BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004025
(778 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 38/256 (14%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V++ I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK--------TLYL 90
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
V E E L G +++ QI AV + + +VH ++ ++++
Sbjct: 91 VMEYASG-GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDA 148
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ F +EF N+ A+ Y EL + +K +D
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLD-------AFCGAPPYAAPELFQG-----KKYDGPEVDV 196
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSM----PSRRL 272
W LG ++Y L F G L + E LR IP + D + LL PS+R
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR- 255
Query: 273 NSSKLIENSVGDFWMT 288
+E + D WM
Sbjct: 256 ---GTLEQIMKDRWMN 268
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ + Q + V +L+N+ +++H ++ L ++ + +D K+ F + + EFDG +
Sbjct: 146 YFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--- 201
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A +K + +D W LGC++Y L G +T L
Sbjct: 202 ------LCGT---PNYIAPE--VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250
Query: 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291
+N S+P+ + P + S++ R L++ + SV + E+F
Sbjct: 251 YIRIKKNEYSVPRHINP----VASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ + Q + V +L+N+ +++H ++ L ++ + +D K+ F + + EFDG +
Sbjct: 146 YFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX--- 201
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A +K + +D W LGC++Y L G +T L
Sbjct: 202 ------LCGT---PNYIAPE--VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250
Query: 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291
+N S+P+ + P + S++ R L++ + SV + E+F
Sbjct: 251 YIRIKKNEYSVPRHINP----VASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ + Q + V +L+N+ +++H ++ L ++ + +D K+ F + + EFDG +
Sbjct: 146 YFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--- 201
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A +K + +D W LGC++Y L G +T L
Sbjct: 202 ------LCGT---PNYIAPE--VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250
Query: 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291
+N S+P+ + P + S++ R L++ + SV + E+F
Sbjct: 251 YIRIKKNEYSVPRHINP----VASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ + Q + V +L+N+ +++H ++ L ++ + +D K+ F + + EFDG +
Sbjct: 130 YFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--- 185
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A +K + +D W LGC++Y L G +T L
Sbjct: 186 ------LCGT---PNYIAPE--VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 234
Query: 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291
+N S+P+ + P + S++ R L++ + SV + E+F
Sbjct: 235 YIRIKKNEYSVPRHINP----VASALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 96/255 (37%), Gaps = 38/255 (14%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V++ I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK--------TLYL 90
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
V E E L G +++ QI AV + + +VH ++ ++++
Sbjct: 91 VMEYASG-GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDA 148
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ F +EF N+ + Y EL + +K +D
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLD-------TFCGSPPYAAPELFQG-----KKYDGPEVDV 196
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSM----PSRRL 272
W LG ++Y L F G L + E LR IP + D + LL PS+R
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR- 255
Query: 273 NSSKLIENSVGDFWM 287
+E + D WM
Sbjct: 256 ---GTLEQIMKDRWM 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 96/255 (37%), Gaps = 38/255 (14%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V++ I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK--------TLYL 90
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
V E E L G +++ QI AV + + +VH ++ ++++
Sbjct: 91 VMEYASG-GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDA 148
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ F +EF N+ + Y EL + +K +D
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLD-------TFCGSPPYAAPELFQG-----KKYDGPEVDV 196
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSM----PSRRL 272
W LG ++Y L F G L + E LR IP + D + LL PS+R
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR- 255
Query: 273 NSSKLIENSVGDFWM 287
+E + D WM
Sbjct: 256 ---GTLEQIMKDRWM 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 96/256 (37%), Gaps = 38/256 (14%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V++ I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK--------TLYL 90
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
V E E L G +++ QI AV + + +VH ++ ++++
Sbjct: 91 VMEYASG-GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDA 148
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ F +EF N+ + Y EL + +K +D
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLDE-------FCGSPPYAAPELFQG-----KKYDGPEVDV 196
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSM----PSRRL 272
W LG ++Y L F G L + E LR IP + D + LL PS+R
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR- 255
Query: 273 NSSKLIENSVGDFWMT 288
+E + D WM
Sbjct: 256 ---GTLEQIMKDRWMN 268
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 96/255 (37%), Gaps = 38/255 (14%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V++ I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK--------TLYL 90
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
V E E L G +++ QI AV + + +VH ++ ++++
Sbjct: 91 VMEYASG-GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDA 148
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ F +EF N+ + Y EL + +K +D
Sbjct: 149 DMNIKIADFGFSNEFTFGNKLD-------TFCGSPPYAAPELFQG-----KKYDGPEVDV 196
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSM----PSRRL 272
W LG ++Y L F G L + E LR IP + D + LL PS+R
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR- 255
Query: 273 NSSKLIENSVGDFWM 287
+E + D WM
Sbjct: 256 ---GTLEQIMKDRWM 267
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ + G V++ + N ++G A +K L+ ++H N++ + +
Sbjct: 35 FKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 94
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
K +IY+V + E L G + + L++I + + L N +H N
Sbjct: 95 RCKASIYLVFD--------FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 157 L------SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVE--LA 207
L ++V++T+ KL F + F + A N +Y +V Y+P E L
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVTLWYRPPELLLG 203
Query: 208 KSDWTAVRKSPPWSIDSWGLGCLIYELFS 236
+ D+ PP ID WG GC++ E+++
Sbjct: 204 ERDY-----GPP--IDLWGAGCIMAEMWT 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ + G V++ + N ++G A +K L+ ++H N++ + +
Sbjct: 35 FKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 94
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
K +IY+V + E L G + + L++I + + L N +H N
Sbjct: 95 RCKGSIYLVFD--------FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 157 L------SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVE--LA 207
L ++V++T+ KL F + F + A N +Y +V Y+P E L
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVTLWYRPPELLLG 203
Query: 208 KSDWTAVRKSPPWSIDSWGLGCLIYELFS 236
+ D+ PP ID WG GC++ E+++
Sbjct: 204 ERDY-----GPP--IDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ + G V++ + N ++G A +K L+ ++H N++ + +
Sbjct: 34 FKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
K +IY+V + E L G + + L++I + + L N +H N
Sbjct: 94 RCKGSIYLVFD--------FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 145
Query: 157 L------SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVE--LA 207
L ++V++T+ KL F + F + A N +Y +V Y+P E L
Sbjct: 146 LHRDMKAANVLITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVTLWYRPPELLLG 202
Query: 208 KSDWTAVRKSPPWSIDSWGLGCLIYELFS 236
+ D+ PP ID WG GC++ E+++
Sbjct: 203 ERDY-----GPP--IDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ + G V++ + N ++G A +K L+ ++H N++ + +
Sbjct: 35 FKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 94
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
K +IY+V + E L G + + L++I + + L N +H N
Sbjct: 95 RCKGSIYLVFD--------FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 157 L------SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVE--LA 207
L ++V++T+ KL F + F + A N +Y +V Y+P E L
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVTLWYRPPELLLG 203
Query: 208 KSDWTAVRKSPPWSIDSWGLGCLIYELFS 236
+ D+ PP ID WG GC++ E+++
Sbjct: 204 ERDY-----GPP--IDLWGAGCIMAEMWT 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 96/255 (37%), Gaps = 38/255 (14%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V++ I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK--------TLYL 83
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
V E E L G +++ QI AV + + +VH ++ ++++
Sbjct: 84 VMEYASG-GEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDA 141
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ F +EF N+ + Y EL + +K +D
Sbjct: 142 DMNIKIADFGFSNEFTFGNKLD-------TFCGSPPYAAPELFQG-----KKYDGPEVDV 189
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSM----PSRRL 272
W LG ++Y L F G L + E LR IP + D + LL PS+R
Sbjct: 190 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKR- 248
Query: 273 NSSKLIENSVGDFWM 287
+E + D WM
Sbjct: 249 ---GTLEQIMKDRWM 260
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 96/252 (38%), Gaps = 30/252 (11%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V+I I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--------TLYL 91
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
+ E E L G +++ QI AV + + ++VH ++ ++++
Sbjct: 92 IMEYASG-GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDA 149
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ ++F +NE G L A+ Y EL + +K +D
Sbjct: 150 DMNIKI------ADFGFSNEFTVGGKLD-AFCGAPPYAAPELFQG-----KKYDGPEVDV 197
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
W LG ++Y L F G L + E LR IP + D + LL
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRG 257
Query: 277 LIENSVGDFWMT 288
+E + D W+
Sbjct: 258 TLEQIMKDRWIN 269
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ L QI +L+ + +++H ++ L ++ + + L+ K+ F + + E+DG +
Sbjct: 145 YYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--- 200
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A + +K + +D W +GC++Y L G +T L
Sbjct: 201 ------LCGT---PNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249
Query: 247 -----RNTASIPKSLLPD----YQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKL 295
+N SIPK + P Q++L + P+ R ++L+ + +F+ + Y +L
Sbjct: 250 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND---EFFTSGYIPARL 304
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ L QI +L+ + +++H ++ L ++ + + L+ K+ F + + E+DG +
Sbjct: 125 YYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--- 180
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A + +K + +D W +GC++Y L G +T L
Sbjct: 181 ------LCGT---PNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 229
Query: 247 -----RNTASIPKSLLPD----YQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKL 295
+N SIPK + P Q++L + P+ R ++L+ + +F+ + Y +L
Sbjct: 230 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND---EFFTSGYIPARL 284
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ L QI +L+ + +++H ++ L ++ + + L+ K+ F + + E+DG +
Sbjct: 143 YYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--- 198
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A + +K + +D W +GC++Y L G +T L
Sbjct: 199 ------LCGT---PNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 247
Query: 247 -----RNTASIPKSLLPD----YQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKL 295
+N SIPK + P Q++L + P+ R ++L+ + +F+ + Y +L
Sbjct: 248 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND---EFFTSGYIPARL 302
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ L QI +L+ + +++H ++ L ++ + + L+ K+ F + + E+DG +
Sbjct: 119 YYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--- 174
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A + +K + +D W +GC++Y L G +T L
Sbjct: 175 ------LCGT---PNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223
Query: 247 -----RNTASIPKSLLPD----YQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKL 295
+N SIPK + P Q++L + P+ R ++L+ + +F+ + Y +L
Sbjct: 224 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND---EFFTSGYIPARL 278
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ L QI +L+ + +++H ++ L ++ + + L+ K+ F + + E+DG +
Sbjct: 121 YYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--- 176
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A + +K + +D W +GC++Y L G +T L
Sbjct: 177 ------LCGT---PNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
Query: 247 -----RNTASIPKSLLPD----YQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKL 295
+N SIPK + P Q++L + P+ R ++L+ + +F+ + Y +L
Sbjct: 226 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND---EFFTSGYIPARL 280
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS--EFDGNNEAANGP 189
+ L QI +L+ + +++H ++ L ++ + + L+ K+ F + + E+DG +
Sbjct: 121 YYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--- 176
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246
L G P +A + +K + +D W +GC++Y L G +T L
Sbjct: 177 ------LCGT---PNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
Query: 247 -----RNTASIPKSLLPD----YQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKL 295
+N SIPK + P Q++L + P+ R ++L+ + +F+ + Y +L
Sbjct: 226 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND---EFFTSGYIPARL 280
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 88/239 (36%), Gaps = 34/239 (14%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V++ I T L V+ + + HPNI+ E E T+Y+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEK--------TLYL 90
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
V E E L G +++ QI AV + + +VH ++ ++++
Sbjct: 91 VXEYASG-GEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDA 148
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
+ K+ F +EF N+ A+ Y EL + +K +D
Sbjct: 149 DXNIKIADFGFSNEFTFGNKLD-------AFCGAPPYAAPELFQG-----KKYDGPEVDV 196
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSM----PSRR 271
W LG ++Y L F G L + E LR IP D + LL PS+R
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLILNPSKR 255
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 49/240 (20%)
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMP------LSE 114
G + +N VK ++HP+IL + E N +Y+V E L
Sbjct: 53 GMVQRVQNEVKIHCQLKHPSILELYNYFEDSNY--------VYLVLEMCHNGEMNRYLKN 104
Query: 115 KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174
++K E R ++QI + +L++ ++H ++ LS++++T+ ++ K+ F
Sbjct: 105 RVKPFS-ENEARH-----FMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFG 157
Query: 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234
+ ++ +E Y Y E+A R + D W LGC+ Y L
Sbjct: 158 LATQLKMPHEK------HYTLCGTPNYISPEIA------TRSAHGLESDVWSLGCMFYTL 205
Query: 235 FSGMRLSKTEELRNTASIPKSLLPDYQ--------------RLLSSMPSRRLNSSKLIEN 280
G T+ ++NT + K +L DY+ +LL P+ RL+ S ++++
Sbjct: 206 LIGRPPFDTDTVKNT--LNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 30/251 (11%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V+I I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--------TLYL 88
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
+ E E L G +++ QI AV + + ++VH ++ ++++
Sbjct: 89 IMEYASG-GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDA 146
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ ++F +NE G L + Y EL + +K +D
Sbjct: 147 DMNIKI------ADFGFSNEFTVGGKLD-TFCGSPPYAAPELFQG-----KKYDGPEVDV 194
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
W LG ++Y L F G L + E LR IP + D + LL
Sbjct: 195 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRG 254
Query: 277 LIENSVGDFWM 287
+E + D W+
Sbjct: 255 TLEQIMKDRWI 265
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 33/236 (13%)
Query: 41 SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100
+KD G V+I ++ A +K L+ +RH N++ L + K
Sbjct: 46 NKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL--------EVCKKKK 97
Query: 101 TIYIVTEPVMPLSEKIKEL---GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157
Y+V E V EL GL+ +Y L QI + F ++ ++H ++
Sbjct: 98 RWYLVFEFVDHTILDDLELFPNGLDYQVVQKY----LFQIINGIGFCHSH-NIIHRDIKP 152
Query: 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQ-YKPVELAKSDWTAVRK 216
+++V+Q+ KL F G P Y V + Y+ EL D +
Sbjct: 153 ENILVSQSGVVKLCDF-------GFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK- 204
Query: 217 SPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMP 268
++D W +GCL+ E+F G L S ++L + +L+P +Q L + P
Sbjct: 205 ----AVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQI 137
HP I+A + E E P PL + E + RD + G
Sbjct: 71 HPAIVAVYDTGEAET---------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 138 AKAVSFLNNDCK---------LVHGNVCLSSVVVTQTLDWKLHAFDVLSEF-DGNNEAAN 187
+A+ + + C+ ++H +V ++++++ T K+ F + D N
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS--- 172
Query: 188 GPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ Q A ++G AQY E A+ D R D + LGC++YE+ +G
Sbjct: 173 --VTQTAAVIGTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQI 137
HP I+A + E E P PL + E + RD + G
Sbjct: 71 HPAIVAVYDTGEAET---------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 138 AKAVSFLNNDCK---------LVHGNVCLSSVVVTQTLDWKLHAFDVLSEF-DGNNEAAN 187
+A+ + + C+ ++H +V ++++++ T K+ F + D N
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS--- 172
Query: 188 GPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ Q A ++G AQY E A+ D R D + LGC++YE+ +G
Sbjct: 173 --VTQTAAVIGTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQI 137
HP I+A + E E P PL + E + RD + G
Sbjct: 71 HPAIVAVYDTGEAET---------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 138 AKAVSFLNNDCK---------LVHGNVCLSSVVVTQTLDWKLHAFDVLSEF-DGNNEAAN 187
+A+ + + C+ ++H +V ++++++ T K+ F + D N
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS--- 172
Query: 188 GPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ Q A ++G AQY E A+ D R D + LGC++YE+ +G
Sbjct: 173 --VTQTAAVIGTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQI 137
HP I+A + E E P PL + E + RD + G
Sbjct: 71 HPAIVAVYATGEAET---------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 138 AKAVSFLNNDCK---------LVHGNVCLSSVVVTQTLDWKLHAFDVLSEF-DGNNEAAN 187
+A+ + + C+ ++H +V ++++++ T K+ F + D N
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS--- 172
Query: 188 GPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ Q A ++G AQY E A+ D R D + LGC++YE+ +G
Sbjct: 173 --VTQTAAVIGTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTG 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQI 137
HP I+A + E E P PL + E + RD + G
Sbjct: 71 HPAIVAVYDTGEAET---------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 138 AKAVSFLNNDCK---------LVHGNVCLSSVVVTQTLDWKLHAFDVLSEF-DGNNEAAN 187
+A+ + + C+ ++H +V ++++++ T K+ F + D N
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS--- 172
Query: 188 GPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ Q A ++G AQY E A+ D R D + LGC++YE+ +G
Sbjct: 173 --VXQTAAVIGTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTG 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQI 137
HP I+A + E E P PL + E + RD + G
Sbjct: 88 HPAIVAVYDTGEAET---------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 132
Query: 138 AKAVSFLNNDCK---------LVHGNVCLSSVVVTQTLDWKLHAFDVLSEF-DGNNEAAN 187
+A+ + + C+ ++H +V ++++++ T K+ F + D N
Sbjct: 133 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS--- 189
Query: 188 GPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ Q A ++G AQY E A+ D R D + LGC++YE+ +G
Sbjct: 190 --VTQTAAVIGTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTG 232
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ ++D G V+I + A ++ L+ ++HPN++ L +
Sbjct: 20 FKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL--------EVF 71
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRD--EYYAWGLN-QIAKAVSFLN-NDCKLVH 152
K +++V E + L+ QR E+ + Q +AV+F + ++C +H
Sbjct: 72 RRKRRLHLVFE----YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC--IH 125
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQ-YKPVELAKSDW 211
+V ++++T+ H+ L +F G GP Y V + Y+ EL D
Sbjct: 126 RDVKPENILITK------HSVIKLCDF-GFARLLTGPSDYYDDEVATRWYRSPELLVGD- 177
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSS 266
+ PP +D W +GC+ EL SG+ L S ++L L+P +Q++ S+
Sbjct: 178 --TQYGPP--VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 93/251 (37%), Gaps = 30/251 (11%)
Query: 45 GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104
G V++ I T L V+ ++ + HPNI+ E E T+Y+
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--------TLYL 91
Query: 105 VTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164
V E E L G +++ QI AV + + +VH ++ ++++
Sbjct: 92 VMEYASG-GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY-IVHRDLKAENLLLDG 149
Query: 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDS 224
++ K+ F +EF N+ + Y EL + +K +D
Sbjct: 150 DMNIKIADFGFSNEFTVGNKLD-------TFCGSPPYAAPELFQG-----KKYDGPEVDV 197
Query: 225 WGLGCLIYEL------FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
W LG ++Y L F G L + E LR IP + D + LL +
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVLNPIKRG 257
Query: 277 LIENSVGDFWM 287
+E + D WM
Sbjct: 258 SLEQIMKDRWM 268
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 21/203 (10%)
Query: 39 GTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98
T K G V+I I + L R +K L+ +H NI+ + ++ D+
Sbjct: 30 ATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITIFN---IQRPDSFEN 85
Query: 99 KITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158
+YI+ E + ++ + +Y+ + Q +AV L+ ++H ++ S
Sbjct: 86 FNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY---QTLRAVKVLHGS-NVIHRDLKPS 141
Query: 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW----TAV 214
++++ D K+ F + D + + P G Q VE + W +
Sbjct: 142 NLLINSNCDLKVCDFGLARIIDESAADNSEP-------TGQQSGMVEFVATRWYRAPEVM 194
Query: 215 RKSPPWS--IDSWGLGCLIYELF 235
S +S +D W GC++ ELF
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELF 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 44 DGSPVSIFSISGTNAQDGHLAA-ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102
DG PV++ + + D A + L+ + HPN++ + S +N ++ I
Sbjct: 56 DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN------ELNI 109
Query: 103 YIVTEPVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNVCLSSVV 161
+ LS IK + E W Q+ A+ +++ +++H ++ ++V
Sbjct: 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVF 168
Query: 162 VTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQY--KPVELAKSDWTAVRKSPP 219
+T T KL + F AA+ LVG Y P + ++ +
Sbjct: 169 ITATGVVKLGDLGLGRFFSSKTTAAHS-------LVGTPYYMSPERIHENGYN------- 214
Query: 220 WSIDSWGLGCLIYEL 234
+ D W LGCL+YE+
Sbjct: 215 FKSDIWSLGCLLYEM 229
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 30 AWGSWSHFQGTSKDDGSPVSIFSISGTNAQDG-HLAAARNG--VKRLRTVRHPNILAFLH 86
A+G+ ++ G V++ S+ N ++G ++ R ++RL HPN++ +
Sbjct: 16 AYGTV--YKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLM- 72
Query: 87 STEVENIDATSTKITIYIVTE---------------PVMPLSEKIKELGLEGSQRDEYYA 131
+V T +I + +V E P +P +E IK+L
Sbjct: 73 --DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP-AETIKDL------------ 117
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPML 191
+ Q + + FL+ +C +VH ++ +++VT KL F + + + + A P++
Sbjct: 118 --MRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVV 172
Query: 192 QYAWLVGAQYK-PVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235
W Y+ P L +S + +D W +GC+ E+F
Sbjct: 173 VTLW-----YRAPEVLLQSTYAT-------PVDMWSVGCIFAEMF 205
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 64/254 (25%)
Query: 63 LAAARNGVKR---------LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLS 113
L+++R GV R LR +RHPNI+ LH D K + ++ E V
Sbjct: 43 LSSSRRGVSREEIEREVNILREIRHPNIIT-LH-------DIFENKTDVVLILELVSG-G 93
Query: 114 EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD------ 167
E L + S ++ L QI V +L++ ++ H ++ ++++ LD
Sbjct: 94 ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIML---LDKNVPNP 149
Query: 168 -WKLHAFDVLSEFDGNNEAAN---GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223
KL F + + + NE N P +V Y+P+ L D
Sbjct: 150 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV--NYEPLGL--------------EAD 193
Query: 224 SWGLGCLIYELFSG----MRLSKTEELRNTASIPKSLLPDY------------QRLLSSM 267
W +G + Y L SG + +K E L N +++ +Y +RLL
Sbjct: 194 MWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKD 253
Query: 268 PSRRLNSSKLIENS 281
P RR+ ++ +E+S
Sbjct: 254 PKRRMTIAQSLEHS 267
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 69 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 118 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADF---------GWSVHAPS 164
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM---RLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE GM +E
Sbjct: 165 SRRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIEN 280
S + PD+ RLL S+RL ++++E+
Sbjct: 219 YRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 64/254 (25%)
Query: 63 LAAARNGVKR---------LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLS 113
L+++R GV R LR +RHPNI+ LH D K + ++ E V
Sbjct: 50 LSSSRRGVSREEIEREVNILREIRHPNIIT-LH-------DIFENKTDVVLILELVSG-G 100
Query: 114 EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD------ 167
E L + S ++ L QI V +L++ ++ H ++ ++++ LD
Sbjct: 101 ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIML---LDKNVPNP 156
Query: 168 -WKLHAFDVLSEFDGNNEAAN---GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223
KL F + + + NE N P +V Y+P+ L D
Sbjct: 157 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV--NYEPLGL--------------EAD 200
Query: 224 SWGLGCLIYELFSG----MRLSKTEELRNTASIPKSLLPDY------------QRLLSSM 267
W +G + Y L SG + +K E L N +++ +Y +RLL
Sbjct: 201 MWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKD 260
Query: 268 PSRRLNSSKLIENS 281
P RR+ ++ +E+S
Sbjct: 261 PKRRMXIAQSLEHS 274
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 69/164 (42%), Gaps = 26/164 (15%)
Query: 76 VRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLN 135
+RHPNIL + + IY++ E P E KEL G ++ A +
Sbjct: 72 LRHPNILRM--------YNYFHDRKRIYLMLE-FAPRGELYKELQKHGRFDEQRSATFME 122
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
++A A+ + + + K++H ++ ++++ + K+ F + + P L+
Sbjct: 123 ELADALHYCH-ERKVIHRDIKPENLLMGYKGELKIADF---------GWSVHAPSLRRRX 172
Query: 196 LVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
+ G Y P E+ + K+ +D W G L YE GM
Sbjct: 173 MCGTLDYLPPEMIEG------KTHDEKVDLWCAGVLCYEFLVGM 210
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 76 VRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLN 135
+RHPNIL + + IY++ E P E KEL G ++ A +
Sbjct: 71 LRHPNILRM--------YNYFHDRKRIYLMLE-FAPRGELYKELQKHGRFDEQRSATFME 121
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
++A A+ + + K++H ++ ++++ + K+ F + + P L+
Sbjct: 122 ELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADF---------GWSVHAPSLRRRX 171
Query: 196 LVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
+ G Y P E+ + K+ +D W G L YE GM
Sbjct: 172 MCGTLDYLPPEMIEG------KTHDEKVDLWCAGVLCYEFLVGM 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 76 VRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLN 135
+RHPNIL + + IY++ E P E KEL G ++ A +
Sbjct: 71 LRHPNILRM--------YNYFHDRKRIYLMLE-FAPRGELYKELQKHGRFDEQRSATFME 121
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
++A A+ + + K++H ++ ++++ + K+ F + + P L+
Sbjct: 122 ELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADF---------GWSVHAPSLRRRX 171
Query: 196 LVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
+ G Y P E+ + K+ +D W G L YE GM
Sbjct: 172 MCGTLDYLPPEMIEG------KTHDEKVDLWCAGVLCYEFLVGM 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 69 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 118 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADF---------GWSVHAPS 164
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM---RLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE GM +E
Sbjct: 165 SRRDTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIEN 280
S + PD+ RLL S+RL ++++E+
Sbjct: 219 YRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 30 AWGSWSHFQGTSKDDGSPVSIFSISGTNAQDG-HLAAARNG--VKRLRTVRHPNILAFLH 86
A+G+ ++ G V++ S+ N ++G ++ R ++RL HPN++ +
Sbjct: 16 AYGTV--YKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLM- 72
Query: 87 STEVENIDATSTKITIYIVTE---------------PVMPLSEKIKELGLEGSQRDEYYA 131
+V T +I + +V E P +P +E IK+L
Sbjct: 73 --DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP-AETIKDL------------ 117
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPML 191
+ Q + + FL+ +C +VH ++ +++VT KL F + + + + A P++
Sbjct: 118 --MRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVV 172
Query: 192 QYAWLVGAQYK-PVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235
W Y+ P L +S + +D W +GC+ E+F
Sbjct: 173 VTLW-----YRAPEVLLQSTYAT-------PVDMWSVGCIFAEMF 205
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 21/203 (10%)
Query: 39 GTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98
T K G V+I I + L R +K L+ +H NI+ + ++ D+
Sbjct: 30 ATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITIFN---IQRPDSFEN 85
Query: 99 KITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158
+YI+ E + ++ + +Y+ + Q +AV L+ ++H ++ S
Sbjct: 86 FNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY---QTLRAVKVLHGS-NVIHRDLKPS 141
Query: 159 SVVVTQTLDWKLHAFD---VLSEFDGNNEAANGP---MLQYAWLVGAQYKPVELAKSDWT 212
++++ D K+ F ++ E +N G M +Y + V L + ++
Sbjct: 142 NLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYS 201
Query: 213 AVRKSPPWSIDSWGLGCLIYELF 235
++D W GC++ ELF
Sbjct: 202 R-------AMDVWSCGCILAELF 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 82/201 (40%), Gaps = 17/201 (8%)
Query: 39 GTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98
T K G V+I I + L R +K L+ +H NI+ + ++ D+
Sbjct: 30 ATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITIFN---IQRPDSFEN 85
Query: 99 KITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158
+YI+ E + ++ + +Y+ + Q +AV L+ ++H ++ S
Sbjct: 86 FNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY---QTLRAVKVLHGS-NVIHRDLKPS 141
Query: 159 SVVVTQTLDWKLHAFD---VLSEFDGNNEAANGPMLQYAWLVGAQ-YKPVELAKSDWTAV 214
++++ D K+ F ++ E +N G V + Y+ E+ +
Sbjct: 142 NLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYS 201
Query: 215 RKSPPWSIDSWGLGCLIYELF 235
R ++D W GC++ ELF
Sbjct: 202 R-----AMDVWSCGCILAELF 217
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 220 WS--IDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
WS D W +GC+I+E + G L +T + R ++ +R+L +PSR + ++
Sbjct: 230 WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM-------MERILGPIPSRMIRKTR 281
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 64/254 (25%)
Query: 63 LAAARNGVKR---------LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLS 113
L ++R GV R LR +RHPNI+ LH D K + ++ E V
Sbjct: 64 LXSSRRGVSREEIEREVNILREIRHPNIIT-LH-------DIFENKTDVVLILELVSG-G 114
Query: 114 EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD------ 167
E L + S ++ L QI V +L++ ++ H ++ ++++ LD
Sbjct: 115 ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIML---LDKNVPNP 170
Query: 168 -WKLHAFDVLSEFDGNNEAAN---GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223
KL F + + + NE N P +V Y+P+ L D
Sbjct: 171 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV--NYEPLGLEA--------------D 214
Query: 224 SWGLGCLIYELFSG----MRLSKTEELRNTASIPKSLLPDY------------QRLLSSM 267
W +G + Y L SG + +K E L N +++ +Y +RLL
Sbjct: 215 MWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKD 274
Query: 268 PSRRLNSSKLIENS 281
P RR+ ++ +E+S
Sbjct: 275 PKRRMXIAQSLEHS 288
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 93/225 (41%), Gaps = 54/225 (24%)
Query: 30 AWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGV---KRLRTVRHPNILAFLH 86
A+G+ ++ G V++ S+ N ++G + V +RL HPN++ +
Sbjct: 16 AYGTV--YKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLM- 72
Query: 87 STEVENIDATSTKITIYIVTE---------------PVMPLSEKIKELGLEGSQRDEYYA 131
+V T +I + +V E P +P +E IK+L
Sbjct: 73 --DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP-AETIKDL------------ 117
Query: 132 WGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPML 191
+ Q + + FL+ +C +VH ++ +++VT KL F + + + + A P++
Sbjct: 118 --MRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVV 172
Query: 192 QYAWLVGAQYK-PVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235
W Y+ P L +S + +D W +GC+ E+F
Sbjct: 173 VTLW-----YRAPEVLLQSTYAT-------PVDMWSVGCIFAEMF 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.8 bits (81), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 68 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 117 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 163
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ A L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 164 SRRAALCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 264
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 48/229 (20%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAW 132
+RHPNIL + H ST++ + + P+ + ++++L QR Y
Sbjct: 65 LRHPNILRLYGYFHD---------STRVYLILEYAPLGTVYRELQKLSKFDEQRTATY-- 113
Query: 133 GLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192
+ ++A A+S+ ++ K++H ++ ++++ + K+ F + + P +
Sbjct: 114 -ITELANALSYCHSK-KVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPSSR 162
Query: 193 YAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEELRN 248
A L G Y P E+ + + +D W LG L YE G + ++
Sbjct: 163 RAALCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYK 216
Query: 249 TASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 217 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 65 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 114 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 160
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ A L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 161 SRRAALCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 49/182 (26%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTE---------------PVMPLSE 114
++RL HPN++ + +V T +I + +V E P +P +E
Sbjct: 65 LRRLEAFEHPNVVRLM---DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP-AE 120
Query: 115 KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174
IK+L + Q + + FL+ +C +VH ++ +++VT KL F
Sbjct: 121 TIKDL--------------MRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFG 165
Query: 175 VLSEFDGNNEAANGPMLQYAWLVGAQYK-PVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233
+ + + + A P++ W Y+ P L +S + +D W +GC+ E
Sbjct: 166 LARIY--SYQMALTPVVVTLW-----YRAPEVLLQSTYAT-------PVDMWSVGCIFAE 211
Query: 234 LF 235
+F
Sbjct: 212 MF 213
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 52/240 (21%)
Query: 67 RNGVKRLRTVRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGL 121
R V+ +RHPNIL + H DAT +Y++ E P+ + ++++L
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSK 130
Query: 122 EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181
QR Y + ++A A+S+ ++ +++H ++ ++++ + K+ F
Sbjct: 131 FDEQRTATY---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGW------ 180
Query: 182 NNEAANGPMLQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--- 237
+ + P + L G Y P E+ + + +D W LG L YE G
Sbjct: 181 ---SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPP 231
Query: 238 MRLSKTEELRNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
+ +E S + PD+ RLL PS+R +++E+ W+T
Sbjct: 232 FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 287
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 41 SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100
S +DG I I+ + +R V L ++HPNI+ + S E
Sbjct: 45 STEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG-------- 96
Query: 101 TIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158
++YIV + L ++I Q D+ W + QI A+ ++ D K++H ++
Sbjct: 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV-QICLALKHVH-DRKILHRDIKSQ 154
Query: 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSP 218
++ +T+ +L F + + E A A + Y E+ ++
Sbjct: 155 NIFLTKDGTVQLGDFGIARVLNSTVELAR------ACIGTPYYLSPEICENK-------- 200
Query: 219 PWS--IDSWGLGCLIYEL 234
P++ D W LGC++YEL
Sbjct: 201 PYNNKSDIWALGCVLYEL 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 65 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 114 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 160
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 65 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 114 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 160
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 161 SRRTXLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 261
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 48/229 (20%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAW 132
+RHPNIL + H DAT +Y++ E P E KEL ++ A
Sbjct: 70 LRHPNILRLYGYFH-------DATR----VYLILE-YAPRGEVYKELQKLSKFDEQRTAT 117
Query: 133 GLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P +
Sbjct: 118 YITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPSSR 167
Query: 193 YAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEELRN 248
L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 168 RTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 249 TASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 222 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 266
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 65 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 114 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 160
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 161 SRRXXLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 261
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 69 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 117
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 118 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 164
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 165 SRRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 219 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 65 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 114 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 160
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 67 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 116 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 162
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 163 SRRXXLCGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 217 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 263
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 82 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 130
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 131 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGW---------SVHAPS 177
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 178 SRRTTLCGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPPFEANTYQET 231
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 232 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 278
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 68 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 117 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANF---------GWSVHAPS 163
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 164 SRRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 264
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 70 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 119 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 165
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 166 SRRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 220 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 67 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 116 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGW---------SVHAPS 162
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 163 SRRTTLCGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 217 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 64 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 112
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 113 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 159
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 160 SRRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 214 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 68 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 117 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 163
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 164 SRRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 62 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 110
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 111 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 157
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 158 SRRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 212 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 48/229 (20%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAW 132
+RHPNIL + H DAT +Y++ E P E KEL ++ A
Sbjct: 70 LRHPNILRLYGYFH-------DATR----VYLILE-YAPRGEVYKELQKLSKFDEQRTAT 117
Query: 133 GLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P +
Sbjct: 118 YITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPSSR 167
Query: 193 YAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEELRN 248
L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 249 TASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 222 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 266
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI--VTEPVMPLSEKIKELGLEGSQRD 127
++ L T HPN++ V D TK+T+ V + + +K+ E G+
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTD-RETKLTLVFEHVDQDLTTYLDKVPEPGVPT---- 119
Query: 128 EYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187
E + Q+ + + FL++ ++VH ++ +++VT + KL F G +
Sbjct: 120 ETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADF-------GLARIYS 171
Query: 188 GPMLQYAWLVGAQYK-PVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235
M + +V Y+ P L +S + +D W +GC+ E+F
Sbjct: 172 FQMALTSVVVTLWYRAPEVLLQSSYAT-------PVDLWSVGCIFAEMF 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 68 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 117 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 163
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 164 SRRXXLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 68 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 117 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 163
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 164 SRRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 264
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 70 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 119 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 165
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E + + +D W LG L YE G + +E
Sbjct: 166 SRRTTLCGTLDYLPPEXIEG------RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 220 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHP----WIT 266
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI--VTEPVMPLSEKIKELGLEGSQRD 127
++ L T HPN++ V D TK+T+ V + + +K+ E G+
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTD-RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 128 EYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187
+ + Q+ + + FL++ ++VH ++ +++VT + KL F G +
Sbjct: 124 DM----MFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADF-------GLARIYS 171
Query: 188 GPMLQYAWLVGAQYK-PVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235
M + +V Y+ P L +S + +D W +GC+ E+F
Sbjct: 172 FQMALTSVVVTLWYRAPEVLLQSSYAT-------PVDLWSVGCIFAEMF 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 66 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 115 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSCHAPS 161
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 216 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 262
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI--VTEPVMPLSEKIKELGLEGSQRD 127
++ L T HPN++ V D TK+T+ V + + +K+ E G+
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTD-RETKLTLVFEHVDQDLTTYLDKVPEPGVPT---- 119
Query: 128 EYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187
E + Q+ + + FL++ ++VH ++ +++VT + KL F G +
Sbjct: 120 ETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADF-------GLARIYS 171
Query: 188 GPMLQYAWLVGAQYK-PVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235
M + +V Y+ P L +S + +D W +GC+ E+F
Sbjct: 172 FQMALTSVVVTLWYRAPEVLLQSSYAT-------PVDLWSVGCIFAEMF 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 66 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 115 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 161
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 162 SRRDTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 216 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 262
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 52/240 (21%)
Query: 67 RNGVKRLRTVRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGL 121
R V+ +RHPNIL + H DAT +Y++ E P+ + ++++L
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSK 130
Query: 122 EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181
QR Y + ++A A+S+ ++ +++H ++ ++++ + K+ F
Sbjct: 131 FDEQRTATY---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGW------ 180
Query: 182 NNEAANGPMLQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--- 237
+ + P + L G Y P E+ + + +D W LG L YE G
Sbjct: 181 ---SVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK------VDLWSLGVLCYEFLVGKPP 231
Query: 238 MRLSKTEELRNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
+ +E S + PD+ RLL PS+R +++E+ W+T
Sbjct: 232 FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 287
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 66 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 115 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 161
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 162 SRRTDLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 216 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 262
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79
P ++G A+GS K G V+I +S + A + L+ ++H
Sbjct: 47 PTHVGS---GAYGSVC--SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 80 NILAFLHSTEVENIDATSTKITIYIVTEPVMPL--SEKIKELGLEGSQRDEYYAWGLNQI 137
N++ L ++ ++ + + VMP ++ K +G+E S+ E + + Q+
Sbjct: 102 NVIGLL------DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSE--EKIQYLVYQM 153
Query: 138 AKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLV 197
K + ++++ +VH ++ ++ V + + K+ F G A+ M Y +V
Sbjct: 154 LKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDF-------GLARHADAEMTGY--VV 203
Query: 198 GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245
Y+ E+ S W ++ +D W +GC++ E+ +G L K ++
Sbjct: 204 TRWYRAPEVILS-WMHYNQT----VDIWSVGCIMAEMLTGKTLFKGKD 246
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 32/153 (20%)
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
+I A+ +L+++ +V+ ++ L ++++ + K+ F + E +G ++
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-----GIKDGATMKXFC 172
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKT 243
P L +D+ ++D WGLG ++YE+ G L
Sbjct: 173 GTPEYLAPEVLEDNDYGR-------AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 225
Query: 244 EELRNTASIPKSLLPDYQRLLSSM----PSRRL 272
EE+R P++L P+ + LLS + P +RL
Sbjct: 226 EEIR----FPRTLGPEAKSLLSGLLKKDPKQRL 254
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 65 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 114 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 160
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 161 SRRTDLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 70 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 119 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 165
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 166 SRRTDLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 220 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 266
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 32/153 (20%)
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
+I A+ +L+++ +V+ ++ L ++++ + K+ F + E +G ++
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-----GIKDGATMKXFC 171
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKT 243
P L +D+ ++D WGLG ++YE+ G L
Sbjct: 172 GTPEYLAPEVLEDNDYGR-------AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 224
Query: 244 EELRNTASIPKSLLPDYQRLLSSM----PSRRL 272
EE+R P++L P+ + LLS + P +RL
Sbjct: 225 EEIR----FPRTLGPEAKSLLSGLLKKDPKQRL 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 32/153 (20%)
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
+I A+ +L+++ +V+ ++ L ++++ + K+ F + E +G ++
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-----GIKDGATMKXFC 170
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKT 243
P L +D+ ++D WGLG ++YE+ G L
Sbjct: 171 GTPEYLAPEVLEDNDYGR-------AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 223
Query: 244 EELRNTASIPKSLLPDYQRLLSSM----PSRRL 272
EE+R P++L P+ + LLS + P +RL
Sbjct: 224 EEIR----FPRTLGPEAKSLLSGLLKKDPKQRL 252
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 65 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 114 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 160
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 161 SRRTDLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 76 VRHPNIL---AFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
+RHPNIL + H DAT +Y++ E P+ + ++++L QR Y
Sbjct: 68 LRHPNILRLYGYFH-------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ ++A A+S+ ++ +++H ++ ++++ + K+ F + + P
Sbjct: 117 ---ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADF---------GWSVHAPS 163
Query: 191 LQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---MRLSKTEEL 246
+ L G Y P E+ + + +D W LG L YE G + +E
Sbjct: 164 SRRDDLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 247 RNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIENSVGDFWMT 288
S + PD+ RLL PS+R +++E+ W+T
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP----WIT 264
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 32/153 (20%)
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
+I A+ +L+++ +V+ ++ L ++++ + K+ F + E +G ++
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-----GIKDGATMKTFC 313
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKT 243
P L +D+ ++D WGLG ++YE+ G L
Sbjct: 314 GTPEYLAPEVLEDNDYGR-------AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 366
Query: 244 EELRNTASIPKSLLPDYQRLLSSM----PSRRL 272
EE+R P++L P+ + LLS + P +RL
Sbjct: 367 EEIR----FPRTLGPEAKSLLSGLLKKDPKQRL 395
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 66 ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEG 123
A ++ L+ +RH N++ L +V D T T + + P M L + +K L G
Sbjct: 71 AYRELRLLKHMRHENVIGLL---DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKL-G 126
Query: 124 SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN 183
R ++ + Q+ K + +++ ++H ++ ++ V + + K+ F + + D
Sbjct: 127 EDRIQFLVY---QMLKGLRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 182
Query: 184 EAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242
+V Y+ E+ +W ++ +D W +GC++ E+ +G L K
Sbjct: 183 XGX---------VVTRWYRAPEVI-LNWMRYTQT----VDIWSVGCIMAEMITGKTLFK 227
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 32/153 (20%)
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
+I A+ +L+++ +V+ ++ L ++++ + K+ F + E +G ++
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-----GIKDGATMKTFC 310
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKT 243
P L +D+ ++D WGLG ++YE+ G L
Sbjct: 311 GTPEYLAPEVLEDNDYGR-------AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 363
Query: 244 EELRNTASIPKSLLPDYQRLLSSM----PSRRL 272
EE+R P++L P+ + LLS + P +RL
Sbjct: 364 EEIR----FPRTLGPEAKSLLSGLLKKDPKQRL 392
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 125
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 126 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT-GF 183
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 224
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++G SK + V++ I + + A R V L+ ++H NI+ LH D
Sbjct: 19 YKGKSKLTDNLVALKEIRLEHEEGAPCTAIRE-VSLLKDLKHANIVT-LH-------DII 69
Query: 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
T+ ++ +V E + L + + + G + + L Q+ + +++ + K++H ++
Sbjct: 70 HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHN--VKLFLFQLLRGLAYCHRQ-KVLHRDL 126
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGAQYKP--VELAKSDWT 212
++++ + + KL F G A + P Y +V Y+P + L +D++
Sbjct: 127 KPQNLLINERGELKLADF-------GLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSG 237
ID WG+GC+ YE+ +G
Sbjct: 180 T-------QIDMWGVGCIFYEMATG 197
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +Y+VT + + +L +++
Sbjct: 92 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYLVTHL---MGADLYKLLKTQHLSNDH 145
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 146 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-GF 203
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 244
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 74 IKILLAFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 127
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 128 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 185
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 226
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79
P ++G A+GS K G V+I +S + A + L+ ++H
Sbjct: 29 PTHVGS---GAYGSVC--SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 80 NILAFLHSTEVENIDATSTKITIYIVTEPVMPL--SEKIKELGLEGSQRDEYYAWGLNQI 137
N++ L ++ ++ + + VMP ++ K +GL+ S+ E + + Q+
Sbjct: 84 NVIGLL------DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSE--EKIQYLVYQM 135
Query: 138 AKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLV 197
K + ++++ +VH ++ ++ V + + K+ F G A+ M Y +V
Sbjct: 136 LKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDF-------GLARHADAEMTGY--VV 185
Query: 198 GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242
Y+ E+ S W ++ +D W +GC++ E+ +G L K
Sbjct: 186 TRWYRAPEVILS-WMHYNQT----VDIWSVGCIMAEMLTGKTLFK 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 92 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 145
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 146 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 203
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 244
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 80 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 133
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 134 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 191
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 125
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 126 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 183
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 125
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 126 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 183
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 224
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 70 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 123
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 124 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 181
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 222
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 129
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 130 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-GF 187
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 125
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 126 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-GF 183
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 224
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 77 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 130
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 131 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 188
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 74 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 127
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 128 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 185
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 78 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 131
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 132 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 189
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 69 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 122
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 123 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 180
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 129
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 130 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 187
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 129
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 130 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 187
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + ++ K L + D +
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQD--LMETDLYKLLKCQHLSND-H 129
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 130 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 187
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 70 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 123
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 124 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 181
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 222
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
+I A+ +L+ ++H ++ ++++ + + ++ F ++ A A+
Sbjct: 138 EIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN----AF 192
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
+ AQY EL KS S D W LGC+IY+L +G+
Sbjct: 193 VGTAQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 222 IDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
D W +GC+++E + G L +T E R L +++L +PS ++ ++
Sbjct: 220 CDVWSIGCILFEYYRGFTLFQTHENREH-------LVMMEKILGPIPSHMIHRTR 267
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 78/196 (39%), Gaps = 34/196 (17%)
Query: 57 NAQDGHLAAARNGVKRLRTVRHPNILAF---LHSTEVENIDATSTKITIYIVTEPVMPLS 113
++ + HL ++ L++++H NI+ + +S N+ + + + +
Sbjct: 50 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK 109
Query: 114 EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173
E+I + L +QI K + +L + +H N+ +++V K+ F
Sbjct: 110 ERIDHIKL---------LQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDF 159
Query: 174 DVLS------EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227
+ E+ E P+ YA P L +S ++ + D W
Sbjct: 160 GLTKVLPQDKEYYKVKEPGESPIFWYA--------PESLTESKFSV-------ASDVWSF 204
Query: 228 GCLIYELFSGMRLSKT 243
G ++YELF+ + SK+
Sbjct: 205 GVVLYELFTYIEKSKS 220
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 222 IDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
D W +GC+++E + G L +T E R L +++L +PS ++ ++
Sbjct: 229 CDVWSIGCILFEYYRGFTLFQTHENREH-------LVMMEKILGPIPSHMIHRTR 276
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 57 NAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEK 115
NA+D H A RN L V+HP I V+ I A T +Y++ E + E
Sbjct: 61 NAKDTAHTKAERN---ILEEVKHPFI--------VDLIYAFQTGGKLYLILE-YLSGGEL 108
Query: 116 IKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175
+L EG ++ + L +I+ A+ L+ +++ ++ ++++ KL
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKL----- 162
Query: 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL- 234
++F E+ + + + + +Y E+ +R ++D W LG L+Y++
Sbjct: 163 -TDFGLCKESIHDGTVTHTFCGTIEYMAPEIL------MRSGHNRAVDWWSLGALMYDML 215
Query: 235 -----FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSMPSR 270
F+G KT + L+ ++P L + + LL + R
Sbjct: 216 TGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKR 258
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 125
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 126 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-GF 183
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 129
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 130 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-GF 187
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 228
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 222 IDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
D W +GC+++E + G L +T E R L +++L +PS ++ ++
Sbjct: 252 CDVWSIGCILFEYYRGFTLFQTHENREH-------LVMMEKILGPIPSHMIHRTR 299
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 57 NAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEK 115
NA+D H A RN L V+HP I V+ I A T +Y++ E + E
Sbjct: 61 NAKDTAHTKAERN---ILEEVKHPFI--------VDLIYAFQTGGKLYLILE-YLSGGEL 108
Query: 116 IKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175
+L EG ++ + L +I+ A+ L+ +++ ++ ++++ KL
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKL----- 162
Query: 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL- 234
++F E+ + + + + +Y E+ +R ++D W LG L+Y++
Sbjct: 163 -TDFGLCKESIHDGTVTHXFCGTIEYMAPEIL------MRSGHNRAVDWWSLGALMYDML 215
Query: 235 -----FSGMRLSKTEE--LRNTASIPKSLLPDYQRLLSSMPSR 270
F+G KT + L+ ++P L + + LL + R
Sbjct: 216 TGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKR 258
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 74 IKILLAFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 127
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 128 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT-GF 185
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ +Y + + L +T SID W +GC++ E+ S
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 226
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 78/196 (39%), Gaps = 34/196 (17%)
Query: 57 NAQDGHLAAARNGVKRLRTVRHPNILAF---LHSTEVENIDATSTKITIYIVTEPVMPLS 113
++ + HL ++ L++++H NI+ + +S N+ + + + +
Sbjct: 49 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK 108
Query: 114 EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173
E+I + L +QI K + +L + +H ++ +++V K+ F
Sbjct: 109 ERIDHIKL---------LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDF 158
Query: 174 DVLS------EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227
+ EF E P+ YA P L +S ++ + D W
Sbjct: 159 GLTKVLPQDKEFFKVKEPGESPIFWYA--------PESLTESKFSV-------ASDVWSF 203
Query: 228 GCLIYELFSGMRLSKT 243
G ++YELF+ + SK+
Sbjct: 204 GVVLYELFTYIEKSKS 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 83/186 (44%), Gaps = 33/186 (17%)
Query: 63 LAAARNGVKRLRTVRH---PNILAFLH----STEVENIDATSTKITIYIVTEPV-MPLSE 114
L AR + LR ++H N++ L +T +E+ +Y+VT + L+
Sbjct: 68 LIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFS------EVYLVTTLMGADLNN 121
Query: 115 KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174
+K L DE+ + + Q+ + + ++++ ++H ++ S+V V + + ++ F
Sbjct: 122 IVKSQALS----DEHVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDSELRILDFG 176
Query: 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234
+ + D E G ++ Y+ E+ +W ++ +D W +GC++ EL
Sbjct: 177 LARQAD---EEMTG------YVATRWYRAPEIML-NWMHYNQT----VDIWSVGCIMAEL 222
Query: 235 FSGMRL 240
G L
Sbjct: 223 LQGKAL 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
+I A+ +L+ ++H ++ ++++ + + ++ F ++ A ++
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN----SF 194
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
+ AQY EL KS S D W LGC+IY+L +G+
Sbjct: 195 VGTAQYVSPELL------TEKSASKSSDLWALGCIIYQLVAGL 231
>pdb|1R6A|A Chain A, Structure Of The Dengue Virus 2'o Methyltransferase In
Complex With S-Adenosyl Homocysteine And Ribavirin 5'
Triphosphate
Length = 295
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 475 GNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKAFQAVDQFLQI 534
GNI S +N R+LIN FT+R + T+ P + + + + + ++
Sbjct: 225 GNIVSSVN--MISRMLINRFTMRHKKATYEPDVDLGSGTRNIGIESETPNLDIIGKRIEK 282
Query: 535 VKQYHE 540
+KQ HE
Sbjct: 283 IKQEHE 288
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 198 AQYVSPELL------TEKSAXKSSDLWALGCIIYQLVAGL 231
>pdb|3H5D|A Chain A, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|B Chain B, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|C Chain C, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|D Chain D, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
Length = 311
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 9/71 (12%)
Query: 26 PY---PSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNIL 82
PY PS G + HF+ + P+ I++I G + LR HPNI+
Sbjct: 112 PYYNKPSQEGMYQHFKAIADASDLPIIIYNIPG------RVVVELTPETMLRLADHPNII 165
Query: 83 AFLHSTEVENI 93
T + N+
Sbjct: 166 GVKECTSLANM 176
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 42/189 (22%)
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTE-----PVM----- 110
G + + L+ + HPN++ + + N D +Y+V E PVM
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDH------LYMVFELVNQGPVMEVPTL 131
Query: 111 -PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169
PLSE + +Y + K + +L+ K++H ++ S+++V + K
Sbjct: 132 KPLSE----------DQARFY---FQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDGHIK 177
Query: 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK-SPPWSIDSWGLG 228
+ F V +EF G++ A L P +A + RK ++D W +G
Sbjct: 178 IADFGVSNEFKGSD----------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG 227
Query: 229 CLIYELFSG 237
+Y G
Sbjct: 228 VTLYCFVFG 236
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
+I A+ +L+ ++H ++ ++++ + + ++ F ++ A ++
Sbjct: 141 EIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN----SF 195
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
+ AQY EL KS S D W LGC+IY+L +G+
Sbjct: 196 VGTAQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|1L9K|A Chain A, Dengue Methyltransferase
pdb|2P1D|A Chain A, Crystal Structure Of Dengue Methyltransferase In Complex
With Gtp And S-Adenosyl-L-Homocysteine
pdb|2P3L|A Chain A, Crystal Structure Of Dengue Methyltransferase In Complex
With Gpppa And S-Adenosyl-L-Homocysteine
pdb|2P3O|A Chain A, Crystal Structure Of Dengue Methyltransferase In Complex
With 7megpppa And S-adenosyl-l-homocysteine
pdb|2P3Q|A Chain A, Crystal Structure Of Dengue Methyltransferase In Complex
With Gpppg And S-Adenosyl-L-Homocysteine
pdb|2P40|A Chain A, Crystal Structure Of Dengue Methyltransferase In Complex
With 7megpppg
pdb|2P41|A Chain A, Crystal Structure Of Dengue Methyltransferase In Complex
With 7megpppg2'ome And S-Adenosyl-L-Homocysteine
Length = 305
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 475 GNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKAFQAVDQFLQI 534
GNI S +N R+LIN FT+R + T+ P + + + + + ++
Sbjct: 235 GNIVSSVN--MISRMLINRFTMRHKKATYEPDVDLGSGTRNIGIESETPNLDIIGKRIEK 292
Query: 535 VKQYHE 540
+KQ HE
Sbjct: 293 IKQEHE 298
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 196 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 198 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 83/186 (44%), Gaps = 33/186 (17%)
Query: 63 LAAARNGVKRLRTVRH---PNILAFLH----STEVENIDATSTKITIYIVTEPV-MPLSE 114
L AR + LR ++H N++ L +T +E+ +Y+VT + L+
Sbjct: 60 LIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFS------EVYLVTTLMGADLNN 113
Query: 115 KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174
+K L DE+ + + Q+ + + ++++ ++H ++ S+V V + + ++ F
Sbjct: 114 IVKCQALS----DEHVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDCELRILDFG 168
Query: 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234
+ + D E G ++ Y+ E+ +W ++ +D W +GC++ EL
Sbjct: 169 LARQAD---EEMTG------YVATRWYRAPEIM-LNWMHYNQT----VDIWSVGCIMAEL 214
Query: 235 FSGMRL 240
G L
Sbjct: 215 LQGKAL 220
>pdb|1B35|C Chain C, Cricket Paralysis Virus (Crpv)
Length = 282
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 145 NNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKP 203
N D L++ C+S +V + L+ + A +V SE D E GP L++A +Y P
Sbjct: 200 NTDGALMYN--CVSGIVRVEVLNQLVAAQNVFSEIDVICEVNGGPDLEFAGPTCPRYVP 256
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 195 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 196 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 196 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 198 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 180 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 213
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 216 KSPPWSIDSWGLGCLIYELFSGM 238
KS S D W LGC+IY+L +G+
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGL 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 198 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 216 KSPPWSIDSWGLGCLIYELFSGM 238
KS S D W LGC+IY+L +G+
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGL 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 201 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 20/71 (28%)
Query: 221 SIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRLLSSM- 267
++D WGLG ++YE+ G L EE+R P++L P+ + LL+ +
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----FPRTLSPEAKSLLAGLL 240
Query: 268 ---PSRRLNSS 275
P +RL
Sbjct: 241 KKDPKQRLGGG 251
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 216 KSPPWSIDSWGLGCLIYELFSGM 238
KS S D W LGC+IY+L +G+
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGL 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 20/71 (28%)
Query: 221 SIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRLLSSM- 267
++D WGLG ++YE+ G L EE+R P++L P+ + LL+ +
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----FPRTLSPEAKSLLAGLL 245
Query: 268 ---PSRRLNSS 275
P +RL
Sbjct: 246 KKDPKQRLGGG 256
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 199 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 198 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 216 KSPPWSIDSWGLGCLIYELFSGM 238
KS S D W LGC+IY+L +G+
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGL 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 199 AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
AQY EL KS S D W LGC+IY+L +G+
Sbjct: 203 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGL 236
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 20/68 (29%)
Query: 221 SIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRLLSSM- 267
++D WGLG ++YE+ G L EE+R P++L P+ + LL+ +
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----FPRTLSPEAKSLLAGLL 240
Query: 268 ---PSRRL 272
P +RL
Sbjct: 241 KKDPKQRL 248
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 20/68 (29%)
Query: 221 SIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRLLSSM- 267
++D WGLG ++YE+ G L EE+R P++L P+ + LL+ +
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----FPRTLSPEAKSLLAGLL 240
Query: 268 ---PSRRL 272
P +RL
Sbjct: 241 KKDPKQRL 248
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 20/69 (28%)
Query: 221 SIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRLLSSM- 267
++D WGLG ++YE+ G L EE+R P++L P+ + LL+ +
Sbjct: 188 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----FPRTLSPEAKSLLAGLL 243
Query: 268 ---PSRRLN 273
P +RL
Sbjct: 244 KKDPKQRLG 252
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 20/68 (29%)
Query: 221 SIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRLLSSM- 267
++D WGLG ++YE+ G L EE+R P++L P+ + LL+ +
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----FPRTLSPEAKSLLAGLL 240
Query: 268 ---PSRRL 272
P +RL
Sbjct: 241 KKDPKQRL 248
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 216 KSPPWSIDSWGLGCLIYELFSGM 238
KS S D W LGC+IY+L +G+
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGL 209
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 30/246 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLH------STEV 90
F D V+I I T+ Q + A +K +R + H NI+ S
Sbjct: 28 FSAVDNDCDKRVAIKKIVLTDPQS--VKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85
Query: 91 ENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150
+++ + + ++YIV E + + E +G +E+ + Q+ + + ++++ +
Sbjct: 86 DDVGSLTELNSVYIVQEYMETDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHS-ANV 141
Query: 151 VHGNVCLSSVVV-TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKP--VELA 207
+H ++ +++ + T+ L K+ F + D + + G + + LV Y+ + L+
Sbjct: 142 LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY-SHKGHLSE--GLVTKWYRSPRLLLS 198
Query: 208 KSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEELRNT----ASIPKSLLPDYQR 262
+++T +ID W GC+ E+ +G L + EL SIP D Q
Sbjct: 199 PNNYTK-------AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQE 251
Query: 263 LLSSMP 268
LLS +P
Sbjct: 252 LLSVIP 257
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 20/68 (29%)
Query: 221 SIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRLLSSM- 267
++D WGLG ++YE+ G L EE+R P++L P+ + LL+ +
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----FPRTLSPEAKSLLAGLL 240
Query: 268 ---PSRRL 272
P +RL
Sbjct: 241 KKDPKQRL 248
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 222 IDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRR-LNSSKLIEN 280
ID W LGC++ EL +G L E+ + + LL MPS++ L++SK +N
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELL--------GMPSQKLLDASKRAKN 331
Query: 281 SV 282
V
Sbjct: 332 FV 333
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 222 IDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRR-LNSSKLIEN 280
ID W LGC++ EL +G L E+ + + LL MPS++ L++SK +N
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELL--------GMPSQKLLDASKRAKN 331
Query: 281 SV 282
V
Sbjct: 332 FV 333
>pdb|4E1Y|A Chain A, Alginate Lyase A1-Iii H192a Apo Form
pdb|4E1Y|B Chain B, Alginate Lyase A1-Iii H192a Apo Form
Length = 353
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 124 SQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
S+ DE + WGL + +A+ +N D VH
Sbjct: 204 SKDDELFRWGLGRYVQAMGLINEDGSFVH 232
>pdb|4F10|A Chain A, Alginate Lyase A1-Iii H192a Complexed With Tetrasaccharide
pdb|4F10|B Chain B, Alginate Lyase A1-Iii H192a Complexed With Tetrasaccharide
Length = 353
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 124 SQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
S+ DE + WGL + +A+ +N D VH
Sbjct: 204 SKDDELFRWGLGRYVQAMGLINEDGSFVH 232
>pdb|4F13|A Chain A, Alginate Lyase A1-Iii Y246f Complexed With Tetrasaccharide
pdb|4F13|B Chain B, Alginate Lyase A1-Iii Y246f Complexed With Tetrasaccharide
Length = 353
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 124 SQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
S+ DE + WGL + +A+ +N D VH
Sbjct: 204 SKDDELFRWGLGRYVQAMGLINEDGSFVH 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 37/172 (21%)
Query: 123 GSQRDEYYAWGL-NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF-- 179
G + D+ A L QI K V ++++ KL+H ++ S++ + T K+ F +++
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSK-KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL----- 234
DG + G L+Y P +++ D+ +D + LG ++ EL
Sbjct: 189 DGKRTRSKGT-LRYM-------SPEQISSQDYGK-------EVDLYALGLILAELLHVCD 233
Query: 235 --------FSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278
F+ +R ++ + K+LL Q+LLS P R N+S+++
Sbjct: 234 TAFETSKFFTDLRDGIISDIFDKKE--KTLL---QKLLSKKPEDRPNTSEIL 280
>pdb|1QAZ|A Chain A, Crystal Structure Of Alginate Lyase A1-Iii From
Sphingomonas Species A1 At 1.78a Resolution
pdb|1HV6|A Chain A, Crystal Structure Of Alginate Lyase A1-Iii Complexed With
Trisaccharide Product
Length = 351
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 124 SQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
S+ DE + WGL + +A+ +N D VH
Sbjct: 204 SKDDELFRWGLGRYVQAMGLINEDGSFVH 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 83/186 (44%), Gaps = 33/186 (17%)
Query: 63 LAAARNGVKRLRTVRH---PNILAFLH----STEVENIDATSTKITIYIVTEPV-MPLSE 114
L AR + LR ++H N++ L +T +E+ +Y+VT + L+
Sbjct: 68 LIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFS------EVYLVTTLMGADLNN 121
Query: 115 KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174
+K L DE+ + + Q+ + + ++++ ++H ++ S+V V + + ++ F
Sbjct: 122 IVKCQALS----DEHVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDSELRILDFG 176
Query: 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234
+ + D E G ++ Y+ E+ +W ++ +D W +GC++ EL
Sbjct: 177 LARQAD---EEMTG------YVATRWYRAPEIML-NWMHYNQT----VDIWSVGCIMAEL 222
Query: 235 FSGMRL 240
G L
Sbjct: 223 LQGKAL 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 92/232 (39%), Gaps = 46/232 (19%)
Query: 62 HLAAARNGVKRLRTVRHPNILAFLH----STEVENIDATSTKITIYIVTEPV-MPLSEKI 116
H ++ L+ ++H N++ L +T +E + +Y+VT + L+ +
Sbjct: 93 HAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFN------DVYLVTHLMGADLNNIV 146
Query: 117 KELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176
K L D++ + + QI + + ++++ ++H ++ S++ V + + K+ F +
Sbjct: 147 KCQKLT----DDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Query: 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236
D ++ Y+ E+ +W ++D W +GC++ EL +
Sbjct: 202 RHTDDE---------MTGYVATRWYRAPEIML-NWMHYN----MTVDIWSVGCIMAELLT 247
Query: 237 G----------------MRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRL 272
G MRL+ T + +P +Y L MP R
Sbjct: 248 GRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNF 299
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 220 WSI--DSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLL 257
W + D W GC++ EL++G L +T E ++ +S++
Sbjct: 236 WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESII 275
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 75 TVRHPNILAFL-HSTEVENIDATSTKITIYIVTEPVMPLSEKIKEL------GLEGSQRD 127
T+R +IL L HS V+ D TK + +V E L + +K+L GLE
Sbjct: 47 TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH---LDQDLKKLLDVCEGGLESVTAK 103
Query: 128 EYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187
+ LN IA +D +++H ++ ++++ + + K+ F G A
Sbjct: 104 SFLLQLLNGIAYC-----HDRRVLHRDLKPQNLLINREGELKIADF-------GLARAFG 151
Query: 188 GPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
P+ +Y +V Y+ D K +ID W +GC+ E+ +G
Sbjct: 152 IPVRKYTHEIVTLWYRA-----PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 94/231 (40%), Gaps = 33/231 (14%)
Query: 17 KDLPYNIGDPYPS-------AWG----SWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAA 65
K P+++G Y A+G ++ H + T V+I IS Q
Sbjct: 35 KGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTR------VAIKKISPFEHQTYCQRT 88
Query: 66 ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQ 125
R ++ L RH N++ ++A +YIV + + + +L
Sbjct: 89 LRE-IQILLRFRHENVIGIRDILRASTLEAMRD---VYIVQDL---METDLYKLLKSQQL 141
Query: 126 RDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA 185
+++ + L QI + + ++++ ++H ++ S++++ T D K+ F + D ++
Sbjct: 142 SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
Query: 186 ANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236
G + + + + L +T SID W +GC++ E+ S
Sbjct: 201 T-GFLTEXVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLS 243
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 40/211 (18%)
Query: 76 VRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLN 135
+ HPNIL + + IY++ E P E KEL + ++ A +
Sbjct: 80 LHHPNILRLY--------NYFYDRRRIYLILE-YAPRGELYKELQKSCTFDEQRTATIME 130
Query: 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW 195
++A A+ + HG + + + L L +++F + + P L+
Sbjct: 131 ELADALMY-------CHGKKVIHRDIKPENLLLGLKGELKIADFGW---SVHAPSLRRKT 180
Query: 196 LVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-------------MRLS 241
+ G Y P E+ + + +D W +G L YEL G R+
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEK------VDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
Query: 242 KTEELRNTASIPKSLLPDYQRLLSSMPSRRL 272
K +L+ AS+P +LL PS RL
Sbjct: 235 KV-DLKFPASVPTGAQDLISKLLRHNPSERL 264
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 75 TVRHPNILAFL-HSTEVENIDATSTKITIYIVTEPVMPLSEKIKEL------GLEGSQRD 127
T+R +IL L HS V+ D TK + +V E L + +K+L GLE
Sbjct: 47 TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH---LDQDLKKLLDVCEGGLESVTAK 103
Query: 128 EYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187
+ LN IA +D +++H ++ ++++ + + K+ F G A
Sbjct: 104 SFLLQLLNGIAYC-----HDRRVLHRDLKPQNLLINREGELKIADF-------GLARAFG 151
Query: 188 GPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
P+ +Y +V Y+ D K +ID W +GC+ E+ +G
Sbjct: 152 IPVRKYTHEVVTLWYRA-----PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 75 TVRHPNILAFL-HSTEVENIDATSTKITIYIVTEPVMPLSEKIKEL------GLEGSQRD 127
T+R +IL L HS V+ D TK + +V E L + +K+L GLE
Sbjct: 47 TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH---LDQDLKKLLDVCEGGLESVTAK 103
Query: 128 EYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187
+ LN IA +D +++H ++ ++++ + + K+ F G A
Sbjct: 104 SFLLQLLNGIAYC-----HDRRVLHRDLKPQNLLINREGELKIADF-------GLARAFG 151
Query: 188 GPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
P+ +Y +V Y+ D K +ID W +GC+ E+ +G
Sbjct: 152 IPVRKYTHEVVTLWYRA-----PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 129
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 130 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 187
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ + + + L +T SID W +GC++ E+ S
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEY 129
+K L RH NI+ I+ +YIV + + + +L +++
Sbjct: 77 IKILLRFRHENIIGINDIIRAPTIEQMKD---VYIVQDL---METDLYKLLKTQHLSNDH 130
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189
+ L QI + + ++++ ++H ++ S++++ T D K+ F + D +++ G
Sbjct: 131 ICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-GF 188
Query: 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ + + + L +T SID W +GC++ E+ S
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTK-------SIDIWSVGCILAEMLSN 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,355,089
Number of Sequences: 62578
Number of extensions: 779922
Number of successful extensions: 2503
Number of sequences better than 100.0: 182
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 2452
Number of HSP's gapped (non-prelim): 182
length of query: 778
length of database: 14,973,337
effective HSP length: 106
effective length of query: 672
effective length of database: 8,340,069
effective search space: 5604526368
effective search space used: 5604526368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)