BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004024
(778 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 1127 bits (2915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/774 (67%), Positives = 645/774 (83%), Gaps = 5/774 (0%)
Query: 6 RLRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPK-PAGDWDIRQW 64
R +QLH + L+ + N AN + S K + KS+ KP GD DI++W
Sbjct: 12 RAQQLHYTS-LNGLKRRCNNAHGAAN---FHSLKRATQTQIQKSQTKPLLKCGDSDIKEW 67
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
NVAI+++MR G C+ AL VF MPR SSVSYN MISGYL NG+ + AR++FD+MP+RDLV
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
SWNVMI GYVRN++L AR LFE+MP+RDV SWNTMLSGYAQNG D AR +FDRM EKN
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN 187
Query: 185 EISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV 244
++SWN LL+AYVQN ++EEACMLF+S+ NW +VSWN L+GGFVK+K++ +A+ FD M V
Sbjct: 188 DVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV 247
Query: 245 RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
RD VSWNT+ITGYAQ+ + EA++LF+E+PV+DVFTWTAMVSGY+QN V+EAR +FD M
Sbjct: 248 RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 305 PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFD 364
PE+N VSWNAM+AGYVQ +RM+MA+ELF+ M C+NV++WNTMITGYAQ G+I+ A+NLFD
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+MP+ D +SWAA+IAGY+QSG+S ++LRLF++M+R G RLNRS F+S LSTCA++ +LEL
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
GKQLHG+LVK G+E GCFVGNALL+MYCKCGS+EEA F+E+ KD++SWNTMIAGY+R
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HGFG+ AL FESMK G+KPDD TMV +LSACSHTGLV+KG +YFY+M +DYGV+PNS+
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 547
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CMVDLLGRAG L++A NLMKNMPFEPDAA WG LLGA R++G TELAE AA+ IF M
Sbjct: 548 HYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
EPEN+GMYVLLSNLYA+SGRWGDV K+R++MRD+GVKKV GYSW+E+QNK HTFSVGD
Sbjct: 608 EPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEF 667
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIP 724
HPEKD I+A+LEEL+ ++K+ G+V T +VLHDV EEEKE M+RYHSE+LAVAYGI+ +
Sbjct: 668 HPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVS 727
Query: 725 AGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+GRPIRV+KNLRVCEDCHNAIK++++I GRLIILRDNNRFHHF GSCSCGDYW
Sbjct: 728 SGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/675 (46%), Positives = 446/675 (66%), Gaps = 2/675 (0%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G++ AR++FD + + SWN M++GY N AR LF+ MP R+++SWN ++SGY
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+NG D AR++FD M E+N +SW L+ YV NG+++ A LF VSW ++ G
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIG 150
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
F++ R+ DA +++ +P +D ++ +MI G + + EA+ +F+E + V TWT MV
Sbjct: 151 FLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+GY QN +VD+AR IFD MPEK VSW +M+ GYVQ R++ A ELFE M K V + N
Sbjct: 211 TGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNA 270
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MI+G Q GEI AR +FD M + + SW +I + ++G+ ++L LFI M++ G R
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
S+LS CA+LASL GKQ+H QLV+ F+ +V + L+ MY KCG + ++ F+
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVE 524
KD+I WN++I+GYA HG G++AL +F M G KP+++T V LSACS+ G+VE
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + + SM +GV P + HY CMVD+LGRAGR +EA ++ +M EPDAA WG+LLGA
Sbjct: 451 EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVT 644
CR + + ++AE A+ + E+EPEN+G Y+LLSN+YA+ GRW DV+++R M+ R V+K
Sbjct: 511 CRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSP 570
Query: 645 GYSWLEVQNKVHTFSVGD-TLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEK 703
G SW EV+NKVH F+ G HPE++ I L+EL+ L++ G+ LHDV EEEK
Sbjct: 571 GCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEK 630
Query: 704 EHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNR 763
+ L+YHSE+LAVAY +L + G PIRVMKNLRVC DCH AIK ISK+ R IILRD NR
Sbjct: 631 VNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANR 690
Query: 764 FHHFSGGSCSCGDYW 778
FHHF G CSC DYW
Sbjct: 691 FHHFRNGECSCKDYW 705
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 268/525 (51%), Gaps = 49/525 (9%)
Query: 30 ANTNPYPSKKTLKRHLNS-----KSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF 84
+ T P P+ HL+ ++R I WN + + N A +F
Sbjct: 12 STTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF 71
Query: 85 NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARN 144
+ MP R+ +S+N ++SGY+ NG++D AR+VFD MP+R++VSW ++ GYV N + A +
Sbjct: 72 DEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAES 131
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
LF MP+++ VSW ML G+ Q+G D A ++++ + +K+ I+ ++ + GR++EA
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+F+ + V++W +++ G+ + R+ DA+ IFD MP + EVSW +M+ GY QN +
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIE 251
Query: 265 EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR 324
+A+ LFE PVK V AM+SG Q G++ +AR +FD+M E+N SW +I + +
Sbjct: 252 DAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 325 MDMARELFEAM-----------------TCKNVASW----------------------NT 345
A +LF M C ++AS +
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RL 404
++T Y + GE+ ++ +FDR P D I W +II+GYA G E++L++F EM G +
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKV-GFEAGCFVGNALLVMYCKCGSVEEAYHA 463
N F + LS C+ +E G +++ + V G + ++ M + G EA
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM 491
Query: 464 FEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ + V+ D W +++ H + + F + K + I+P++
Sbjct: 492 IDSMTVEPDAAVWGSLLGACRTH--SQLDVAEFCAKKLIEIEPEN 534
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/674 (45%), Positives = 433/674 (64%), Gaps = 1/674 (0%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYA 165
G+++ AR+ FD + + + SWN ++SGY N AR LF+ M +R+VVSWN ++SGY
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+N AR +F+ M E+N +SW ++ Y+Q G + EA LF VSW + GG
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGG 150
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMV 285
+ R+ A+ ++D MPV+D V+ MI G + + EA+ +F+E ++V TWT M+
Sbjct: 151 LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMI 210
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNT 345
+GY QN +VD AR +F+ MPEK VSW +M+ GY + R++ A E FE M K V + N
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA 270
Query: 346 MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
MI G+ + GEI+ AR +FD M D +W +I Y + G+ ++L LF +M++ G R +
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 406 RSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
S+LS CA LASL+ G+Q+H LV+ F+ +V + L+ MY KCG + +A F+
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
KD+I WN++I+GYA HG G++AL +F M + G P+ +T++ IL+ACS+ G +E+
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G E F SM + V P +HY+C VD+LGRAG++D+A L+++M +PDA WGALLGAC
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC 510
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
+ + + +LAE AA+ +FE EP+NAG YVLLS++ A+ +WGDV+ VR MR V K G
Sbjct: 511 KTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPG 570
Query: 646 YSWLEVQNKVHTFSVGDTL-HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKE 704
SW+EV KVH F+ G HPE+ I LE+ + L++ G+ VLHDV EEEK
Sbjct: 571 CSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKV 630
Query: 705 HMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRF 764
L HSE+LAVAYG+L +P G PIRVMKNLRVC DCH AIK ISK+ R IILRD NRF
Sbjct: 631 DSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRF 690
Query: 765 HHFSGGSCSCGDYW 778
HHF+ G CSC DYW
Sbjct: 691 HHFNNGECSCRDYW 704
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 195/371 (52%), Gaps = 14/371 (3%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
+K + ++RN + + ++ W + +M+ G A +F MP R+ VS+ M
Sbjct: 90 IKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFG 149
Query: 101 GYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTM 160
G + +G++D AR+++D MP +D+V+ MI G R + AR +F+ M +R+VV+W TM
Sbjct: 150 GLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209
Query: 161 LSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWN 220
++GY QN D AR++F+ M EK E+SW +L Y +GRIE+A FE V++ N
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF- 279
+++ GF + + A+ +FD M RD +W MI Y + + EA LF + + V
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 280 TWTAMVS--------GYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
++ +++S +Q G+ A ++ + V+ + ++ YV+ + A+ +
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVA-SVLMTMYVKCGELVKAKLV 388
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYS 387
F+ + K++ WN++I+GYA G A +F MP ++ AI+ + +G
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 388 EDSLRLFIEMK 398
E+ L +F M+
Sbjct: 449 EEGLEIFESME 459
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 559 bits (1440), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/818 (36%), Positives = 451/818 (55%), Gaps = 106/818 (12%)
Query: 52 KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA 111
+P PA D R+ + I ++ G F++ RS N ++ L GQ+ A
Sbjct: 23 QPSPATFLDTRRVDARI---IKTG--------FDTDTCRS----NFIVEDLLRRGQVSAA 67
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
R+V+D+MP ++ VS N MISG+V+ +S+AR+LF+ MP R VV+W ++ YA+N + D
Sbjct: 68 RKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFD 127
Query: 172 AARRIFDRMLEK------NEISWNGLLA----AYVQN--GRIEEACMLFESKANWEVVSW 219
A ++F +M + +++ LL A QN G++ + N +
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS 187
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPV 275
N L+ + + +RL A +F+ +P +D V++NT+ITGY ++ E+ LF +
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 276 KDVFTWTAMVSG-----------------------------------YVQNGKVDEARMI 300
FT++ ++ Y ++ +V E RM+
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 301 FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC-----------------KNVASW 343
FD MPE + VS+N +I+ Y Q + + + F M C N++S
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 344 ----------------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
N+++ YA+ A +F +PQ +SW A+I+GY
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
Q G L+LF +M+ R ++S F +VL A+ ASL LGKQLH +++ G
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENV 487
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTV 501
F G+ L+ MY KCGS+++A FEE+ D++ +SWN +I+ +A +G G+ A+ F M
Sbjct: 488 FSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIES 547
Query: 502 GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDE 561
G++PD ++++G+L+ACSH G VE+GTEYF +M+ YG+ P KHY CM+DLLGR GR E
Sbjct: 548 GLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 562 AQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP-ENAGMYVLLSNLYA 620
A+ LM MPFEPD W ++L ACR++ LAE+AAE +F ME +A YV +SN+YA
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYA 667
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
A+G W V V+ MR+RG+KKV YSW+EV +K+H FS D HP D I + EL
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
+++++G+ T V+ DV E+ K L+YHSE+LAVA+ ++S P G PI VMKNLR C D
Sbjct: 728 EIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRD 787
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH AIK ISKIV R I +RD +RFHHFS G CSCGDYW
Sbjct: 788 CHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 542 bits (1396), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/592 (45%), Positives = 381/592 (64%), Gaps = 2/592 (0%)
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMPVRDE 247
N ++A V++G I+ A +F ++WNSL+ G K R+ +A +FD +P D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
S+N M++ Y +N +AQ F+ P KD +W M++GY + G++++AR +F +M EK
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
N VSWNAMI+GY++ ++ A F+ + V +W MITGY ++ ++ A +F M
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 368 -QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGK 426
+ ++W A+I+GY ++ ED L+LF M G R N S +S L C+ L++L+LG+
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q+H + K +L+ MYCKCG + +A+ FE + KDV++WN MI+GYA+HG
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 487 FGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
AL LF M I+PD IT V +L AC+H GLV G YF SM RDY V P HY
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
TCMVDLLGRAG+L+EA L+++MPF P AA +G LLGACR++ ELAE AAE + ++
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+NA YV L+N+YA+ RW DV++VR +M++ V KV GYSW+E++NKVH F D +HP
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHP 544
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
E D I+ L+ELE K+K G+ + LH+V EE+KE +L +HSEKLAVA+G + +P G
Sbjct: 545 ELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQG 604
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
I+V KNLR+C DCH AIK IS+I R II+RD RFHHF GSCSCGDYW
Sbjct: 605 SQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 222/438 (50%), Gaps = 65/438 (14%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPAR- 112
KP+ I N I +R+G D AL VF+ M ++++++N+++ G DP+R
Sbjct: 54 KPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGI----SKDPSRM 109
Query: 113 ----QVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNG 168
Q+FD++P+ D S+N+M+S YVRN + A++ F+ MP +D SWNTM++GYA+ G
Sbjct: 110 MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRG 169
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ AR +F M+EKNE+SWN +++ Y++ G +E+A F+ VV+W +++ G++K
Sbjct: 170 EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMK 229
Query: 229 QKRLGDAKWIFDRMPV-RDEVSWNTMITGYAQNNYLAEAQRLF----------------- 270
K++ A+ +F M V ++ V+WN MI+GY +N+ + +LF
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 271 ----------------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ DV T+++S Y + G++ +A +F+ M +K+
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNV-ASWNTMIT---GYAQSGEITHARNLFD 364
V+WNAMI+GY Q D A LF M + W T + +G + F+
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 365 RM-------PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
M PQ D + ++ ++G E++L+L M R + + F ++L C
Sbjct: 410 SMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMPF---RPHAAVFGTLLGACR 464
Query: 418 NLASLELGKQLHGQLVKV 435
++EL + +L+++
Sbjct: 465 VHKNVELAEFAAEKLLQL 482
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 163/344 (47%), Gaps = 15/344 (4%)
Query: 263 LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ- 321
L + L + + +F +++ V++G +D A +F M KNT++WN+++ G +
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
RM A +LF+ + + S+N M++ Y ++ A++ FDRMP D SW +I GY
Sbjct: 106 PSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGY 165
Query: 382 AQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGC 441
A+ G E + LF M N + +++S LE KV G
Sbjct: 166 ARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGV 217
Query: 442 FVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
A++ Y K VE A F+++ V+K++++WN MI+GY + +D L LF +M
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
GI+P+ + L CS ++ G + +++ + + T ++ + + G L
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELG 336
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
+A L + M + D W A++ Y + A+KA + EM
Sbjct: 337 DAWKLFEVMK-KKDVVAWNAMISG---YAQHGNADKALCLFREM 376
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust.
Identities = 291/741 (39%), Positives = 419/741 (56%), Gaps = 60/741 (8%)
Query: 98 MISGYLLNGQLDP---------ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
M S YL+N ++ AR++FD+MP R SWN ++S Y + + + F+
Sbjct: 46 MFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQ 105
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEA 204
+P+RD VSW TM+ GY G A R+ M +E + + +LA+ +E
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETG 165
Query: 205 ----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQN 260
+ + V NSL+ + K AK++FDRM VRD SWN MI + Q
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVS-- 311
+ A FE+ +D+ TW +M+SG+ Q G A IF M P++ T++
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 312 -------------------------------WNAMIAGYVQTKRMDMARELFEAMTCKN- 339
NA+I+ Y + ++ AR L E K+
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 340 -VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK 398
+ + ++ GY + G++ A+N+F + D ++W A+I GY Q G +++ LF M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 399 RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G+R N ++LS ++LASL GKQ+HG VK G V NAL+ MY K G++
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 459 EAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
A AF+ I ++D +SW +MI A+HG ++AL LFE+M G++PD IT VG+ SAC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 518 SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+H GLV +G +YF M +IP HY CMVDL GRAG L EAQ ++ MP EPD T
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 578 WGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRD 637
WG+LL ACR++ +L + AAE + +EPEN+G Y L+NLY+A G+W + +K+R M+D
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 638 RGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD 697
VKK G+SW+EV++KVH F V D HPEK+ IY ++++ ++K+ G+V T VLHD
Sbjct: 646 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 705
Query: 698 VGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLII 757
+ EE KE +LR+HSEKLA+A+G++S P +R+MKNLRVC DCH AIK ISK+VGR II
Sbjct: 706 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 765
Query: 758 LRDNNRFHHFSGGSCSCGDYW 778
+RD RFHHF G CSC DYW
Sbjct: 766 VRDTTRFHHFKDGFCSCRDYW 786
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/514 (24%), Positives = 231/514 (44%), Gaps = 92/514 (17%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN ++ + + G DS F+ +P+R SVS+ MI GY GQ A +V M + +
Sbjct: 83 WNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI 142
Query: 124 ----VSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYADAARR 175
+ +++ + + + + + K +V N++L+ YA+ G A+
Sbjct: 143 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF--------- 226
+FDRM+ ++ SWN ++A ++Q G+++ A FE A ++V+WNS++ GF
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 227 --VKQKRLGDAKWIFDRMPVRDEVS-----------------------------WNTMIT 255
+ K L D+ DR + +S N +I+
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 256 GYAQNNYLAEAQRLFEEAPVKD--VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN 313
Y++ + A+RL E+ KD + +TA++ GY++ G +++A+ IF ++ +++ V+W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 314 AMIAGYVQTKRMDMARELFEAMT------------------------------------- 336
AMI GY Q A LF +M
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 337 --CKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDSLRL 393
+V+ N +IT YA++G IT A FD + + D +SW ++I AQ G++E++L L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLV-MYC 452
F M G R + + V S C + + G+Q + V A +V ++
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 453 KCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARH 485
+ G ++EA E++ ++ DV++W ++++ H
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 194/457 (42%), Gaps = 87/457 (19%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI WN I HM+ G D A+ F M R V++N+MISG+ G A +F +M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDR 179
+ L+S + V LSA NL ++ + + S + + +G+ +G
Sbjct: 271 RDSLLSPDRFTLASV----LSACANLEKLCIGKQIHS-HIVTTGFDISG----------- 314
Query: 180 MLEKNEISWNGLLAAYVQNGRIEEACMLFESKA--NWEVVSWNSLMGGFVKQKRLGDAKW 237
I N L++ Y + G +E A L E + + ++ + +L+ G++K + AK
Sbjct: 315 ------IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF--------------------------- 270
IF + RD V+W MI GY Q+ EA LF
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 271 ------------EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIA 317
+ + V A+++ Y + G + A FD + E++TVSW +MI
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 318 GYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQHDCI- 372
Q + A ELFE M + + ++ + + +G + R FD M D I
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548
Query: 373 ----SWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLEL 424
+A ++ + ++G L E + + E++ P + S+LS C +++L
Sbjct: 549 PTLSHYACMVDLFGRAG-------LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 425 GKQLHGQLVKVGFE-AGCFVGNALLVMYCKCGSVEEA 460
GK +L+ + E +G + +AL +Y CG EEA
Sbjct: 602 GKVAAERLLLLEPENSGAY--SALANLYSACGKWEEA 636
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 26/302 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D I + + +++ G + A ++F S+ R V++ AMI GY +G A +F
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 118 MP---QR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGY 169
M QR + + M+S SLS + + K V N +++ YA+ G
Sbjct: 404 MVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGN 463
Query: 170 ADAARRIFDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESK----ANWEVVSWNSLMG 224
+A R FD + E++ +SW ++ A Q+G EEA LFE+ + +++ +
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEV-----SWNTMITGYAQNNYLAEAQRLFEEAPVK-DV 278
+ + FD M D++ + M+ + + L EAQ E+ P++ DV
Sbjct: 524 ACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDV 583
Query: 279 FTWTAMVSGY-----VQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFE 333
TW +++S + GKV R++ + +N+ +++A+ Y + + A ++ +
Sbjct: 584 VTWGSLLSACRVHKNIDLGKVAAERLLL--LEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 334 AM 335
+M
Sbjct: 642 SM 643
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust.
Identities = 279/751 (37%), Positives = 434/751 (57%), Gaps = 57/751 (7%)
Query: 83 VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA 142
F PR + N +I Y + +L+ ARQ+FD++ + D ++ M+SGY + ++ A
Sbjct: 42 TFGFQPRAHIL--NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLA 99
Query: 143 RNLFEMMP--KRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYV 196
R +FE P RD V +N M++G++ N +A +F +M + + ++ +LA
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 197 QNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVK----QKRLGDAKWIFDRMPVRDE 247
E+ C+ F +S A + N+L+ + K L A+ +FD + +DE
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPVK-DVFTWTAMVSGYVQNGKVDEA----RMIFD 302
SW TM+TGY +N Y + L E + + AM+SGYV G EA R +
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 303 AMPEKNTVSW----------------------------------NAMIAGYVQTKRMDMA 328
+ E + ++ N++++ Y + + D A
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEA 339
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
R +FE M K++ SWN +++GY SG I A+ +F M + + +SW +I+G A++G+ E
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ L+LF MKR G F+ + +CA L + G+Q H QL+K+GF++ GNAL+
Sbjct: 400 EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG VEEA F + D +SWN +IA +HG G +A+ ++E M GI+PD I
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T++ +L+ACSH GLV++G +YF SM Y + P + HY ++DLL R+G+ +A++++++
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
+PF+P A W ALL CR++G EL AA+ +F + PE+ G Y+LLSN++AA+G+W +V
Sbjct: 580 LPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEV 639
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
++VR MRDRGVKK SW+E++ +VHTF V DT HPE + +Y YL++L ++++ G+V
Sbjct: 640 ARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYV 699
Query: 689 YSTKLVLHDV-GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKH 747
T VLHDV + KE ML HSEK+AVA+G++ +P G IR+ KNLR C DCHN +
Sbjct: 700 PDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRF 759
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S +V R IILRD RFHHF G CSCG++W
Sbjct: 760 LSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 163/403 (40%), Gaps = 92/403 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS-VSYNAMISGYL--------------- 103
D R W +T +++NG D + M V+YNAMISGY+
Sbjct: 218 DERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRM 277
Query: 104 --------------------LNGQLDPARQVFDQMPQRDLVSW---NVMISGYVRNKSLS 140
G L +QV + +R+ S+ N ++S Y +
Sbjct: 278 VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFD 337
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGR 200
AR +FE MP +D+VSWN +LSGY +G+ A+ IF M EKN +SW +++ +NG
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 201 IEEACMLFE--SKANWEVVSW-------------------------------------NS 221
EE LF + +E + N+
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA 457
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----D 277
L+ + K + +A+ +F MP D VSWN +I Q+ + AEA ++EE K D
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNA-----MIAGYVQTKRMDMARELF 332
T +++ G VD+ R FD+M + A +I ++ + A +
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 333 EAMTCKNVAS-WNTMITGYAQSGE----ITHARNLFDRMPQHD 370
E++ K A W +++G G I A LF +P+HD
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 35/159 (22%)
Query: 409 FTSVLSTCANL--ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+ + L C L SL+L + +HG ++ GF+ + N L+ +YCK + A F+E
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 467 IVD---------------------------------KDVISWNTMIAGYARHGFGKDALM 493
I + +D + +N MI G++ + G A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
LF MK G KPD+ T +L+ + EK F++
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHA 173
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D + N IT + + G + A VF +MP SVS+NA+I+ +G A V+++
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
M ++ + + D ++ T+L+ + G D R+ F
Sbjct: 509 MLKKGI---------------------------RPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 178 DRMLEKNEIS-----WNGLLAAYVQNGRIEEACMLFES---KANWEVVSWNSLMGG 225
D M I + L+ ++G+ +A + ES K E+ W +L+ G
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEI--WEALLSG 595
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 518 bits (1334), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/667 (40%), Positives = 393/667 (58%), Gaps = 47/667 (7%)
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESK 211
R+V+ N +LS D AR +F+++ + + ++ Y ++ R+ +A LF+
Sbjct: 38 REVLICNHLLSRRI-----DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM 92
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE 271
+VVSWNS++ G V+ + A +FD MP R VSW M+ G ++ + +A+RLF
Sbjct: 93 PVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFY 152
Query: 272 EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
+ PVKD W +MV GY+Q GKVD+A +F MP KN +SW MI G Q +R A +L
Sbjct: 153 QMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 332 FEAM-----------------TCKNVASWN----------------------TMITGYAQ 352
F+ M C N +++ ++IT YA
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
I +R +FD W A+++GY+ + ED+L +F M R N+S F S
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L++C+ L +L+ GK++HG VK+G E FVGN+L+VMY G+V +A F +I K +
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
+SWN++I G A+HG GK A ++F M + +PD+IT G+LSACSH G +EKG + FY
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 533 MNRDYGVIPNS-KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
M+ I +HYTCMVD+LGR G+L EA+ L++ M +P+ W ALL ACR++
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDV 512
Query: 592 ELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEV 651
+ EKAA IF ++ +++ YVLLSN+YA++GRW +VSK+R+KM+ G+ K G SW+ +
Sbjct: 513 DRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVI 572
Query: 652 QNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHS 711
+ K H F GD P RIY LE L KLK+ G+ + LHDV +E+KE ML YHS
Sbjct: 573 RGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHS 630
Query: 712 EKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGS 771
E+LA+A+G+++ G + VMKNLRVCEDCH IK IS +VGR I+LRD RFHHF G+
Sbjct: 631 ERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGT 690
Query: 772 CSCGDYW 778
CSCGDYW
Sbjct: 691 CSCGDYW 697
Score = 229 bits (585), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 237/450 (52%), Gaps = 23/450 (5%)
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRL 232
+R IF R + ++V +G+ + + N EV+ N L+ +R+
Sbjct: 3 SRAIFQRF------RFRAFSISHVIHGKCYRSFSVTVEFQNREVLICNHLL-----SRRI 51
Query: 233 GDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNG 292
+A+ +F+++P + MITGY ++N L +A LF+E PV+DV +W +M+SG V+ G
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 293 KVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
++ A +FD MPE++ VSW AM+ G ++ ++D A LF M K+ A+WN+M+ GY Q
Sbjct: 112 DMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 353 SGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSV 412
G++ A LF +MP + ISW +I G Q+ S ++L LF M R + PFT V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
++ CAN + +G Q+HG ++K+GF +V +L+ Y C + ++ F+E V + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 473 ISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYS 532
W +++GY+ + +DAL +F M I P+ T L++CS G ++ G E +
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MHG 350
Query: 533 MNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTE 592
+ G+ ++ +V + +G +++A ++ + F+ +W +++ C +G+
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRG- 408
Query: 593 LAEKAAEVIF------EMEPENAGMYVLLS 616
K A VIF EP+ LLS
Sbjct: 409 ---KWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 154/600 (25%), Positives = 268/600 (44%), Gaps = 100/600 (16%)
Query: 66 VAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVS 125
V I H+ + D A VFN +P Y MI+GY + +L A +FD+MP RD+VS
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 126 WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNE 185
WN MISG V ++ A LF+ MP+R VVSW M++G ++G D A R+F +M K+
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 186 ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-- 243
+WN ++ Y+Q G++++A LF+ V+SW +++ G + +R G+A +F M
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 244 -------------------------------------VRDEVSWNTMITGYAQNNYLAEA 266
+ +E ++IT YA + ++
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT---- 322
+++F+E + V WTA++SGY N K ++A IF M + + + A + +
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 323 KRMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAII 378
+D +E+ + + N+++ Y+ SG + A ++F ++ + +SW +II
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFE 438
G AQ G + + +F +M R + + FT +LS C++ LE G++L
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL---------- 449
Query: 439 AGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM 498
Y + +D+ + + M+ R G K+A L E M
Sbjct: 450 -----------FYYMSSGINH--------IDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
Query: 499 KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM-NRDYGVIPNSKHYTCMVDLLGRAG 557
+KP+++ + +LSAC V++G + ++ N D +S Y + ++ AG
Sbjct: 491 V---VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS---KSSAAYVLLSNIYASAG 544
Query: 558 RLDEAQNL----MKNMPFEPDAATWGALLG------------ACRLYGKTE-LAEKAAEV 600
R L KN + ++W + G R+Y K E L EK E+
Sbjct: 545 RWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKEL 604
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/572 (43%), Positives = 357/572 (62%), Gaps = 9/572 (1%)
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
+V WN L+ + K L DA+ +FD MP RD SWN M+ GYA+ L EA++LF+E
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 276 KDVFTWTAMVSGYVQNGKVDEARMIFDAM-------PEKNTVSWNAMIAGYVQTKR--MD 326
KD ++WTAMV+GYV+ + +EA +++ M P TVS A V+ R +
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ + A + W++++ Y + G I ARN+FD++ + D +SW ++I Y +S
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+ LF E+ ER N F VL+ CA+L + ELGKQ+HG + +VGF+ F ++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L+ MY KCG++E A H + D++SW ++I G A++G +AL F+ + G KPD
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
+T V +LSAC+H GLVEKG E+FYS+ + + S HYTC+VDLL R+GR ++ ++++
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
MP +P W ++LG C YG +LAE+AA+ +F++EPEN YV ++N+YAA+G+W
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 539
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
+ K+R +M++ GV K G SW E++ K H F DT HP ++I +L EL K+K++G
Sbjct: 540 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V +T LVLHDV +E+KE L YHSEKLAVA+ ILS G I+V KNLR C DCH AIK
Sbjct: 600 YVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIK 659
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IS I R I +RD+ RFH F G CSCGDYW
Sbjct: 660 FISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 167/380 (43%), Gaps = 58/380 (15%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
WN + + + G A VF+ MP R S+N M++GY G L+ AR++FD+M ++D
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMPK-------------------------------- 151
SW M++GYV+ A L+ +M +
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 152 --------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
D V W++++ Y + G D AR IFD+++EK+ +SW ++ Y ++ R E
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 204 ACMLF-ESKANWEVVSWNSLMGGF-----VKQKRLGDAKWIFDRMPVRDEVSW--NTMIT 255
LF E + E + + G + + LG + D S+ ++++
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT----VS 311
Y + + A+ + + P D+ +WT+++ G QNG+ DEA FD + + T V+
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVAS-----WNTMITGYAQSGEITHARNLFDRM 366
+ +++ ++ E F ++T K+ S + ++ A+SG +++ M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 367 PQHDC-ISWAAIIAGYAQSG 385
P WA+++ G + G
Sbjct: 483 PMKPSKFLWASVLGGCSTYG 502
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 198/437 (45%), Gaps = 30/437 (6%)
Query: 93 VSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR 152
V +N ++ Y G L AR+VFD+MP RDL SWNVM++GY L AR LF+ M ++
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACM------ 206
D SW M++GY + + A ++ M N + C+
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 207 ---LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
+ + + + V W+SLM + K + +A+ IFD++ +D VSW +MI Y +++
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 264 AEAQRLFEE----APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAM 315
E LF E + +T+ +++ + + + M + + + +++
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDC 371
+ Y + ++ A+ + + ++ SW ++I G AQ+G+ A FD + + D
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP--FTSVLSTCANLASLELGKQLH 429
+++ +++ +G E L F + RL+ + +T ++ A E QL
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITE-KHRLSHTSDHYTCLVDLLARSGRFE---QLK 476
Query: 430 GQLVKVGFEAGCFVGNALLVMYCKCGSV---EEAYHAFEEIVDKDVISWNTMIAGYARHG 486
+ ++ + F+ ++L G++ EEA +I ++ +++ TM YA G
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 487 FGKDALMLFESMKTVGI 503
++ + + M+ +G+
Sbjct: 537 KWEEEGKMRKRMQEIGV 553
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 18/242 (7%)
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
LR +++ ++ S + +++ C+ +LE GK++H + GF G + N LL M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
Y KCGS+ +A F+E+ ++D+ SWN M+ GYA G ++A LF+ M + D +
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSYSW 185
Query: 511 VGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAG-------RLDEAQ 563
+++ E+ + M R +PNS+ V + A R E
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQR----VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ + D W +L+ +YGK ++A + ++ ++ + + + Y S
Sbjct: 242 GHIVRAGLDSDEVLWSSLMD---MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 624 RW 625
RW
Sbjct: 299 RW 300
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 281/765 (36%), Positives = 419/765 (54%), Gaps = 41/765 (5%)
Query: 55 PAGDWDIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSSVSYNAMISGYLLNGQL 108
P D + WN I ++ NGC + L++F M P + + G + + +
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 109 DPARQVFDQMPQ--RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
+ + ++ N +++ Y R +SLS AR +F+ M DVVSWN+++ YA+
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 167 NGYADAARRIFDRMLEK-----NEISWNGLLAAYVQNGR----IEEACMLFESKANWEVV 217
G A +F RM + + I+ +L G + C S+ +
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 218 SWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---EAP 274
N L+ + K + +A +F M V+D VSWN M+ GY+Q +A RLFE E
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 275 VK-DVFTWTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
+K DV TW+A +SGY Q G EA R + + + N V+ ++++G + +
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 330 EL------FEAMTCKNVAS-----WNTMITGYAQSGEITHARNLFDRMP--QHDCISWAA 376
E+ + KN N +I YA+ ++ AR +FD + + D ++W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 377 IIAGYAQSGYSEDSLRLFIEM--KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK 434
+I GY+Q G + +L L EM + R N + L CA+LA+L +GKQ+H ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 435 VGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
A FV N L+ MY KCGS+ +A F+ ++ K+ ++W +++ GY HG+G++AL
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
+F+ M+ +G K D +T++ +L ACSH+G++++G EYF M +GV P +HY C+VDLL
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 554 GRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYV 613
GRAGRL+ A L++ MP EP W A L CR++GK EL E AAE I E+ + G Y
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYT 685
Query: 614 LLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYA 673
LLSNLYA +GRW DV+++R MR +GVKK G SW+E TF VGD HP IY
Sbjct: 686 LLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ 745
Query: 674 YLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMK 733
L + ++K G+V T LHDV +EEK+ +L HSEKLA+AYGIL+ P G IR+ K
Sbjct: 746 VLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITK 805
Query: 734 NLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
NLRVC DCH A ++S+I+ IILRD++RFHHF GSCSC YW
Sbjct: 806 NLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 164/350 (46%), Gaps = 21/350 (6%)
Query: 346 MITGYAQSGEITHARNLFDRMPQHDC--ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGER 403
+I+ Y G ++HA +L R P D W ++I Y +G + L LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
+ F V C ++S+ G+ H + GF + FVGNAL+ MY +C S+ +A
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F+E+ DV+SWN++I YA+ G K AL +F M G +PD+IT+V +L C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
G + + +I N C+VD+ + G +DEA + NM + D +W A++
Sbjct: 245 HSLGKQ-LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMV 302
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNL----YAASGRWGDVSKVRLKMRDR 638
Y + E A + +M+ E M V+ + YA G + V +M
Sbjct: 303 AG---YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 639 GVK--KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
G+K +VT S L SVG +H ++ I+ Y + L+++G
Sbjct: 360 GIKPNEVTLISVLS-----GCASVGALMHGKE--IHCYAIKYPIDLRKNG 402
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/752 (36%), Positives = 415/752 (55%), Gaps = 87/752 (11%)
Query: 111 ARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
AR V + Q +S +++ Y +++ AR+ F+ + RDV +WN M+SGY + G +
Sbjct: 75 ARLVVSKQIQNVCISAK-LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNS 133
Query: 171 DAARRIFDRMLEKNEIS-----WNGLLAA---YVQNGRIEEACMLFESKANWEVVSWNSL 222
R F + + ++ + +L A + +I C+ + W+V SL
Sbjct: 134 SEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIH--CLALKFGFMWDVYVAASL 191
Query: 223 MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWT 282
+ + + K +G+A+ +FD MPVRD SWN MI+GY Q+ EA L D T
Sbjct: 192 IHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVV 251
Query: 283 AMVSG-----------------------------------YVQNGKVDEARMIFDAMPEK 307
+++S Y + G++ + + +FD M +
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAM--------------------------TCKNVA 341
+ +SWN++I Y ++ A LF+ M C++V
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 342 SW--------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
+ N ++ YA+ G + AR +F+ +P D ISW II+GYAQ+G++
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 431
Query: 388 EDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNA 446
+++ ++ M+ GE N+ + SVL C+ +L G +LHG+L+K G FV +
Sbjct: 432 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS 491
Query: 447 LLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
L MY KCG +E+A F +I + + WNT+IA + HG G+ A+MLF+ M G+KPD
Sbjct: 492 LADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 551
Query: 507 DITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLM 566
IT V +LSACSH+GLV++G F M DYG+ P+ KHY CMVD+ GRAG+L+ A +
Sbjct: 552 HITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI 611
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWG 626
K+M +PDA+ WGALL ACR++G +L + A+E +FE+EPE+ G +VLLSN+YA++G+W
Sbjct: 612 KSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWE 671
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDG 686
V ++R +G++K G+S +EV NKV F G+ HP + +Y L L+ KLK G
Sbjct: 672 GVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731
Query: 687 FVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIK 746
+V + VL DV ++EKEH+L HSE+LA+A+ +++ PA IR+ KNLRVC DCH+ K
Sbjct: 732 YVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTK 791
Query: 747 HISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
ISKI R II+RD+NRFHHF G CSCGDYW
Sbjct: 792 FISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 195/470 (41%), Gaps = 96/470 (20%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WD+ I + R +A +F+ MP R S+NAMISGY +G A + + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 119 PQRDLVSWNVMISGYVR----NKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAAR 174
D V+ ++S N+ ++ + + ++ N ++ YA+ G +
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 175 RIFDRMLEKNEISWNGLLAAYVQN---------------GRIEEACML------------ 207
++FDRM ++ ISWN ++ AY N RI+ C+
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 208 ----------FESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMI 254
F + W ++ N+++ + K + A+ +F+ +P D +SWNT+I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 255 TGYAQNNYLAEA----------------------------------------QRLFEEAP 274
+GYAQN + +EA RL +
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
DVF T++ Y + G++++A +F +P N+V WN +IA + + A LF+
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542
Query: 335 MTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSG 385
M + V ++ T+++ + SG + + F+ M I+ + ++ Y ++G
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
E +L+ +K + + S + ++LS C +++LGK L +V
Sbjct: 603 QLETALKF---IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 25/312 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
DI N + + + G DSA VFN +P +S+N +ISGY NG A ++++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 120 QRDLV-----SWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWNTMLSGYAQNGYA 170
+ + +W ++ + +L L + K DV ++ Y + G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 171 DAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGF 226
+ A +F ++ N + WN L+A + +G E+A MLF+ + V +++ +L+
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 227 VKQKRLGDAKWIFDRMPVRDEVS-----WNTMITGYAQNNYLAEAQRLFEEAPVK-DVFT 280
+ + +W F+ M ++ + M+ Y + L A + + ++ D
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 281 WTAMVSGYVQNGKVDEARM----IFDAMPEK--NTVSWNAMIAGYVQTKRMDMARELFEA 334
W A++S +G VD ++ +F+ PE V + M A + + +D R +
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 335 MTCKNVASWNTM 346
+ W++M
Sbjct: 683 KGLRKTPGWSSM 694
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 293/839 (34%), Positives = 456/839 (54%), Gaps = 124/839 (14%)
Query: 57 GDWDIR---QWNVAITTHMRNGCCDSALHVFNSM----PRRSSVSYNAMISGYLLNGQLD 109
GD +++ WN I+ + + G SA +F+SM R + ++ ++++ +
Sbjct: 164 GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC--SLTE 221
Query: 110 PARQVFDQM--------PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML 161
P ++ +Q+ DL + ++S + ++ SLS AR +F M R+ V+ N ++
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 162 SGYAQNGYADAARRIF---DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
G + + + A ++F + M++ + S+ LL+++ + EE + + + V++
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 219 W----------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
N L+ + K + DA+ +F M +D VSWN+MITG QN EA
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVE 401
Query: 269 LFEEAPVKDV----FT------------WT-----------------------AMVSGYV 289
++ D+ FT W A+++ Y
Sbjct: 402 RYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA 461
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC------------ 337
+ G ++E R IF +MPE + VSWN++I +++R L EA+ C
Sbjct: 462 ETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER-----SLPEAVVCFLNAQRAGQKLN 516
Query: 338 -----------------------------KNVA----SWNTMITGYAQSGEITHARNLFD 364
N+A + N +I Y + GE+ +F
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576
Query: 365 RMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
RM + D ++W ++I+GY + +L L M + G+RL+ + +VLS A++A+LE
Sbjct: 577 RMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLE 636
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G ++H V+ E+ VG+AL+ MY KCG ++ A F + ++ SWN+MI+GYA
Sbjct: 637 RGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYA 696
Query: 484 RHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
RHG G++AL LFE+MK G PD +T VG+LSACSH GL+E+G ++F SM+ YG+ P
Sbjct: 697 RHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR 756
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC-RLYG-KTELAEKAAEV 600
+H++CM D+LGRAG LD+ ++ ++ MP +P+ W +LGAC R G K EL +KAAE+
Sbjct: 757 IEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEM 816
Query: 601 IFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSV 660
+F++EPENA YVLL N+YAA GRW D+ K R KM+D VKK GYSW+ +++ VH F
Sbjct: 817 LFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVA 876
Query: 661 GDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGI 720
GD HP+ D IY L+EL K++ G+V T L+D+ +E KE +L YHSEKLAVA+ +
Sbjct: 877 GDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVL 936
Query: 721 LSIPAGR-PIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ + PIR+MKNLRVC DCH+A K+ISKI GR IILRD+NRFHHF G+CSC D+W
Sbjct: 937 AAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 176/684 (25%), Positives = 289/684 (42%), Gaps = 145/684 (21%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA------ 111
D D+ N I ++ G SA VF+ MP R+ VS+ ++SGY NG+ A
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 112 -------------------------------RQVFDQMPQR----DLVSWNVMISGYVRN 136
RQ+ M + D V NV+IS Y +
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 137 -KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGL 191
S+ A F + ++ VSWN+++S Y+Q G +A RIF M E ++ L
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 192 LAAYVQ----NGRIEEA--CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+ + R+ E C + +S ++ + L+ F K L A+ +F++M R
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLF---------------------------EEAPVKD- 277
+ V+ N ++ G + + EA +LF EE +K
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332
Query: 278 ----------------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQ 321
V +V+ Y + G + +AR +F M +K++VSWN+MI G Q
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 322 TKRMDMARELFEAM-----------------TCK----------------------NVAS 342
A E +++M +C NV+
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS-EDSLRLFIEMKRYG 401
N ++T YA++G + R +F MP+HD +SW +II A+S S +++ F+ +R G
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
++LNR F+SVLS ++L+ ELGKQ+HG +K NAL+ Y KCG ++
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 462 HAFEEIVD-KDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
F + + +D ++WN+MI+GY + AL L M G + D +LSA +
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632
Query: 521 GLVEKGTEYFYSMNR---DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAAT 577
+E+G E R + V+ S +VD+ + GRLD A MP ++ +
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSA----LVDMYSKCGRLDYALRFFNTMPVR-NSYS 687
Query: 578 WGALLGACRLYGKTELAEKAAEVI 601
W +++ +G+ E A K E +
Sbjct: 688 WNSMISGYARHGQGEEALKLFETM 711
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 225/473 (47%), Gaps = 42/473 (8%)
Query: 145 LFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA 204
L++ +DV N +++ Y + G + +AR++FD M +N +SW +++ Y +NG +EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 205 CMLFESKANWEVVSWNSLMGGFVKQ-KRLGDAKWIFDRMP---------VRDEVSWNTMI 254
+ + S ++ + +G +F R D V N +I
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 255 TGYAQN-NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNT 309
+ Y + + A F + VK+ +W +++S Y Q G A IF +M
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 310 VSWNAMIAGYVQTKRMDMARELFEAMTC--------KNVASWNTMITGYAQSGEITHARN 361
++ +++ D+ L E + C ++ + +++ +A+SG +++AR
Sbjct: 207 YTFGSLVTTACSLTEPDV--RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL-------S 414
+F++M + ++ ++ G + + E++ +LF++M ++ SP + V+
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN---SMIDVSPESYVILLSSFPEY 321
Query: 415 TCANLASLELGKQLHGQLVKVG---FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
+ A L+ G+++HG ++ G F G +GN L+ MY KCGS+ +A F + DKD
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVG--IGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
+SWN+MI G ++G +A+ ++SM+ I P T++ LS+C+ + G + +
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ-IH 438
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+ G+ N ++ L G L+E + + +MP E D +W +++GA
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 149/288 (51%), Gaps = 17/288 (5%)
Query: 338 KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEM 397
K+V N +I Y ++G+ AR +FD MP +C+SWA I++GY+++G +++L +M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 398 KRYGERLNRSPFTSVLSTCANLASLEL--GKQLHGQLVKVGFEAGCFVGNALLVMYCKC- 454
+ G N+ F SVL C + S+ + G+Q+HG + K+ + V N L+ MY KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GSV A AF +I K+ +SWN++I+ Y++ G + A +F SM+ G +P + T ++
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 515 -SACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
+ACS T + E + G++ + + +V ++G L A+ + M
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEM------EPENAGMYVLL 615
G ++G R + E+A ++ +M PE+ YV+L
Sbjct: 274 AVTLNGLMVGLVR----QKWGEEATKLFMDMNSMIDVSPES---YVIL 314
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 138/303 (45%), Gaps = 47/303 (15%)
Query: 268 RLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR--- 324
RL++ KDV+ +++ Y++ G AR +FD MP +N VSW +++GY +
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 325 -----MDMARE-LFEAM--------TCKNVASW------------------------NTM 346
DM +E +F C+ + S N +
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 347 ITGYAQS-GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN 405
I+ Y + G + +A F + + +SW +II+ Y+Q+G + R+F M+ G R
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 406 RSPFTSVLSTCANLA--SLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
F S+++T +L + L +Q+ + K G FVG+ L+ + K GS+ A
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 464 FEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT-VGIKPDDITMVGILSACSHTGL 522
F ++ ++ ++ N ++ G R +G++A LF M + + + P+ + V +LS+ L
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSL 323
Query: 523 VEK 525
E+
Sbjct: 324 AEE 326
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
H +L K + ++ N L+ Y + G A F+E+ ++ +SW +++GY+R+G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 488 GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLV 523
K+AL+ M GI + V +L AC G V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/741 (35%), Positives = 417/741 (56%), Gaps = 62/741 (8%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPK---- 151
+++ Y+ R+VFD+M +R++V+W +ISGY RN LF M
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 152 -----------------------------------RDVVSWNTMLSGYAQNGYADAARRI 176
+ + N++++ Y + G AR +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 177 FDRMLEKNEISWNGLLAAYVQNG-RIEEACMLFESKANWEVVSWNSLMG----------- 224
FD+ K+ ++WN +++ Y NG +E M + + N+ +S +S
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE-APVKDVFTWTA 283
F +Q K+ F + D+ ++ Y++ + +A RLF+E V +V +WTA
Sbjct: 312 RFTEQLHCSVVKYGF----LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367
Query: 284 MVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKN 339
M+SG++QN +EA +F M K N +++ ++ ++ ++ + ++
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERS 427
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
++ Y + G++ A +F + D ++W+A++AGYAQ+G +E ++++F E+ +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 400 YGERLNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE 458
G + N F+S+L+ CA AS+ GKQ HG +K ++ V +ALL MY K G++E
Sbjct: 488 GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 459 EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS 518
A F+ +KD++SWN+MI+GYA+HG AL +F+ MK +K D +T +G+ +AC+
Sbjct: 548 SAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT 607
Query: 519 HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATW 578
H GLVE+G +YF M RD + P +H +CMVDL RAG+L++A +++NMP + W
Sbjct: 608 HAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIW 667
Query: 579 GALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDR 638
+L ACR++ KTEL AAE I M+PE++ YVLLSN+YA SG W + +KVR M +R
Sbjct: 668 RTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 727
Query: 639 GVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV 698
VKK GYSW+EV+NK ++F GD HP KD+IY LE+L +LK G+ T VL D+
Sbjct: 728 NVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787
Query: 699 GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIIL 758
+E KE +L HSE+LA+A+G+++ P G P+ ++KNLRVC DCH IK I+KI R I++
Sbjct: 788 DDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVV 847
Query: 759 RDNNRFHHFSG-GSCSCGDYW 778
RD+NRFHHFS G CSCGD+W
Sbjct: 848 RDSNRFHHFSSDGVCSCGDFW 868
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 146/589 (24%), Positives = 253/589 (42%), Gaps = 100/589 (16%)
Query: 132 GYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF----------DRML 181
G V + L A NLF+ P RD S+ ++L G++++G A+R+F D +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 182 EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+ + + L + ++ C+ F + V SL+ ++K D + +FD
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSV--GTSLVDTYMKGSNFKDGRKVFDE 153
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTA-------------- 283
M R+ V+W T+I+GYA+N+ E LF E + FT+ A
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 284 ---------------------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQT 322
+++ Y++ G V +AR++FD K+ V+WN+MI+GY
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 323 KRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHARNLFDRMPQH----DCISW 374
A +F +M V +S+ ++I A E+ L + ++ D
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 375 AAIIAGYAQSGYSEDSLRLF--------------------------------IEMKRYGE 402
A++ Y++ D+LRLF EMKR G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
R N ++ +L+ ++ E +H Q+VK +E VG ALL Y K G VEEA
Sbjct: 394 RPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F I DKD+++W+ M+AGYA+ G + A+ +F + GIKP++ T IL+ C+ T
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
+ F+ + + + ++ + + G ++ A+ + K E D +W +++
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMI 568
Query: 583 GACRLYGKTELAEKAAEVIFEMEPENAGMY-VLLSNLYAASGRWGDVSK 630
+G+ A KA +V EM+ M V ++AA G V +
Sbjct: 569 SGYAQHGQ---AMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEE 614
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 125/243 (51%), Gaps = 2/243 (0%)
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
VA G S + +A NLFD+ P D S+ +++ G+++ G ++++ RLF+ + R
Sbjct: 27 VAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR 86
Query: 400 YGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G ++ S F+SVL A L G+QLH Q +K GF VG +L+ Y K + ++
Sbjct: 87 LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
F+E+ +++V++W T+I+GYAR+ + L LF M+ G +P+ T L +
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 520 TGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWG 579
G+ +G + + ++ G+ +++L + G + +A+ L + TW
Sbjct: 207 EGVGGRGLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWN 264
Query: 580 ALL 582
+++
Sbjct: 265 SMI 267
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/715 (35%), Positives = 389/715 (54%), Gaps = 82/715 (11%)
Query: 144 NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
N+ +P + +N ++ YA + ARR+FDR+ + N SWN LL AY + G I E
Sbjct: 31 NIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISE 90
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD----------------- 246
FE + + V+WN L+ G+ +G A ++ M +RD
Sbjct: 91 MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTLMTMLKLS 149
Query: 247 ----EVSWNTMITG--------------------YAQNNYLAEAQRLFEEAPVKDVFTWT 282
VS I G YA +++A+++F ++ +
Sbjct: 150 SSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYN 209
Query: 283 AMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------- 335
+++ G + G +++A +F M EK++VSW AMI G Q A E F M
Sbjct: 210 SLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 336 ----------TCKNVASWN----------------------TMITGYAQSGEITHARNLF 363
C + + N +I Y + + +A+ +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
DRM Q + +SW A++ GY Q+G +E+++++F++M+R G + +S CAN++SLE
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G Q HG+ + G V N+L+ +Y KCG ++++ F E+ +D +SW M++ YA
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 484 RHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNS 543
+ G + + LF+ M G+KPD +T+ G++SACS GLVEKG YF M +YG++P+
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSI 508
Query: 544 KHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE 603
HY+CM+DL R+GRL+EA + MPF PDA W LL ACR G E+ + AAE + E
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Query: 604 MEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDT 663
++P + Y LLS++YA+ G+W V+++R MR++ VKK G SW++ + K+H+FS D
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDE 628
Query: 664 LHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSI 723
P D+IYA LEEL K+ +G+ T V HDV E K ML YHSE+LA+A+G++ +
Sbjct: 629 SSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFV 688
Query: 724 PAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P+G+PIRV KNLRVC DCHNA KHIS + GR I++RD RFH F G+CSCGD+W
Sbjct: 689 PSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/581 (24%), Positives = 239/581 (41%), Gaps = 131/581 (22%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
A VF+ +P+ + S+N ++ Y G + F+++P RD V+WNV+I GY + +
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 140 SAARNLFEMMPKRDV------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW----N 189
AA + M RD V+ TML + NG+ ++I ++++ S+ +
Sbjct: 120 GAAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS 178
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
LL Y G I +A +F + V +NSLMGG + + DA +F M +D VS
Sbjct: 179 PLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVS 237
Query: 250 WNTMITGYAQNNYLAEAQRLFEEAPVKD-------------------------------- 277
W MI G AQN EA F E V+
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 278 -------VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
++ +A++ Y + + A+ +FD M +KN VSW AM+ GY QT R + A +
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 331 LFEAM-----------------TCKNVASW----------------------NTMITGYA 351
+F M C NV+S N+++T Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G+I + LF+ M D +SW A+++ YAQ G + ++++LF +M ++G + + T
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKD 471
V+S C+ +E G++ +M + G V H
Sbjct: 478 VISACSRAGLVEKGQRY------------------FKLMTSEYGIVPSIGH--------- 510
Query: 472 VISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG---TE 528
++ MI ++R G ++A+ M PD I +LSAC + G +E G E
Sbjct: 511 ---YSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Query: 529 YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
++ + YT + + G+ D L + M
Sbjct: 565 SLIELDPHH-----PAGYTLLSSIYASKGKWDSVAQLRRGM 600
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 196/487 (40%), Gaps = 106/487 (21%)
Query: 37 SKKTLKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSS---- 92
SK L + S P D D WNV I + +G +A+ +N+M R S
Sbjct: 83 SKAGLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138
Query: 93 ----------------VSYNAMISG---------YLLNGQ-----------LDPARQVFD 116
VS I G YLL G + A++VF
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRI 176
+ R+ V +N ++ G + + A LF M K D VSW M+ G AQNG A A
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 177 FDRM----LEKNEISWNGLLAAYVQNGRIEE-----ACMLFESKANWE--VVSWNSLMGG 225
F M L+ ++ + +L A G I E AC++ + N++ + ++L+
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII---RTNFQDHIYVGSALIDM 314
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTW 281
+ K K L AK +FDRM ++ VSW M+ GY Q EA ++F D +T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 282 TAMVSGYVQNGKVDE-----ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+S ++E + I + TVS N+++ Y + +D + LF M
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS-NSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DCISWAAIIAGYAQSGYSEDSLR 392
++ SW M++ YAQ G LFD+M QH D ++ +I+ +++G E R
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 393 LFIEM-KRYG-------------------------ERLNRSPF-------TSVLSTCANL 419
F M YG +N PF T++LS C N
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNK 553
Query: 420 ASLELGK 426
+LE+GK
Sbjct: 554 GNLEIGK 560
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 10/190 (5%)
Query: 426 KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARH 485
K +HG +++ F+ N ++ Y S A F+ I ++ SWN ++ Y++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 486 GFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKH 545
G + FE + D +T ++ S +GLV + + +M RD+
Sbjct: 86 GLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 546 YTCMVDLLGRAGRLDEAQNL---MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
M+ L G + + + + + FE LL +Y A +V +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL---YMYANVGCISDAKKVFY 198
Query: 603 EMEPENAGMY 612
++ N MY
Sbjct: 199 GLDDRNTVMY 208
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 278/839 (33%), Positives = 424/839 (50%), Gaps = 125/839 (14%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISG-----------------YLLNGQ 107
N I + RNG D A VF+ + + S+ AMISG Y+L
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 108 LDP--------------ARQVFDQMP--------QRDLVSWNVMISGYVRNKSLSAARNL 145
P + ++ +Q+ D N ++S Y +L +A ++
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 146 FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRI 201
F M +RD V++NT+++G +Q GY + A +F RM LE + + L+ A +G +
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 202 EEACMLFESKANWEVVSWNSLMGG----FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
L S N + G + K + A F V + V WN M+ Y
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 258 AQNNYLAEAQRLFEEAPVKDV--------------------------------------- 278
+ L + R+F + ++++
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK 338
+ + ++ Y + GK+D A I K+ VSW MIAGY Q D A F M +
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 339 NVAS---------------------------------------WNTMITGYAQSGEITHA 359
+ S N ++T Y++ G+I +
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANL 419
F++ D I+W A+++G+ QSG +E++LR+F+ M R G N F S + +
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
A+++ GKQ+H + K G+++ V NAL+ MY KCGS+ +A F E+ K+ +SWN +I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
Y++HGFG +AL F+ M ++P+ +T+VG+LSACSH GLV+KG YF SMN +YG+
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
P +HY C+VD+L RAG L A+ ++ MP +PDA W LL AC ++ E+ E AA
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EPE++ YVLLSNLYA S +W R KM+++GVKK G SW+EV+N +H+F
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYG 719
VGD HP D I+ Y ++L + + G+V +L+++ E+K+ ++ HSEKLA+++G
Sbjct: 946 VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 1005
Query: 720 ILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+LS+PA PI VMKNLRVC DCH IK +SK+ R II+RD RFHHF GG+CSC DYW
Sbjct: 1006 LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 235/558 (42%), Gaps = 76/558 (13%)
Query: 102 YLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTML 161
YL G L A +VFD+MP+R + +WN MI + LF M +V
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 162 SGYAQNGYA-----DAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFESKA 212
SG + D +I R+L + + + N L+ Y +NG ++ A +F+
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRL--- 269
+ SW +++ G K + +A +F M V M T YA ++ L+ +++
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYV-----LGIMPTPYAFSSVLSACKKIESL 304
Query: 270 ----------FEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+ D + A+VS Y G + A IF M +++ V++N +I G
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL 364
Query: 320 VQTKRMDMARELFEAM----------------------------------TCKNVASWNT 345
Q + A ELF+ M T K + N
Sbjct: 365 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 424
Query: 346 MITG-----YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
I G YA+ +I A + F + + W ++ Y +S R+F +M+
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEA 460
N+ + S+L TC L LELG+Q+H Q++K F+ +V + L+ MY K G ++ A
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 461 YHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHT 520
+ KDV+SW TMIAGY ++ F AL F M GI+ D++ + +SAC+
Sbjct: 545 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 521 GLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP----DAA 576
+++G + ++ G + +V L R G+++E+ + FE D
Sbjct: 605 QALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNI 658
Query: 577 TWGALLGACRLYGKTELA 594
W AL+ + G E A
Sbjct: 659 AWNALVSGFQQSGNNEEA 676
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 170/714 (23%), Positives = 300/714 (42%), Gaps = 110/714 (15%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEM 148
R S+V N +I Y NG +D AR+VFD + +D SW MISG +N+ + A LF
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF-- 276
Query: 149 MPKRDVVSWNTMLSGYAQNGYADAARRI-------------FDRMLEKNEISWNGLLAAY 195
D+ M + YA + A ++I + N L++ Y
Sbjct: 277 ---CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 196 VQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMI 254
G + A +F + + + V++N+L+ G + A +F RM + E NT+
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 255 T------------------------GYAQNNY--------------LAEAQRLFEEAPVK 276
+ G+A NN + A F E V+
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 277 DVFTWTAMVSGYVQNGKVDEAR---MIFDAMPEK----NTVSWNAMIAGYVQTKRMDMAR 329
+V W M+ Y G +D+ R IF M + N ++ +++ ++ +++
Sbjct: 454 NVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 330 ELFEAMTCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ + N + +I YA+ G++ A ++ R D +SW +IAGY Q
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
+ + +L F +M G R + T+ +S CA L +L+ G+Q+H Q GF + N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ +Y +CG +EE+Y AFE+ D I+WN +++G+ + G ++AL +F M GI
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
++ T + A S T +++G + + + G ++ ++ + + G + +A+
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENA-GMYVLLSNLYAASGR 624
+ + +W A++ A Y K +A + +M N +V L + +A
Sbjct: 750 FLEVS-TKNEVSWNAIINA---YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNK--------VHTFSVGDTLHPEK--DRIYAY 674
G V K G ++ E N H V D L R +
Sbjct: 806 IGLVDK--------------GIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 675 LEELEFKLKQDGFVYSTKL---VLH---DVGEEEKEHMLRYHSEKLAVAYGILS 722
++E+ +K D V+ T L V+H ++GE H+L E A Y +LS
Sbjct: 852 IQEM--PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA-TYVLLS 902
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 209/441 (47%), Gaps = 51/441 (11%)
Query: 266 AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKR- 324
A ++F+E P + +FTW M+ + E +F M +N +G ++ R
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 325 ----MDM-----ARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWA 375
D+ AR L++ + V N +I Y+++G + AR +FD + D SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 376 AIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
A+I+G +++ +++RLF +M G F+SVLS C + SLE+G+QLHG ++K+
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 436 GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLF 495
GF + +V NAL+ +Y G++ A H F + +D +++NT+I G ++ G+G+ A+ LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 496 ESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGR 555
+ M G++PD T+ ++ ACS G + +G + ++ G N+K +++L +
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 556 A----------------------------GRLDEAQN---LMKNMPFE---PDAATWGAL 581
G LD+ +N + + M E P+ T+ ++
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPE-NAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
L C G EL E+ I + + NA + +L ++YA G+ + ++ + V
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 641 ----KKVTGYSWLEVQNKVHT 657
+ GY+ +K T
Sbjct: 557 VSWTTMIAGYTQYNFDDKALT 577
Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 22/324 (6%)
Query: 305 PEKNTVSWNAMIAGYVQTK-RMDMARELFEAMTCKNVAS----WNTMITGYAQSGEITHA 359
P T+ W ++ G ++T +D R+L + + S + Y G++ A
Sbjct: 82 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 360 RNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC-AN 418
+FD MP+ +W +I A + LF+ M N F+ VL C
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 419 LASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTM 478
+ ++ +Q+H +++ G V N L+ +Y + G V+ A F+ + KD SW M
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 479 IAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYG 538
I+G +++ +A+ LF M +GI P +LSAC +E G E + + G
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLG 318
Query: 539 VIPNSKHYTC--MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
+S Y C +V L G L A+++ NM + DA T+ L+ G EK
Sbjct: 319 F--SSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG---YGEK 372
Query: 597 AAEVIFEM-----EPENAGMYVLL 615
A E+ M EP++ + L+
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLV 396
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 401 GERLNRSPFTSVLSTCANL-ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEE 459
G R N +L C SL+ G++LH Q++K+G ++ + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 460 AYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSH 519
A+ F+E+ ++ + +WN MI A + LF M + + P++ T G+L AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 520 TGLVEKGTE-----YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPD 574
+ E Y RD V+ N ++DL R G +D A+ + + + D
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNP-----LIDLYSRNGFVDLARRVFDGLRLK-D 252
Query: 575 AATWGALLGACRLYGKTELAEKAAEVIFEM 604
++W A++ K E +A + +M
Sbjct: 253 HSSWVAMISG---LSKNECEAEAIRLFCDM 279
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 139/336 (41%), Gaps = 63/336 (18%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N +T + R G + + F ++++NA++SG+ +G + A +VF +M
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 120 QRDLVS---------------------------------------WNVMISGYVRNKSLS 140
+ + + N +IS Y + S+S
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV 196
A F + ++ VSWN +++ Y+++G+ A FD+M+ N ++ G+L+A
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Query: 197 QNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSW 250
G +++ FES + +S + ++ + L AK MP++ D + W
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 251 NTMITGYA--QNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
T+++ +N + E A L E P +D T+ + + Y + K D + M E
Sbjct: 865 RTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 307 KNT-----VSW----NAMIAGYVQTKRMDMARELFE 333
K SW N++ + YV + +A E+ E
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/807 (33%), Positives = 425/807 (52%), Gaps = 126/807 (15%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVR------NKSLSAARNLFEMMP 150
A+++ YL G++ + +F++MP RD+V WN+M+ Y+ LS+A + + P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 151 KR--------------------------------DVVSWNTMLSGYAQNGYADAARRIFD 178
+++ N LS Y +G A + F
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFA 304
Query: 179 RMLEKN----EISWNGLLAAYVQNGRI----EEACMLFESKANWEVVSWNSLMGGFVKQK 230
M+E + ++++ +LA V+ + + CM + + + NSL+ + K +
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 231 RLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA----------------- 273
+ G A+ +FD M RD +SWN++I G AQN EA LF +
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 274 -----------------------PVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
V D F TA++ Y +N + EA ++F+ + V
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLV 483
Query: 311 SWNAMIAGYVQTKRMDMARELFEAM-----------------TCKNVASWNT-------- 345
+WNAM+AGY Q+ +LF M TC + + N
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 346 --------------MITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
++ Y + G+++ A+ FD +P D ++W +I+G ++G E +
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
+F +M+ G + ++ + L +LE G+Q+H +K+ FVG +L+ MY
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
KCGS+++AY F+ I ++ +WN M+ G A+HG GK+ L LF+ MK++GIKPD +T +
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF 571
G+LSACSH+GLV + ++ SM+ DYG+ P +HY+C+ D LGRAG + +A+NL+++M
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 572 EPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
E A+ + LL ACR+ G TE ++ A + E+EP ++ YVLLSN+YAA+ +W ++
Sbjct: 784 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 843
Query: 632 RLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYST 691
R M+ VKK G+SW+EV+NK+H F V D + + + IY ++++ +KQ+G+V T
Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET 903
Query: 692 KLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKI 751
L DV EEEKE L YHSEKLAVA+G+LS P PIRV+KNLRVC DCHNA+K+I+K+
Sbjct: 904 DFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKV 963
Query: 752 VGRLIILRDNNRFHHFSGGSCSCGDYW 778
R I+LRD NRFH F G CSCGDYW
Sbjct: 964 YNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/564 (25%), Positives = 265/564 (46%), Gaps = 74/564 (13%)
Query: 96 NAMISGYLLNGQLDPARQV-FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV 154
NA+ S L+ G+ AR + F++ P+R L+ N +IS Y + SL+ AR +F+ MP RD+
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 155 VSWNTMLSGYAQNGYA-----DAARRIFDRMLEKN-----EISWNGLLAAYVQNGRI--E 202
VSWN++L+ YAQ+ A +F R+L ++ ++ + +L + +G +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 203 EACMLFESKANW---EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQ 259
E+ + K E V+ +L+ ++K ++ + K +F+ MP RD V WN M+ Y +
Sbjct: 165 ESFHGYACKIGLDGDEFVA-GALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 260 NNYLAEA------------------QRLF--------------------EEAPVKDVFTW 281
+ EA RL + + V ++
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTC 337
+S Y+ +G+ F M E + V++ M+A V+ + + +++ M
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQV-HCMAL 342
Query: 338 K-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
K + N++I Y + + AR +FD M + D ISW ++IAG AQ+G +++
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLAS-LELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF+++ R G + ++ TSVL ++L L L KQ+H +K+ + FV AL+ Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
+ ++EA FE + D+++WN M+AGY + G L LF M G + DD T+
Sbjct: 463 SRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 512 GILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP 570
+ C + +G + + Y++ Y + + + ++D+ + G + AQ ++P
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 571 FEPDAATWGALLGACRLYGKTELA 594
PD W ++ C G+ E A
Sbjct: 580 V-PDDVAWTTMISGCIENGEEERA 602
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 147/630 (23%), Positives = 269/630 (42%), Gaps = 112/630 (17%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQ--LDPARQVF--DQMPQ 120
N I+ + + G A VF+ MP R VS+N++++ Y + + ++ +Q F ++ +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 121 RDLVSWNVMI----------SGYV------------------------------RNKSLS 140
+D+V + M SGYV + +
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYA----DAARRIFDRMLEKNEISWNGL----- 191
+ LFE MP RDVV WN ML Y + G+ D + L NEI+ L
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Query: 192 -----------------------------LAAYVQNGRIEEACMLF----ESKANWEVVS 218
L+ Y+ +G+ F ES + V+
Sbjct: 258 DDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVT 317
Query: 219 WNSLMGGFVKQKRLGDAKWI--------FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
+ ++ VK L + + D M N++I Y + A+ +F
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS----NSLINMYCKLRKFGFARTVF 373
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMIAGYVQTKR 324
+ +D+ +W ++++G QNG EA +F + P++ T++ + + A +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT-SVLKAASSLPEG 432
Query: 325 MDMAREL-FEAMTCKNVAS---WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ +++++ A+ NV+ +I Y+++ + A LF+R D ++W A++AG
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAG 491
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Y QS +L+LF M + GER + +V TC L ++ GKQ+H +K G++
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+V + +L MY KCG + A AF+ I D ++W TMI+G +G + A +F M+
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
+G+ PD+ T+ + A S +E+G + ++ + T +VD+ + G +D
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQ-IHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGK 590
+A L K + + W A+L +G+
Sbjct: 671 DAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 207/454 (45%), Gaps = 63/454 (13%)
Query: 183 KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRM 242
+N I+ + L+ + RI + FE N E N+L+ + K L A+ +FD+M
Sbjct: 47 RNAITSSDLMLGKCTHARI----LTFEE--NPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 243 PVRDEVSWNTMITGYAQNNY-----LAEAQRLFE-------------EAPV--------- 275
P RD VSWN+++ YAQ++ + +A LF +P+
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 276 -----------------KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAG 318
D F A+V+ Y++ GKV E +++F+ MP ++ V WN M+
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 319 YVQTKRMDMARELFEAMTCKNVASWNTMITGYAQ-SGEITHARNLFDRMPQHDCISWAAI 377
Y++ + A +L A + + A+ SG+ + A + +D S + I
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEI 280
Query: 378 I------AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
I + Y SG L+ F +M ++ F +L+T + SL LG+Q+H
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+K+G + V N+L+ MYCK A F+ + ++D+ISWN++IAG A++G +A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHT--GLVEKGTEYFYSMNRDYGVIPNSKHYTCM 549
+ LF + G+KPD TM +L A S GL + +++ + + +S T +
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN--VSDSFVSTAL 458
Query: 550 VDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLG 583
+D R + EA+ L + F D W A++
Sbjct: 459 IDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 39/238 (16%)
Query: 279 FTWTAMVSGYVQNGKVDEARMI-FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
F A+ S + GK AR++ F+ PE+ + N +I+ Y + + AR +F+ M
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPD 102
Query: 338 KNVASWNTMITGYAQSGE-----ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLR 392
+++ SWN+++ YAQS E I A LF R+ + D +
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVV-------------------- 141
Query: 393 LFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYC 452
Y R+ SP +L C + + + HG K+G + FV AL+ +Y
Sbjct: 142 -------YTSRMTLSP---MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYL 191
Query: 453 KCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITM 510
K G V+E FEE+ +DV+ WN M+ Y GF ++A+ L + + G+ P++IT+
Sbjct: 192 KFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 59 WDIRQWNVAITTHMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFD 116
+D+ W + M C D +A F+S+P V++ MISG + NG+ + A VF
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 117 QMPQRDLVSWNVMISGYVRNKSLSAA--------RNLFEMMPKRDVVSWNTMLSGYAQNG 168
QM ++ I+ + S A N ++ D +++ YA+ G
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE 209
D A +F R+ N +WN +L Q+G +E LF+
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 27/206 (13%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
+ ++ Y+ G + A+ FD +P D V+W MISG + N A ++F M V+
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWE 215
++ A+ A ++ GR A L + N
Sbjct: 616 PDEFTIATLAKASSCLTA----------------------LEQGRQIHANALKLNCTNDP 653
Query: 216 VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
V SL+ + K + DA +F R+ + + +WN M+ G AQ+ E +LF++
Sbjct: 654 FVG-TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 276 ----KDVFTWTAMVSGYVQNGKVDEA 297
D T+ ++S +G V EA
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEA 738
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 266/737 (36%), Positives = 407/737 (55%), Gaps = 89/737 (12%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKN 184
++S + R S+ A +FE + + V ++TML G+A+ D A + F RM +E
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 185 EISWNGLLA-----AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIF 239
++ LL A ++ G+ E +L +S + ++ + L + K +++ +A+ +F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGK-EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE---EAPVKDVFTW--------------- 281
DRMP RD VSWNT++ GY+QN A + + E +K F
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 282 ---------------------TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
TA+V Y + G ++ AR +FD M E+N VSWN+MI YV
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 321 QTKRMDMARELFEAM-----------------TC----------------------KNVA 341
Q + A +F+ M C +NV+
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYG 401
N++I+ Y + E+ A ++F ++ +SW A+I G+AQ+G D+L F +M+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAY 461
+ + + SV++ A L+ K +HG +++ + FV AL+ MY KCG++ A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 462 HAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG 521
F+ + ++ V +WN MI GY HGFGK AL LFE M+ IKP+ +T + ++SACSH+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 522 LVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGAL 581
LVE G + FY M +Y + + HY MVDLLGRAGRL+EA + + MP +P +GA+
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 582 LGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVK 641
LGAC+++ AEKAAE +FE+ P++ G +VLL+N+Y A+ W V +VR+ M +G++
Sbjct: 614 LGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673
Query: 642 KVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEE 701
K G S +E++N+VH+F G T HP+ +IYA+LE+L +K+ G+V T LVL V +
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVEND 732
Query: 702 EKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDN 761
KE +L HSEKLA+++G+L+ AG I V KNLRVC DCHNA K+IS + GR I++RD
Sbjct: 733 VKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDM 792
Query: 762 NRFHHFSGGSCSCGDYW 778
RFHHF G+CSCGDYW
Sbjct: 793 QRFHHFKNGACSCGDYW 809
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/722 (34%), Positives = 391/722 (54%), Gaps = 85/722 (11%)
Query: 142 ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG-- 199
AR++F + + DV +N ++ G++ N ++ +F + + ++ N A+ +
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 200 --RIEEACMLFESKA-----NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNT 252
R + A + +A + E++ ++++ + K R+ DA+ +FDRMP +D + WNT
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 253 MITGYAQNNYLAEAQRLFEE---------------------APVKDV------------- 278
MI+GY +N E+ ++F + A ++++
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 279 ------FTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF 332
+ T +S Y + GK+ +F + + V++NAMI GY +++ LF
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 333 EAMTCKNV-----------------------------------ASWNTMITG-YAQSGEI 356
+ + AS +T +T Y++ EI
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 357 THARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
AR LFD P+ SW A+I+GY Q+G +ED++ LF EM++ N T +LS C
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
A L +L LGK +H + FE+ +V AL+ MY KCGS+ EA F+ + K+ ++WN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRD 536
TMI+GY HG G++AL +F M GI P +T + +L ACSH GLV++G E F SM
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 537 YGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEK 596
YG P+ KHY CMVD+LGRAG L A ++ M EP ++ W LLGACR++ T LA
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 597 AAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVH 656
+E +FE++P+N G +VLLSN+++A + + VR + R + K GY+ +E+ H
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 657 TFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAV 716
F+ GD HP+ IY LE+LE K+++ G+ T+L LHDV EEE+E M++ HSE+LA+
Sbjct: 671 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Query: 717 AYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGD 776
A+G+++ G IR++KNLRVC DCH K ISKI R+I++RD NRFHHF G CSCGD
Sbjct: 731 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 790
Query: 777 YW 778
YW
Sbjct: 791 YW 792
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 122/563 (21%), Positives = 214/563 (38%), Gaps = 165/563 (29%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGY- 164
G + AR +F + + D+ +NV++ G+ N+S ++ ++F + K + N+ +
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 165 --AQNGYAD-------------------------------------AARRIFDRMLEKNE 185
A +G+ D AR++FDRM EK+
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 186 ISWNGLLAAYVQN-----------GRIEEACMLFESKANWEVV----------------- 217
I WN +++ Y +N I E+C ++ +++
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 218 --------SWNSLMGGFVK------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYL 263
S + ++ GF+ + ++G A + R P D V++N MI GY N
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKP--DIVAYNAMIHGYTSNGET 303
Query: 264 AEAQRLFEE----------------APV---------------KDVF-----TWTAMVSG 287
+ LF+E PV K F TA+ +
Sbjct: 304 ELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTV 363
Query: 288 YVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM------------ 335
Y + +++ AR +FD PEK+ SWNAMI+GY Q + A LF M
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 336 TC----------KNVASW-----------------NTMITGYAQSGEITHARNLFDRMPQ 368
TC ++ W +I YA+ G I AR LFD M +
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
+ ++W +I+GY G +++L +F EM G F VL C++ ++ G ++
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 429 HGQLV-KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
++ + GFE ++ + + G ++ A E + ++ W T++ H
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH- 602
Query: 487 FGKDA-LMLFESMKTVGIKPDDI 508
KD L S K + PD++
Sbjct: 603 --KDTNLARTVSEKLFELDPDNV 623
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 130/330 (39%), Gaps = 92/330 (27%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF-----------------DQMP- 119
+ A VF+ MP + ++ +N MISGY N + QVF D +P
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 120 ------------------QRDLVSWNVMISGYVRNKS----LSAARNLFEMMPKRDVVSW 157
+ S + +++G++ S + LF K D+V++
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAY 290
Query: 158 NTMLSGYAQNGYADAARRIF-DRMLEKNEISWNGLLAAYVQNGR------IEEACMLFES 210
N M+ GY NG + + +F + ML + + L++ +G I C+
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCL---- 346
Query: 211 KANW--EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
K+N+ +L + K + A+ +FD P + SWN MI+GY QN +A
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 269 LFEEA--------PV-------------------------------KDVFTWTAMVSGYV 289
LF E PV ++ TA++ Y
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGY 319
+ G + EAR +FD M +KN V+WN MI+GY
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGY 496
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 49/276 (17%)
Query: 78 DSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL----VSWNVMISGY 133
+SA +F+ P +S S+NAMISGY NG + A +F +M + + V+ ++S
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 134 VRNKSLSAARNLFEMMPKRDVVS---WNTMLSG-YAQNGYADAARRIFDRMLEKNEISWN 189
+ +LS + + +++ D S +T L G YA+ G ARR+FD M +KNE++WN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 190 GLLAAYVQNGRIEEACMLF---------ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD 240
+++ Y +G+ +EA +F + + V + G VK+
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG---------- 540
Query: 241 RMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
DE+ +N+MI Y FE + V + MV + G + A
Sbjct: 541 -----DEI-FNSMIHRYG-----------FEPS----VKHYACMVDILGRAGHLQRALQF 579
Query: 301 FDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
+AM E + W ++ K ++AR + E +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKL 615
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 43 RHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAM 98
R L +S K P+ WN I+ + +NG + A+ +F M + + V+ +
Sbjct: 374 RKLFDESPEKSLPS-------WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDV 154
+S G L + V D + D S +I Y + S++ AR LF++M K++
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 155 VSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEACMLFES 210
V+WNTM+SGY +G A IF ML +++ +L A G ++E +F S
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 23/228 (10%)
Query: 427 QLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHG 486
Q H Q++ GF + L G++ A F + DV +N ++ G++ +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 487 FGKDALMLFESM-KTVGIKPDDITMVGILSACS-----HTGLVEKGTEYFYSMNRDYGVI 540
+L +F + K+ +KP+ T +SA S G V G + + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 541 PNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEV 600
N +V + + R+++A+ + MP E D W ++ Y K E+ ++ +V
Sbjct: 158 SN------IVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISG---YRKNEMYVESIQV 207
Query: 601 IFEMEPENA---GMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
++ E+ LL L A + ++ ++RL M+ + TG
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVA----ELQELRLGMQIHSLATKTG 251
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 278/753 (36%), Positives = 413/753 (54%), Gaps = 76/753 (10%)
Query: 79 SALHVFNSMPRRSSVSYNAM---ISGYLLNG--QLDPARQVFDQMPQRDLVSWNVMISGY 133
S+ + F+ +P S Y+++ S LL+ L R + QM + L + N +S
Sbjct: 12 SSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKL 71
Query: 134 VRNKSLSA-------ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEI 186
+ LS A ++F+ + + +++ WNTM G+A + +A +++ M+
Sbjct: 72 IEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISL--- 128
Query: 187 SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD 246
GLL + ++C +SKA E + G +K LG D
Sbjct: 129 ---GLLPNSYTFPFVLKSCA--KSKAFKE---GQQIHGHVLK---LGCD---------LD 168
Query: 247 EVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPE 306
++I+ Y QN L +A ++F+++P +DV ++TA++ GY G ++ A+ +FD +P
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVAS------------------------ 342
K+ VSWNAMI+GY +T A ELF+ M NV
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 343 --W-------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYS 387
W N +I Y++ GE+ A LF+R+P D ISW +I GY
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 388 EDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK--VGFEAGCFVGN 445
+++L LF EM R GE N S+L CA+L ++++G+ +H + K G +
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
+L+ MY KCG +E A+ F I+ K + SWN MI G+A HG + LF M+ +GI+P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
DDIT VG+LSACSH+G+++ G F +M +DY + P +HY CM+DLLG +G EA+ +
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEM 528
Query: 566 MKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRW 625
+ M EPD W +LL AC+++G EL E AE + ++EPEN G YVLLSN+YA++GRW
Sbjct: 529 INMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRW 588
Query: 626 GDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD 685
+V+K R + D+G+KKV G S +E+ + VH F +GD HP IY LEE+E L++
Sbjct: 589 NEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKA 648
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
GFV T VL ++ EE KE LR+HSEKLA+A+G++S G + ++KNLRVC +CH A
Sbjct: 649 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 708
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKI R II RD RFHHF G CSC DYW
Sbjct: 709 KLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 194/413 (46%), Gaps = 38/413 (9%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ I+ +++NG + A VF+ P R VSY A+I GY G ++ A++
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGY 169
+FD++P +D+VSWN MISGY + A LF+ M K +V + T++S AQ+G
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 170 ADAARRIF----DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ R++ D N N L+ Y + G +E AC LFE +V+SWN+L+GG
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWN-TMITGYAQNNYLAEAQ-----RLFEEAPVKDVF 279
+ +A +F M E + TM++ +L ++ + +K V
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 280 TW----TAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
T+++ Y + G ++ A +F+++ K+ SWNAMI G+ R D + +LF M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 336 TCKNVA----SWNTMITGYAQSGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGY 386
+ ++ +++ + SG + R++F M Q ++ + +I SG
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG- 520
Query: 387 SEDSLRLFIEMKRYGERLNRSP----FTSVLSTCANLASLELGKQLHGQLVKV 435
LF E + + P + S+L C ++ELG+ L+K+
Sbjct: 521 ------LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 567
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/556 (41%), Positives = 356/556 (64%), Gaps = 4/556 (0%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM-LEKNEISWNGLLAAYVQ 197
++ AR LF+ +P+RDVV+W +++GY + G AR +FDR+ KN ++W +++ Y++
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR 121
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
+ ++ A MLF+ VVSWN+++ G+ + R+ A +FD MP R+ VSWN+M+
Sbjct: 122 SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKAL 181
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
Q + EA LFE P +DV +WTAMV G +NGKVDEAR +FD MPE+N +SWNAMI
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMIT 241
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
GY Q R+D A +LF+ M ++ ASWNTMITG+ ++ E+ A LFDRMP+ + ISW +
Sbjct: 242 GYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTM 301
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG 436
I GY ++ +E++L +F +M R G + N + S+LS C++LA L G+Q+H + K
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 437 FEAGCFVGNALLVMYCKCGSVEEAYHAFEE--IVDKDVISWNTMIAGYARHGFGKDALML 494
+ V +ALL MY K G + A F+ + +D+ISWN+MIA YA HG GK+A+ +
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 495 FESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLG 554
+ M+ G KP +T + +L ACSH GLVEKG E+F + RD + +HYTC+VDL G
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCG 481
Query: 555 RAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVL 614
RAGRL + N + + +GA+L AC ++ + +A++ + + E ++AG YVL
Sbjct: 482 RAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVL 541
Query: 615 LSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAY 674
+SN+YAA+G+ + +++R+KM+++G+KK G SW++V + H F VGD HP+ + + +
Sbjct: 542 MSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSI 601
Query: 675 LEELEFKLKQDGFVYS 690
L +L K++++ V S
Sbjct: 602 LSDLRNKMRKNKNVTS 617
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 249/437 (56%), Gaps = 50/437 (11%)
Query: 41 LKRHLNSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMIS 100
L R + S S P +W I + + G A +F+ +P R V++ +I+
Sbjct: 33 LVRSIYSSSSRPRVPQPEWLIGEL-------CKVGKIAEARKLFDGLPERDVVTWTHVIT 85
Query: 101 GYLLNGQLDPARQVFDQMPQR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNT 159
GY+ G + AR++FD++ R ++V+W M+SGY+R+K LS A LF+ MP+R+VVSWNT
Sbjct: 86 GYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNT 145
Query: 160 MLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSW 219
M+ GYAQ+G D A +FD M E+N +SWN ++ A VQ GRI+EA LFE +VVSW
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSW 205
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
+++ G K ++ +A+ +FD MP R+ +SWN MITGYAQNN + EA +LF+ P +D
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA 265
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---- 335
+W M++G+++N ++++A +FD MPEKN +SW MI GYV+ K + A +F M
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 336 -------------------------------TCKNVASWNTMITG-----YAQSGEITHA 359
K+V N ++T Y++SGE+ A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 360 RNLFDR--MPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
R +FD + Q D ISW ++IA YA G+ ++++ ++ +M+++G + + + ++L C+
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 418 NLASLELGKQLHGQLVK 434
+ +E G + LV+
Sbjct: 446 HAGLVEKGMEFFKDLVR 462
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 17/257 (6%)
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSG 385
++ R ++ + + V +I + G+I AR LFD +P+ D ++W +I GY + G
Sbjct: 32 NLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLG 91
Query: 386 YSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
++ LF R R N +T+++S L + + L ++ E N
Sbjct: 92 DMREARELF---DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWN 144
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
++ Y + G +++A F+E+ +++++SWN+M+ + G +A+ LFE M +
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RR 200
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
D ++ ++ + G V++ F M N + M+ + R+DEA L
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPE-----RNIISWNAMITGYAQNNRIDEADQL 255
Query: 566 MKNMPFEPDAATWGALL 582
+ MP E D A+W ++
Sbjct: 256 FQVMP-ERDFASWNTMI 271
>sp|O04590|PPR88_ARATH Pentatricopeptide repeat-containing protein At1g62260,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2
SV=1
Length = 656
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/615 (38%), Positives = 368/615 (59%), Gaps = 26/615 (4%)
Query: 61 IRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ 120
R N + +R+G A +F + R++V++N MISGY+ +++ AR++FD MP+
Sbjct: 40 FRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 121 RDLVSWNVMISGYVRN---KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIF 177
RD+V+WN MISGYV + L AR LF+ MP RD SWNTM+SGYA+N A +F
Sbjct: 100 RDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
++M E+N +SW+ ++ + QNG ++ A +LF + +L+ G +K +RL +A W
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
Query: 238 IFDR----MPVRDEV--SWNTMITGYAQNNYLAEAQRLFEEAP---------------VK 276
+ + + R+++ ++NT+I GY Q + A+ LF++ P K
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMT 336
+V +W +M+ Y++ G V AR++FD M +++T+SWN MI GYV RM+ A LF M
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMP 339
Query: 337 CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
++ SWN M++GYA G + AR+ F++ P+ +SW +IIA Y ++ ++++ LFI
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 397 MKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGS 456
M GE+ + TS+LS L +L LG Q+H +VK V NAL+ MY +CG
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGE 458
Query: 457 VEEAYHAFEEI-VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILS 515
+ E+ F+E+ + ++VI+WN MI GYA HG +AL LF SMK+ GI P IT V +L+
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLN 518
Query: 516 ACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDA 575
AC+H GLV++ F SM Y + P +HY+ +V++ G+ +EA ++ +MPFEPD
Sbjct: 519 ACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDK 578
Query: 576 ATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKM 635
WGALL ACR+Y LA AAE + +EPE++ YVLL N+YA G W + S+VR+ M
Sbjct: 579 TVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNM 638
Query: 636 RDRGVKKVTGYSWLE 650
+ +KK G SW++
Sbjct: 639 ESKRIKKERGSSWVD 653
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 260/547 (47%), Gaps = 80/547 (14%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D WN I+ + +N AL +F MP R++VS++AMI+G+ NG++D A +F +MP
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLF----EMMPKRD--VVSWNTMLSGYAQNGYADAA 173
+D +++G ++N+ LS A + ++ R+ V ++NT++ GY Q G +AA
Sbjct: 195 VKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAA 254
Query: 174 RRIFDRMLE---------------KNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVS 218
R +FD++ + KN +SWN ++ AY++ G + A +LF+ + + +S
Sbjct: 255 RCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS 314
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV 278
WN+++ G+V R+ DA +F MP RD SWN M++GYA + A+ FE+ P K
Sbjct: 315 WNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHT 374
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTV-SWNAMIAGYVQTKRMDMAREL 331
+W ++++ Y +N EA +F M P+ +T+ S + G V + ++
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQI 434
Query: 332 FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSEDS 390
+V N +IT Y++ GEI +R +FD M + + I+W A+I GYA G + ++
Sbjct: 435 VVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Query: 391 LRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVM 450
L LF MK G + F SVL+ CA+
Sbjct: 495 LNLFGSMKSNGIYPSHITFVSVLNACAH-------------------------------- 522
Query: 451 YCKCGSVEEAYHAFEEI-----VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
G V+EA F + ++ + +++++ + G ++A+ + SM +P
Sbjct: 523 ---AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEP 576
Query: 506 DDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEA 562
D +L AC ++ GL E + + +S Y + ++ G DEA
Sbjct: 577 DKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPE-----SSTPYVLLYNMYADMGLWDEA 631
Query: 563 QNLMKNM 569
+ NM
Sbjct: 632 SQVRMNM 638
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 26/301 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D WN I ++ + A +F+ MP R + S+N M+SGY G ++ AR F++
Sbjct: 309 DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEK 368
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTMLSGYAQNGYAD-- 171
P++ VSWN +I+ Y +NK A +LF M K D + ++LS A G +
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLR 426
Query: 172 ---AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF-ESKANWEVVSWNSLMGGFV 227
+I + + + N L+ Y + G I E+ +F E K EV++WN+++GG+
Sbjct: 427 LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYA 486
Query: 228 KQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFT--- 280
+A +F M +++ +++ A + EA+ F + V+
Sbjct: 487 FHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQF--VSMMSVYKIEP 544
Query: 281 ----WTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFEAM 335
++++V+ G+ +EA I +MP E + W A++ + +A EAM
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Query: 336 T 336
+
Sbjct: 605 S 605
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/685 (35%), Positives = 391/685 (57%), Gaps = 63/685 (9%)
Query: 123 LVSWNVMISGYVRNKSLSA---------ARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA 173
L+ + SG++ K + A AR +F+ +P+ + WN ++ GY++N + A
Sbjct: 44 LLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDA 103
Query: 174 RRIFDRM----LEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMG 224
++ M + + ++ LL A ++Q GR A +F + +V N L+
Sbjct: 104 LLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFVQNGLIA 162
Query: 225 GFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
+ K +RLG A+ +F+ +P+ P + + +WTA+
Sbjct: 163 LYAKCRRLGSARTVFEGLPL-----------------------------PERTIVSWTAI 193
Query: 285 VSGYVQNGKVDEARMIFDAMPEKNT-VSWNAMIA---GYVQTKRMDMARELFEAMTCKNV 340
VS Y QNG+ EA IF M + + W A+++ + + + R + ++ +
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 341 A-------SWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
S NTM YA+ G++ A+ LFD+M + I W A+I+GYA++GY+ +++ +
Sbjct: 254 EIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM R + TS +S CA + SLE + ++ + + + F+ +AL+ M+ K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CGSVE A F+ +D+DV+ W+ MI GY HG ++A+ L+ +M+ G+ P+D+T +G+
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L AC+H+G+V +G +F M D+ + P +HY C++DLLGRAG LD+A ++K MP +P
Sbjct: 431 LMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
WGALL AC+ + EL E AA+ +F ++P N G YV LSNLYAA+ W V++VR+
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
+M+++G+ K G SW+EV+ ++ F VGD HP + I +E +E +LK+ GFV +
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVG 753
LHD+ +EE E L HSE++A+AYG++S P G P+R+ KNLR C +CH A K ISK+V
Sbjct: 610 SLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVD 669
Query: 754 RLIILRDNNRFHHFSGGSCSCGDYW 778
R I++RD NRFHHF G CSCGDYW
Sbjct: 670 REIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 185/458 (40%), Gaps = 111/458 (24%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPA---------------------------- 111
A VF+ +PR +NA+I GY N A
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 112 -----------RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFE--MMPKRDVVSWN 158
QVF D+ N +I+ Y + + L +AR +FE +P+R +VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKN-EISWNGLLAAY--------VQNGRIEEACMLFE 209
++S YAQNG A IF +M + + + W L++ ++ GR A ++
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-- 249
Query: 210 SKANWEV-----VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
K E+ +S N++ + K ++ AK +FD+M + + WN MI+GYA+N Y
Sbjct: 250 -KMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 265 EAQRLFEEAPVK---------------------------------------DVFTWTAMV 285
EA +F E K DVF +A++
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 286 SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAM----TCKNVA 341
+ + G V+ AR++FD +++ V W+AMI GY R A L+ AM N
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 342 SWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAGYAQSGYSEDSLRLFIEM 397
++ ++ SG + F+RM H +A +I ++G+ + + + +
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV---I 482
Query: 398 KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV 435
K + + + ++LS C +ELG+ QL +
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI 520
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 154/376 (40%), Gaps = 70/376 (18%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP--RRSSVSYNAMISGYLLNGQLDPARQVF 115
D D+ N I + + SA VF +P R+ VS+ A++S Y NG+ A ++F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 116 DQMPQRD------------------------------------------LVSWNVMISGY 133
QM + D L+S N M Y
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---Y 267
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWN 189
+ ++ A+ LF+ M +++ WN M+SGYA+NGYA A +F M+ K + IS
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 190 GLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR 245
++A Q G +E+A ++E S +V ++L+ F K + A+ +FDR R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF 301
D V W+ MI GY + EA L+ V T+ ++ +G V E F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 302 DAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAMTCK-NVASWNTMITG-----YA 351
+ M + A + + +D A E+ + M + V W +++ +
Sbjct: 448 NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV 507
Query: 352 QSGEITHARNLFDRMP 367
+ GE A+ LF P
Sbjct: 508 ELGEYA-AQQLFSIDP 522
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
S + S++ + + A L KQ+H +L+ +G + F+ L+ G + A F++
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+ + WN +I GY+R+ +DAL+++ +M+ + PD T +L ACS ++ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPF-EPDAATWGALLGAC 585
+ ++ G + ++ L + RL A+ + + +P E +W A++ A
Sbjct: 139 -RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA- 196
Query: 586 RLYGKTELAEKAAEVIFEM 604
Y + +A E+ +M
Sbjct: 197 --YAQNGEPMEALEIFSQM 213
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/541 (41%), Positives = 334/541 (61%), Gaps = 39/541 (7%)
Query: 277 DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELF---- 332
DV +++ Y + G V+ AR +FD M E++ VSWN MI Y + + A ++F
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 333 ----------------------EAMTCK-------------NVASWNTMITGYAQSGEIT 357
+A+ CK N+ ++ YA+ G I
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A +F+ M ++W++++AGY Q+ E++L L+ +R N+ +SV+ C+
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
NLA+L GKQ+H + K GF + FV ++ + MY KCGS+ E+Y F E+ +K++ WNT
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
+I+G+A+H K+ ++LFE M+ G+ P+++T +LS C HTGLVE+G +F M Y
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G+ PN HY+CMVD+LGRAG L EA L+K++PF+P A+ WG+LL +CR+Y ELAE A
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 454
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE +FE+EPENAG +VLLSN+YAA+ +W +++K R +RD VKKV G SW+++++KVHT
Sbjct: 455 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 514
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
FSVG++ HP I + L+ L K ++ G+ S + LHDV +KE +L HSEKLA+
Sbjct: 515 FSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 574
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+G++ +P P+R+MKNLR+C DCH +K S R II+RD NRFHHFS G CSCGD+
Sbjct: 575 FGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Query: 778 W 778
W
Sbjct: 635 W 635
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 194/423 (45%), Gaps = 34/423 (8%)
Query: 87 MPRRS---SVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAAR 143
+PRRS S+S N + ++ P R ++ R+LV + + RN ++ A+
Sbjct: 25 LPRRSNTSSLSRNISVLASYDQEEVSPGRYS-NEFSNRNLVHEILQLCA--RNGAVMEAK 81
Query: 144 ----NLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNG 199
+ + + DV N +++ Y++ G+ + AR++FD MLE++ +SWN ++ Y +N
Sbjct: 82 ACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNR 141
Query: 200 RIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN--- 251
EA +F N E + L V L K + V+ + N
Sbjct: 142 MESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK--LHCLSVKTCIDLNLYV 199
Query: 252 --TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP---- 305
++ YA+ + +A ++FE K TW++MV+GYVQN +EA +++
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259
Query: 306 EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHAR 360
E+N + +++I + +++ A+ CK NV ++ + YA+ G + +
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLA 420
+F + + + W II+G+A+ ++ + LF +M++ G N F+S+LS C +
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 421 SLELGKQLHGQL-VKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTM 478
+E G++ + G + ++ + + G + EAY + I D W ++
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 479 IAG 481
+A
Sbjct: 439 LAS 441
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 399 RYGERL-NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSV 457
RY NR+ +L CA ++ K HG+++++ E + N L+ Y KCG V
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 458 EEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC 517
E A F+ ++++ ++SWNTMI Y R+ +AL +F M+ G K + T+ +LSAC
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 518 S-HTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAA 576
+ +E + + ++ + N T ++DL + G + +A + ++M + +
Sbjct: 173 GVNCDALE--CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSV 229
Query: 577 TWGALLGA 584
TW +++
Sbjct: 230 TWSSMVAG 237
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 129/298 (43%), Gaps = 45/298 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D ++ + + + G A+ VF SM +SSV++++M++GY+ N + A
Sbjct: 190 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 249
Query: 114 VFDQMPQRDLVSWNVMISGYVRNKSLSAA----RNLFEMMPK----RDVVSWNTMLSGYA 165
++ + + L +S + S AA + + ++ K +V ++ + YA
Sbjct: 250 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 309
Query: 166 QNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGG 225
+ G + IF + EKN WN +++ + ++ R +E +LFE
Sbjct: 310 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE---------------- 353
Query: 226 FVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-----DVFT 280
K ++ G +EV+++++++ + E +R F+ +V
Sbjct: 354 --KMQQDGMHP---------NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 402
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVS-WNAMIAGYVQTKRMDM----ARELFE 333
++ MV + G + EA + ++P T S W +++A K +++ A +LFE
Sbjct: 403 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE 460
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/660 (36%), Positives = 370/660 (56%), Gaps = 19/660 (2%)
Query: 138 SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
SL AR +F+ +PK + +WNT++ YA + F M+ +++ N ++
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 198 NGRIEEAC---------MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
E + M +S +V NSL+ + L A +F + +D V
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIFDAM 304
SWN+MI G+ Q +A LF++ +DV T ++S + ++ R + +
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 305 PEK----NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHAR 360
E N NAM+ Y + ++ A+ LF+AM K+ +W TM+ GYA S + AR
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 361 NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANL 419
+ + MPQ D ++W A+I+ Y Q+G ++L +F E++ + +LN+ S LS CA +
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 420 ASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMI 479
+LELG+ +H + K G V +AL+ MY KCG +E++ F + +DV W+ MI
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 480 AGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGV 539
G A HG G +A+ +F M+ +KP+ +T + ACSHTGLV++ F+ M +YG+
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 498
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
+P KHY C+VD+LGR+G L++A ++ MP P + WGALLGAC+++ LAE A
Sbjct: 499 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 558
Query: 600 VIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFS 659
+ E+EP N G +VLLSN+YA G+W +VS++R MR G+KK G S +E+ +H F
Sbjct: 559 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 618
Query: 660 VGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEE-KEHMLRYHSEKLAVAY 718
GD HP +++Y L E+ KLK +G+ VL + EEE KE L HSEKLA+ Y
Sbjct: 619 SGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICY 678
Query: 719 GILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
G++S A + IRV+KNLRVC DCH+ K IS++ R II+RD RFHHF G CSC D+W
Sbjct: 679 GLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 168/328 (51%), Gaps = 17/328 (5%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
D+ N +I Y L +A +F + ++DVVSWN+M++G+ Q G D A +F +M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 181 ---LEKNEISWNGLLAAYVQNGRIE---EAC-MLFESKANWEVVSWNSLMGGFVKQKRLG 233
++ + ++ G+L+A + +E + C + E++ N + N+++ + K +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGK 293
DAK +FD M +D V+W TM+ GYA + A+ + P KD+ W A++S Y QNGK
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 294 VDEARMIFDAMPEK-----NTVSWNAMIAGYVQTKRMDMARELFEAMTCK----NVASWN 344
+EA ++F + + N ++ + ++ Q +++ R + + N +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+I Y++ G++ +R +F+ + + D W+A+I G A G +++ +F +M+ +
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQL 432
N FT+V C++ ++ + L Q+
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQM 492
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 168/330 (50%), Gaps = 26/330 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N++I Y G LD A +VF + ++D+VSWN MI+G+V+ S A LF+ M DV
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 155 ---VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEEACM 206
V+ +LS A+ + R++ +E+N ++ N +L Y + G IE+A
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCS-YIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
LF++ + V+W +++ G+ + A+ + + MP +D V+WN +I+ Y QN EA
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 267 QRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWN-----AMI 316
+F E ++ + T + +S Q G ++ R I + +K+ + N A+I
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI-KKHGIRMNFHVTSALI 407
Query: 317 AGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC----I 372
Y + ++ +RE+F ++ ++V W+ MI G A G A ++F +M + + +
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 373 SWAAIIAGYAQSGYSEDSLRLFIEMK-RYG 401
++ + + +G +++ LF +M+ YG
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 163/386 (42%), Gaps = 60/386 (15%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K A D+ N I + G DSA VF ++ + VS+N+MI+G++ G D A +
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 114 VFDQMPQRD---------------------------------------LVSWNVMISGYV 134
+F +M D L N M+ Y
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAA 194
+ S+ A+ LF+ M ++D V+W TML GYA + +AAR + + M +K+ ++WN L++A
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 195 YVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVS 249
Y QNG+ EA ++F + ++ S + + L +WI + + +
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIR 397
Query: 250 WNTMITG-----YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM 304
N +T Y++ L +++ +F +DVF W+AM+ G +G +EA +F M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 305 PEKNT----VSWNAMIAGYVQTKRMDMARELFEAM-----TCKNVASWNTMITGYAQSGE 355
E N V++ + T +D A LF M + ++ +SG
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 356 ITHARNLFDRMPQHDCIS-WAAIIAG 380
+ A + MP S W A++
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGA 543
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 271/758 (35%), Positives = 416/758 (54%), Gaps = 60/758 (7%)
Query: 80 ALHVF-NSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLVSWNVMISGYV 134
A VF NS + YN++I GY +G + A +F +M D ++ +S
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 135 RNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNG 190
++++ + ++ K +D+ N+++ YA+ G D+AR++FD M E+N +SW
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVSWNS-----LMGGFVKQKRL--GDAKWIFDR-- 241
++ Y + ++A LF E V+ NS ++ K + L G+ + F R
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 242 -MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMI 300
+ V D + + ++ Y + N + A+RLF+E ++ AM S YV+ G EA +
Sbjct: 266 GIEVND-LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 301 FDAM------PEKNTV-----------------------------SW----NAMIAGYVQ 321
F+ M P++ ++ SW NA+I Y++
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
R D A +F+ M+ K V +WN+++ GY ++GE+ A F+ MP+ + +SW II+G
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 382 AQSGYSEDSLRLFIEMK-RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Q E+++ +F M+ + G + S+ S C +L +L+L K ++ + K G +
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+G L+ M+ +CG E A F + ++DV +W I A G + A+ LF+ M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G+KPD + VG L+ACSH GLV++G E FYSM + +GV P HY CMVDLLGRAG L+
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA L+++MP EP+ W +LL ACR+ G E+A AAE I + PE G YVLLSN+YA
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 684
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
++GRW D++KVRL M+++G++K G S ++++ K H F+ GD HPE I A L+E+
Sbjct: 685 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
+ G V VL DV E+EK ML HSEKLA+AYG++S G IR++KNLRVC D
Sbjct: 745 RASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSD 804
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH+ K SK+ R IILRDNNRFH+ G CSCGD+W
Sbjct: 805 CHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 356 ITHARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
++ A+ +F+ + C + ++I GYA SG +++ LF+ M G ++ F LS
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 415 TCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVIS 474
CA + G Q+HG +VK+G+ FV N+L+ Y +CG ++ A F+E+ +++V+S
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 475 WNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSM 533
W +MI GYAR F KDA+ LF M + + P+ +TMV ++SAC+ +E G E Y+
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG-EKVYAF 261
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
R+ G+ N + +VD+ + +D A+ L
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 226/533 (42%), Gaps = 83/533 (15%)
Query: 31 NTNPYPSKKTLKRHLNSKSRNKPKPAGDW------------DIRQWNVAITTHMRNGCCD 78
N+ P K T L++ ++++ K G D+ N + + G D
Sbjct: 127 NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELD 186
Query: 79 SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN-----VMISGY 133
SA VF+ M R+ VS+ +MI GY A +F +M + + V+ N +IS
Sbjct: 187 SARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 134 VRNKSLSAARNLFEMMPKRDVVSWNTMLSG----YAQNGYADAARRIFDRMLEKNEISWN 189
+ + L ++ + + + M+S Y + D A+R+FD N N
Sbjct: 247 AKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCN 306
Query: 190 GLLAAYVQNGRIEEACMLF-------------------ESKANWEVVSW----------- 219
+ + YV+ G EA +F S + + W
Sbjct: 307 AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 366
Query: 220 ---------NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
N+L+ ++K R A IFDRM + V+WN+++ GY +N + A F
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 271 EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK-----RM 325
E P K++ +W ++SG VQ +EA +F +M + V+ + + + + +
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 326 DMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
D+A+ ++ + KN V T++ +++ G+ A ++F+ + D +W A I
Sbjct: 487 DLAKWIYYYIE-KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKV----- 435
A +G +E ++ LF +M G + + F L+ C++ ++ GK++ ++K+
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 436 -GFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
GC V + + G +EEA E++ ++ + + WN+++A G
Sbjct: 606 EDVHYGCMVD-----LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 151/320 (47%), Gaps = 27/320 (8%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
WD N I +M+ D+A +F+ M ++ V++N++++GY+ NG++D A + F+ M
Sbjct: 371 WD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 119 PQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-----DVVSWNTMLSGYAQNGYADAA 173
P++++VSWN +ISG V+ A +F M + D V+ ++ S G D A
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 174 RRIFDRMLEKNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVK 228
+ I+ +EKN I + L+ + + G E A +F S N +V +W + +G
Sbjct: 490 KWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 229 QKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLF------EEAPVKDV 278
A +FD M + D V++ +T + + + + +F +DV
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 279 FTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM---ARELFEA 334
+ MV + G ++EA + + MP E N V WN+++A ++M A E +
Sbjct: 609 H-YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV 667
Query: 335 MTCKNVASWNTMITGYAQSG 354
+ + S+ + YA +G
Sbjct: 668 LAPERTGSYVLLSNVYASAG 687
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/573 (39%), Positives = 356/573 (62%), Gaps = 16/573 (2%)
Query: 220 NSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV---- 275
N+L+ + K A +FD MP RD ++W +++T Q N + +F
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 276 -KDVFTWTAMVSGYVQNGKVDEARMI----FDAMPEKNTVSWNAMIAGYVQTKRMDMARE 330
D F ++A+V G +D R + + + V ++++ Y + ++ A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 331 LFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDS 390
+F+++ KN SW M++GYA+SG A LF +P + SW A+I+G+ QSG ++
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 391 LRLFIEMKRYGER---LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNAL 447
+F EM+R ER L+ +S++ CANLA+ G+Q+HG ++ +GF++ F+ NAL
Sbjct: 222 FSVFTEMRR--ERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 448 LVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDD 507
+ MY KC V A F + +DV+SW ++I G A+HG + AL L++ M + G+KP++
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 508 ITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMK 567
+T VG++ ACSH G VEKG E F SM +DYG+ P+ +HYTC++DLLGR+G LDEA+NL+
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 568 NMPFEPDAATWGALLGACRLYGKTELAEKAAE-VIFEMEPENAGMYVLLSNLYAASGRWG 626
MPF PD TW ALL AC+ G+ ++ + A+ ++ + ++ Y+LLSN+YA++ WG
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
Query: 627 DVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK-QD 685
VS+ R K+ + V+K G+S +EV+ + F G+T HP K+ I+ L++LE +++ ++
Sbjct: 460 KVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRN 519
Query: 686 GFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAI 745
G+V T +LHD+ E+EKE +L +HSE+ AVAYG+L G PIR++KNLRVC DCH +
Sbjct: 520 GYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVL 579
Query: 746 KHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KHIS+I R II+RD R+HHF GG CSC D+W
Sbjct: 580 KHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 188/384 (48%), Gaps = 22/384 (5%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAA-----RRIFDRML 181
N +++ Y + + S A +F+ MP RD ++W ++L+ Q + L
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 182 EKNEISWNGLLAAYVQNGRIEEA----CMLFESK-ANWEVVSWNSLMGGFVKQKRLGDAK 236
++ ++ L+ A G I+ C S+ AN EVV +SL+ + K L AK
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAK 160
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDE 296
+FD + V++ +SW M++GYA++ EA LF PVK++++WTA++SG+VQ+GK E
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 297 ARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA-----RELFEAMTCKNVASW----NTMI 347
A +F M + + ++ + ++A R++ + S N +I
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
YA+ ++ A+++F RM D +SW ++I G AQ G +E +L L+ +M +G + N
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
F ++ C+++ +E G++L + K G LL + + G ++EA +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 467 I-VDKDVISWNTMIAGYARHGFGK 489
+ D +W +++ R G G+
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQ 424
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 166/388 (42%), Gaps = 90/388 (23%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISG----------------------- 132
N +++ Y G A QVFD+MP RD ++W +++
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 133 ----YVRNKSLSAARNLFEMMPKRDV-------------VSWNTMLSGYAQNGYADAARR 175
+V + + A NL + R V V ++++ YA+ G ++A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 176 IFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
+FD + KN ISW +++ Y ++GR EEA LF + SW +L+ GFV+ + +A
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 236 KWIF-----DRMPVRDEVSW-----------------------------------NTMIT 255
+F +R+ + D + N +I
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAM----PEKNTVS 311
YA+ + + A+ +F +DV +WT+++ G Q+G+ ++A ++D M + N V+
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDRM 366
+ +I ++ RELF++MT ++ + ++ +SG + A NL M
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 367 P-QHDCISWAAIIAGYAQSGYSEDSLRL 393
P D +WAA+++ + G + +R+
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRI 429
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL 123
W ++ + ++G + AL +F +P ++ S+ A+ISG++ +G+ A VF +M +R+
Sbjct: 174 WTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM-RRER 232
Query: 124 VSW-----------------------------------------NVMISGYVRNKSLSAA 142
V N +I Y + + AA
Sbjct: 233 VDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAA 292
Query: 143 RNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQN 198
+++F M RDVVSW +++ G AQ+G A+ A ++D M ++ NE+++ GL+ A
Sbjct: 293 KDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHV 352
Query: 199 GRIEEACMLFESKAN-----WEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEVSWNT 252
G +E+ LF+S + + L+ + L +A+ + MP DE +W
Sbjct: 353 GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAA 412
Query: 253 MITGYAQNNY----LAEAQRLFEEAPVKDVFTWTAMVSGYVQN---GKVDEAR 298
+++ + + A L +KD T+ + + Y GKV EAR
Sbjct: 413 LLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 465
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 413 LSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
L CA +L K LH +VK+G C + N L+ +Y KCG+ A F+E+ +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 473 ISWNTMIAGYARHGF-GKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTE--- 528
I+W +++ + GK + + G++PDD ++ AC++ G ++ G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 529 -YFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRL 587
+ S + V+ +S +VD+ + G L+ A+ + ++ + + +W A++
Sbjct: 130 HFIVSEYANDEVVKSS-----LVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG--- 180
Query: 588 YGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMR 636
Y K+ E+A E+ + +N + L + + SG+ + V +MR
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/616 (39%), Positives = 367/616 (59%), Gaps = 27/616 (4%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
N +I Y G L+ RQVFD+MPQR++ +WN +++G + L A +LF MP+RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 156 SWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNGLLAAYV----QNGRIEEACML 207
+WN+M+SG+AQ+ + A F M ++ NE S+ +L+A N ++ ++
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+S +V ++L+ + K + DA+ +FD M R+ VSWN++IT + QN EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 268 RLFE----------EAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA 317
+F+ E + V + A +S ++ G+ R++ + + + NA +
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSA-IKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 318 GYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAI 377
Y + R+ AR +F++M +NV + +MI+GYA + AR +F +M + + +SW A+
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 378 IAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGF 437
IAGY Q+G +E++L LF +KR F ++L CA+LA L LG Q H ++K GF
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 438 ------EAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
E FVGN+L+ MY KCG VEE Y F +++++D +SWN MI G+A++G+G +A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L LF M G KPD ITM+G+LSAC H G VE+G YF SM RD+GV P HYTCMVD
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG L+EA+++++ MP +PD+ WG+LL AC+++ L + AE + E+EP N+G
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 597
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVLLSN+YA G+W DV VR MR GV K G SW+++Q H F V D HP K +I
Sbjct: 598 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQI 657
Query: 672 YAYLEEL--EFKLKQD 685
++ L+ L E + +QD
Sbjct: 658 HSLLDILIAEMRPEQD 673
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/599 (24%), Positives = 252/599 (42%), Gaps = 130/599 (21%)
Query: 65 NVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLV 124
N I + + G + VF+ MP+R+ ++N++++G G LD A +F MP+RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTMLSG----------------- 163
+WN M+SG+ ++ A F MM K V S+ ++LS
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 164 ------------------YAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEAC 205
Y++ G + A+R+FD M ++N +SWN L+ + QNG EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 206 ----MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDE-----VSWNTMITG 256
M+ ES+ + V+ S++ + + + R+ D+ + N +
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 257 YAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
YA+ + + EA+ +F+ P+++V T+M+SGY AR++F M E+N VSWNA+I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 317 AGYVQTKRMDMARELFEAM-----------------TCKNVASW---------------- 343
AGY Q + A LF + C ++A
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 344 ------------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSL 391
N++I Y + G + +F +M + DC+SW A+I G+AQ+GY ++L
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMY 451
LF EM GE+ + VLS C + +E G+ + + G A L +
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD-------FGVAPLRDH 531
Query: 452 CKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMV 511
C M+ R GF ++A + E M ++PD +
Sbjct: 532 YTC-----------------------MVDLLGRAGFLEEAKSMIEEMP---MQPDSVIWG 565
Query: 512 GILSACSHTGLVEKGTEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEAQNLMKNM 569
+L+AC + G Y + V P NS Y + ++ G+ ++ N+ K+M
Sbjct: 566 SLLAACKVHRNITLGK---YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Score = 162 bits (411), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 224/473 (47%), Gaps = 68/473 (14%)
Query: 215 EVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP 274
E+ N L+ + K L D + +FD+MP R+ +WN+++TG + +L EA LF P
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMARE 330
+D TW +MVSG+ Q+ + +EA F M ++ N S+ ++++ M+ +
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 331 LFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGY 386
+ + +V + ++ Y++ G + A+ +FD M + +SW ++I + Q+G
Sbjct: 174 VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP 233
Query: 387 SEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGN 445
+ ++L +F M + SV+S CA+L+++++G+++HG++VK + N
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 446 ALLVMYCKCGSVEEAYHAFE-------------------------------EIVDKDVIS 474
A + MY KC ++EA F+ ++ +++V+S
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 475 WNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACS-----HTGL-----VE 524
WN +IAGY ++G ++AL LF +K + P + IL AC+ H G+ V
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
K F S D + NS ++D+ + G ++E + + M E D +W A++
Sbjct: 414 KHGFKFQSGEEDDIFVGNS-----LIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
Query: 585 CRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLSNLYAASGRWGDVSKVR 632
+ + +A E+ EM +P++ M +LS A G G V + R
Sbjct: 468 ---FAQNGYGNEALELFREMLESGEKPDHITMIGVLS----ACGHAGFVEEGR 513
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 160/384 (41%), Gaps = 87/384 (22%)
Query: 57 GDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR----------SSVSYNAMISGYLLNG 106
GD ++ WN IT +NG AL VF M S +S A +S + G
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV-G 272
Query: 107 QLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQ 166
Q R V + + D++ N + Y + + AR +F+ MP R+V++ +M+SGYA
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 167 NGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CML--------------- 207
AAR +F +M E+N +SWN L+A Y QNG EEA C+L
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 392
Query: 208 --------------------------FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
F+S ++ NSL+ +VK + + +F +
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFTWTAMVSGYVQNGKVDEA 297
M RD VSWN MI G+AQN Y EA LF E D T ++S G V+E
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 298 RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEIT 357
R F +M V+ L + TC M+ ++G +
Sbjct: 513 RHYFSSMTRDFGVA------------------PLRDHYTC--------MVDLLGRAGFLE 546
Query: 358 HARNLFDRMP-QHDCISWAAIIAG 380
A+++ + MP Q D + W +++A
Sbjct: 547 EAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 36/299 (12%)
Query: 46 NSKSRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN 105
N K RN DI N + + + A +F+SMP R+ ++ +MISGY +
Sbjct: 282 NDKLRN--------DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV----SWNTML 161
AR +F +M +R++VSWN +I+GY +N A +LF ++ + V S+ +L
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 162 SGYAQNGYADAARRIFDRML----------EKNEISWNGLLAAYVQNGRIEEACMLFESK 211
A + +L E + N L+ YV+ G +EE ++F
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 212 ANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN-TMI--------TGYAQN-- 260
+ VSWN+++ GF + +A +F M E + TMI G+ +
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 261 NYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAG 318
+Y + R F AP++D +T MV + G ++EA+ + + MP + ++V W +++A
Sbjct: 514 HYFSSMTRDFGVAPLRD--HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 113/247 (45%), Gaps = 38/247 (15%)
Query: 405 NRSPFTSVLSTC--ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVE---- 458
+ SPF +L +C + L+++ + + +H ++K GF F+ N L+ Y KCGS+E
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 459 ---------------------------EAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
EA F + ++D +WN+M++G+A+H ++A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
L F M G ++ + +LSACS + KG + +S+ + + + +VD
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ-VHSLIAKSPFLSDVYIGSALVD 195
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFE--MEPENA 609
+ + G +++AQ + M + + +W +L+ G A +++ E +EP+
Sbjct: 196 MYSKCGNVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 610 GMYVLLS 616
+ ++S
Sbjct: 255 TLASVIS 261
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/635 (38%), Positives = 372/635 (58%), Gaps = 38/635 (5%)
Query: 176 IFDRMLEKNEI-SWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQ----- 229
+F+R ++K ++ SWN ++A ++G EA + F S + S +K
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 230 -----KRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAM 284
K+ ++F D + +I Y+ L +A+++F+E P +++ +WT+M
Sbjct: 91 DIFSGKQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 285 VSGYVQNGKV----------------DEARMIFDAMPEKNTVSWNAMIA--GYVQTKRMD 326
+ GY NG D+ M D+M + +S + + G ++
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 327 MARELFEAMTCKNVASWNTMITGYAQSGE--ITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+ + F+ + V+ NT++ YA+ GE + AR +FD++ D +S+ +I++ YAQS
Sbjct: 209 VIKRGFD----RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 385 GYSEDSLRLFIEM-KRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
G S ++ +F + K N ++VL ++ +L +GK +H Q++++G E V
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
G +++ MYCKCG VE A AF+ + +K+V SW MIAGY HG AL LF +M G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ IT V +L+ACSH GL +G +F +M +GV P +HY CMVDLLGRAG L +A
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+L++ M +PD+ W +LL ACR++ ELAE + +FE++ N G Y+LLS++YA +G
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
RW DV +VR+ M++RG+ K G+S LE+ +VH F +GD HP++++IY +L EL KL
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+ G+V +T V HDV EEEKE LR HSEKLA+A+GI++ G + V+KNLRVC DCHN
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
IK ISKIV R ++RD RFHHF G CSCGDYW
Sbjct: 625 VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 40/381 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSM------PRRSS--VSYNAMISGYLLNGQLDPA 111
D+ WN I R+G AL F+SM P RSS + A S + +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 112 RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA- 170
+Q F Q D+ + +I Y L AR +F+ +PKR++VSW +M+ GY NG A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 171 DAARRIFDRMLEKNE------ISWNGLLAAYVQNGRI-----EEACMLFESKANWE--VV 217
DA D ++++N+ + GL++ R+ E+ F K ++ V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 218 SWNSLMGGFVK--QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPV 275
N+L+ + K + + A+ IFD++ +D VS+N++++ YAQ+ EA +F
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 276 KDVFTWTAMV----------SGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRM 325
V T+ A+ SG ++ GK ++I + E + + ++I Y + R+
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL-EDDVIVGTSIIDMYCKCGRV 338
Query: 326 DMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGY 381
+ AR+ F+ M KNV SW MI GY G A LF M + + I++ +++A
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 382 AQSGYSEDSLRLFIEMK-RYG 401
+ +G + R F MK R+G
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFG 419
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/690 (36%), Positives = 394/690 (57%), Gaps = 51/690 (7%)
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN 184
S +++IS Y K L A LF+ + V++W +++ + A F M
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 185 EISWNGLLAAYVQNG------RIEEACMLFESK--ANWEVVSWNSLMGGFVKQKRLGD-- 234
+ + + +++ R E+ F + + ++ + N+LM + K +G
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKI 160
Query: 235 -AKWIFDRMPVR------DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSG 287
+FD MP R ++V T I + + +R+FE P KDV ++ +++G
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRRVFEVMPRKDVVSYNTIIAG 216
Query: 288 YVQNGKVDEA-RMI-----FDAMPEKNTVSW-------------NAMIAGYVQTKRMDMA 328
Y Q+G ++A RM+ D P+ T+S I GYV K +D
Sbjct: 217 YAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID-- 274
Query: 329 RELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSE 388
+V ++++ YA+S I + +F R+ D ISW +++AGY Q+G
Sbjct: 275 ---------SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 325
Query: 389 DSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
++LRLF +M + F+SV+ CA+LA+L LGKQLHG +++ GF + F+ +AL+
Sbjct: 326 EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALV 385
Query: 449 VMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDI 508
MY KCG+++ A F+ + D +SW +I G+A HG G +A+ LFE MK G+KP+ +
Sbjct: 386 DMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 445
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
V +L+ACSH GLV++ YF SM + YG+ +HY + DLLGRAG+L+EA N +
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505
Query: 569 MPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDV 628
M EP + W LL +C ++ ELAEK AE IF ++ EN G YVL+ N+YA++GRW ++
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEM 565
Query: 629 SKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFV 688
+K+RL+MR +G++K SW+E++NK H F GD HP D+I +L+ + +++++G+V
Sbjct: 566 AKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYV 625
Query: 689 YSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHI 748
T VLHDV EE K +L HSE+LAVA+GI++ G IRV KN+R+C DCH AIK I
Sbjct: 626 ADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFI 685
Query: 749 SKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
SKI R II+RDN+RFHHF+ G+CSCGDYW
Sbjct: 686 SKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 87/419 (20%)
Query: 56 AGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF 115
+GD D++ A T M G DS VF MPR+ VSYN +I+GY +G + A ++
Sbjct: 176 SGDEDVK----AETCIMPFGI-DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMV 230
Query: 116 DQMPQRDLVSWNVMIS-------------------GYVRNKSLSAARNLFEMMPKRDVVS 156
+M DL + +S GYV K + + DV
Sbjct: 231 REMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS-----------DVYI 279
Query: 157 WNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
++++ YA++ + + R+F R+ ++ ISWN L+A YVQNGR EA LF +V
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 217 ----VSWNS---------------------LMGGF--------------VKQKRLGDAKW 237
V+++S L GGF K + A+
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 238 IFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGK 293
IFDRM V DEVSW +I G+A + + EA LFEE + V + A+++ G
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 294 VDEARMIFDAMPE----KNTVSWNAMIAGYV-QTKRMDMARELFEAMTCKNVAS-WNTMI 347
VDEA F++M + + A +A + + +++ A M + S W+T++
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
Query: 348 TGYAQSGEITHARNLFDRMPQHDCISWAAIIA---GYAQSGYSEDSLRLFIEMKRYGER 403
+ + + A + +++ D + A + YA +G ++ +L + M++ G R
Sbjct: 520 SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/732 (34%), Positives = 406/732 (55%), Gaps = 62/732 (8%)
Query: 106 GQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PKRDVVSWNTML 161
G L A +VFD++ + WN++++ ++ S + LF+ M + D +++ +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 162 SGYAQNGYADAARRIFDRML-----EKNEISWNGLLAAYVQNGRIEEACMLFESKANWEV 216
++ ++ +L E+N + N L+A Y++N R++ A +F+ +V
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-EVSWNTMITGYA--QNNYLAEAQRLFEEA 273
+SWNS++ G+V +F +M V E+ T+++ +A ++ L R
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 274 PVKDVFT-----WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
VK F+ ++ Y + G +D A+ +F M +++ VS+ +MIAGY + A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 329 RELFEAM----------------TC----------KNVASW-------------NTMITG 349
+LFE M C K V W N ++
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLF---IEMKRYGERLNR 406
YA+ G + A +F M D ISW II GY+++ Y+ ++L LF +E KR+ +
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP--DE 499
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
VL CA+L++ + G+++HG +++ G+ + V N+L+ MY KCG++ A+ F++
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I KD++SW MIAGY HGFGK+A+ LF M+ GI+ D+I+ V +L ACSH+GLV++G
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
+F M + + P +HY C+VD+L R G L +A ++NMP PDA WGALL CR
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++ +LAEK AE +FE+EPEN G YVL++N+YA + +W V ++R ++ RG++K G
Sbjct: 680 IHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 739
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHM 706
SW+E++ +V+ F GD+ +PE + I A+L ++ ++ ++G+ TK L D E EKE
Sbjct: 740 SWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEA 799
Query: 707 LRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHH 766
L HSEKLA+A GI+S G+ IRV KNLRVC DCH K +SK+ R I+LRD+NRFH
Sbjct: 800 LCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQ 859
Query: 767 FSGGSCSCGDYW 778
F G CSC +W
Sbjct: 860 FKDGHCSCRGFW 871
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 7/224 (3%)
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
+ +SG E++++L ++ ++ SVL CA+ SL+ GK++ + GF
Sbjct: 71 FCESGNLENAVKLLCVSGKWD--IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+G+ L +MY CG ++EA F+E+ + + WN ++ A+ G ++ LF+ M +
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G++ D T + + S V G E + G + +V + R+D
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVH-GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
A+ + M E D +W +++ Y LAEK V +M
Sbjct: 248 SARKVFDEMT-ERDVISWNSIING---YVSNGLAEKGLSVFVQM 287
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 54/270 (20%)
Query: 59 WDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM 118
+DI N + + + G A VF+ M + +S+N +I GY N + A +F+ +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 119 -------PQRDLVSW---------------------------------NVMISGYVRNKS 138
P V+ N ++ Y + +
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAA 194
L A LF+ + +D+VSW M++GY +G+ A +F++M +E +EIS+ LL A
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 195 YVQNGRIEEACMLF-----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV-RDEV 248
+G ++E F E K V + ++ + L A + MP+ D
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 249 SWNTMITG--YAQNNYLAE--AQRLFEEAP 274
W ++ G + LAE A+++FE P
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEP 699
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 285/838 (34%), Positives = 433/838 (51%), Gaps = 115/838 (13%)
Query: 52 KPKPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRR-----SSVSYNAMISGYLLN- 105
K +P+ I + I H+ G A+ + M R SV++++++ +
Sbjct: 17 KSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRAR 76
Query: 106 ----GQLDPARQV-FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM---PKRDVVSW 157
G+L AR + FD P D V +N +IS Y ++ + A ++FE M KRDVVSW
Sbjct: 77 DFRLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSW 134
Query: 158 NTMLSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAA-----YVQNGRIEEACMLF 208
+ M++ Y NG A ++F LE N+ + ++ A +V GR+ ++
Sbjct: 135 SAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMK 194
Query: 209 ESKANWEVVSWNSLMGGFVK-QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+V SL+ FVK + +A +FD+M + V+W MIT Q + EA
Sbjct: 195 TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAI 254
Query: 268 RLFEEAPVK----DVFTWTAMVSGYVQ--------------------------------- 290
R F + + D FT +++ S +
Sbjct: 255 RFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAK 314
Query: 291 ---NGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARE---LFEAM--------- 335
+G VD+ R +FD M + + +SW A+I GY+ K ++A E LF M
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYM--KNCNLATEAINLFSEMITQGHVEPN 372
Query: 336 ---------TCKNVAS----------------------WNTMITGYAQSGEITHARNLFD 364
C N++ N++I+ + +S + A+ F+
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 365 RMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLEL 424
+ + + +S+ + G ++ E + +L E+ ++ F S+LS AN+ S+
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 425 GKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYAR 484
G+Q+H Q+VK+G V NAL+ MY KCGS++ A F + +++VISW +MI G+A+
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAK 552
Query: 485 HGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSK 544
HGF L F M G+KP+++T V ILSACSH GLV +G +F SM D+ + P +
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612
Query: 545 HYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM 604
HY CMVDLL RAG L +A + MPF+ D W LGACR++ TEL + AA I E+
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
Query: 605 EPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTL 664
+P Y+ LSN+YA +G+W + +++R KM++R + K G SW+EV +K+H F VGDT
Sbjct: 673 DPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTA 732
Query: 665 HPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDV----GEEEKEHMLRYHSEKLAVAYGI 720
HP +IY L+ L ++K+ G+V T LVLH + E EKE +L HSEK+AVA+G+
Sbjct: 733 HPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGL 792
Query: 721 LSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+S RP+RV KNLRVC DCHNA+K+IS + GR I+LRD NRFHHF G CSC DYW
Sbjct: 793 ISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/707 (34%), Positives = 387/707 (54%), Gaps = 59/707 (8%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
+I+ Y + A + + +P + S+++++ + + +F RM I
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 189 NGLL----------AAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ +L +A+ +I C+ S + + S+ +++ R+GDA+ +
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIH--CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYVQNGKV 294
FDRM +D V+ + ++ YA+ L E R+ E ++ +W ++SG+ ++G
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 295 DEARMIFDAM------PEKNTVS---------------------------------WNAM 315
EA ++F + P++ TVS +AM
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQH----DC 371
I Y ++ + LF N ITG +++G + A +F+ + +
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
+SW +IIAG AQ+G ++L LF EM+ G + N S+L C N+A+L G+ HG
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
V+V VG+AL+ MY KCG + + F + K+++ WN+++ G++ HG K+
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVD 551
+ +FES+ +KPD I+ +LSAC GL ++G +YF M+ +YG+ P +HY+CMV+
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 552 LLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGM 611
LLGRAG+L EA +L+K MPFEPD+ WGALL +CRL +LAE AAE +F +EPEN G
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGT 593
Query: 612 YVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRI 671
YVLLSN+YAA G W +V +R KM G+KK G SW++V+N+V+T GD HP+ D+I
Sbjct: 594 YVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
Query: 672 YAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRV 731
++E+ ++++ G + LHDV E+E+E ML HSEKLAV +G+L+ P G P++V
Sbjct: 654 TEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQV 713
Query: 732 MKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+KNLR+C DCH IK IS GR I +RD NRFHHF G CSCGD+W
Sbjct: 714 IKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 190/432 (43%), Gaps = 72/432 (16%)
Query: 97 AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL-SAARNLFEMMP---KR 152
+M Y+ G++ AR+VFD+M +D+V+ + ++ Y R L R L EM +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
++VSWN +LSG+ ++GY A +F + I G V + S
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQK------IHHLGFCPDQVTVSSV------LPSVG 263
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
+ E+++ L+ G+V ++ L ++D+ + MI Y ++ ++ LF +
Sbjct: 264 DSEMLNMGRLIHGYVIKQGL-----------LKDKCVISAMIDMYGKSGHVYGIISLFNQ 312
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKRMDMA 328
+ + A ++G +NG VD+A +F+ E+ N VSW ++IAG Q + A
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 329 RELFEAM-----------------TCKNVASW----------------------NTMITG 349
ELF M C N+A+ + +I
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPF 409
YA+ G I ++ +F+ MP + + W +++ G++ G +++ + +F + R + + F
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF 492
Query: 410 TSVLSTCANLASLELG-KQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI- 467
TS+LS C + + G K + G + + ++ + + G ++EAY +E+
Sbjct: 493 TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552
Query: 468 VDKDVISWNTMI 479
+ D W ++
Sbjct: 553 FEPDSCVWGALL 564
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 177/407 (43%), Gaps = 32/407 (7%)
Query: 71 HMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP----QRDLVSW 126
+MR G A VF+ M + V+ +A++ Y G L+ ++ +M + ++VSW
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 127 NVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRI----FD 178
N ++SG+ R+ A +F+ + D V+ +++L + + R I
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 179 RMLEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ L K++ + ++ Y ++G + LF E N+ + G + + A +
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 239 FDRMPVR----DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQ 290
F+ + + VSW ++I G AQN EA LF E V V T +M+
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 291 NGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
+ R N +A+I Y + R+++++ +F M KN+ WN++
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSL 460
Query: 347 ITGYAQSGEITHARNLFDRM----PQHDCISWAAIIAGYAQSGYSEDSLRLFIEM-KRYG 401
+ G++ G+ ++F+ + + D IS+ ++++ Q G +++ + F M + YG
Sbjct: 461 MNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYG 520
Query: 402 ERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALL 448
+ ++ +++ L+ L + ++ FE V ALL
Sbjct: 521 IKPRLEHYSCMVNLLGRAGKLQEAYDL---IKEMPFEPDSCVWGALL 564
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 143/325 (44%), Gaps = 27/325 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVF----DQMPQRDL 123
I + ++G + +FN + NA I+G NG +D A ++F +Q + ++
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 124 VSWNVMISGYVRNKSLSAARNLFEMMP----KRDVVSWNTMLSG---YAQNGYADAARRI 176
VSW +I+G +N A LF M K + V+ +ML A G+ +
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 177 FDRM-LEKNEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDA 235
R+ L N + L+ Y + GRI + ++F +V WNSLM GF + +
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 236 KWIFDR-MPVR---DEVSWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFT-WTAMVS 286
IF+ M R D +S+ ++++ Q E + F EE +K ++ MV+
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 287 GYVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM----ARELFEAMTCKNVA 341
+ GK+ EA + MP E ++ W A++ +D+ A +LF + +N
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFH-LEPENPG 592
Query: 342 SWNTMITGYAQSGEITHARNLFDRM 366
++ + YA G T ++ ++M
Sbjct: 593 TYVLLSNIYAAKGMWTEVDSIRNKM 617
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/537 (43%), Positives = 326/537 (60%), Gaps = 38/537 (7%)
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTC 337
+F +++ YV+ +++A +FD MP++N +SW MI+ Y + K A EL M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 338 KNVA-----------SWNTM-------------------------ITGYAQSGEITHARN 361
NV S N M I +A+ GE A +
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+FD M D I W +II G+AQ+ S+ +L LF MKR G ++ TSVL C LA
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
LELG Q H +VK ++ + NAL+ MYCKCGS+E+A F ++ ++DVI+W+TMI+G
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
A++G+ ++AL LFE MK+ G KP+ IT+VG+L ACSH GL+E G YF SM + YG+ P
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
+HY CM+DLLG+AG+LD+A L+ M EPDA TW LLGACR+ LAE AA+ +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 453
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
++PE+AG Y LLSN+YA S +W V ++R +MRDRG+KK G SW+EV ++H F +G
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
D HP+ + L +L +L G+V T VL D+ E+ E LR+HSEKLA+A+G++
Sbjct: 514 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
++P + IR+ KNLR+C DCH K SK+ R I++RD R+HHF G CSCGDYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 46/272 (16%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H++ + R N +I+ Y+ L+ A Q+FDQMPQR+++SW MIS Y + K
Sbjct: 86 HLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQK 145
Query: 142 ARNLFEMM----PKRDVVSWNTMLSGYAQNGYADAARR---IFDRMLEKNEISWNGLLAA 194
A L +M + +V +++++L + NG +D I LE + + L+
Sbjct: 146 ALELLVLMLRDNVRPNVYTYSSVLR--SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 195 YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPV---------- 244
+ + G E+A +F+ + + WNS++GGF + R A +F RM
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 245 ---------------------------RDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKD 277
+D + N ++ Y + L +A R+F + +D
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKNT 309
V TW+ M+SG QNG EA +F+ M T
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 59/355 (16%)
Query: 11 HSSCILHQHTQSINRLQSPANTNP-YPSKKTLKRHLNSKSRNKPKPAG------DWDIRQ 63
+S C +HQ + L N P + ++ R N S + G + D+
Sbjct: 137 YSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFV 196
Query: 64 WNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQ--- 120
+ I + G + AL VF+ M ++ +N++I G+ N + D A ++F +M +
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 121 ----------------------------------RDLVSWNVMISGYVRNKSLSAARNLF 146
+DL+ N ++ Y + SL A +F
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIE 202
M +RDV++W+TM+SG AQNGY+ A ++F+RM + N I+ G+L A G +E
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 203 EACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR-DEVSWNTMITG 256
+ F S + + ++ K +L DA + + M D V+W T++
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 257 --YAQNNYLAE--AQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
+N LAE A+++ P +D T+T + + Y + K D I M ++
Sbjct: 437 CRVQRNMVLAEYAAKKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDR 490
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 129/297 (43%), Gaps = 34/297 (11%)
Query: 377 IIAGYAQSGYSED---SLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
+++ + + Y D +++ ++ +G + + ++ ++ C + ++ G + L
Sbjct: 29 LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLY 88
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
G F+ N L+ MY K + +A+ F+++ ++VISW TMI+ Y++ + AL
Sbjct: 89 FNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALE 148
Query: 494 LFESMKTVGIKPDDITMVGILSACS--------HTGLVEKGTE-----------YFYSMN 534
L M ++P+ T +L +C+ H G++++G E F +
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 535 R--------DYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMP---FEPDAATWGALLG 583
D V ++ + ++ + R D A L K M F + AT ++L
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 584 ACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGV 640
AC EL +A I + + ++ + L ++Y G D +V +M++R V
Sbjct: 269 ACTGLALLELGMQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/826 (32%), Positives = 423/826 (51%), Gaps = 112/826 (13%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSV-----SYNAMISGYLLNGQLDPARQV 114
++ QWN I+++ RN D L F M + + +Y +I + V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 115 FDQMPQRDLVS----WNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
+ + LV N ++S Y + ++ A LF++MP+R++VSWN+M+ ++ NG++
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 171 DAARRIFDRMLEKN-----------------------EI-------SW------------ 188
+ + + M+E+N EI W
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 189 -NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGF------------VKQKRLG-- 233
N L+ Y + G I A M+F+ N VVSWN+++GGF ++Q G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 234 ----DAKWIFDRMP-----------------------VRDEVSWNTMITGYAQNNYLAEA 266
D I + +P V +E+ N + YA+ L+ A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 267 QRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA---------MPEKNTVSWNAMIA 317
QR+F K V +W A++ G+ Q+ ++ R+ DA +P+ TV ++++
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQS---NDPRLSLDAHLQMKISGLLPDSFTVC--SLLS 504
Query: 318 GYVQTKRMDMARELFEAMTC----KNVASWNTMITGYAQSGEITHARNLFDRMPQHDCIS 373
+ K + + +E+ + +++ + ++++ Y GE+ + LFD M +S
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W +I GY Q+G+ + +L +F +M YG +L V C+ L SL LG++ H +
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 434 KVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALM 493
K E F+ +L+ MY K GS+ ++ F + +K SWN MI GY HG K+A+
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 494 LFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLL 553
LFE M+ G PDD+T +G+L+AC+H+GL+ +G Y M +G+ PN KHY C++D+L
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 554 GRAGRLDEAQNLM-KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMY 612
GRAG+LD+A ++ + M E D W +LL +CR++ E+ EK A +FE+EPE Y
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 613 VLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIY 672
VLLSNLYA G+W DV KVR +M + ++K G SW+E+ KV +F VG+ + I
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 864
Query: 673 AYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVM 732
+ LE K+ + G+ T V HD+ EEEK LR HSEKLA+ YG++ G IRV
Sbjct: 865 SLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVY 924
Query: 733 KNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
KNLR+C DCHNA K ISK++ R I++RDN RFHHF G CSCGDYW
Sbjct: 925 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/583 (24%), Positives = 263/583 (45%), Gaps = 75/583 (12%)
Query: 89 RRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLF-- 146
R V +I+ Y + G D +R VFD + ++L WN +IS Y RN+ F
Sbjct: 117 RNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 147 -----EMMPK---------------------------------RDVVSWNTMLSGYAQNG 168
+++P DV N ++S Y +G
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 169 YADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF--------ESKANWEVVSWN 220
+ A ++FD M E+N +SWN ++ + NG EE+ +L + +V +
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 221 SLMGGFVKQKRLGDAK----WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK 276
+++ +++ +G K W ++ V N ++ Y++ + AQ +F+ K
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 277 DVFTWTAMVSGYV----QNGKVDEARMIF----DAMPEKNTVSWNAMIAGYVQTKRMDMA 328
+V +W MV G+ +G D R + D ++ T+ NA+ + ++ +
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI-LNAVPVCFHES-FLPSL 414
Query: 329 REL----FEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
+EL + N N + YA+ G +++A+ +F + SW A+I G+AQS
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
SL ++MK G + S+LS C+ L SL LGK++HG +++ E FV
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
++L +Y CG + F+ + DK ++SWNT+I GY ++GF AL +F M GI+
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 505 PDDITMVGILSACSHTGLVEKGTE-YFYSMNRDYGVIPNSKHYTC-MVDLLGRAGRLDEA 562
I+M+ + ACS + G E + Y++ ++ + C ++D+ + G + ++
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKH---LLEDDAFIACSLIDMYAKNGSITQS 651
Query: 563 QNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEME 605
+ + E A+W A++ YG LA++A ++ EM+
Sbjct: 652 SKVFNGLK-EKSTASWNAMIMG---YGIHGLAKEAIKLFEEMQ 690
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 203/494 (41%), Gaps = 90/494 (18%)
Query: 99 ISGYLLNGQLDPARQVFDQMPQRDLVSWN----------VMISGYVRNKSLSAARNLFEM 148
IS + G LD + + + D S + +++ + K + R + ++
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 149 MP-----KRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE 203
+ + D V +++ YA G D +R +FD + KN WN ++++Y +N +E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 204 ACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNY- 262
F E++S D +P D ++ +I A +
Sbjct: 170 VLETF-----IEMISTT-------------------DLLP--DHFTYPCVIKACAGMSDV 203
Query: 263 ---LAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIA-- 317
LA + + V+DVF A+VS Y +G V +A +FD MPE+N VSWN+MI
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 318 ---GYVQTKRM----------------DMARELFEAMTC---------KNVASW------ 343
G+ + + D+A + C K V W
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
N ++ Y++ G IT+A+ +F + +SW ++ G++ G + + + +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 397 MKRYGERLNRSPFT--SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKC 454
M GE + T + + C + + L K+LH +K F V NA + Y KC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 455 GSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGIL 514
GS+ A F I K V SWN +I G+A+ + +L MK G+ PD T+ +L
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 515 SACSHTGLVEKGTE 528
SACS + G E
Sbjct: 504 SACSKLKSLRLGKE 517
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMP----RRSSVSYNAMISGYLLNGQLDPARQ 113
D + WN IT +++NG D AL VF M + +S + L L R+
Sbjct: 559 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
Query: 114 ----VFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGY 169
+ + D +I Y +N S++ + +F + ++ SWN M+ GY +G
Sbjct: 619 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 170 ADAARRIFDRMLEK----NEISWNGLLAAYVQNGRIEEA 204
A A ++F+ M +++++ G+L A +G I E
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 717
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/541 (41%), Positives = 343/541 (63%), Gaps = 9/541 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D V NT++ YA+ L EA+++FE+ P +D TWT ++SGY Q+ + +A + F+ M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 306 E----KNTVSWNAMIAGYVQTKRMDMARELFE-AMTC---KNVASWNTMITGYAQSGEIT 357
N + +++I +R +L + C NV + ++ Y + G +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
A+ +FD + + +SW A+IAG+A+ +E +L LF M R G R + + S+ C+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+ LE GK +H ++K G + F GN LL MY K GS+ +A F+ + +DV+SWN+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
++ YA+HGFGK+A+ FE M+ VGI+P++I+ + +L+ACSH+GL+++G Y+ M +D
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD- 392
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
G++P + HY +VDLLGRAG L+ A ++ MP EP AA W ALL ACR++ TEL A
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
AE +FE++P++ G +V+L N+YA+ GRW D ++VR KM++ GVKK SW+E++N +H
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 512
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP+++ I EE+ K+K+ G+V T V+ V ++E+E L+YHSEK+A+A
Sbjct: 513 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
+ +L+ P G I + KN+RVC DCH AIK SK+VGR II+RD NRFHHF G+CSC DY
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDY 632
Query: 778 W 778
W
Sbjct: 633 W 633
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 153/353 (43%), Gaps = 56/353 (15%)
Query: 82 HVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSA 141
H+ S+ R V N +++ Y G L+ AR+VF++MPQRD V+W +ISGY ++
Sbjct: 85 HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD 144
Query: 142 ARNLFEMMPK---------------------------------------RDVVSWNTMLS 162
A F M + +V + +L
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 163 GYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA----NWEVVS 218
Y + G D A+ +FD + +N++SWN L+A + + E+A LF+ S
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDE----VSWNTMITGYAQNNYLAEAQRLFEEAP 274
+ SL G L KW+ M E + NT++ YA++ + +A+++F+
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARE 330
+DV +W ++++ Y Q+G EA F+ M N +S+ +++ + +D
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 331 LFEAMTCKNVA--SWN--TMITGYAQSGEITHARNLFDRMP-QHDCISWAAII 378
+E M + +W+ T++ ++G++ A + MP + W A++
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 178/411 (43%), Gaps = 54/411 (13%)
Query: 73 RNGCCDSALHVFNSMPRRSSVSY--NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMI 130
R GCC LH F S + +A++ Y G +D A+ VFD + R+ VSWN +I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 131 SGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARRIFDRMLEKNE- 185
+G+ R A LF+ M + S+ ++ + G+ + + + M++ E
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 186 ---ISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFD-- 240
+ N LL Y ++G I +A +F+ A +VVSWNSL+ + + +A W F+
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 241 -RMPVR-DEVSWNTMITGYAQNNYLAEAQRLFE----EAPVKDVFTWTAMVSGYVQNGKV 294
R+ +R +E+S+ +++T + + L E +E + V + + + +V + G +
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 295 DEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDM----ARELFEA---MTCKNVASWNTM 346
+ A + MP E W A++ K ++ A +FE +V +N
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 347 ITG------------YAQSG----------EITHARNLF----DRMPQHDCIS--WAAII 378
+G +SG EI +A ++F +R PQ + I+ W ++
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534
Query: 379 AGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLH 429
A + GY D+ + + + + +N + ++ L + G +H
Sbjct: 535 AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIH 585
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
+R + ++L C L G+ +H +++ F +GN LL MY KCGS+EEA F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E++ +D ++W T+I+GY++H DAL+ F M G P++ T+ ++ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + + G N + ++DL R G +D+AQ + + D +W AL+
Sbjct: 179 CGHQ-LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIAG 236
Query: 585 CRLYGKTELAEKAAEVI 601
+ + EKA E+
Sbjct: 237 ---HARRSGTEKALELF 250
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/720 (35%), Positives = 402/720 (55%), Gaps = 57/720 (7%)
Query: 7 LRQLHSSCILHQHTQSINRLQSPANTNPYPSKKTLKRHLNSKSRNKPKPAGDWDIRQWNV 66
+R + + ++++H + + A +N P + + L + + + I Q N
Sbjct: 3 MRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTA-------IFQCNS 55
Query: 67 AITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSW 126
I+ H RNG A +F M RS VS+ AMIS Y NG++ A QVFD+MP R S+
Sbjct: 56 QISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 127 NVMISGYVRNK-SLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK-- 183
N MI+ ++NK L A LF +P+++ VS+ TM++G+ + G D A ++ K
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFR 175
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP 243
+ ++ N LL+ Y++ G+ EA +F+ A EVVS +S++ G+ K R+ DA+ +FDRM
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLF----EEAPVK----------------------- 276
R+ ++W MI GY + + + LF +E VK
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 277 -------------DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTK 323
D+F +++S Y + G + EA+ +F M K++VSWN++I G VQ K
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 324 RMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
++ A ELFE M K++ SW MI G++ GEI+ LF MP+ D I+W A+I+ +
Sbjct: 356 QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVS 415
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
+GY E++L F +M + N F+SVLS A+LA L G Q+HG++VK+ V
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
N+L+ MYCKCG+ +AY F I + +++S+NTMI+GY+ +GFGK AL LF +++ G
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
+P+ +T + +LSAC H G V+ G +YF SM Y + P HY CMVDLLGR+G LD+A
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDAS 595
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
NL+ MP +P + WG+LL A + + + +LAE AA+ + E+EP++A YV+LS LY+ G
Sbjct: 596 NLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
+ D ++ + + +KK G SW+ ++ +VH F GD LEE+ F LK
Sbjct: 656 KNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLN-------LEEIGFTLK 708
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 451 bits (1160), Expect = e-126, Method: Compositional matrix adjust.
Identities = 269/815 (33%), Positives = 427/815 (52%), Gaps = 98/815 (12%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLN---GQLDPA----- 111
++ WN I +NG AL + + R S VS + ++ G D
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 112 -RQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYA 170
Q+ D + DL N ++ Y R L+ AR +F+ MP RD+VSWN+++SGY+ +GY
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 171 DAARRIFDRM----LEKNEISWNGLLAAY-----VQNGRIEEACMLFESKANWEVVSWNS 221
+ A I+ + + + + + +L A+ V+ G+ L +S N VV N
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL-KSGVNSVVVVNNG 247
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK---DV 278
L+ ++K +R DA+ +FD M VRD VS+NTMI GY + + E+ R+F E + D+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL 307
Query: 279 FTWTA-----------------------------------MVSGYVQNGKVDEARMIFDA 303
T ++ ++ Y + G + AR +F++
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAM---------------------------- 335
M K+TVSWN++I+GY+Q+ + A +LF+ M
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 336 -----------TCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQS 384
C +++ N +I YA+ GE+ + +F M D ++W +I+ +
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 385 GYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVG 444
G L++ +M++ + + F L CA+LA+ LGK++H L++ G+E+ +G
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 445 NALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIK 504
NAL+ MY KCG +E + FE + +DV++W MI Y +G G+ AL F M+ GI
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD + + I+ ACSH+GLV++G F M Y + P +HY C+VDLL R+ ++ +A+
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 565 LMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
++ MP +PDA+ W ++L ACR G E AE+ + I E+ P++ G +L SN YAA +
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRK 727
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W VS +R ++D+ + K GYSW+EV VH FS GD P+ + IY LE L + +
Sbjct: 728 WDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAK 787
Query: 685 DGFVYSTKLVLHDV-GEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
+G++ + V ++ EEEK ++ HSE+LA+A+G+L+ G P++VMKNLRVC DCH
Sbjct: 788 EGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHE 847
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKIVGR I++RD NRFH F G+CSC D W
Sbjct: 848 VTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/585 (23%), Positives = 262/585 (44%), Gaps = 99/585 (16%)
Query: 129 MISGYVRNKSLSAARNLFE-MMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK---- 183
+I Y + +++ ++F + P ++V WN+++ +++NG A + ++ E
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 184 NEISWNGLLAAYVQNGRIEEACMLFESKANW----EVVSWNSLMGGFVKQKRLGDAKWIF 239
++ ++ ++ A E +++E + ++ N+L+ + + L A+ +F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 240 DRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKDVFTWTA------------ 283
D MPVRD VSWN++I+GY+ + Y EA ++ E V D FT ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 284 -----------------------MVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYV 320
+V+ Y++ + +AR +FD M +++VS+N MI GY+
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 321 QTKRMDMARELF---------EAMTCKNV-----------------------------AS 342
+ + ++ + +F + +T +V
Sbjct: 285 KLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV 344
Query: 343 WNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE 402
N +I YA+ G++ AR++F+ M D +SW +II+GY QSG ++++LF M E
Sbjct: 345 RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 403 RLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYH 462
+ + + ++S LA L+ GK LH +K G V NAL+ MY KCG V ++
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 463 AFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGL 522
F + D ++WNT+I+ R G L + M+ + PD T + L C+
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 524
Query: 523 VEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALL 582
G E + R +G + ++++ + G L+ + + + M D TW ++
Sbjct: 525 KRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMI 582
Query: 583 GACRLYGKTELAEKAAEVIFEME-----PENAGMYVLLSNLYAAS 622
A +YG+ EKA E +ME P++ V ++ +YA S
Sbjct: 583 YAYGMYGE---GEKALETFADMEKSGIVPDSV---VFIAIIYACS 621
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 187/386 (48%), Gaps = 16/386 (4%)
Query: 253 MITGYAQNNYLAEAQRLFEE-APVKDVFTWTAMVSGYVQNGKVDEARMIFDAM------P 305
+I Y+ A + +F +P K+V+ W +++ + +NG EA + + P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 306 EKNTV-SWNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMITGYAQSGEITHARNLF 363
+K T S AG + D+ E M + ++ N ++ Y++ G +T AR +F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
D MP D +SW ++I+GY+ GY E++L ++ E+K + +SVL NL ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 424 LGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYA 483
G+ LHG +K G + V N L+ MY K +A F+E+ +D +S+NTMI GY
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 484 RHGFGKDAL-MLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPN 542
+ ++++ M E++ KPD +T+ +L AC H + +Y Y+ G +
Sbjct: 285 KLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLA-KYIYNYMLKAGFVLE 341
Query: 543 SKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIF 602
S ++D+ + G + A+++ +M + D +W +++ G A K +++
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 603 EMEPENAGMYVLLSNLYAASGRWGDV 628
ME + + L+ L + S R D+
Sbjct: 401 IMEEQADHITYLM--LISVSTRLADL 424
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 147/285 (51%), Gaps = 6/285 (2%)
Query: 346 MITGYAQSGEITHARNLFDRM-PQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERL 404
+I Y+ E + ++F R+ P + W +II ++++G ++L + +++
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
++ F SV+ CA L E+G ++ Q++ +GFE+ FVGNAL+ MY + G + A F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
+E+ +D++SWN++I+GY+ HG+ ++AL ++ +K I PD T+ +L A + +V+
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
+G + + GV +V + + R +A+ + M D+ ++ ++
Sbjct: 225 QG-QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR-DSVSYNTMICG 282
Query: 585 CRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVS 629
Y K E+ E++ + E + + +S++ A G D+S
Sbjct: 283 ---YLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLS 324
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/754 (34%), Positives = 403/754 (53%), Gaps = 71/754 (9%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV- 154
N +++ Y G +VFD++ +R+ VSWN +IS + A F M +V
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 155 ------VSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS---WNGLLAAYVQNGRIEEAC 205
VS T S +++ L K E++ N L+A Y + G++ +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 206 MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DEVSWNTMITGYAQNN 261
+L S ++V+WN+++ + ++L +A M + DE + ++++ +
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 262 YLAEAQRLFEEAPV-----KDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMI 316
L + L A ++ F +A+V Y +V R +FD M ++ WNAMI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 317 AGYVQTKRMDMARELFEAM------------------TCKNVASW--------------- 343
AGY Q + A LF M C ++
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 344 -------NTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIE 396
NT++ Y++ G+I A +F +M D ++W +I GY S + ED+L L +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 397 MK-----------RYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGN 445
M+ R + N ++L +CA L++L GK++H +K VG+
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 446 ALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKP 505
AL+ MY KCG ++ + F++I K+VI+WN +I Y HG G++A+ L M G+KP
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 506 DDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNL 565
+++T + + +ACSH+G+V++G FY M DYGV P+S HY C+VDLLGRAGR+ EA L
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 566 MKNMPFEPD-AATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGR 624
M MP + + A W +LLGA R++ E+ E AA+ + ++EP A YVLL+N+Y+++G
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 625 WGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQ 684
W ++VR M+++GV+K G SW+E ++VH F GD+ HP+ +++ YLE L ++++
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
Query: 685 DGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNA 744
+G+V T VLH+V E+EKE +L HSEKLA+A+GIL+ G IRV KNLRVC DCH A
Sbjct: 797 EGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 856
Query: 745 IKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
K ISKIV R IILRD RFH F G+CSCGDYW
Sbjct: 857 TKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 48/374 (12%)
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEA 334
V V +V+ Y + G +FD + E+N VSWN++I+ ++ +MA E F
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 335 MTCKNVAS-----------------------------------------WNTMITGYAQS 353
M +NV NT++ Y +
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKL 249
Query: 354 GEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVL 413
G++ ++ L D ++W +++ Q+ ++L EM G + +SVL
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 414 STCANLASLELGKQLHGQLVKVG-FEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV 472
C++L L GK+LH +K G + FVG+AL+ MYC C V F+ + D+ +
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 473 ISWNTMIAGYARHGFGKDALMLFESM-KTVGIKPDDITMVGILSACSHTGLVEKGTEYFY 531
WN MIAGY+++ K+AL+LF M ++ G+ + TM G++ AC +G + E +
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIH 428
Query: 532 SMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKT 591
G+ + ++D+ R G++D A + M + D TW ++ Y +
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG---YVFS 484
Query: 592 ELAEKAAEVIFEME 605
E E A ++ +M+
Sbjct: 485 EHHEDALLLLHKMQ 498
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 175/409 (42%), Gaps = 74/409 (18%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKS-LSAARNLFEMM 149
+S N +++ Y G+L ++ + RDLV+WN ++S +N+ L A L EM+
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 150 -----PKRDVVS-------------WNTMLSGYA-QNGYAD------------------- 171
P +S L YA +NG D
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 172 -AARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF---ESKANWEVVSWNSLMGGFV 227
+ RR+FD M ++ WN ++A Y QN +EA +LF E A +++ ++ M G V
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG--LLANSTTMAGVV 412
Query: 228 K--------QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVF 279
++ ++ R RD NT++ Y++ + A R+F + +D+
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 280 TWTAMVSGYVQNGKVDEARMIFDAMP---------------EKNTVSWNAMIAGYVQTKR 324
TW M++GYV + ++A ++ M + N+++ ++
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 325 MDMARELFEAMTCKN-----VASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ +E+ A KN VA + ++ YA+ G + +R +FD++PQ + I+W II
Sbjct: 533 LAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQL 428
Y G ++++ L M G + N F SV + C++ ++ G ++
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 116/241 (48%), Gaps = 11/241 (4%)
Query: 374 WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLV 433
W ++ +S +++ +++M G + + F ++L A+L +ELGKQ+H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 434 KVGFEAGCF-VGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDAL 492
K G+ V N L+ +Y KCG Y F+ I +++ +SWN++I+ + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 493 MLFESMKTVGIKPDDITMVGILSACSHT----GLVEKGTEYFYSMNRDYGVIPNSKHYTC 548
F M ++P T+V +++ACS+ GL+ + Y + + NS
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE---LNSFIINT 241
Query: 549 MVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA-CRLYGKTELAEKAAEVIFE-MEP 606
+V + G+ G+L ++ L+ + D TW +L + C+ E E E++ E +EP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 607 E 607
+
Sbjct: 301 D 301
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D D N + + R G D A+ +F M R V++N MI+GY+ + + A + +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 118 MP---------------QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR----DVVSWN 158
M + + ++ ++ +L+ + + K DV +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLF 208
++ YA+ G +R++FD++ +KN I+WN ++ AY +G +EA L
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLL 606
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/528 (42%), Positives = 332/528 (62%), Gaps = 13/528 (2%)
Query: 263 LAEAQRLFE--EAPVKDVFTWTAMVSGYVQNGKVDEA-----RMIFDAMPEKNTVSWNAM 315
++ A ++F E P+ +VF W ++ GY + G A M + E +T ++ +
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHARNLFDRMPQHDC 371
I + + + + S N+++ YA G++ A +FD+MP+ D
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
++W ++I G+A++G E++L L+ EM G + + S+LS CA + +L LGK++H
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
++KVG N LL +Y +CG VEEA F+E+VDK+ +SW ++I G A +GFGK+A
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 492 LMLFESMK-TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMV 550
+ LF+ M+ T G+ P +IT VGIL ACSH G+V++G EYF M +Y + P +H+ CMV
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 551 DLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAG 610
DLL RAG++ +A +K+MP +P+ W LLGAC ++G ++LAE A I ++EP ++G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 611 MYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDR 670
YVLLSN+YA+ RW DV K+R +M GVKKV G+S +EV N+VH F +GD HP+ D
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 671 IYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIR 730
IYA L+E+ +L+ +G+V V DV EEEKE+ + YHSEK+A+A+ ++S P PI
Sbjct: 488 IYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPIT 547
Query: 731 VMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
V+KNLRVC DCH AIK +SK+ R I++RD +RFHHF GSCSC DYW
Sbjct: 548 VVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 170/398 (42%), Gaps = 72/398 (18%)
Query: 139 LSAARNLFEMMPKR-DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ 197
+S A +F + K +V WNT++ GYA+ G + +A ++ E+ +GL+
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLY------REMRVSGLVEPDTH 122
Query: 198 NGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGY 257
L ++ V + V + G ++ N+++ Y
Sbjct: 123 T-----YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYV-----------QNSLLHLY 166
Query: 258 AQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK---------- 307
A +A A ++F++ P KD+ W ++++G+ +NGK +EA ++ M K
Sbjct: 167 ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIV 226
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMP 367
+ +S A I KR+ + + + +N+ S N ++ YA+ G + A+ LFD M
Sbjct: 227 SLLSACAKIGALTLGKRVHVY--MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 368 QHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLN-RSPFTSVLSTCANLASLELGK 426
+ +SW ++I G A +G+ ++++ LF M+ L F +L C+
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS--------- 335
Query: 427 QLHGQLVKVGFEA-----------------GCFVGNALLVMYCKCGSVEEAYHAFEEI-V 468
H +VK GFE GC V + + G V++AY + + +
Sbjct: 336 --HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD-----LLARAGQVKKAYEYIKSMPM 388
Query: 469 DKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPD 506
+V+ W T++ H G L F ++ + ++P+
Sbjct: 389 QPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPN 424
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 19/252 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMM----PK 151
N+++ Y G + A +VFD+MP++DLV+WN +I+G+ N A L+ M K
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 152 RDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLAAYVQNGRIEEACML 207
D + ++LS A+ G +R+ M L +N S N LL Y + GR+EEA L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRD-----EVSWNTMITGYAQNNY 262
F+ + VSW SL+ G +A +F M + E+++ ++ +
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 263 LAEA----QRLFEEAPVKD-VFTWTAMVSGYVQNGKVDEARMIFDAMP-EKNTVSWNAMI 316
+ E +R+ EE ++ + + MV + G+V +A +MP + N V W ++
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 317 AGYVQTKRMDMA 328
D+A
Sbjct: 400 GACTVHGDSDLA 411
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 116/248 (46%), Gaps = 19/248 (7%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LE 182
N ++ Y +++A +F+ MP++D+V+WN++++G+A+NG + A ++ M ++
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 183 KNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
+ + LL+A + G + + + + S N L+ + + R+ +AK +
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 239 FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE-----EAPVKDVFTWTAMVSGYVQNGK 293
FD M ++ VSW ++I G A N + EA LF+ E + T+ ++ G
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 294 VDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAMTCK-NVASWNTMI 347
V E F M E+ + + M+ + ++ A E ++M + NV W T++
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 348 TGYAQSGE 355
G+
Sbjct: 400 GACTVHGD 407
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 71 HMRNGCCD--SALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQR----DLV 124
H+ C D SA VF+ MP + V++N++I+G+ NG+ + A ++ +M + D
Sbjct: 164 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 223
Query: 125 SWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIFDRM 180
+ ++S + +L+ + + M K R++ S N +L YA+ G + A+ +FD M
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 181 LEKNEISWNGLLAAYVQNGRIEEACMLFE 209
++KN +SW L+ NG +EA LF+
Sbjct: 284 VDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 133/338 (39%), Gaps = 60/338 (17%)
Query: 111 ARQVFDQMPQR-DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVS------------- 156
A +VF ++ + ++ WN +I GY + +A +L+ M +V
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 157 ---------------------------WNTMLSGYAQNGYADAARRIFDRMLEKNEISWN 189
N++L YA G +A ++FD+M EK+ ++WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 190 GLLAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIFDRMP-- 243
++ + +NG+ EEA L+ + + + SL+ K L K + M
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 244 --VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIF 301
R+ S N ++ YA+ + EA+ LF+E K+ +WT+++ G NG EA +F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 302 DAMPE-KNTVSWNAMIAGYV-QTKRMDMARELFEAM--------TCKNVASWNTMITGYA 351
M + + G + M +E FE + + M+ A
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 352 QSGEITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
++G++ A MP Q + + W ++ G S+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D+ WN I NG + AL ++ M + + +++S G L ++V
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 116 DQMPQ----RDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
M + R+L S NV++ Y R + A+ LF+ M ++ VSW +++ G A NG+
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 172 AARRIFDRM-----LEKNEISWNGLLAAYVQNGRIEEACMLF-----ESKANWEVVSWNS 221
A +F M L EI++ G+L A G ++E F E K + +
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 365
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVS-WNTMI 254
++ + ++ A MP++ V W T++
Sbjct: 366 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 94 SYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRD 153
S N ++ Y G+++ A+ +FD+M ++ VSW +I G N A LF+ M +
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 154 -----VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS-----WNGLLAAYVQNGRIEE 203
+++ +L + G F RM E+ +I + ++ + G++++
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 204 ACMLFES-KANWEVVSWNSLMGG 225
A +S VV W +L+G
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGA 401
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/609 (40%), Positives = 348/609 (57%), Gaps = 59/609 (9%)
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK------RLGD---AKWIFDRM 242
L A V++ E C L K VV S GF+ + RLG A+ +FD M
Sbjct: 37 LIAAVKSCVSIELCRLLHCK----VVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 243 PVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV------FTWTAMVSGYVQNGKVDE 296
P RD VSWN++I+GY+ YL + + + +V T+ +M+S V G +E
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 297 ARMI------FDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGY 350
R I F + E V NA I Y +T + + +LFE ++ KN+ SWNTMI
Sbjct: 153 GRCIHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI--- 207
Query: 351 AQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFT 410
+ H +N G +E L F +R G +++ F
Sbjct: 208 -----VIHLQN-----------------------GLAEKGLAYFNMSRRVGHEPDQATFL 239
Query: 411 SVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDK 470
+VL +C ++ + L + +HG ++ GF + ALL +Y K G +E++ F EI
Sbjct: 240 AVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSP 299
Query: 471 DVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYF 530
D ++W M+A YA HGFG+DA+ FE M GI PD +T +L+ACSH+GLVE+G YF
Sbjct: 300 DSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYF 359
Query: 531 YSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGK 590
+M++ Y + P HY+CMVDLLGR+G L +A L+K MP EP + WGALLGACR+Y
Sbjct: 360 ETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 419
Query: 591 TELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLE 650
T+L KAAE +FE+EP + YV+LSN+Y+ASG W D S++R M+ +G+ + +G S++E
Sbjct: 420 TQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Query: 651 VQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQD-GFVYSTKLVLHDVGEEEKEHMLRY 709
NK+H F VGD HPE ++I L+E+ K+K + G+ T+ VLHDVGE+ KE M+
Sbjct: 480 HGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQ 539
Query: 710 HSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSG 769
HSEK+A+A+G+L + PI + KNLR+C DCH K IS I R II+RD+ RFHHF
Sbjct: 540 HSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLD 599
Query: 770 GSCSCGDYW 778
GSCSC DYW
Sbjct: 600 GSCSCSDYW 608
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 194/466 (41%), Gaps = 97/466 (20%)
Query: 129 MISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML------E 182
++ Y+R A LF+ MP+RD+VSWN+++SGY+ GY + RM+
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 183 KNEISWNGLLAAYVQNGRIEEA-C---MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWI 238
NE+++ +++A V G EE C ++ + EV N+ + + K L + +
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 239 FDRMPVRDEVSWNTMITGYAQNN-------YLAEAQRLFEEAPVKDVFTWTAMVSGYVQN 291
F+ + +++ VSWNTMI + QN Y ++R+ E D T+ A++
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP---DQATFLAVLRSCEDM 248
Query: 292 GKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYA 351
G V A+ I + M G+ K + A ++ Y+
Sbjct: 249 GVVRLAQGIHGLI----------MFGGFSGNKCITTA-----------------LLDLYS 281
Query: 352 QSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTS 411
+ G + + +F + D ++W A++A YA G+ D+++ F M YG + FT
Sbjct: 282 KLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTH 341
Query: 412 VLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEI---- 467
+L+ C++ G VEE H FE +
Sbjct: 342 LLNACSH-----------------------------------SGLVEEGKHYFETMSKRY 366
Query: 468 -VDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
+D + ++ M+ R G +DA L + M ++P +L AC + G
Sbjct: 367 RIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP---MEPSSGVWGALLGACRVYKDTQLG 423
Query: 527 TEYFYSMNRDYGVIP-NSKHYTCMVDLLGRAGRLDEA---QNLMKN 568
T+ + R + + P + ++Y + ++ +G +A +NLMK
Sbjct: 424 TK---AAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQ 466
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 41/278 (14%)
Query: 392 RLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVK-VGFEAGCFVGNALLVM 450
R F+ + L+ + +S+++ + S+EL + LH ++VK V + G F+G+ L+
Sbjct: 18 RRFLSQSSFVHSLD-ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHG-FIGDQLVGC 75
Query: 451 YCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESM--KTVGIKPDDI 508
Y + G A F+E+ ++D++SWN++I+GY+ G+ + M VG +P+++
Sbjct: 76 YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEV 135
Query: 509 TMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKN 568
T + ++SAC + G E+G + + +GV+ K ++ G+ G L + L ++
Sbjct: 136 TFLSMISACVYGGSKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194
Query: 569 MPF----------------------------------EPDAATWGALLGACRLYGKTELA 594
+ EPD AT+ A+L +C G LA
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 595 EKAAEVI-FEMEPENAGMYVLLSNLYAASGRWGDVSKV 631
+ +I F N + L +LY+ GR D S V
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 145/342 (42%), Gaps = 30/342 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDL---- 123
+ ++R G A +F+ MP R VS+N++ISGY G L +V +M ++
Sbjct: 73 VGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRP 132
Query: 124 --VSWNVMISGYVRNKSLSAARNLFEMMPK----RDVVSWNTMLSGYAQNGYADAARRIF 177
V++ MIS V S R + ++ K +V N ++ Y + G ++ ++F
Sbjct: 133 NEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLF 192
Query: 178 DRMLEKNEISWNGLLAAYVQNGRIEEACMLFE---------SKANWEVVSWNSLMGGFVK 228
+ + KN +SWN ++ ++QNG E+ F +A + V + G V+
Sbjct: 193 EDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGY 288
+ +F ++ ++ Y++ L ++ +F E D WTAM++ Y
Sbjct: 253 LAQGIHGLIMFGGFSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 289 VQNGKVDEARMIFDAMPE----KNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-----N 339
+G +A F+ M + V++ ++ + ++ + FE M+ +
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 340 VASWNTMITGYAQSGEITHARNLFDRMPQHDCIS-WAAIIAG 380
+ ++ M+ +SG + A L MP W A++
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMP------RRSSVSYNAMISGYLLNGQLDPARQ 113
D+ WN I+ + G V + M R + V++ +MIS + G + R
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 114 V------FDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQN 167
+ F + + +V N I+ Y + L+++ LFE + +++VSWNTM+ + QN
Sbjct: 156 IHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 168 GYADAARRIFDRML----EKNEISWNGLLAAYVQNGRIEEA-----CMLFESKANWEVVS 218
G A+ F+ E ++ ++ +L + G + A ++F + + ++
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 219 WNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFE----EAP 274
+L+ + K RL D+ +F + D ++W M+ YA + + +A + FE
Sbjct: 274 -TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGI 332
Query: 275 VKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
D T+T +++ +G V+E + F+ M ++
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/578 (39%), Positives = 346/578 (59%), Gaps = 27/578 (4%)
Query: 227 VKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAE--AQRLF-----EEAPVKDVF 279
+ + L A IF++MP R+ SWNT+I G+++++ A LF +E + F
Sbjct: 70 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF 129
Query: 280 TWTAMVSGYVQNGKVDEARMIF----------DAMPEKNTVSWNAMIAGYVQTKRMDMAR 329
T+ +++ + GK+ E + I D N V M G+++ R+ +
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM-CGFMKDARVLFYK 188
Query: 330 ELFE----AMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAG 380
+ E MT + + WN MI GY + G+ AR LFD+M Q +SW +I+G
Sbjct: 189 NIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISG 248
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAG 440
Y+ +G+ +D++ +F EMK+ R N SVL + L SLELG+ LH G
Sbjct: 249 YSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRID 308
Query: 441 CFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKT 500
+G+AL+ MY KCG +E+A H FE + ++VI+W+ MI G+A HG DA+ F M+
Sbjct: 309 DVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Query: 501 VGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLD 560
G++P D+ + +L+ACSH GLVE+G YF M G+ P +HY CMVDLLGR+G LD
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 561 EAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYA 620
EA+ + NMP +PD W ALLGACR+ G E+ ++ A ++ +M P ++G YV LSN+YA
Sbjct: 429 EAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Query: 621 ASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEF 680
+ G W +VS++RL+M+++ ++K G S +++ +H F V D HP+ I + L E+
Sbjct: 489 SQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISD 548
Query: 681 KLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCED 740
KL+ G+ T VL ++ EE+KE++L YHSEK+A A+G++S G+PIR++KNLR+CED
Sbjct: 549 KLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICED 608
Query: 741 CHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
CH++IK ISK+ R I +RD RFHHF GSCSC DYW
Sbjct: 609 CHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 199/455 (43%), Gaps = 103/455 (22%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISGYVR---NKSLSAARNLFEMMPKRDV----VSWNTM 160
LD A ++F+QMPQR+ SWN +I G+ +K+L A +EMM V ++ ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 161 LSGYAQNGYADAARRIFDRMLE----KNEISWNGLLAAYVQNGRIEEACMLF-------- 208
L A+ G ++I L+ +E + L+ YV G +++A +LF
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 209 ------ESKANWEVVSWNSLMGGFVKQKRLGD---AKWIFDRMPVRDEVSWNTMITGYAQ 259
K + E+V WN ++ G++ RLGD A+ +FD+M R VSWNTMI+GY+
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYM---RLGDCKAARMLFDKMRQRSVVSWNTMISGYSL 251
Query: 260 NNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEARMIF----DAMPEKNTVS 311
N + +A +F E D+ T +++ + G ++ + D+ + V
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 312 WNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDC 371
+A+I Y + ++ A +FE + +NV +W+ MI G+A G
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHG----------------- 354
Query: 372 ISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQ 431
Q+G D++ F +M++ G R + + ++L+ C++ +E G++ Q
Sbjct: 355 -----------QAG---DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 432 LVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDA 491
+V V + ++ + + M+ R G +A
Sbjct: 401 MVSV------------------------------DGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 492 LMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
E + + IKPDD+ +L AC G VE G
Sbjct: 431 E---EFILNMPIKPDDVIWKALLGACRMQGNVEMG 462
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 145/314 (46%), Gaps = 25/314 (7%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM- 180
++V WNVMI GY+R AAR LF+ M +R VVSWNTM+SGY+ NG+ A +F M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 181 ---LEKNEISWNGLLAAYVQNGRIE--EACMLFESKANWEV--VSWNSLMGGFVKQKRLG 233
+ N ++ +L A + G +E E L+ + + V ++L+ + K +
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF---EEAPVK--DVFTWTAMVSGY 288
A +F+R+P + ++W+ MI G+A + +A F +A V+ DV + +++
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV-AYINLLTAC 385
Query: 289 VQNGKVDEARMIFDAMP-----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCK-NVAS 342
G V+E R F M E + M+ ++ +D A E M K +
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445
Query: 343 WNTMITGYAQSGEITHAR---NLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKR 399
W ++ G + + N+ M HD ++ A+ YA G + + + MK
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 400 YGERLNRSPFTSVL 413
+ + + P S++
Sbjct: 506 --KDIRKDPGCSLI 517
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 165/395 (41%), Gaps = 76/395 (19%)
Query: 69 TTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGY------------------LLNGQLDP 110
T+ + + D A +FN MP+R+ S+N +I G+ + + ++P
Sbjct: 67 TSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 111 ARQVF------------------------------DQMPQRDLVSWNVMISGYVRNKSLS 140
R F D+ +LV VM G++++ +
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM-CGFMKDARVL 185
Query: 141 AARNLFE-----MMPKR----DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGL 191
+N+ E M +R ++V WN M+ GY + G AAR +FD+M +++ +SWN +
Sbjct: 186 FYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 192 LAAYVQNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWIF----DRMP 243
++ Y NG ++A +F ++ V+ S++ + L +W+ D
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 244 VRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
D+V + +I Y++ + +A +FE P ++V TW+AM++G+ +G+ +A F
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCK 365
Query: 304 MPEKNT----VSWNAMIAGYVQTKRMDMARELFEAMTCKN-----VASWNTMITGYAQSG 354
M + V++ ++ ++ R F M + + + M+ +SG
Sbjct: 366 MRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSG 425
Query: 355 EITHARNLFDRMP-QHDCISWAAIIAGYAQSGYSE 388
+ A MP + D + W A++ G E
Sbjct: 426 LLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 58 DWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQ 117
D +I WNV I +MR G C +A +F+ M +RS VS+N MISGY LNG A +VF +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 118 MPQRDLVSWNVMISGYVRNKSLSAARNLFEMMP--------KRDVVSWNTMLSGYAQNGY 169
M + D+ V + + S + L E + + D V + ++ Y++ G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 170 ADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLM-- 223
+ A +F+R+ +N I+W+ ++ + +G+ +A C + ++ V++ +L+
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 224 ---GGFVKQKRLGDAKWI-FDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK-DV 278
GG V++ R ++ + D + R E + M+ ++ L EA+ P+K D
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIE-HYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 279 FTWTAMVSGYVQNGKVDE----ARMIFDAMP 305
W A++ G V+ A ++ D +P
Sbjct: 444 VIWKALLGACRMQGNVEMGKRVANILMDMVP 474
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/760 (33%), Positives = 409/760 (53%), Gaps = 61/760 (8%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNG------------- 106
D+ N+ + +++ G AL++F+ MP R++VS+ + GY
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 107 QLDPA-----RQVFDQMPQRDLVSW---NVMISGYVRNKSLSAARNLFEMMPKRDVVSWN 158
+L+P ++F + + ++ W ++ GY N + AA
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA---------------- 186
Query: 159 TMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEA-----CM----LFE 209
+++ Y+ G D+AR +F+ +L K+ + W G+++ YV+NG E++ CM
Sbjct: 187 -LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 210 SKANWEVVSWNSL-MGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR 268
+ ++ S+ +G F K G I V D ++ Y Q +++A +
Sbjct: 246 NNYTFDTALKASIGLGAFDFAK--GVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 269 LFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQTKR 324
+F E P DV W+ M++ + QNG +EA +F M E N + ++++ G K
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 325 MDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA 379
+ +L + K ++ N +I YA+ ++ A LF + + +SW +I
Sbjct: 364 SGLGEQL-HGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 380 GYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEA 439
GY G + +F E R + F+S L CA+LAS++LG Q+HG +K
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMK 499
V N+L+ MY KCG ++ A F E+ DV SWN +I+GY+ HG G+ AL + + MK
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 500 TVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRL 559
KP+ +T +G+LS CS+ GL+++G E F SM RD+G+ P +HYTCMV LLGR+G+L
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 560 DEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLY 619
D+A L++ +P+EP W A+L A E A ++AE I ++ P++ YVL+SN+Y
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 620 AASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELE 679
A + +W +V+ +R M++ GVKK G SW+E Q VH FSVG + HP+ I LE L
Sbjct: 663 AGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLN 722
Query: 680 FKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP-IRVMKNLRVC 738
K + G+V VL D+ +EEK+ L HSE+LA+AYG++ +P+ R I +MKNLR+C
Sbjct: 723 MKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRIC 782
Query: 739 EDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
DCH+A+K IS IV R +++RD NRFHHF G CSCGD+W
Sbjct: 783 SDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 104/268 (38%), Gaps = 49/268 (18%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D DI N I + + D+A+ +F + ++ VS+N +I GY G+ A
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 114 VFDQMPQ---------------------------------------RDLVSWNVMISGYV 134
+F + + + + N +I Y
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 135 RNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK----NEISWNG 190
+ + A+++F M DV SWN ++SGY+ +G A RI D M ++ N +++ G
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 191 LLAAYVQNGRIEEACMLFESKANWEVVS-----WNSLMGGFVKQKRLGDAKWIFDRMPVR 245
+L+ G I++ FES + + ++ + +L A + + +P
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE 615
Query: 246 DEVS-WNTMITGYAQNNYLAEAQRLFEE 272
V W M++ N A+R EE
Sbjct: 616 PSVMIWRAMLSASMNQNNEEFARRSAEE 643
Score = 36.6 bits (83), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 404 LNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHA 463
L+ + ++L C K +H ++K G F N LL Y K G ++A +
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 464 FEEIVDKDVISWNTMIAGYA 483
F+E+ +++ +S+ T+ GYA
Sbjct: 107 FDEMPERNNVSFVTLAQGYA 126
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 334/541 (61%), Gaps = 8/541 (1%)
Query: 246 DEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP 305
D + ++++ Y+ + L +A +LF+E P + V TWTA+ SGY +G+ EA +F M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 306 E----KNTVSWNAMIAGYVQTKRMD----MARELFEAMTCKNVASWNTMITGYAQSGEIT 357
E ++ +++ V +D + + + E KN T++ YA+ G++
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 358 HARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCA 417
AR++FD M + D ++W+ +I GYA + + ++ + LF++M + + ++ LS+CA
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 418 NLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNT 477
+L +L+LG+ + + F F+ NAL+ MY KCG++ + F+E+ +KD++ N
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 478 MIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDY 537
I+G A++G K + +F + +GI PD T +G+L C H GL++ G +F +++ Y
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 538 GVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKA 597
+ +HY CMVDL GRAG LD+A L+ +MP P+A WGALL CRL T+LAE
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 598 AEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHT 657
+ + +EP NAG YV LSN+Y+ GRW + ++VR M +G+KK+ GYSW+E++ KVH
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHE 564
Query: 658 FSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVA 717
F D HP D+IYA LE+L +++ GFV +T+ V DV EEEKE +L YHSEKLAVA
Sbjct: 565 FLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVA 624
Query: 718 YGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDY 777
G++S G+ IRV+KNLRVC DCH +K ISKI R I++RDNNRFH F+ GSCSC DY
Sbjct: 625 LGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDY 684
Query: 778 W 778
W
Sbjct: 685 W 685
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
LF + + ++I G+ + ++L LF+ ++++G L+ F VL C +S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
+LG LH +VK GF +LL +Y G + +A+ F+EI D+ V++W + +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
Y G ++A+ LF+ M +G+KPD +V +LSAC H G ++ G E+ + +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG-EWIVKYMEEMEMQK 245
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
NS T +V+L + G++++A+++ +M E D TW ++ Y ++ E+
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG---YASNSFPKEGIELF 301
Query: 602 FEMEPEN 608
+M EN
Sbjct: 302 LQMLQEN 308
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 84/376 (22%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ ++ + +G + A +F+ +P RS V++ A+ SGY +G+ A +F +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 120 QR--------------------DLVS--WNV-----------------MISGYVRNKSLS 140
+ DL S W V +++ Y + +
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 141 AARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKN----EISWNGLLAAYV 196
AR++F+ M ++D+V+W+TM+ GYA N + +F +ML++N + S G L++
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 197 QNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMP-VRDEVSWNTMIT 255
G ++ W + + DR + + N +I
Sbjct: 325 SLGALD--------LGEWGIS--------------------LIDRHEFLTNLFMANALID 356
Query: 256 GYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVS---- 311
YA+ +A +F+E KD+ A +SG +NG V + +F EK +S
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF-GQTEKLGISPDGS 415
Query: 312 -WNAMIAGYVQTKRMDMARELFEAMTC-----KNVASWNTMITGYAQSGEITHARNLFDR 365
+ ++ G V + F A++C + V + M+ + ++G + A L
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 366 MPQH-DCISWAAIIAG 380
MP + I W A+++G
Sbjct: 476 MPMRPNAIVWGALLSG 491
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/695 (35%), Positives = 370/695 (53%), Gaps = 44/695 (6%)
Query: 100 SGYLLNGQLDPARQVFDQMPQR--DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSW 157
S YL G+ A + R D N +I+ YV+ + AR LF++MP+R+VVSW
Sbjct: 44 SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSW 103
Query: 158 NTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV-----QNGRIEEACMLFESKA 212
M+ GY +G+ ++F M E N +A V +GRIEE
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG-------- 155
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE 272
G F+K + E NT++ Y+ + EA R+ ++
Sbjct: 156 -------KQFHGCFLKYGL------------ISHEFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM-----IAGYVQTKRMDM 327
P D+ +++ +SGY++ G E + ++ V WN + + + + +++
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFSNLRDLNL 255
Query: 328 ARELFEAMT----CKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQ 383
A ++ M V + +I Y + G++ +A+ +FD + I+ Y Q
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ 315
Query: 384 SGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFV 443
E++L LF +M N F +L++ A L+ L+ G LHG ++K G+ V
Sbjct: 316 DKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMV 375
Query: 444 GNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGI 503
GNAL+ MY K GS+E+A AF + +D+++WNTMI+G + HG G++AL F+ M G
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Query: 504 KPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQ 563
P+ IT +G+L ACSH G VE+G YF + + + V P+ +HYTC+V LL +AG +A+
Sbjct: 436 IPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 564 NLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASG 623
+ M+ P E D W LL AC + L +K AE E P ++G+YVLLSN++A S
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSR 555
Query: 624 RWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLK 683
W V+KVR M +RGVKK G SW+ ++N+ H F D HPE IYA ++E+ K+K
Sbjct: 556 EWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Query: 684 QDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHN 743
G+ HDV EE++E L YHSEKLAVAYG++ P P+ V KN+R+C+DCH+
Sbjct: 616 PLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHS 675
Query: 744 AIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
AIK ISKI R I++RD+NRFHHF G CSC DYW
Sbjct: 676 AIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 27/246 (10%)
Query: 20 TQSINRLQSPANTNPYPSKKTLKRHLN--SKSRNKPKPAGDWD--IRQWNVAITTHMRNG 75
T + N + + Y K+ + LN SK K P ++ I ++A + ++ G
Sbjct: 298 THAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG 357
Query: 76 CCDSALH--VFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGY 133
LH V S R + NA+++ Y +G ++ AR+ F M RD+V+WN MISG
Sbjct: 358 ---DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414
Query: 134 VRNKSLSAARNLFEMM------PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEIS 187
+ A F+ M P R +++ +L + G+ + F+++++K ++
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNR--ITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQ 472
Query: 188 -----WNGLLAAYVQNGRIEEA-CMLFESKANWEVVSWNSLMGG-FVKQK-RLGD--AKW 237
+ ++ + G ++A + + W+VV+W +L+ +V++ RLG A++
Sbjct: 473 PDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEY 532
Query: 238 IFDRMP 243
++ P
Sbjct: 533 AIEKYP 538
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/613 (37%), Positives = 359/613 (58%), Gaps = 53/613 (8%)
Query: 217 VSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQR----LFEE 272
+S N L+ K+ +L A + + + ++ +I + L++A R + +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 273 APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAM-----IAGY-------- 319
+D F T ++ Y G VD AR +FD ++ WNA+ +AG+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 320 -------VQTKRMDM-------------------ARELFEAMTCKNVAS----WNTMITG 349
V++ R +E+ +T + +S T++
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 350 YAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSP- 408
YA+ G + +A +F MP + +SW+A+IA YA++G + ++LR F EM R E + SP
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR--ETKDSSPN 284
Query: 409 ---FTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFE 465
SVL CA+LA+LE GK +HG +++ G ++ V +AL+ MY +CG +E F+
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 466 EIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEK 525
+ D+DV+SWN++I+ Y HG+GK A+ +FE M G P +T V +L ACSH GLVE+
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 526 GTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGAC 585
G F +M RD+G+ P +HY CMVDLLGRA RLDEA ++++M EP WG+LLG+C
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 586 RLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTG 645
R++G ELAE+A+ +F +EP+NAG YVLL+++YA + W +V +V+ + RG++K+ G
Sbjct: 465 RIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524
Query: 646 YSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEH 705
W+EV+ K+++F D +P ++I+A+L +L +K+ G++ TK VL+++ EEKE
Sbjct: 525 RCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKER 584
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
++ HSEKLA+A+G+++ G PIR+ KNLR+CEDCH K ISK + + I++RD NRFH
Sbjct: 585 IVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFH 644
Query: 766 HFSGGSCSCGDYW 778
F G CSCGDYW
Sbjct: 645 RFKNGVCSCGDYW 657
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 151/388 (38%), Gaps = 74/388 (19%)
Query: 91 SSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAA----RNLF 146
+ +S N +I G+L A +V Q ++ ++I SLS A R++
Sbjct: 45 AKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHIL 104
Query: 147 EMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEE--- 203
+ +D ++ Y+ G D AR++FD+ ++ WN L A G EE
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 204 ----------------------ACMLFESKANW------------------EVVSWNSLM 223
AC+ E N V +L+
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 224 GGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEA--PVKDVF-T 280
+ + + A ++F MPVR+ VSW+ MI YA+N EA R F E KD
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 281 WTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV 340
MVS + A + +I GY+ + +D + A
Sbjct: 285 SVTMVS-------------VLQACASLAALEQGKLIHGYILRRGLDSILPVISA------ 325
Query: 341 ASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRY 400
++T Y + G++ + +FDRM D +SW ++I+ Y GY + ++++F EM
Sbjct: 326 -----LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 401 GERLNRSPFTSVLSTCANLASLELGKQL 428
G F SVL C++ +E GK+L
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 32/271 (11%)
Query: 127 NVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEK--- 183
++ Y R + A +F MP R+VVSW+ M++ YA+NG A A R F M+ +
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 184 ---NEISWNGLLAAYVQNGRIEEACM----LFESKANWEVVSWNSLMGGFVKQKRLGDAK 236
N ++ +L A +E+ + + + + ++L+ + + +L +
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340
Query: 237 WIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEE--------APVKDVFTWTAMVSGY 288
+FDRM RD VSWN++I+ Y + Y +A ++FEE PV T+ +++
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV----TFVSVLGAC 396
Query: 289 VQNGKVDEARMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVAS 342
G V+E + +F+ M + + + M+ + R+D A ++ + M T
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 343 WNTMITGYAQSGEITHA----RNLFDRMPQH 369
W +++ G + A R LF P++
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 39/295 (13%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQM--PQRDLVS 125
+ + R GC D A +VF MP R+ VS++AMI+ Y NG+ A + F +M +D
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 126 WNV-MISGYVRNKSLSAA------------RNLFEMMPKRDVVSWNTMLSGYAQNGYADA 172
+V M+S SL+A R L ++P V+S +++ Y + G +
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP---VIS--ALVTMYGRCGKLEV 338
Query: 173 ARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFE----SKANWEVVSWNSLMGGFVK 228
+R+FDRM +++ +SWN L+++Y +G ++A +FE + A+ V++ S++G
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 229 QKRLGDAKWIFDRMPVRDEVSWNTMITGYA-QNNYLAEAQRLFEEAP-VKDVFT------ 280
+ + + K +F+ M RD I YA + L A RL E A V+D+ T
Sbjct: 399 EGLVEEGKRLFETM-WRDH-GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 281 WTAMVSGYVQNGKVDEA----RMIFDAMPEKNTVSWNAMIAGYVQTKRMDMAREL 331
W +++ +G V+ A R +F A+ KN ++ + Y + + D + +
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLF-ALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/592 (37%), Positives = 335/592 (56%), Gaps = 39/592 (6%)
Query: 194 AYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTM 253
AY +G+I + LF + ++ + + + L D ++ + E++ N
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLSSEINPNEF 131
Query: 254 ITGYAQNNYLAEAQRLFEEAPVK-----DVFTWTAMVSGYVQNGKVDEARMIFDAMPEKN 308
+ ++ +L +K D + T +V Y + G V A+ +FD MPE++
Sbjct: 132 TFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 309 TVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQ 368
VS A MIT YA+ G + AR LFD M +
Sbjct: 192 LVSSTA-------------------------------MITCYAKQGNVEAARALFDSMCE 220
Query: 369 HDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGE-RLNRSPFTSVLSTCANLASLELGKQ 427
D +SW +I GYAQ G+ D+L LF ++ G+ + + + LS C+ + +LE G+
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 428 LHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGF 487
+H + V L+ MY KCGS+EEA F + KD+++WN MIAGYA HG+
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 488 GKDALMLFESMKTV-GIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHY 546
+DAL LF M+ + G++P DIT +G L AC+H GLV +G F SM ++YG+ P +HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 547 TCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEMEP 606
C+V LLGRAG+L A +KNM + D+ W ++LG+C+L+G L ++ AE + +
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 607 ENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHP 666
+N+G+YVLLSN+YA+ G + V+KVR M+++G+ K G S +E++NKVH F GD H
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 667 EKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAG 726
+ IY L ++ ++K G+V +T VL D+ E EKE L+ HSE+LA+AYG++S G
Sbjct: 521 KSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPG 580
Query: 727 RPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
P+++ KNLRVC DCH K ISKI GR I++RD NRFHHF+ GSCSCGD+W
Sbjct: 581 SPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 18/228 (7%)
Query: 96 NAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVV 155
++ Y G + A++VFD+MP+R LVS MI+ Y + ++ AAR LF+ M +RD+V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 156 SWNTMLSGYAQNGYADAARRIFDRML-----EKNEISWNGLLAAYVQNGRIEEA----CM 206
SWN M+ GYAQ+G+ + A +F ++L + +EI+ L+A Q G +E
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 207 LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEA 266
+ S+ V L+ + K L +A +F+ P +D V+WN MI GYA + Y +A
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 267 QRLFEE-------APVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK 307
RLF E P F T + G V+E IF++M ++
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHA--GLVNEGIRIFESMGQE 390
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 151/323 (46%), Gaps = 28/323 (8%)
Query: 68 ITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWN 127
+ + + G SA VF+ MP RS VS AMI+ Y G ++ AR +FD M +RD+VSWN
Sbjct: 168 VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWN 227
Query: 128 VMISGYVRNKSLSAARNLFEMM-----PKRDVVSWNTMLSGYAQNGYADAARRIFDRMLE 182
VMI GY ++ + A LF+ + PK D ++ LS +Q G + R I ++
Sbjct: 228 VMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI-HVFVK 286
Query: 183 KNEISWN-----GLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKW 237
+ I N GL+ Y + G +EEA ++F ++V+WN+++ G+ DA
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 238 IFDRMP-----VRDEVSWNTMITGYAQNNYLAEAQRLFE----EAPVK-DVFTWTAMVSG 287
+F+ M ++++ + A + E R+FE E +K + + +VS
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 288 YVQNGKVDEARMIFDAMP-EKNTVSWNAMIAGYVQTKRMDMARELFE---AMTCKNVASW 343
+ G++ A M + ++V W++++ + +E+ E + KN +
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
Query: 344 NTMITGYAQSGE---ITHARNLF 363
+ YA G+ + RNL
Sbjct: 467 VLLSNIYASVGDYEGVAKVRNLM 489
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 163/413 (39%), Gaps = 88/413 (21%)
Query: 95 YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSLSAARNLFEMMPKR-- 152
+ A I+ +NG D A ++ Q+ ++ S +++ S + + + + K
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGL 157
Query: 153 --DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFES 210
D ++ YA+ G +A+++FDRM E++ +S ++ Y + G +E
Sbjct: 158 GIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA------- 210
Query: 211 KANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF 270
A+ +FD M RD VSWN MI GYAQ+ + +A LF
Sbjct: 211 ------------------------ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 271 -----EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEK----NTVSWNAMIAGYVQ 321
E P D T A +S Q G ++ R I + N +I Y +
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 322 TKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGY 381
++ A +F K++ +WN MI GY
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGY------------------------------- 335
Query: 382 AQSGYSEDSLRLFIEMKRY-GERLNRSPFTSVLSTCANLASLELGKQLHGQL-----VKV 435
A GYS+D+LRLF EM+ G + F L CA+ + G ++ + +K
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 436 GFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWNTMIAGYARHG 486
E GC V + + G ++ AY + + +D D + W++++ HG
Sbjct: 396 KIEHYGCLVS-----LLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/537 (42%), Positives = 341/537 (63%), Gaps = 11/537 (2%)
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTV 310
N +I Y+++ +++R FE++P K TW++++S + QN + M N
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 311 SWNAMIAGYVQT----KRMDMARELFEAMTCK-----NVASWNTMITGYAQSGEITHARN 361
+ ++ ++ R D+ R + ++ K +V ++++ YA+ GEI +AR
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSV-HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARK 172
Query: 362 LFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLAS 421
+FD MPQ + ++W+ ++ GYAQ G +E++L LF E +N F+SV+S CAN
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 422 LELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAG 481
LELG+Q+HG +K F++ FVG++L+ +Y KCG E AY F E+ K++ WN M+
Sbjct: 233 LELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKA 292
Query: 482 YARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIP 541
YA+H + + LF+ MK G+KP+ IT + +L+ACSH GLV++G YF M ++ + P
Sbjct: 293 YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEP 351
Query: 542 NSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAEVI 601
KHY +VD+LGRAGRL EA ++ NMP +P + WGALL +C ++ TELA AA+ +
Sbjct: 352 TDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKV 411
Query: 602 FEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQNKVHTFSVG 661
FE+ P ++GM++ LSN YAA GR+ D +K R +RDRG KK TG SW+E +NKVHTF+ G
Sbjct: 412 FELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAG 471
Query: 662 DTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEKLAVAYGIL 721
+ H + IY L EL ++++ G++ T VL +V +EK +RYHSE+LA+A+G++
Sbjct: 472 ERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLI 531
Query: 722 SIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+ PA RPIRVMKNLRVC DCHNAIK +S R+II+RDNNRFH F G CSC DYW
Sbjct: 532 TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 164/375 (43%), Gaps = 60/375 (16%)
Query: 153 DVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKA 212
DV ++++ YA+ G AR++FD M ++N ++W+G++ Y Q G EEA LF+
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA- 208
Query: 213 NWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLF-- 270
+F+ + V D S++++I+ A + L +++
Sbjct: 209 -------------------------LFENLAVND-YSFSSVISVCANSTLLELGRQIHGL 242
Query: 271 --EEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMPEKNTVSWNAMIAGYVQTKRMDMA 328
+ + F +++VS Y + G + A +F+ +P KN WNAM+ Y Q
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302
Query: 329 RELFEAMTCK----NVASWNTMITGYAQSGEITHARNLFDRMPQHDC----ISWAAIIAG 380
ELF+ M N ++ ++ + +G + R FD+M + +A+++
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362
Query: 381 YAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVG-FEA 439
++G +++L + M S + ++L++C + EL ++ ++G +
Sbjct: 363 LGRAGRLQEALEVITNMPI---DPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSS 419
Query: 440 GCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDV-----ISW-------NTMIAGYARHGF 487
G + +L Y G E+A A + + D+ +SW +T AG RH
Sbjct: 420 GMHI--SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEK 477
Query: 488 GKDALMLFESMKTVG 502
K+ ++E + +G
Sbjct: 478 SKE---IYEKLAELG 489
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 20/302 (6%)
Query: 122 DLVSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML 181
D+ + ++ Y + + AR +F+ MP+R+VV+W+ M+ GYAQ G + A +F L
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 182 EK----NEISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLG 233
+ N+ S++ +++ + +E + +S + +SL+ + K
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 234 DAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVK----DVFTWTAMVSGYV 289
A +F+ +PV++ WN M+ YAQ+++ + LF+ + + T+ +++
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 290 QNGKVDEARMIFDAMPEKNTVSWNAMIAGYV----QTKRMDMARELFEAMTCKNVAS-WN 344
G VDE R FD M E + A V + R+ A E+ M S W
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 345 TMITGYAQSGEITHARNLFDRMPQHDCISWAAIIA---GYAQSGYSEDSLRLFIEMKRYG 401
++T A D++ + +S I+ YA G ED+ + ++ G
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449
Query: 402 ER 403
E+
Sbjct: 450 EK 451
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 62/344 (18%)
Query: 54 KPAGDWDIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQ 113
K D D+ + + + + G A +F+ MP+R+ V+++ M+ GY G+ + A
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 114 VFDQMPQRDLV----SWNVMISGYVRNKSLSAARNL------------------------ 145
+F + +L S++ +IS + L R +
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYS 263
Query: 146 -----------FEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNG 190
F +P +++ WN ML YAQ+ + +F RM ++ N I++
Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLN 323
Query: 191 LLAAYVQNGRIEEACMLF----ESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR- 245
+L A G ++E F ES+ + SL+ + RL +A + MP+
Sbjct: 324 VLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDP 383
Query: 246 DEVSWNTMITGYA--QNNYLA--EAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEA---- 297
E W ++T +N LA A ++FE PV ++ + Y +G+ ++A
Sbjct: 384 TESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH-ISLSNAYAADGRFEDAAKAR 442
Query: 298 RMIFDAMPEKNT-VSW----NAMIAGYVQTKRMDMARELFEAMT 336
+++ D +K T +SW N + +R + ++E++E +
Sbjct: 443 KLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLA 486
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 405 NRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAF 464
N + +L + A S G QLHG +VK G V N L+ Y K ++ AF
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 465 EEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVE 524
E+ K +W+++I+ +A++ +L + M ++PDD + +C+ +
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 525 KGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGA 584
G + ++ G + + +VD+ + G + A+ + MP + + TW +
Sbjct: 134 IGRS-VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGM--- 188
Query: 585 CRLYGKTELAE 595
+YG ++ E
Sbjct: 189 --MYGYAQMGE 197
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/605 (36%), Positives = 353/605 (58%), Gaps = 21/605 (3%)
Query: 192 LAAYVQNGRIEEACM---LFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEV 248
++ NGR++EA + + + + +++L+ + ++ L D + + M ++
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFH--GYDALLNACLDKRALRDGQRVHAHM-IKTRY 83
Query: 249 SWNT-----MITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDA 303
T ++ Y + + L +A+++ +E P K+V +WTAM+S Y Q G EA +F
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 304 M----PEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGE 355
M + N ++ ++ ++ + + +++ + N S ++++ YA++G+
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
I AR +F+ +P+ D +S AIIAGYAQ G E++L +F + G N + S+L+
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
+ LA L+ GKQ H +++ + N+L+ MY KCG++ A F+ + ++ ISW
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 476 NTMIAGYARHGFGKDALMLFESMKTVG-IKPDDITMVGILSACSHTGLVEKGTEYFYSM- 533
N M+ GY++HG G++ L LF M+ +KPD +T++ +LS CSH + + G F M
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 534 NRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTEL 593
+YG P ++HY C+VD+LGRAGR+DEA +K MP +P A G+LLGACR++ ++
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 443
Query: 594 AEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGYSWLEVQN 653
E + E+EPENAG YV+LSNLYA++GRW DV+ VR M + V K G SW++ +
Sbjct: 444 GESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQ 503
Query: 654 KVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHDVGEEEKEHMLRYHSEK 713
+H F D HP ++ + A ++E+ K+KQ G+V VL+DV EE+KE ML HSEK
Sbjct: 504 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEK 563
Query: 714 LAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFHHFSGGSCS 773
LA+ +G+++ G PIRV KNLR+C DCHN K SK+ R + LRD NRFH G CS
Sbjct: 564 LALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICS 623
Query: 774 CGDYW 778
CGDYW
Sbjct: 624 CGDYW 628
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 139/325 (42%), Gaps = 60/325 (18%)
Query: 76 CCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRD------------- 122
C + A V + MP ++ VS+ AMIS Y G A VF +M + D
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 123 -----------------LVSWNV---------MISGYVRNKSLSAARNLFEMMPKRDVVS 156
+V WN ++ Y + + AR +FE +P+RDVVS
Sbjct: 162 SCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVS 221
Query: 157 WNTMLSGYAQNGYADAARRIFDRM----LEKNEISWNGLLA-----AYVQNGRIEEACML 207
+++GYAQ G + A +F R+ + N +++ LL A + +G+ + C +
Sbjct: 222 CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK-QAHCHV 280
Query: 208 FESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQ 267
+ + V NSL+ + K L A+ +FD MP R +SWN M+ GY+++ E
Sbjct: 281 LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVL 340
Query: 268 RLF----EEAPVK-DVFTWTAMVSGYVQNGKVDEARMIFDAM------PEKNTVSWNAMI 316
LF +E VK D T A++SG D IFD M + T + ++
Sbjct: 341 ELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIV 400
Query: 317 AGYVQTKRMDMARELFEAMTCKNVA 341
+ R+D A E + M K A
Sbjct: 401 DMLGRAGRIDEAFEFIKRMPSKPTA 425
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 34/324 (10%)
Query: 103 LLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNK---------SLSAARNLFEMMPKRD 153
LLN LD Q ++ + + Y+R + L AR + + MP+++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 154 VVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQNGRIEEACMLFESKAN 213
VVSW M+S Y+Q G++ A +F M+ +++ N A V I + + + +
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMM-RSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 214 WEVVSWN---------SLMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLA 264
+V WN SL+ + K ++ +A+ IF+ +P RD VS +I GYAQ
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 265 EA----QRLFEEAPVKDVFTWTAMVS-----GYVQNGKVDEARMIFDAMPEKNTVSWNAM 315
EA RL E + T+ ++++ + +GK ++ +P V N++
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP-FYAVLQNSL 295
Query: 316 IAGYVQTKRMDMARELFEAMTCKNVASWNTMITGYAQSGEITHARNLF-----DRMPQHD 370
I Y + + AR LF+ M + SWN M+ GY++ G LF ++ + D
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 371 CISWAAIIAGYAQSGYSEDSLRLF 394
++ A+++G + + L +F
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIF 379
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 19/265 (7%)
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F P + + I+ +G +++L +EM G + + ++L+ C + +L
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 423 ELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWNTMIAGY 482
G+++H ++K + ++ LL+ Y KC +E+A +E+ +K+V+SW MI+ Y
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 483 ARHGFGKDALMLFESMKTVGIKPDDITMVGILSAC---SHTGLVEKGTEYFYSMNRDYGV 539
++ G +AL +F M KP++ T +L++C S GL ++ N D +
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 540 IPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACRLYGKTELAEKAAE 599
S ++D+ +AG++ EA+ + + +P E D + A++ Y + L E+A E
Sbjct: 189 FVGSS----LLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAG---YAQLGLDEEALE 240
Query: 600 VIFEMEPENAGM---YVLLSNLYAA 621
+ + E GM YV ++L A
Sbjct: 241 MFHRLHSE--GMSPNYVTYASLLTA 263
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRR----SSVSYNAMISGYLLNGQLDPARQVF 115
D+ I + + G + AL +F+ + + V+Y ++++ LD +Q
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
Query: 116 DQMPQRDL----VSWNVMISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYAD 171
+ +R+L V N +I Y + +LS AR LF+ MP+R +SWN ML GY+++G
Sbjct: 278 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 172 AARRIFDRMLEKNEISWNG--LLAAY--VQNGRIEEACM-LFESKANWEVVS------WN 220
+F M ++ + + LLA +GR+E+ + +F+ E + +
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYG 397
Query: 221 SLMGGFVKQKRLGDAKWIFDRMPVR 245
++ + R+ +A RMP +
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSK 422
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 326/553 (58%), Gaps = 9/553 (1%)
Query: 235 AKWIFDRMPVRDEVSWNTMITGYAQNN----YLAEAQRLFEEAPVKDVFTWTAMVSGYVQ 290
A+ +FD D WN MI G++ ++ L QR+ + + +T+ +++
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 291 NGKVDEARMIFDAMP----EKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWNTM 346
+E I + E + + N++I Y T +A LF+ + + SWN++
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 347 ITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNR 406
I GY ++G++ A LF +M + + ISW +I+GY Q+ ++++L+LF EM+ +
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 407 SPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEE 466
+ LS CA L +LE GK +H L K +G L+ MY KCG +EEA F+
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 467 IVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTGLVEKG 526
I K V +W +I+GYA HG G++A+ F M+ +GIKP+ IT +L+ACS+TGLVE+G
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 527 TEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEPDAATWGALLGACR 586
FYSM RDY + P +HY C+VDLLGRAG LDEA+ ++ MP +P+A WGALL ACR
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 587 LYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRLKMRDRGVKKVTGY 646
++ EL E+ E++ ++P + G YV +N++A +W ++ R M+++GV KV G
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 647 SWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKLVLHD-VGEEEKEH 705
S + ++ H F GD HPE ++I + + KL+++G+V + +L D V ++E+E
Sbjct: 488 STISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREA 547
Query: 706 MLRYHSEKLAVAYGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIVGRLIILRDNNRFH 765
++ HSEKLA+ YG++ G IR+MKNLRVC+DCH K ISKI R I++RD RFH
Sbjct: 548 IVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFH 607
Query: 766 HFSGGSCSCGDYW 778
HF G CSCGDYW
Sbjct: 608 HFRDGKCSCGDYW 620
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 16/304 (5%)
Query: 139 LSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRML----EKNEISWNGLLAA 194
L A+ +F+ + D WN M+ G++ + + + ++ RML N ++ LL A
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 195 YVQNGRIEEACMLFE--SKANWE--VVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSW 250
EE + +K +E V + NSL+ + A +FDR+P D+VSW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 251 NTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----E 306
N++I GY + + A LF + K+ +WT M+SGYVQ EA +F M E
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 307 KNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASWN----TMITGYAQSGEITHARNL 362
+ VS ++ Q ++ + + + + + +I YA+ GE+ A +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 363 FDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASL 422
F + + +W A+I+GYA G+ +++ F+EM++ G + N FT+VL+ C+ +
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 423 ELGK 426
E GK
Sbjct: 365 EEGK 368
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 33/265 (12%)
Query: 356 ITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLST 415
+ +A+ +FD + D W +I G++ S E SL L+ M N F S+L
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 416 CANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISW 475
C+NL++ E Q+H Q+ K+G+E + N+L+ Y G+ + A+ F+ I + D +SW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 476 NTMIAGYARHG-------------------------------FGKDALMLFESMKTVGIK 504
N++I GY + G K+AL LF M+ ++
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 505 PDDITMVGILSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQN 564
PD++++ LSAC+ G +E+G ++ +S + +S ++D+ + G ++EA
Sbjct: 245 PDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 565 LMKNMPFEPDAATWGALLGACRLYG 589
+ KN+ + W AL+ +G
Sbjct: 304 VFKNIK-KKSVQAWTALISGYAYHG 327
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 22/320 (6%)
Query: 77 CDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRN 136
C SA H + P N +S + Q+ Q+ + D+ + N +I+ Y
Sbjct: 108 CSSAPHNAYTFPSLLKACSN--LSAFEETTQIHA--QITKLGYENDVYAVNSLINSYAVT 163
Query: 137 KSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYV 196
+ A LF+ +P+ D VSWN+++ GY + G D A +F +M EKN ISW +++ YV
Sbjct: 164 GNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV 223
Query: 197 QNGRIEEACMLFESKANWEV----VSWNSLMGGFVKQKRLGDAKWI---FDRMPVR-DEV 248
Q +EA LF N +V VS + + + L KWI ++ +R D V
Sbjct: 224 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 283
Query: 249 SWNTMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP--- 305
+I YA+ + EA +F+ K V WTA++SGY +G EA F M
Sbjct: 284 LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 343
Query: 306 -EKNTVSWNAMIAGYVQTKRMDMARELFEAMT-----CKNVASWNTMITGYAQSGEITHA 359
+ N +++ A++ T ++ + +F +M + + ++ ++G + A
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 360 RNLFDRMP-QHDCISWAAII 378
+ MP + + + W A++
Sbjct: 404 KRFIQEMPLKPNAVIWGALL 423
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 172/400 (43%), Gaps = 68/400 (17%)
Query: 108 LDPARQVFDQMPQRDLVSWNVMISG--------------------------YVRNKSLSA 141
L A+ VFD + D WN+MI G Y L A
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 142 ARNL--FEMMPK-----------RDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISW 188
NL FE + DV + N++++ YA G A +FDR+ E +++SW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 189 NGLLAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR--- 245
N ++ YV+ G+++ A LF A +SW +++ G+V+ +A +F M
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 246 -DEVSWNTMITGYAQNNYLAEAQRL---FEEAPVK-DVFTWTAMVSGYVQNGKVDEARMI 300
D VS ++ AQ L + + + + ++ D ++ Y + G+++EA +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 301 FDAMPEKNTVSWNAMIAGYVQ--------TKRMDMARELFEAMTCKNVASWNTMITGYAQ 352
F + +K+ +W A+I+GY +K M+M + + NV ++ ++T +
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP----NVITFTAVLTACSY 360
Query: 353 SGEITHARNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRS 407
+G + + +F M + + + I+ ++G +++ R EM + N
Sbjct: 361 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL---KPNAV 417
Query: 408 PFTSVLSTCANLASLELGKQLHGQLVKVG-FEAGCFVGNA 446
+ ++L C ++ELG+++ L+ + + G +V A
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKA 457
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 20/295 (6%)
Query: 60 DIRQWNVAITTHMRNGCCDSALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMP 119
D+ N I ++ G A +F+ +P VS+N++I GY+ G++D A +F +M
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 120 QRDLVSWNVMISGYVRNKSLSAARNLFEMMPKRDV----VSWNTMLSGYAQNGYADAARR 175
+++ +SW MISGYV+ A LF M DV VS LS AQ G + +
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 176 IFDRMLEKNEISWNGLLAA-----YVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQK 230
I L K I + +L Y + G +EEA +F++ V +W +L+ G+
Sbjct: 269 IHS-YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 231 RLGDAKWIF---DRMPVRDEV-SWNTMITGYAQNNYLAEAQRLF----EEAPVKDVFT-W 281
+A F +M ++ V ++ ++T + + E + +F + +K +
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 282 TAMVSGYVQNGKVDEARMIFDAMPEK-NTVSWNAMIAGYVQTKRMDMARELFEAM 335
+V + G +DEA+ MP K N V W A++ K +++ E+ E +
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 442
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 333/571 (58%), Gaps = 14/571 (2%)
Query: 222 LMGGFVKQKRLGDAKWIFDRMPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAP----VKD 277
M + R+ A+ +FD M RD V+WNTMI Y + + EA +LFEE + D
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 278 VFTWTAMVSGYVQNGKVDEARMIFDAMPEKN----TVSWNAMIAGYVQTKRMDMARELFE 333
+VS + G + R I++ + E + T A++ Y MDMARE F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 334 AMTCKNVASWNTMITGYAQSGEITHARNLFDRMPQHDCISWAAIIAGYAQSGYSEDSLRL 393
M+ +N+ M++GY++ G + A+ +FD+ + D + W +I+ Y +S Y +++LR+
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 394 FIEMKRYGERLNRSPFTSVLSTCANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCK 453
F EM G + + SV+S CANL L+ K +H + G E+ + NAL+ MY K
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 454 CGSVEEAYHAFEEIVDKDVISWNTMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGI 513
CG ++ FE++ ++V+SW++MI + HG DAL LF MK ++P+++T VG+
Sbjct: 392 CGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGV 451
Query: 514 LSACSHTGLVEKGTEYFYSMNRDYGVIPNSKHYTCMVDLLGRAGRLDEAQNLMKNMPFEP 573
L CSH+GLVE+G + F SM +Y + P +HY CMVDL GRA L EA ++++MP
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Query: 574 DAATWGALLGACRLYGKTELAEKAAEVIFEMEPENAGMYVLLSNLYAASGRWGDVSKVRL 633
+ WG+L+ ACR++G+ EL + AA+ I E+EP++ G VL+SN+YA RW DV +R
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRR 571
Query: 634 KMRDRGVKKVTGYSWLEVQNKVHTFSVGDTLHPEKDRIYAYLEELEFKLKQDGFVYSTKL 693
M ++ V K G S ++ K H F +GD H + + IYA L+E+ KLK G+V
Sbjct: 572 VMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGS 631
Query: 694 VLHDVGEEEKEHMLRYHSEKLAVAYGILSIPAGRP------IRVMKNLRVCEDCHNAIKH 747
VL DV EEEK+ ++ +HSEKLA+ +G+++ IR++KNLRVCEDCH K
Sbjct: 632 VLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKL 691
Query: 748 ISKIVGRLIILRDNNRFHHFSGGSCSCGDYW 778
+SK+ R II+RD RFH + G CSC DYW
Sbjct: 692 VSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 208/453 (45%), Gaps = 43/453 (9%)
Query: 81 LHVFNSMPRRSSVS-YNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYVRNKSL 139
L F+ +P +VS +A+ G L+G + D + + Y +
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDM------YASCGRI 162
Query: 140 SAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRMLEKNEISWNGLLAAYVQ-- 197
+ ARN+F+ M RDVV+WNTM+ Y + G D A ++F+ M + N + +L V
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 198 ----NGRIEEAC--MLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVRDEVSWN 251
N R A L E+ + +L+ + + A+ F +M VR+
Sbjct: 223 GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 252 TMITGYAQNNYLAEAQRLFEEAPVKDVFTWTAMVSGYVQNGKVDEARMIFDAMP----EK 307
M++GY++ L +AQ +F++ KD+ WT M+S YV++ EA +F+ M +
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 308 NTVSWNAMIAGYVQTKRMDMARELFEAMTCKNVASW----NTMITGYAQSGEITHARNLF 363
+ VS ++I+ +D A+ + + + S N +I YA+ G + R++F
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 364 DRMPQHDCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTCANLASLE 423
++MP+ + +SW+++I + G + D+L LF MK+ N F VL C++ +E
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 424 LGKQLHGQL-----VKVGFEA-GCFVGNALLVMYCKCGSVEEAYHAFEEI-VDKDVISWN 476
GK++ + + E GC V ++ + + EA E + V +V+ W
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGCMVD-----LFGRANLLREALEVIESMPVASNVVIWG 517
Query: 477 TMIAGYARHG---FGKDALMLFESMKTVGIKPD 506
++++ HG GK F + + + ++PD
Sbjct: 518 SLMSACRIHGELELGK-----FAAKRILELEPD 545
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 171/383 (44%), Gaps = 61/383 (15%)
Query: 49 SRNKPKPAGDWDIRQWNVAITTHMRNGCCDSALHVF------NSMP-------------R 89
+RN D+ WN I + R G D A +F N MP R
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 90 RSSVSYN--------------------AMISGYLLNGQLDPARQVFDQMPQRDLVSWNVM 129
++ YN A+++ Y G +D AR+ F +M R+L M
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 130 ISGYVRNKSLSAARNLFEMMPKRDVVSWNTMLSGYAQNGYADAARRIFDRM----LEKNE 185
+SGY + L A+ +F+ K+D+V W TM+S Y ++ Y A R+F+ M ++ +
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 186 ISWNGLLAAYVQNGRIEEA----CMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDR 241
+S +++A G +++A + + E+ N+L+ + K L + +F++
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 242 MPVRDEVSWNTMITGYAQNNYLAEAQRLFEEAPVKDV----FTWTAMVSGYVQNGKVDEA 297
MP R+ VSW++MI + + ++A LF ++V T+ ++ G +G V+E
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 298 RMIFDAMPEKNTVS-----WNAMIAGYVQTKRMDMARELFEAM-TCKNVASWNTMITGYA 351
+ IF +M ++ ++ + M+ + + + A E+ E+M NV W ++++
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 352 QSGEIT----HARNLFDRMPQHD 370
GE+ A+ + + P HD
Sbjct: 525 IHGELELGKFAAKRILELEPDHD 547
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 172/372 (46%), Gaps = 28/372 (7%)
Query: 80 ALHVFNSMPRRSSVSYNAMISGYLLNGQLDPARQVFDQMPQRDLVSWNVMISGYV----R 135
A +VF+ M R V++N MI Y G +D A ++F++M +++ +++ V R
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 136 NKSLSAARNLFEMMPKRDVVSWNTMLSG----YAQNGYADAARRIFDRMLEKNEISWNGL 191
++ R ++E + + DV +L+ YA G D AR F +M +N +
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 192 LAAYVQNGRIEEACMLFESKANWEVVSWNSLMGGFVKQKRLGDAKWIFDRMPVR----DE 247
++ Y + GR+++A ++F+ ++V W +++ +V+ +A +F+ M D
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 248 VSWNTMITGYAQNNYLAEAQRLFEEAPV----KDVFTWTAMVSGYVQNGKVDEARMIFDA 303
VS ++I+ A L +A+ + V ++ A+++ Y + G +D R +F+
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 304 MPEKNTVSWNAMIAGYVQTKRMDMARELFEAMTCKNV----ASWNTMITGYAQSGEITHA 359
MP +N VSW++MI A LF M +NV ++ ++ G + SG +
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 360 RNLFDRMPQHDCIS-----WAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLS 414
+ +F M I+ + ++ + ++ ++L + M N + S++S
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS---NVVIWGSLMS 521
Query: 415 TCANLASLELGK 426
C LELGK
Sbjct: 522 ACRIHGELELGK 533
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 40/295 (13%)
Query: 358 HARNLFDRMPQH-DCISWAAIIAGYAQSGYSEDSLRLFIEMKRYGERLNRSPFTSVLSTC 416
+A N+F +P + I + + ++S ++ + ++ G RL++ F +L
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 417 ANLASLELGKQLHGQLVKVGFEAGCFVGNALLVMYCKCGSVEEAYHAFEEIVDKDVISWN 476
+ +++L G +LHG K+ FV + MY CG + A + F+E+ +DV++WN
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 477 TMIAGYARHGFGKDALMLFESMKTVGIKPDDITMVGILSACSHTG-----------LVEK 525
TMI Y R G +A LFE MK + PD++ + I+SAC TG L+E
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 526 GTEY-------FYSMNRDYGVIPNSKHY------------TCMVDLLGRAGRLDEAQNLM 566
+M G + ++ + T MV + GRLD+AQ +
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 567 KNMPFEPDAATWGALLGACRLYGKTELAEKAAEVIFEM-----EPENAGMYVLLS 616
+ D W ++ A Y +++ ++A V EM +P+ M+ ++S
Sbjct: 302 DQTE-KKDLVCWTTMISA---YVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 294,649,065
Number of Sequences: 539616
Number of extensions: 12315762
Number of successful extensions: 43126
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 28747
Number of HSP's gapped (non-prelim): 2823
length of query: 778
length of database: 191,569,459
effective HSP length: 125
effective length of query: 653
effective length of database: 124,117,459
effective search space: 81048700727
effective search space used: 81048700727
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)