K RL ++ IF+ + RD ++W M+ GYA
Sbjct: 361 AESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAV 420
Query: 260 NNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---- 311
+ EA +LF+ E D T+T ++S +G V+E + F+ M E V
Sbjct: 421 HACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLD 480
Query: 312 -WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDR---M 366
++ M+ ++ R++ A EL ++M + + W ++ G + + + ++ +
Sbjct: 481 HYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSL 540
Query: 367 PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
D ++ + Y+ +G + ++ MK RL R+P S + + +G
Sbjct: 541 DPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKE--RRLTRNPGCSFIEHGNKIHRFVVGD 598
Query: 427 QLHG----------QLVKVGFEAGC 441
QLH +L++ EAGC
Sbjct: 599 QLHPRSDEIHTKLEELIRKIXEAGC 623
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 43/293 (14%)
Query: 387 SEDSLR----LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCF 442
S DS R +F+ L S S++ ++ S+ +H +++K + F
Sbjct: 116 SNDSTRTKVAVFLGKLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGF 175
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-V 501
+G+ L+ MY K G E+A F+E+ ++D++SWN++++G + G+ L F M+T
Sbjct: 176 IGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 235
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G +P+++T++ ++SAC+ G +++G + + + G+ +K ++++ G+ G LD
Sbjct: 236 GRQPNEVTLLSVVSACAXMGALDEG-KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDA 294
Query: 562 AQNLMKNMP----------------------------------FEPDAATWGALLGACRL 587
A L + MP PD AT ALL AC
Sbjct: 295 ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTD 354
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYV--LLSNLYAASGRWGDVSKVRLKMRDR 638
G AE I NA + + L NLYA GR + +++DR
Sbjct: 355 TGLGRQAESIHAYIHRC-GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR 406
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 336/556 (60%), Gaps = 10/556 (1%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA-----QRLFEEAPVKDVFTWTAMVS 286
L A+ +FDR+ + WNTMI GY+ + EA L+ P + +T+ ++
Sbjct: 68 LAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVP-HNAYTFPFLLK 126
Query: 287 GYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
++E + I + + + N+++ Y ++ + AR LF+ + ++ S
Sbjct: 127 ACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVS 186
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN+MI GY + GEI A +F+ MP+ + ISW ++I+G +G +++L LF M+ G
Sbjct: 187 WNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGI 246
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+L+ S L CA+L L+ GK +H + K E +G L+ MY KCG +EEA
Sbjct: 247 KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIE 306
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F ++ +K V W MI+GYA HG G++AL F M+T G++P+ +T GIL+ACSH GL
Sbjct: 307 VFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 366
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V + F SM R +G P+ +HY CMVDLLGRAG L EA+ L++NMP +P+AA WGALL
Sbjct: 367 VHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
AC ++G EL ++ +++ +++P + G Y+ L++++AA+G W ++VR +M+++GV K
Sbjct: 427 NACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSK 486
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
+ G S + V H F GD HP+ I LE++ +L+++G+ +L D+ ++E
Sbjct: 487 LPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKE 546
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE + +HSEKLAV +G++S G IR++KNLRVCEDCH IK ISK+ R I++RD
Sbjct: 547 KETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRT 606
Query: 763 RFHHFSGGSCSCGDYW 778
RFH F G+C+CGDYW
Sbjct: 607 RFHLFKDGNCTCGDYW 622
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 196/448 (43%), Gaps = 67/448 (14%)
Query: 104 LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
++GQ+ + D++P L+++ + SL+ AR +F+ + + + WNTM+ G
Sbjct: 37 IHGQMLKTGLILDEIPASKLLAF----CASPNSGSLAYARTVFDRIFRPNTFMWNTMIRG 92
Query: 164 YAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
Y+ + + A ++ ML N ++ LL A +EE + + E
Sbjct: 93 YSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSE 152
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
+ + NSL+ + K + A+ +FD++ RD VSWN+MI GY + + A +F P
Sbjct: 153 IYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPE 212
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMAR-- 329
+++ +WT+M+SG V GK EA +F M N + +Q +D +
Sbjct: 213 RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 272
Query: 330 ---------ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
E+ + C +I YA+ G++ A +F +M + W A+I+G
Sbjct: 273 HAYIKKHEIEIDPILGC-------VLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISG 325
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
YA G ++L F++M+ G N+ FT +L+ C++ + K L FE+
Sbjct: 326 YAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLL--------FES- 376
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
E H F+ ++ + M+ R G K+A L E+M
Sbjct: 377 -----------------MERIHGFKPSIEH----YGCMVDLLGRAGLLKEAEELIENMP- 414
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTE 528
+KP+ +L+AC G +E G +
Sbjct: 415 --VKPNAAIWGALLNACHIHGNLELGKQ 440
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 138/269 (51%), Gaps = 33/269 (12%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG + +AR +FDR+ + + W +I GY+ S E++L L+ M + N F +
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L C+++++LE +Q+H ++K+GF + + N+LL +Y K G ++ A F+++ +D
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 473 ISWNTMIAGYAR-------------------------------HGFGKDALMLFESMKTV 501
+SWN+MI GY + G K+AL LF M+T
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
GIK D++ +V L AC+ G++++G ++ ++ + + + + ++D+ + G L+E
Sbjct: 245 GIKLDNVALVSTLQACADLGVLDQG-KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEE 303
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGK 590
A + + M E + W A++ ++G+
Sbjct: 304 AIEVFRKME-EKGVSVWTAMISGYAIHGR 331
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 165/366 (45%), Gaps = 29/366 (7%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
+ N++++ Y +G + AR +FDQ+ QRD VSWN MI GY + + A +F MP+R+
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN 214
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
++SW +M+SG G A +F RM ++ + ++ L A G +++ +
Sbjct: 215 IISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHA 274
Query: 210 SKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
E+ + L+ + K L +A +F +M + W MI+GYA + E
Sbjct: 275 YIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGRE 334
Query: 266 AQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSWNAMI 316
A F + V T+T +++ G V EA+++F++M + + + M+
Sbjct: 335 ALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMV 394
Query: 317 AGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDC---- 371
+ + A EL E M K N A W ++ G + + + + Q D
Sbjct: 395 DLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGG 454
Query: 372 --ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
I A+I +A +G + R+ +MK G +++ P SV+S G + H
Sbjct: 455 RYIHLASI---HAAAGEWNQAARVRRQMKEQG--VSKLPGCSVISVNGTAHEFLAGDESH 509
Query: 430 GQLVKV 435
Q+ ++
Sbjct: 510 PQIKEI 515
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 152/353 (43%), Gaps = 57/353 (16%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-----PQR---------------- 121
VF+ + R ++ +N MI GY + + + A ++ M P
Sbjct: 74 VFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA 133
Query: 122 ------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
++ + N +++ Y ++ + +AR LF+ + +RD VSWN+M+ G
Sbjct: 134 LEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG 193
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSW 219
Y + G + A IF+ M E+N ISW +++ V G+ +EA LF + + V+
Sbjct: 194 YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVAL 253
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
S + L KWI + D + +I YA+ L EA +F +
Sbjct: 254 VSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEE 313
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAREL 331
K V WTAM+SGY +G+ EA F M E N +++ ++ + A+ L
Sbjct: 314 KGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLL 373
Query: 332 FEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
FE+M ++ + M+ ++G + A L + MP + + W A++
Sbjct: 374 FESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC---KCGSVEEAY 461
N + +L C+N+ L +Q+HGQ++K G + LL +C GS+ A
Sbjct: 17 NAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLA-FCASPNSGSLAYAR 72
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ I + WNTMI GY+ ++AL+L+ M + + T +L ACS
Sbjct: 73 TVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMS 132
Query: 522 LVEKGTE-YFYSMNRDYGVIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
+E+ + + + + +G S+ YT ++++ ++G + A+ L + + D +W
Sbjct: 133 ALEETQQIHAHIIKMGFG----SEIYTTNSLLNVYSKSGDIKSARLLFDQVD-QRDTVSW 187
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
+++ Y K E A E+ M N + + + +G+ + + +M+
Sbjct: 188 NSMIDG---YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244
Query: 639 GVK 641
G+K
Sbjct: 245 GIK 247
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/575 (39%), Positives = 341/575 (59%), Gaps = 19/575 (3%)
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN-----TMITGYAQNNYLAEAQRLFEEA 273
+ SL+ + K L K + R+ + +++N ++ Y+ N L A LF++
Sbjct: 61 YASLLESCISAKALEPGKQLHARL-CQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKI 119
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKRMDM 327
P ++F W ++ Y NG + A ++ M P+ T+ + + T +
Sbjct: 120 PKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST--IGE 177
Query: 328 ARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
R + E + ++V ++ YA+ G + AR++FD++ D + W +++A YAQ
Sbjct: 178 GRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQ 237
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+G+ ++SL L EM G R + +V+S+ A++A L G+++HG + GF+ V
Sbjct: 238 NGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKV 297
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
AL+ MY KCGSV+ A FE + +K V+SWN +I GYA HG +AL LFE M
Sbjct: 298 KTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA- 356
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+PD IT VG L+ACS L+++G + M RD + P +HYTCMVDLLG G+LDEA
Sbjct: 357 QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAY 416
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+L++ M PD+ WGALL +C+ +G ELAE A E + E+EP+++G YV+L+N+YA SG
Sbjct: 417 DLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSG 476
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+W V+++R M D+G+KK SW+EV+NKV+ F GD HP IYA L+ LE ++
Sbjct: 477 KWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMR 536
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+V T V HDV E+EK M+ HSE+LA+A+G++S G + + KNLR+CEDCH
Sbjct: 537 EAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHV 596
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK ISKI R I +RD NR+HHF G CSCGDYW
Sbjct: 597 AIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 10/218 (4%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N + S+L +C + +LE GKQLH +L ++G + L+ Y C S+ A+H F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
++I ++ WN +I YA +G + A+ L+ M G+KPD+ T+ +L ACS +
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + R G + +VD+ + G + +A+++ + + DA W ++L A
Sbjct: 177 EGRVIHERVIRS-GWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAA 234
Query: 585 CRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSN 617
Y + +++ + EM P A + ++S+
Sbjct: 235 ---YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISS 269
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 159/395 (40%), Gaps = 66/395 (16%)
Query: 64 WNVAITTHMRN--GCCDS---ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
+N+ + T + N C+S A H+F+ +P+ + +N +I Y NG + A ++ QM
Sbjct: 91 YNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQM 150
Query: 119 PQ---------------------------------------RDLVSWNVMISGYVRNKSL 139
+ RD+ ++ Y + +
Sbjct: 151 LEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCV 210
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
AR++F+ + RD V WN+ML+ YAQNG+ D + + M K L + +
Sbjct: 211 VDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSS 270
Query: 200 RIEEACMLFESKAN---W-EVVSWN-----SLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
+ AC+ + + W +N +L+ + K + A +F+R+ + VSW
Sbjct: 271 A-DIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSW 329
Query: 251 NTMITGYAQNNYLAEAQRLFE---EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
N +ITGYA + EA LFE + D T+ ++ + +DE R +++ M
Sbjct: 330 NAIITGYAMHGLAVEALDLFERMMKEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRD 389
Query: 308 NTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEITHARN 361
++ + M+ ++D A +L M + W ++ G + A
Sbjct: 390 CRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEV 449
Query: 362 LFDRMPQ---HDCISWAAIIAGYAQSGYSEDSLRL 393
+++ + D ++ + YAQSG E RL
Sbjct: 450 ALEKLIELEPDDSGNYVILANMYAQSGKWEGVARL 484
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 119/314 (37%), Gaps = 87/314 (27%)
Query: 107 QLDPARQVFDQMPQR--DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY 164
QL P +V D P + + ++ + K+L + L + + + ++N L+
Sbjct: 41 QLIPQHKV-DSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGI-AYNLDLATK 98
Query: 165 AQNGYADA-----ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES--------- 210
N Y+ A +FD++ + N WN L+ AY NG E A L+
Sbjct: 99 LVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPD 158
Query: 211 ----------------------------KANWE--VVSWNSLMGGFVKQKRLGDAKWIFD 240
++ WE V +L+ + K + DA+ +FD
Sbjct: 159 NFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFD 218
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV---------------------- 278
++ RD V WN+M+ YAQN + E+ L E K V
Sbjct: 219 KIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPH 278
Query: 279 ------FTW-----------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
F W TA++ Y + G V A ++F+ + EK VSWNA+I GY
Sbjct: 279 GREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAM 338
Query: 322 TKRMDMARELFEAM 335
A +LFE M
Sbjct: 339 HGLAVEALDLFERM 352
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/618 (39%), Positives = 341/618 (55%), Gaps = 17/618 (2%)
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK--RLGD 234
F + L N++ L + N + L + ++ N L+ + L
Sbjct: 8 FKKPLNSNQLQLFSLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSY 67
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAE-AQRLFEEA-------PVKDVFTWTAMVS 286
A +FD++P D +NTMI +A + + R+F P + F +
Sbjct: 68 AHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKAC 127
Query: 287 GY---VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW 343
G V G+ I + E N NAMI Y +D AR +F+ +++ SW
Sbjct: 128 GNGLGVLEGEQIRVHAIKIGL-ESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSW 186
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
N MI GY SGEI A+ +FD M + D +SW IIAGY Q G +++L LF EM + G
Sbjct: 187 NIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPP 246
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N S L+ CANL +L+ G+ +H + K + + +LL MY KCG ++ A
Sbjct: 247 PNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKV 306
Query: 464 F--EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F E + V WN MI GYA HG K+A+ LFE MK + P+ +T V +L+ACSH
Sbjct: 307 FHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGK 366
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE+G YF SM YG+ P +HY CMVDLLGR+G L EA+ + NMP PDA WGAL
Sbjct: 367 LVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGAL 426
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGACR++ E ++ ++I E++ ++ G +VLL+NLY+ASG+W + VR K+ G K
Sbjct: 427 LGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRK 486
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV-GE 700
K G S +E+ H F VGD HP+ ++Y +L+E+ KLK G+V VL D+ E
Sbjct: 487 KTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDE 546
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
E+KE L HSEKLA+A+G+++ P G IR++KNLRVC DCH A K ISK+ R II+RD
Sbjct: 547 EDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRD 606
Query: 761 NNRFHHFSGGSCSCGDYW 778
R+HHF G CSC DYW
Sbjct: 607 RIRYHHFKDGFCSCKDYW 624
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 202/500 (40%), Gaps = 98/500 (19%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGY--VRNKSLSAARNLFEM------MPKRDVVSW 157
G L A Q+FDQ+P+ D+ +N MI + + S ++ R M +P R +
Sbjct: 63 GSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVF 122
Query: 158 NTMLSGYAQNGYADAARRI--FDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
G R+ LE N N ++ Y G ++EA +F+ + +
Sbjct: 123 VFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQD 182
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--- 272
+ SWN ++GG+V +G AK +FD M RD VSW T+I GY Q EA LF E
Sbjct: 183 LYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQ 242
Query: 273 -APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMIAGYVQTKRMD 326
P + FT + ++ +D+ R I +K+ + N +++ Y + +D
Sbjct: 243 TGPPPNEFTLASALAACANLVALDQGRWI-HVYIDKSEIKMNERLLASLLDMYAKCGEID 301
Query: 327 MARELF--EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
A ++F E V WN MI GYA G+
Sbjct: 302 FAAKVFHDEYGLKLKVWPWNAMIGGYAMHGK----------------------------- 332
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
S++++ LF +MK N+ F ++L+ C+ HG+LV+ G G F
Sbjct: 333 --SKEAIDLFEQMKVEKVSPNKVTFVALLNACS-----------HGKLVEEG--RGYF-- 375
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
S+ +Y ++ ++ + M+ R G K+A E++ + +
Sbjct: 376 ----------KSMASSYG-----IEPEIEHYGCMVDLLGRSGLLKEAE---ETVFNMPMA 417
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP--NSKHYTCMV---DLLGRAGRL 559
PD +L AC +E+G R +I +S H C V +L +G+
Sbjct: 418 PDATIWGALLGACRIHKDIERG-------QRIGKIIKELDSDHIGCHVLLANLYSASGQW 470
Query: 560 DEAQNLMKNMPFEPDAATWG 579
DEA+ + + + T G
Sbjct: 471 DEAKAVRQKIEVSGRKKTPG 490
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 115/225 (51%), Gaps = 18/225 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
NAMI Y G +D AR+VFD +DL SWN+MI GYV + + A+ +F+ M +RDVV
Sbjct: 156 NAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVV 215
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA-----YVQNGR-IEEAC 205
SW T+++GY Q G A +F ML+ NE + LAA + GR I
Sbjct: 216 SWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYI 275
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF-DRMPVRDEV-SWNTMITGYAQNNYL 263
E K N +++ SL+ + K + A +F D ++ +V WN MI GYA +
Sbjct: 276 DKSEIKMNERLLA--SLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKS 333
Query: 264 AEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
EA LFE+ V+ V T+ A+++ V+E R F +M
Sbjct: 334 KEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSM 378
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 22/275 (8%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + G D A VF+ + S+N MI GY+ +G++ A+++FD+M +RD+V
Sbjct: 156 NAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVV 215
Query: 125 SWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
SW +I+GYV+ A +LF M P + + + L+ A D R I
Sbjct: 216 SWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWI-HVY 274
Query: 181 LEKNEISWN-----GLLAAYVQNGRIEEACMLF--ESKANWEVVSWNSLMGGFVKQKRLG 233
++K+EI N LL Y + G I+ A +F E +V WN+++GG+ +
Sbjct: 275 IDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSK 334
Query: 234 DAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAM 284
+A +F++M V ++V++ ++ + + E + F+ ++ + M
Sbjct: 335 EAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCM 394
Query: 285 VSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG 318
V ++G + EA MP + W A++
Sbjct: 395 VDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGA 429
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 107/248 (43%), Gaps = 20/248 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D+ WN+ I ++ +G A +F+ M R VS+ +I+GY+ G A +F +
Sbjct: 180 DQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHE 239
Query: 118 M----PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGY 169
M P + + ++ +L R + + K ++ ++L YA+ G
Sbjct: 240 MLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGE 299
Query: 170 ADAARRIF--DRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLM 223
D A ++F + L+ WN ++ Y +G+ +EA LFE K + V++ +L+
Sbjct: 300 IDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALL 359
Query: 224 GGFVKQKRLGDAKWIFDRMP----VRDEVS-WNTMITGYAQNNYLAEAQRLFEEAPV-KD 277
K + + + F M + E+ + M+ ++ L EA+ P+ D
Sbjct: 360 NACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD 419
Query: 278 VFTWTAMV 285
W A++
Sbjct: 420 ATIWGALL 427
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/639 (36%), Positives = 359/639 (56%), Gaps = 50/639 (7%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----V 244
N L+ AY++ G + A +F+ + +V+WNS++ +++ R +A I+ RM +
Sbjct: 114 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 173
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARM 299
DE +++++ ++ + E QR ++ V +VF +A+V Y + GK+ +AR+
Sbjct: 174 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----------------CKN--- 339
+ D + K+ V + A+I GY + ++F MT C N
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293
Query: 340 -------------------VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
VAS +++T Y + G + + +F + + ++W ++I G
Sbjct: 294 LTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVG 353
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Q+G E +L F +M R N +SVL C++LA LE GKQ+H ++K G +
Sbjct: 354 LVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDID 413
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+VG AL+ Y KCGS E A F +++ DV+S N+MI YA++GFG +AL LF MK
Sbjct: 414 KYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD 473
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G++P+++T +G+LSAC++ GL+E+G F S + HY CMVDLLGRAGRL
Sbjct: 474 TGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLK 533
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA+ L+ + D W LL ACR++G E+A++ + ++ PE+ G +VLLSNLYA
Sbjct: 534 EAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYA 592
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
++G W V +++ MR+ +KK SW++V+ ++HTF GD HP I LEEL
Sbjct: 593 STGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIE 652
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI-LSIPAGRPIRVMKNLRVCE 739
K+K+ G+V T+ VL D+ EE+K L YHSEKLAVA+ + S IR++KNLRVC
Sbjct: 653 KVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCG 712
Query: 740 DCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH +K +SKIVGR II RD RFHHF G CSCGDYW
Sbjct: 713 DCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 205/476 (43%), Gaps = 73/476 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE-MMPK--- 151
N +I YL G + AR+VFD++P R +V+WN MI+ Y+RN A ++++ M+P
Sbjct: 114 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 173
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRML-----EKNEISWNGLLAAYVQNGRIEEACM 206
D +++++ ++ G +R + + N + L+ Y + G++ +A +
Sbjct: 174 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNY 262
+ + +VV + +L+ G+ G++ +F M + +E + ++++
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293
Query: 263 LAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
L RL VK V + T++++ Y + G VD++ +F N V+W ++I
Sbjct: 294 LTSG-RLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIV 352
Query: 318 GYVQTKRMDMARELFEAM-----------------TCKNVASWN---------------- 344
G VQ R ++A F M C ++A
Sbjct: 353 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDI 412
Query: 345 ------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+I Y + G AR++F+ + + D +S ++I YAQ+G+ ++L+LF MK
Sbjct: 413 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 472
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQL------HGQLVKVGFEAGCFVGNALLVMYC 452
G N + VLS C N LE G + G + C V +
Sbjct: 473 DTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVD-----LLG 527
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDD 507
+ G ++EA ++ DV+ W T+++ HG D M M + + + P+D
Sbjct: 528 RAGRLKEAEMLINQVNISDVVIWRTLLSACRIHG---DVEMAKRVMNRVIDLAPED 580
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
++S++ C + S+ ++ +K GF +GN L+ Y KCGSV A F+E+
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVP 137
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
+ +++WN+MIA Y R+G K+A+ +++ M GI PD+ T + A S GLV +G +
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG-Q 196
Query: 529 YFYSMNRDYGV-IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ + GV + N + +VD+ + G++ +A+ L+ + D + AL+
Sbjct: 197 RAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR-LVSDQVVGKDVVLFTALI 250
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 316/541 (58%), Gaps = 30/541 (5%)
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEA----QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA 297
MP VSW +I Y + EA +R F D FT +++ + ++
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
++ A ++ V+ + +V T +D+ Y + GE+
Sbjct: 61 EAVWAAARQEEGVAESV----FVATAALDL----------------------YVKCGEME 94
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR++FD M D ++W A++ GYA +G+ ++L LF M+ G + + LS C
Sbjct: 95 KARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACT 154
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
L +L+LG+Q G + +G AL+ MY KCGS EA+ F++++++D+I WN
Sbjct: 155 RLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNA 214
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
MI G G K A L MK G+K +D T +G+L +C+HTGLV G +YF++M Y
Sbjct: 215 MILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVY 274
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ P +HY CMVDL RAG L+EA L+ +MP +A WGALLG C+++ +LAE A
Sbjct: 275 RISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHA 334
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
+ + +EP N+G YV+LSN+Y+ SGRW D +K+RL+M+ +G++KV SW+E+ KVH
Sbjct: 335 LKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHK 394
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F VGD HP D+IYA L+EL ++K G+ +T++V+ DV EEKE+ L +HSEK+A+A
Sbjct: 395 FYVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIA 454
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+ +++ G IRV KNLRVC DCH+AIK IS+I R I++RDNNRFH F G CSC DY
Sbjct: 455 FSLITTEPGETIRVTKNLRVCTDCHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDY 514
Query: 778 W 778
W
Sbjct: 515 W 515
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 145/361 (40%), Gaps = 60/361 (16%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYA----DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
MP VSW +++ Y G+A ARR F + + + +L A + +E
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 205 CMLFESKANWEVVSWNSLMGG-----FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
++ + E V+ + + +VK + A+ +FD M RD V+W M+ GYA
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 260 NNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEAR----MIFDAMPEKNTVS 311
N + EA LF E D +T +S + G +D R M+ N V
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
A+I Y + A +F+ M +++ WN MI G +G H+
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTG--------------HEK 226
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
I++A L +MK+ G +LN + F +L +C + + G+Q
Sbjct: 227 IAFA-----------------LVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHN 269
Query: 432 LVKVGFEA------GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYAR 484
+ V + GC V ++ + G +EEA+ ++ + + + W ++ G
Sbjct: 270 MTHVYRISPRIEHYGCMVD-----LFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKI 324
Query: 485 H 485
H
Sbjct: 325 H 325
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 142/355 (40%), Gaps = 54/355 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
A + Y+ G+++ AR VFD+M RD V+W M+ GY N A +LF M K
Sbjct: 81 TAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAK 140
Query: 152 RDVVSWNTMLSGYAQNGYADAARRI-----FDRMLEKNEISWNGLLAAYVQNGRIEEACM 206
D + LS + G D R+ +D +L N + L+ Y + G EA M
Sbjct: 141 PDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVL-GNPVLGTALIDMYAKCGSTSEAWM 199
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI--------TGY 257
+F+ +++ WN+++ G A + +M +++ NT I TG
Sbjct: 200 VFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGL 259
Query: 258 AQN--NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE-KNTVSWNA 314
+ Y ++ +P + + MV + + G ++EA + MP N V W A
Sbjct: 260 VNDGRQYFHNMTHVYRISP--RIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGA 317
Query: 315 MIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISW 374
++ G + D+A + + + WN SG N+
Sbjct: 318 LLGGCKIHRNADLAEHALKQLI--RLEPWN--------SGNYVMLSNI------------ 355
Query: 375 AAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
Y+ SG ED+ +L +EMK G + + P +S + + +G H
Sbjct: 356 ------YSNSGRWEDAAKLRLEMKAKG--IEKVPASSWVELDGKVHKFYVGDDSH 402
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 95/241 (39%), Gaps = 49/241 (20%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD-- 122
A+ +++ G + A VF+ M R +V++ AM+ GY NG A +F M
Sbjct: 81 TAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAK 140
Query: 123 ---------------------------LVSWN----------VMISGYVRNKSLSAARNL 145
+V W+ +I Y + S S A +
Sbjct: 141 PDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMV 200
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F+ M +RD++ WN M+ G G+ A + +M ++ N+ ++ GLL + G +
Sbjct: 201 FQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLV 260
Query: 202 EEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMIT 255
+ F + + +S + ++ F + L +A + MP + + V W ++
Sbjct: 261 NDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLG 320
Query: 256 G 256
G
Sbjct: 321 G 321
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/607 (35%), Positives = 333/607 (54%), Gaps = 50/607 (8%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----------- 270
LM + K + A+ +FD +P R+ + N MI Y N + E ++F
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 271 ----------------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFD 302
+ +F +VS Y + G + EAR++ D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMD----MARELFEAMTCKNVASWNTMITGYAQSG--EI 356
M ++ VSWN+++ GY Q +R D + RE+ + + +++ + + +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+ +++F +M + +SW +I Y ++ +++ L+ M+ G + TSVL C
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
+ ++L LGK++HG + + + NAL+ MY KCG +E+A FE + +DV+SW
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
MI+ Y G G DA+ LF ++ G+ PD I V L+ACSH GL+E+G F M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
Y + P +H CMVDLLGRAG++ EA +++M EP+ WGALLGACR++ T++
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
AA+ +F++ PE +G YVLLSN+YA +GRW +V+ +R M+ +G+KK G S +EV +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
TF VGD HP+ D IY L+ L K+K+ G+V ++ LHDV EE+KE L HSEKLA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 717 AYGILSIP-----AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
+ +++ + IR+ KNLR+C DCH A K IS+I R II+RD NRFH F G
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 679
Query: 772 CSCGDYW 778
CSCGDYW
Sbjct: 680 CSCGDYW 686
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 178/385 (46%), Gaps = 33/385 (8%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQ 166
AR+VFD++P+R+++ NVMI YV N +F M + D ++ +L +
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 167 NGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
+G R+I L NGL++ Y + G + EA ++ + + +VVSWNSL
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 223 MGGFVKQKRLGDAKWIFDRM-PVRDEVSWNTMITGY-AQNNYLAE----AQRLFEEAPVK 276
+ G+ + +R DA + M V+ TM + A +N E + +F + K
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELF 332
+ +W M+ Y++N EA ++ M E + VS +++ T + + +++
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 333 EAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+ K N+ N +I YA+ G + AR++F+ M D +SW A+I+ Y SG
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL------HGQLVKVGFEAGCF 442
D++ LF +++ G + F + L+ C++ LE G+ H ++ C
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452
Query: 443 VGNALLVMYCKCGSVEEAYHAFEEI 467
V + + G V+EAY +++
Sbjct: 453 VD-----LLGRAGKVKEAYRFIQDM 472
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 150/342 (43%), Gaps = 26/342 (7%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGYV 134
SA VF+ +P R+ + N MI Y+ NG +VF M + D ++ ++
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 135 RNKSLSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
+ ++ R + K + S N ++S Y + G+ AR + D M ++ +SWN
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 191 LLAAYVQNGRIEEA---CMLFES-KANWEVVSWNSLMGGF--VKQKRLGDAKWIFDRMPV 244
L+ Y QN R ++A C ES K + + + SL+ + + K +F +M
Sbjct: 212 LVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK 271
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKVDEARMI 300
+ VSWN MI Y +N EA L+ D + T+++ + + I
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Query: 301 FDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEI 356
+ K N + NA+I Y + ++ AR++FE M ++V SW MI+ Y SG
Sbjct: 332 HGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRG 391
Query: 357 THARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLF 394
A LF ++ D I++ +A + +G E+ F
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 433
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 193/429 (44%), Gaps = 39/429 (9%)
Query: 65 NVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
NV I +++ NG + VF +M R ++ ++ +G + R++ +
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 121 RDLVSW----NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
L S N ++S Y + LS AR + + M +RDVVSWN+++ GYAQN D A +
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 177 FDRMLEKNEISWN-GLLAAY---VQNGRIEEACM---LFESKANWEVVSWNSLMGGFVKQ 229
R +E +IS + G +A+ V N E +F +VSWN ++G ++K
Sbjct: 229 C-REMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 230 KRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTW 281
+A ++ RM D VS +++ + L+ +++ + + ++
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT----C 337
A++ Y + G +++AR +F+ M ++ VSW AMI+ Y + R A LF +
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLR 392
+ ++ T + + +G + R+ F M H I+ A ++ ++G +++ R
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE-AGCFVGNALLVMY 451
+M N + ++L C + ++G +L ++ E +G +V L +Y
Sbjct: 468 FIQDMSM---EPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYV--LLSNIY 522
Query: 452 CKCGSVEEA 460
K G EE
Sbjct: 523 AKAGRWEEV 531
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 8/194 (4%)
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
VL T ++ +L + +H +++ +G L+ Y V A F+EI +++
Sbjct: 48 VLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
VI N MI Y +GF + + +F +M ++PD T +L ACS +G + G +
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
S + G+ +V + G+ G L EA+ ++ M D +W +L+ Y +
Sbjct: 165 SATK-VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVG---YAQN 219
Query: 592 ELAEKAAEVIFEME 605
+ + A EV EME
Sbjct: 220 QRFDDALEVCREME 233
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPAR 112
G + WNV I +M+N A+ +++ M +VS +++ L +
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 113 QVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
++ + ++ L+ N +I Y + L AR++FE M RDVVSW M+S Y +G
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 169 YADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
A +F ++ L + I++ LAA G +EE F+
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFK 434
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/437 (45%), Positives = 292/437 (66%), Gaps = 2/437 (0%)
Query: 344 NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
++ Y + G++ A +F + D ++W+A++AGYAQ+G +E ++++F E+ + G +
Sbjct: 36 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 95
Query: 404 LNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
N F+S+L+ CA AS+ GKQ HG +K ++ V +ALL MY K G++E A
Sbjct: 96 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 155
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+ +KD++SWN+MI+GYA+HG AL +F+ MK +K D +T +G+ +AC+H GL
Sbjct: 156 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 215
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
VE+G +YF M RD + P +H +CMVDL RAG+L++A +++NMP + W +L
Sbjct: 216 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 275
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
ACR++ KTEL AAE I M+PE++ YVLLSN+YA SG W + +KVR M +R VKK
Sbjct: 276 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 335
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
GYSW+EV+NK ++F GD HP KD+IY LE+L +LK G+ T VL D+ +E
Sbjct: 336 EPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEH 395
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE +L HSE+LA+A+G+++ P G P+ ++KNLRVC DCH IK I+KI R I++RD+N
Sbjct: 396 KEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSN 455
Query: 763 RFHHFSG-GSCSCGDYW 778
RFHHFS G CSCGD+W
Sbjct: 456 RFHHFSSDGVCSCGDFW 472
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 44/276 (15%)
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV- 340
TA++ YV+ GKV+EA +F + +K+ V+W+AM+AGY QT + A ++F +T +
Sbjct: 36 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 95
Query: 341 -------------ASWNT--------------------------MITGYAQSGEITHARN 361
A+ N ++T YA+ G I A
Sbjct: 96 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 155
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+F R + D +SW ++I+GYAQ G + +L +F EMK+ +++ F V + C +
Sbjct: 156 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 215
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLV-MYCKCGSVEEAYHAFEEIVD-KDVISWNTMI 479
+E G++ +V+ A N+ +V +Y + G +E+A E + + W T++
Sbjct: 216 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 275
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
A H K L + K + +KP+D +LS
Sbjct: 276 AACRVH--KKTELGRLAAEKIIAMKPEDSAAYVLLS 309
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 5/205 (2%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
++H Q+VK +E VG ALL Y K G VEEA F I DKD+++W+ M+AGYA+ G
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+ A+ +F + GIKP++ T IL+ C+ T + F+ + +
Sbjct: 78 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 137
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
+ ++ + + G ++ A+ + K E D +W +++ +G+ A KA +V EM+
Sbjct: 138 SALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ---AMKALDVFKEMKK 193
Query: 607 ENAGMY-VLLSNLYAASGRWGDVSK 630
M V ++AA G V +
Sbjct: 194 RKVKMDGVTFIGVFAACTHAGLVEE 218
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 38/296 (12%)
Query: 90 RSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
RSS A++ Y+ G+++ A +VF + +D+V+W+ M++GY + AA +F +
Sbjct: 30 RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL 89
Query: 150 PKRDV----VSWNTMLS-----------GYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
K + +++++L+ G +G+A +R L+ + + LL
Sbjct: 90 TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR------LDSSLCVSSALLTM 143
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSW 250
Y + G IE A +F+ + ++VSWNS++ G+ + + A +F M R D V++
Sbjct: 144 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 203
Query: 251 NTMITGYAQNNYLAEAQRLFE-------EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
+ + E ++ F+ AP K+ + MV Y + G++++A + +
Sbjct: 204 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE--HNSCMVDLYSRAGQLEKAMKVIEN 261
Query: 304 MPE-KNTVSWNAMIAGYVQTKRMDMAR---ELFEAMTCKNVASWNTMITGYAQSGE 355
MP + W ++A K+ ++ R E AM ++ A++ + YA+SG+
Sbjct: 262 MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 317
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 143/316 (45%), Gaps = 26/316 (8%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
+Y+ +++ + + QV +R ++ YV+ + A +F + +D
Sbjct: 3 TYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 62
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLL-AAYVQNGRIEEACML- 207
+V+W+ ML+GYAQ G +AA ++F + ++ NE +++ +L N + +
Sbjct: 63 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 122
Query: 208 ---FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+S+ + + ++L+ + K+ + A+ +F R +D VSWN+MI+GYAQ+
Sbjct: 123 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 182
Query: 265 EAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVSWN 313
+A +F+E + V T+ + + G V+E FD M P K S
Sbjct: 183 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS-- 240
Query: 314 AMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGYAQSGEITHARNLFDR---MPQH 369
M+ Y + +++ A ++ E M ++ W T++ + R ++ M
Sbjct: 241 CMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPE 300
Query: 370 DCISWAAIIAGYAQSG 385
D ++ + YA+SG
Sbjct: 301 DSAAYVLLSNMYAESG 316
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 32/151 (21%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+T + + G +SA VF + VS+N+MISGY +GQ A VF +M +R +
Sbjct: 141 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV---- 196
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
K D V++ + + G + + FD M+ +I+
Sbjct: 197 -----------------------KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 233
Query: 188 WNG-----LLAAYVQNGRIEEACMLFESKAN 213
++ Y + G++E+A + E+ N
Sbjct: 234 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 264
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 335/556 (60%), Gaps = 10/556 (1%)
Query: 232 LGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA-----QRLFEEAPVKDVFTWTAMVS 286
L A+ +FDR+ + WNTMI GY+ + EA L+ P + +T+ ++
Sbjct: 68 LAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVP-HNAYTFPFLLK 126
Query: 287 GYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS 342
+E + I + + + N+++ Y ++ + AR LF+ + ++ S
Sbjct: 127 ACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVS 186
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
WN+MI GY + GEI A +F+ MP+ + ISW ++I+G +G +++L LF M+ G
Sbjct: 187 WNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGI 246
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+L+ S L CA+L L+ GK +H + K E +G L+ MY KCG +EEA
Sbjct: 247 KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIE 306
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F ++ +K V W MI+GYA HG G++AL F M+T G++P+ +T GIL+ACSH GL
Sbjct: 307 VFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 366
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
V + F SM R +G P+ +HY CMVDLLGRAG L EA+ L++NMP +P+AA WGALL
Sbjct: 367 VHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
AC ++G EL ++ +++ +++P + G Y+ L++++AA+G W ++VR +M+++GV K
Sbjct: 427 NACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSK 486
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
+ G S + V H F GD HP+ I LE++ +L+++G+ +L D+ ++E
Sbjct: 487 LPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKE 546
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
KE + +HSEKLAV +G++S G IR++KNLRVCEDCH IK ISK+ R I++RD
Sbjct: 547 KETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRT 606
Query: 763 RFHHFSGGSCSCGDYW 778
RFH F G+C+CGDYW
Sbjct: 607 RFHLFKDGNCTCGDYW 622
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 67/448 (14%)
Query: 104 LNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
++GQ+ + D++P L+++ + SL+ AR +F+ + + + WNTM+ G
Sbjct: 37 IHGQMLKTGLILDEIPASKLLAF----CASPNSGSLAYARTVFDRIFRPNTFMWNTMIRG 92
Query: 164 YAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
Y+ + + A ++ ML N ++ LL A EE + + E
Sbjct: 93 YSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSE 152
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
+ + NSL+ + K + A+ +FD++ RD VSWN+MI GY + + A +F P
Sbjct: 153 IYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPE 212
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT----KRMDMAR-- 329
+++ +WT+M+SG V GK EA +F M N + +Q +D +
Sbjct: 213 RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 272
Query: 330 ---------ELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
E+ + C +I YA+ G++ A +F +M + W A+I+G
Sbjct: 273 HAYIKKHEIEIDPILGC-------VLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISG 325
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
YA G ++L F++M+ G N+ FT +L+ C++ + K L FE+
Sbjct: 326 YAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLL--------FES- 376
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
E H F+ ++ + M+ R G K+A L E+M
Sbjct: 377 -----------------MERIHGFKPSIEH----YGCMVDLLGRAGLLKEAEELIENMP- 414
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTE 528
+KP+ +L+AC G +E G +
Sbjct: 415 --VKPNAAIWGALLNACHIHGNLELGKQ 440
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 137/269 (50%), Gaps = 33/269 (12%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
SG + +AR +FDR+ + + W +I GY+ S E++L L+ M + N F +
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L C+++++ E +Q+H ++K+GF + + N+LL +Y K G ++ A F+++ +D
Sbjct: 125 LKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 473 ISWNTMIAGYAR-------------------------------HGFGKDALMLFESMKTV 501
+SWN+MI GY + G K+AL LF M+T
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
GIK D++ +V L AC+ G++++G ++ ++ + + + + ++D+ + G L+E
Sbjct: 245 GIKLDNVALVSTLQACADLGVLDQG-KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEE 303
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGK 590
A + + M E + W A++ ++G+
Sbjct: 304 AIEVFRKME-EKGVSVWTAMISGYAIHGR 331
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 165/366 (45%), Gaps = 29/366 (7%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
+ N++++ Y +G + AR +FDQ+ QRD VSWN MI GY + + A +F MP+R+
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERN 214
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
++SW +M+SG G A +F RM ++ + ++ L A G +++ +
Sbjct: 215 IISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHA 274
Query: 210 SKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE 265
E+ + L+ + K L +A +F +M + W MI+GYA + E
Sbjct: 275 YIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGRE 334
Query: 266 AQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMP-----EKNTVSWNAMI 316
A F + V T+T +++ G V EA+++F++M + + + M+
Sbjct: 335 ALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMV 394
Query: 317 AGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHDC---- 371
+ + A EL E M K N A W ++ G + + + + Q D
Sbjct: 395 DLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGG 454
Query: 372 --ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
I A+I +A +G + R+ +MK G +++ P SV+S G + H
Sbjct: 455 RYIHLASI---HAAAGEWNQAARVRRQMKEQG--VSKLPGCSVISVNGTAHEFLAGDESH 509
Query: 430 GQLVKV 435
Q+ ++
Sbjct: 510 PQIKEI 515
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 152/353 (43%), Gaps = 57/353 (16%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM-----PQR---------------- 121
VF+ + R ++ +N MI GY + + + A ++ M P
Sbjct: 74 VFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA 133
Query: 122 ------------------DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
++ + N +++ Y ++ + +AR LF+ + +RD VSWN+M+ G
Sbjct: 134 SEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG 193
Query: 164 YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSW 219
Y + G + A IF+ M E+N ISW +++ V G+ +EA LF + + V+
Sbjct: 194 YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVAL 253
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
S + L KWI + D + +I YA+ L EA +F +
Sbjct: 254 VSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEE 313
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMAREL 331
K V WTAM+SGY +G+ EA F M E N +++ ++ + A+ L
Sbjct: 314 KGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLL 373
Query: 332 FEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
FE+M ++ + M+ ++G + A L + MP + + W A++
Sbjct: 374 FESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 18/243 (7%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC---KCGSVEEAY 461
N + +L C+N+ L +Q+HGQ++K G + LL +C GS+ A
Sbjct: 17 NAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLA-FCASPNSGSLAYAR 72
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ I + WNTMI GY+ ++AL+L+ M + + T +L ACS
Sbjct: 73 TVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMS 132
Query: 522 LVEKGTE-YFYSMNRDYGVIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
E+ + + + + +G S+ YT ++++ ++G + A+ L + + D +W
Sbjct: 133 ASEETQQIHAHIIKMGFG----SEIYTTNSLLNVYSKSGDIKSARLLFDQVD-QRDTVSW 187
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
+++ Y K E A E+ M N + + + +G+ + + +M+
Sbjct: 188 NSMIDG---YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244
Query: 639 GVK 641
G+K
Sbjct: 245 GIK 247
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/736 (34%), Positives = 393/736 (53%), Gaps = 67/736 (9%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE----MMPKRDVVSWNTML 161
G A ++FD+M + ++V++N +ISGYV+ +L LF+ + K D + L
Sbjct: 15 GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGAL 74
Query: 162 SGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVV 217
+ +Q+G A + I +L + N L+ Y + G+++ A +LF+ + V
Sbjct: 75 TACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGV 134
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN------NYLAEAQRLFE 271
SWNSL+ G+V+ + + I +M ++ +++NT G A N +
Sbjct: 135 SWNSLIAGYVQNGKYEELLTILQKMH-QNGLAFNTYTLGSALKACSSNFNGCKMFGTMLH 193
Query: 272 EAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMD 326
+ +K DV TA++ Y + G +D+A IFD M +KN V +NAM+AG +Q + ++
Sbjct: 194 DHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 253
Query: 327 -----MARELF----------------------------------EAMTCKNVASWN--- 344
A LF A+ CKN +
Sbjct: 254 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYI 313
Query: 345 --TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
+I Y+ G + A F+ + + A+I GY Q+G E +L LF E+ Y E
Sbjct: 314 GSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEE 373
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ + F++++S+CAN+ L G+Q+ G KVG N+ + MY K G + A
Sbjct: 374 KPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 433
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F+++ + D++SW+TMI A+HG +AL FE MK+ GI+P+ +G+L ACSH GL
Sbjct: 434 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 493
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
VE+G YF +M +DY + + KH C+VDLLGRAGRL +A++L+ + FE + W ALL
Sbjct: 494 VEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALL 553
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK 642
ACR++ T A++ A+ + E+EP + YVLL N+Y +G SKVR M +R +KK
Sbjct: 554 SACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKK 613
Query: 643 VTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE 702
G SW+++ +KV++F GD H +IYA L+E+ K+ + S K +L E E
Sbjct: 614 EPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKR---LDSAKDILGYKIEHE 670
Query: 703 KEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNN 762
+ YHSEKLAVA+G+L + P+RVMKNLR+C DCH +K S + R +I+RD+
Sbjct: 671 HLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSV 730
Query: 763 RFHHFSGGSCSCGDYW 778
RFHHF GSCSCGDYW
Sbjct: 731 RFHHFKDGSCSCGDYW 746
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 170/392 (43%), Gaps = 62/392 (15%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR--- 152
N++I Y GQ+D AR +FD + D VSWN +I+GYV+N + + M +
Sbjct: 106 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA 165
Query: 153 --------------------------------------DVVSWNTMLSGYAQNGYADAAR 174
DVV +L YA+ G D A
Sbjct: 166 FNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAI 225
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEAC------MLFESKA---NWEVVSWNSLMGG 225
+IFD+M++KN + +N ++A +Q IE+ C + FE K+ + +++SL+
Sbjct: 226 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKA 285
Query: 226 FVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
+ + AK + M + DE + +I Y+ + +A F +
Sbjct: 286 CIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPM 345
Query: 282 TAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
TAM+ GY+QNG+ + A +F + + + ++ +++ + ++ T
Sbjct: 346 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATK 405
Query: 338 KNVASW----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
++ + N+ I YA+SG++ A F +M D +SW+ +I AQ G++ ++LR
Sbjct: 406 VGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRF 465
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
F MK G N F VL C++ +E G
Sbjct: 466 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEG 497
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 7/192 (3%)
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
CKCG A F+++ +++++N++I+GY + ++LF+ + +G+K D
Sbjct: 12 CKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G L+ACS +G + G + + + YG+ ++D+ + G++D A+ L +
Sbjct: 72 GALTACSQSGNLSAG-KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSD- 129
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM--YVLLSNLYAASGRWGDVS 629
+ D +W +L+ GK E+ ++ +M Y L S L A S +
Sbjct: 130 KLDGVSWNSLIAGYVQNGKY---EELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCK 186
Query: 630 KVRLKMRDRGVK 641
+ D +K
Sbjct: 187 MFGTMLHDHAIK 198
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 256/760 (33%), Positives = 401/760 (52%), Gaps = 67/760 (8%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ + R N +++ Y G A ++FD+M + ++V++N +ISGYV+ +L
Sbjct: 84 HMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDK 143
Query: 142 ARNLFE----MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLA 193
LF+ + K D + L+ +Q+G A + I +L + N L+
Sbjct: 144 VMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLID 203
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
Y + G+++ A +LF+ + VSWNSL+ G+V+ + + I +M ++ +++NT
Sbjct: 204 MYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMH-QNGLAFNTY 262
Query: 254 ITGYAQN------NYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFD 302
G A N + + +K DV TA++ Y + G +D+A IFD
Sbjct: 263 TLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFD 322
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMD-----MARELF------------------------- 332
M +KN V +NAM+AG +Q + ++ A LF
Sbjct: 323 QMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIV 382
Query: 333 ---------EAMTCKNVASWN-----TMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
A+ CKN + +I Y+ G + A F+ + + A+I
Sbjct: 383 EDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMI 442
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
GY Q+G E +L LF E+ Y E+ + ++++S+CAN+ L G+Q+ G KVG
Sbjct: 443 XGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGIS 502
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
N+ + MY K G + A F+++ + D++SW+TMI A+HG +AL FE M
Sbjct: 503 RFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELM 562
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
K+ GI+P+ +G+L ACSH GLVE+G YF +M +DY + + KH C+VDLLGRAGR
Sbjct: 563 KSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGR 622
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
L +A++L+ + FE + W ALL ACR++ T A++ A+ + E+EP + YVLL N+
Sbjct: 623 LADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNI 682
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
Y +G SKVR M +R +KK G SW+++ +KV++F GD H +IYA L+E+
Sbjct: 683 YMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEM 742
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K+ + S K +L E E + YHSEKLAVA+G+L + P+RVMKNLR+C
Sbjct: 743 LATTKR---LDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRIC 799
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH +K S + R +I+RD+ RFHHF GSCSCGDYW
Sbjct: 800 LDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 7/240 (2%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L + ++ + L GK +H ++K F F+ N LL MYCKCG A
Sbjct: 57 LESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKL 116
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F+++ +++++N++I+GY + ++LF+ + +G+K D T G L+ACS +G +
Sbjct: 117 FDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNL 176
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
G + + + YG+ ++D+ + G++D A+ L + + D +W +L+
Sbjct: 177 SAG-KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSD-KLDGVSWNSLIA 234
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGM--YVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
GK E+ ++ +M Y L S L A S + + D +K
Sbjct: 235 GYVQNGKY---EELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIK 291
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 49/243 (20%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF------DQMP-------------- 119
AL FNS+ + V AMI GYL NG+ + A +F ++ P
Sbjct: 423 ALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCAN 482
Query: 120 -------------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
R + N I Y ++ L AA F+ M D+VSW+TM
Sbjct: 483 MGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTM 542
Query: 161 LSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFES-----K 211
+ AQ+G+A A R F+ M +E N ++ G+L A G +EE F++ K
Sbjct: 543 ICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYK 602
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE-VSWNTMITGYAQNNYLAEAQRLF 270
V ++ + RL DA+ + R+ E V W +++ + AQR+
Sbjct: 603 MKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVA 662
Query: 271 EEA 273
++
Sbjct: 663 QKV 665
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/654 (35%), Positives = 363/654 (55%), Gaps = 41/654 (6%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYA--QNGYADAARRIF--DRMLEKNEISWNGLLAA 194
L+ AR LF M D NTM+ GYA QN Y + F +R + + ++ +LAA
Sbjct: 61 LNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAA 120
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
+ G ++ + + EV L GF D N +I
Sbjct: 121 CARLGAVK-----LGRRFHCEV-----LKNGFGS-----------------DLFVINALI 153
Query: 255 TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE-----KNT 309
Y A +F+E+ V+DV TW M++ ++ G ++A + D M + +
Sbjct: 154 QFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDE 213
Query: 310 VSWNAMIAGYVQTKRMDMARELF----EAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
V+ +++ Q ++ + L E +N+ N ++ Y + +I A+ +F+R
Sbjct: 214 VTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNR 273
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
+ + D +SW ++++G A+SGY +++L LF +M+ L+ VLS CA +L+ G
Sbjct: 274 IREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQG 333
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
K +H + K + AL+ MY KCGS++ A F + ++V +WN +I G A H
Sbjct: 334 KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMH 393
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G G+DA+ LF+ M+ + PDD+T + +L ACSH GLV++G F +M + + P +H
Sbjct: 394 GHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEH 453
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y C+VDLL RA ++D+A ++NMP + ++ W LLGACR G +LAEK + E+E
Sbjct: 454 YGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELE 513
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
P++ G YV+LSNLYA +W K+R +M+++G++K G SW+E+ +H F GD H
Sbjct: 514 PDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSH 573
Query: 666 PEKDRIYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
+ ++IYA +EE+ ++ D G V T VL D+ EEEKEH L HSEKLA+A G++S P
Sbjct: 574 LQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTP 633
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+G PIR++KNLRVC DCH+ +K SK+ R I+ RD +RFHHF GSCSC D+W
Sbjct: 634 SGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 130/233 (55%), Gaps = 3/233 (1%)
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ SG++ +AR LF +M D +I GYA+S +++ L+ M G ++ +
Sbjct: 56 SHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYP 115
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
VL+ CA L +++LG++ H +++K GF + FV NAL+ Y CGS A F+E +
Sbjct: 116 FVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVR 175
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
DV++WN MI + G + A L + M K ++PD++TMV ++ AC+ G +E+G ++
Sbjct: 176 DVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG-KF 234
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+S +++ G+ N + ++D+ + ++ AQ + N E D +W ++L
Sbjct: 235 LHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVF-NRIREKDVLSWTSML 286
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 145/298 (48%), Gaps = 21/298 (7%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
DL N +I Y S A ++F+ RDVV+WN M++ + G ++ A + D M
Sbjct: 145 DLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMT 204
Query: 181 ----LEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRL 232
L +E++ L+ A Q G +E L E + + N+++ + K +
Sbjct: 205 KLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDI 264
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGY 288
A+ +F+R+ +D +SW +M++G A++ Y EA LF++ + D T ++S
Sbjct: 265 ESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSAC 324
Query: 289 VQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN 344
Q G +D+ + I + + + V A++ Y + +D+A ++F M +NV +WN
Sbjct: 325 AQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWN 384
Query: 345 TMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+I G A G A +LFD+M D +++ A++ + +G ++ L +F MK
Sbjct: 385 ALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMK 442
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 202/470 (42%), Gaps = 82/470 (17%)
Query: 90 RSSVSYNAMISGYLLN-------GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
R+ + +N + S L++ G L+ AR++F QM D N MI GY R+++ A
Sbjct: 36 RTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEA 95
Query: 143 RNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAA 194
+L+ M +R D ++ +L+ A+ G RR +L+ + N L+
Sbjct: 96 VSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQF 155
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP----VR-DEVS 249
Y G AC +F+ +VV+WN ++ + + A + D M +R DEV+
Sbjct: 156 YHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVT 215
Query: 250 WNTMITGYAQ-------------------------NNYLAE----------AQRLFEEAP 274
+++ AQ NN + + AQ +F
Sbjct: 216 MVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIR 275
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
KDV +WT+M+SG ++G EA +F M E + ++ +++ QT +D +
Sbjct: 276 EKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKY 335
Query: 331 L------FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ FE + C V ++ YA+ G I A +F RM + +W A+I G A
Sbjct: 336 IHLLIDKFE-INCDLVLE-TALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMH 393
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA----- 439
G+ ED++ LF +M+ + F ++L C++ ++ G + Q +K F+
Sbjct: 394 GHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF-QAMKNKFQIEPRME 452
Query: 440 --GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
GC V + C+ V++A E + + + + W T++ G R G
Sbjct: 453 HYGCVVD-----LLCRARKVDDALAFIENMPIKANSVLWATLL-GACRSG 496
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 175/382 (45%), Gaps = 32/382 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP-----RRSSVSYNAMISGYLLNGQLDPARQV 114
D+ WN+ I H+ G + A + + M R V+ +++ G L+ + +
Sbjct: 176 DVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFL 235
Query: 115 FDQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ +L N ++ Y + + +A+ +F + ++DV+SW +MLSG A++GY
Sbjct: 236 HSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYF 295
Query: 171 DAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSL 222
A +F +M +E +EI+ G+L+A Q G +++ ++ + + N ++V +L
Sbjct: 296 QEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETAL 355
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDV 278
+ + K + A +F RM VR+ +WN +I G A + + +A LF++ + D
Sbjct: 356 VDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 415
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFE 333
T+ A++ G VDE +F AM K + + ++ + +++D A E
Sbjct: 416 VTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIE 475
Query: 334 AMTCK-NVASWNTMITGYAQSGEITHARNLFDRMPQHD---CISWAAIIAGYAQSGYSED 389
M K N W T++ G A + R+ + + C + + YA +
Sbjct: 476 NMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDH 535
Query: 390 SLRLFIEMKRYGERLNRSPFTS 411
+L+L +MK G + ++P S
Sbjct: 536 ALKLRKQMKNKG--IEKTPGCS 555
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 153/350 (43%), Gaps = 60/350 (17%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS-AARNLFEMMPKRD- 153
NA+I Y G A VFD+ RD+V+WN+MI+ ++ NK LS A +L + M K D
Sbjct: 150 NALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHL-NKGLSEKAFDLLDEMTKLDN 208
Query: 154 -------VVSW--------------------------------NTMLSGYAQNGYADAAR 174
+VS N +L Y + ++A+
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQ 268
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQK 230
+F+R+ EK+ +SW +L+ ++G +EA LF+ +K + ++ ++ +
Sbjct: 269 EVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTG 328
Query: 231 RLGDAKWI---FDRMPVR-DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS 286
L K+I D+ + D V ++ YA+ + A ++F V++VFTW A++
Sbjct: 329 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIG 388
Query: 287 GYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK---- 338
G +G ++A +FD M + V++ A++ +D +F+AM K
Sbjct: 389 GLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 448
Query: 339 -NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGY 386
+ + ++ ++ ++ A + MP + + + WA ++ G+
Sbjct: 449 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 498
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 135/340 (39%), Gaps = 64/340 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D ++R N + + + +SA VFN + + +S+ +M+SG +G A +F +
Sbjct: 245 DENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQK 304
Query: 118 MPQR---------------------------------------DLVSWNVMISGYVRNKS 138
M DLV ++ Y + S
Sbjct: 305 MQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGS 364
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
+ A +F M R+V +WN ++ G A +G+ + A +FD+M L +++++ LL A
Sbjct: 365 IDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCA 424
Query: 195 YVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G ++E +F++ N + + ++ + +++ DA + MP++ + V
Sbjct: 425 CSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSV 484
Query: 249 SWNTMITGYAQNNY--LAE--AQRLFEEAPVKDVFTWTAMVSG-YVQNGKVDEARMIFDA 303
W T++ + LAE +R+ E P D M+S Y + D A +
Sbjct: 485 LWATLLGACRSGGHFDLAEKIGRRVIELEP--DSCGRYVMLSNLYAGVSQWDHALKLRKQ 542
Query: 304 MPEKNT-----VSW---NAMIAGYVQTKRMDMARELFEAM 335
M K SW N MI +V R + E AM
Sbjct: 543 MKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAM 582
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/565 (36%), Positives = 332/565 (58%), Gaps = 31/565 (5%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW--NTMLSGYAQNGYADAARRIFDR 179
D V+ + ++S Y ++ L A+R +F P ++ NT+L YA N A +F
Sbjct: 55 DPVAASKLLSSYALHRRLPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVFSA 114
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
M ++ +++ L+ A G V ++ VK LG
Sbjct: 115 MPHRDSFTYSFLIKALSSAG----------------VAPLRAVHSHVVK---LGS----- 150
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
+ D N +I Y++N ++A ++FEE P +DV +W + ++ V+ G+V+ AR
Sbjct: 151 ----IEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARR 206
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
+FD M EK+TVSWN ++ GY + ++ A +LF+ M +NV SW+T+++GY + G++ A
Sbjct: 207 MFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMA 266
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
R +FD+MP + ++W +++ AQ+G E++ +LF +MK L+ + S+L+ CA
Sbjct: 267 RVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACAES 326
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE-EIVDKDVISWNTM 478
SL LGK++H + V NAL+ M+CKCG + A + F+ EIV+KD +SWNT+
Sbjct: 327 GSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTI 386
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I G+A HG G AL F MK G PD +TM+ +LSAC+H G VE+G YF +M RDYG
Sbjct: 387 IGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANMERDYG 446
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
V+P +HY CM+DLLGR G + EA +L+K+MP++P+ WG+LL ACRL+ E AE A
Sbjct: 447 VVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAV 506
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ +++P NAG Y +LS++YA +G+W D++K R++M+ G +K +G SW+E+ H F
Sbjct: 507 NELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWIELDEAFHEF 566
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLK 683
+VGD HP+ D+I ++ L K
Sbjct: 567 TVGDRKHPDSDQISEMVDRLSSHAK 591
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 233/502 (46%), Gaps = 70/502 (13%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ---- 120
N + + N A+ VF++MP R S +Y+ +I L + + P R V + +
Sbjct: 93 NTLLRAYALNALPREAVAVFSAMPHRDSFTYSFLIKA-LSSAGVAPLRAVHSHVVKLGSI 151
Query: 121 RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM 180
D N +I Y +N S A +FE MP+RDVVSWN+ ++ + G + ARR+FD M
Sbjct: 152 EDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARRMFDEM 211
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
LEK+ +SWN LL Y + G +EEA LF+ VVSW++++ G+ K+ + A+ IFD
Sbjct: 212 LEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMARVIFD 271
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV-FTWTAMVSGYVQNGKVDEARM 299
+MP ++ V+W M++ AQN + EA +LF + V A+VS
Sbjct: 272 KMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVS------------- 318
Query: 300 IFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
I A E +++ I YV+T+++ ++ N +I + + G I A
Sbjct: 319 ILAACAESGSLALGKRIHRYVRTRQLG-----------RSTHVCNALIDMFCKCGCINRA 367
Query: 360 RNLFD-RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCAN 418
+FD + + D +SW II G+A G+ + +L F +MK G + +VLS C +
Sbjct: 368 DYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTH 427
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+ +E G++ + + G V + H + M
Sbjct: 428 MGFVEEGRRYFANMER------------------DYGVVPQIEH------------YGCM 457
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF-YSMNRDY 537
I R G K+A+ L +SM P+++ +LSAC + K EY ++N
Sbjct: 458 IDLLGRGGLIKEAVDLIKSMP---WDPNEVIWGSLLSACR----LHKNVEYAEIAVNELS 510
Query: 538 GVIP-NSKHYTCMVDLLGRAGR 558
+ P N+ +Y + + AG+
Sbjct: 511 KLQPSNAGNYAVLSSIYAEAGK 532
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 180/368 (48%), Gaps = 26/368 (7%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN A+ +R G + A +F+ M + +VS+N ++ GY G ++ A ++F MP
Sbjct: 184 DVVSWNSAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMP 243
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+R++VSW+ ++SGY + + AR +F+ MP +++V+W M+S AQNG + A ++F +
Sbjct: 244 ERNVVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQ 303
Query: 180 M----LEKNEISWNGLLAAYVQNG------RIEEACMLFESKANWEVVSWNSLMGGFVKQ 229
M +E + + +LAA ++G RI + + V N+L+ F K
Sbjct: 304 MKEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVC--NALIDMFCKC 361
Query: 230 KRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAM 284
+ A ++FD V +D VSWNT+I G+A + + +A F + ++ D T +
Sbjct: 362 GCINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINV 421
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMIAGYVQTKRMDMARELFEAMTC-K 338
+S G V+E R F M V + MI + + A +L ++M
Sbjct: 422 LSACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDP 481
Query: 339 NVASWNTMITGYAQSGEITHAR---NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
N W ++++ + +A N ++ + ++A + + YA++G D + +
Sbjct: 482 NEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARM 541
Query: 396 EMKRYGER 403
+MK G +
Sbjct: 542 QMKGTGSQ 549
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/467 (45%), Positives = 292/467 (62%), Gaps = 1/467 (0%)
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
A+++ Y + AR LF+ M +V S M+T YA G + AR LFD +P+ D I
Sbjct: 158 TALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFI 217
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
W A+I GY Q G ++L+LF M R + VLS A L ++E GK LH +
Sbjct: 218 CWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYV 277
Query: 433 VKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+ V AL+ MYCKCGS+E+A F I +KD++ WN MI GYA HG + A
Sbjct: 278 KNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKA 337
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L +F ++ G+ P DIT +G+L+ACSH+GLVE+G +F SM +YG+ P +HY CMVD
Sbjct: 338 LEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVD 397
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG ++EA +L++++ PDA W +LL ACRL+ L ++ A+ + N+GM
Sbjct: 398 LLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGM 457
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
Y+LLSN+YAA G+W +V++VR M+ G++K G S +E+ KV+ F GD HP D I
Sbjct: 458 YILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEI 517
Query: 672 YAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
YA L+++ +K+ G V T+LVLHD+ E KE L HSEKLAVA+G++S G I++
Sbjct: 518 YAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKI 577
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLR C DCH +K ISKI R I+ RD NRFHHF GSC+CGDYW
Sbjct: 578 VKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 80 ALHVFNSMPRRSSVSY--NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK 137
ALH + S SY A++S Y G AR +FD+MP +VS M++ Y
Sbjct: 140 ALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMG 199
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLA 193
+L AR LF+ +P++D + WN M+ GY Q+G + A ++F RML E +E++ +L+
Sbjct: 200 ALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLS 259
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWN-----SLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
A Q G +E L N V N +L+ + K L DA +F + +D V
Sbjct: 260 AVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIV 319
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
WN MI GYA + +A +F + + + T+ +++ +G V+E R F +M
Sbjct: 320 VWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSM 379
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 38/291 (13%)
Query: 349 GYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP 408
YA SG + H+ L R I + + I ++ G L L +M G
Sbjct: 65 AYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHT 124
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM------------------ 450
++ L C L+ LG+ LH K+ +V ALL M
Sbjct: 125 LSASLPACRGLS---LGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMP 181
Query: 451 -------------YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
Y G++++A F+ + KD I WN MI GY +HG +AL LF
Sbjct: 182 DPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRR 241
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M +PD++T+V +LSA + G VE G + V N + T +VD+ + G
Sbjct: 242 MLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCG 301
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN 608
L++A + + D W A++ ++G + KA E+ ++ +
Sbjct: 302 SLEDAVAVFHGIG-NKDIVVWNAMINGYAMHGDS---RKALEMFVQLRDQG 348
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 151/375 (40%), Gaps = 57/375 (15%)
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
YA +G D + + R + I + + A+ G L + ++
Sbjct: 65 AYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHT 124
Query: 223 MGGFVKQKR---LGDA--KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+ + R LG A + F D +++ YA+ A A+ LF+E P
Sbjct: 125 LSASLPACRGLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPH 184
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-- 335
V + TAM++ Y G +D+AR +FD +P K+ + WNAMI GY Q + + A +LF M
Sbjct: 185 VVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLR 244
Query: 336 ------------TCKNVASWNTMITG--------------------------YAQSGEIT 357
VA T+ +G Y + G +
Sbjct: 245 SSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLE 304
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F + D + W A+I GYA G S +L +F++++ G F +L+ C+
Sbjct: 305 DAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACS 364
Query: 418 NLASLELGKQLHGQLV-KVGFEA-----GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDK 470
+ +E G+ + + G + GC V + + G +EEA+H + + +
Sbjct: 365 HSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVD-----LLGRAGLIEEAFHLVQSLTITP 419
Query: 471 DVISWNTMIAGYARH 485
D + W +++A H
Sbjct: 420 DAVMWVSLLAACRLH 434
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 133/287 (46%), Gaps = 25/287 (8%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR----NKS 138
+F+ MP VS AM++ Y G LD AR++FD +P++D + WN MI GY + N++
Sbjct: 176 LFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEA 235
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF-----DRMLEKNEISWNGLLA 193
L R + + D V+ +LS AQ G ++ + + R ++ N L+
Sbjct: 236 LQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVD 295
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR-MPVRDEVSWNT 252
Y + G +E+A +F N ++V WN+++ G+ GD++ + + +RD+ W T
Sbjct: 296 MYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMH---GDSRKALEMFVQLRDQGLWPT 352
Query: 253 MIT------GYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIF 301
IT + + + E + F+ + + + MV + G ++EA +
Sbjct: 353 DITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLV 412
Query: 302 DAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
++ + V W +++A K M + + + + + +A+ I
Sbjct: 413 QSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYI 459
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/565 (40%), Positives = 330/565 (58%), Gaps = 12/565 (2%)
Query: 226 FVKQKRLGDAKW---IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
F + GD + +F +P D +NT+ + + LF ++ T
Sbjct: 43 FCSLSKHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPN 102
Query: 283 AMV-SGYVQNGKVDEARMIFDAMPEK-----NTVSWNAMIAGYVQTKRMDMARELFEAMT 336
A ++ K++E A K +T + N +I Y +D AR +F M+
Sbjct: 103 AFTFPSLIRACKLEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMS 162
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRLFI 395
NV SW ++++GY+Q G + A +F+ MP + + +SW A+IA + + ++ LF
Sbjct: 163 DPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFR 222
Query: 396 EMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M+ + L+R ++LS C + +LE G +H + K G + ++ MYCKC
Sbjct: 223 RMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKC 282
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGI 513
G +++A+H F + K V SWN MI G+A HG G+DA+ LF+ M+ + PD IT V +
Sbjct: 283 GCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNV 342
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L+AC+H+GLVE+G YF M +G+ P +HY CMVDLL RAGRL+EA+ ++ MP P
Sbjct: 343 LTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSP 402
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
DAA GALLGACR++G EL E+ + E++PEN+G YV+L N+YA+ G+W V+ VR
Sbjct: 403 DAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRK 462
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M DRGVKK G+S +E++ V+ F G HP + IYA + E+ ++ GFV T
Sbjct: 463 LMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDG 522
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
VLHD+ EEE+E+ L YHSEKLA+AYG+L G +RV KNLRVC+DCH A K ISK+
Sbjct: 523 VLHDLVEEERENPLFYHSEKLAIAYGLLKTKRGETLRVTKNLRVCKDCHQASKMISKVYD 582
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
II+RD +RFHHFS G CSC DYW
Sbjct: 583 CDIIIRDRSRFHHFSNGECSCKDYW 607
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 175/419 (41%), Gaps = 67/419 (15%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D + N +I Y SL AR +F M +VVSW +++SGY+Q G D A R+F+ M
Sbjct: 134 DTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMP 193
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDA 235
+KN +SWN ++A +V+ R EA LF E K + +++ L
Sbjct: 194 CKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQG 253
Query: 236 KWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
WI + V D T+I Y + L +A +F VK V +W M+ G+ +
Sbjct: 254 MWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMH 313
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
GK ++A +F M E EAM + ++ ++T A
Sbjct: 314 GKGEDAIRLFKEMEE--------------------------EAMVAPDSITFVNVLTACA 347
Query: 352 QSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
SG + F M I + ++ A++G E++ ++ EM +
Sbjct: 348 HSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPM---SPDA 404
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFE-AGCFV--GNALLVMYCKCGSVEEAYHA 463
+ ++L C +LELG+++ +++++ E +G +V GN MY CG E+
Sbjct: 405 AVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGN----MYASCGKWEQVAGV 460
Query: 464 FEEIVDKDVIS------------WNTMIAGYARHGFGKDALM----LFESMKTVGIKPD 506
+ + D+ V N +AG H + + ES++ VG PD
Sbjct: 461 RKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPD 519
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 26/269 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D N I + G D A VF +M + VS+ +++SGY G +D A +VF+ MP
Sbjct: 134 DTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMP 193
Query: 120 -QRDLVSWNVMISGYVRNKSLSAARNLFEMMP-----KRDVVSWNTMLSGYAQNGYADAA 173
+++ VSWN MI+ +V+ A LF M + D TMLS G +
Sbjct: 194 CKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQG 253
Query: 174 RRIFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
I + +EK I + LA Y + G +++A +F V SWN ++GGF
Sbjct: 254 MWI-HKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAM 312
Query: 229 QKRLGDAKWIF-----DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA-------PVK 276
+ DA +F + M D +++ ++T A + + E F P K
Sbjct: 313 HGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTK 372
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
+ + MV + G+++EA+ + D MP
Sbjct: 373 E--HYGCMVDLLARAGRLEEAKKVIDEMP 399
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 362/618 (58%), Gaps = 49/618 (7%)
Query: 210 SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA--- 266
+++N + + N L+ KQ L A + + P + ++ +I + N L +
Sbjct: 41 TRSNGDSNNNNPLIQSLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDL 100
Query: 267 -QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM-----IAGYV 320
+ L + +D F T +++ Y + +D AR +FD ++ WNA+ +AGY
Sbjct: 101 HRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYG 160
Query: 321 QT-----KRMD------------------MARELFEAMTCK---------------NVAS 342
+ +RM+ +A E F ++ +V
Sbjct: 161 REVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHI 220
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
T++ YA+ G + +A +FD+MP + +SW+A+IA Y+++G ++L LF +M +
Sbjct: 221 MTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQ 280
Query: 403 RL--NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
L N SVL CA LA+LE GK +HG +++ G ++ V +AL+ +Y +CG++E
Sbjct: 281 DLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELG 340
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
+ FE + +DV+SWN++I+ Y HGFG+ A+ +F+ M G+ P I+ V +L ACSH
Sbjct: 341 HRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHA 400
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGA 580
GLVE+G F SM R + + P+ +HY CMVDLLGRA RLDEA ++ +M EP WG+
Sbjct: 401 GLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGS 460
Query: 581 LLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
LLG+CR++ ELAE+A +FE+EP NAG YVLL+++YA + W +V +V++ + RG+
Sbjct: 461 LLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGL 520
Query: 641 KKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGE 700
+KV G S +E++ K+++F D +P+ ++++A L +L ++K+ G+V TK+VL+D+
Sbjct: 521 QKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDP 580
Query: 701 EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRD 760
EEKE ++ HSEKLA+A+G+++ G IR+ KNLR+CEDCH+ K ISK R I++RD
Sbjct: 581 EEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRD 640
Query: 761 NNRFHHFSGGSCSCGDYW 778
NRFH F G CSCGDYW
Sbjct: 641 VNRFHLFQDGVCSCGDYW 658
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 141/334 (42%), Gaps = 64/334 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--PQRDLVS 125
+ + R GC +A VF+ MP ++ VS++AMI+ Y NG+ A ++F +M +DL+
Sbjct: 225 LDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLP 284
Query: 126 WNV---------------------------------------MISGYVRNKSLSAARNLF 146
+V +++ Y R +L +F
Sbjct: 285 NSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVF 344
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIE 202
E M KRDVVSWN+++S Y +G+ A +IF M+++ + IS+ +L A G +E
Sbjct: 345 ERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVE 404
Query: 203 EACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITG 256
E +LFES K V + ++ + RL +A I D M + W +++
Sbjct: 405 EGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGS 464
Query: 257 --YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQN---GKVDEARMIFDA-----M 304
N LAE RLFE P + + + Y + +V +M+ +A +
Sbjct: 465 CRIHCNVELAERATSRLFELEPT-NAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKV 523
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
P ++ + I ++ + E A+ K
Sbjct: 524 PGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLK 557
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 160/402 (39%), Gaps = 71/402 (17%)
Query: 22 SINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAG------------DWDIRQWNVAIT 69
++N+ + P P++ T + + S +R P G D D I
Sbjct: 62 NLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLIN 121
Query: 70 THMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD--QMPQRDLVSWN 127
+ D+A VF+ +R+ +NA+ L G R+V D + R V +
Sbjct: 122 MYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGY---GREVLDLYRRMNRIGVPSD 178
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVS-------------WNTMLSGYAQNGYADAAR 174
YV +++ + ++ R++ T+L YA+ G A
Sbjct: 179 RFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNAS 238
Query: 175 RIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK--ANWEVV--------------- 217
R+FD+M KN +SW+ ++A Y +NG+ EA LF N +++
Sbjct: 239 RVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAA 298
Query: 218 ----SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA 273
LM G++ ++ L +PV + ++T YA+ L R+FE
Sbjct: 299 LAALEQGKLMHGYILRRGLDSI------LPV-----VSALVTVYARCGNLELGHRVFERM 347
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR 329
+DV +W +++S Y +G +A IF M ++ + +S+ +++ ++ +
Sbjct: 348 EKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGK 407
Query: 330 ELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRM 366
LFE+M +V + M+ ++ + A + D M
Sbjct: 408 VLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDM 449
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/699 (33%), Positives = 400/699 (57%), Gaps = 48/699 (6%)
Query: 16 LHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNG 75
+ QH++++++ + N + SK L + N+ S N + I Q N I + RNG
Sbjct: 1 MKQHSRTLHKRITKLNL--FQSK--LNQSHNNDSINSGGKGSKFLI-QCNTQIAENGRNG 55
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR 135
A +F+ MP +++ S+ AM++ + NGQ+ AR++FD+MPQR VS N MIS Y+R
Sbjct: 56 NVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISAYIR 115
Query: 136 NK-SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE--KNEISWNGLL 192
N ++ A LF ++ +R++VS+ M+ G+ + G A +++ ++ N L+
Sbjct: 116 NGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRETPYEFRDPACSNALI 175
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
Y++ G + EA +FE+ +VVSW++++ G + R+ A+ +FDRMP R+ VSW+
Sbjct: 176 NGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMPDRNVVSWSA 235
Query: 253 MITGYAQNNYLAEAQRLF----EEAPVK-------------------------------- 276
MI GY + E LF E V+
Sbjct: 236 MIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHGLVSRL 295
Query: 277 ----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
D ++++ Y G D A +F + +K+ V+WN++I+GY+ ++ A +F
Sbjct: 296 GFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYRVF 355
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
M K+V SW MI G+++SG + +A LF+ +P D W AII+G+ + E++L
Sbjct: 356 GRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISGFVNNNEYEEALH 415
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
+ M G + N +SVL+ A L +L G Q+H ++K+ E + N+L+ Y
Sbjct: 416 WYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYNLSIQNSLISFYS 475
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVG 512
K G+V +AY F ++++ +VIS+N++I+G+A++GFG +AL +++ M++ G +P+ +T +
Sbjct: 476 KSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGIYKKMQSEGHEPNHVTFLA 535
Query: 513 ILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFE 572
+LSAC+H GLV++G F +M YG+ P + HY CMVD+LGRAG LDEA +L+++MPF+
Sbjct: 536 VLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGRAGLLDEAIDLIRSMPFK 595
Query: 573 PDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVR 632
P + WGA+LGA + + + +LA+ AA+ I ++EP+NA YV+LSN+Y+A+G+ D V+
Sbjct: 596 PHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATPYVVLSNMYSAAGKKIDGDLVK 655
Query: 633 LKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
+ +G+KK G SW+ ++NKVH F GD H + I
Sbjct: 656 MAKNLKGIKKSPGCSWITMKNKVHLFLAGDQSHGSIEEI 694
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/513 (39%), Positives = 327/513 (63%), Gaps = 11/513 (2%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
+D+ +WT++++GY QN DEA + M + N ++ +++ + + +
Sbjct: 3 TRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 62
Query: 331 LFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+ A+T K +V + ++ YA+ G + A +FD++ + +SW A+IAG+A+ G
Sbjct: 63 I-HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 121
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
E +L +F EM+R G ++SV S A + +LE GK +H ++K G FVGN
Sbjct: 122 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 181
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+L MY K GS+ +A F+ + KD+++WN+M+ +A++G G++A+ FE M+ G+
Sbjct: 182 TILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 241
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+ IT + IL+ACSH GLV++G +YF M +++ + P HY +VDLLGRAG L++A
Sbjct: 242 NQITFLSILTACSHGGLVKEGKQYF-DMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVF 300
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ MP +P AA WGALLG+CR++ ++ + AA+ +FE++P++ G VLL N+YA++G+W
Sbjct: 301 IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQW 360
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
++VR M+ GVKK SW+E++N VH F D HP + IY EE+ ++++
Sbjct: 361 DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA 420
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+V +T VL V E+E++ L+YHSEK+A+A+ ++++P G IR+MKN+R+C DCH+A
Sbjct: 421 GYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAF 480
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++ISK+ R I++RD NRFHHFS GSCSCGDYW
Sbjct: 481 RYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 120/228 (52%), Gaps = 10/228 (4%)
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
M D SW ++IAGYAQ+ +++L L + M R + N F S+L AS +G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
+Q+H VK + +VG+ALL MY +CG ++ A F+++ K+ +SWN +IAG+AR
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG----TEYFYSMNRDYGVIP 541
G G+ L++F M+ G + T + SA + G +E+G S R +
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
N+ ++D+ ++G + +A+ + ++ + D TW ++L A YG
Sbjct: 181 NT-----ILDMYAKSGSMIDARKVFDHVD-KKDLVTWNSMLTAFAQYG 222
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 53/298 (17%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAA----RRIFDRMLEKNEISWNGLL--AAYVQNGRIE 202
M RD+ SW ++++GYAQN D A + + N ++ LL A + I
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 203 EACMLFESKANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
E K +W +V ++L+ + + R+ A +FD++ ++ VSWN +I G+A+
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 261 N-------YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NT 309
AE QR EA FT++++ S G +++ + + M + +
Sbjct: 121 GDGETTLLMFAEMQRNGFEAT---HFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSA 177
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH 369
N ++ Y ++ M AR++F+ + K++ +WN+M+T
Sbjct: 178 FVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLT--------------------- 216
Query: 370 DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQ 427
+AQ G +++ F EM++ G LN+ F S+L+ C++ ++ GKQ
Sbjct: 217 ----------AFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 264
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+ + ++ Y R + A +F+ + ++ VSWN +++G+A+ G + +F M
Sbjct: 75 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 134
Query: 181 ---LEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLG 233
E +++ + +A G +E+ + +S N+++ + K +
Sbjct: 135 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 194
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYV 289
DA+ +FD + +D V+WN+M+T +AQ EA FEE V T+ ++++
Sbjct: 195 DARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS 254
Query: 290 QNGKVDEARMIFDAMPEKN 308
G V E + FD M E N
Sbjct: 255 HGGLVKEGKQYFDMMKEHN 273
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 131/318 (41%), Gaps = 56/318 (17%)
Query: 118 MPQRDLVSWNVMISGYVRNK-------------------------------SLSAARNLF 146
M RD+ SW +I+GY +N SA+ +
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 147 EMMP--------KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQN 198
E + DV + +L YA+ G D A +FD++ KN +SWN L+A + +
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 199 GRIEEACMLFE--SKANWEVV--SWNSLMGGFVKQKRLGDAKWIFDRMPVRDE----VSW 250
G E ++F + +E +++S+ L KW+ M E
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE---- 306
NT++ YA++ + +A+++F+ KD+ TW +M++ + Q G EA F+ M +
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKN----VASWNTMITGYAQSGEITHARNL 362
N +++ +++ + ++ F+ M N + + T++ ++G + A
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVF 300
Query: 363 FDRMPQHDCIS-WAAIIA 379
+MP + W A++
Sbjct: 301 IFKMPMKPTAAVWGALLG 318
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 58 DW--DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
DW D+ + + + R G D A+ VF+ + ++ VS+NA+I+G+ G + +F
Sbjct: 71 DWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMF 130
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQN 167
+M + +++ + S +L + + M K NT+L YA++
Sbjct: 131 AEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKS 190
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLM 223
G AR++FD + +K+ ++WN +L A+ Q G EA FE V +++ S++
Sbjct: 191 GSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSIL 250
Query: 224 -----GGFVKQKRLGDAKWIFDRM 242
GG VK+ K FD M
Sbjct: 251 TACSHGGLVKE-----GKQYFDMM 269
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/572 (37%), Positives = 326/572 (56%), Gaps = 39/572 (6%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + N ++ YA L A+ LFE ++V +W ++ G ++NG + AR +FD MP
Sbjct: 76 DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMP 135
Query: 306 EKNTVSWNAMIAGYVQTKR--------MDMARE------------------LFEAMTCKN 339
+N +WNAM+AG + M RE L + ++ +
Sbjct: 136 TRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQ 195
Query: 340 VASW-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
V ++ N++ Y + G + + +P +S+ IAG Q+G
Sbjct: 196 VHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGD 255
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
SE +L F M+ + F S +S C++LA+L G+Q+H Q++K G + V +
Sbjct: 256 SEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITS 315
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY +CG + ++ ++ D+ + MI+ HG G A+ LF+ M G +P+
Sbjct: 316 LVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPN 375
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
++T + +L ACSH+GL ++G E+F M + YG P+ KHY C+VDLLGR+G LDEA+ L+
Sbjct: 376 EVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALI 435
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+MP D W LL AC+ ++AE+ AE + E +P ++ YVLLSN+ A S RWG
Sbjct: 436 LSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWG 495
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DV++VR MR++ ++K G SW+E + +VH F GD HP + I YL+E+ K++Q G
Sbjct: 496 DVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCG 555
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ +V HD+ +EEKE L +HSEKLA+A+ L++P G PIRVMKNLRVC+DCH AIK
Sbjct: 556 YAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIK 615
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS++ GR I++RD +RFHHF G CSCGDYW
Sbjct: 616 LISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 174/404 (43%), Gaps = 47/404 (11%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
+ N ++ Y G L AR +F+ + +R+++SWN++I G ++N L +AR LF+ MP R+
Sbjct: 79 TTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRN 138
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAY-----VQNGRIEEA 204
V +WN M++G G + + + F M + +E + V +GR A
Sbjct: 139 VATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHA 198
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+ S + ++ NSL +++ L + + + +P VS+NT I G QN
Sbjct: 199 -YVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSE 257
Query: 265 EAQRLF------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
A F E AP DV T+ + +S + +A
Sbjct: 258 GALEYFSMMRGVEVAP--DVVTFVS-------------------------AISCCSDLAA 290
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
Q +++ ++ +A K V +++ Y++ G + + ++D D +A+I
Sbjct: 291 LAQGQQVHA--QVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMI 348
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV-GF 437
+ G ++ LF +M G N F ++L C++ + G + + K GF
Sbjct: 349 SACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGF 408
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIA 480
+ N ++ + + G ++EA + V D + W T+++
Sbjct: 409 QPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLS 452
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 148/369 (40%), Gaps = 72/369 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
++ WN+ I ++NG SA +F+ MP R+ ++NAM++G G + + Q F M
Sbjct: 107 NVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMR 166
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
+ D+ N + Y+R L+
Sbjct: 167 REGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLA 226
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
+ +P +VS+NT ++G QNG ++ A F M+ E++ + + +V
Sbjct: 227 EGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFS-MMRGVEVAPD--VVTFVSA-- 281
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
C + A + V + G K +PV +++ Y++
Sbjct: 282 -ISCCSDLAALAQGQQVHAQVIKAGVDKV------------VPV-----ITSLVHMYSRC 323
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMI 316
L +++R+++ D+F +AM+S +G+ +A +F M E N V++ A++
Sbjct: 324 GCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALL 383
Query: 317 AGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHD 370
+ D E FE MT +V +N ++ +SG + A L MP + D
Sbjct: 384 YACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRAD 443
Query: 371 CISWAAIIA 379
+ W +++
Sbjct: 444 GVIWKTLLS 452
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 408 PFTSVLSTCANLAS--------LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
PF VL + A+L S + L +QLH G A F N LL+ Y G +
Sbjct: 36 PFRGVLWSDASLFSHIFRACRAIPLLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPT 95
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A H FE I ++V+SWN +I G ++G A LF+ M T + + + G+ ++
Sbjct: 96 ARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGL----TN 151
Query: 520 TGLVEKGTEYFYSMNRDYGVIPN 542
GL E ++F +M R+ G+ P+
Sbjct: 152 VGLDEDSLQFFLAMRRE-GMHPD 173
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 321/544 (59%), Gaps = 34/544 (6%)
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV------FTWTAMVSGYVQNGKVD 295
MP RD V+WN++I+GYA YL + + +V T+ +M+S V G +
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGE 355
E I G V ++ + V N ++ Y ++G+
Sbjct: 61 EG----------------VCIHGLV-----------MKSGVLEEVKVVNALMNLYGKTGD 93
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ + LF+ + + +SW +I + Q+G +E+ L F + G + +++ F +VL
Sbjct: 94 LISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRV 153
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C ++ + L + +HG ++ GF A + ALL +Y K G +E++ F EI D ++W
Sbjct: 154 CEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAW 213
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNR 535
M+A YA HG+G+DA+ FE M G+ PD +T +L+ACSH+GLVE+G YF +M++
Sbjct: 214 TAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSK 273
Query: 536 DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAE 595
Y + P HY+CMVDL+GR+G L +A L+K MP EP + WGALLGACR+Y T+L
Sbjct: 274 RYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGT 333
Query: 596 KAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKV 655
KAA+ +FE+EP + Y++LSN+Y+ASG W D S++R M+ +G+ + +GYS++E NK+
Sbjct: 334 KAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKI 393
Query: 656 HTFSVGDTLHPEKDRIYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
H F VGD HPE ++I L+E+ K+K + GF T+ VLHDV E+ KE M+ HSEK+
Sbjct: 394 HKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKI 453
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
A+A+G+L I PI + KNLR+C DCH K IS I R II+RD+ RFHHF GSCSC
Sbjct: 454 AMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSC 513
Query: 775 GDYW 778
DYW
Sbjct: 514 RDYW 517
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 37/290 (12%)
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK------NEISWNGLLAAYVQNGRIE 202
MP+RD+V+WN+++SGYA GY + RM+ NE+++ +++A V G E
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 203 EAC----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYA 258
E ++ +S EV N+LM + K L + +F+ + V++ VSWNTMI +
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 259 QNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM--IFDAMPEKNTVSWNAMI 316
QN E F ++ W + K D+A + + V + I
Sbjct: 121 QNGLAEEGLAYF------NMSRWVGL--------KPDQATFLAVLRVCEDIGVVRLSQGI 166
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
G + F A TC A ++ YA+ G + + +F + D ++W A
Sbjct: 167 HGLIMFCG-------FNANTCITTA----LLDLYAKLGRLEDSSTVFLEITSPDSMAWTA 215
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
++A YA GY D+++ F M YG + FT +L+ C++ +E G+
Sbjct: 216 MLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGR 265
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 159/378 (42%), Gaps = 64/378 (16%)
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL------VSWNVMISG-------- 132
MP R V++N++ISGY G L +V +M + ++ V++ MIS
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 133 ---------------------------YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
Y + L ++ LFE + +++VSWNTM+ +
Sbjct: 61 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120
Query: 166 QNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNG--RIEEAC--MLFESKANWEVV 217
QNG A+ F+ L+ ++ ++ +L G R+ + ++ N
Sbjct: 121 QNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTC 180
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EA 273
+L+ + K RL D+ +F + D ++W M+ YA + Y +A + FE
Sbjct: 181 ITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYG 240
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMA 328
D T+T +++ +G V+E R F+ M ++ + ++ M+ ++ + A
Sbjct: 241 LSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDA 300
Query: 329 RELFEAMTCK-NVASWNTMITG---YAQSGEITH-ARNLFDRMPQHDCISWAAIIAGYAQ 383
L + M + + W ++ Y + T A+ LF+ P+ D ++ + Y+
Sbjct: 301 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPR-DGRNYIMLSNIYSA 359
Query: 384 SGYSEDSLRLFIEMKRYG 401
SG +D+ R+ MK+ G
Sbjct: 360 SGLWKDASRIRNLMKQKG 377
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/480 (42%), Positives = 309/480 (64%), Gaps = 2/480 (0%)
Query: 301 FDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHA 359
F A P + V +++I Y + + AR++F+++ KN W +++GYA +G A
Sbjct: 37 FVASPYSADDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVWTALVSGYASNGCTGEA 96
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS-PFTSVLSTCAN 418
+LF MP+ +W A+I+G+ ++G + ++ LF+EM+R G R++ + +V+ A
Sbjct: 97 IDLFRSMPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLATVVGGAAE 156
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
LA+L LG+QLHG + +GF + VGNAL+ MY KC + A F I+ +DV+SW T+
Sbjct: 157 LAALVLGRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVRDVVSWTTI 216
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
+ G A+HG ++ L L++ M G+KP+++T VG++ ACSH GLV+KG + F SM R+YG
Sbjct: 217 LVGEAQHGRVEEVLALYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYG 276
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P +HYTC +DLL R+G L EA+ L+ MP+EPD A+WGALL AC+ + T++ + A
Sbjct: 277 IKPGLQHYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWGALLSACKKHNDTQMCLRVA 336
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + E+ P++ Y+LLSN+YA + +W V+KVR M + ++K GYSW+E + F
Sbjct: 337 DNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKEPGYSWIEAGRESRMF 396
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
G+ + I +LEEL ++++ G+V T V+HD+ E EKE L HSE+LAVA+
Sbjct: 397 HAGEVPLDIGEEITRFLEELVSEMRKRGYVPDTSSVMHDLEENEKEQHLFLHSERLAVAF 456
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
GIL P G IRV+KNLRVC DCH +K IS+I R II+RD +RFHHF G+CSC ++W
Sbjct: 457 GILKSPPGSVIRVVKNLRVCGDCHTVMKFISEIAQRKIIVRDASRFHHFEDGNCSCSEFW 516
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 52/316 (16%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D+V +++I Y + +A+++F+ VK+ WTA+VSGY NG EA +F +MP
Sbjct: 45 DDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVWTALVSGYASNGCTGEAIDLFRSMP 104
Query: 306 EKNTVSWNAMIAGYVQTK-----------------RMD-------------------MAR 329
E+ +W A+I+G+V+ R+D + R
Sbjct: 105 ERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLATVVGGAAELAALVLGR 164
Query: 330 ELFE-AMTCKNVASW---NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
+L A+T ++S N ++ Y++ +I AR +F + D +SW I+ G AQ G
Sbjct: 165 QLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVRDVVSWTTILVGEAQHG 224
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVG 444
E+ L L+ M G + N F ++ C++ ++ G+QL + + G + G
Sbjct: 225 RVEEVLALYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHY 284
Query: 445 NALLVMYCKCGSVEEAYHAFEEIV-----DKDVISWNTMIAGYARHGFGKDALMLFESMK 499
L + + G + EA EE++ + D SW +++ +H + L + +++
Sbjct: 285 TCYLDLLSRSGYLSEA----EELITTMPYEPDEASWGALLSACKKHNDTQMCLRVADNL- 339
Query: 500 TVGIKPDDITMVGILS 515
+ ++P D + +LS
Sbjct: 340 -LELRPKDPSTYILLS 354
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 42/327 (12%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H S V +++I Y G + AR+VFD + ++ V W ++SGY N
Sbjct: 36 HFVASPYSADDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVWTALVSGYASNGCTGE 95
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRI 201
A +LF MP+R + +W ++SG+ + G A +F M + + A V G
Sbjct: 96 AIDLFRSMPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLATVVGGAA 155
Query: 202 EEACMLFESKANWEVVSW---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
E A ++ + + ++ N+L+ + K + A+ +F + VRD VSW T
Sbjct: 156 ELAALVLGRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVRDVVSWTT 215
Query: 253 MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSW 312
++ G AQ+ + E L++ RM+ M + N V++
Sbjct: 216 ILVGEAQHGRVEEVLALYD--------------------------RMLLAGM-KPNEVTF 248
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMP 367
+I + R+LF++M + + + + ++SG ++ A L MP
Sbjct: 249 VGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMP 308
Query: 368 -QHDCISWAAIIAGYAQSGYSEDSLRL 393
+ D SW A+++ + ++ LR+
Sbjct: 309 YEPDEASWGALLSACKKHNDTQMCLRV 335
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD- 122
W ++ + NGC A+ +F SMP R ++ A+ISG++ G A +F +M +RD
Sbjct: 80 WTALVSGYASNGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTGAVGLFVEM-RRDG 138
Query: 123 ----------------------------------------LVSWNVMISGYVRNKSLSAA 142
++ N ++ Y + + +A
Sbjct: 139 VRIDDAFVLATVVGGAAELAALVLGRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSA 198
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQN 198
R +F + RDVVSW T+L G AQ+G + ++DRML + NE+++ GL+ A
Sbjct: 199 REVFGGIIVRDVVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEVTFVGLIYACSHA 258
Query: 199 GRIEEACMLFES-KANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNT 252
G +++ LF+S K + + + + + L +A+ + MP DE SW
Sbjct: 259 GLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWGA 318
Query: 253 MITGYAQNN----YLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
+++ ++N L A L E P KD T+ + + Y N K D + M E
Sbjct: 319 LLSACKKHNDTQMCLRVADNLLELRP-KDPSTYILLSNVYAVNCKWDSVAKVRKIMAE 375
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G+QLH V + A V ++L+ MYCKCG E+A F+ I K+ + W +++GYA
Sbjct: 30 GRQLHAHFVASPYSADDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVWTALVSGYAS 89
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
+G +A+ LF SM G+ + G + A ++TG V F M RD
Sbjct: 90 NGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTGAV----GLFVEMRRD 137
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/609 (37%), Positives = 346/609 (56%), Gaps = 22/609 (3%)
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM---PV--R 245
L+ +GR+ +A L + ++ SL+ + + A + R+ PV
Sbjct: 223 LIQMLCAHGRLAQATALLQGLPAPTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRS 282
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM- 304
D +I YA + L A+++F+EAPVK++F W AM+ +EA M
Sbjct: 283 DPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMG 342
Query: 305 ----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS--------WNTMITGYAQ 352
P + + + A + A M + T+I YA+
Sbjct: 343 RLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAK 402
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL--NRSPFT 410
G +++A +F MP + +SW+A+I YA++ D++++F EM L N
Sbjct: 403 LGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIV 462
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VD 469
SVL CA + +L GK LH +++ GF+ V NAL+ MY KCG +E + F I
Sbjct: 463 SVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRR 522
Query: 470 KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEY 529
++V+SWN++I+GY HGFG+++L +FE M GI P+ IT V +L ACSH GLVE+G +
Sbjct: 523 RNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKL 582
Query: 530 FYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYG 589
F SM +Y V P ++HY CMVDLLGRAGRLDEA L+++M +P WG+LLGACR++G
Sbjct: 583 FESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHG 641
Query: 590 KTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWL 649
E AE A +F++EP NAG YVLL+++YA + V ++ + + ++KV G SW+
Sbjct: 642 HVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGCSWI 701
Query: 650 EVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRY 709
EV+ K+++F D +P+ + + A + E ++K +G+V T+ VL+D+ EEEKE +L
Sbjct: 702 EVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLG 761
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSEKLAVA+G++ +G IR+ KNLR+CEDCH+ K ISK R I++RD NRFHHF
Sbjct: 762 HSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHFRN 821
Query: 770 GSCSCGDYW 778
G CSC DYW
Sbjct: 822 GVCSCRDYW 830
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 51/238 (21%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD----- 122
I + + G A VF SMP R+ VS++AMI Y N + A Q+F +M D
Sbjct: 397 IDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVP 456
Query: 123 -----------------------------------LVS-WNVMISGYVRNKSLSAARNLF 146
LVS N +++ Y++ L R +F
Sbjct: 457 NSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIF 516
Query: 147 E-MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRI 201
+ +R+VVSWN+++SGY +G+ + ++F+ M+E+ N I++ +L A G +
Sbjct: 517 NWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLV 576
Query: 202 EEACMLFESKANWEVVS----WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMI 254
E+ LFES + V + ++ + RL +A + M ++ W +++
Sbjct: 577 EQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLL 634
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS-VSYNAMISGYLLNGQLDPARQVFD 116
D + N + +M+ GC ++ ++FN + RR + VS+N++ISGY ++G + QVF+
Sbjct: 490 DLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFE 549
Query: 117 QMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNG 168
+M + +++++ ++ + + LFE M + +V + M+ + G
Sbjct: 550 EMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAG 609
Query: 169 YADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACM 206
D A + M ++ + W LL A +G +E A M
Sbjct: 610 RLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEM 648
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/687 (36%), Positives = 373/687 (54%), Gaps = 71/687 (10%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA-------ARNLFEMMPKRDVVSWNTM 160
L R + QM + L + N +S + LS A ++FE + + +++ WNTM
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
G+A + +A +++ M+ GLL + ++C +SKA E
Sbjct: 63 FRGHALSSDPVSALKLYVCMISL------GLLPNSYTFPFLLKSCA--KSKAFKE---GQ 111
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT 280
+ G +K LG D ++I+ Y QN L +A ++F+E+P +DV +
Sbjct: 112 QIHGHVLK---LGCD---------LDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVS 159
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
+TA++ GY G ++ A+ +FD +P K+ VSWNAMI+GY +T A ELF+ M NV
Sbjct: 160 YTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 219
Query: 341 --------------------------ASW-------------NTMITGYAQSGEITHARN 361
SW N +I Y++ GE+ A
Sbjct: 220 RPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACG 279
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF+ +P D ISW +I GY +++L LF EM R GE N S+L CA+L +
Sbjct: 280 LFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 339
Query: 422 LELGKQLHGQLVK--VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+++G+ +H + K G + +L+ MY KCG +E A+ F I+ K + SWN MI
Sbjct: 340 IDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 399
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
G+A HG + +F M+ GI+PDDIT VG+LSACSH+G+++ G F SM +DY +
Sbjct: 400 FGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKM 459
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P +HY CM+DLLG +G EA+ ++ M EPD W +LL AC+++G EL E A+
Sbjct: 460 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQ 519
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ ++EPEN G YVLLSN+YA +GRW +V+ R + D+G+KKV G S +E+ + VH F
Sbjct: 520 NLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFI 579
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
+GD HP IY LEE+E L++ GFV T VL ++ EE KE LR+HSEKLA+A+G
Sbjct: 580 IGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 639
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIK 746
++S G + ++KNLRVC +CH A K
Sbjct: 640 LISTKPGTKLTIVKNLRVCRNCHEAYK 666
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 224/517 (43%), Gaps = 99/517 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
I H+ CD L+V + ++IS Y+ NG+L+ A +VFD+ P RD+VS+
Sbjct: 113 IHGHVLKLGCDLDLYV-----------HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYT 161
Query: 128 VMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN--- 184
+I GY + A+ +F+ +P +DVVSWN M+SGYA+ G A +F M++ N
Sbjct: 162 ALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 221
Query: 185 -EISWNGLLAAYVQNGRIEEACMLFE------SKANWEVVSWNSLMGGFVKQKRLGDAKW 237
E + +++A Q+G IE + +N ++V N+L+ + K L A
Sbjct: 222 DESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIV--NALIDLYSKCGELETACG 279
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQNGK 293
+F+ +P +D +SWNT+I GY N EA LF+E + T +++ G
Sbjct: 280 LFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 339
Query: 294 VDEARMIFDAMPEKNTVSWNA------MIAGYVQTKRMDMARELFEAMTCKNVASWNTMI 347
+D R I + ++ NA +I Y + ++ A ++F ++ K+++SWN MI
Sbjct: 340 IDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 399
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
G+A G + ++F RM ++G D +
Sbjct: 400 FGFAMHGRADASFDIFSRM---------------RKNGIEPDDIT--------------- 429
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
F +LS C++ L+LG+ + + + +
Sbjct: 430 -FVGLLSACSHSGMLDLGRHIFRSMTQ------------------------------DYK 458
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGT 527
+ + + MI G K+A E + T+ ++PD + +L AC G VE G
Sbjct: 459 MTPKLEHYGCMIDLLGHSGLFKEAE---EMINTMEMEPDGVIWCSLLKACKMHGNVELGE 515
Query: 528 EYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
+ ++ + P S Y + ++ AGR +E N
Sbjct: 516 SFAQNLIKIEPENPGS--YVLLSNIYATAGRWNEVAN 550
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 194/413 (46%), Gaps = 38/413 (9%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ I+ +++NG + A VF+ P R VSY A+I GY G ++ A++
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQK 178
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGY 169
+FD++P +D+VSWN MISGY + A LF+ M K +V + T++S AQ+G
Sbjct: 179 MFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 238
Query: 170 ADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ R++ D N N L+ Y + G +E AC LFE +V+SWN+L+GG
Sbjct: 239 IELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGG 298
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVF 279
+ +A +F M E + TM++ +L ++ + +K V
Sbjct: 299 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVA 358
Query: 280 TW----TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
T+++ Y + G ++ A +F+++ K+ SWNAMI G+ R D + ++F M
Sbjct: 359 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRM 418
Query: 336 TCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGY 386
+ ++ +++ + SG + R++F M Q ++ + +I SG
Sbjct: 419 RKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG- 477
Query: 387 SEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C ++ELG+ L+K+
Sbjct: 478 ------LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKI 524
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 256/737 (34%), Positives = 383/737 (51%), Gaps = 60/737 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
NAM+S + G+ A +VF +MP+RD+ SWNVM+ GY ++ L A +L+ M +
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186
Query: 152 RDVVSW-----------------------------------NTMLSGYAQNGYADAARRI 176
DV ++ N +++ YA+ G AAR++
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKV 246
Query: 177 FDRMLEKNEISWNGLLAAYVQNGRIEEACMLF------ESKANWEVVSWNSLMGGFVKQK 230
FD M + ISWN ++A + +NG LF E + N ++ ++ G +
Sbjct: 247 FDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDV 306
Query: 231 RLGDA--KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
R D N++I YA + +A+ +F +D TWTAM+SGY
Sbjct: 307 TFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGY 366
Query: 289 VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK-----RMDMARELFEAMTCKNVASW 343
+NG D+A ++ A+ E N VS + + +D+ +L E K S+
Sbjct: 367 EKNGFPDKALEVY-ALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISY 425
Query: 344 ----NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
N ++ YA+S I A +F M + D +SW+++IAG+ + + ++L F M
Sbjct: 426 IVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA 485
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
+ N F + L+ CA +L GK++H +++ G E ++ NAL+ +Y KCG
Sbjct: 486 -DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGY 544
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A+ F KDV+SWN MIAG+ HG G AL F M +G PD++T V +L ACS
Sbjct: 545 AWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSR 604
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
G+V +G E F+SM Y ++PN KHY CMVDLL RAG+L EA N + MP PDAA WG
Sbjct: 605 GGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWG 664
Query: 580 ALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRG 639
ALL CR++ EL E AA+ + +EP +AG +VLL +LYA + W +++VR MR++G
Sbjct: 665 ALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKG 724
Query: 640 VKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVG 699
+ +G SW+EV+ VH F D HP+ I LE + ++K G+ D
Sbjct: 725 LDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVESHCPED-- 782
Query: 700 EEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILR 759
E K+ + HSE+LAVA+G+++ G I V KN C+ CH +K IS IV R II+R
Sbjct: 783 EVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIVR 842
Query: 760 DNNRFHHFSGGSCSCGD 776
D+ + HHF GSCSCGD
Sbjct: 843 DSKQLHHFKDGSCSCGD 859
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 33/368 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQLDPARQ 113
D WN I H NG C++ L +F +M P +++ + SG L + A++
Sbjct: 254 DCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTF--AKE 311
Query: 114 VFDQMPQR----DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ +R D+ N +I Y + AR +F M RD ++W M+SGY +NG+
Sbjct: 312 MHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGF 371
Query: 170 ADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW----NS 221
D A ++ M + ++I+ LAA G ++ L E + +S+ N+
Sbjct: 372 PDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNA 431
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--APVKD-- 277
++ + K KR+ A +F M +D VSW++MI G+ N+ EA F A VK
Sbjct: 432 ILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNS 491
Query: 278 ----VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
+G +++GK A ++ + + + NA+I YV+ + A F
Sbjct: 492 VTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLP-NALIDLYVKCGQTGYAWAQFC 550
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ----HDCISWAAIIAGYAQSGYSED 389
A K+V SWN MI G+ G A + F++M + D +++ A++ ++ G +
Sbjct: 551 AHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSE 610
Query: 390 SLRLFIEM 397
LF M
Sbjct: 611 GWELFHSM 618
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 156/349 (44%), Gaps = 31/349 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I + G A VF+ M R ++++ AMISGY NG D A +V+ M
Sbjct: 324 DVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALME 383
Query: 120 QRDLVSWNVMISGYVRNK----SLSAARNLFEMMPKRDVVSW----NTMLSGYAQNGYAD 171
++ ++ I+ + SL L E+ + +S+ N +L YA++ D
Sbjct: 384 VNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRID 443
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC-----MLFESKANWEVVSWNSLMGGF 226
A +F M EK+ +SW+ ++A + N R EA ML + K N V++ + +
Sbjct: 444 KAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPN--SVTFIAALAAC 501
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSW-----NTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
L K I + +R + + N +I Y + A F KDV +W
Sbjct: 502 AATGALRSGKEIHAHV-LRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSW 560
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
M++G+V +G D A F+ M + + V++ A++ + + ELF +MT
Sbjct: 561 NIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTE 620
Query: 338 K-----NVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
K N+ + M+ +++G++T A N + MP D W A++ G
Sbjct: 621 KYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNG 669
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
G +GNA+L M + G A+ F ++ ++DV SWN M+ GY + G +AL L+ M
Sbjct: 122 GLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMM 181
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
G++PD T +L +C G E + R +G ++ + + G +
Sbjct: 182 WAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLR-FGFGEEVDVLNALMTMYAKCGDV 240
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA--EVIFEM-EPENAGMYVLLS 616
A+ + +M D +W A++ G E E A E+ M E + ++
Sbjct: 241 MAARKVFDSMTVM-DCISWNAMIA-----GHFENGECNAGLELFLTMLHDEVQPNLMTIT 294
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKK 642
++ ASG DV+ + +M VK+
Sbjct: 295 SVTVASGLLSDVTFAK-EMHGLAVKR 319
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPR----RSSVSYNAMISGYLLNGQLDPAR 112
G D+ WN+ I + +G D+AL FN M + V++ A++ G +
Sbjct: 553 GAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGW 612
Query: 113 QVFDQMPQR-----DLVSWNVMISGYVRNKSLSAARNLFEMMP-KRDVVSWNTMLSGYAQ 166
++F M ++ +L + M+ R L+ A N MP D W +L+G
Sbjct: 613 ELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRI 672
Query: 167 NGYAD----AARRIFDRMLEKNEISWNGLL 192
+ + + AA+ + LE N+ ++ LL
Sbjct: 673 HRHVELGELAAKYVL--ALEPNDAGYHVLL 700
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/506 (42%), Positives = 310/506 (61%), Gaps = 36/506 (7%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
D F +MV Y+ G+++ AR +FD MP ++ VSWN+MIAGY++ +++A+++FE M+
Sbjct: 143 DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMS 202
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
K+V +W +MI+ Y Q +R P +L LF E
Sbjct: 203 DKDVVTWTSMISAYVQ-----------NRCPM--------------------KALDLFRE 231
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHG--QLVKVGFEAGCFVGNALLVMYCKC 454
M G R + SVLS A+L +E GK LH + K+ +G F+G+AL+ MY KC
Sbjct: 232 MLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSG-FIGSALIDMYSKC 290
Query: 455 GSVEEAYHAFEEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
G +E AYH F I +++ WN+MI+G A HG ++AL +F M+ + I+P++IT +G+
Sbjct: 291 GYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGL 350
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
LS CSH GLVE+G YF SM+ Y ++P +HY CM+DL GRAGRL++A +++NMPFE
Sbjct: 351 LSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEA 410
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
D W A+L A +G E+ + AA E+ P+++ YVLLSN+YA +GRW DV+K+RL
Sbjct: 411 DLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRL 470
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPE-KDRIYAYLEELEFKLKQDGFVYSTK 692
MR RGVKK+ G S + V KVH F +G L ++ A + E+ +LK G+
Sbjct: 471 MMRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLT 530
Query: 693 LVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIV 752
VL D+ +E KE +L HSEK+A+A+G++ I PI ++KNLRVC DCH +K +SK+
Sbjct: 531 QVLLDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVY 590
Query: 753 GRLIILRDNNRFHHFSGGSCSCGDYW 778
R II+RD NRFHHF G CSC +YW
Sbjct: 591 NRQIIMRDQNRFHHFENGCCSCNEYW 616
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 167/331 (50%), Gaps = 23/331 (6%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N+M+ Y+ G+++ AR+VFD+MP RD+VSWN MI+GY++ + A+ +FE M +DVV
Sbjct: 148 NSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVV 207
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACML--FE 209
+W +M+S Y QN A +F ML + + +L+A G +EE L +
Sbjct: 208 TWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYV 267
Query: 210 SKANWEVVS---WNSLMGGFVKQKRLGDAKWIFDRMPVRDEV-SWNTMITGYAQNNYLAE 265
S E+ S ++L+ + K + +A +F + R + WN+MI+G A + E
Sbjct: 268 SMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLARE 327
Query: 266 AQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV-----SWNAMI 316
A +F E D+ T+ ++S G V+E + F++M EK + + MI
Sbjct: 328 ALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMI 387
Query: 317 AGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLFDR---MPQHDCI 372
+ + R++ A + + M + ++ +W +++ + G I ++ R + D
Sbjct: 388 DLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSS 447
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
S+ + YA++G +D ++ + M++ G +
Sbjct: 448 SYVLLSNIYAKAGRWDDVAKIRLMMRQRGVK 478
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 143/290 (49%), Gaps = 44/290 (15%)
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT-- 410
SG + +A ++F R+ + + A+I G++ + +SL L+ M + F+
Sbjct: 54 SGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIP 113
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
SVL C L + + G+Q+HGQ++K FVGN+++ MY G +E A F+ + ++
Sbjct: 114 SVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNR 173
Query: 471 DVISWNTMIAGYARHG------------FGKD-------------------ALMLFESMK 499
DV+SWN+MIAGY + G KD AL LF M
Sbjct: 174 DVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREML 233
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGT--EYFYSMNRDYGVIPNSKHY--TCMVDLLGR 555
++G++PD +V +LSA + G VE+G + SMN+ I S + + ++D+ +
Sbjct: 234 SLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNK----IELSSGFIGSALIDMYSK 289
Query: 556 AGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
G ++ A ++ +++ + W +++ ++G LA +A ++ EME
Sbjct: 290 CGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG---LAREALDIFVEME 336
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 125/296 (42%), Gaps = 56/296 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN I +++ G + A VF +M + V++ +MIS Y+ N A +F +M
Sbjct: 174 DVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREML 233
Query: 120 QRDL-----------------------------VSWN-----------VMISGYVRNKSL 139
L VS N +I Y + +
Sbjct: 234 SLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYI 293
Query: 140 SAARNLFEMMP-KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
A ++F + +R++ WN+M+SG A +G A A IF M +E NEI++ GLL+
Sbjct: 294 ENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLST 353
Query: 195 YVQNGRIEEACMLFES-----KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEV 248
G +EE FES K + + ++ F + RL DA + MP D +
Sbjct: 354 CSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLL 413
Query: 249 SWNTMITGYAQNNYL----AEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
+W +++ ++ ++ + A R E AP D ++ + + Y + G+ D+ I
Sbjct: 414 AWKAILSASMKHGHIEIGKSAALRAIELAP-DDSSSYVLLSNIYAKAGRWDDVAKI 468
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/640 (35%), Positives = 351/640 (54%), Gaps = 83/640 (12%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD-- 277
NSLM +V L DAK IF P ++ VSW +I+G A+N+ EA +F E + +
Sbjct: 60 NSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFK 119
Query: 278 -------------------------------------VFTWTAMVSGYVQNGKVDEARMI 300
VF TA+V Y + G + AR +
Sbjct: 120 PNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQL 179
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMI------------ 347
F++M E+N VSWNA+++GY + A +LF M K + + T++
Sbjct: 180 FESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL 239
Query: 348 ------------TGYAQSGEITHARNLFDRMPQHDCI----------------SWAAIIA 379
TGY I A L D H+C+ +W ++
Sbjct: 240 QVGTGIHGFIIRTGYENDKHIKTA--LMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLT 297
Query: 380 GYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
G++ + + +++ F +M +L+ +LS+C++ +L+ G+++H +K F
Sbjct: 298 GFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFA 357
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
FVG+A++ MY CG++E+A F + +KDV+ WN MIAG +G+G DA+ LF M
Sbjct: 358 NNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGR 558
K G+ PD+ T V +L ACSH G+V +G + FY M + IPN +HY C++D+LGRAG+
Sbjct: 418 KGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQ 477
Query: 559 LDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL 618
LD A + + NMPF+PD + LLGACR++G +L + ++ IFEMEP +AG YVLLSN+
Sbjct: 478 LDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNM 537
Query: 619 YAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEEL 678
YA +G W V R +R + +KK G+S +E+ +++TF G+ HP+ +I L+ L
Sbjct: 538 YALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGL 597
Query: 679 EFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVC 738
K+K+ G+V +T ++L DV ++ K+ +L +HSEK+A+A+G++ G IR+ KNLR C
Sbjct: 598 ILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTC 657
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+A K +SK+ GR+++++D NRFH F G CSC DYW
Sbjct: 658 NDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/521 (23%), Positives = 222/521 (42%), Gaps = 78/521 (14%)
Query: 29 PANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALH--VFNS 86
P N N Y RHL+S + P + Q + +I +++ +H + S
Sbjct: 3 PVNFNFY-------RHLSSNPTQRLCP-----LAQSHASILRKLKDLKPLQQIHAQIITS 50
Query: 87 MPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF 146
++ N++++ Y+ G L A+Q+F P +++VSW ++ISG +N A ++F
Sbjct: 51 GLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVF 110
Query: 147 EMMP----KRDVVSWNTMLSG-----------------------------------YAQN 167
M K + V+ +++L Y++
Sbjct: 111 REMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF 170
Query: 168 GYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-SKANWEVVSWNSLMGGF 226
G AR++F+ M E+N +SWN +++ Y +G EEA LF + +V + ++M
Sbjct: 171 GCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLI 230
Query: 227 VKQKRLGDAK-------WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
+G + +I D+ ++ Y +N + +A R+F E VKDV
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVA 290
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI----------AGYVQTKRMDMAR 329
WT M++G+ D A F+ M + ++++ +G +Q R A
Sbjct: 291 AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHAL 350
Query: 330 ELFEAMTC--KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ TC N+ + +I YA G + A+ F M + D + W A+IAG +GY
Sbjct: 351 AI---KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYG 407
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
D++ LF++MK G + S F SVL C++ + G Q+ +VK + A
Sbjct: 408 TDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYAC 467
Query: 448 LV-MYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++ + + G ++ AY + D ++T++ HG
Sbjct: 468 VIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 414 STCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVI 473
S L L+ +Q+H Q++ G F+ N+L+ Y CG + +A F K+V+
Sbjct: 29 SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVV 88
Query: 474 SWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE--KGTEYFY 531
SW +I+G A++ +A+ +F M KP+ +T+ +L A ++ GL+ K F+
Sbjct: 89 SWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
G N T +VD+ + G + A+ L ++M E + +W A++ +G +
Sbjct: 149 VRG---GFEGNVFVETALVDMYSKFGCMGVARQLFESMS-ERNVVSWNAIVSGYSDHGFS 204
Query: 592 ELA 594
E A
Sbjct: 205 EEA 207
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/574 (37%), Positives = 327/574 (56%), Gaps = 45/574 (7%)
Query: 250 WNTMITGYAQNNYLAEAQR----LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
++ ++ L E QR + + + + T ++ Y + +++AR + D MP
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCKN--------- 339
EKN VSW AMI+ Y QT A +F M +C
Sbjct: 114 EKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQ 173
Query: 340 ----VASWN---------TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ WN +++ YA++G+I AR +F+ +P+ D +S AIIAGYAQ G
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGL 233
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
E++L +F ++ G R N + S+L+ + LA L+ GKQ H +++ + N+
Sbjct: 234 DEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 293
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKP 505
L+ MY KCG++ A F+ + ++ ISWN M+ GY++HG G++ L LF M+ +KP
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 353
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
D +T++ +LS CSH + + G + M +YG+ P+++HY C+VD+LGRAGR+DEA
Sbjct: 354 DAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFE 413
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
+K MP +P A G+LLGACR++ ++ E + E+EPENAG YV+LSNLYA++GR
Sbjct: 414 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGR 473
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W DV+ VR M + V K G SW++ + +H F D HP ++ + A ++E+ K+KQ
Sbjct: 474 WEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 533
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
G+V VL+DV EE+KE ML HSEKLA+ +G+++ G PIRV KNLR+C DCHN
Sbjct: 534 AGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNF 593
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K SK+ R + LRD NRFH G CSCGDYW
Sbjct: 594 AKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 140/325 (43%), Gaps = 60/325 (18%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD------------- 122
C + A V + MP ++ VS+ AMIS Y G A VF +M + D
Sbjct: 101 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLT 160
Query: 123 -----------------LVSWNV---------MISGYVRNKSLSAARNLFEMMPKRDVVS 156
+V WN ++ Y + + AR +FE +P+RDVVS
Sbjct: 161 SCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVS 220
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA-----AYVQNGRIEEACML 207
+++GYAQ G + A +F R+ + N +++ LL A + +G+ + C +
Sbjct: 221 CTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGK-QAHCHV 279
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + V NSL+ + K L A+ +FD MP R +SWN M+ GY+++ E
Sbjct: 280 LRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVL 339
Query: 268 RLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAMP------EKNTVSWNAMI 316
LF +E VK D T A++SG D I+D M + +T + ++
Sbjct: 340 ELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIV 399
Query: 317 AGYVQTKRMDMARELFEAMTCKNVA 341
+ R+D A E + M K A
Sbjct: 400 DMLGRAGRIDEAFEFIKRMPSKPTA 424
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 146/324 (45%), Gaps = 34/324 (10%)
Query: 103 LLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK---------SLSAARNLFEMMPKRD 153
LLN LD Q ++ + + Y+R + L AR + + MP+++
Sbjct: 57 LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 116
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
VVSW M+S Y+Q G++ A +F M+ +++ N A V I + + + +
Sbjct: 117 VVSWTAMISRYSQTGHSSEALSVFAEMM-RSDGKPNEFTFATVLTSCIRASGLALGKQIH 175
Query: 214 WEVVSWN---------SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+V WN SL+ + K ++ +A+ IF+ +P RD VS +I GYAQ
Sbjct: 176 GLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDE 235
Query: 265 EA----QRLFEEAPVKDVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
EA QRL E + T+ ++++ + +GK ++ +P V N++
Sbjct: 236 EALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP-FYAVLQNSL 294
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF-----DRMPQHD 370
I Y + + A+ LF+ M + SWN M+ GY++ G LF ++ + D
Sbjct: 295 IDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 354
Query: 371 CISWAAIIAGYAQSGYSEDSLRLF 394
++ A+++G + + L ++
Sbjct: 355 AVTLLAVLSGCSHGKMEDTGLSIY 378
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
+EM G + + ++L+ C + +L G+++H ++K + ++ LL+ Y K
Sbjct: 39 LLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGK 98
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
C +E+A +E+ +K+V+SW MI+ Y++ G +AL +F M KP++ T +
Sbjct: 99 CDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATV 158
Query: 514 LSACSHTGLVEKGTE---YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
L++C + G + N D + S ++D+ +AG+++EA+ + + +P
Sbjct: 159 LTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSS----LLDMYAKAGQIEEAREIFECLP 214
Query: 571 FEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM---YVLLSNLYAA 621
E D + A++ Y + L E+A E+ ++ E GM YV ++L A
Sbjct: 215 -ERDVVSCTAIIAG---YAQLGLDEEALEMFQRLQSE--GMRPNYVTYASLLTA 262
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQVF 115
D+ I + + G + AL +F + R + V+Y ++++ LD +Q
Sbjct: 217 DVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAH 276
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ +R+L V N +I Y + +LS A+ LF+ MP+R +SWN ML GY+++G
Sbjct: 277 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGR 336
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNG 199
+F M ++ + + + V +G
Sbjct: 337 EVLELFRLMRDEKRVKPDAVTLLAVLSG 364
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/784 (32%), Positives = 398/784 (50%), Gaps = 82/784 (10%)
Query: 52 KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA 111
+ P +R +A + G A + + MPRR++VSYN +IS Y G A
Sbjct: 27 RAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRA 86
Query: 112 RQVFDQMP-----QRDLVSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLS 162
+ F + + D ++ ++ R L + + M V N++ S
Sbjct: 87 LETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLAS 146
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSL 222
YA G ARR+FD E +++SWN LL+ YV+ G EE +F S + WNS
Sbjct: 147 MYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVF-SLMCHHGLGWNSF 205
Query: 223 -MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR--LFEEAPVKDVF 279
+G +K +G ++AEA + + D+F
Sbjct: 206 ALGSIIK-----------------------CCASGSDVGRHIAEAVHGCVVKAGLDADLF 242
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY-------------------- 319
+AM+ Y + G + A +F ++P+ N + +NAMIAG+
Sbjct: 243 LASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYS 302
Query: 320 -VQTKRMDMARELFEAM--TCKNVASW----------------------NTMITGYAQSG 354
+Q++ M + F ++ C + + +I Y+ SG
Sbjct: 303 EMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSG 362
Query: 355 EITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ F +P+ D ++W ++I+G Q+ E +LRLF E YG + + +SV++
Sbjct: 363 CMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMN 422
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA+LA G+Q+ +K GF +GN+ + M + G V+ F+E+ +DV+S
Sbjct: 423 ACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVS 482
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
W+ +I+ +A+HG +DAL +F M + P+++T + +L+ACSH GLV+ G Y+ M
Sbjct: 483 WSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMK 542
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
+YG+ P KH TC+VDLLGRAGRL +A+ +++ F DA W +LL +CR++G E
Sbjct: 543 NEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERG 602
Query: 595 EKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNK 654
+ A+ I ++EP ++ YV+L N+Y +G SK R M++RGVKK G SW+E+++
Sbjct: 603 QLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSG 662
Query: 655 VHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKL 714
VH+F GD HPE + IY L E+ K+++ + + E ++++ HSEK+
Sbjct: 663 VHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSE-QNLVGCHSEKI 721
Query: 715 AVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSC 774
AVA+G++ +P PIRVMKNLRVC DCH+ +K IS R IILRD RFHHF GGSCSC
Sbjct: 722 AVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSC 781
Query: 775 GDYW 778
GDYW
Sbjct: 782 GDYW 785
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 10/178 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA---FE 465
+ +L +C L + +H + + A F+ N+LL YC+ G V HA +
Sbjct: 5 YLDLLRSCTALPHV---AAVHAHIARAHPTASLFLRNSLLAAYCRLG-VGAPLHAARLID 60
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLF-ESMKTVGIKPDDITMVGILSACSHTGLVE 524
E+ ++ +S+N +I+ Y+R G AL F + G++ D T L+ACS +
Sbjct: 61 EMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLR 120
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
G + ++M G+ + + G + EA+ + + E D +W +LL
Sbjct: 121 TG-KAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVF-DAAEEHDDVSWNSLL 176
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/638 (35%), Positives = 351/638 (55%), Gaps = 79/638 (12%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD-- 277
NSLM +V L DAK IF P ++ VSW +I+G A+N+ EA +F E + +
Sbjct: 60 NSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFK 119
Query: 278 -------------------------------------VFTWTAMVSGYVQNGKVDEARMI 300
VF TA+V Y + G + AR +
Sbjct: 120 PNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQL 179
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMI------------ 347
F++M E+N V+WNA+++GY + A +LF M K + + T++
Sbjct: 180 FESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL 239
Query: 348 ------------TGYAQSGEI---------TH-----ARNLFDRMPQHDCISWAAIIAGY 381
TGY I +H A +F M D +W ++ G+
Sbjct: 240 QVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGF 299
Query: 382 AQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
+ + + +++ F +M +L+ +LS+C++ +L+ G+++H +K F
Sbjct: 300 SSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANN 359
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
FVG+A++ MY CG++E+A F + +KDV+ WN MIAG +G+G DA+ LF MK
Sbjct: 360 IFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKG 419
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G+ PD+ T V +L ACSH G+V +G + FY M + VIPN +HY C++D+LGRAG+LD
Sbjct: 420 SGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLD 479
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
A + + NMPF+PD + LLGACR++G +L + ++ IFEMEP +AG YVLLSN+YA
Sbjct: 480 AAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYA 539
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
+G W V R +R + +KK G+S +E+ +++TF G+ HP+ +I L+ L
Sbjct: 540 LAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLIL 599
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
K+K+ G+V +T ++L DV ++ K+ +L +HSEK+A+A+G++ IR+ KNLR C+D
Sbjct: 600 KIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDD 659
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH A K +SK+ GR+++++D NRFH F G CSC DYW
Sbjct: 660 CHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 175/418 (41%), Gaps = 91/418 (21%)
Query: 108 LDPARQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSG 163
L P +Q+ Q+ L N +++ YV L+ A+ +F P ++VVSW ++SG
Sbjct: 37 LKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISG 96
Query: 164 YAQNGYADAARRIFDRML----EKNEISWNGLLAAYVQNG--RIEEACMLFESKANWE-- 215
A+N A +F M+ + N ++ + +L A+ G RI ++ F + +E
Sbjct: 97 LAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN 156
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----E 271
V +L+ + K +G A+ +F+ M R+ V+WN +++GY+ + + EA LF
Sbjct: 157 VFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRR 216
Query: 272 EAPVKDVFTW-----------------------------------TAMVSGYVQNGKVDE 296
+ + D +T TA++ YV + VD+
Sbjct: 217 KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDD 276
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM--------------------- 335
A +F M K+ +W M+ G+ + D A + F M
Sbjct: 277 AHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCS 336
Query: 336 -----------------TC--KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
TC N+ + +I YA G + A+ F M + D + W A
Sbjct: 337 HSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNA 396
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+IAG +GY D++ LF++MK G + S F SVL C++ + G Q+ +VK
Sbjct: 397 MIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK 454
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI 467
P S+L +L L+ Q+H Q++ G F+ N+L+ Y CG + +A F
Sbjct: 26 PHASILRKLKDLKPLQ---QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82
Query: 468 VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE--K 525
K+V+SW +I+G A++ +A+ +F M KP+ +T+ +L A ++ GL+ K
Sbjct: 83 PYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
F+ G N T +VD+ + G + A+ L ++M E + TW A++
Sbjct: 143 SVHCFWVRG---GFEGNVFVETALVDMYSKFGCMGVARQLFESMS-ERNVVTWNAIVSGY 198
Query: 586 RLYGKTELA 594
+G +E A
Sbjct: 199 SDHGFSEEA 207
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 120/276 (43%), Gaps = 23/276 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV----SYNAMISGYLLNGQLDPARQVF 115
++ WN ++ + +G + A+ +FN M R+ + + ++I L G L +
Sbjct: 187 NVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIH 246
Query: 116 DQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + D ++ YV + + A +F M +DV +W ML+G++ + D
Sbjct: 247 GFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWD 306
Query: 172 AARRIFDRM-----LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNS 221
A + F++M L+ + I+ G+L++ +Q GR A + AN + ++
Sbjct: 307 RAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFAN-NIFVGSA 365
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----D 277
++ + L DAK F M +D V WN MI G N Y +A LF + D
Sbjct: 366 VIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPD 425
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
T+ +++ G V E IF M + + V N
Sbjct: 426 ESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPN 461
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/480 (42%), Positives = 302/480 (62%), Gaps = 7/480 (1%)
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+K+ +++ Y + A +F+ K++ +WN+++ YA++G I HAR LFD
Sbjct: 93 DKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDE 152
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK--RYGERL---NRSPFTSVLSTCANLA 420
MP+ + ISW+ +I GY G +++L LF EM+ + E N+ ++VLS C L
Sbjct: 153 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLG 212
Query: 421 SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMI 479
+LE GK +H + K G E +G AL+ MY KCGS+E A F+ + KDV +++ MI
Sbjct: 213 ALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMI 272
Query: 480 AGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
A +G + +F M T I P+ +T VGIL AC H GL+ KG YF M ++G
Sbjct: 273 CCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFG 332
Query: 539 VIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAA 598
+ P+ +HY CMVDL GR+G + EA++ + +MP EPD WG+LL R+ G + E A
Sbjct: 333 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 392
Query: 599 EVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTF 658
+ + E++P N+G YVLLSN+YA +GRW +V ++R +M +G+KKV G S++EV+ VH F
Sbjct: 393 KRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEF 452
Query: 659 SVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAY 718
VGD E +RIYA LEE+ +L++ G+V TK VL D+ E++KE L YHSEKLA+A+
Sbjct: 453 VVGDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIAF 512
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++ G P+R++KNLR+C DCH +K ISK+ R I++RD NRFHHFS GSCSC D+W
Sbjct: 513 CLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSDGSCSCRDFW 572
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 41/321 (12%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++++ Y G L A ++FD+ +DL +WN +++ Y + ++ AR LF+ MP+R+V+
Sbjct: 100 TSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVI 159
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
SW+ +++GY G A +F M ++ + +F S +
Sbjct: 160 SWSCLINGYVMCGKYKEALDLFREM-------------------QLPKPNEVFVSPNKFT 200
Query: 216 VVSWNSLMGGFVKQKRLGDAKWI---FDRMPVRDEVSWNT-MITGYAQNNYLAEAQRLFE 271
+ + S G + L KW+ D+ V ++ T +I YA+ L A+R+F+
Sbjct: 201 MSTVLSACG---RLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFD 257
Query: 272 E-APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA-----MIAGYVQTKRM 325
KDV ++AM+ G DE +F M N ++ N+ ++ V +
Sbjct: 258 ALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLI 317
Query: 326 DMARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIA 379
+ + F+ MT ++ + M+ Y +SG I A + MP + D + W ++++
Sbjct: 318 NKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 377
Query: 380 GYAQSG---YSEDSLRLFIEM 397
G G E +L+ IE+
Sbjct: 378 GSRMLGDIKTCEGALKRLIEL 398
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
+ ++ M+ + + F +L + N L LG++ H Q++ G + FV +LL M
Sbjct: 46 ISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 105
Query: 451 YCKCGSVEEAYHAFEEIVDKD-------------------------------VISWNTMI 479
Y CG + A F+E V KD VISW+ +I
Sbjct: 106 YSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLI 165
Query: 480 AGYARHGFGKDALMLFESMKT-----VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMN 534
GY G K+AL LF M+ V + P+ TM +LSAC G +E+G ++ +S
Sbjct: 166 NGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQG-KWVHSYI 224
Query: 535 RDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELA 594
YGV + T ++D+ + G L+ A+ + + + D + A++ +YG L
Sbjct: 225 DKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYG---LT 281
Query: 595 EKAAEVIFEMEPEN 608
++ +V EM N
Sbjct: 282 DECFQVFSEMTTSN 295
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 154/383 (40%), Gaps = 57/383 (14%)
Query: 126 WNVMISGYVRNKS-------LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFD 178
WN++I V N S +S + D ++ +L + + +R
Sbjct: 26 WNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHA 85
Query: 179 RML----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGD 234
++L +K+ LL Y G + A +F+ + ++ +WNS++ + K +
Sbjct: 86 QILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINH 145
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV---------KDVFTWTAMV 285
A+ +FD MP R+ +SW+ +I GY EA LF E + + FT + ++
Sbjct: 146 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVL 205
Query: 286 SGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
S + G +++ + + + E + V A+I Y + ++ A+ +F+A+ K
Sbjct: 206 SACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKK-- 263
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
D +++A+I A G +++ ++F EM
Sbjct: 264 ----------------------------DVKAYSAMICCLAMYGLTDECFQVFSEMTTSN 295
Query: 402 E-RLNRSPFTSVLSTCANLASLELGKQLHGQLV-KVGFEAGCFVGNALLVMYCKCGSVEE 459
N F +L C + + GK + + G ++ +Y + G ++E
Sbjct: 296 NINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKE 355
Query: 460 AYHAFEEI-VDKDVISWNTMIAG 481
A + ++ DV+ W ++++G
Sbjct: 356 AESFIASMPMEPDVLIWGSLLSG 378
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 159/354 (44%), Gaps = 47/354 (13%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNV 128
+M + C D SAL +F+ + ++N++++ Y G ++ AR++FD+MP+R+++SW+
Sbjct: 104 NMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSC 163
Query: 129 MISGYVRNKSLSAARNLFEMM--PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
+I+GYV A +LF M PK + V + N+
Sbjct: 164 LINGYVMCGKYKEALDLFREMQLPKPNEV------------------------FVSPNKF 199
Query: 187 SWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+ + +L+A + G +E+ + + ++V +L+ + K L AK +FD +
Sbjct: 200 TMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDAL 259
Query: 243 PVRDEV-SWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDE 296
+ +V +++ MI A E ++F E + T+ ++ V G +++
Sbjct: 260 GSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINK 319
Query: 297 ARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGY 350
+ F M E+ ++ + M+ Y ++ + A +M + +V W ++++G
Sbjct: 320 GKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 379
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIA---GYAQSGYSEDSLRLFIEMKRYG 401
G+I R+ + D ++ A + YA++G + R+ EM+ G
Sbjct: 380 RMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKG 433
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 156/370 (42%), Gaps = 33/370 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM- 118
D+ WN + + + G + A +F+ MP R+ +S++ +I+GY++ G+ A +F +M
Sbjct: 126 DLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 185
Query: 119 ---PQRDLVSWN-----VMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQ 166
P VS N ++S R +L + + + K D+V ++ YA+
Sbjct: 186 LPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAK 245
Query: 167 NGYADAARRIFDRMLEKNEI-SWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWN 220
G + A+R+FD + K ++ +++ ++ G +E +F + N V++
Sbjct: 246 CGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFV 305
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPV 275
++G V + + K F M ++ + M+ Y ++ + EA+ P+
Sbjct: 306 GILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 365
Query: 276 K-DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA---GYVQTKRMDMAREL 331
+ DV W +++SG G + + E + ++ A + Y +T R + +
Sbjct: 366 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRI 425
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA---AIIAGYAQSGYSE 388
M K + Y + + H + D Q +A I+ ++GY
Sbjct: 426 RHEMEVKGIKKVPG--CSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVS 483
Query: 389 DSLRLFIEMK 398
D+ + ++++
Sbjct: 484 DTKEVLLDLE 493
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/677 (34%), Positives = 373/677 (55%), Gaps = 44/677 (6%)
Query: 111 ARQVFDQMPQRDLVSWNV-MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
AR++ + +P+R LV+ ++GY R + A MP D ++ +L A+
Sbjct: 8 ARRLLEGIPRRCLVAAREDAVAGYARMLARGA-------MP--DAYTFPPLLKAVARGSS 58
Query: 170 ADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
A R + +++ +N L+ AY G A L + V WN+L+ G
Sbjct: 59 AAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISG 118
Query: 226 FVKQKRLGDAKWIFDRMP----VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTW 281
+ +R G+A F M V++ ++++ + DV
Sbjct: 119 HNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGT--------------GDVLL- 163
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
G +G+V + ++ D E NA++ Y + M+ A +LF+ M ++V
Sbjct: 164 -----GMQVHGRVVGSGVLPDLRVE------NALVDMYAECADMESAWKLFDGMQVRSVV 212
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
SW ++++G + G + AR+LF RMP+ D +SW A+I GY Q+ ++L +F EM+
Sbjct: 213 SWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSN 272
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ SV++ CA L +LE+G+ + + + G + FVGNAL+ MY KCGS+E A
Sbjct: 273 VSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERAL 332
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+++ +D +W +I G A +G+G++A+ +F M V PD++T +G+L+AC+H G
Sbjct: 333 DVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAG 392
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LV+KG E+F SM Y + PN HY C++DL GRAG++ EA + + MP P++ WG L
Sbjct: 393 LVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTL 452
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
L ACR++G +E+ E E + +M+PEN+ +Y LLSN+YA RW DV ++R + ++G+K
Sbjct: 453 LAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIK 512
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G S +E+ +H F GD HP IY LE + L G+ V +V EE
Sbjct: 513 KEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEE 572
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
EK+ +L +HSEKLA+A+ +LS IR++KNLR+C DCHNAIK IS++ GR +++RD
Sbjct: 573 EKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDR 632
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHHF G CSC DYW
Sbjct: 633 TRFHHFRHGFCSCKDYW 649
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 141/338 (41%), Gaps = 62/338 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+R N + + +SA +F+ M RS VS+ +++SG G++D AR +F +MP
Sbjct: 179 DLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMP 238
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+RD VSW MI GYV+ A +F M +V
Sbjct: 239 ERDTVSWTAMIDGYVQAARFREALEMFREMQCSNV------------------------- 273
Query: 180 MLEKNEISWNGLLAAYVQNGRIE--EACMLFESKANWEVVSW--NSLMGGFVKQKRLGDA 235
+E + ++ A Q G +E E ++ S+ ++ ++ N+L+ + K + A
Sbjct: 274 --SADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERA 331
Query: 236 KWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE----APVKDVFTWTAMVSGYVQN 291
+F M RD+ +W +I G A N Y EA +F + D T+ +++
Sbjct: 332 LDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHA 391
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
G VD+ R F +M E ++ NV + +I +
Sbjct: 392 GLVDKGREFFLSMRETYNIA--------------------------PNVVHYGCIIDLFG 425
Query: 352 QSGEITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSE 388
++G+IT A + D+MP + W ++A G SE
Sbjct: 426 RAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSE 463
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 127/325 (39%), Gaps = 63/325 (19%)
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
HAR L + +P+ C+ A ED++ + M G + F +L A
Sbjct: 7 HARRLLEGIPRR-CLVAA-----------REDAVAGYARMLARGAMPDAYTFPPLLKAVA 54
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+S + +H +VK G V +L+ Y G A E + WN
Sbjct: 55 RGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNA 114
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH-TGLVEKGTEYFYSMNRD 536
+I+G+ R +A F M G P +T V +LSAC TG V G + +
Sbjct: 115 LISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQ-VHGRVVG 173
Query: 537 YGVIPNSKHYTCMVDL-------------------------------LGRAGRLDEAQNL 565
GV+P+ + +VD+ L R GR+DEA++L
Sbjct: 174 SGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDL 233
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPEN--AGMYVLLSNLYAAS- 622
MP E D +W A++ Y + +A E+ EM+ N A + ++S + A +
Sbjct: 234 FGRMP-ERDTVSWTAMIDG---YVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 623 ------GRWGDVSKVRLKMRDRGVK 641
G W VR+ M +G+K
Sbjct: 290 LGALEMGEW-----VRVYMSRQGIK 309
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/608 (37%), Positives = 360/608 (59%), Gaps = 49/608 (8%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEEAPV 275
N L+ KQ L A + P + ++ +I N L +AQR L E
Sbjct: 43 NKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFD 102
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM-----IAGYVQT-----KRM 325
+D F T +++ Y +D AR +FD + +NA+ +AG+ + +RM
Sbjct: 103 QDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRM 162
Query: 326 D------------------MARELFEAMTCKN---------------VASWNTMITGYAQ 352
+ +A E F ++ K V T++ YA+
Sbjct: 163 NSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAK 222
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL--NRSPFT 410
G +++A +F++MP + +SW+A+IA YA++G + ++L LF E+ + L N
Sbjct: 223 FGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMV 282
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
SVL CA LA+LE G+ +HG +++ G ++ V +AL+ MY +CG +E F+++ +
Sbjct: 283 SVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKR 342
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
DV+SWN++I+ Y HGFGK A+ +FE M G++P I+ V +L ACSH GLV++G F
Sbjct: 343 DVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLF 402
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
SM+ +G+ P+ +HY CMVDLLGRA RL+EA +++NM EP WG+LLG+CR++
Sbjct: 403 NSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCN 462
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
ELAE+A+ +F++EP NAG YVLL+++YA +G W V +V+ + RG++KV G SW+E
Sbjct: 463 VELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIE 522
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
V+ K+++F D ++P ++++A L +L +LK++G+V TK+VL+D+ EKE ++ H
Sbjct: 523 VKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGH 582
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SEKLAVA+G+++ G IR+ K+LR+CEDCH+ K ISK + I++RD NRFHHF G
Sbjct: 583 SEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDG 642
Query: 771 SCSCGDYW 778
CSCGDYW
Sbjct: 643 VCSCGDYW 650
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 64/334 (19%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ--MPQRDLVS 125
+ + + GC +A VFN MP ++ VS++AMI+ Y NG+ A ++F + + +DL
Sbjct: 217 VDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCP 276
Query: 126 WNV-------------------MISGYVRNKSLSA--------------------ARNLF 146
+V +I GY+ K L + + +F
Sbjct: 277 NSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVF 336
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIE 202
+ M KRDVVSWN+++S Y +G+ A IF+ M +E + IS+ +L A G ++
Sbjct: 337 DQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVD 396
Query: 203 EACMLFESK-----ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITG 256
E MLF S V + ++ + RL +A I + M + W +++
Sbjct: 397 EGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGS 456
Query: 257 --YAQNNYLAE--AQRLFEEAP--------VKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
N LAE + RLF+ P + D++ M G + K+ EAR + +
Sbjct: 457 CRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGL-QKV 515
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
P ++ + I +V ++ E A+ K
Sbjct: 516 PGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVK 549
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF-DRMLEKNEIS 187
++ Y + +S A +F MP ++VVSW+ M++ YA+NG A A +F + MLE ++
Sbjct: 216 LVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLC 275
Query: 188 WNGLLAAYV----------QNGRIEEACMLFES-KANWEVVSWNSLMGGFVKQKRLGDAK 236
N + V + GR+ +L + + V+S +L+ + + +L +
Sbjct: 276 PNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVIS--ALVTMYARCGKLELGQ 333
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNG 292
+FD+M RD VSWN++I+ Y + + +A +FEE V ++ +++ G
Sbjct: 334 RVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAG 393
Query: 293 KVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM 335
VDE +M+F++M + + + M+ + R++ A ++ E M
Sbjct: 394 LVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENM 441
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 141/331 (42%), Gaps = 53/331 (16%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ----RDLVSWNVMISGY 133
D+A VF+ R+ YNA+ L G + ++ +M D ++ ++
Sbjct: 122 DNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKAC 181
Query: 134 VRNKS----LSAARNLFEMMPKRD----VVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
V ++ L+ R + + + V T++ YA+ G A +F++M KN
Sbjct: 182 VASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNV 241
Query: 186 ISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNS--------------------LMG 224
+SW+ ++A Y +NG+ EA LF E + + NS L+
Sbjct: 242 VSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIH 301
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
G++ +K L +PV + ++T YA+ L QR+F++ +DV +W ++
Sbjct: 302 GYILRKGLDSI------LPV-----ISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSL 350
Query: 285 VSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAM----- 335
+S Y +G +A IF+ M E + +S+ +++ +D + LF +M
Sbjct: 351 ISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHG 410
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRM 366
C +V + M+ ++ + A + + M
Sbjct: 411 ICPSVEHYACMVDLLGRANRLEEAAKIIENM 441
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/608 (37%), Positives = 353/608 (58%), Gaps = 23/608 (3%)
Query: 188 WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-- 245
WNGLL+A+ + G A +F + + + + RLGD + + VR
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSARPNSTTFTLTLTACARLGDLD-AAESVRVRAF 134
Query: 246 ------DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARM 299
D + ++ Y++ + EA R+F+ P KD W+ MV+G+V G+ EA
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 300 IFDAMPEKNTVSWNAMIAGYVQT------KRMDMA---RELFEAMTCKNVASWNTMITGY 350
++ M E ++ G +Q R+ + R L M +V + ++++ Y
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMR-MDVVTTTSLVSMY 253
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A++G + A +F MP + ++W+A+I+G+AQ+G + ++L LF E++ G +
Sbjct: 254 AKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALV 313
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
S L CA++ L+LGK +HG +++ E C +G A+L MY KCGS+E A F ++ +
Sbjct: 314 SALLACASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSR 372
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D++ WN +IA HG G DAL LF+ + GIKPD T +LSA SH+GLVE+G +F
Sbjct: 373 DLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWF 432
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
M +++G+ P KHY C+VDLL R+G ++EA +++ +M EP A W LL C K
Sbjct: 433 DRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKK 492
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
EL E A+ I E+ PE+ G+ L+SNLYAA+ +W V ++R M+D G KKV GYS +E
Sbjct: 493 LELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIE 552
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYH 710
V+ H F + D HP+ I + +L ++++ G+V T+ V HD+ E++ +L YH
Sbjct: 553 VKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQ---LLSYH 609
Query: 711 SEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGG 770
SE+LA+A+G+L+ G + ++KNLRVC DCH+AIK+ISKIV R I++RD RFHHF G
Sbjct: 610 SERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDG 669
Query: 771 SCSCGDYW 778
+CSCGDYW
Sbjct: 670 ACSCGDYW 677
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 217/487 (44%), Gaps = 79/487 (16%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMP---RRSSVSYNAMISGYLLNGQLDPARQV----FD 116
WN ++ H R G +AL VF ++P R +S ++ ++ G LD A V F
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAFA 135
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
D+ + ++ Y R ++ A +F+ MP++D V+W+TM++G+ G A +
Sbjct: 136 AGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAM 195
Query: 177 FDRMLE----KNEISWNGLLAAYVQ----------NGRIEEACMLFESKANWEVVSWNSL 222
+ RM E +E+ G++ A + +GR+ CM +VV+ SL
Sbjct: 196 YSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCM------RMDVVTTTSL 249
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV--FT 280
+ + K L A +F MP R++V+W+ +I+G+AQN EA LF E + +
Sbjct: 250 VSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCS 309
Query: 281 WTAMVS--------GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
W A+VS G+++ GK ++ E + A++ Y + ++ AR+LF
Sbjct: 310 W-ALVSALLACASVGFLKLGKSIHGFIL--RRLEWQCILGTAVLDMYSKCGSLESARKLF 366
Query: 333 EAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
++ +++ WN AIIA G D+L
Sbjct: 367 NKLSSRDLVLWN-------------------------------AIIACCGTHGCGHDALA 395
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMY 451
LF E+ G + + + F S+LS ++ +E GK +++K G E ++ +
Sbjct: 396 LFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLL 455
Query: 452 CKCGSVEEAYHAFEEIVDKDVIS-WNTMIAGYARHGFGKDALMLFESM--KTVGIKPDDI 508
+ G VEEA + + I+ W +++G L L E++ K + ++P+DI
Sbjct: 456 ARSGLVEEANDMLASMQTEPTIAIWVILLSGC----LNNKKLELGETIAKKILELRPEDI 511
Query: 509 TMVGILS 515
++ ++S
Sbjct: 512 GVLALVS 518
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 172/372 (46%), Gaps = 66/372 (17%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ + + + R G + A+ VF+ MPR+ V+++ M++G++ G+ A ++ +M
Sbjct: 141 DVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMR 200
Query: 120 QRDLVSWNVMISGYVR------NKSLSAARN--LFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ + V++ G ++ N + A+ + L + DVV+ +++S YA+NG+ D
Sbjct: 201 EHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLD 260
Query: 172 AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE-------SKANWEVVS------ 218
A ++F M +N+++W+ L++ + QNGR EA LF +W +VS
Sbjct: 261 VACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACA 320
Query: 219 --------------------WNSLMGGFV-----KQKRLGDAKWIFDRMPVRDEVSWNTM 253
W ++G V K L A+ +F+++ RD V WN +
Sbjct: 321 SVGFLKLGKSIHGFILRRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAI 380
Query: 254 I----TGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----- 304
I T ++ LA Q L E D T+ +++S +G V+E + FD M
Sbjct: 381 IACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFG 440
Query: 305 ---PEKNTVSWNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYAQSGEI---- 356
EK+ V ++A ++ ++ A ++ +M T +A W +++G + ++
Sbjct: 441 IEPAEKHYVCIVDLLA---RSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLELGE 497
Query: 357 THARNLFDRMPQ 368
T A+ + + P+
Sbjct: 498 TIAKKILELRPE 509
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/527 (41%), Positives = 316/527 (59%), Gaps = 19/527 (3%)
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF--------DAMPEKNTVSWNAMIA 317
A R+F++ P D+ + M GY + D R I +P+ T S +++
Sbjct: 88 AHRMFDKIPQPDIVLFNTMARGYARFD--DPLRAILLCSQVLCSGLLPDDYTFS--SLLK 143
Query: 318 GYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCI 372
+ K ++ ++L + K N+ T+I Y ++ AR +FD++ + +
Sbjct: 144 ACARLKALEEGKQL-HCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVV 202
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQL 432
++ AII A++ ++L LF E++ G + LS+CA L +L+LG+ +H +
Sbjct: 203 AYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYV 262
Query: 433 VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
K GF+ V AL+ MY KCGS+++A F+++ +D +W+ MI YA HG G A+
Sbjct: 263 KKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAI 322
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDL 552
+ MK ++PD+IT +GIL ACSHTGLVE+G EYF+SM +YG++P+ KHY CM+DL
Sbjct: 323 SMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDL 382
Query: 553 LGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
LGRAGRL+EA + +P +P W LL +C +G E+A+ + IFE++ + G Y
Sbjct: 383 LGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDY 442
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
V+LSNL A +GRW DV+ +R M D+G KV G S +EV N VH F GD +H ++
Sbjct: 443 VILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILH 502
Query: 673 AYLEELEFKLKQDGFVYSTKLVLH-DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
L+EL +LK G+V T LV + D+ +EEKE +LRYHSEKLA+ YG+L+ P G IRV
Sbjct: 503 HALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRV 562
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLRVC DCHNA K IS I GR IILRD RFHHF G CSCGDYW
Sbjct: 563 VKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 150/362 (41%), Gaps = 38/362 (10%)
Query: 63 QWNVAITTHMRNGCC--------DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR-- 112
Q N + T + N C D A +F+ +P+ V +N M GY DP R
Sbjct: 63 QNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFD--DPLRAI 120
Query: 113 ----QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGY 164
QV D +++ ++ R K+L + L + K V T+++ Y
Sbjct: 121 LLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMY 180
Query: 165 AQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF----ESKANWEVVSWN 220
DAARR+FD++ E +++N ++ + +N R EA LF ES V+
Sbjct: 181 TACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTML 240
Query: 221 SLMGGFVKQKRLGDAKWIFDRMP---VRDEVSWNT-MITGYAQNNYLAEAQRLFEEAPVK 276
+ L +WI + + V NT +I YA+ L +A +F++ P +
Sbjct: 241 VALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRR 300
Query: 277 DVFTWTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
D W+AM+ Y +G +A R + A + + +++ ++ T ++ E F
Sbjct: 301 DTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYF 360
Query: 333 EAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGY 386
+MT ++ + MI ++G + A D +P + I W +++ + G
Sbjct: 361 HSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGN 420
Query: 387 SE 388
E
Sbjct: 421 VE 422
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK----CGSVEEAYHA 463
P +S+LS SL KQ+ +K + L+ +C S++ A+
Sbjct: 34 PSSSILSLIPKCTSLRELKQIQAYTIKTHQNNPTVLTK--LINFCTSNPTIASMDHAHRM 91
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
F++I D++ +NTM GYAR A++L + G+ PDD T +L AC+ +
Sbjct: 92 FDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKAL 151
Query: 524 EKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
E+G + + + GV N ++++ +D A+ + + EP + A++
Sbjct: 152 EEGKQ-LHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIG-EPCVVAYNAIIT 209
Query: 584 ACRLYGKTELAEKAAEVIFE--MEPENAGMYVLLSN--LYAA--SGRW 625
+C + A + E ++P + M V LS+ L A GRW
Sbjct: 210 SCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRW 257
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 37/186 (19%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
A+I Y G LD A VF MP+RD +W+ MI Y + S A ++ M K V
Sbjct: 275 TALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKV- 333
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW- 214
+ +EI++ G+L A G +EE F S +
Sbjct: 334 --------------------------QPDEITFLGILYACSHTGLVEEGYEYFHSMTHEY 367
Query: 215 ----EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITGYAQNNYLAEA--- 266
+ + ++ + RL +A D +P++ + W T+++ + + + A
Sbjct: 368 GIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLV 427
Query: 267 -QRLFE 271
QR+FE
Sbjct: 428 IQRIFE 433
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/738 (33%), Positives = 377/738 (51%), Gaps = 93/738 (12%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----E 182
N ++S +VR + A N+F M +RD+ SWN ++ GY + G+ D A ++ R+L
Sbjct: 73 NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132
Query: 183 KNEISWNGLLAA------YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
+ ++ +L + V+ + + F+ + +VV N+L+ +VK + A+
Sbjct: 133 PDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVV--NALITMYVKCGDVVSAR 190
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSG----- 287
+FD+MP RD +SWN MI+GY +N+ E LF E + D+ T T+++S
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250
Query: 288 ------------------------------YVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
Y+ G EA +F M ++ VSW +I+
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310
Query: 318 GYVQTKRMDMARELFEAM-----------------TCKN--------------------- 339
G V D A E ++ M C +
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370
Query: 340 -VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
V N++I Y++ I A +F ++P D ISW ++I G + ++L F +M
Sbjct: 371 YVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI 430
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
+ N S LS CA + +L GK++H +K G F+ NA+L +Y +CG +
Sbjct: 431 -LKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMR 489
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A + F + +KDV +WN ++ GYA+ G G + LF+ M I PDD+T + +L ACS
Sbjct: 490 TALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACS 548
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
+G+V +G EYF M +Y + PN KHY C+VDLLGRAG+L+EA ++ MP +PD A W
Sbjct: 549 RSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIW 608
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
GALL ACR++ L E AA+ IF+ + E+ G Y+LL NLYA SG+W +V+KVR M++
Sbjct: 609 GALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEE 668
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
G+ G SW+EV+ KVH F GD HP+ I LE K+K GF + D
Sbjct: 669 GLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGF-NGQECSSMDG 727
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+ K + HSE+ A+AY +++ G PI V KNL +C+ CH+ +K ISKIV R I +
Sbjct: 728 IQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISV 787
Query: 759 RDNNRFHHFSGGSCSCGD 776
RD +FHHF G CSCGD
Sbjct: 788 RDTEQFHHFKDGLCSCGD 805
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 139/272 (51%), Gaps = 7/272 (2%)
Query: 335 MTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
+T +V N +++ + + G++ +A N+F RM + D SW ++ GY ++G+ +++L L+
Sbjct: 64 VTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLY 123
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
+ G R + F SVL +CA L G+++H +V+ F+ V NAL+ MY KC
Sbjct: 124 HRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKC 183
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
G V A F+++ +D ISWN MI+GY + + L LF M+ + I PD +TM ++
Sbjct: 184 GDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVI 243
Query: 515 SACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
SAC G GT+ + Y + Y N Y ++ + G EA+++ M
Sbjct: 244 SACELLGDERLGTQLHSYVVRTAYD--GNISVYNSLIQMYLSVGHWKEAESVFSGMECR- 300
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEME 605
D +W ++ C L +KA E ME
Sbjct: 301 DVVSWTTIISGCV---DNLLPDKALETYKTME 329
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 172/400 (43%), Gaps = 61/400 (15%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF-- 115
D D+ N IT +++ G SA +F+ MP R +S+NAMISGY N + ++F
Sbjct: 167 DMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFR 226
Query: 116 --------DQMPQRDLVS-----------------------------WNVMISGYVRNKS 138
D M ++S +N +I Y+
Sbjct: 227 MRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGH 286
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
A ++F M RDVVSW T++SG N D A + M +E++ +L+A
Sbjct: 287 WKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSA 346
Query: 195 YVQNGRIEEACMLFESKAN----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
G+++ L E VV NSL+ + K KR+ A IF ++P +D +SW
Sbjct: 347 CASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISW 406
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVS--------GYVQNGKVDEARMIFD 302
++I G NN EA F + +K ++S G + GK A +
Sbjct: 407 TSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAHALKA 466
Query: 303 AMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNL 362
M + NA++ YV+ RM A F + K+V +WN ++TGYAQ G+ L
Sbjct: 467 GMGFDGFLP-NAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMEL 524
Query: 363 FDRMPQH----DCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
F RM + D +++ +++ ++SG + L F MK
Sbjct: 525 FKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMK 564
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 180/444 (40%), Gaps = 68/444 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
+ A D +I +N I ++ G A VF+ M R VS+ +ISG + N D A +
Sbjct: 264 RTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALE 323
Query: 114 VFDQMP----------------------QRDL-----------------VSWNVMISGYV 134
+ M Q D+ V N +I Y
Sbjct: 324 TYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYS 383
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
+ K + A +F +P +DV+SW ++++G N A F +M+ K++ + L++A
Sbjct: 384 KCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISA 443
Query: 195 YVQNGRI-------EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE 247
R+ E ++ ++ N+++ +V+ R+ A F+ + +D
Sbjct: 444 LSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDV 502
Query: 248 VSWNTMITGYAQNNYLAEAQRLFE---EAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDA 303
+WN ++TGYAQ A LF+ E+ + D T+ +++ ++G V E F
Sbjct: 503 GAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQR 562
Query: 304 MP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITG-----YAQ 352
M N + ++ + +++ A E E M K + A W ++ +
Sbjct: 563 MKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVL 622
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAG-YAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
GE+ A+++F + + I + ++ YA SG ++ ++ MK G L P S
Sbjct: 623 LGELA-AQHIFKQ--DAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEG--LIVDPGCS 677
Query: 412 VLSTCANLASLELGKQLHGQLVKV 435
+ + + G H Q+ ++
Sbjct: 678 WVEVKGKVHAFLSGDNFHPQMQEI 701
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 318/556 (57%), Gaps = 39/556 (7%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + N ++ YA L A+ LFE P ++V +W + GY++NG + AR +FD MP
Sbjct: 141 DRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP 200
Query: 306 EKNTVSWNAMIAGYVQTKR--------MDMARE------------------LFEAMTCKN 339
E+N +WNAM+AG +DM RE L + +T +
Sbjct: 201 ERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ 260
Query: 340 VASW-------NTMITG------YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
V ++ M G Y + G + + +P +S IIAG Q+G
Sbjct: 261 VHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGD 320
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
SE +L F M+ G + F S +S+C++LA+L G+Q+HGQ++K G + V
Sbjct: 321 SEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTC 380
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY +CG + ++ F D + MI+ Y HG G+ A+ LF+ M G +P
Sbjct: 381 LVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPS 440
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
D+T + +L ACSH+GL E+G + F M + YG+ P+ KHYTC+VDLLGR+G LDEA+ L+
Sbjct: 441 DVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALI 500
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
+MP PD W LL AC+ ++AE+ A+ + E++P ++ YVLLSN+ A S RWG
Sbjct: 501 LSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWG 560
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
DVS+VR MRD V+K G SW+E++ +H F GD HP + I LEE+ K++Q G
Sbjct: 561 DVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCG 620
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+ +VLHD+ +EEKE L +HSEKLA+A+ LS+P G PIRVMKNLRVC+DCH AIK
Sbjct: 621 YSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIK 680
Query: 747 HISKIVGRLIILRDNN 762
+S++ GR I++RD+
Sbjct: 681 LMSQVTGREIVVRDDK 696
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 177/418 (42%), Gaps = 45/418 (10%)
Query: 81 LHVFNSMPRRSSVSYNA--MISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
LH F + ++ + A ++ Y G L AR++F+++P+R+++SWN++ GY++N
Sbjct: 129 LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGD 188
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF-DRMLEKNEISWNGLLAAY-- 195
L AR LF+ MP+R+V +WN M++G G+ + + F D E GL + +
Sbjct: 189 LGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRC 248
Query: 196 ------VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
V GR A + S + ++ +SL +++ L + + + +P VS
Sbjct: 249 CAGLRDVVTGRQVHA-YVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVS 307
Query: 250 WNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
NT+I G QN A F DV T+ + +S A+
Sbjct: 308 CNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSD----------LAALA 357
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDR 365
+ + M AG ++ MTC ++ Y++ G + + +F
Sbjct: 358 QGQQIHGQVMKAG---------VDKVVPVMTC--------LVHMYSRCGCLGDSERVFFG 400
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
D +A+I+ Y G+ + ++ LF +M G + F ++L C++ E G
Sbjct: 401 YCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 460
Query: 426 KQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAG 481
+ K G + ++ + + G ++EA + + D + W T+++
Sbjct: 461 MDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 518
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 148/359 (41%), Gaps = 57/359 (15%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS 138
+A +F +PRR+ +S+N + GY+ NG L AR++FD+MP+R++ +WN M++G
Sbjct: 160 AARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGF 219
Query: 139 LSAARNLFEMMPK--------------------RDVVS-------------------WNT 159
+ F M + RDVV+ ++
Sbjct: 220 DEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSS 279
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWE 215
+ Y + G + + + +S N ++A QNG E A CM+ +
Sbjct: 280 LAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAAD 339
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRM--PVRDEV--SWNTMITGYAQNNYLAEAQRLFE 271
VV++ S + L + I ++ D+V ++ Y++ L +++R+F
Sbjct: 340 VVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFF 399
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDM 327
D F +AM+S Y +G +A +F M E + V++ A++ + +
Sbjct: 400 GYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEE 459
Query: 328 ARELFEAMT-----CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAG 380
+ FE MT +V + ++ +SG + A L MP D + W +++
Sbjct: 460 GMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 518
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 409 FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIV 468
F+ + C L L +QLH G F N L++ Y G + A FE I
Sbjct: 113 FSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 169
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE 528
++V+SWN + GY ++G A LF+ M + + + G+ ++ G E+
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGL----TNLGFDEESLG 225
Query: 529 YFYSMNRDYGVIPN 542
+F M R+ G+ P+
Sbjct: 226 FFLDMRRE-GMHPD 238
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/629 (34%), Positives = 338/629 (53%), Gaps = 90/629 (14%)
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----------------- 276
D + +FD M +++ VSW +I+ YA+N L +A RLF +
Sbjct: 140 DVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCL 199
Query: 277 ----------------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA 314
++ TA+ + YV+ G ++ A+++FD M +N V+W
Sbjct: 200 GPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTG 259
Query: 315 MIAGYVQTKRMDMARELFEAM-----------------TCKNVASWNT------------ 345
++ GY Q K++++A ELF M C + W+
Sbjct: 260 LMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLG 319
Query: 346 ----------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
++ Y + G+I A F R+ + + +SW+A+I+G++QSG ED +++F
Sbjct: 320 AESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFT 379
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
++ G LN +TSV CA A+L +G Q HG +K G + + +A++ MY KCG
Sbjct: 380 SLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCG 439
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
++ A AFE I + D ++W +I+GYA HG +AL F M++ G++P+ +T + +L+
Sbjct: 440 RLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLT 499
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
ACSH+GLV + +Y SM+RDYGV P HY CM+D RAG L EA L+ MPFEPDA
Sbjct: 500 ACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDA 559
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
+W +LLG C + +L + AAE +F ++P + Y+LL NLY+A G+W + VR M
Sbjct: 560 MSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLM 619
Query: 636 RDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVL 695
+R +KK SW+ V+ +VH F VGD HP+ + IY+ LEE + + + S +L
Sbjct: 620 AERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSV-----IDSPVRLL 674
Query: 696 HDVGE------EEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHIS 749
++ + KE +L HSEKLA+A+G++S PI V KNLR C DCH K +S
Sbjct: 675 NEEDDVSCSLSARKEQLLD-HSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVS 733
Query: 750 KIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ GR I++RD+ RFHHF G CSC DYW
Sbjct: 734 MVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/539 (22%), Positives = 228/539 (42%), Gaps = 77/539 (14%)
Query: 22 SINRLQSPANTNPYPSKKTLKRHLNSKSRN-KPKPAGDW--DIRQWNVAITTHMRNGCCD 78
S+ R S T K HL S S+ K K A D+ ++ +V++T H C
Sbjct: 36 SLKRSSSTIKTEKIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQ-CLF 94
Query: 79 SALHVFNSMP---------RRSSVSYNAMISGYLLN-----GQLDPARQVFDQMPQRDLV 124
A S+ RR+ + + I LL G ++VFD+M ++LV
Sbjct: 95 EACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLV 154
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKR-------------------------------- 152
SW ++IS Y +N L A LF M
Sbjct: 155 SWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHV 214
Query: 153 -------DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
++ + + Y + G+ + A+ +FD M +N ++W GL+ Y Q ++E A
Sbjct: 215 IRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVAL 274
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR--------MPVRDEVSWNT-MITG 256
LF ++ E V + + V + G W R + EVS T ++
Sbjct: 275 ELF-ARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDF 333
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSW 312
Y + + A R F + +W+A++SG+ Q+G++++ IF ++ + N+ +
Sbjct: 334 YVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393
Query: 313 NAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHARNLFDRMPQ 368
++ ++M + + + S+ + M+T Y++ G + +AR F+ + +
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
D ++W AII+GYA G + ++L F M+ YG R N F +VL+ C++ + KQ
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 429 HGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
G + + G + + ++ Y + G ++EA + + D +SW +++ G H
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAH 572
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 5/230 (2%)
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
+ ++ G +++ EM + + + C L SL G+ +H +L +
Sbjct: 59 LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118
Query: 438 EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFES 497
+ N LL MYC CGS + F+E++ K+++SW +I+ YA++G + A+ LF
Sbjct: 119 NPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSD 178
Query: 498 MKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG 557
M+ GI+P+ + +L +C +E G + + R + N T + ++ R G
Sbjct: 179 MQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQ-LNANITVETAICNMYVRCG 237
Query: 558 RLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
L+ A+ + M + +A TW L+ Y + + E A E+ M E
Sbjct: 238 WLEGAKLVFDGMDAQ-NAVTWTGLMVG---YTQAKKLEVALELFARMAME 283
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/505 (40%), Positives = 311/505 (61%), Gaps = 8/505 (1%)
Query: 250 WNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
WN+ + A+ + +A LF + D FT ++++ + + R++ +
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 306 E----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARN 361
+ N N ++ Y M AR LFE M ++V +WN MI + G+ A +
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF RMP+ + SW ++IAGY Q G +++++ LF +M+ G + N +VL+ CA+L +
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
L+LG ++H + GF+ + N L+ MY KCG +EEA FEE+ ++ V+SW+ MI G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
A HG ++AL LF M VGI+P+ +T +G+L ACSH GL+ +G +F SM RDYG+IP
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 395
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+HY CMVDLL RAG L EA + NMP +P+ WGALLGACR++ E+AE+A + +
Sbjct: 396 QIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL 455
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
E++P N G YV+LSN+YA +GRW D ++VR M+DR VKK G+S + V VH F G
Sbjct: 456 LELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAG 515
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
+ HP+ ++I+ EEL +++ G+V +T +VL D+ E EK + HSEKLA+ +G++
Sbjct: 516 EESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLM 575
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIK 746
+ PA PIR+MKNLR+CEDCH+A +
Sbjct: 576 NTPAETPIRIMKNLRICEDCHSAFQ 600
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 49/284 (17%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N ++ Y G++ AR +F++MPQRD+V+WN+MI+ ++ A +LF MP+R+V
Sbjct: 167 NMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVR 226
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAA----------------- 194
SW +M++GY Q G A A +F +M E NE++ +LAA
Sbjct: 227 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 286
Query: 195 ------------------YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
YV+ G +EEAC +FE VVSW++++GG R +A
Sbjct: 287 NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEAL 346
Query: 237 WIFDRMPV----RDEVSWNTMITGYAQNNYLAEAQRLF-----EEAPVKDVFTWTAMVSG 287
+F M + V++ ++ + ++E +R F + + + + MV
Sbjct: 347 RLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDL 406
Query: 288 YVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMARE 330
+ G + EA MP K N V W A++ K ++MA E
Sbjct: 407 LSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEE 450
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 133/312 (42%), Gaps = 57/312 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ WN+ I ++ G + A +F+ MP R+ S+ +MI+GY+ G+ A +F +M
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252
Query: 120 Q---------------------------------------RDLVSWNVMISGYVRNKSLS 140
+ R++ N +I YV+ L
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
A +FE M +R VVSW+ M+ G A +G A+ A R+F M +E N +++ GLL A
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS 372
Query: 197 QNGRIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G I E F S ++ + ++ + L +A MP++ + V W
Sbjct: 373 HMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVW 432
Query: 251 NTMITG--YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++ +N +AE + L E P+ D + + + + Y + G+ ++ + M +
Sbjct: 433 GALLGACRVHKNVEMAEEAIKHLLELDPLNDGY-YVVLSNIYAEAGRWEDTARVRKFMKD 491
Query: 307 ---KNTVSWNAM 315
K T W+++
Sbjct: 492 RQVKKTPGWSSI 503
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 258/744 (34%), Positives = 382/744 (51%), Gaps = 99/744 (13%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----E 182
N ++S +VR +L A +F M +RDV SWN ++ GYA+ G D A ++ RML
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 183 KNEISWNGLL-----AAYVQNGRIEEACML---FESKANWEVVSWNSLMGGFVKQKRLGD 234
N ++ +L + + G+ A ++ FES +V N+L+ +VK + +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFES----DVDVGNALITMYVKCGDISN 251
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVS---- 286
A+ +FD+MP RD +SWN MI+GY +N E LF E + D+ T T + S
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 287 -----------GYVQN--------------------GKVDEARMIFDAMPEKNTVSWNAM 315
GYV G+++EA +F M K+ VSW AM
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 316 IAGYVQTKRMDMARELFEAMTCK------------------------------------- 338
IA V K A E ++ M +
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 339 --NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+V N++I Y++ + +A +F + + +SW ++I G + S ++L F +
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
MK + N SVLS CA + +L GK++H ++ G F+ NA+L MY +CG
Sbjct: 492 MKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGR 550
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
A + F KDV +WN ++ GYA+ G K A+ LF+ M + I PD+IT + +L A
Sbjct: 551 KVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCA 609
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS +G+V +G EYF M Y + PN KHY C+VD+LGRAG+LD+A + +++MP PDAA
Sbjct: 610 CSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAA 669
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
WGALL ACR++ EL E AA+ +FE + ++ G Y+LL NLYA G W VSKVR MR
Sbjct: 670 IWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMR 729
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
+RG+ G SW+E++ KVH F GD H + I L+ K+K++GF
Sbjct: 730 ERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTS 789
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
++ E + + HSE+ A+A+G+++ G PI V KNL +C CHN +K IS IV R I
Sbjct: 790 EI-ESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREI 848
Query: 757 ILRDNNRFHHFSGGSCSCGD--YW 778
+RD +HHF G CSCGD YW
Sbjct: 849 SVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 143/273 (52%), Gaps = 7/273 (2%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
+C V N +++ + + G + A +F +M + D SW ++ GYA++G +++L L+
Sbjct: 128 SCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYH 187
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M R N F SVL TCA ++ + GK++H +++ GFE+ VGNAL+ MY KCG
Sbjct: 188 RMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCG 247
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ A F+++ +D ISWN MI+GY +G G + L LF M+ + + PD ITM + S
Sbjct: 248 DISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVAS 307
Query: 516 ACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
AC G + Y + ++G + ++ + GRL+EA+ + M D
Sbjct: 308 ACELLDNERLGRGVHGYVVKSEFG--GDISMNNSLIQMYSSLGRLEEAETVFSRME-SKD 364
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+W A++ + + +L KA E ME E
Sbjct: 365 VVSWTAMIASLVSH---KLPFKAVETYKMMELE 394
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 183/451 (40%), Gaps = 94/451 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSY-------------------- 95
D+ WNV + + + GC D AL++++ M R + ++
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221
Query: 96 ---------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
NA+I+ Y+ G + AR +FD+MP+RD +SWN MISGY N
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGL 281
Query: 141 AARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKN---EISW-NGLL 192
LF MM + D+++ T+ S R + +++ +IS N L+
Sbjct: 282 EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLI 341
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEV 248
Y GR+EEA +F + +VVSW +++ V K A + M + DE+
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEI 401
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+ ++++ A +L RL E A V V +++ Y + VD A +F +
Sbjct: 402 TLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI 461
Query: 305 PEKNTVSWNAMIAGYVQTKR----MDMARELFEAM------------TCKNVASW----- 343
KN VSW ++I G R + R++ E+M C + +
Sbjct: 462 SGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKE 521
Query: 344 -----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
N ++ Y + G A N F+ + D +W ++ GYAQ G
Sbjct: 522 IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKK-DVTAWNILLTGYAQQGQ 580
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
++ ++ LF +M + F S+L C+
Sbjct: 581 AKLAVELFDKMLELEIHPDEITFISLLCACS 611
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/774 (32%), Positives = 396/774 (51%), Gaps = 96/774 (12%)
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR------DLVSWNVMISG 132
++L + S+P S + + G + G R V + +R DL NV+++
Sbjct: 46 TSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNM 105
Query: 133 YVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISW 188
Y + L++AR LF+ MP+R++VS+ T++ +AQ G +AA +F R+ E N+
Sbjct: 106 YGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVL 165
Query: 189 NGLLAAYVQ------NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+L + G + N V S L+ + + DA+ +F+ +
Sbjct: 166 TTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGS--GLIDAYSLCSLVSDAEHVFNGI 223
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWT---------------- 282
+D V W M++ Y++N+ A R+F + V + F T
Sbjct: 224 VRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGK 283
Query: 283 -------------------AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
A++ Y + G + +AR+ F+ +P + + + MI+ Y Q+
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 343
Query: 324 RMDMARELFEAM-----------------TCKNVASW----------------------N 344
+ + A ELF + C N+ N
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
++ YA+ ++ + +F + + +SW I+ G++QSG E++L +F EM+
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+ ++SVL CA+ AS+ Q+H + K F +GN+L+ Y KCG + +A F
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+ ++++D+ISWN +I+GYA HG DAL LF+ M ++ +DIT V +LS CS TGLV
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G F SM D+G+ P+ +HYTC+V LLGRAGRL++A + ++P P A W ALL +
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
C ++ L +AE I E+EP++ YVLLSN+YAA+G V+ +R MR+ GV+KV
Sbjct: 644 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 703
Query: 645 GYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
G SW+E++ ++H FSVG HP+ I A LE L K ++G++ +VLHDV +E+K
Sbjct: 704 GLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKT 763
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
ML HSE+LA+AYG++ P G PIR++KNLR C DCH A ISKIV R II+
Sbjct: 764 RMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 125/587 (21%), Positives = 226/587 (38%), Gaps = 131/587 (22%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF- 115
G D+ NV + + + G SA +F+ MP R+ VS+ ++ + G + A +F
Sbjct: 92 GRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFR 151
Query: 116 ---------DQMPQRDLV------------------SWNV-----------MISGYVRNK 137
+Q ++ +W + +I Y
Sbjct: 152 RLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCS 211
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA 193
+S A ++F + ++D V W M+S Y++N + A R+F +M + N + +L
Sbjct: 212 LVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLK 271
Query: 194 AY-----VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
A V G+ C + ++ + E +L+ + K + DA+ F+ +P D +
Sbjct: 272 AAVCLPSVVLGKGIHGCAI-KTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVI 330
Query: 249 SWNTMITGYAQNNYLAEAQRLF----------------------------------EEAP 274
+ MI+ YAQ+N +A LF
Sbjct: 331 LLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHA 390
Query: 275 VK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+K D+F A++ Y + +D + IF ++ + N VSWN ++ G+ Q+ + A
Sbjct: 391 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450
Query: 330 ELFEAM-----------------TCKNVASW----------------------NTMITGY 350
+F M C + AS N++I Y
Sbjct: 451 SVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTY 510
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
A+ G I A +F + + D ISW AII+GYA G + D+L LF M + N F
Sbjct: 511 AKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFV 570
Query: 411 SVLSTCANLASLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVD 469
++LS C++ + G L + + G + ++ + + G + +A +I
Sbjct: 571 ALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPS 630
Query: 470 -KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ W +++ H AL F + K + I+P D T +LS
Sbjct: 631 APSAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLS 675
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 258/744 (34%), Positives = 382/744 (51%), Gaps = 99/744 (13%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----E 182
N ++S +VR +L A +F M +RDV SWN ++ GYA+ G D A ++ RML
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 183 KNEISWNGLL-----AAYVQNGRIEEACML---FESKANWEVVSWNSLMGGFVKQKRLGD 234
N ++ +L + + G+ A ++ FES +V N+L+ +VK + +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFES----DVDVGNALITMYVKCGDISN 251
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVS---- 286
A+ +FD+MP RD +SWN MI+GY +N E LF E + D+ T T + S
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 287 -----------GYVQN--------------------GKVDEARMIFDAMPEKNTVSWNAM 315
GYV G+++EA +F M K+ VSW AM
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 316 IAGYVQTKRMDMARELFEAMTCK------------------------------------- 338
IA V K A E ++ M +
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 339 --NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
+V N++I Y++ + +A +F + + +SW ++I G + S ++L F +
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
MK + N SVLS CA + +L GK++H ++ G F+ NA+L MY +CG
Sbjct: 492 MKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGR 550
Query: 457 VEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSA 516
A + F KDV +WN ++ GYA+ G K A+ LF+ M + I PD+IT + +L A
Sbjct: 551 KVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCA 609
Query: 517 CSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
CS +G+V +G EYF M Y + PN KHY C+VD+LGRAG+LD+A + +++MP PDAA
Sbjct: 610 CSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAA 669
Query: 577 TWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
WGALL ACR++ EL E AA+ +FE + ++ G Y+LL NLYA G W VSKVR MR
Sbjct: 670 IWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMR 729
Query: 637 DRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLH 696
+RG+ G SW+E++ KVH F GD H + I L+ K+K++GF
Sbjct: 730 ERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTS 789
Query: 697 DVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLI 756
++ E + + HSE+ A+A+G+++ G PI V KNL +C CHN +K IS IV R I
Sbjct: 790 EI-ESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREI 848
Query: 757 ILRDNNRFHHFSGGSCSCGD--YW 778
+RD +HHF G CSCGD YW
Sbjct: 849 SVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 143/273 (52%), Gaps = 7/273 (2%)
Query: 336 TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFI 395
+C V N +++ + + G + A +F +M + D SW ++ GYA++G +++L L+
Sbjct: 128 SCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYH 187
Query: 396 EMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCG 455
M R N F SVL TCA ++ + GK++H +++ GFE+ VGNAL+ MY KCG
Sbjct: 188 RMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCG 247
Query: 456 SVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ A F+++ +D ISWN MI+GY +G G + L LF M+ + + PD ITM + S
Sbjct: 248 DISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVAS 307
Query: 516 ACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
AC G + Y + ++G + ++ + GRL+EA+ + M D
Sbjct: 308 ACELLDNERLGRGVHGYVVKSEFG--GDISMNNSLIQMYSSLGRLEEAETVFSRME-SKD 364
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEMEPE 607
+W A++ + + +L KA E ME E
Sbjct: 365 VVSWTAMIASLVSH---KLPFKAVETYKMMELE 394
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 183/451 (40%), Gaps = 94/451 (20%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSY-------------------- 95
D+ WNV + + + GC D AL++++ M R + ++
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221
Query: 96 ---------------NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLS 140
NA+I+ Y+ G + AR +FD+MP+RD +SWN MISGY N
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGL 281
Query: 141 AARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKN---EISW-NGLL 192
LF MM + D+++ T+ S R + +++ +IS N L+
Sbjct: 282 EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLI 341
Query: 193 AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEV 248
Y GR+EEA +F + +VVSW +++ V K A + M + DE+
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEI 401
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
+ ++++ A +L RL E A V V +++ Y + VD A +F +
Sbjct: 402 TLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI 461
Query: 305 PEKNTVSWNAMIAGYVQTKR----MDMARELFEAM------------TCKNVASW----- 343
KN VSW ++I G R + R++ E+M C + +
Sbjct: 462 SGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKE 521
Query: 344 -----------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
N ++ Y + G A N F+ + D +W ++ GYAQ G
Sbjct: 522 IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKK-DVTAWNILLTGYAQQGQ 580
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
++ ++ LF +M + F S+L C+
Sbjct: 581 AKLAVELFDKMLELEIHPDEITFISLLCACS 611
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/653 (35%), Positives = 360/653 (55%), Gaps = 39/653 (5%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLA 193
++ A ++F + K + ++N M+ G A D A +F +M EK ++ +++ +L
Sbjct: 70 TIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVL- 128
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
+AC ++ E V L GF +E NT+
Sbjct: 129 ---------KACSRMKALREGEQVHALILKSGFKS-----------------NEFVENTL 162
Query: 254 ITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA----RMIFDAMPEKNT 309
I YA + A+ +F+ P + + W +M+SGY +NG DE R I + E +
Sbjct: 163 IQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDD 222
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITG----YAQSGEITHARNLFDR 365
V+ +++ + +++ + E + K + NT+ T YA+ G++ AR LFD
Sbjct: 223 VTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDE 282
Query: 366 MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELG 425
M + D ++W+A+I+GYAQ+ +++L LF EM++ N SVL +CA L + E G
Sbjct: 283 MDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETG 342
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
K +H + K + +G L+ Y KCG ++ + F+E+ K+V +W +I G A +
Sbjct: 343 KWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANN 402
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G GK AL F SM +KP+D+T +G+LSACSH LV++G F SM RD+ + P +H
Sbjct: 403 GEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEH 462
Query: 546 YTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
Y CMVD+LGRAG L+EA + NMPF P+A W LL +CR + E+AEK+ E I +E
Sbjct: 463 YGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLE 522
Query: 606 PENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLH 665
P ++G Y+LLSN YA GR D +VR ++++ +KK+ G S +E+ VH F D H
Sbjct: 523 PAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEH 582
Query: 666 PEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPA 725
I+ L+++ ++K+ G+V +T + EE KE + +HSEKLA+AYG++
Sbjct: 583 KHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSP 642
Query: 726 GRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IR+ KNLR+C DCHNA K IS++ R+II+RD NRFHHF G CSC DYW
Sbjct: 643 RTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 201/451 (44%), Gaps = 60/451 (13%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM----PQRDLVSWNVMISGY 133
D AL +FN + + S +YN MI G D A +F +M Q D +++ ++
Sbjct: 72 DYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKAC 131
Query: 134 VRNKSLSAARNLFEMMPKRDVVS----WNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
R K+L + ++ K S NT++ YA G AR +FD M E++ ++WN
Sbjct: 132 SRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWN 191
Query: 190 GLLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLM--GGFVKQKRLGD--AKWIFDR 241
+L+ Y +NG +E LF E + ++ V+ S++ G + +G+ ++I +
Sbjct: 192 SMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSK 251
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
R+ ++I YA+ + A++LF+E +DV W+AM+SGY Q + EA +F
Sbjct: 252 GLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLF 311
Query: 302 DAMPEKN---------TVSWNAMIAG----------YVQTKRMDMARELFEAMTCKNVAS 342
M + N +V ++ + G Y++ K+M + V
Sbjct: 312 HEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT-----------VTL 360
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
+I YA+ G I + +F M + +W A+I G A +G + +L F M
Sbjct: 361 GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV 420
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA-------GCFVGNALLVMYCKCG 455
+ N F VLS C++ ++ G+ L + + F+ GC V + + G
Sbjct: 421 KPNDVTFIGVLSACSHACLVDQGRHLFNSM-RRDFDIEPRIEHYGCMVD-----ILGRAG 474
Query: 456 SVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+EEAY + + + + W T++A H
Sbjct: 475 FLEEAYQFIDNMPFPPNAVVWRTLLASCRAH 505
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 154/370 (41%), Gaps = 82/370 (22%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR--- 121
N I + G A HVF+ MP RS V++N+M+SGY NG D ++F ++ +
Sbjct: 160 NTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIE 219
Query: 122 ----------------------DLVSWNVMISGYVRNKSLS--------------AARNL 145
+L+ ++ G RN +L+ AR L
Sbjct: 220 FDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKL 279
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F+ M KRDVV+W+ M+SGYAQ A +F M + NE++ +L + G
Sbjct: 280 FDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG-- 337
Query: 202 EEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT-MITGYAQN 260
+E W ++K+K++ + V+ T +I YA+
Sbjct: 338 -----------AYETGKWVHF---YIKKKKM------------KLTVTLGTQLIDFYAKC 371
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMI 316
Y+ + +F+E K+VFTWTA++ G NG+ A F +M E N V++ ++
Sbjct: 372 GYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVL 431
Query: 317 AGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHD 370
+ +D R LF +M + + M+ ++G + A D MP +
Sbjct: 432 SACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPN 491
Query: 371 CISWAAIIAG 380
+ W ++A
Sbjct: 492 AVVWRTLLAS 501
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
RR++ ++I Y GQ+D AR++FD+M +RD+V+W+ MISGY + A NLF
Sbjct: 254 RRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHE 313
Query: 149 MPKRDV----VSWNTMLSGYAQNGYADAAR----RIFDRMLEKNEISWNGLLAAYVQNGR 200
M K +V V+ ++L A G + + I + ++ L+ Y + G
Sbjct: 314 MQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGY 373
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD----EVSWNTMITG 256
I+ + +F+ + V +W +L+ G A F M D +V++ +++
Sbjct: 374 IDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433
Query: 257 YAQNNYLAEAQRLFEEAPVKD------VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNT 309
+ + + + LF +D + + MV + G ++EA D MP N
Sbjct: 434 CSHACLVDQGRHLFNSMR-RDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNA 492
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMT 336
V W ++A K ++MA + E +T
Sbjct: 493 VVWRTLLASCRAHKNIEMAEKSLEHIT 519
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/573 (37%), Positives = 335/573 (58%), Gaps = 13/573 (2%)
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEA 273
++++L+ V + + K +F+ M D N ++ + + + +A++LF+E
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179
Query: 274 PVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMAR 329
P KDV +W MV G V G EA +F M + + ++ MI + + +
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGK 239
Query: 330 ELFEAMTCKNVASWN----TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ + V + +I Y++ G I A +FD+MP+ + W +IIA YA G
Sbjct: 240 QIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 299
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
YSE++L L+ EM+ G ++ + V+ CA LASLE KQ H LV+ GF
Sbjct: 300 YSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANT 359
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ Y K G +E+A H F + K+VISWN +IAGY HG G++A+ +FE M G+ P
Sbjct: 360 ALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTP 419
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+T + +LSACS++GL ++G E FYSM RD+ V P + HY CM++LLGR LDEA L
Sbjct: 420 THVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYAL 479
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
++ PF+P A W ALL ACR++ EL + AAE ++ MEPE Y++L NLY +SG+
Sbjct: 480 IRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKL 539
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
+ + + ++ +G++ + SW+EV+ + + F GD H + IY ++ L ++ +
Sbjct: 540 KEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKH 599
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+ + +L DV EEE + +L+YHSEKLA+A+G+++ P P+++ + RVC DCH+AI
Sbjct: 600 GYAEENETLLPDVDEEE-QRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAI 658
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K I+ + GR I++RD +RFHHF GSCSCGDYW
Sbjct: 659 KLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 154/358 (43%), Gaps = 80/358 (22%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSWNVMISGYVRNKSLSAARNLFEMM 149
+Y+A++S + + ++VF+ M + DL N ++ +V+ + AR LF+ M
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179
Query: 150 PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA---------AYVQNGR 200
P++DV SW TM+ G G A R+F M ++ + A VQ G+
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGK 239
Query: 201 IEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+C L + VS +L+ + K + DA +FD+MP + V WN++I YA +
Sbjct: 240 QIHSCALKRGVGDDHFVSC-ALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 298
Query: 261 NYLAEAQRLFEE----------------------------------APVK-----DVFTW 281
Y EA L+ E A V+ D+
Sbjct: 299 GYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVAN 358
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVA 341
TA+V Y + G++++AR +F+ M KN +SWNA+IAGY + A E+FE M + V
Sbjct: 359 TALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVT 418
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
P H +++ A+++ + SG S+ +F MKR
Sbjct: 419 -------------------------PTH--VTFLAVLSACSYSGLSQRGWEIFYSMKR 449
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 7/218 (3%)
Query: 389 DSLRLF--IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+++ LF +E++ G + S + +++S C L S+ K++ ++ GFE +V N
Sbjct: 99 EAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNR 158
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+L M+ KCG + +A F+E+ +KDV SW TM+ G G +A LF M
Sbjct: 159 VLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGR 218
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
T ++ A + GLV+ G + +S GV + ++D+ + G +++A +
Sbjct: 219 SRTFATMIRASAGLGLVQVGKQ-IHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVF 277
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
MP E W +++ + L+G +E+A + FEM
Sbjct: 278 DQMP-EKTTVGWNSIIASYALHG---YSEEALSLYFEM 311
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 188/463 (40%), Gaps = 73/463 (15%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N + H++ G A +F+ MP + S+ M+ G + G A ++F M
Sbjct: 152 DLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMW 211
Query: 120 QR---------------------------------------DLVSWNVMISGYVRNKSLS 140
+ D +I Y + S+
Sbjct: 212 KEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIE 271
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLA------- 193
A +F+ MP++ V WN++++ YA +GY++ A ++ M + + ++
Sbjct: 272 DAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICA 331
Query: 194 --AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
A +++ + A ++ A ++V+ +L+ + K R+ DA+ +F+RM ++ +SWN
Sbjct: 332 RLASLEHAKQAHAALVRHGFAT-DIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWN 390
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+I GY + EA +FE+ + V T+ A++S +G IF +M
Sbjct: 391 ALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRD 450
Query: 308 NTVS-----WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-WNTMITGY-----AQSGEI 356
+ V + MI + +D A L K A+ W ++T + G++
Sbjct: 451 HKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKL 510
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
A L+ P+ C ++ ++ Y SG +++ + +K+ G R+ P S +
Sbjct: 511 A-AEKLYGMEPEKLC-NYIVLLNLYNSSGKLKEAAGILQTLKKKGLRM--LPACSWVEVK 566
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
+ G + H Q ++ + + L+V CK G EE
Sbjct: 567 KQPYAFLCGDKSHSQTKEIYQKV-----DNLMVEICKHGYAEE 604
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/643 (36%), Positives = 363/643 (56%), Gaps = 52/643 (8%)
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
EIS + L+ A ++ G I+ A +F+ + +V+WNSL+ +K +R +A ++ M
Sbjct: 99 EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMIT 158
Query: 245 R----DEVSWNTMITGYAQNNYLAEAQR-----LFEEAPVKDVFTWTAMVSGYVQNGKVD 295
DE + +++ ++ + EAQR + V +VF +A+V YV+ GK
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 296 EARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM-----------------TCK 338
EA+++ D + EK+ V A+I GY Q A + F++M +C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 339 NV----------------------ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAA 376
N+ AS +++T Y + + + +F + + +SW +
Sbjct: 279 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338
Query: 377 IIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
+I+G Q+G E +L F +M R + N +S L C+NLA E G+Q+HG + K G
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFE 496
F+ + G+ L+ +Y KCG + A F+ + + DVIS NTMI YA++GFG++AL LFE
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 497 SMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRA 556
M +G++P+D+T++ +L AC+++ LVE+G E F S +D ++ N HY CMVDLLGRA
Sbjct: 459 RMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTND-HYACMVDLLGRA 517
Query: 557 GRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLS 616
GRL+EA+ L + PD W LL AC+++ K E+AE+ I E+EP + G +L+S
Sbjct: 518 GRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMS 576
Query: 617 NLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL-HPEKDRIYAYL 675
NLYA++G+W V +++ KM+D +KK SW+E+ + HTF GD HP ++I L
Sbjct: 577 NLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENL 636
Query: 676 EELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNL 735
EEL K K G+V V D+ E KE L HSEKLA+A+ + G IR++KNL
Sbjct: 637 EELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNL 695
Query: 736 RVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
RVC DCH+ IK +S+++ R II RD+ RFHHF GSCSCGDYW
Sbjct: 696 RVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 194/451 (43%), Gaps = 56/451 (12%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP 150
+ +S + ++ L G +D ARQVFD M +R +V+WN +I+ ++++ A ++ +M
Sbjct: 98 AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMI 157
Query: 151 KRDVVSWNTMLSG----------------------------------------YAQNGYA 170
+V+ LS Y + G
Sbjct: 158 TNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKT 217
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES----KANWEVVSWNSLMGGF 226
A+ + DR+ EK+ + L+ Y Q G EA F+S K ++ S++
Sbjct: 218 REAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISC 277
Query: 227 VKQKRLGDAKWIFDRMPVRD----EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
K +G+ K I M S +++T Y + + + ++ R+F+ + +WT
Sbjct: 278 GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWT 337
Query: 283 AMVSGYVQNGKVDEARMIFDAM----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC- 337
+++SG VQNG+ + A + F M + N+ + ++ + G + R++ +T
Sbjct: 338 SLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY 397
Query: 338 ---KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF 394
++ + + +I Y + G AR +FD + + D IS +I YAQ+G+ ++L LF
Sbjct: 398 GFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLF 457
Query: 395 IEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M G + N SVL C N +E G +L K ++ + +
Sbjct: 458 ERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRA 517
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
G +EEA E+++ D++ W T+++ H
Sbjct: 518 GRLEEAEMLTTEVINPDLVLWRTLLSACKVH 548
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 52/277 (18%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+T ++R D +L VF + + VS+ ++ISG + NG+ + A F +M RD + N
Sbjct: 309 LTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM-MRDSIKPN 367
Query: 128 --------------------------VMISGYVRNKSLSA--------------ARNLFE 147
V G+ R+K + AR +F+
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD 427
Query: 148 MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEE 203
+ + DV+S NTM+ YAQNG+ A +F+RM L+ N+++ +L A + +EE
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEE 487
Query: 204 ACMLFESKANWEVVSWNSLMGGFV----KQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
C LF+S +++ N V + RL +A+ + + D V W T+++
Sbjct: 488 GCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKV 547
Query: 260 NNYLAEAQRLFE---EAPVKDVFTWTAMVSGYVQNGK 293
+ + A+R+ E D T M + Y GK
Sbjct: 548 HRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGK 584
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 267/847 (31%), Positives = 409/847 (48%), Gaps = 117/847 (13%)
Query: 34 PYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV 93
P S+ R LN ++ QWN ++ ++RN D A+H F + +
Sbjct: 159 PLESRLVFDRLLNK------------NLFQWNALVSGYVRNELYDEAIHTFLELISVTEF 206
Query: 94 SY----------------------------------------NAMISGYLLNGQLDPARQ 113
NAMI+ Y G LD A +
Sbjct: 207 QPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVE 266
Query: 114 VFDQMPQRDLVSWNVMISGYVRN----KSLSAARNLFE----MMPKRDVVSWNTMLSGYA 165
+FD+MP+++L+SWN +I G+ N ++ A R+L E ++P DV + T+L +
Sbjct: 267 LFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIP--DVATMVTLLPVCS 324
Query: 166 QNGYADAARRIFDRMLEKNEIS----WNGLLAAYVQNGRIEEACMLFESKANWEVVSWNS 221
G D I ++ + N L+ Y + G + EA +LF N VVSWNS
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384
Query: 222 LMG-----GFVKQK-RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
++G GFV + L W+ + + +EV+ ++ + + L + R +
Sbjct: 385 MIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELL-SLRALHGYSL 443
Query: 276 KDVFTW-----TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ----TKRMD 326
+ F + A ++ Y + G + A +F M K+ SWNA+I G+ Q K +D
Sbjct: 444 RHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALD 503
Query: 327 MAREL------------------------------FEAMTCKNVASWN-----TMITGYA 351
E+ +N N ++++ Y
Sbjct: 504 FYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYF 563
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ + R F+RM + + W A+++GY+Q+ ++L LF +M G + S
Sbjct: 564 HCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIAS 623
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+L C+ L++L LGK++H +K FV +L+ MY K G + + F + K+
Sbjct: 624 ILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKE 683
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
V SWN MI G+ HG G A+ LFE MK +PD T +G+L AC H GLV +G Y
Sbjct: 684 VASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLA 743
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
M Y + P +HY C++D+LGRAGRL+EA N + MP EPDA W +LL + Y
Sbjct: 744 QMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDL 803
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
E+ EK AE + +E A Y+LLSNLYA +G+W V VR KM+D ++K G SW+E+
Sbjct: 804 EMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIEL 863
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
+ KV++F G+ +P D I LE ++ + G+ VLH++ E EK +L+ HS
Sbjct: 864 RGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHS 923
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
EK+A+ +G L+ G +R+ KNLR+C DCHNA K+ISK R I++RDN RFHHF G
Sbjct: 924 EKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGI 983
Query: 772 CSCGDYW 778
CSCGDYW
Sbjct: 984 CSCGDYW 990
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 150/644 (23%), Positives = 261/644 (40%), Gaps = 134/644 (20%)
Query: 104 LNGQLDPARQVFDQMPQRDLV----SWNVMISGYVRNKSLSAARNLFEMMP-----KRDV 154
LNG LD ++ + DL + +++ + K++ R L EM+ D
Sbjct: 84 LNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDF 143
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANW 214
V +++ Y+ GY +R +FDR+L KN LF+
Sbjct: 144 VLNTRLITMYSICGYPLESRLVFDRLLNKN----------------------LFQ----- 176
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-----RDEVSWNTMITGYAQNNYLAEAQRL 269
WN+L+ G+V+ + +A F + D ++ +I + + +
Sbjct: 177 ----WNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 270 FEEAP----VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT--- 322
A + D+F AM++ Y + G +DEA +FD MPE+N +SWN++I G+ +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 323 -KRMDMARELFEA-----------MTCKNVAS--------------------------WN 344
+ R L E+ +T V S N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-- 402
+I Y++ G ++ A LF ++ +SW ++I Y++ G+ ++ L +M E
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+N ++L C + L + LHG ++ F+ + NA + Y KCGS+ A H
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEH 472
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F + K V SWN +I G+A++G AL + M +GI PDD ++V +L AC GL
Sbjct: 473 VFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGL 532
Query: 523 VEKGTE-----------------------YFYSMNRDYGVI-------PNSKHYTCMVDL 552
++ G E YF+ YG NS + M+
Sbjct: 533 LQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSG 592
Query: 553 LGRAGRLDEAQNLMKNM---PFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP--- 606
+ +EA +L + M EPD ++LGAC L ++ F ++
Sbjct: 593 YSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVH--CFALKNSLM 650
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKK----VTGY 646
E+ + L ++YA SG G ++ ++ + V +TG+
Sbjct: 651 EDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGF 694
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,549,446,247
Number of Sequences: 23463169
Number of extensions: 523107780
Number of successful extensions: 1532431
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8547
Number of HSP's successfully gapped in prelim test: 3896
Number of HSP's that attempted gapping in prelim test: 1188559
Number of HSP's gapped (non-prelim): 84138
length of query: 778
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 627
effective length of database: 8,816,256,848
effective search space: 5527793043696
effective search space used: 5527793043696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)