Query 004025
Match_columns 778
No_of_seqs 473 out of 2685
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 16:14:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004025.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004025hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1243 Protein kinase [Genera 100.0 1.7E-99 4E-104 843.4 40.7 533 14-588 8-567 (690)
2 KOG2137 Protein kinase [Signal 100.0 3.8E-42 8.2E-47 385.9 24.9 433 14-513 32-492 (700)
3 KOG0593 Predicted protein kina 100.0 1.4E-40 3.1E-45 338.9 15.5 239 19-281 2-285 (396)
4 KOG0575 Polo-like serine/threo 100.0 9.6E-40 2.1E-44 361.0 20.6 248 18-293 17-279 (592)
5 KOG0595 Serine/threonine-prote 100.0 2.1E-39 4.6E-44 343.3 19.4 236 19-281 10-269 (429)
6 KOG0615 Serine/threonine prote 100.0 1E-39 2.2E-44 345.1 14.6 239 19-281 172-438 (475)
7 KOG0597 Serine-threonine prote 100.0 1.8E-39 3.8E-44 352.6 14.7 244 19-291 2-259 (808)
8 KOG0581 Mitogen-activated prot 100.0 1.7E-38 3.6E-43 334.1 19.8 235 20-281 80-336 (364)
9 KOG0600 Cdc2-related protein k 100.0 1.4E-37 2.9E-42 336.2 18.1 244 17-281 115-401 (560)
10 KOG0591 NIMA (never in mitosis 100.0 1.3E-38 2.8E-43 321.8 8.8 240 19-279 19-280 (375)
11 KOG0659 Cdk activating kinase 100.0 1.6E-37 3.5E-42 312.2 16.7 238 20-281 3-282 (318)
12 KOG0660 Mitogen-activated prot 100.0 1.1E-37 2.4E-42 326.7 15.9 244 20-281 23-311 (359)
13 KOG0661 MAPK related serine/th 100.0 6.6E-38 1.4E-42 336.4 12.5 240 17-281 8-292 (538)
14 KOG0592 3-phosphoinositide-dep 100.0 3.6E-37 7.9E-42 335.2 16.8 248 19-294 73-344 (604)
15 KOG0598 Ribosomal protein S6 k 100.0 5.1E-37 1.1E-41 322.8 16.7 239 17-281 23-282 (357)
16 KOG0663 Protein kinase PITSLRE 100.0 7.3E-37 1.6E-41 315.6 16.9 240 19-281 76-362 (419)
17 KOG0588 Serine/threonine prote 100.0 1.4E-36 3E-41 336.5 16.6 245 19-293 12-272 (786)
18 KOG0583 Serine/threonine prote 100.0 2E-35 4.3E-40 326.3 21.7 244 17-289 15-280 (370)
19 KOG0582 Ste20-like serine/thre 100.0 3.3E-35 7.1E-40 313.5 20.3 245 17-281 24-294 (516)
20 KOG0594 Protein kinase PCTAIRE 100.0 6.3E-35 1.4E-39 306.9 20.9 247 18-281 10-303 (323)
21 KOG0578 p21-activated serine/t 100.0 1.5E-35 3.3E-40 325.4 15.4 236 17-281 271-524 (550)
22 KOG0616 cAMP-dependent protein 100.0 1.1E-34 2.4E-39 295.7 17.1 236 17-281 42-298 (355)
23 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.7E-34 5.8E-39 313.9 21.2 246 20-281 1-291 (338)
24 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.9E-34 1.5E-38 306.7 22.5 240 17-281 3-289 (303)
25 cd07848 STKc_CDKL5 Catalytic d 100.0 6.3E-34 1.4E-38 303.8 21.4 238 20-281 2-285 (287)
26 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.9E-34 1.9E-38 303.8 22.2 238 19-281 5-286 (288)
27 cd05612 STKc_PRKX_like Catalyt 100.0 2.5E-34 5.4E-39 308.7 17.6 233 20-281 2-255 (291)
28 KOG0605 NDR and related serine 100.0 4.3E-34 9.3E-39 311.7 19.0 254 16-298 138-455 (550)
29 PTZ00263 protein kinase A cata 100.0 4.1E-34 8.8E-39 312.8 18.0 237 16-281 15-272 (329)
30 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-34 2.4E-39 311.0 13.0 258 19-295 97-383 (576)
31 KOG0658 Glycogen synthase kina 100.0 1.3E-34 2.9E-39 304.0 13.3 241 17-281 22-307 (364)
32 KOG0611 Predicted serine/threo 100.0 2.7E-34 5.9E-39 301.4 14.5 240 19-288 53-307 (668)
33 KOG0192 Tyrosine kinase specif 100.0 2.1E-33 4.5E-38 307.9 21.8 239 20-281 42-300 (362)
34 KOG0198 MEKK and related serin 100.0 8.4E-34 1.8E-38 302.8 17.8 243 18-281 16-277 (313)
35 cd05571 STKc_PKB Catalytic dom 100.0 1.4E-33 3E-38 307.7 19.0 230 26-281 2-252 (323)
36 cd07861 STKc_CDK1_euk Catalyti 100.0 4.6E-33 1E-37 296.3 22.5 240 20-281 1-283 (285)
37 cd07862 STKc_CDK6 Catalytic do 100.0 6.3E-33 1.4E-37 296.5 22.4 242 20-281 2-288 (290)
38 KOG0033 Ca2+/calmodulin-depend 100.0 1.1E-34 2.4E-39 288.0 7.6 238 16-281 8-268 (355)
39 cd07876 STKc_JNK2 Catalytic do 100.0 6.8E-33 1.5E-37 306.6 22.8 248 18-292 20-323 (359)
40 cd07863 STKc_CDK4 Catalytic do 100.0 6.9E-33 1.5E-37 295.7 22.0 242 20-281 1-286 (288)
41 KOG0589 Serine/threonine prote 100.0 9.8E-34 2.1E-38 309.7 15.7 241 18-281 3-259 (426)
42 cd06649 PKc_MEK2 Catalytic dom 100.0 1.1E-32 2.4E-37 301.6 23.8 238 16-281 2-302 (331)
43 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.7E-33 5.8E-38 306.5 17.9 233 20-281 2-258 (333)
44 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-32 2.5E-37 298.0 21.3 239 18-281 5-287 (309)
45 KOG0610 Putative serine/threon 100.0 8.7E-33 1.9E-37 293.1 19.3 245 19-281 77-393 (459)
46 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.1E-33 8.9E-38 306.5 17.5 241 20-281 2-286 (350)
47 cd07874 STKc_JNK3 Catalytic do 100.0 1.4E-32 3E-37 303.5 21.7 247 19-292 17-319 (355)
48 cd07853 STKc_NLK Catalytic dom 100.0 1.1E-32 2.3E-37 306.6 20.9 243 20-281 1-289 (372)
49 PHA03212 serine/threonine kina 100.0 1E-32 2.2E-37 309.1 20.6 234 15-281 88-377 (391)
50 cd05631 STKc_GRK4 Catalytic do 100.0 1.4E-32 3.1E-37 294.0 20.3 236 21-281 2-262 (285)
51 cd06650 PKc_MEK1 Catalytic dom 100.0 2.2E-32 4.7E-37 299.7 21.9 238 16-281 2-300 (333)
52 cd05599 STKc_NDR_like Catalyti 100.0 8.3E-33 1.8E-37 306.2 18.7 241 20-281 2-297 (364)
53 PTZ00267 NIMA-related protein 100.0 3.7E-32 8E-37 312.4 24.6 239 20-281 68-324 (478)
54 PTZ00036 glycogen synthase kin 100.0 1.3E-32 2.7E-37 313.0 20.5 244 17-281 64-352 (440)
55 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-32 2.8E-37 298.4 19.3 229 27-281 1-248 (312)
56 cd05589 STKc_PKN Catalytic dom 100.0 9.1E-33 2E-37 301.3 18.1 234 21-281 1-258 (324)
57 PTZ00426 cAMP-dependent protei 100.0 7.5E-33 1.6E-37 304.4 17.4 237 16-281 27-285 (340)
58 cd07875 STKc_JNK1 Catalytic do 100.0 2.8E-32 6.1E-37 302.2 22.1 246 19-291 24-325 (364)
59 cd07868 STKc_CDK8 Catalytic do 100.0 5E-32 1.1E-36 293.7 23.6 241 19-281 2-315 (317)
60 PLN00034 mitogen-activated pro 100.0 2.5E-32 5.5E-37 301.4 21.0 237 19-281 74-329 (353)
61 cd05595 STKc_PKB_beta Catalyti 100.0 1.4E-32 3E-37 299.9 18.7 230 26-281 2-252 (323)
62 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.9E-32 4E-37 300.9 19.8 240 19-281 15-299 (343)
63 KOG0201 Serine/threonine prote 100.0 2E-33 4.2E-38 300.0 11.6 238 17-281 11-264 (467)
64 PTZ00283 serine/threonine prot 100.0 6.4E-32 1.4E-36 311.3 25.0 252 17-281 30-298 (496)
65 cd05601 STKc_CRIK Catalytic do 100.0 9.8E-33 2.1E-37 301.5 16.7 243 20-281 2-264 (330)
66 KOG0662 Cyclin-dependent kinas 100.0 9.6E-33 2.1E-37 262.8 14.2 238 19-281 2-284 (292)
67 cd05593 STKc_PKB_gamma Catalyt 100.0 2.1E-32 4.6E-37 299.2 19.0 230 26-281 2-252 (328)
68 cd05596 STKc_ROCK Catalytic do 100.0 2E-32 4.4E-37 304.5 19.0 243 17-281 41-305 (370)
69 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7E-32 1.5E-36 290.6 22.6 240 17-281 4-287 (301)
70 cd05614 STKc_MSK2_N N-terminal 100.0 2E-32 4.4E-37 299.3 18.4 238 20-281 1-268 (332)
71 KOG0667 Dual-specificity tyros 100.0 1.8E-32 4E-37 306.5 18.1 193 20-242 187-389 (586)
72 cd08529 STKc_FA2-like Catalyti 100.0 1.3E-31 2.8E-36 280.1 23.1 238 20-281 1-254 (256)
73 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-31 2.4E-36 282.0 22.7 239 20-281 3-261 (263)
74 KOG0580 Serine/threonine prote 100.0 7.7E-33 1.7E-37 275.0 12.8 242 17-288 20-277 (281)
75 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-32 3E-37 300.0 16.1 231 26-281 2-253 (325)
76 cd05626 STKc_LATS2 Catalytic d 100.0 3.9E-32 8.4E-37 303.2 19.8 242 20-281 2-306 (381)
77 cd07839 STKc_CDK5 Catalytic do 100.0 4.9E-32 1.1E-36 288.5 19.5 238 20-281 1-282 (284)
78 cd08227 PK_STRAD_alpha Pseudok 100.0 1.3E-31 2.9E-36 292.3 23.3 244 23-281 2-308 (327)
79 cd05598 STKc_LATS Catalytic do 100.0 1.5E-32 3.2E-37 305.8 15.8 241 20-281 2-302 (376)
80 cd05102 PTKc_VEGFR3 Catalytic 100.0 6.8E-32 1.5E-36 295.7 20.8 244 16-280 4-330 (338)
81 cd05629 STKc_NDR_like_fungal C 100.0 3.4E-32 7.4E-37 303.1 18.5 241 20-281 2-306 (377)
82 cd05616 STKc_cPKC_beta Catalyt 100.0 6.3E-32 1.4E-36 294.5 19.9 236 20-281 1-258 (323)
83 cd07832 STKc_CCRK Catalytic do 100.0 2.2E-31 4.7E-36 283.3 23.5 239 20-281 1-283 (286)
84 cd05628 STKc_NDR1 Catalytic do 100.0 6.7E-32 1.4E-36 299.3 20.3 242 20-281 2-294 (363)
85 KOG0032 Ca2+/calmodulin-depend 100.0 1.2E-31 2.7E-36 296.3 21.9 241 18-290 34-299 (382)
86 cd05575 STKc_SGK Catalytic dom 100.0 5.8E-32 1.3E-36 294.8 18.9 230 26-281 2-252 (323)
87 cd05621 STKc_ROCK2 Catalytic d 100.0 6.4E-32 1.4E-36 300.5 19.5 243 17-281 41-305 (370)
88 cd05625 STKc_LATS1 Catalytic d 100.0 5E-32 1.1E-36 302.3 18.5 241 20-281 2-306 (382)
89 cd05584 STKc_p70S6K Catalytic 100.0 8.1E-32 1.8E-36 293.8 19.6 231 25-281 2-257 (323)
90 KOG0694 Serine/threonine prote 100.0 2.8E-32 6.1E-37 304.9 16.0 246 16-296 365-632 (694)
91 cd05590 STKc_nPKC_eta Catalyti 100.0 6.5E-32 1.4E-36 294.3 18.5 230 26-281 2-254 (320)
92 KOG0596 Dual specificity; seri 100.0 5.3E-32 1.1E-36 294.8 17.4 247 16-281 358-628 (677)
93 PF00069 Pkinase: Protein kina 100.0 4.5E-32 9.8E-37 283.9 16.2 236 21-281 1-258 (260)
94 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-31 2.5E-36 292.5 20.0 236 20-281 1-258 (324)
95 cd07860 STKc_CDK2_3 Catalytic 100.0 1.8E-31 3.9E-36 284.1 20.8 239 20-281 1-282 (284)
96 cd05591 STKc_nPKC_epsilon Cata 100.0 9E-32 2E-36 293.0 18.9 231 25-281 1-255 (321)
97 KOG0599 Phosphorylase kinase g 100.0 2.2E-32 4.7E-37 275.3 12.7 241 20-281 18-284 (411)
98 cd08223 STKc_Nek4 Catalytic do 100.0 4.6E-31 1E-35 276.3 23.4 239 20-281 1-255 (257)
99 cd05608 STKc_GRK1 Catalytic do 100.0 2.5E-31 5.5E-36 283.6 21.6 232 27-281 1-258 (280)
100 KOG1989 ARK protein kinase fam 100.0 9.3E-32 2E-36 309.5 18.8 253 18-281 36-308 (738)
101 cd05622 STKc_ROCK1 Catalytic d 100.0 1.4E-31 3.1E-36 297.8 19.8 244 16-281 40-305 (371)
102 cd07843 STKc_CDC2L1 Catalytic 100.0 2.7E-31 5.8E-36 284.6 21.2 241 19-281 5-291 (293)
103 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-31 2.8E-36 293.1 19.1 230 26-281 2-263 (329)
104 cd05582 STKc_RSK_N N-terminal 100.0 3.8E-32 8.2E-37 295.5 14.8 231 25-281 2-255 (318)
105 cd07844 STKc_PCTAIRE_like Cata 100.0 3.8E-31 8.3E-36 282.9 22.3 239 18-281 4-289 (291)
106 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.6E-31 1.2E-35 276.8 23.1 243 20-281 2-265 (267)
107 PTZ00284 protein kinase; Provi 100.0 1.6E-31 3.6E-36 306.2 20.6 241 18-292 128-446 (467)
108 KOG4717 Serine/threonine prote 100.0 6.5E-32 1.4E-36 290.4 15.9 242 20-290 19-276 (864)
109 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.1E-31 6.7E-36 282.9 21.1 243 20-281 2-263 (286)
110 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-31 3.3E-36 292.6 19.1 230 26-281 2-263 (329)
111 cd07841 STKc_CDK7 Catalytic do 100.0 3.5E-31 7.6E-36 284.1 21.5 238 20-281 1-283 (298)
112 cd07845 STKc_CDK10 Catalytic d 100.0 3.6E-31 7.7E-36 286.2 21.6 243 17-281 5-291 (309)
113 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.8E-31 1E-35 278.1 21.8 242 20-281 1-265 (267)
114 cd06615 PKc_MEK Catalytic doma 100.0 5.4E-31 1.2E-35 285.1 22.7 234 20-281 2-288 (308)
115 cd05570 STKc_PKC Catalytic dom 100.0 1.7E-31 3.7E-36 290.6 18.8 230 26-281 2-253 (318)
116 cd07847 STKc_CDKL1_4 Catalytic 100.0 4E-31 8.7E-36 281.3 21.2 237 20-281 2-284 (286)
117 cd07849 STKc_ERK1_2_like Catal 100.0 3.2E-31 6.9E-36 290.4 20.8 252 19-293 5-301 (336)
118 cd05605 STKc_GRK4_like Catalyt 100.0 3.8E-31 8.3E-36 282.9 20.8 237 20-281 1-262 (285)
119 cd06646 STKc_MAP4K5 Catalytic 100.0 7.1E-31 1.5E-35 277.0 22.5 240 17-281 7-266 (267)
120 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-31 2.3E-36 297.3 16.9 241 20-281 2-294 (360)
121 cd08217 STKc_Nek2 Catalytic do 100.0 9.6E-31 2.1E-35 274.0 23.2 241 20-281 1-263 (265)
122 KOG4721 Serine/threonine prote 100.0 7E-32 1.5E-36 293.2 14.8 227 26-297 131-374 (904)
123 cd07850 STKc_JNK Catalytic dom 100.0 4E-31 8.6E-36 291.8 21.1 248 19-293 16-320 (353)
124 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.4E-31 1.8E-35 278.6 22.7 242 20-281 2-262 (283)
125 KOG0586 Serine/threonine prote 100.0 1.5E-31 3.4E-36 296.2 17.5 240 19-288 56-310 (596)
126 cd07867 STKc_CDC2L6 Catalytic 100.0 6.9E-31 1.5E-35 284.4 22.3 237 24-281 6-315 (317)
127 cd06609 STKc_MST3_like Catalyt 100.0 1.1E-30 2.3E-35 276.9 23.1 242 20-293 2-260 (274)
128 cd05620 STKc_nPKC_delta Cataly 100.0 3.4E-31 7.5E-36 288.0 19.6 231 25-281 1-249 (316)
129 cd05592 STKc_nPKC_theta_delta 100.0 3.3E-31 7.1E-36 288.2 19.3 230 26-281 2-249 (316)
130 cd05597 STKc_DMPK_like Catalyt 100.0 4.4E-31 9.6E-36 289.1 20.5 243 20-281 2-267 (331)
131 cd06655 STKc_PAK2 Catalytic do 100.0 8.8E-31 1.9E-35 282.0 22.5 248 2-281 5-270 (296)
132 cd08218 STKc_Nek1 Catalytic do 100.0 8.8E-31 1.9E-35 274.3 21.8 238 20-281 1-254 (256)
133 cd07836 STKc_Pho85 Catalytic d 100.0 8.8E-31 1.9E-35 278.6 22.1 239 20-281 1-282 (284)
134 PHA03209 serine/threonine kina 100.0 5.4E-31 1.2E-35 291.5 21.1 231 17-281 64-352 (357)
135 cd07855 STKc_ERK5 Catalytic do 100.0 3.2E-31 6.9E-36 290.2 19.0 246 19-281 5-295 (334)
136 cd05602 STKc_SGK1 Catalytic do 100.0 2.3E-31 5E-36 290.3 17.7 230 26-281 2-252 (325)
137 cd05603 STKc_SGK2 Catalytic do 100.0 3.1E-31 6.8E-36 288.7 18.5 230 26-281 2-252 (321)
138 cd07842 STKc_CDK8_like Catalyt 100.0 9.5E-31 2.1E-35 282.7 22.0 245 20-281 1-314 (316)
139 KOG0197 Tyrosine kinases [Sign 100.0 2.6E-31 5.6E-36 291.6 17.7 232 21-279 208-456 (468)
140 cd08221 STKc_Nek9 Catalytic do 100.0 2.2E-30 4.8E-35 271.3 23.8 238 20-281 1-254 (256)
141 cd05096 PTKc_DDR1 Catalytic do 100.0 1E-30 2.2E-35 282.0 21.6 241 17-279 3-300 (304)
142 cd05607 STKc_GRK7 Catalytic do 100.0 1.2E-30 2.5E-35 278.0 21.8 230 27-281 1-255 (277)
143 PHA03207 serine/threonine kina 100.0 8E-31 1.7E-35 293.9 21.5 233 18-281 91-376 (392)
144 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.4E-30 3E-35 275.5 22.2 241 19-281 1-270 (272)
145 cd05574 STKc_phototropin_like 100.0 1.4E-30 3E-35 282.3 22.5 244 20-281 2-290 (316)
146 cd06645 STKc_MAP4K3 Catalytic 100.0 1E-30 2.2E-35 275.9 20.9 240 17-281 7-266 (267)
147 cd05604 STKc_SGK3 Catalytic do 100.0 2.7E-31 5.8E-36 289.8 17.0 230 26-281 2-252 (325)
148 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-30 3E-35 278.9 22.1 245 20-281 2-292 (295)
149 PLN00009 cyclin-dependent kina 100.0 1.4E-30 3E-35 279.2 22.1 239 20-281 3-285 (294)
150 cd07865 STKc_CDK9 Catalytic do 100.0 1.1E-30 2.4E-35 281.2 21.2 251 19-281 12-308 (310)
151 PHA02988 hypothetical protein; 100.0 9.6E-31 2.1E-35 280.1 20.6 238 20-280 19-275 (283)
152 cd07835 STKc_CDK1_like Catalyt 100.0 1.3E-30 2.8E-35 277.4 21.2 238 21-281 1-281 (283)
153 cd05580 STKc_PKA Catalytic dom 100.0 1.3E-30 2.9E-35 279.2 21.3 233 20-281 2-255 (290)
154 cd06612 STKc_MST1_2 Catalytic 100.0 2E-30 4.3E-35 271.1 22.0 235 18-281 2-254 (256)
155 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.9E-31 1.7E-35 279.3 19.3 237 20-281 2-284 (286)
156 cd08220 STKc_Nek8 Catalytic do 100.0 2.4E-30 5.3E-35 270.4 22.6 237 20-281 1-254 (256)
157 cd05048 PTKc_Ror Catalytic Dom 100.0 1.6E-30 3.4E-35 276.7 21.3 241 19-281 5-280 (283)
158 cd06613 STKc_MAP4K3_like Catal 100.0 2.1E-30 4.5E-35 271.9 21.8 240 18-281 2-261 (262)
159 cd07831 STKc_MOK Catalytic dom 100.0 2.5E-30 5.3E-35 274.6 22.6 236 21-281 1-280 (282)
160 cd06651 STKc_MEKK3 Catalytic d 100.0 2.3E-30 4.9E-35 273.5 22.1 241 19-281 2-262 (266)
161 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.7E-30 5.9E-35 276.5 23.0 238 19-281 5-289 (291)
162 cd07833 STKc_CDKL Catalytic do 100.0 2E-30 4.3E-35 276.2 21.7 239 20-281 2-286 (288)
163 cd06656 STKc_PAK3 Catalytic do 100.0 2.5E-30 5.3E-35 278.5 22.6 236 17-281 17-270 (297)
164 cd05619 STKc_nPKC_theta Cataly 100.0 8.8E-31 1.9E-35 284.9 19.3 230 26-281 2-249 (316)
165 cd06644 STKc_STK10_LOK Catalyt 100.0 4.8E-30 1E-34 274.9 24.8 243 17-281 10-270 (292)
166 PHA03211 serine/threonine kina 100.0 1.4E-30 3.1E-35 296.5 21.9 234 17-281 167-456 (461)
167 KOG4236 Serine/threonine prote 100.0 9.9E-32 2.1E-36 289.6 11.4 237 25-290 570-825 (888)
168 cd07866 STKc_BUR1 Catalytic do 100.0 1.6E-30 3.5E-35 280.0 20.9 254 18-281 7-309 (311)
169 cd06654 STKc_PAK1 Catalytic do 100.0 2.2E-30 4.7E-35 278.8 21.9 236 17-281 18-271 (296)
170 cd06630 STKc_MEKK1 Catalytic d 100.0 2.3E-30 5E-35 272.8 21.5 240 20-281 1-265 (268)
171 cd05578 STKc_Yank1 Catalytic d 100.0 8.9E-31 1.9E-35 274.8 18.3 235 20-281 1-256 (258)
172 KOG0666 Cyclin C-dependent kin 100.0 1.9E-31 4.1E-36 272.9 12.5 244 19-281 24-338 (438)
173 cd06605 PKc_MAPKK Catalytic do 100.0 1E-30 2.3E-35 274.9 18.7 235 20-281 2-258 (265)
174 cd06619 PKc_MKK5 Catalytic dom 100.0 4.5E-30 9.7E-35 273.5 23.6 229 20-281 2-254 (279)
175 cd08219 STKc_Nek3 Catalytic do 100.0 2.7E-30 5.9E-35 270.7 21.6 236 20-280 1-252 (255)
176 cd07864 STKc_CDK12 Catalytic d 100.0 2.1E-30 4.6E-35 278.4 21.2 249 18-281 6-300 (302)
177 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.4E-30 3E-35 284.6 20.1 230 26-281 2-261 (327)
178 cd05586 STKc_Sck1_like Catalyt 100.0 3E-31 6.5E-36 289.9 14.8 230 27-281 1-254 (330)
179 PTZ00266 NIMA-related protein 100.0 1.7E-30 3.6E-35 310.7 22.4 247 16-281 10-296 (1021)
180 cd05052 PTKc_Abl Catalytic dom 100.0 2.6E-30 5.6E-35 272.5 21.4 238 17-280 4-258 (263)
181 cd08228 STKc_Nek6 Catalytic do 100.0 3.1E-30 6.6E-35 271.9 21.5 239 20-281 3-262 (267)
182 cd05084 PTKc_Fes Catalytic dom 100.0 3.9E-30 8.4E-35 269.0 21.6 232 25-280 1-249 (252)
183 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-30 3.1E-35 284.1 19.1 236 20-281 1-258 (323)
184 PHA03210 serine/threonine kina 100.0 1.7E-30 3.7E-35 300.0 20.7 257 19-305 148-471 (501)
185 cd06608 STKc_myosinIII_like Ca 100.0 5.1E-30 1.1E-34 270.3 22.5 250 17-281 4-273 (275)
186 cd06643 STKc_SLK Catalytic dom 100.0 6.1E-30 1.3E-34 272.5 23.2 239 21-281 7-263 (282)
187 cd06623 PKc_MAPKK_plant_like C 100.0 5.3E-30 1.1E-34 268.9 22.3 236 20-281 2-257 (264)
188 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.1E-30 6.6E-35 272.9 20.6 239 17-280 3-261 (266)
189 cd05630 STKc_GRK6 Catalytic do 100.0 4.1E-30 8.9E-35 275.1 21.8 236 21-281 2-262 (285)
190 cd06637 STKc_TNIK Catalytic do 100.0 5E-30 1.1E-34 271.1 21.9 248 18-281 5-270 (272)
191 cd06631 STKc_YSK4 Catalytic do 100.0 5.1E-30 1.1E-34 270.2 21.9 241 20-281 1-263 (265)
192 KOG2345 Serine/threonine prote 100.0 8.3E-31 1.8E-35 261.6 14.8 256 16-281 18-297 (302)
193 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-30 4.4E-35 283.9 19.4 243 20-281 2-267 (332)
194 cd06611 STKc_SLK_like Catalyti 100.0 5.1E-30 1.1E-34 272.6 21.8 242 18-281 4-263 (280)
195 cd05106 PTKc_CSF-1R Catalytic 100.0 3.2E-30 7E-35 287.2 21.1 242 17-280 36-368 (374)
196 cd05572 STKc_cGK_PKG Catalytic 100.0 5E-30 1.1E-34 269.8 21.4 228 27-281 1-253 (262)
197 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-29 2.5E-34 274.3 24.8 239 17-281 13-268 (307)
198 cd06626 STKc_MEKK4 Catalytic d 100.0 8.3E-30 1.8E-34 267.7 23.0 243 20-281 1-262 (264)
199 cd06652 STKc_MEKK2 Catalytic d 100.0 5.3E-30 1.1E-34 270.3 21.5 241 19-281 2-262 (265)
200 cd08225 STKc_Nek5 Catalytic do 100.0 4.1E-30 8.9E-35 268.9 20.3 238 20-281 1-255 (257)
201 cd06640 STKc_MST4 Catalytic do 100.0 5.9E-30 1.3E-34 272.1 21.6 235 19-281 4-254 (277)
202 cd05624 STKc_MRCK_beta Catalyt 100.0 2.6E-30 5.6E-35 283.0 19.3 243 20-281 2-267 (331)
203 cd07852 STKc_MAPK15 Catalytic 100.0 4.1E-30 8.8E-35 281.7 20.8 245 18-281 6-296 (337)
204 cd06606 STKc_MAPKKK Catalytic 100.0 1E-29 2.2E-34 264.6 22.8 240 20-281 1-258 (260)
205 cd06917 STKc_NAK1_like Catalyt 100.0 7.1E-30 1.5E-34 270.9 21.9 235 20-281 2-256 (277)
206 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.2E-29 2.5E-34 267.0 23.2 238 20-280 3-261 (267)
207 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.9E-30 6.4E-35 283.1 19.2 243 19-281 5-292 (337)
208 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.1E-30 4.6E-35 275.3 17.4 234 20-281 5-254 (277)
209 cd05104 PTKc_Kit Catalytic dom 100.0 4.4E-30 9.6E-35 286.2 20.7 241 18-280 34-370 (375)
210 cd05632 STKc_GRK5 Catalytic do 100.0 7.5E-30 1.6E-34 272.9 21.6 236 21-281 2-262 (285)
211 cd06616 PKc_MKK4 Catalytic dom 100.0 7.8E-30 1.7E-34 272.3 21.7 241 20-281 5-268 (288)
212 cd08226 PK_STRAD_beta Pseudoki 100.0 5.7E-30 1.2E-34 279.6 20.7 244 24-281 3-309 (328)
213 cd05049 PTKc_Trk Catalytic dom 100.0 7.4E-30 1.6E-34 270.9 21.0 241 18-280 4-277 (280)
214 cd05035 PTKc_Axl_like Catalyti 100.0 1.3E-29 2.8E-34 267.6 22.7 246 21-281 1-269 (273)
215 cd07879 STKc_p38delta_MAPK13 C 100.0 4.4E-30 9.6E-35 282.3 19.9 239 19-281 15-298 (342)
216 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-29 2.6E-34 265.2 21.7 236 20-281 1-256 (258)
217 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-29 2.8E-34 270.2 22.3 241 19-281 5-280 (283)
218 cd06627 STKc_Cdc7_like Catalyt 100.0 2E-29 4.3E-34 262.6 23.2 236 20-281 1-252 (254)
219 cd08229 STKc_Nek7 Catalytic do 100.0 9E-30 2E-34 268.3 20.7 238 20-280 3-261 (267)
220 KOG0193 Serine/threonine prote 100.0 1.6E-30 3.6E-35 286.4 15.4 238 19-280 392-649 (678)
221 cd05108 PTKc_EGFR Catalytic do 100.0 9.2E-30 2E-34 276.4 21.2 240 16-280 4-264 (316)
222 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-29 2.9E-34 277.1 22.6 236 18-281 9-289 (328)
223 cd05122 PKc_STE Catalytic doma 100.0 2.2E-29 4.8E-34 260.9 23.0 234 20-281 1-252 (253)
224 cd07840 STKc_CDK9_like Catalyt 100.0 1E-29 2.2E-34 270.0 21.1 240 21-281 1-285 (287)
225 cd07829 STKc_CDK_like Catalyti 100.0 1E-29 2.3E-34 269.5 21.0 237 21-281 1-280 (282)
226 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.5E-30 1.4E-34 268.5 19.1 236 18-280 5-257 (261)
227 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-29 2.3E-34 268.1 20.7 236 17-280 4-256 (262)
228 cd07834 STKc_MAPK Catalytic do 100.0 5.8E-30 1.3E-34 279.2 19.2 245 20-281 1-290 (330)
229 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.5E-29 3.2E-34 269.3 21.9 249 17-281 14-280 (282)
230 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.7E-29 5.9E-34 268.6 23.9 238 20-281 2-267 (287)
231 cd06647 STKc_PAK_I Catalytic d 100.0 9.8E-30 2.1E-34 273.3 20.5 236 17-281 17-270 (293)
232 KOG4279 Serine/threonine prote 100.0 6.8E-31 1.5E-35 290.3 11.3 242 17-281 568-833 (1226)
233 cd06639 STKc_myosinIIIB Cataly 100.0 2.8E-29 6.1E-34 268.6 23.6 249 17-281 20-288 (291)
234 PF07714 Pkinase_Tyr: Protein 100.0 2.6E-30 5.6E-35 272.8 15.3 235 22-279 2-257 (259)
235 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.8E-29 3.9E-34 264.8 21.5 234 19-280 4-254 (256)
236 cd00192 PTKc Catalytic domain 100.0 2.4E-29 5.2E-34 262.7 22.3 234 25-280 1-260 (262)
237 cd05075 PTKc_Axl Catalytic dom 100.0 2.5E-29 5.5E-34 265.7 22.7 245 21-280 1-267 (272)
238 cd08530 STKc_CNK2-like Catalyt 100.0 1.6E-29 3.5E-34 263.9 20.8 237 20-281 1-254 (256)
239 cd05059 PTKc_Tec_like Catalyti 100.0 2.1E-29 4.6E-34 264.5 21.7 234 19-280 4-254 (256)
240 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.2E-29 2.5E-34 270.8 19.9 237 17-281 3-267 (284)
241 cd07838 STKc_CDK4_6_like Catal 100.0 2.3E-29 5.1E-34 267.6 22.1 241 21-281 1-285 (287)
242 cd05609 STKc_MAST Catalytic do 100.0 2.3E-29 5E-34 271.7 22.2 242 20-281 2-274 (305)
243 cd05032 PTKc_InsR_like Catalyt 100.0 1.7E-29 3.7E-34 267.7 20.9 243 16-280 3-274 (277)
244 cd05118 STKc_CMGC Catalytic do 100.0 1.2E-29 2.7E-34 269.1 19.8 237 21-281 1-281 (283)
245 cd05072 PTKc_Lyn Catalytic dom 100.0 1.8E-29 3.8E-34 265.5 20.6 236 17-279 4-256 (261)
246 cd05089 PTKc_Tie1 Catalytic do 100.0 1.8E-29 3.9E-34 271.5 21.1 236 20-280 3-271 (297)
247 cd05577 STKc_GRK Catalytic dom 100.0 2.5E-29 5.3E-34 267.4 21.8 230 27-281 1-255 (277)
248 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.2E-29 4.7E-34 267.8 21.4 242 18-281 5-275 (277)
249 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.8E-29 3.9E-34 277.7 21.4 240 19-281 15-299 (343)
250 cd05062 PTKc_IGF-1R Catalytic 100.0 2.1E-29 4.6E-34 267.6 21.2 241 18-280 5-274 (277)
251 cd05082 PTKc_Csk Catalytic dom 100.0 2.6E-29 5.5E-34 263.7 21.6 232 17-280 4-252 (256)
252 cd05060 PTKc_Syk_like Catalyti 100.0 3.2E-29 7E-34 263.1 22.3 231 25-280 1-251 (257)
253 cd05093 PTKc_TrkB Catalytic do 100.0 2.6E-29 5.7E-34 268.8 21.9 241 16-279 2-274 (288)
254 cd05116 PTKc_Syk Catalytic dom 100.0 2.1E-29 4.7E-34 264.6 20.8 232 26-281 2-252 (257)
255 cd07851 STKc_p38 Catalytic dom 100.0 7.3E-30 1.6E-34 280.7 18.0 248 18-292 14-306 (343)
256 cd05053 PTKc_FGFR Catalytic do 100.0 1.6E-29 3.5E-34 270.6 20.2 244 16-281 9-288 (293)
257 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.1E-29 4.6E-34 264.9 20.8 235 18-280 3-254 (256)
258 cd05091 PTKc_Ror2 Catalytic do 100.0 1.8E-29 3.9E-34 268.9 20.3 239 20-280 6-279 (283)
259 PRK13184 pknD serine/threonine 100.0 2.3E-29 5.1E-34 299.8 23.4 243 19-278 2-283 (932)
260 cd08216 PK_STRAD Pseudokinase 100.0 2.2E-29 4.7E-34 272.5 21.1 245 20-281 3-296 (314)
261 cd06659 STKc_PAK6 Catalytic do 100.0 1.8E-29 3.9E-34 271.9 20.4 234 19-281 21-272 (297)
262 cd05033 PTKc_EphR Catalytic do 100.0 3.6E-29 7.8E-34 264.1 22.2 239 19-281 4-262 (266)
263 cd05581 STKc_PDK1 Catalytic do 100.0 1.8E-29 3.9E-34 267.2 19.8 242 20-281 2-278 (280)
264 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.9E-29 4.1E-34 277.4 20.6 247 18-281 4-301 (342)
265 cd06614 STKc_PAK Catalytic dom 100.0 4.8E-29 1E-33 266.2 22.8 237 17-281 17-271 (286)
266 KOG1035 eIF-2alpha kinase GCN2 100.0 1.7E-29 3.7E-34 295.7 20.9 249 20-281 480-872 (1351)
267 cd06638 STKc_myosinIIIA Cataly 100.0 6.1E-29 1.3E-33 265.0 23.5 249 17-281 16-284 (286)
268 cd05056 PTKc_FAK Catalytic dom 100.0 3.2E-29 7E-34 265.0 21.1 238 17-280 4-261 (270)
269 KOG0604 MAP kinase-activated p 100.0 2.1E-30 4.6E-35 264.2 11.5 240 20-291 62-329 (400)
270 cd06641 STKc_MST3 Catalytic do 100.0 4E-29 8.6E-34 265.8 21.8 233 21-281 6-254 (277)
271 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.4E-29 7.3E-34 281.2 22.2 243 16-280 34-393 (400)
272 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.4E-29 7.5E-34 275.7 21.5 246 19-291 17-307 (345)
273 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.2E-29 1.1E-33 262.8 22.0 241 19-281 2-262 (264)
274 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.3E-29 1.4E-33 264.9 22.8 237 21-280 6-277 (283)
275 cd08215 STKc_Nek Catalytic dom 100.0 6.3E-29 1.4E-33 258.9 22.1 239 20-281 1-256 (258)
276 cd06624 STKc_ASK Catalytic dom 100.0 5.9E-29 1.3E-33 262.7 22.2 234 25-281 14-266 (268)
277 cd05088 PTKc_Tie2 Catalytic do 100.0 2.9E-29 6.2E-34 271.0 20.2 239 18-281 6-277 (303)
278 cd05054 PTKc_VEGFR Catalytic d 100.0 2.7E-29 5.9E-34 275.8 20.3 244 17-281 5-330 (337)
279 cd05068 PTKc_Frk_like Catalyti 100.0 5.8E-29 1.3E-33 261.7 21.9 236 18-280 5-257 (261)
280 cd07857 STKc_MPK1 Catalytic do 100.0 3.3E-29 7.1E-34 274.1 20.8 250 20-290 1-298 (332)
281 cd05045 PTKc_RET Catalytic dom 100.0 5.7E-29 1.2E-33 266.3 22.1 239 20-280 1-282 (290)
282 cd05040 PTKc_Ack_like Catalyti 100.0 6.4E-29 1.4E-33 260.3 22.0 232 25-280 1-254 (257)
283 cd05579 STKc_MAST_like Catalyt 100.0 4.5E-29 9.6E-34 261.4 20.5 235 27-281 1-258 (265)
284 cd05034 PTKc_Src_like Catalyti 100.0 6.6E-29 1.4E-33 260.9 21.4 237 16-279 3-256 (261)
285 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.9E-29 1.7E-33 264.0 22.2 241 18-280 3-279 (284)
286 cd06633 STKc_TAO3 Catalytic do 100.0 1.3E-28 2.8E-33 267.3 24.3 235 21-281 23-274 (313)
287 cd05051 PTKc_DDR Catalytic dom 100.0 8.4E-29 1.8E-33 265.2 22.5 242 17-280 3-293 (296)
288 cd05092 PTKc_TrkA Catalytic do 100.0 7.9E-29 1.7E-33 264.0 22.1 241 17-280 3-277 (280)
289 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.1E-29 1.5E-33 261.0 21.3 237 16-280 3-256 (260)
290 cd05043 PTK_Ryk Pseudokinase d 100.0 5.5E-29 1.2E-33 264.7 20.8 243 17-280 4-272 (280)
291 PTZ00024 cyclin-dependent prot 100.0 5.7E-29 1.2E-33 272.2 21.3 245 18-281 7-314 (335)
292 cd05039 PTKc_Csk_like Catalyti 100.0 9.4E-29 2E-33 259.2 21.9 232 17-280 4-252 (256)
293 cd06618 PKc_MKK7 Catalytic dom 100.0 7.5E-29 1.6E-33 266.4 21.6 245 15-281 11-274 (296)
294 cd05099 PTKc_FGFR4 Catalytic d 100.0 8.1E-29 1.8E-33 268.7 21.9 242 17-280 10-289 (314)
295 cd05097 PTKc_DDR_like Catalyti 100.0 7.7E-29 1.7E-33 266.2 21.3 242 17-280 3-292 (295)
296 cd06635 STKc_TAO1 Catalytic do 100.0 2.2E-28 4.9E-33 265.7 25.2 237 19-281 25-278 (317)
297 cd05069 PTKc_Yes Catalytic dom 100.0 7.4E-29 1.6E-33 261.0 20.7 235 17-279 4-255 (260)
298 smart00219 TyrKc Tyrosine kina 100.0 1.2E-28 2.5E-33 257.5 22.0 235 21-279 1-256 (258)
299 KOG0577 Serine/threonine prote 100.0 5.6E-30 1.2E-34 279.3 12.2 236 20-281 27-279 (948)
300 cd05109 PTKc_HER2 Catalytic do 100.0 1.1E-28 2.3E-33 262.5 21.9 239 17-280 5-264 (279)
301 cd07830 STKc_MAK_like Catalyti 100.0 7.6E-29 1.6E-33 263.6 20.7 236 21-281 1-281 (283)
302 cd05066 PTKc_EphR_A Catalytic 100.0 9.2E-29 2E-33 261.3 21.2 239 19-280 4-262 (267)
303 cd06648 STKc_PAK_II Catalytic 100.0 1.4E-28 3E-33 263.2 22.6 233 20-281 20-270 (285)
304 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 9.4E-29 2E-33 260.0 20.9 235 17-279 4-255 (260)
305 cd06658 STKc_PAK5 Catalytic do 100.0 4E-29 8.6E-34 268.6 18.4 234 19-281 22-273 (292)
306 cd05047 PTKc_Tie Catalytic dom 100.0 1.1E-28 2.4E-33 261.4 21.4 230 26-280 2-264 (270)
307 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-28 2.9E-33 259.8 21.8 239 19-280 5-263 (268)
308 cd05046 PTK_CCK4 Pseudokinase 100.0 9.6E-29 2.1E-33 261.9 20.8 241 17-280 3-272 (275)
309 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 9.8E-29 2.1E-33 263.7 21.0 240 20-280 5-279 (284)
310 cd05101 PTKc_FGFR2 Catalytic d 100.0 8.5E-29 1.8E-33 267.0 20.7 244 16-281 12-293 (304)
311 cd05061 PTKc_InsR Catalytic do 100.0 1.3E-28 2.8E-33 263.5 21.9 241 18-280 5-274 (288)
312 KOG0574 STE20-like serine/thre 100.0 7E-31 1.5E-35 267.0 4.0 232 20-281 34-284 (502)
313 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-28 2.3E-33 264.5 21.2 240 18-280 4-278 (291)
314 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.5E-29 2.1E-33 267.2 20.8 243 17-281 16-296 (307)
315 cd06634 STKc_TAO2 Catalytic do 100.0 2E-28 4.4E-33 265.0 23.1 239 17-281 13-268 (308)
316 KOG0584 Serine/threonine prote 100.0 1.3E-29 2.8E-34 281.2 13.9 237 18-281 38-297 (632)
317 cd05041 PTKc_Fes_like Catalyti 100.0 2.2E-28 4.9E-33 255.3 22.5 231 25-280 1-248 (251)
318 cd05085 PTKc_Fer Catalytic dom 100.0 2.3E-28 4.9E-33 255.1 22.5 230 25-280 1-247 (250)
319 cd05065 PTKc_EphR_B Catalytic 100.0 1.5E-28 3.2E-33 259.9 21.0 241 19-280 4-264 (269)
320 cd05095 PTKc_DDR2 Catalytic do 100.0 1.6E-28 3.5E-33 263.8 21.7 242 17-280 3-293 (296)
321 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-28 2.7E-33 258.8 20.3 227 25-281 2-252 (260)
322 cd05050 PTKc_Musk Catalytic do 100.0 1.6E-28 3.4E-33 262.4 21.4 242 17-280 3-285 (288)
323 cd05633 STKc_GRK3 Catalytic do 100.0 1.6E-28 3.5E-33 261.9 21.3 228 27-281 2-256 (279)
324 cd05057 PTKc_EGFR_like Catalyt 100.0 2.4E-28 5.2E-33 259.8 22.3 239 17-280 5-264 (279)
325 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.4E-28 3.1E-33 269.3 21.0 244 16-281 9-290 (334)
326 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-28 3.8E-33 255.5 20.6 229 27-281 1-248 (250)
327 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.5E-28 3.3E-33 260.9 20.4 241 19-280 4-279 (284)
328 KOG0607 MAP kinase-interacting 100.0 1.4E-29 3E-34 259.9 11.7 242 21-281 79-362 (463)
329 cd05055 PTKc_PDGFR Catalytic d 100.0 1.8E-28 4E-33 264.7 21.0 242 16-280 32-297 (302)
330 KOG1240 Protein kinase contain 100.0 1.2E-28 2.7E-33 285.3 20.8 472 20-510 24-637 (1431)
331 cd05111 PTK_HER3 Pseudokinase 100.0 3.2E-28 6.9E-33 259.4 22.3 238 18-280 6-264 (279)
332 KOG0579 Ste20-like serine/thre 100.0 8.8E-30 1.9E-34 278.9 10.4 239 21-281 34-290 (1187)
333 KOG0669 Cyclin T-dependent kin 100.0 1.5E-30 3.3E-35 259.5 3.9 250 20-281 18-316 (376)
334 cd05115 PTKc_Zap-70 Catalytic 100.0 3.2E-28 7E-33 256.2 21.8 232 26-281 2-252 (257)
335 cd05613 STKc_MSK1_N N-terminal 100.0 2.3E-28 5.1E-33 261.4 20.9 239 20-281 1-269 (290)
336 cd05058 PTKc_Met_Ron Catalytic 100.0 3.2E-28 7E-33 255.8 21.1 235 25-280 1-255 (262)
337 cd05112 PTKc_Itk Catalytic dom 100.0 3.9E-28 8.5E-33 254.2 21.5 233 20-280 5-254 (256)
338 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.6E-28 1E-32 256.2 21.9 245 21-280 1-268 (273)
339 cd05073 PTKc_Hck Catalytic dom 100.0 4.9E-28 1.1E-32 254.7 21.6 235 17-279 4-255 (260)
340 cd05083 PTKc_Chk Catalytic dom 100.0 3E-28 6.4E-33 255.3 19.8 228 19-280 6-250 (254)
341 cd08528 STKc_Nek10 Catalytic d 100.0 7E-28 1.5E-32 254.4 22.7 238 20-280 1-266 (269)
342 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.5E-28 7.6E-33 267.5 20.9 243 18-281 6-336 (343)
343 PHA03390 pk1 serine/threonine- 100.0 4.8E-28 1E-32 256.6 21.1 225 20-281 15-263 (267)
344 cd05606 STKc_beta_ARK Catalyti 100.0 8.3E-28 1.8E-32 256.2 23.0 228 27-281 2-256 (278)
345 cd06657 STKc_PAK4 Catalytic do 100.0 3.8E-28 8.2E-33 261.1 20.4 232 21-281 22-271 (292)
346 cd05044 PTKc_c-ros Catalytic d 100.0 3.2E-28 7E-33 256.8 19.5 233 26-280 2-266 (269)
347 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.7E-28 3.8E-33 258.1 17.0 226 25-280 1-256 (258)
348 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.8E-28 1.3E-32 255.2 21.0 226 25-280 1-260 (262)
349 cd05042 PTKc_Aatyk Catalytic d 100.0 7.7E-28 1.7E-32 254.4 21.6 239 25-280 1-266 (269)
350 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.1E-28 1.3E-32 271.1 21.5 243 16-280 34-395 (401)
351 cd05110 PTKc_HER4 Catalytic do 100.0 1.2E-27 2.5E-32 258.4 21.3 239 18-281 6-265 (303)
352 KOG0983 Mitogen-activated prot 100.0 2.1E-28 4.6E-33 246.8 13.8 238 21-281 94-350 (391)
353 cd08222 STKc_Nek11 Catalytic d 100.0 8.1E-28 1.8E-32 252.7 18.9 238 20-281 1-258 (260)
354 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-29 2.9E-34 297.8 5.2 245 18-281 1234-1495(1509)
355 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3E-27 6.5E-32 250.0 22.7 238 26-280 2-266 (269)
356 KOG0690 Serine/threonine prote 100.0 8E-29 1.7E-33 254.5 9.9 240 16-281 165-425 (516)
357 cd05583 STKc_MSK_N N-terminal 100.0 1.2E-27 2.6E-32 255.6 19.1 239 20-281 1-267 (288)
358 PHA02882 putative serine/threo 100.0 7.1E-27 1.5E-31 251.3 24.0 248 16-279 9-291 (294)
359 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.2E-27 7E-32 247.3 20.3 225 25-280 1-257 (259)
360 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.3E-27 9.2E-32 250.4 20.8 225 26-280 2-272 (274)
361 cd05086 PTKc_Aatyk2 Catalytic 99.9 1.1E-26 2.3E-31 246.1 23.2 238 26-280 2-265 (268)
362 cd05576 STKc_RPK118_like Catal 99.9 4.2E-27 9.1E-32 244.9 18.6 213 35-281 8-235 (237)
363 KOG0612 Rho-associated, coiled 99.9 3.2E-28 7E-33 283.0 10.8 245 16-281 72-339 (1317)
364 KOG1026 Nerve growth factor re 99.9 1E-27 2.3E-32 274.9 14.5 241 17-279 484-757 (774)
365 KOG0670 U4/U6-associated splic 99.9 3E-28 6.5E-33 263.1 9.1 236 18-281 431-747 (752)
366 KOG4257 Focal adhesion tyrosin 99.9 3.7E-27 8.1E-32 258.8 17.3 232 23-280 393-645 (974)
367 KOG0614 cGMP-dependent protein 99.9 2.3E-28 5.1E-33 263.3 6.8 236 19-281 420-678 (732)
368 KOG1187 Serine/threonine prote 99.9 7.7E-27 1.7E-31 257.4 18.7 234 20-279 76-347 (361)
369 KOG0194 Protein tyrosine kinas 99.9 3E-27 6.4E-32 263.4 14.9 236 20-280 158-416 (474)
370 KOG0671 LAMMER dual specificit 99.9 7.8E-28 1.7E-32 253.4 9.7 235 17-281 87-407 (415)
371 cd05610 STKc_MASTL Catalytic d 99.9 1.6E-26 3.4E-31 275.5 21.7 145 19-177 4-152 (669)
372 KOG4250 TANK binding protein k 99.9 3.5E-27 7.5E-32 264.8 13.9 208 18-243 12-226 (732)
373 KOG1095 Protein tyrosine kinas 99.9 1.2E-26 2.7E-31 274.9 19.1 239 19-281 692-958 (1025)
374 PLN03225 Serine/threonine-prot 99.9 8E-27 1.7E-31 272.0 17.1 276 17-316 130-478 (566)
375 KOG0665 Jun-N-terminal kinase 99.9 2.7E-27 5.9E-32 244.2 11.3 241 18-281 16-311 (369)
376 KOG1027 Serine/threonine prote 99.9 2.8E-27 6E-32 268.8 11.4 233 22-281 512-768 (903)
377 KOG0986 G protein-coupled rece 99.9 2.3E-27 5E-32 253.3 9.8 241 16-281 182-447 (591)
378 KOG0603 Ribosomal protein S6 k 99.9 7E-27 1.5E-31 260.6 14.0 228 18-281 321-564 (612)
379 smart00220 S_TKc Serine/Threon 99.9 6.7E-26 1.5E-30 232.8 18.8 221 35-281 4-242 (244)
380 KOG0668 Casein kinase II, alph 99.9 1.1E-26 2.4E-31 229.2 11.9 232 17-281 36-323 (338)
381 KOG0587 Traf2- and Nck-interac 99.9 1.2E-25 2.7E-30 256.6 20.8 250 15-281 15-283 (953)
382 KOG1006 Mitogen-activated prot 99.9 1.6E-27 3.4E-32 239.9 4.7 235 25-281 70-328 (361)
383 KOG0696 Serine/threonine prote 99.9 1.4E-26 3.1E-31 244.1 10.9 250 15-298 345-616 (683)
384 KOG4278 Protein tyrosine kinas 99.9 4.1E-26 8.8E-31 249.9 14.4 234 21-280 269-519 (1157)
385 KOG0664 Nemo-like MAPK-related 99.9 1.4E-27 3.1E-32 240.3 1.6 244 19-281 53-344 (449)
386 KOG1094 Discoidin domain recep 99.9 1.1E-25 2.3E-30 246.4 15.5 236 19-280 538-800 (807)
387 KOG0196 Tyrosine kinase, EPH ( 99.9 1.1E-25 2.4E-30 253.4 11.1 237 21-280 631-887 (996)
388 KOG1290 Serine/threonine prote 99.9 2.7E-24 5.8E-29 232.0 19.6 136 18-163 77-222 (590)
389 KOG0608 Warts/lats-like serine 99.9 4.7E-25 1E-29 242.6 14.0 241 20-281 630-929 (1034)
390 KOG1151 Tousled-like protein k 99.9 1.6E-25 3.4E-30 237.7 9.9 250 18-281 462-742 (775)
391 KOG2052 Activin A type IB rece 99.9 1.5E-24 3.2E-29 232.1 16.6 240 20-278 212-497 (513)
392 KOG0199 ACK and related non-re 99.9 4.5E-25 9.7E-30 245.3 12.9 238 20-280 111-368 (1039)
393 KOG0984 Mitogen-activated prot 99.9 6.6E-25 1.4E-29 214.0 12.4 204 19-242 46-253 (282)
394 PLN03224 probable serine/threo 99.9 5.9E-24 1.3E-28 242.8 21.7 258 16-281 142-501 (507)
395 KOG0695 Serine/threonine prote 99.9 5.2E-25 1.1E-29 227.0 11.5 250 15-298 246-526 (593)
396 PLN00113 leucine-rich repeat r 99.9 2.3E-24 5.1E-29 268.2 18.3 222 21-281 692-948 (968)
397 cd00180 PKc Catalytic domain o 99.9 4.6E-23 9.9E-28 205.9 22.2 210 27-280 1-214 (215)
398 KOG1152 Signal transduction se 99.9 1.7E-24 3.8E-29 236.9 8.6 195 20-241 562-769 (772)
399 KOG3653 Transforming growth fa 99.9 2.7E-23 5.9E-28 224.0 11.6 238 19-277 210-496 (534)
400 KOG0200 Fibroblast/platelet-de 99.9 1.6E-22 3.4E-27 238.2 19.0 237 20-279 297-574 (609)
401 smart00221 STYKc Protein kinas 99.9 3.6E-22 7.7E-27 203.6 18.9 199 21-243 1-202 (225)
402 KOG0576 Mitogen-activated prot 99.9 7.9E-24 1.7E-28 235.2 3.7 240 17-281 13-272 (829)
403 KOG1025 Epidermal growth facto 99.9 3E-22 6.5E-27 226.4 12.7 231 24-279 701-952 (1177)
404 PLN00181 protein SPA1-RELATED; 99.9 1.1E-21 2.3E-26 239.2 11.1 199 73-281 26-266 (793)
405 KOG1167 Serine/threonine prote 99.8 1.2E-20 2.5E-25 201.9 11.8 260 19-313 36-405 (418)
406 KOG1024 Receptor-like protein 99.8 6.7E-20 1.5E-24 193.2 12.4 241 19-280 284-551 (563)
407 KOG1345 Serine/threonine kinas 99.8 1E-20 2.2E-25 191.5 6.0 225 20-271 25-275 (378)
408 PRK09188 serine/threonine prot 99.8 1.4E-18 3E-23 191.1 14.4 169 16-210 15-195 (365)
409 smart00750 KIND kinase non-cat 99.8 2.7E-18 5.9E-23 169.8 13.0 144 110-281 1-166 (176)
410 KOG0590 Checkpoint kinase and 99.7 6.4E-19 1.4E-23 205.7 5.9 241 20-281 318-586 (601)
411 COG0515 SPS1 Serine/threonine 99.7 3.6E-16 7.7E-21 165.2 22.0 243 21-280 2-275 (384)
412 PF14531 Kinase-like: Kinase-l 99.7 4.7E-17 1E-21 172.2 11.8 240 20-271 13-288 (288)
413 KOG4158 BRPK/PTEN-induced prot 99.7 1.6E-16 3.5E-21 168.3 12.3 192 77-275 274-505 (598)
414 KOG1164 Casein kinase (serine/ 99.7 1.7E-15 3.6E-20 165.7 20.6 203 20-242 19-238 (322)
415 KOG1165 Casein kinase (serine/ 99.7 7.5E-16 1.6E-20 160.3 13.9 204 16-242 25-237 (449)
416 cd05147 RIO1_euk RIO kinase fa 99.6 4.5E-16 9.8E-21 157.1 9.4 139 24-181 2-169 (190)
417 cd05145 RIO1_like RIO kinase f 99.6 1.9E-15 4.1E-20 152.6 12.0 141 23-181 1-169 (190)
418 PRK10359 lipopolysaccharide co 99.6 1.2E-15 2.7E-20 156.9 10.1 177 18-235 30-216 (232)
419 PRK10345 hypothetical protein; 99.6 2.4E-14 5.2E-19 146.5 13.6 136 23-177 6-157 (210)
420 KOG0603 Ribosomal protein S6 k 99.5 1.2E-15 2.5E-20 171.4 2.3 214 38-281 15-244 (612)
421 KOG1163 Casein kinase (serine/ 99.5 2.8E-14 6E-19 142.9 11.4 203 17-242 13-222 (341)
422 PRK12274 serine/threonine prot 99.5 4E-14 8.8E-19 143.1 12.4 191 20-241 3-207 (218)
423 KOG0195 Integrin-linked kinase 99.5 1.3E-14 2.9E-19 147.1 6.2 229 21-278 192-440 (448)
424 KOG1033 eIF-2alpha kinase PEK/ 99.5 7.5E-15 1.6E-19 162.1 4.8 168 100-277 329-509 (516)
425 smart00090 RIO RIO-like kinase 99.5 3.6E-14 7.9E-19 148.2 9.6 145 20-181 29-200 (237)
426 KOG1023 Natriuretic peptide re 99.5 3E-13 6.6E-18 152.0 11.9 194 73-280 1-220 (484)
427 KOG0606 Microtubule-associated 99.4 1.2E-13 2.6E-18 162.1 7.2 200 18-274 82-306 (1205)
428 cd05144 RIO2_C RIO kinase fami 99.4 8.8E-13 1.9E-17 133.8 11.5 137 20-181 16-177 (198)
429 PRK14879 serine/threonine prot 99.4 1.5E-12 3.2E-17 133.0 13.2 133 25-178 2-143 (211)
430 KOG1166 Mitotic checkpoint ser 99.4 1E-12 2.3E-17 157.1 11.2 196 17-240 696-902 (974)
431 TIGR03724 arch_bud32 Kae1-asso 99.4 2.3E-12 5.1E-17 130.4 11.6 129 27-179 2-139 (199)
432 PRK09605 bifunctional UGMP fam 99.3 7.4E-12 1.6E-16 146.3 13.9 136 20-180 334-478 (535)
433 cd05119 RIO RIO kinase family, 99.3 8.9E-12 1.9E-16 124.7 11.3 138 23-181 1-166 (187)
434 PRK01723 3-deoxy-D-manno-octul 99.3 2E-11 4.4E-16 127.7 12.7 130 35-179 47-192 (239)
435 KOG0601 Cyclin-dependent kinas 99.2 1.7E-11 3.6E-16 138.2 7.9 243 19-281 114-380 (524)
436 cd05120 APH_ChoK_like Aminogly 99.2 1.1E-10 2.4E-15 110.8 10.6 130 23-178 2-138 (155)
437 KOG0590 Checkpoint kinase and 99.1 7.9E-12 1.7E-16 146.5 0.6 246 17-281 18-287 (601)
438 KOG1266 Protein kinase [Signal 99.0 6.9E-11 1.5E-15 123.6 0.2 201 66-281 114-332 (458)
439 cd05146 RIO3_euk RIO kinase fa 99.0 3.1E-09 6.7E-14 107.3 11.3 138 24-181 2-176 (197)
440 PRK04750 ubiB putative ubiquin 98.9 2.5E-09 5.4E-14 123.4 7.0 143 21-181 122-316 (537)
441 TIGR01982 UbiB 2-polyprenylphe 98.9 1.1E-08 2.5E-13 116.2 11.7 141 24-180 122-308 (437)
442 cd05151 ChoK Choline Kinase (C 98.8 1.4E-08 3.1E-13 99.6 9.0 123 26-178 5-136 (170)
443 KOG0601 Cyclin-dependent kinas 98.8 4.7E-09 1E-13 118.6 4.9 239 17-281 263-515 (524)
444 KOG3741 Poly(A) ribonuclease s 98.8 9E-08 2E-12 106.2 13.9 210 35-281 291-522 (655)
445 PF01163 RIO1: RIO1 family; I 98.6 3.3E-07 7.1E-12 92.2 11.5 127 35-181 1-158 (188)
446 KOG0606 Microtubule-associated 98.6 2.4E-08 5.1E-13 118.4 3.7 241 21-281 806-1093(1205)
447 KOG0211 Protein phosphatase 2A 98.5 7E-07 1.5E-11 105.8 12.1 188 325-513 469-658 (759)
448 PF06293 Kdo: Lipopolysacchari 98.4 2.3E-06 4.9E-11 87.6 11.6 108 64-179 56-171 (206)
449 cd05154 ACAD10_11_like Acyl-Co 98.3 1.2E-06 2.6E-11 89.5 7.9 75 26-109 5-82 (223)
450 PRK15123 lipopolysaccharide co 98.3 7.1E-06 1.5E-10 87.3 13.4 136 35-178 37-194 (268)
451 COG3642 Mn2+-dependent serine/ 98.3 5.8E-06 1.2E-10 81.6 11.5 127 27-179 4-141 (204)
452 KOG2137 Protein kinase [Signal 98.3 5E-06 1.1E-10 95.8 12.6 149 326-476 340-493 (700)
453 KOG3087 Serine/threonine prote 98.3 8.2E-06 1.8E-10 80.2 11.7 143 23-179 11-166 (229)
454 COG0478 RIO-like serine/threon 98.3 7.5E-06 1.6E-10 85.3 11.6 137 21-181 93-254 (304)
455 PRK09902 hypothetical protein; 98.1 3.7E-05 8E-10 78.3 13.2 137 35-179 33-180 (216)
456 KOG1243 Protein kinase [Genera 98.1 3.2E-05 7E-10 88.9 14.1 181 332-513 327-509 (690)
457 COG4248 Uncharacterized protei 98.1 4.4E-05 9.5E-10 83.3 14.1 236 20-275 12-291 (637)
458 COG1718 RIO1 Serine/threonine 97.8 8.6E-05 1.9E-09 76.8 9.2 136 26-181 55-218 (268)
459 KOG0211 Protein phosphatase 2A 97.8 0.0002 4.4E-09 85.3 13.1 209 320-531 422-662 (759)
460 PRK09687 putative lyase; Provi 97.6 0.00034 7.4E-09 75.0 11.4 129 371-513 53-182 (280)
461 COG0661 AarF Predicted unusual 97.5 0.00046 1E-08 79.7 11.2 139 26-181 132-317 (517)
462 PRK09687 putative lyase; Provi 97.5 0.00082 1.8E-08 72.1 11.9 127 370-513 88-215 (280)
463 KOG2270 Serine/threonine prote 97.4 0.00056 1.2E-08 74.2 9.2 140 22-179 147-314 (520)
464 PF12348 CLASP_N: CLASP N term 97.4 0.0024 5.1E-08 66.2 13.8 150 375-542 56-215 (228)
465 KOG1235 Predicted unusual prot 97.3 0.00067 1.5E-08 78.2 9.2 135 26-181 168-357 (538)
466 PF12717 Cnd1: non-SMC mitotic 97.3 0.0013 2.8E-08 65.8 9.3 108 385-495 1-108 (178)
467 PF12348 CLASP_N: CLASP N term 97.3 0.0015 3.2E-08 67.7 10.2 116 366-484 88-211 (228)
468 PF06176 WaaY: Lipopolysacchar 97.2 0.0014 3E-08 67.2 9.3 65 101-178 117-183 (229)
469 PTZ00429 beta-adaptin; Provisi 97.2 0.0027 5.7E-08 76.5 12.6 135 372-513 68-202 (746)
470 PF01602 Adaptin_N: Adaptin N 97.2 0.0027 5.8E-08 74.1 12.1 96 412-513 80-175 (526)
471 TIGR02172 Fb_sc_TIGR02172 Fibr 97.1 0.0026 5.6E-08 66.2 9.8 135 25-178 7-182 (226)
472 cd05150 APH Aminoglycoside 3'- 96.9 0.0095 2.1E-07 62.2 11.9 29 149-177 164-192 (244)
473 PF01636 APH: Phosphotransfera 96.8 0.0063 1.4E-07 62.2 10.0 140 26-178 4-197 (239)
474 PRK13800 putative oxidoreducta 96.7 0.0081 1.8E-07 74.9 11.5 134 373-531 622-769 (897)
475 KOG1240 Protein kinase contain 96.7 0.0044 9.6E-08 75.1 8.5 107 373-479 579-685 (1431)
476 PRK13800 putative oxidoreducta 96.7 0.012 2.7E-07 73.3 12.6 133 371-531 651-802 (897)
477 cd00020 ARM Armadillo/beta-cat 96.6 0.008 1.7E-07 54.7 8.1 108 371-478 6-119 (120)
478 KOG1820 Microtubule-associated 96.5 0.027 5.7E-07 68.2 13.3 190 301-494 258-458 (815)
479 PF12755 Vac14_Fab1_bd: Vacuol 96.5 0.0069 1.5E-07 54.2 6.3 66 366-431 21-88 (97)
480 PF12260 PIP49_C: Protein-kina 96.4 0.0044 9.5E-08 62.5 5.5 99 67-180 7-113 (188)
481 PRK09550 mtnK methylthioribose 96.4 0.028 6.1E-07 63.2 12.2 75 25-111 32-115 (401)
482 COG2112 Predicted Ser/Thr prot 96.4 0.015 3.3E-07 57.5 8.7 131 20-180 21-157 (201)
483 PF02985 HEAT: HEAT repeat; I 96.4 0.0023 5.1E-08 44.5 2.2 31 451-481 1-31 (31)
484 PF10707 YrbL-PhoP_reg: PhoP r 96.1 0.056 1.2E-06 55.0 11.7 119 25-164 7-153 (199)
485 PF12755 Vac14_Fab1_bd: Vacuol 96.1 0.027 5.9E-07 50.4 8.2 66 408-473 24-91 (97)
486 KOG1035 eIF-2alpha kinase GCN2 96.1 0.012 2.6E-07 72.2 7.7 200 63-281 226-435 (1351)
487 PF01602 Adaptin_N: Adaptin N 96.0 0.047 1E-06 63.7 12.0 188 306-503 202-390 (526)
488 PTZ00429 beta-adaptin; Provisi 96.0 0.1 2.2E-06 63.2 14.9 184 288-480 23-209 (746)
489 PF13646 HEAT_2: HEAT repeats; 96.0 0.026 5.6E-07 48.8 7.3 86 374-475 1-88 (88)
490 cd05155 APH_ChoK_like_1 Unchar 95.9 0.044 9.4E-07 57.1 10.1 31 148-178 164-194 (235)
491 PF10508 Proteasom_PSMB: Prote 95.9 0.073 1.6E-06 62.1 12.9 153 359-513 64-225 (503)
492 TIGR01767 MTRK 5-methylthiorib 95.8 0.057 1.2E-06 59.7 10.4 74 26-111 2-84 (370)
493 PRK12396 5-methylribose kinase 95.8 0.038 8.2E-07 61.8 9.1 76 24-111 34-117 (409)
494 KOG1967 DNA repair/transcripti 95.7 0.032 7E-07 66.4 8.7 138 367-507 862-1012(1030)
495 KOG1826 Ras GTPase activating 95.7 0.0041 8.9E-08 77.6 1.5 160 64-241 1274-1440(2724)
496 cd00020 ARM Armadillo/beta-cat 95.7 0.014 3.1E-07 53.0 4.5 100 407-507 3-108 (120)
497 PLN02876 acyl-CoA dehydrogenas 95.6 0.096 2.1E-06 64.9 12.8 77 25-109 44-126 (822)
498 PLN02756 S-methyl-5-thioribose 95.6 0.083 1.8E-06 59.4 11.0 33 143-176 225-257 (418)
499 TIGR02721 ycfN_thiK thiamine k 95.3 0.11 2.4E-06 54.8 10.5 29 149-178 147-175 (256)
500 PF13095 FTA2: Kinetochore Sim 95.3 0.22 4.7E-06 50.8 11.8 134 19-176 37-206 (207)
No 1
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-99 Score=843.45 Aligned_cols=533 Identities=45% Similarity=0.740 Sum_probs=469.3
Q ss_pred CCCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 14 AGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 14 ~~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.+.++|+|+| +...-++ +.|. .|+.|.++.+|+||.++.+.. ...+.++++++.||+||||||++|+++++.+.
T Consensus 8 ~~~~~fpY~l-e~~~~~~~a~~~--~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~ 82 (690)
T KOG1243|consen 8 DSSSQFPYDL-EETAFSSEALWP--DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG 82 (690)
T ss_pred cccccCCccc-ccccCCCccccc--ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccC
Confidence 4558999999 4443333 5554 799999999999999997655 56778999999999999999999999999853
Q ss_pred cccCCcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 93 IDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
++|||||+|.||..++++.+ .+++.||++||+.||.|||++|+++||||+.++|||++.|+|||+|
T Consensus 83 --------~~ylvTErV~Pl~~~lk~l~------~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLgg 148 (690)
T KOG1243|consen 83 --------TLYLVTERVRPLETVLKELG------KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGG 148 (690)
T ss_pred --------ceEEEeeccccHHHHHHHhH------HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEee
Confidence 89999999999999999876 6779999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhccCCC
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASI 252 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~~~i 252 (778)
|++++.....+. ..++.+.. ..|..|+.+.. ..+..|+|.|||+++|+|+| .+-....+.+...|
T Consensus 149 le~v~~~~~~~~-----~~~~~~~~-~s~~~P~~~~~--------s~~s~D~~~Lg~li~el~ng-~~~~~~~~~~~~~i 213 (690)
T KOG1243|consen 149 LELVSKASGFNA-----PAKSLYLI-ESFDDPEEIDP--------SEWSIDSWGLGCLIEELFNG-SLLTKTDLSNTGKI 213 (690)
T ss_pred eEEEeccccCCc-----ccccchhh-hcccChhhcCc--------cccchhhhhHHHHHHHHhCc-ccCcchhhhccCcc
Confidence 999988766432 11111111 14666766543 22689999999999999999 55566778888999
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcccCChhhHhHhhhhchhhhcCCChhhh
Q 004025 253 PKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIV 332 (778)
Q Consensus 253 P~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~~k~~~EK~~F~~~L~~~l~~fp~~~~ 332 (778)
|+.....+++.+-..+..|+....++..++ -.++||+|.++.++.||+++.+|+.+||..||+.|.+.++.||++++
T Consensus 214 pk~~~~~~~k~~~~~~~~r~n~~~~~~~~~---~~~gff~n~fvd~~~fLeel~lks~~eK~~Ff~~L~~~l~~~pe~i~ 290 (690)
T KOG1243|consen 214 PKALIELYCKKLGATELKRPNKLRFILECR---LLGGFFRNDFVDTLLFLEELRLKSVEEKQKFFSGLIDRLDNFPEEII 290 (690)
T ss_pred chhHHHHHHHHhccccccccchhhHHHHHH---hccccccchHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhhhhHHHH
Confidence 999999998888889999999888888764 34689999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHhhCCCCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcc
Q 004025 333 LKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQV 412 (778)
Q Consensus 333 ~~kILP~Ll~~~~~~~~~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I 412 (778)
.+||+|.|+.+++++.+++.+|.|+|++++.++.++|+.+|.|+|++||+++||+||+.||+|++.|+++|++++++++|
T Consensus 291 ~~kvlp~Ll~~~~~g~a~~~~ltpl~k~~k~ld~~eyq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I 370 (690)
T KOG1243|consen 291 ASKVLPILLAALEFGDAASDFLTPLFKLGKDLDEEEYQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQI 370 (690)
T ss_pred HHHHHHHHHHHhhccccchhhhhHHHHhhhhccccccccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHH
Q 004025 413 YPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLIN 492 (778)
Q Consensus 413 ~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~ 492 (778)
|||+..||.|+++.|||+|||+|+.|+|||+++++|+||||+|+++|.|++++||||||||||||++||.+..|++||+.
T Consensus 371 ~phv~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~ 450 (690)
T KOG1243|consen 371 FPHVALGFLDTNATLREQTLKSMAVLAPKLSKRNLNGELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLAS 450 (690)
T ss_pred HHHHHhhcccCCHHHHHHHHHHHHHHHhhhchhhhcHHHHHHHHhhCccccCcccccceeeecccccccchhhhccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCchhhhheeee-----cc--------------------CCHHHHHHHHHHHHHHHHHHHHHH-hhcCCCC
Q 004025 493 AFTVRALRDTFSPARGAAKIL-----SY--------------------LNCDVRSKAFQAVDQFLQIVKQYH-EKTNTGD 546 (778)
Q Consensus 493 af~~~~lkD~f~~~R~A~l~a-----~~--------------------~~~~VR~~a~~~~~~~l~~l~~~~-~~~~~~~ 546 (778)
||+ |+|||||+|+|.|++.+ +| +++.||++|+++++.|++++|+.+ +.+..++
T Consensus 451 aft-ralkdpf~paR~a~v~~l~at~~~~~~~~va~kIlp~l~pl~vd~e~~vr~~a~~~i~~fl~kl~~~~~~~~~~ge 529 (690)
T KOG1243|consen 451 AFT-RALKDPFVPARKAGVLALAATQEYFDQSEVANKILPSLVPLTVDPEKTVRDTAEKAIRQFLEKLEKVSPESTEAGE 529 (690)
T ss_pred hhh-hhhcCCCCCchhhhhHHHhhcccccchhhhhhhccccccccccCcccchhhHHHHHHHHHHhhhhhhccccccccc
Confidence 999 99999999999999999 23 899999999999999999999997 4444333
Q ss_pred CCCCCCCCCCCCCCchhhHHHHHHhhccCCCCCCCCCcccCC
Q 004025 547 ATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQAPVASAN 588 (778)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~wa~~~~~~~~~~~~~~~~~~~~ 588 (778)
..++ .....++...|+||++++++.|+++ .++..++.+
T Consensus 530 ~~~s---~~~~~~~~~~~a~Wa~t~~s~~f~~-~~~~~~sp~ 567 (690)
T KOG1243|consen 530 KAAS---PVKNHPAEPVWAGWALTSLSAKFKP-PQASSASPS 567 (690)
T ss_pred eecc---ccccCCccccccccchhhhhccccC-CcccccCCC
Confidence 3211 1111234456999999999999999 544444333
No 2
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-42 Score=385.94 Aligned_cols=433 Identities=21% Similarity=0.330 Sum_probs=354.3
Q ss_pred CCCCCCCceeccCCCCCC--CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 14 AGVKDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 14 ~~~~~~~Y~i~~~lg~g~--g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
.......|++.+.++..+ +.|++|.|+.+..+.+.-.+.... ..+.+...-+.+||| .+
T Consensus 32 ~~~~~~~~~~~~~~~~~g~g~~~~ly~~~~~~sk~~~~~~s~~~--------~~ld~~~~~~~~lr~------~~----- 92 (700)
T KOG2137|consen 32 GPKESQSYRSLNQVGSAGPGDAWKLYAGKKSGSKAPTLKKSAVV--------WMLDKRASSLQQLRG------LD----- 92 (700)
T ss_pred CcccccccccccceeecCCCchhhhhhhhccCccCccccceeee--------eecChhhhHHHHHhc------cc-----
Confidence 334556799999888765 789999999887776652222211 111222233455666 11
Q ss_pred ccccCCcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 92 NIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.+...||-. -..+.+++.||.|+|+++++||+||.|++|+++.+|.|||+
T Consensus 93 ---------~vs~aTe~~---------------------f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~ 142 (700)
T KOG2137|consen 93 ---------GVSKATEDG---------------------FANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLA 142 (700)
T ss_pred ---------chhhcccHh---------------------hhhhhcccchhhhhccCcceeecccchhheeeccCcceeec
Confidence 344444432 11145566999999999999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccC------CCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCChh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVG------AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTE 244 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~------~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~~ 244 (778)
||+++....+.... +...|....+ ..|.+||++.+ ...+.++|+|||||+||.+++|+ .++...
T Consensus 143 Gf~f~v~~~~~~~~---p~~~yd~~lp~~~~~~~~f~apE~~~~------~~~~~~sd~fSlG~li~~i~~~gk~i~~a~ 213 (700)
T KOG2137|consen 143 GFSFCVNANGPTEY---PFSEYDPPLPLLLQPHLNFLAPEYLLG------TTNTPASDVFSLGVLIYTIYNGGKSIIAAN 213 (700)
T ss_pred cchhhhccCCCCcc---ccccCCCCCChhhccCcccccchhhcc------ccccccccceeeeeEEEEEecCCcchhhcc
Confidence 99999877663321 2222222221 27999999887 35677999999999999999654 433211
Q ss_pred -------h---------hhccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcccC
Q 004025 245 -------E---------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLK 308 (778)
Q Consensus 245 -------~---------l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~~k 308 (778)
. ...-.++|.++.+.++++++.++..||++..++.. .||++..+.+++|||.+..|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~--------~ff~D~~~~aLrfLD~l~~k 285 (700)
T KOG2137|consen 214 GGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSI--------PFFSDPGLKALRFLDDLPQK 285 (700)
T ss_pred CCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcc--------cccCCchhhhhhhccccccc
Confidence 0 11125799999999999999999999987776665 49999999999999999999
Q ss_pred ChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCh-HH
Q 004025 309 DSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASND-RA 387 (778)
Q Consensus 309 ~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~D-r~ 387 (778)
++.||.+|++.|.++++.||.++..+||||.|++++......+.+|+.++.|++.++..+|..+++|.|.++|.-++ .+
T Consensus 286 dn~qKs~Flk~Ls~~ip~fp~rv~~~kiLP~L~~el~n~~~vp~~LP~v~~i~~~~s~~~~~~~~~p~l~pi~~~~~~~~ 365 (700)
T KOG2137|consen 286 DNSQKSSFLKGLSKLIPTFPARVLFQKILPTLVAELVNTKMVPIVLPLVLLIAEGLSQNEFGPKMLPALKPIYSASDPKQ 365 (700)
T ss_pred CcHHHHHHHHHHHHhhccCCHHHHHHhhhhHHHHHhccccccccccchhhhhhhccchhhhhhhhhHHHHHHhccCCccc
Confidence 99999999999999999999999999999999999988888888999999999999999999999999999999555 48
Q ss_pred HHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccC-CCCcc
Q 004025 388 IRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVD-EEPAI 466 (778)
Q Consensus 388 iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D-~~~~I 466 (778)
+++++++|++.+.++++++++.++|+|.|+..++|.+..|+|.+|+.++.++..|+...+.+.|||.|..+... ....|
T Consensus 366 ~~l~i~e~mdlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~iD~~~vk~~ilP~l~~l~~~tt~~~v 445 (700)
T KOG2137|consen 366 ALLFILENMDLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAESIDVPFVKQAILPRLKNLAFKTTNLYV 445 (700)
T ss_pred chhhHHhhHHHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHhccHHHHHHHHHHHhhcchhcccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999865 56899
Q ss_pred hhhHHHHHHHhhhhcccccchhhhHHHHHhhh-hcCCCchhhhheeee
Q 004025 467 RTNTTILLGNIASHLNEGTRKRVLINAFTVRA-LRDTFSPARGAAKIL 513 (778)
Q Consensus 467 Rtnt~icl~kIa~~L~~~~~~~vL~~af~~~~-lkD~f~~~R~A~l~a 513 (778)
|+|++.||+.+++.++..+.-..++|.+. .. .+||-+-.+.-.|+.
T Consensus 446 kvn~L~c~~~l~q~lD~~~v~d~~lpi~~-~~~~~dp~iv~~~~~i~~ 492 (700)
T KOG2137|consen 446 KVNVLPCLAGLIQRLDKAAVLDELLPILK-CIKTRDPAIVMGFLRIYE 492 (700)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HhcCCCcHHHHHHHHHHH
Confidence 99999999999999999888888888777 54 778887777666665
No 3
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=338.95 Aligned_cols=239 Identities=20% Similarity=0.262 Sum_probs=199.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|+...++|+|+ | +||+|++|++|+.||||+|.-+..+....+.+.+|++.||+|+|||++.++++|..
T Consensus 2 ekYE~LgkvGEGSYG--vV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr------- 72 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYG--VVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR------- 72 (396)
T ss_pred cHHhhhhccccCcce--EEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-------
Confidence 3588899999998 9 99999999999999999998776666778889999999999999999999999976
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+..+|+|+|||. .+...|..... ....+.++.+++|++.|+.|+|. .+++||||||+||+|+.+|.+||||||++
T Consensus 73 -krklhLVFE~~dhTvL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk-~n~IHRDIKPENILit~~gvvKLCDFGFA 148 (396)
T KOG0593|consen 73 -KRKLHLVFEYCDHTVLHELERYPN--GVPSELVKKYLYQLLKAIHFCHK-NNCIHRDIKPENILITQNGVVKLCDFGFA 148 (396)
T ss_pred -cceeEEEeeecchHHHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhhh-cCeecccCChhheEEecCCcEEeccchhh
Confidence 458999999995 45555555432 12345677889999999999995 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~---- 248 (778)
+.+...++ . ...++.+.+|+|||++.++ ..|...+|||++||++.||++|.++|.+. ++-.
T Consensus 149 R~L~~pgd----~--YTDYVATRWYRaPELLvGD-----tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~kt 217 (396)
T KOG0593|consen 149 RTLSAPGD----N--YTDYVATRWYRAPELLVGD-----TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKT 217 (396)
T ss_pred HhhcCCcc----h--hhhhhhhhhccChhhhccc-----CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHH
Confidence 99875322 1 2235677799999999986 57889999999999999999999987532 1100
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+..-+.++++.||..||..|++.++++.|+
T Consensus 218 LG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~ 285 (396)
T KOG0593|consen 218 LGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHP 285 (396)
T ss_pred HcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcCh
Confidence 012223467788999999999999999999997
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-40 Score=360.98 Aligned_cols=248 Identities=20% Similarity=0.345 Sum_probs=208.6
Q ss_pred CCCceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|..++.||.|+ .-++|.+++..+|+.||+|++.++... ....+.+.+||++.++|+|||||+++++||+.
T Consensus 17 ~~~Y~~g~~LGkGg-FA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs----- 90 (592)
T KOG0575|consen 17 SKRYKRGRFLGKGG-FARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS----- 90 (592)
T ss_pred cceeeeeeeeccCc-ceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC-----
Confidence 36799999999996 228999999999999999999985433 35677899999999999999999999999984
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++|||.|+| ++|..+++.++... +...+++++||+.||.|||+ .+|+|||||..|+|++++.++||||||
T Consensus 91 ---~nVYivLELC~~~sL~el~Krrk~lt---EpEary~l~QIv~GlkYLH~-~~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 91 ---NNVYIVLELCHRGSLMELLKRRKPLT---EPEARYFLRQIVEGLKYLHS-LGIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred ---CceEEEEEecCCccHHHHHHhcCCCC---cHHHHHHHHHHHHHHHHHHh-cCceecccchhheeecCcCcEEecccc
Confidence 4999999999 68999998655332 33356779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----- 249 (778)
+++.+..+++ ..+..++++.|.|||++.. .+++..+||||+||+||.|+.|+|||++..++++
T Consensus 164 LAt~le~~~E------rk~TlCGTPNYIAPEVl~k------~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik 231 (592)
T KOG0575|consen 164 LATQLEYDGE------RKKTLCGTPNYIAPEVLNK------SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK 231 (592)
T ss_pred eeeeecCccc------ccceecCCCcccChhHhcc------CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH
Confidence 9999986532 2344577789999999885 5788899999999999999999999998876554
Q ss_pred ---CCCCc----chHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 250 ---ASIPK----SLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 250 ---~~iP~----~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
+.+|. ...+++.+||..||..||+++++|.|+ |+.++|+..
T Consensus 232 ~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~---Ff~~g~~p~ 279 (592)
T KOG0575|consen 232 LNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHP---FFKSGFTPA 279 (592)
T ss_pred hcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCH---hhhCCCcCC
Confidence 34554 456789999999999999999999997 232455543
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=343.26 Aligned_cols=236 Identities=20% Similarity=0.303 Sum_probs=199.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
-+|++.++||.|. + +||+|+++.++..||||.+.++.......+.+..|+++||.|+|||||.++|+++.+
T Consensus 10 ~~y~~~~~iG~Gsfa--vVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~------ 81 (429)
T KOG0595|consen 10 GDYELSREIGSGSFA--VVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD------ 81 (429)
T ss_pred ccceehhhccCcceE--EEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC------
Confidence 4799999999998 7 999999999999999999998876667788999999999999999999999999984
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC------CcEE
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT------LDWK 169 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~------g~~K 169 (778)
.++|+||||| |+|..||+.++.. .+..++..+.||+.||+|||. .+||||||||+||+++.. -.+|
T Consensus 82 --~~i~lVMEyC~gGDLs~yi~~~~~l---~e~t~r~Fm~QLA~alq~L~~-~~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 82 --DFIYLVMEYCNGGDLSDYIRRRGRL---PEATARHFMQQLASALQFLHE-NNIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred --CeEEEEEEeCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeeccCCcceEEeccCCCCCCCceEE
Confidence 4999999999 6899999998643 345567779999999999995 999999999999999865 3489
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT 249 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~ 249 (778)
|+|||+++.+.... .....++.+-|||||++.. +.|+.++|+||+|+++|++++|++||+.....++
T Consensus 156 IADFGfAR~L~~~~-------~a~tlcGSplYMAPEV~~~------~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL 222 (429)
T KOG0595|consen 156 IADFGFARFLQPGS-------MAETLCGSPLYMAPEVIMS------QQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL 222 (429)
T ss_pred ecccchhhhCCchh-------HHHHhhCCccccCHHHHHh------ccccchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence 99999999987531 1223356679999999976 5788999999999999999999999985432221
Q ss_pred -----------C----CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 -----------A----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 -----------~----~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .+...+.+++..++..+++.|.+..+++.|+
T Consensus 223 ~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 223 LLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred HHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 1 1233456778889999999999999888776
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-39 Score=345.07 Aligned_cols=239 Identities=20% Similarity=0.259 Sum_probs=195.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-----hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-----GHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-----~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.-|.+.+.+|+|. | .|-.|..+.+|+.||||++.+..... ......++|+++|++|.||||++++++|+.+
T Consensus 172 d~yii~~~LGsGafg--~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~- 248 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFG--LVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP- 248 (475)
T ss_pred ceeEeeeeecCCcee--EEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC-
Confidence 3589999999998 8 89999999999999999999753322 1122367999999999999999999999974
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC---Cc
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LD 167 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~---g~ 167 (778)
.+.|||+||| |.|.+.+-..+....... +.+++|++.||.|||+ .||+||||||+||+++.+ ..
T Consensus 249 -------ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~---K~~f~Qll~avkYLH~-~GI~HRDiKPeNILl~~~~e~~l 317 (475)
T KOG0615|consen 249 -------DSSYMVLEYVEGGELFDKVVANKYLREDLG---KLLFKQLLTAVKYLHS-QGIIHRDIKPENILLSNDAEDCL 317 (475)
T ss_pred -------CceEEEEEEecCccHHHHHHhccccccchh---HHHHHHHHHHHHHHHH-cCcccccCCcceEEeccCCcceE
Confidence 4889999999 579988877765544433 4449999999999995 999999999999999876 67
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-- 245 (778)
+||.|||+++...... .....++++.|.|||++.+.-. ..++.++|+|||||++|-+++|.+||..+.
T Consensus 318 lKItDFGlAK~~g~~s-------fm~TlCGTpsYvAPEVl~~kg~---~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~ 387 (475)
T KOG0615|consen 318 LKITDFGLAKVSGEGS-------FMKTLCGTPSYVAPEVLASKGV---EYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD 387 (475)
T ss_pred EEecccchhhccccce-------ehhhhcCCccccChhheecCCe---ecccchheeeeccceEEEEeccCCCcccccCC
Confidence 9999999999886421 1234567789999999876422 345568999999999999999999996431
Q ss_pred --hh-cc------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 --LR-NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 --l~-~~------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+. ++ .+|......++.+||..||+.|++++++|+||
T Consensus 388 ~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 388 PSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred ccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 11 11 35667788899999999999999999999998
No 7
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.8e-39 Score=352.60 Aligned_cols=244 Identities=22% Similarity=0.342 Sum_probs=209.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|.+.+.||.|. | +||+|++|.+.+.||||.+++....+..++.+++|+++++.|+||||+.++++||+.
T Consensus 2 e~yhv~e~iG~Gsfg--~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~------ 73 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFG--RVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS------ 73 (808)
T ss_pred cchhHHHHhcCCccc--eeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc------
Confidence 4699999999999 8 999999999999999999999877777888999999999999999999999999984
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.++++||||| ++|..+|...+..+ ++.+..+.+|++.||.|||+ .+|+|||+||.||++...|.+||||||++
T Consensus 74 --~~~~vVte~a~g~L~~il~~d~~lp---Ee~v~~~a~~LVsaL~yLhs-~rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 74 --AHLWVVTEYAVGDLFTILEQDGKLP---EEQVRAIAYDLVSALYYLHS-NRILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred --ceEEEEehhhhhhHHHHHHhccCCC---HHHHHHHHHHHHHHHHHHHh-cCcccccCCcceeeecCCCceeechhhhh
Confidence 4999999999 78999998876543 45566679999999999995 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
+.+.... .+ ...-.+++.|||||+..+ ..|+..+|+|||||++||++.|+|||-...+-+
T Consensus 148 r~m~~~t-----~v-ltsikGtPlYmAPElv~e------~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d 215 (808)
T KOG0597|consen 148 RAMSTNT-----SV-LTSIKGTPLYMAPELVEE------QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD 215 (808)
T ss_pred hhcccCc-----ee-eeeccCcccccCHHHHcC------CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC
Confidence 9886531 11 122245568999999987 578899999999999999999999997654322
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
...+...+..+++.||.+||.+|+++.+++.|+ ||-+.++
T Consensus 216 ~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp---F~k~~~~ 259 (808)
T KOG0597|consen 216 PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP---FWKGKIN 259 (808)
T ss_pred CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcCh---HHhhhhh
Confidence 123445678889999999999999999999998 6655443
No 8
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=334.07 Aligned_cols=235 Identities=18% Similarity=0.211 Sum_probs=198.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+.+..+.||.|. | +||+++|+.++..+|+|++... .++...+++.+|+++|+..+||+|++||+.|..+.
T Consensus 80 dle~~~~lG~G~gG--~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~------ 150 (364)
T KOG0581|consen 80 DLERLGVLGSGNGG--TVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG------ 150 (364)
T ss_pred HhhhhhhcccCCCc--EEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC------
Confidence 566677899998 8 9999999999999999999543 34456778999999999999999999999999753
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
. .++|+|||+ ++|..+++..+. ..+..+..+.+||++||.|||+..+||||||||+||+||.+|++||||||.+
T Consensus 151 ~-~isI~mEYMDgGSLd~~~k~~g~---i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 151 E-EISICMEYMDGGSLDDILKRVGR---IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred c-eEEeehhhcCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEecccccc
Confidence 1 599999999 689999987643 3355677789999999999997689999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh---------hhh
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE---------ELR 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~---------~l~ 247 (778)
..+.+. ....++++..||+||.+.+ ..|+.++||||||+.|+|++.|+.|+... .+.
T Consensus 227 ~~lvnS--------~a~tfvGT~~YMsPERi~g------~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~ 292 (364)
T KOG0581|consen 227 GILVNS--------IANTFVGTSAYMSPERISG------ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC 292 (364)
T ss_pred HHhhhh--------hcccccccccccChhhhcC------CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH
Confidence 988653 2334567779999999998 47888999999999999999998776542 011
Q ss_pred -----ccCCCCc-----chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPK-----SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~-----~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|. ++..++..||.+||.+|+++.++++|+
T Consensus 293 ~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 293 AIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred HHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 1233444 488999999999999999999999999
No 9
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-37 Score=336.16 Aligned_cols=244 Identities=21% Similarity=0.333 Sum_probs=205.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|+..++||+|. | .||+|++..+|+.||+|++......+.....+.+||++||+|.||||+++.+.+....
T Consensus 115 ~~~~feki~kIGeGTyg--~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--- 189 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYG--QVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--- 189 (560)
T ss_pred chHHHHHHHHhcCcchh--heeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC---
Confidence 445699999999999 8 8999999999999999999988777777778899999999999999999999987653
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+|+||+ -+|.-++...... ..+..|+.++.||+.||.|||. .+++|||||.+||+||.+|.+||+|||
T Consensus 190 ---~~siYlVFeYMdhDL~GLl~~p~vk--ft~~qIKc~mkQLl~Gl~~cH~-~gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 190 ---SGSIYLVFEYMDHDLSGLLSSPGVK--FTEPQIKCYMKQLLEGLEYCHS-RGVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred ---CceEEEEEecccchhhhhhcCCCcc--cChHHHHHHHHHHHHHHHHHhh-cCeeeccccccceEEcCCCCEEecccc
Confidence 24899999999 5798888775432 2344578889999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhcc-
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~~- 249 (778)
+++.+...... + ....+++.+|+|||++.+. ..|+.++|+||.||+|.|||.|++++... |+..+
T Consensus 264 LAr~y~~~~~~---~--~T~rVvTLWYRpPELLLG~-----t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIf 333 (560)
T KOG0600|consen 264 LARFYTPSGSA---P--YTSRVVTLWYRPPELLLGA-----TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIF 333 (560)
T ss_pred ceeeccCCCCc---c--cccceEEeeccChHHhcCC-----cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHH
Confidence 99988764321 1 2345677899999999986 68999999999999999999999987532 22111
Q ss_pred ------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+|....+++..||..||.+|.++.+.|++.
T Consensus 334 klcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~se 401 (560)
T KOG0600|consen 334 KLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSE 401 (560)
T ss_pred HHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCc
Confidence 23566677889999999999999999999985
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=321.83 Aligned_cols=240 Identities=18% Similarity=0.203 Sum_probs=198.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEee-eeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLH-STEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d-~~e~e~~~g~ 96 (778)
.+|.|.++||.|. | +||++.+..+|..||.|.+.....+......+..|+.+|++|+||||++|++ .|..+
T Consensus 19 ~~y~Il~~IG~GsFg--~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~----- 91 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFG--EVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIED----- 91 (375)
T ss_pred HHHHHHHHHcCCcch--heEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc-----
Confidence 3599999999999 8 9999999999999999999876666666778889999999999999999998 55443
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHH-HHHHHHHHHHHHHHHHc--CC-CccccccCCCCeEEcCCCcEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEY-YAWGLNQIAKAVSFLNN--DC-KLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~-i~~gl~QI~~aL~fLH~--~~-~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+|||||+| |+|.+.|+..+.......+- ++.++.|++.||..+|+ .. -++||||||.|||++.+|.+||
T Consensus 92 --~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 92 --NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred --chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence 24699999999 78999998876555444444 44558899999999997 22 3899999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-- 248 (778)
||||+++.+... .......++++.||+||.+.+ ..|+.++|+|||||++|||+.-++||..+.+-+
T Consensus 170 GDfGL~r~l~s~------~tfA~S~VGTPyYMSPE~i~~------~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~ 237 (375)
T KOG0591|consen 170 GDFGLGRFLSSK------TTFAHSLVGTPYYMSPERIHE------SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLC 237 (375)
T ss_pred ccchhHhHhcch------hHHHHhhcCCCcccCHHHHhc------CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHH
Confidence 999999998763 223445677889999999987 588999999999999999999999997654321
Q ss_pred -------cCCCC-----cchHHHHHHHhccCCCCCCChHHHHh
Q 004025 249 -------TASIP-----KSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 249 -------~~~iP-----~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
...+| ..+..++..|+..||..||+.-.+++
T Consensus 238 ~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 238 KKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred HHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 23466 35778899999999999998644443
No 11
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.6e-37 Score=312.24 Aligned_cols=238 Identities=18% Similarity=0.280 Sum_probs=201.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|...+++|+|. | .||+|++..+|+.||||++...+..+.....+.+|++.|+.++||||+.++|+|...
T Consensus 3 rY~~~~~lGEG~~g--vVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~------- 73 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYG--VVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK------- 73 (318)
T ss_pred hhhhhhhhcCcceE--EEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC-------
Confidence 689999999999 8 999999999999999999998877777777889999999999999999999999874
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+.||+||+ .+|...|+.....- ....|++++.|+++||.|||. ..|+||||||.|++|+++|.+||+|||+++
T Consensus 74 -~~l~lVfEfm~tdLe~vIkd~~i~l--~pa~iK~y~~m~LkGl~y~H~-~~IlHRDlKPnNLLis~~g~lKiADFGLAr 149 (318)
T KOG0659|consen 74 -SNLSLVFEFMPTDLEVVIKDKNIIL--SPADIKSYMLMTLKGLAYCHS-KWILHRDLKPNNLLISSDGQLKIADFGLAR 149 (318)
T ss_pred -CceEEEEEeccccHHHHhccccccc--CHHHHHHHHHHHHHHHHHHHh-hhhhcccCCccceEEcCCCcEEeecccchh
Confidence 4899999999 68999998876432 334488889999999999995 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhcc----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT---- 249 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~~---- 249 (778)
.+...+.. ..+ .+.+..|+|||++.|. +.|+..+||||.||++.||+.|.|+|..+ |+..+
T Consensus 150 ~f~~p~~~-----~~~-~V~TRWYRAPELLfGs-----r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~L 218 (318)
T KOG0659|consen 150 FFGSPNRI-----QTH-QVVTRWYRAPELLFGS-----RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRAL 218 (318)
T ss_pred ccCCCCcc-----ccc-ceeeeeccChHHhccc-----hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHc
Confidence 98764321 111 2667799999999886 67899999999999999999999887532 22110
Q ss_pred --------------------C------------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --------------------A------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --------------------~------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..+....+++.+|+..||.+|+++.+.|+|+
T Consensus 219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred CCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence 1 1123457788999999999999999999997
No 12
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=326.67 Aligned_cols=244 Identities=20% Similarity=0.317 Sum_probs=201.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|...+.+|.|. | .|+.++++.+|+.||||++..........++..+|++.|+.++|+||+.++|.+..+..+ .
T Consensus 23 ~y~~~~~iG~GAyG--vVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~---~ 97 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYG--VVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD---K 97 (359)
T ss_pred eecccccccCccee--eEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc---c
Confidence 455578899998 8 899999999999999999986666666788899999999999999999999999763222 1
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
-+.+|+|+|++ .+|.+.|+.... ..++.+++.+|||++||+|+|+ ++++||||||.|++++.++++|+||||+++
T Consensus 98 f~DvYiV~elMetDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiHS-AnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIHS-ANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred cceeEEehhHHhhHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhhc-ccccccccchhheeeccCCCEEecccccee
Confidence 46899999999 579999988652 3455678889999999999996 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhh------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELR------ 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~------ 247 (778)
..... ...+ ...+++.+..|+|||++.+. ..|+.++||||.||++.||++|+++|.+. |+.
T Consensus 174 ~~~~~--~~~~--~mTeYVaTRWYRAPElll~~-----~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~l 244 (359)
T KOG0660|consen 174 YLDKF--FEDG--FMTEYVATRWYRAPELLLNS-----SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELL 244 (359)
T ss_pred ecccc--Cccc--chhcceeeeeecCHHHHhcc-----ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhc
Confidence 88653 1111 12455778899999998764 68999999999999999999999998532 111
Q ss_pred ---------------------ccC------------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------------------NTA------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------------------~~~------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.. +..+...+++.+||..||.+|+|+++.|+||
T Consensus 245 GtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 245 GTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred CCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 111 2223467889999999999999999999998
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-38 Score=336.38 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=201.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~ 94 (778)
...+|.+.+++|.|+ | .||+|+.+.+|+.||||.++++....+.. .-.+|++.|++|. |||||++.+++.+..
T Consensus 8 ~m~RY~~i~klGDGTfG--sV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~-- 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFG--SVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDND-- 82 (538)
T ss_pred HHHHHHHHHHhcCCcce--eEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccC--
Confidence 457899999999999 9 99999999999999999999876654333 3458999999999 999999999998642
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||+ ..|+++++.++.. ..+..|+-+++||++||+|+| +.|+.|||+||+||+|+....+||+||
T Consensus 83 -----~~L~fVfE~Md~NLYqLmK~R~r~--fse~~irnim~QilqGL~hiH-k~GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 83 -----RILYFVFEFMDCNLYQLMKDRNRL--FSESDIRNIMYQILQGLAHIH-KHGFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred -----ceEeeeHHhhhhhHHHHHhhcCCc--CCHHHHHHHHHHHHHHHHHHH-hcCcccccCChhheEecccceeEeccc
Confidence 3899999999 6899999987432 345568888999999999999 599999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~- 248 (778)
|+|+.+... .|+.. ++-+.+|+|||++... ..|+.++|||++||+++|+++-+++|.+. ++-.
T Consensus 155 GLARev~Sk-----pPYTe--YVSTRWYRAPEvLLrs-----~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI 222 (538)
T KOG0661|consen 155 GLAREVRSK-----PPYTE--YVSTRWYRAPEVLLRS-----GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI 222 (538)
T ss_pred ccccccccC-----CCcch--hhhcccccchHHhhhc-----cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence 999998763 24433 3556799999998764 57899999999999999999999988531 1100
Q ss_pred -------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.+.+.....++.+||..||.+||++.++|+|+
T Consensus 223 c~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 223 CEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 023445677889999999999999999999997
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-37 Score=335.23 Aligned_cols=248 Identities=18% Similarity=0.314 Sum_probs=203.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
.+|.+|+.+|.|. + +|++|+.+.++..||||+++++..- +...+.+..|-..|.+| .||+|++++..|.++.
T Consensus 73 ~DF~Fg~~lGeGSYS--tV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--- 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYS--TVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--- 147 (604)
T ss_pred hhcchhheeccccce--eEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc---
Confidence 5799999999997 7 9999999999999999999976432 23344566777788888 7999999999999854
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+|+|+||+ |+|.++|++.+.... ...+++..||+.||.|||+ +|||||||||+||+++.+|.+||.||
T Consensus 148 -----sLYFvLe~A~nGdll~~i~K~Gsfde---~caR~YAAeIldAleylH~-~GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 148 -----SLYFVLEYAPNGDLLDLIKKYGSFDE---TCARFYAAEILDALEYLHS-NGIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred -----ceEEEEEecCCCcHHHHHHHhCcchH---HHHHHHHHHHHHHHHHHHh-cCceeccCChhheeEcCCCcEEEeec
Confidence 899999999 789999999875433 3345669999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCc----c---ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 174 DVLSEFDGNNEAANGPM----L---QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~----~---~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
|-+..+.........+. . ...++++-.|.+||++..+ ..+..+|+|+|||+||.|+.|.+||...+-
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~------~~~~~sDiWAlGCilyQmlaG~PPFra~Ne 292 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS------PAGPSSDLWALGCILYQMLAGQPPFRAANE 292 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC------CCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence 99988865432211111 1 1335666699999999874 567899999999999999999999975421
Q ss_pred ----hc--------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccch
Q 004025 247 ----RN--------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNK 294 (778)
Q Consensus 247 ----~~--------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~ 294 (778)
+. ...+|+...++++++|..||..|+++.++.+|+ ||.+.
T Consensus 293 yliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp--------FF~~V 344 (604)
T KOG0592|consen 293 YLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP--------FFEGV 344 (604)
T ss_pred HHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc--------ccccC
Confidence 11 245777889999999999999999999999997 77664
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=322.83 Aligned_cols=239 Identities=18% Similarity=0.280 Sum_probs=200.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
....|++.+.||.|+ | +||.++++++++.+|+|++.++...+ ...+..++|..+|.+++||.|++++..|.+.
T Consensus 23 ~~~dF~~lkviGkG~fG--kV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~--- 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFG--KVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE--- 97 (357)
T ss_pred ChhheeeeeeeeccCCc--eEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC---
Confidence 345799999999998 7 99999999999999999999875443 3577889999999999999999999999984
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+|+||+ |.|..+|++.+... +...+.++..|+.||.|||+ .+||||||||+||+++.+|.++|+|
T Consensus 98 -----~kLylVld~~~GGeLf~hL~~eg~F~---E~~arfYlaEi~lAL~~LH~-~gIiyRDlKPENILLd~~GHi~LtD 168 (357)
T KOG0598|consen 98 -----EKLYLVLDYLNGGELFYHLQREGRFS---EDRARFYLAEIVLALGYLHS-KGIIYRDLKPENILLDEQGHIKLTD 168 (357)
T ss_pred -----CeEEEEEeccCCccHHHHHHhcCCcc---hhHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHeeecCCCcEEEec
Confidence 4999999999 57999999766432 33456669999999999996 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc---
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT--- 249 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~--- 249 (778)
||+|+.....+.. ...++++..|||||++.. ..++.++|+||||+++|||++|.+||..++...+
T Consensus 169 FgL~k~~~~~~~~------t~tfcGT~eYmAPEil~~------~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~ 236 (357)
T KOG0598|consen 169 FGLCKEDLKDGDA------TRTFCGTPEYMAPEILLG------KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDK 236 (357)
T ss_pred cccchhcccCCCc------cccccCCccccChHHHhc------CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHH
Confidence 9999866543221 223577789999999987 5889999999999999999999999976653321
Q ss_pred ---------CC-CCcchHHHHHHHhccCCCCCC----ChHHHHhcc
Q 004025 250 ---------AS-IPKSLLPDYQRLLSSMPSRRL----NSSKLIENS 281 (778)
Q Consensus 250 ---------~~-iP~~L~~~i~~lL~~dP~~Rp----s~~~lL~~~ 281 (778)
.. ++...++++++||..+|.+|. ++.++-+|+
T Consensus 237 I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hp 282 (357)
T KOG0598|consen 237 ILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHP 282 (357)
T ss_pred HhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCc
Confidence 12 455678999999999999996 567777776
No 16
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.3e-37 Score=315.65 Aligned_cols=240 Identities=19% Similarity=0.279 Sum_probs=199.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|+...+|++|+ | .||+|+++.+++.||+|.++.....+..--...+||.+|.+++||||+.+-+++.-.+
T Consensus 76 ~efe~lnrI~EGtyG--iVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~----- 148 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYG--VVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN----- 148 (419)
T ss_pred HHHHHHhhcccCcce--eEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc-----
Confidence 3699999999999 9 8999999999999999999877666655555779999999999999999999998655
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
-..+||||||| .+|..++...+. ......++..+.|+++||+||| +..|+|||||++|++++..|.+|++|||++
T Consensus 149 -~d~iy~VMe~~EhDLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH-~~wilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 149 -MDKIYIVMEYVEHDLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLH-DNWILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred -cceeeeeHHHHHhhHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHh-hceeEecccchhheeeccCCcEEecccchh
Confidence 34799999999 589999887652 2233446777999999999999 599999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcccc-ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhcc--
Q 004025 177 SEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT-- 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~~-- 249 (778)
+.+... ...+ ..+++..|+|||++.+. ..|+.++||||+||++.|++.+.|+|... ++..+
T Consensus 225 R~ygsp-------~k~~T~lVVTLWYRaPELLLG~-----~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~ 292 (419)
T KOG0663|consen 225 REYGSP-------LKPYTPLVVTLWYRAPELLLGA-----KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFK 292 (419)
T ss_pred hhhcCC-------cccCcceEEEeeecCHHHhcCC-----cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHH
Confidence 998763 2233 33567799999999986 67899999999999999999999988532 22111
Q ss_pred --------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+...-.+++..||..||++|.|+.+.|+|.
T Consensus 293 llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 293 LLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred HhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 01224456788999999999999999999996
No 17
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-36 Score=336.51 Aligned_cols=245 Identities=18% Similarity=0.269 Sum_probs=209.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC-CCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT-NAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~-~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-||.+|+.+|.|+ | .|..|++..+|+.+|||++.+. ...+.....+.+|+-+||.|.||||+++||++++
T Consensus 12 GpwkLgkTLG~Gstg--~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~------ 83 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTG--CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN------ 83 (786)
T ss_pred cceeccccccCCCCc--eehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc------
Confidence 4799999999999 8 8999999999999999999986 3344556678899999999999999999999997
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
+.++|+|.||+ |.|+++|-.++..... + -+.++.||+.|+.|||. .+|+||||||+|++++.++++||+|||
T Consensus 84 --~~~lylvlEyv~gGELFdylv~kG~l~e~--e-aa~ff~QIi~gv~yCH~-~~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 84 --KQHLYLVLEYVPGGELFDYLVRKGPLPER--E-AAHFFRQILDGVSYCHA-FNICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred --CceEEEEEEecCCchhHHHHHhhCCCCCH--H-HHHHHHHHHHHHHHHhh-hcceeccCCchhhhhhcccCEeeeccc
Confidence 45999999999 5799988887654332 2 23449999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----- 249 (778)
++..-..+ .+ --..++.++|.+||++.+. .+.+.++|+||.|+++|.|++|+.||++++++.+
T Consensus 158 MAsLe~~g------kl-LeTSCGSPHYA~PEIV~G~-----pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~ 225 (786)
T KOG0588|consen 158 MASLEVPG------KL-LETSCGSPHYAAPEIVSGR-----PYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ 225 (786)
T ss_pred eeecccCC------cc-ccccCCCcccCCchhhcCC-----CCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 99765442 12 2234677899999999984 5677899999999999999999999998877653
Q ss_pred -------CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 250 -------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 250 -------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
..||...++++++||..||.+|++.+++++|| |+.+|-.-
T Consensus 226 ~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP----~l~g~~~~ 272 (786)
T KOG0588|consen 226 RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP----FLSGYTSL 272 (786)
T ss_pred cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc----hhhcCCCC
Confidence 46778889999999999999999999999999 77766543
No 18
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=326.27 Aligned_cols=244 Identities=21% Similarity=0.291 Sum_probs=201.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e 91 (778)
..-+|.+++.+|.|. | +|+.|++..+|..||||+++++... ....+.+.+|+.+++.++ ||||+++++++++.
T Consensus 15 ~~g~y~~~~~lG~Gsfg--kV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFG--KVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccCceeeeeeecCCCCe--eEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 345799999999998 8 9999999999999999988875221 234567889999999999 99999999999985
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDW 168 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~ 168 (778)
+ .+||||||| +.|.+++.+.+... +...+.+++||+.|+.|||+ .+|+||||||+||+++.+ +++
T Consensus 93 ~--------~~~ivmEy~~gGdL~~~i~~~g~l~---E~~ar~~F~Qlisav~y~H~-~gi~HRDLK~ENilld~~~~~~ 160 (370)
T KOG0583|consen 93 T--------KIYIVMEYCSGGDLFDYIVNKGRLK---EDEARKYFRQLISAVAYCHS-RGIVHRDLKPENILLDGNEGNL 160 (370)
T ss_pred C--------eEEEEEEecCCccHHHHHHHcCCCC---hHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEecCCCCCE
Confidence 4 799999999 48999998855432 24456679999999999996 899999999999999999 999
Q ss_pred EEEecccccccC-CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh
Q 004025 169 KLHAFDVLSEFD-GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (778)
Q Consensus 169 KL~dFgla~~~~-~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~ 247 (778)
||+|||++.... ... .....++.+.|+|||++.+.+ .....++|+||+|+++|.|++|..||+.....
T Consensus 161 Kl~DFG~s~~~~~~~~-------~l~t~cGsp~Y~aPEvl~~~~----~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~ 229 (370)
T KOG0583|consen 161 KLSDFGLSAISPGEDG-------LLKTFCGSPAYAAPEVLSGKG----TYSGKAADVWSLGVILYVLLCGRLPFDDSNVP 229 (370)
T ss_pred EEeccccccccCCCCC-------cccCCCCCcccCCHHHhCCCC----CcCCchhhhhhhHHHHHHHHhCCCCCCCccHH
Confidence 999999998874 211 122346777999999998742 13468999999999999999999999875532
Q ss_pred --------ccCCCCcch-----HHHHHHHhccCCCCCCChHHHHhcccCCccccc
Q 004025 248 --------NTASIPKSL-----LPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTE 289 (778)
Q Consensus 248 --------~~~~iP~~L-----~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ 289 (778)
....+|..+ ..++.+||..||.+|+++.++++|+ |++.
T Consensus 230 ~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~----w~~~ 280 (370)
T KOG0583|consen 230 NLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHP----WFQK 280 (370)
T ss_pred HHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhCh----hhcc
Confidence 224555554 8889999999999999999999998 6654
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=313.50 Aligned_cols=245 Identities=19% Similarity=0.255 Sum_probs=204.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.||.|. + +||.|+.+..++.||||+++....++. +..+++|++.|+.++||||++++.+|..++
T Consensus 24 n~~~YeL~e~IG~G~sa--~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--- 97 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASA--VVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDS--- 97 (516)
T ss_pred CccceeEEEEEecccee--EeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecc---
Confidence 345799999999998 6 899999999999999999998765554 788999999999999999999999999854
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+|+||.|+ |++.+.++..-..+ ..+..|+.+++++++||.|||. .|.||||||+.||+|+.+|.+||+||
T Consensus 98 -----~LWvVmpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~-~G~IHRdvKAgnILi~~dG~VkLadF 170 (516)
T KOG0582|consen 98 -----ELWVVMPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQ-NGHIHRDVKAGNILIDSDGTVKLADF 170 (516)
T ss_pred -----eeEEeehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHh-cCceecccccccEEEcCCCcEEEcCc
Confidence 899999998 78999998865444 3455688889999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccc-cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------- 245 (778)
|....+...+.. .... ..+.+.+.||+||++.... .+|+.++||||||+...|+.+|..||....
T Consensus 171 gvsa~l~~~G~R---~~~rf~tfvgtp~wmAPEvl~q~~----~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~ 243 (516)
T KOG0582|consen 171 GVSASLFDSGDR---QVTRFNTFVGTPCWMAPEVLMQQL----HGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL 243 (516)
T ss_pred eeeeeecccCce---eeEeeccccCcccccChHHhhhcc----cCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH
Confidence 998877664421 2222 3345667999999955432 589999999999999999999998885321
Q ss_pred -hh--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -LR--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l~--------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++ +...++++++.++..||..||.+||+++++|+|+
T Consensus 244 tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~ 294 (516)
T KOG0582|consen 244 TLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA 294 (516)
T ss_pred HhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence 11 1124556788999999999999999999999997
No 20
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.3e-35 Score=306.91 Aligned_cols=247 Identities=20% Similarity=0.300 Sum_probs=201.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC-eeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN-ILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn-Ilk~~d~~e~e~~~g 95 (778)
...|+..+++|+|+ | +||+|+.+.+|+.||+|++......+.....+.+|+.+|+.|+|+| |+.++|++.+++..+
T Consensus 10 ~~~~~~~eklGeGtyg--~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYG--VVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHHhCCCCce--EEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence 34688899999999 8 9999999999999999999987665656667889999999999999 999999998765211
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
+ ...+|+|+||+ .+|..++...... .......|+.+++||+.||.|||+ .+|+||||||+||+|+++|.+||+||
T Consensus 88 ~--~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~-~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 88 G--IGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS-HGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred c--cceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCcceEEECCCCcEeeecc
Confidence 1 24899999999 6899999987642 112236788889999999999996 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccc-cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc
Q 004025 174 DVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~ 248 (778)
|+++.+.- ++..+. -.++..|+|||++.+. ..|+..+||||+||+++||++++++|... ++..
T Consensus 165 GlAra~~i-------p~~~yt~evvTlWYRaPEvLlGs-----~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~ 232 (323)
T KOG0594|consen 165 GLARAFSI-------PMRTYTPEVVTLWYRAPEVLLGS-----TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR 232 (323)
T ss_pred chHHHhcC-------CcccccccEEEeeccCHHHhcCC-----CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 99996653 222232 2445589999999885 57889999999999999999999988542 1111
Q ss_pred c-----------------------------------CCCC---cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T-----------------------------------ASIP---KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~-----------------------------------~~iP---~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ..+| ....+++.+||..+|.+|.|+...++|+
T Consensus 233 If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~ 303 (323)
T KOG0594|consen 233 IFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHP 303 (323)
T ss_pred HHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcCh
Confidence 0 0112 2567788999999999999999999997
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=325.39 Aligned_cols=236 Identities=18% Similarity=0.232 Sum_probs=203.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+...|+.-+++|.|. | .||.++...+++.|+||.++..... ..+.+.||+.+|+.++||||++|++.|-..
T Consensus 271 P~~~y~~~~kigqgaSG--~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv~---- 342 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATG--GVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLVG---- 342 (550)
T ss_pred hhhhhcchhhhcccccc--ceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhccc----
Confidence 667899999999999 8 8999999999999999999986543 356899999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+++||||+ ++|.+.+....+. +..|+.++++++.||+|||+ .+|+|||||.+||+++.+|.+||+||
T Consensus 343 ----deLWVVMEym~ggsLTDvVt~~~~~----E~qIA~Icre~l~aL~fLH~-~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 343 ----DELWVVMEYMEGGSLTDVVTKTRMT----EGQIAAICREILQGLKFLHA-RGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred ----ceeEEEEeecCCCchhhhhhccccc----HHHHHHHHHHHHHHHHHHHh-cceeeeccccceeEeccCCcEEEeee
Confidence 3899999999 5798888876543 45577889999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC-hhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK-TEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~-~~~l------ 246 (778)
|+|..+..... .+...++++.|||||++.. ..|..++||||||+++.||+-|.+||- ...+
T Consensus 414 GFcaqi~~~~~------KR~TmVGTPYWMAPEVvtr------k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI 481 (550)
T KOG0578|consen 414 GFCAQISEEQS------KRSTMVGTPYWMAPEVVTR------KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 481 (550)
T ss_pred eeeeccccccC------ccccccCCCCccchhhhhh------cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence 99998876432 2333456678999999876 578899999999999999999998874 2222
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++...+...+++++.+||..|+.+|+++.+||+|+
T Consensus 482 a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 482 ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHP 524 (550)
T ss_pred hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence 23356777899999999999999999999999998
No 22
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=295.68 Aligned_cols=236 Identities=16% Similarity=0.243 Sum_probs=198.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.-.+|++...+|.|+ | +|+.++.+.+|.-+|+|++++...-. .+.+...||.++|+.+.||.+++++.++.+.
T Consensus 42 ~l~dfe~~~tlGtGSFG--rV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~--- 116 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFG--RVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN--- 116 (355)
T ss_pred chhhhhheeeeccCccc--eEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC---
Confidence 345789999999999 9 99999999999999999999754333 5678889999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||+ +.|..+|++.+...... .+.+..||+.||.|||+ +.|++|||||+||+++.+|.+||.|
T Consensus 117 -----~~lymvmeyv~GGElFS~Lrk~~rF~e~~---arFYAAeivlAleylH~-~~iiYRDLKPENiLlD~~G~iKitD 187 (355)
T KOG0616|consen 117 -----SNLYMVMEYVPGGELFSYLRKSGRFSEPH---ARFYAAEIVLALEYLHS-LDIIYRDLKPENLLLDQNGHIKITD 187 (355)
T ss_pred -----CeEEEEEeccCCccHHHHHHhcCCCCchh---HHHHHHHHHHHHHHHHh-cCeeeccCChHHeeeccCCcEEEEe
Confidence 4999999999 57999999876543333 34459999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc---
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT--- 249 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~--- 249 (778)
||++..+.+. .+..++++.|+|||++.+ +.+..++|.|+||+|||||+.|.+||..++...+
T Consensus 188 FGFAK~v~~r---------T~TlCGTPeYLAPEii~s------k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~K 252 (355)
T KOG0616|consen 188 FGFAKRVSGR---------TWTLCGTPEYLAPEIIQS------KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEK 252 (355)
T ss_pred ccceEEecCc---------EEEecCCccccChHHhhc------CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHH
Confidence 9999988762 344567789999999987 6888999999999999999999999865543221
Q ss_pred -----CCCC----cchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 -----ASIP----KSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 -----~~iP----~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..+| ..+.+++++||+.|-.+|. ...++..|+
T Consensus 253 I~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~ 298 (355)
T KOG0616|consen 253 ILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHP 298 (355)
T ss_pred HHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCc
Confidence 2344 4678889999999999994 345777786
No 23
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.7e-34 Score=313.90 Aligned_cols=246 Identities=19% Similarity=0.268 Sum_probs=192.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | .||.|+++.+|..|+||.+............+.+|+++|+.++||||+++++++...... .
T Consensus 1 ry~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~---~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYG--VVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR---E 75 (338)
T ss_pred CeEEEEEEeecCCe--EEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC---C
Confidence 599999999998 8 899999999999999999875433333345678999999999999999999988654321 1
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 76 FKDIYVVFELMESDLHQVIKANDD---LTPEHHQFFLYQLLRALKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred CceEEEEEecCCCCHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 24689999999 578888876432 2344566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ ........++..|+|||++.+.. ..++.++|+|||||++|||++|.+||......
T Consensus 152 ~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~----~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 224 (338)
T cd07859 152 VAFNDTPT---AIFWTDYVATRWYRAPELCGSFF----SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL 224 (338)
T ss_pred ccccccCc---cccccCCCCCCCcCCHHHHhccc----cccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence 65432111 11112234556899999976421 24667999999999999999999888432100
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 0123556678999999999999999999999998
No 24
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.9e-34 Score=306.67 Aligned_cols=240 Identities=18% Similarity=0.253 Sum_probs=189.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|. | +||.|+++.+++.|+||++....... ....+.+|+.+++.++||||++++++++++
T Consensus 3 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 75 (303)
T cd07869 3 KADSYEKLEKLGEGSYA--TVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIVLLHDIIHTK---- 75 (303)
T ss_pred ccccceEeeeEEecCCE--EEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCcCeEEEEEecC----
Confidence 346799999999998 8 99999999999999999997543222 234577899999999999999999999864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++..... ....+.+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 76 ----~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg 148 (303)
T cd07869 76 ----ETLTLVFEYVHTDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQ-RYILHRDLKPQNLLISDTGELKLADFG 148 (303)
T ss_pred ----CeEEEEEECCCcCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECCCC
Confidence 4899999999 678887765431 12344567779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hhhcc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRNT 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l~~~ 249 (778)
++......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||... .+..+
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~ 217 (303)
T cd07869 149 LARAKSVPSHT------YSNEVVTLWYRPPDVLLGS-----TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI 217 (303)
T ss_pred cceeccCCCcc------CCCCcccCCCCChHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence 98765432110 1122345689999997653 34667899999999999999999888531 11000
Q ss_pred ----------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ----------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ----------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+||+.||++|+|+.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~ 289 (303)
T cd07869 218 FLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE 289 (303)
T ss_pred HHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence 01234567889999999999999999999998
No 25
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.3e-34 Score=303.76 Aligned_cols=238 Identities=18% Similarity=0.255 Sum_probs=190.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | +||+|+++.+++.|+||++......+...+.+.+|+.++++++||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 72 (287)
T cd07848 2 KFEVLGVVGEGAYG--VVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR------- 72 (287)
T ss_pred CceEEEEecccCCE--EEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC-------
Confidence 699999999998 8 899999999999999999986544444566788999999999999999999999864
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+||||||+ +.+...+.... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~ 148 (287)
T cd07848 73 -GKLYLVFEYVEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHK-NDIVHRDIKPENLLISHNDVLKLCDFGFAR 148 (287)
T ss_pred -CEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence 3899999999 44444444322 123345567779999999999995 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---c--
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---N-- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~---~-- 248 (778)
.+....... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||..... . .
T Consensus 149 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 217 (287)
T cd07848 149 NLSEGSNAN-----YTEYVATRWYRSPELLLG------APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL 217 (287)
T ss_pred ccccccccc-----ccccccccccCCcHHHcC------CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh
Confidence 764321110 111234568999999876 3567899999999999999999988853210 0 0
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp 285 (287)
T cd07848 218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285 (287)
T ss_pred CCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence 012455688999999999999999999999998
No 26
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.9e-34 Score=303.77 Aligned_cols=238 Identities=18% Similarity=0.260 Sum_probs=189.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.++..|+||++...... .....+.+|+++++.++||||+++++++.++
T Consensus 5 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 75 (288)
T cd07871 5 ETYVKLDKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTE------ 75 (288)
T ss_pred ccceEeeEEecCCCE--EEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCC------
Confidence 4699999999998 8 8999999999999999999754322 2234577899999999999999999999864
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|..++...+.. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 76 --RCLTLVFEYLDSDLKQYLDNCGNL--MSMHNVKIFMFQLLRGLSYCHK-RKILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred --CeEEEEEeCCCcCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEECcCcce
Confidence 3899999999 5788888764321 2234456679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||.......
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 219 (288)
T cd07871 151 RAKSVPTKT------YSNEVVTLWYRPPDVLLGS-----TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRL 219 (288)
T ss_pred eeccCCCcc------ccCceecccccChHHhcCC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 765432110 1112345689999998653 356789999999999999999998875321100
Q ss_pred ----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+|+|+.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp 286 (288)
T cd07871 220 LGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS 286 (288)
T ss_pred hCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCC
Confidence 012345678899999999999999999999998
No 27
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.5e-34 Score=308.68 Aligned_cols=233 Identities=16% Similarity=0.185 Sum_probs=190.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ....+.+.+|+.+|+.++||||+++++.++++
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 73 (291)
T cd05612 2 DLERIKTVGTGTFG--RVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ------ 73 (291)
T ss_pred CceeeeeeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC------
Confidence 699999999998 8 9999999999999999999754322 13456788999999999999999999998763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+||||+ ++|.+++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 74 --RFLYMLMEYVPGGELFSYLRNSGR---FSNSTGLFYASEIVCALEYLHS-KEIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred --CeEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEEEecCc
Confidence 4899999999 579999876543 2234456669999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+....... ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 148 ~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~ 212 (291)
T cd05612 148 AKKLRDRT---------WTLCGTPEYLAPEVIQS------KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA 212 (291)
T ss_pred chhccCCc---------ccccCChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 88764321 11234568999999876 35678999999999999999999988643211
Q ss_pred cc----CCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 NT----ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 ~~----~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
.. ..++..+.+++++||..||.+|++ +.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 213 GKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred CCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 11 234556889999999999999995 99999998
No 28
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.3e-34 Score=311.72 Aligned_cols=254 Identities=16% Similarity=0.240 Sum_probs=206.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+.-.+|++...||.|+ | .||.|++|.+|..||+|++.++..-. .+++.++.|-.+|....+|+||+++.+|.+
T Consensus 138 ~~~~DFe~Lk~IgkGAfG--eVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD--- 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFG--EVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD--- 212 (550)
T ss_pred CCcccchhheeeccccce--eEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC---
Confidence 3456799999999999 9 99999999999999999999875433 567889999999999999999999999987
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
+.++|+||||+ |++..+|...+.. .+++.+.++.+++.|+..||. .|+|||||||+|++|+..|++||.
T Consensus 213 -----~~~LYLiMEylPGGD~mTLL~~~~~L---~e~~arfYiaE~vlAI~~iH~-~gyIHRDIKPdNlLiD~~GHiKLS 283 (550)
T KOG0605|consen 213 -----KEYLYLIMEYLPGGDMMTLLMRKDTL---TEDWARFYIAETVLAIESIHQ-LGYIHRDIKPDNLLIDAKGHIKLS 283 (550)
T ss_pred -----CCeeEEEEEecCCccHHHHHHhcCcC---chHHHHHHHHHHHHHHHHHHH-cCcccccCChhheeecCCCCEeec
Confidence 45999999999 6899999887653 355667779999999999994 999999999999999999999999
Q ss_pred ecccccccCCCC---------------------CCCC--C------------------CccccccccCCCCCCccccccc
Q 004025 172 AFDVLSEFDGNN---------------------EAAN--G------------------PMLQYAWLVGAQYKPVELAKSD 210 (778)
Q Consensus 172 dFgla~~~~~~~---------------------~~~~--~------------------~~~~~~~~~~~~Y~aPE~~~~~ 210 (778)
|||+|..+.... +... . ..+.+..++++.|+|||++.+
T Consensus 284 DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~- 362 (550)
T KOG0605|consen 284 DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG- 362 (550)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-
Confidence 999986543200 0000 0 111234467789999999998
Q ss_pred cccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc----------------CCCCcchHHHHHHHhccCCCCCCC-
Q 004025 211 WTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----------------ASIPKSLLPDYQRLLSSMPSRRLN- 273 (778)
Q Consensus 211 ~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----------------~~iP~~L~~~i~~lL~~dP~~Rps- 273 (778)
.+|...+|+|||||+||||+.|-|||..+....+ ..+.....+++.+||. ||..|+.
T Consensus 363 -----kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 363 -----KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred -----CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 5789999999999999999999999987654322 2344567889999999 9999986
Q ss_pred --hHHHHhcccCCccccccccchhhhh
Q 004025 274 --SSKLIENSVGDFWMTEYFQNKLVDT 298 (778)
Q Consensus 274 --~~~lL~~~~~~~w~~~ff~n~lv~~ 298 (778)
++++.+|| ||...-.+.
T Consensus 437 ~G~~EIK~HP--------fF~~v~W~~ 455 (550)
T KOG0605|consen 437 KGAEEIKKHP--------FFKGVDWDH 455 (550)
T ss_pred ccHHHHhcCC--------ccccCCcch
Confidence 78999998 666544433
No 29
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=312.78 Aligned_cols=237 Identities=15% Similarity=0.212 Sum_probs=193.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..-.+|++.+.||.|+ | +||+|+++.+|+.|+||++.+... .....+.+.+|+.+|+.++||||+++++.++.+
T Consensus 15 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 90 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFG--RVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE-- 90 (329)
T ss_pred CCchheEEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC--
Confidence 3456799999999998 8 999999999999999999975422 123456788999999999999999999999864
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+|+||||+ ++|.+++..... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 91 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kl~ 160 (329)
T PTZ00263 91 ------NRVYFLLEFVVGGELFTHLRKAGR---FPNDVAKFYHAELVLAFEYLHS-KDIIYRDLKPENLLLDNKGHVKVT 160 (329)
T ss_pred ------CEEEEEEcCCCCChHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEECCCCCEEEe
Confidence 4899999999 579888876543 2344566679999999999995 999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~ 247 (778)
|||++....... ....++..|+|||++.+ ..++.++|+|||||++|||++|..||..... .
T Consensus 161 Dfg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~ 225 (329)
T PTZ00263 161 DFGFAKKVPDRT---------FTLCGTPEYLAPEVIQS------KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE 225 (329)
T ss_pred eccCceEcCCCc---------ceecCChhhcCHHHHcC------CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 999998764321 11234568999999876 3567899999999999999999998854321 1
Q ss_pred ----cc----CCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 ----NT----ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 ----~~----~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
.. ..++..+.+++++||..||.+|++ +.++++|+
T Consensus 226 ~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 226 KILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred HHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 11 224566889999999999999997 79999998
No 30
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=311.01 Aligned_cols=258 Identities=16% Similarity=0.203 Sum_probs=198.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------hHHHHHHHHHHHHhcCCCCCeeeEe
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------GHLAAARNGVKRLRTVRHPNILAFL 85 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------------~~~~~~~~ev~~Lk~LrHPnIlk~~ 85 (778)
..|++.+.+|.|. | .|-.|++..+++.||||++.++.... ...+..++||.+||+|+||||++++
T Consensus 97 Nqy~l~~eiG~G~yG--kVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYG--KVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred hheehhhhhcCCccc--eEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4699999999999 9 89999999999999999999753211 2346889999999999999999999
Q ss_pred eeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc
Q 004025 86 HSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 86 d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~ 163 (778)
+++.+... .++|||+||| +++.+.=... .......-+.++..++.||.|||. .+||||||||+|++++
T Consensus 175 EvLDDP~s------~~~YlVley~s~G~v~w~p~d~---~els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 175 EVLDDPES------DKLYLVLEYCSKGEVKWCPPDK---PELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLLS 244 (576)
T ss_pred EeecCccc------CceEEEEEeccCCccccCCCCc---ccccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEEc
Confidence 99987663 4999999999 4443221111 112223344559999999999995 8999999999999999
Q ss_pred CCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 164 ~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
++|.+||+|||.+.............. -....+++.|+|||++.++-. ......+.|+|+||++||.|+.|+.||-.
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~-L~~tvGTPAF~APE~c~~~~~--~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQ-LSRTVGTPAFFAPELCSGGNS--FSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHH-HhhcCCCccccchHhhcCCCC--ccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 999999999999887643221111111 112467779999999877422 13456799999999999999999988865
Q ss_pred hhhhc--------cC------CCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchh
Q 004025 244 EELRN--------TA------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKL 295 (778)
Q Consensus 244 ~~l~~--------~~------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~l 295 (778)
+.... .. .+...+.+++++||.+||.+|+++.++..|+ |....+..+.
T Consensus 322 ~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp----wvt~~g~~~~ 383 (576)
T KOG0585|consen 322 DFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP----WVTRDGDSPQ 383 (576)
T ss_pred chHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc----eeccCCCCCc
Confidence 43211 11 2345688999999999999999999999999 8877776653
No 31
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=303.98 Aligned_cols=241 Identities=18% Similarity=0.266 Sum_probs=196.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|+-.+.+|.|. | .||+|+..++++.||||..-.... .-.+|+++|+.++||||++++.+|......
T Consensus 22 ~~i~~~~~~liG~GsFg--~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~- 92 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFG--VVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTES- 92 (364)
T ss_pred eEEEEEeeEEEeecccc--eEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCC-
Confidence 345688899999999 9 999999999999999999864321 234789999999999999999999764421
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCC-cchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcEEEEe
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGS-QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~-~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~KL~d 172 (778)
..-++.+||||+ ..|.++++....... .....++.+.+||++||.|||+ .+|+||||||.||+||.+ |.+||||
T Consensus 93 --d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~-~~IcHRDIKPqNlLvD~~tg~LKicD 169 (364)
T KOG0658|consen 93 --DEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS-HGICHRDIKPQNLLVDPDTGVLKICD 169 (364)
T ss_pred --chhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh-cCcccCCCChheEEEcCCCCeEEecc
Confidence 134778999999 689999986422111 1223477779999999999996 999999999999999955 9999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~ 248 (778)
||.++.+..... ...+.++..|+|||++.+. ..|+.++|+||.||+|.||+-|+++|.++ ++..
T Consensus 170 FGSAK~L~~~ep-------niSYicSRyYRaPELifga-----~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~e 237 (364)
T KOG0658|consen 170 FGSAKVLVKGEP-------NISYICSRYYRAPELIFGA-----TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVE 237 (364)
T ss_pred CCcceeeccCCC-------ceeEEEeccccCHHHHcCc-----cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHH
Confidence 999998876422 2345677789999999986 68999999999999999999999998643 2211
Q ss_pred -------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|+++.+++.++|..+|.+|.++.+++.|+
T Consensus 238 Iik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 238 IIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred HHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 024677888999999999999999999999997
No 32
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-34 Score=301.43 Aligned_cols=240 Identities=21% Similarity=0.312 Sum_probs=203.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|+|.+.+|.|. | +|-+++....|+.||||.+.+....+ ..+-.+++|+++|..|+||||+.+|++||..
T Consensus 53 HRyE~~etLGkGTYG--KVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk----- 125 (668)
T KOG0611|consen 53 HRYEITETLGKGTYG--KVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK----- 125 (668)
T ss_pred hHHHHHHHhcCCccc--ceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC-----
Confidence 4899999999999 9 99999999999999999998765443 5677899999999999999999999999973
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+.|||||. +.|++|+.+++.... ..-..++.||+.|+.|+| +.+++|||||.+||+++.++++||+|||
T Consensus 126 ---dKIvivMEYaS~GeLYDYiSer~~LsE---rEaRhfFRQIvSAVhYCH-knrVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 126 ---DKIVIVMEYASGGELYDYISERGSLSE---REARHFFRQIVSAVHYCH-KNRVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred ---ceEEEEEEecCCccHHHHHHHhccccH---HHHHHHHHHHHHHHHHHh-hccceecccchhheeecCCCCeeeeccc
Confidence 4899999999 689999998875433 234556999999999999 5999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----c-
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----T- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~----~- 249 (778)
++..+.+.. +...+++.+.|.+||++.+. ..-...+|.||||+|+|.|..|..||+..+... +
T Consensus 199 LSNly~~~k-------fLqTFCGSPLYASPEIvNG~-----PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs 266 (668)
T KOG0611|consen 199 LSNLYADKK-------FLQTFCGSPLYASPEIVNGT-----PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQIS 266 (668)
T ss_pred hhhhhcccc-------HHHHhcCCcccCCccccCCC-----CCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhh
Confidence 988776532 23345777899999999884 344568999999999999999999998754332 2
Q ss_pred ------CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccc
Q 004025 250 ------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMT 288 (778)
Q Consensus 250 ------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~ 288 (778)
..-|....-+++.||-.||.+|.++.++-.| ||+.
T Consensus 267 ~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH----WWvN 307 (668)
T KOG0611|consen 267 RGAYREPETPSDASGLIRWMLMVNPERRATIEDIASH----WWVN 307 (668)
T ss_pred cccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhh----heee
Confidence 2456778889999999999999999999888 3665
No 33
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=307.94 Aligned_cols=239 Identities=19% Similarity=0.198 Sum_probs=189.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCc-EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSP-VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~-VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+..+++.+|.|+ | +||+|..+ |+. |+||++......+...+.+.+|+.+|++|+|||||+|++++....
T Consensus 42 ~l~~~~~iG~G~~g--~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----- 112 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFG--TVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----- 112 (362)
T ss_pred HhhhhhhcccCCce--eEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----
Confidence 456677789998 8 99999997 666 999999876555544778999999999999999999999998631
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC-ccccccCCCCeEEcCCC-cEEEEec
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-LVHGNVCLSSVVVTQTL-DWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-ivH~dLkp~NI~v~~~g-~~KL~dF 173 (778)
..++|||||+ ++|..+|..... .......+..++.||++||.|||+ ++ |||||||++||+|+.++ .+||+||
T Consensus 113 --~~~~iVtEy~~~GsL~~~l~~~~~-~~l~~~~~l~~aldiArGm~YLH~-~~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 113 --GSLCIVTEYMPGGSLSVLLHKKRK-RKLPLKVRLRIALDIARGMEYLHS-EGPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred --CceEEEEEeCCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhc-CCCeeecccChhhEEEcCCCCEEEECCC
Confidence 2689999999 689999987411 111222234459999999999996 78 99999999999999998 9999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|+++...... .......++..|||||++.+. ...++.++|+||||+++|||++|..||......
T Consensus 189 Glsr~~~~~~------~~~~~~~GT~~wMAPEv~~~~----~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v 258 (362)
T KOG0192|consen 189 GLSREKVISK------TSMTSVAGTYRWMAPEVLRGE----KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV 258 (362)
T ss_pred ccceeecccc------ccccCCCCCccccChhhhcCC----CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 9998776531 001112445699999999953 257899999999999999999999888643211
Q ss_pred ----c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|+.+..++.+||+.||.+||++.+++...
T Consensus 259 ~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 259 VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence 1 123677899999999999999999999887643
No 34
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-34 Score=302.78 Aligned_cols=243 Identities=19% Similarity=0.287 Sum_probs=194.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|..++.+|.|. | +||.++++++|..+|||........ ..+.+.+|+++|+.|+|||||++++......
T Consensus 16 ~~~~~~~~~lG~Gs~G--~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~---- 87 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFG--SVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRE---- 87 (313)
T ss_pred cchhhhhccccCccce--EEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCcccccc----
Confidence 35699999999998 8 9999999999999999999876322 2677999999999999999999999754422
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEec
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAF 173 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dF 173 (778)
...++|.|||+ ++|.+++++.+. ...+..++....||++||.|||+ .++|||||||+||+|+. +|.+||+||
T Consensus 88 --~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs-~g~vH~DiK~~NiLl~~~~~~~KlaDF 162 (313)
T KOG0198|consen 88 --NDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS-KGIVHCDIKPANILLDPSNGDVKLADF 162 (313)
T ss_pred --CeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCEeccCcccceEEEeCCCCeEEeccC
Confidence 12699999999 689999998763 23455677889999999999995 99999999999999999 799999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----h--h-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----E--L- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~--l- 246 (778)
|++......... .-......+++.||+||++.++ .....++|+|||||++.||++|.+|+... . +
T Consensus 163 G~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g-----~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ 234 (313)
T KOG0198|consen 163 GLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNG-----EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLL 234 (313)
T ss_pred cccccccccccc---ccccccccCCccccCchhhcCC-----CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHH
Confidence 999877641111 1112234566799999999853 12235899999999999999999887641 0 0
Q ss_pred ----hccCCCCc----chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----RNTASIPK----SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----~~~~~iP~----~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....||. ...+++.+|+..+|..|||+.++|+|+
T Consensus 235 ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 235 IGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred HhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 01234444 457778999999999999999999998
No 35
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.4e-33 Score=307.66 Aligned_cols=230 Identities=17% Similarity=0.232 Sum_probs=185.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
.||.|+ | +||+|+++.+|+.|+||++.+... .......+.+|+++|+.++||||+++++.++.. .++|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--------~~~~ 71 (323)
T cd05571 2 LLGKGTFG--KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH--------DRLC 71 (323)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC--------CEEE
Confidence 577887 8 999999999999999999986422 223445678899999999999999999999864 4899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|..++..... .....+.+++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~-~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 147 (323)
T cd05571 72 FVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALGYLHS-CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc
Confidence 999999 478888876542 2344566779999999999995 9999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------c
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------T 249 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------~ 249 (778)
... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||....... .
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p 215 (323)
T cd05571 148 DGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 215 (323)
T ss_pred CCC------cccceecCccccChhhhcC------CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 111 0112345668999999876 357789999999999999999998885432111 1
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..++..+.+++++||..||.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~ 252 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR 252 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence 34667788999999999999999 899999998
No 36
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.6e-33 Score=296.29 Aligned_cols=240 Identities=18% Similarity=0.258 Sum_probs=192.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|. | +||+|+++.++..|+||++......+.....+.+|+.++++++||||+++++.+..+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (285)
T cd07861 1 DYTKIEKIGEGTYG--VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE------- 71 (285)
T ss_pred CceEeeEecccCce--EEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-------
Confidence 589999999997 7 899999999999999999976544444456788999999999999999999999864
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 72 -SRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS-RRVLHRDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred -CeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEEcCCCcEEECccccee
Confidence 3899999999 6788887664432333445566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----------- 246 (778)
........ .....+...|+|||++.+. ..++.++|+|||||++|+|++|+++|.....
T Consensus 150 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~ 218 (285)
T cd07861 150 AFGIPVRV------YTHEVVTLWYRAPEVLLGS-----PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRIL 218 (285)
T ss_pred ecCCCccc------ccCCcccccccChHHhcCC-----CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence 65432110 0111334589999987653 2456789999999999999999988753210
Q ss_pred ------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..||.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~ 283 (285)
T cd07861 219 GTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHP 283 (285)
T ss_pred CCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCC
Confidence 00123567778899999999999999999999997
No 37
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.3e-33 Score=296.49 Aligned_cols=242 Identities=19% Similarity=0.282 Sum_probs=185.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEecccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~-~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~~~ 94 (778)
+|++.+.||.|+ | +||+|++.. ++..|+||.+......+.....+.+|+..++.+ +||||+++++++.....+
T Consensus 2 ~Y~~~~~lg~G~~g--~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 2 QYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CcceeeEeccCCCe--EEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 699999999998 8 999999854 468899999986544333333455666666655 699999999988632211
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
....+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 80 ---~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~-~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 ---RETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred ---CCCcEEEEEccCCCCHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 134799999999 67888887643222 2344567779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~- 248 (778)
|++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.++|.... +..
T Consensus 155 g~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i 221 (290)
T cd07862 155 GLARIYSFQM-------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 221 (290)
T ss_pred cceEeccCCc-------ccccccccccccChHHHhC------CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence 9987664321 1112234568999999865 356778999999999999999999885321 000
Q ss_pred ----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|++||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp 288 (290)
T cd07862 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 288 (290)
T ss_pred HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCC
Confidence 023455678899999999999999999999998
No 38
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=288.05 Aligned_cols=238 Identities=16% Similarity=0.221 Sum_probs=196.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
++...|++-+.||.|. + .||++.++.+|+.+++|+++.+.......+.+.+|+++.+.|+||||+++++++..+.
T Consensus 8 ~f~d~y~l~e~igkG~FS--vVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~-- 83 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-- 83 (355)
T ss_pred ccchhhhHHHHHccCchH--HHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc--
Confidence 4567899999999998 7 8999999999999999999976655556788999999999999999999999998753
Q ss_pred cCCcccEEEEEecCCc--ChHH-HHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC---CcE
Q 004025 95 ATSTKITIYIVTEPVM--PLSE-KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDW 168 (778)
Q Consensus 95 g~~~~~~lyIVtE~v~--~L~~-~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~---g~~ 168 (778)
+.|||+|++. +|.. .+++.- ..+......+.||++||.|+|. .+|||||+||+|+++-.. .-+
T Consensus 84 ------~~ylvFe~m~G~dl~~eIV~R~~----ySEa~aSH~~rQiLeal~yCH~-n~IvHRDvkP~nllLASK~~~A~v 152 (355)
T KOG0033|consen 84 ------FHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILEALAYCHS-NGIVHRDLKPENLLLASKAKGAAV 152 (355)
T ss_pred ------eeEEEEecccchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeeeeccCCCce
Confidence 8999999993 5654 444321 1122245669999999999995 999999999999999633 359
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-- 246 (778)
||+|||++..+.+. .....+.++++||+||+++. ..++..+|||+.|+++|-++.|.+||..+..
T Consensus 153 KL~~FGvAi~l~~g-------~~~~G~~GtP~fmaPEvvrk------dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r 219 (355)
T KOG0033|consen 153 KLADFGLAIEVNDG-------EAWHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 219 (355)
T ss_pred eecccceEEEeCCc-------cccccccCCCcccCHHHhhc------CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH
Confidence 99999999988731 12334567789999999987 4788899999999999999999999865321
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....|.++..+++++||..||.+|+++.+.|+|+
T Consensus 220 lye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 220 LYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred HHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCc
Confidence 12246777899999999999999999999999999
No 39
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.8e-33 Score=306.59 Aligned_cols=248 Identities=19% Similarity=0.260 Sum_probs=194.0
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | +||.|+++.+|..|+||++............+.+|+.+++.++||||+++++++......
T Consensus 20 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 95 (359)
T cd07876 20 LKRYQQLKPIGSGAQG--IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL-- 95 (359)
T ss_pred hhceEEEEEeecCCCE--EEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc--
Confidence 35799999999998 8 899999999999999999976544444556788999999999999999999998753210
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.....+|+||||+ +.|...+... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~~L~~LH~-~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCcCHHHHHhcc-----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 0123689999999 5677666432 2234466779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
+....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 170 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~ 236 (359)
T cd07876 170 ARTACTNF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE 236 (359)
T ss_pred ccccccCc-------cCCCCcccCCCCCchhccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87653321 1112244568999999876 3567789999999999999999988853210
Q ss_pred -----------------h----cc------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------R----NT------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------~----~~------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .. ...+..+.+++.+||..||.+||++.++++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0 00 01234578899999999999999999999999
Q ss_pred cCCcccccccc
Q 004025 282 VGDFWMTEYFQ 292 (778)
Q Consensus 282 ~~~~w~~~ff~ 292 (778)
|+..+|.
T Consensus 317 ----~~~~~~~ 323 (359)
T cd07876 317 ----YITVWYD 323 (359)
T ss_pred ----hhhhhcC
Confidence 7766654
No 40
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6.9e-33 Score=295.66 Aligned_cols=242 Identities=19% Similarity=0.262 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~~~g 95 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||.+......+.....+.+|+..++.| +||||+++++++.....+.
T Consensus 1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYG--TVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred CceEeeEEeecCCe--EEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 599999999998 8 999999999999999999986533332233455666666655 6999999999987532211
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+|+||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 79 ---~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 79 ---ETKVTLVFEHVDQDLRTYLDKVPPPG-LPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred ---CceEEEEEcccccCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECccC
Confidence 34789999999 57888887644222 2345577789999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~--- 247 (778)
++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|.++|..... .
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~ 220 (288)
T cd07863 154 LARIYSCQMA-------LTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 220 (288)
T ss_pred ccccccCccc-------CCCccccccccCchHhhC------CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHH
Confidence 9876643211 111234558999999876 3567899999999999999999988743210 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp 286 (288)
T cd07863 221 DLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP 286 (288)
T ss_pred HHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence 0023455678899999999999999999999998
No 41
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.8e-34 Score=309.67 Aligned_cols=241 Identities=20% Similarity=0.231 Sum_probs=205.0
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|+..+.+|.|. | .++..+++.+++.|++|.+......+.....+.+|+..+++++||||+.|.+.|+.++
T Consensus 3 m~~Ye~~~~iG~GafG--~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~---- 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFG--SALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG---- 76 (426)
T ss_pred cchhhhhhhcCccccc--hhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC----
Confidence 35799999999999 8 7888899999999999999987766666668999999999999999999999999753
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||| ++|.+.|++.+... ..++.|.+++.||+.|+.||| +.+|+|||||+.|||++.++.+||+|||
T Consensus 77 ---~~l~Ivm~Y~eGg~l~~~i~~~k~~~-f~E~~i~~~~~Q~~~av~ylH-~~~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 77 ---QLLCIVMEYCEGGDLAQLIKEQKGVL-FPEERILKWFVQILLAVNYLH-ENRVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred ---ceEEEEEeecCCCCHHHHHHHHhhcc-ccHHHHHHHHHHHHHHHHHHH-hhhhhcccchhhhhhccccCceeecchh
Confidence 3599999999 68999998876222 234556777999999999999 5999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----- 249 (778)
+++.+..... .....++++.|++||++.+ ..|..++|||||||.||||++-++.|+..+...+
T Consensus 152 laK~l~~~~~------~a~tvvGTp~YmcPEil~d------~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~ 219 (426)
T KOG0589|consen 152 LAKILNPEDS------LASTVVGTPYYMCPEILSD------IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKIN 219 (426)
T ss_pred hhhhcCCchh------hhheecCCCcccCHHHhCC------CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHh
Confidence 9999876421 2233466779999999998 5889999999999999999999999987654332
Q ss_pred ----CCCC----cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ----ASIP----KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ----~~iP----~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+| ..+..+++.||..+|..||++.++|.+|
T Consensus 220 ~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 220 RGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP 259 (426)
T ss_pred hccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence 2333 4578889999999999999999999987
No 42
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.1e-32 Score=301.58 Aligned_cols=238 Identities=16% Similarity=0.163 Sum_probs=193.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | .||+++++.+|..|++|++.... .......+.+|+++|+.++||||+++++++..+
T Consensus 2 l~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 75 (331)
T cd06649 2 LKDDDFERISELGAGNGG--VVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--- 75 (331)
T ss_pred CCcccceEEEeecCCCCE--EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC---
Confidence 3567899999999998 7 89999999999999999998643 234456789999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|
T Consensus 76 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~D 147 (331)
T cd06649 76 -----GEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCD 147 (331)
T ss_pred -----CEEEEEeecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEcc
Confidence 3899999999 579999876542 234456667999999999999755799999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++....... .....++..|+|||++.+ ..++.++|+|||||++|||++|+.||.......
T Consensus 148 fg~~~~~~~~~--------~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~ 213 (331)
T cd06649 148 FGVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAI 213 (331)
T ss_pred Ccccccccccc--------cccCCCCcCcCCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 99987664321 111234568999999876 356789999999999999999998874211000
Q ss_pred --------------------------------------------------------cCCCCcchHHHHHHHhccCCCCCC
Q 004025 249 --------------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRL 272 (778)
Q Consensus 249 --------------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rp 272 (778)
...++..+.+++.+||..||.+||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rp 293 (331)
T cd06649 214 FGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERA 293 (331)
T ss_pred hcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCC
Confidence 012455678999999999999999
Q ss_pred ChHHHHhcc
Q 004025 273 NSSKLIENS 281 (778)
Q Consensus 273 s~~~lL~~~ 281 (778)
++.++++|+
T Consensus 294 t~~ell~h~ 302 (331)
T cd06649 294 DLKMLMNHT 302 (331)
T ss_pred CHHHHhcCh
Confidence 999999998
No 43
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.7e-33 Score=306.49 Aligned_cols=233 Identities=15% Similarity=0.239 Sum_probs=191.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | .||+|+++.+++.|+||++.+..... .....+.+|+.+|+.++||||+++++.++..
T Consensus 2 ~y~~~~~ig~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~------ 73 (333)
T cd05600 2 DFQILTQVGQGGYG--QVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD------ 73 (333)
T ss_pred CcEEEEEEeecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC------
Confidence 599999999998 8 99999999999999999998643221 3455688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~l---~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kL~Dfg~ 147 (333)
T cd05600 74 --EYLYLAMEYVPGGDFRTLLNNLGVL---SEDHARFYMAEMFEAVDALHE-LGYIHRDLKPENFLIDASGHIKLTDFGL 147 (333)
T ss_pred --CEEEEEEeCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCCEEEEeCcC
Confidence 4899999999 5799999765432 234456679999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+...... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 148 a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 212 (333)
T cd05600 148 SKGIVTY---------ANSVVGSPDYMAPEVLRG------KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY 212 (333)
T ss_pred Ccccccc---------cCCcccCccccChhHhcC------CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh
Confidence 8765431 112245568999999876 356789999999999999999999985432110
Q ss_pred ---c----------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---T----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---~----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+++.+||..+|.+|+++.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 213 WKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred ccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence 0 13467788999999999999999999999998
No 44
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.1e-32 Score=298.03 Aligned_cols=239 Identities=17% Similarity=0.252 Sum_probs=189.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|.+.+++|.|+ | +||+|+++.+++.|+||.+....... ....+.+|+.+++.++||||+++++++..+
T Consensus 5 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 76 (309)
T cd07872 5 METYIKLEKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIVHTD----- 76 (309)
T ss_pred CCceEEEEEecccCCE--EEEEEEecCCCCeEEEEEeeccccCC-cchhHHHHHHHHHhCCCCCcceEEEEEeeC-----
Confidence 35699999999998 8 89999999999999999997643322 234567899999999999999999999864
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 77 ---~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 150 (309)
T cd07872 77 ---KSLTLVFEYLDKDLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHR-RKVLHRDLKPQNLLINERGELKLADFGL 150 (309)
T ss_pred ---CeEEEEEeCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECcccc
Confidence 3899999999 578887765432 12234455668999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 219 (309)
T cd07872 151 ARAKSVPTKT------YSNEVVTLWYRPPDVLLGS-----SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR 219 (309)
T ss_pred ceecCCCccc------cccccccccccCCHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 8765432110 1112345689999998653 34677899999999999999999887432110
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||+.||.+|+++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 287 (309)
T cd07872 220 LLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287 (309)
T ss_pred HhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence 0123566778899999999999999999999998
No 45
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.7e-33 Score=293.07 Aligned_cols=245 Identities=15% Similarity=0.178 Sum_probs=197.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..|++.+.||.|. | +||.+..+.++..+|+|++++.... ...+.++..|-++|..+.||.+..+|..|+++
T Consensus 77 ~~f~llk~LG~GdiG--~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~----- 149 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIG--TVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD----- 149 (459)
T ss_pred HHHHHHHHcCCCCce--eEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc-----
Confidence 3588899999999 9 9999999999999999999986533 34567788899999999999999999999985
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++|+||||| ++|..+.+++.. ....+..++.++..|+-||.|||. .|||+|||||+||+|-++|++.|.||+
T Consensus 150 ---~~~cl~meyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHm-lGivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 150 ---KYSCLVMEYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHM-LGIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred ---ceeEEEEecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHh-hceeeccCCcceeEEecCCcEEeeecc
Confidence 4999999999 689888776553 233455577889999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCC-----------------------------C-C------------------C--CccccccccCCCCCCc
Q 004025 175 VLSEFDGNNEA-----------------------------A-N------------------G--PMLQYAWLVGAQYKPV 204 (778)
Q Consensus 175 la~~~~~~~~~-----------------------------~-~------------------~--~~~~~~~~~~~~Y~aP 204 (778)
++....-.... . . . ......++++..|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 97543210000 0 0 0 0111223445589999
Q ss_pred cccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhcc----C------CCCcchHHHHHHHhccCCCC
Q 004025 205 ELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRNT----A------SIPKSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 205 E~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~~----~------~iP~~L~~~i~~lL~~dP~~ 270 (778)
|++++ .+.+.++|+|.||+++|||+.|..||+... +.++ . .++..+.++|++||.+||.+
T Consensus 305 EvI~G------~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 305 EVIRG------EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred eeeec------CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 99998 478899999999999999999999997643 2222 2 33456899999999999999
Q ss_pred CCC----hHHHHhcc
Q 004025 271 RLN----SSKLIENS 281 (778)
Q Consensus 271 Rps----~~~lL~~~ 281 (778)
|+. ++++.+|+
T Consensus 379 Rlg~~rGA~eIK~Hp 393 (459)
T KOG0610|consen 379 RLGSKRGAAEIKRHP 393 (459)
T ss_pred hhccccchHHhhcCc
Confidence 999 89999997
No 46
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.1e-33 Score=306.45 Aligned_cols=241 Identities=16% Similarity=0.234 Sum_probs=193.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||++.+..... .....+.+|+++++.++||||+++++.++++
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (350)
T cd05573 2 DFEVIKVIGRGAFG--EVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE------ 73 (350)
T ss_pred CceEEEEEEeCCcE--EEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC------
Confidence 699999999998 8 99999999999999999998643222 3456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 74 --EHLYLVMEYMPGGDLMNLLIRKDV---FPEETARFYIAELVLALDSVHK-LGFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred --CeEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEeecCCC
Confidence 4899999999 579998877532 2344566779999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------CCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 176 LSEFDGNNEAA-----------------------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 176 a~~~~~~~~~~-----------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
+.......... ..........++..|+|||++.+ ..++.++|+|||||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ 221 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG------TPYGLECDWWSLGVILY 221 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC------CCCCCceeeEecchhhh
Confidence 98765432000 00011112244568999999887 36778999999999999
Q ss_pred HHHhCCCCCChhhh-------hc---------cCCCCcchHHHHHHHhccCCCCCCC-hHHHHhcc
Q 004025 233 ELFSGMRLSKTEEL-------RN---------TASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENS 281 (778)
Q Consensus 233 el~tg~~p~~~~~l-------~~---------~~~iP~~L~~~i~~lL~~dP~~Rps-~~~lL~~~ 281 (778)
||++|..||..... .. ...+|..+.+++++||. +|..|++ +.++++|+
T Consensus 222 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 222 EMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred hhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 99999998854211 11 12357778999999997 9999999 99999998
No 47
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.4e-32 Score=303.51 Aligned_cols=247 Identities=17% Similarity=0.235 Sum_probs=193.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | .||.+.++.+++.|+||++............+.+|+.+++.++||||+++++++...... .
T Consensus 17 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~ 92 (355)
T cd07874 17 KRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL--E 92 (355)
T ss_pred hceeEEEEeeecCCE--EEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc--c
Confidence 5799999999998 8 899999999999999999986544445566788999999999999999999998653210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||+ +.|...+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 93 ~~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~-~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 93 EFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ccceeEEEhhhhcccHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 124689999999 5677766532 2234456679999999999995 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------c
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~ 248 (778)
+...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... .
T Consensus 167 ~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (355)
T cd07874 167 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233 (355)
T ss_pred ccCCCcc-------ccCCccccCCccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 8654321 1122345668999999876 35678999999999999999999887532100 0
Q ss_pred ----------------------c------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhccc
Q 004025 249 ----------------------T------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSV 282 (778)
Q Consensus 249 ----------------------~------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~ 282 (778)
. ...+..+.+++.+||..||.+|||+.++++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp- 312 (355)
T cd07874 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP- 312 (355)
T ss_pred hCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc-
Confidence 0 00123467889999999999999999999999
Q ss_pred CCcccccccc
Q 004025 283 GDFWMTEYFQ 292 (778)
Q Consensus 283 ~~~w~~~ff~ 292 (778)
|+..++.
T Consensus 313 ---~~~~~~~ 319 (355)
T cd07874 313 ---YINVWYD 319 (355)
T ss_pred ---chhcccC
Confidence 7766554
No 48
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.1e-32 Score=306.56 Aligned_cols=243 Identities=18% Similarity=0.229 Sum_probs=190.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++|+.++||||++++++++......
T Consensus 1 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--- 75 (372)
T cd07853 1 DVEPDRPIGYGAFG--VVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDP--- 75 (372)
T ss_pred CCcccceeeeCCCE--EEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccc---
Confidence 488999999998 8 9999999999999999998754333344567889999999999999999999998643211
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...+|+||||+ ++|...+..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 76 FEEIYVVTELMQSDLHKIIVSPQP---LSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred cceEEEEeeccccCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHHEEECCCCCEEecccccee
Confidence 23789999999 567777754332 2345567779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~------ 247 (778)
........ ......++..|+|||++.+. ..++.++|+|||||++|||++|+.||..... .
T Consensus 152 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~ 221 (372)
T cd07853 152 VEEPDESK-----HMTQEVVTQYYRAPEILMGS-----RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLL 221 (372)
T ss_pred ecccCccc-----cCCCCCcCCCcCCHHHHcCC-----CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHc
Confidence 65432110 01112345689999998763 3467789999999999999999988853210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+..+.+++.+||..||.+||++.++++|+
T Consensus 222 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 222 GTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred CCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 0012345677899999999999999999999998
No 49
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-32 Score=309.09 Aligned_cols=234 Identities=15% Similarity=0.174 Sum_probs=186.5
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
++....|++.+.||.|+ | .||.|.++.+++.|+||.... ..+.+|+++|+.|+||||+++++++..+
T Consensus 88 ~~~~~~y~~~~~lg~G~~g--~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~-- 155 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEG--FAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYN-- 155 (391)
T ss_pred ccccCCcEEEEEEcCCCCe--EEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEEC--
Confidence 34456799999999998 8 999999999999999997532 2467899999999999999999999864
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...|+|+|++ ++|..++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 156 ------~~~~lv~e~~~~~L~~~l~~~~~l---~~~~~~~i~~qi~~aL~ylH~-~~IvHrDiKP~NIll~~~~~vkL~D 225 (391)
T PHA03212 156 ------KFTCLILPRYKTDLYCYLAAKRNI---AICDILAIERSVLRAIQYLHE-NRIIHRDIKAENIFINHPGDVCLGD 225 (391)
T ss_pred ------CeeEEEEecCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHhEEEcCCCCEEEEe
Confidence 3899999999 5788887664322 233456679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC-Chh-------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTE------- 244 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~-~~~------- 244 (778)
||++........ ...+.+.++..|+|||++.+ ..++.++|+|||||++|||++|..++ ...
T Consensus 226 FG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~ 294 (391)
T PHA03212 226 FGAACFPVDINA-----NKYYGWAGTIATNAPELLAR------DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCD 294 (391)
T ss_pred CCcccccccccc-----cccccccCccCCCChhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCc
Confidence 999875432110 01123456679999999876 35678999999999999999998543 110
Q ss_pred ---h----------------------hh---------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 245 ---E----------------------LR---------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 245 ---~----------------------l~---------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
+ +. ....+|..+.+++.+||+.||.+||++.++|
T Consensus 295 ~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL 374 (391)
T PHA03212 295 SDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374 (391)
T ss_pred hhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh
Confidence 0 00 0113466788899999999999999999999
Q ss_pred hcc
Q 004025 279 ENS 281 (778)
Q Consensus 279 ~~~ 281 (778)
+|+
T Consensus 375 ~hp 377 (391)
T PHA03212 375 DFA 377 (391)
T ss_pred cCh
Confidence 998
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.4e-32 Score=294.00 Aligned_cols=236 Identities=14% Similarity=0.201 Sum_probs=188.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+.||.|+ | +||+|.++.+|+.|+||.+.+..... .....+.+|+++|+.++||||+++++.++++
T Consensus 2 f~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~------- 72 (285)
T cd05631 2 FRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK------- 72 (285)
T ss_pred ceEEEEEecCCCE--EEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-------
Confidence 78889999998 8 99999999999999999998643222 2334577899999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~g~L~~~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 73 -DALCLVLTIMNGGDLKFHIYNMGNPG-FDEQRAIFYAAELCCGLEDLQR-ERIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred -CeEEEEEEecCCCcHHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 3899999999 57887776543211 2233455668999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------hh--
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LR-- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l~-- 247 (778)
........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.... +.
T Consensus 150 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~ 216 (285)
T cd05631 150 VQIPEGET-------VRGRVGTVGYMAPEVINN------EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR 216 (285)
T ss_pred EEcCCCCe-------ecCCCCCCCccCHhhhcC------CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH
Confidence 77543211 112234568999999876 356789999999999999999999985321 11
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
....++..+..++++||+.||.+|++ ++++++|+
T Consensus 217 ~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~ 262 (285)
T cd05631 217 VKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262 (285)
T ss_pred hhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence 01246677889999999999999997 89999998
No 51
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-32 Score=299.72 Aligned_cols=238 Identities=16% Similarity=0.182 Sum_probs=192.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.++||.|+ | .||.++++.++..|++|.+.... .+...+.+.+|+++|+.++||||++++++++.+
T Consensus 2 l~~~~y~~~~~lg~g~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 75 (333)
T cd06650 2 LKDDDFEKISELGAGNGG--VVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--- 75 (333)
T ss_pred cchhhhheeccccCCCCE--EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC---
Confidence 3457899999999998 8 89999999999999999987643 333456788999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++...+.. ....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|
T Consensus 76 -----~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~D 147 (333)
T cd06650 76 -----GEISICMEHMDGGSLDQVLKKAGRI---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 147 (333)
T ss_pred -----CEEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEee
Confidence 3899999999 5799998765432 23445667899999999999646899999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++..+.... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 148 fg~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~ 213 (333)
T cd06650 148 FGVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELM 213 (333)
T ss_pred CCcchhhhhhc--------cccCCCCccccCHHHhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHH
Confidence 99987654321 011234558999999876 356778999999999999999988764211000
Q ss_pred ------------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCCh
Q 004025 249 ------------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNS 274 (778)
Q Consensus 249 ------------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~ 274 (778)
...++..+.+++.+||..||.+||++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~ 293 (333)
T cd06650 214 FGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADL 293 (333)
T ss_pred hcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCH
Confidence 00134567789999999999999999
Q ss_pred HHHHhcc
Q 004025 275 SKLIENS 281 (778)
Q Consensus 275 ~~lL~~~ 281 (778)
.++++|+
T Consensus 294 ~ell~h~ 300 (333)
T cd06650 294 KQLMVHA 300 (333)
T ss_pred HHHhhCH
Confidence 9999998
No 52
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.3e-33 Score=306.19 Aligned_cols=241 Identities=15% Similarity=0.197 Sum_probs=190.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.|+++.+|+.|+||++.+... .......+++|+.+|+.++||||+++++.+++.
T Consensus 2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------ 73 (364)
T cd05599 2 DFESIKVIGRGAFG--EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE------ 73 (364)
T ss_pred CceEEEEEEecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC------
Confidence 699999999998 8 999999999999999999985422 123456688999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| ++|.+++...+. .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 147 (364)
T cd05599 74 --NYLYLIMEYLPGGDMMTLLMKKDT---FTEEETRFYIAETILAIDSIHK-LGYIHRDIKPDNLLLDAKGHIKLSDFGL 147 (364)
T ss_pred --CeEEEEECCCCCcHHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEeeccc
Confidence 4899999999 579998876542 2344567779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-----------------C---------------ccccccccCCCCCCccccccccccccCCCCCcch
Q 004025 176 LSEFDGNNEAANG-----------------P---------------MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223 (778)
Q Consensus 176 a~~~~~~~~~~~~-----------------~---------------~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~D 223 (778)
+..+......... + ...+...++..|+|||++.+ ..++.++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~D 221 (364)
T cd05599 148 CTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ------TGYNKECD 221 (364)
T ss_pred ceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC------CCCCCeee
Confidence 8765432110000 0 00112235668999999875 35678999
Q ss_pred hHHHHHHHHHHHhCCCCCChhhhh----------cc------CCCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 224 SWGLGCLIYELFSGMRLSKTEELR----------NT------ASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 224 iwSLG~liyel~tg~~p~~~~~l~----------~~------~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
+|||||++|||++|..||...... .. ..+++.+.+++++||. +|.+|++ +.++++|+
T Consensus 222 iwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~ 297 (364)
T cd05599 222 WWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP 297 (364)
T ss_pred eecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence 999999999999999998643211 00 1345667888999986 8999998 99999998
No 53
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.7e-32 Score=312.40 Aligned_cols=239 Identities=18% Similarity=0.183 Sum_probs=190.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCC-CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDD-GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~-g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|.+.+.+|.|+ | .||.|.+..+ +..|++|.+... .......+++|+.+|+.++||||+++++.++.+
T Consensus 68 ~y~~~~~lg~G~~g--~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~------ 137 (478)
T PTZ00267 68 MYVLTTLVGRNPTT--AAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSD------ 137 (478)
T ss_pred eEEEEEEEEeCCCc--EEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC------
Confidence 499999999998 7 8999999888 788999987543 233456788999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||+ ++|.++|..... ........+.+++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||
T Consensus 138 --~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~~~~~~kL~DFg 214 (478)
T PTZ00267 138 --DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS-RKMMHRDLKSANIFLMPTGIIKLGDFG 214 (478)
T ss_pred --CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCcCHHhEEECCCCcEEEEeCc
Confidence 3899999999 579988865321 1122344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++..+...... .......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 215 la~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~ 284 (478)
T PTZ00267 215 FSKQYSDSVSL----DVASSFCGTPYYLAPELWER------KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVL 284 (478)
T ss_pred CceecCCcccc----ccccccCCCccccCHhHhCC------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99876542110 01112245568999999876 35678999999999999999999888643211
Q ss_pred --cc----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --NT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ..++..+.+++.+||..+|..||++.+++.++
T Consensus 285 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~ 324 (478)
T PTZ00267 285 YGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTE 324 (478)
T ss_pred hCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCH
Confidence 11 24566788999999999999999999999987
No 54
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.3e-32 Score=312.96 Aligned_cols=244 Identities=16% Similarity=0.258 Sum_probs=187.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++++.||.|+ | +||+|+++.+++.||||++.... ....+|+.+|+.++||||+++++++..+....
T Consensus 64 ~~~~y~~~~~LG~G~fg--~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFG--VVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 445799999999998 8 99999999999999999986431 13457999999999999999998875432111
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEe
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~d 172 (778)
.....++|+||||+ +.|..++...... .......+..+++||+.||.|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~-~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS-KFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCcCHHHEEEcCCCCceeeec
Confidence 11134688999999 5787777653221 223344566778999999999995 8999999999999999665 699999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||+++.+..... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 215 FGla~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 282 (440)
T PTZ00036 215 FGSAKNLLAGQR-------SVSYICSRFYRAPELMLGA-----TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVR 282 (440)
T ss_pred cccchhccCCCC-------cccCCCCcCccCHHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999987654211 1123456689999998653 356789999999999999999999885421 000
Q ss_pred c-------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T-------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~-------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ...|..+.+++.+||..+|.+|+++.++++|+
T Consensus 283 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp 352 (440)
T PTZ00036 283 IIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADP 352 (440)
T ss_pred HHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCCh
Confidence 0 12456788999999999999999999999998
No 55
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-32 Score=298.42 Aligned_cols=229 Identities=16% Similarity=0.195 Sum_probs=183.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
||.|+ | +||+|+++.+++.|+||++.+... .......+.+|+.+|+.++||||+++++.++.+ ..+||
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~l 70 (312)
T cd05585 1 IGKGSFG--KVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP--------EKLYL 70 (312)
T ss_pred CCcCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC--------CeEEE
Confidence 46676 7 899999999999999999975321 223456678899999999999999999999864 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 71 VLAFINGGELFHHLQREGR---FDLSRARFYTAELLCALENLHK-FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred EEcCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 99999 579888876542 2334456679999999999995 99999999999999999999999999998754322
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------cC
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------TA 250 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------~~ 250 (778)
... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||....... ..
T Consensus 147 ~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 214 (312)
T cd05585 147 DDK------TNTFCGTPEYLAPELLLG------HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD 214 (312)
T ss_pred CCc------cccccCCcccCCHHHHcC------CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCC
Confidence 110 112234568999999876 357789999999999999999999986432211 13
Q ss_pred CCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 251 SIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 251 ~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
.++..+.+++.+||..||.+|++ +.++++|+
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp 248 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHP 248 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCC
Confidence 46677889999999999999974 68999998
No 56
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=9.1e-33 Score=301.25 Aligned_cols=234 Identities=17% Similarity=0.225 Sum_probs=184.2
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHH---hcCCCCCeeeEeeeeEeccccc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRL---RTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~L---k~LrHPnIlk~~d~~e~e~~~g 95 (778)
|++.+.||.|+ | +||.|.++.+|+.|+||++.+... .....+.+.+|++.+ +.++||||++++++++..
T Consensus 1 y~i~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~---- 74 (324)
T cd05589 1 FRCLAVLGRGHFG--KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE---- 74 (324)
T ss_pred CeEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC----
Confidence 78889999998 7 999999999999999999985421 112345566666554 567899999999999863
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|..++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 75 ----~~~~lv~E~~~~~~L~~~~~~~~----l~~~~~~~~~~qi~~al~~lH~-~~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 75 ----DHVCFVMEYAAGGDLMMHIHTDV----FSEPRAVFYAACVVLGLQYLHE-NKIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred ----CEEEEEEcCCCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCCcEEeCcc
Confidence 4899999999 46877775433 2334456669999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++........ ......+...|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 146 g~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i 213 (324)
T cd05589 146 GLCKEGMGFGD------RTSTFCGTPEFLAPEVLTE------TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSI 213 (324)
T ss_pred cCCccCCCCCC------cccccccCccccCHhHhcC------CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99875432211 0112244568999999876 35678899999999999999999998643211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
....+|..+.+++++||+.||.+|| ++.++++|+
T Consensus 214 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 214 VNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 1134677788999999999999999 688999997
No 57
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.5e-33 Score=304.44 Aligned_cols=237 Identities=18% Similarity=0.204 Sum_probs=190.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
+...+|++.+.||.|+ | .||+|+++.++ ..|+||++.+... .....+.+.+|+++++.++||||+++++++..+
T Consensus 27 ~~~~~y~~~~~ig~G~~g--~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~- 103 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFG--RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE- 103 (340)
T ss_pred CChhhcEEEEEEeecCCe--EEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-
Confidence 3445799999999998 8 89999876554 7899999975422 223456788999999999999999999999874
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 104 -------~~~~lv~Ey~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~ikL 172 (340)
T PTZ00426 104 -------SYLYLVLEFVIGGEFFTFLRRNKR---FPNDVGCFYAAQIVLIFEYLQS-LNIVYRDLKPENLLLDKDGFIKM 172 (340)
T ss_pred -------CEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCCCEEE
Confidence 3899999999 579998876543 2344456679999999999995 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---- 246 (778)
+|||++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||.....
T Consensus 173 ~DFG~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 237 (340)
T PTZ00426 173 TDFGFAKVVDTR---------TYTLCGTPEYIAPEILLN------VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIY 237 (340)
T ss_pred ecCCCCeecCCC---------cceecCChhhcCHHHHhC------CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHH
Confidence 999998876431 112244568999999876 3567899999999999999999998864321
Q ss_pred h----cc----CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 247 R----NT----ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 247 ~----~~----~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. .. ..++..+.+++++||+.+|.+|+ ++.++++|+
T Consensus 238 ~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp 285 (340)
T PTZ00426 238 QKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHP 285 (340)
T ss_pred HHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence 1 11 23456678899999999999996 899999998
No 58
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.8e-32 Score=302.20 Aligned_cols=246 Identities=17% Similarity=0.236 Sum_probs=192.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|.+.+.||.|+ | .||.|.++.+++.|+||++............+.+|+.+++.++||||+++++++...... .
T Consensus 24 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~--~ 99 (364)
T cd07875 24 KRYQNLKPIGSGAQG--IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL--E 99 (364)
T ss_pred cceeEEEEeecCCCe--EEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc--c
Confidence 5799999999998 8 899999999999999999986544444556788999999999999999999988643210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||+ +.|..++... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCCCHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 124689999999 5677776532 1234466779999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------hc
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------RN 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------~~ 248 (778)
+...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|+.||..... ..
T Consensus 174 ~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 240 (364)
T cd07875 174 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240 (364)
T ss_pred cccCCCC-------cccCCcccCCcCCHHHHhC------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7654321 1112345568999999876 3567899999999999999999988753210 00
Q ss_pred ----------------------cC------------------------CCCcchHHHHHHHhccCCCCCCChHHHHhccc
Q 004025 249 ----------------------TA------------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSV 282 (778)
Q Consensus 249 ----------------------~~------------------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~ 282 (778)
.. ..+..+.+++.+||..||.+||++.++|+|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp- 319 (364)
T cd07875 241 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP- 319 (364)
T ss_pred cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc-
Confidence 00 0123467889999999999999999999999
Q ss_pred CCccccccc
Q 004025 283 GDFWMTEYF 291 (778)
Q Consensus 283 ~~~w~~~ff 291 (778)
|+..++
T Consensus 320 ---~~~~~~ 325 (364)
T cd07875 320 ---YINVWY 325 (364)
T ss_pred ---cccccc
Confidence 665444
No 59
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5e-32 Score=293.69 Aligned_cols=241 Identities=18% Similarity=0.256 Sum_probs=181.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
|.|+ +.+||.|+ | +||+|+++. ++..|+||.+..... ...+.+|+++|+.++||||+++++.+....
T Consensus 2 ~~~~-~~~lG~G~~g--~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 71 (317)
T cd07868 2 FEYE-GCKVGRGTYG--HVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHA--- 71 (317)
T ss_pred cccc-ccccccCCCe--EEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCC---
Confidence 4555 56899998 8 999999764 678999999875432 234678999999999999999999987544
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcC------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE----cC
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLE------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQ 164 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v----~~ 164 (778)
...+|+|+||+ ++|..++...... .......++.++.||+.||.|||+ .+++||||||+||++ +.
T Consensus 72 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~ 147 (317)
T cd07868 72 ---DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred ---CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEecCCCC
Confidence 34899999999 5788777643211 112344577789999999999995 899999999999999 46
Q ss_pred CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh
Q 004025 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE 244 (778)
Q Consensus 165 ~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~ 244 (778)
+|.+||+|||++..+........ ......++..|+|||++.+. ..++.++|+|||||++|+|++|.+||...
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLKPLA---DLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCcEEEeecCceeccCCCCcccc---ccCCccccccccCCHHHcCC-----CCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 68899999999987654211000 01122445689999998763 34678999999999999999999887421
Q ss_pred h-------------hhc---------------cC-------------------------------CCCcchHHHHHHHhc
Q 004025 245 E-------------LRN---------------TA-------------------------------SIPKSLLPDYQRLLS 265 (778)
Q Consensus 245 ~-------------l~~---------------~~-------------------------------~iP~~L~~~i~~lL~ 265 (778)
+ +.. .. ..+..+.+++++||.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 299 (317)
T cd07868 220 QEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLT 299 (317)
T ss_pred cccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhc
Confidence 1 000 00 012236678999999
Q ss_pred cCCCCCCChHHHHhcc
Q 004025 266 SMPSRRLNSSKLIENS 281 (778)
Q Consensus 266 ~dP~~Rps~~~lL~~~ 281 (778)
.||.+|+|+.++|+|+
T Consensus 300 ~dP~~R~t~~e~l~hp 315 (317)
T cd07868 300 MDPIKRITSEQAMQDP 315 (317)
T ss_pred cCcccCCCHHHHhcCC
Confidence 9999999999999998
No 60
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.5e-32 Score=301.43 Aligned_cols=237 Identities=17% Similarity=0.219 Sum_probs=185.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.++||.|+ | +||+|+++.+|+.|+||++.... .+.....+.+|+++|+.++||||++++++++.+
T Consensus 74 ~~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 144 (353)
T PLN00034 74 SELERVNRIGSGAGG--TVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHN------ 144 (353)
T ss_pred HHHhhhhhccCCCCe--EEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC------
Confidence 3688999999998 8 99999999999999999997543 334456788999999999999999999999764
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.... . .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 145 --~~~~lv~e~~~~~~L~~~~----~---~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kL~DfG~ 214 (353)
T PLN00034 145 --GEIQVLLEFMDGGSLEGTH----I---ADEQFLADVARQILSGIAYLHR-RHIVHRDIKPSNLLINSAKNVKIADFGV 214 (353)
T ss_pred --CeEEEEEecCCCCcccccc----c---CCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCEEEccccc
Confidence 3899999999 3554321 1 1233455679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+..+...... .....++..|++||++...... ......++|+|||||++|||++|+.+|......
T Consensus 215 ~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~ 287 (353)
T PLN00034 215 SRILAQTMDP------CNSSVGTIAYMSPERINTDLNH-GAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA 287 (353)
T ss_pred ceeccccccc------ccccccCccccCcccccccccc-CcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH
Confidence 8876532110 0112345689999987542110 123446899999999999999999988522110
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 288 ~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 288 ICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred HhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0134567789999999999999999999999998
No 61
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.4e-32 Score=299.86 Aligned_cols=230 Identities=16% Similarity=0.212 Sum_probs=183.6
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
.||.|+ | +||+++++.+|..|+||++..... .......+.+|+++++.++||||+++++.++.+ ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--------~~~~ 71 (323)
T cd05595 2 LLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--------DRLC 71 (323)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--------CEEE
Confidence 577787 7 999999999999999999986422 123455677899999999999999999999864 3899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~E~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 147 (323)
T cd05595 72 FVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEEcCCCCEEecccHHhccccC
Confidence 999999 478888876542 2344566678999999999996 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------c----c
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N----T 249 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~----~ 249 (778)
... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... . .
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p 215 (323)
T cd05595 148 DGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 215 (323)
T ss_pred CCC------ccccccCCcCcCCcccccC------CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 111 0111234568999999876 35678999999999999999999887532211 1 1
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..+++.+.+++.+||..+|.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence 34567788999999999999998 899999997
No 62
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.9e-32 Score=300.91 Aligned_cols=240 Identities=16% Similarity=0.256 Sum_probs=189.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|.++.++..|+||++............+.+|+++|+.++||||+++++++...... .
T Consensus 15 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 90 (343)
T cd07878 15 ERYQNLTPVGSGAYG--SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI--E 90 (343)
T ss_pred hhhhhheecccCCCe--EEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc--c
Confidence 4799999999998 8 999999999999999999976533333455677999999999999999999988643211 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+++|++ ++|..+++... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~-~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLMGADLNNIVKCQK----LSDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeecccCChhhEEECCCCCEEEcCCccc
Confidence 124689999999 46877776433 2344567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
....... ....++..|+|||++.+. ..++.++|+|||||++|+|++|..||..... .
T Consensus 166 ~~~~~~~---------~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07878 166 RQADDEM---------TGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV 231 (343)
T ss_pred eecCCCc---------CCccccccccCchHhcCC-----ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 8764321 122455689999998653 3567899999999999999999988753210 0
Q ss_pred ----------------------cc------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------~~------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++.+.+++.+||..||.+||++.++++|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 00 01233467889999999999999999999998
No 63
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=300.02 Aligned_cols=238 Identities=17% Similarity=0.217 Sum_probs=202.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|+..+.||.|. | .||+|.+..+++.||||+++.....+ ..+.++.|+..|..++||||.+||++|...
T Consensus 11 ~~~~~~~~~~IgrGsfG--~Vyk~~d~~t~k~vAiKii~Le~~~d-eIediqqei~~Ls~~~~~~it~yygsyl~g---- 83 (467)
T KOG0201|consen 11 PELLYTKLELIGRGSFG--EVYKAIDNKTKKVVAIKIIDLEEAED-EIEDIQQEISVLSQCDSPNITEYYGSYLKG---- 83 (467)
T ss_pred cccccccchhccccccc--eeeeeeeccccceEEEEEechhhcch-hhHHHHHHHHHHHhcCcchHHhhhhheeec----
Confidence 456799999999999 9 99999999999999999999875554 467789999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..++|+|||| +++.+.|+..... .+..+.+++++++.||.|||. .+.+|||||+.||++..+|.+||+||
T Consensus 84 ----~~LwiiMey~~gGsv~~lL~~~~~~---~E~~i~~ilre~l~~l~ylH~-~~kiHrDIKaanil~s~~g~vkl~Df 155 (467)
T KOG0201|consen 84 ----TKLWIIMEYCGGGSVLDLLKSGNIL---DEFEIAVILREVLKGLDYLHS-EKKIHRDIKAANILLSESGDVKLADF 155 (467)
T ss_pred ----ccHHHHHHHhcCcchhhhhccCCCC---ccceeeeehHHHHHHhhhhhh-cceecccccccceeEeccCcEEEEec
Confidence 4899999999 5788888876643 233467779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-hhhccC--
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-ELRNTA-- 250 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-~l~~~~-- 250 (778)
|++..+... ......+++++.|||||++++ ..|..++||||||++.|||.+|.||+..- ..+-+.
T Consensus 156 gVa~ql~~~------~~rr~tfvGTPfwMAPEVI~~------~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI 223 (467)
T KOG0201|consen 156 GVAGQLTNT------VKRRKTFVGTPFWMAPEVIKQ------SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI 223 (467)
T ss_pred ceeeeeech------hhccccccccccccchhhhcc------ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec
Confidence 999888763 223455677789999999996 57899999999999999999999987542 232222
Q ss_pred ----------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 251 ----------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 251 ----------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+.+.+.+++..||+.||+.||++.++|+|.
T Consensus 224 pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~ 264 (467)
T KOG0201|consen 224 PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHK 264 (467)
T ss_pred cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence 3445688999999999999999999999996
No 64
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.4e-32 Score=311.31 Aligned_cols=252 Identities=19% Similarity=0.207 Sum_probs=199.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|.+.+.||.|+ | +||.|+++.+|+.||||++......+.....+.+|+..|..++|+||+++++.+.......
T Consensus 30 ~~~rY~i~~~LG~G~fG--~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATG--TVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCE--EEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 446899999999998 8 9999999999999999999876555556677889999999999999999998876432111
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
......+|+||||+ ++|.++|+..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~-~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS-KHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEeCCCCEEEEe
Confidence 01123589999999 5899998764322 223344566779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||+++.+....... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 187 FGls~~~~~~~~~~----~~~~~~Gt~~Y~aPE~~~~------~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~ 256 (496)
T PTZ00283 187 FGFSKMYAATVSDD----VGRTFCGTPYYVAPEIWRR------KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK 256 (496)
T ss_pred cccCeecccccccc----ccccccCCcceeCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 99987664321100 0112245568999999876 357789999999999999999999986533211
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+..++.+||+.+|.+||++.++++|+
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p 298 (496)
T PTZ00283 257 TLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298 (496)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence 134567788999999999999999999999998
No 65
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9.8e-33 Score=301.51 Aligned_cols=243 Identities=15% Similarity=0.143 Sum_probs=193.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+++++.+|+.|+||++.+... .......+.+|+.+++.++||||+++++.++.+
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~------ 73 (330)
T cd05601 2 DFDVKSLVGRGHFG--EVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK------ 73 (330)
T ss_pred CceEEEEEEeccCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC------
Confidence 599999999998 8 999999999999999999986432 223456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~-~~i~H~Dlkp~NIll~~~~~~kL~Dfg~ 148 (330)
T cd05601 74 --DNLYLVMEYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQ-MGYVHRDIKPENVLIDRTGHIKLADFGS 148 (330)
T ss_pred --CeEEEEECCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEcccCchHheEECCCCCEEeccCCC
Confidence 3899999999 579999877521 12344566679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+..+..... .......++..|+|||++..........++.++|+|||||++|||++|..||..... ..
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~ 223 (330)
T cd05601 149 AARLTANKM-----VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMN 223 (330)
T ss_pred CeECCCCCc-----eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHc
Confidence 987654221 111122345689999998642111124567899999999999999999998853211 11
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||. +|.+|+++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~ 264 (330)
T cd05601 224 FQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP 264 (330)
T ss_pred CCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence 12456678889999997 999999999999998
No 66
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-33 Score=262.80 Aligned_cols=238 Identities=19% Similarity=0.308 Sum_probs=199.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|...++||+|. | +||+|+.+++++.|++|.......++.....+.+|+-+||.|+|.||++++|....+
T Consensus 2 ~~ydkmekigegtyg--tvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd------ 73 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYG--TVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------ 73 (292)
T ss_pred cchHHHHhhcCCcce--eeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC------
Confidence 3588889999999 9 999999999999999999998777777777899999999999999999999999875
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+.+-+|+||| .+|..++...+ +....+.++..+.|+++||.|+|+ .++.||||||.|.+|+.+|++||.|||++
T Consensus 74 --kkltlvfe~cdqdlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchs-hnvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 74 --KKLTLVFEFCDQDLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHS-HNVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred --ceeEEeHHHhhHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcceEEeccCCcEEecccchh
Confidence 3899999999 68999988754 334456667779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccc-cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChh----hhhcc-
Q 004025 177 SEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE----ELRNT- 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~----~l~~~- 249 (778)
+.+.- |+..|. -+++..|+||.++-+. +-|+.++||||-||++.|+.+ |.++|... +++.+
T Consensus 149 rafgi-------pvrcysaevvtlwyrppdvlfga-----kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif 216 (292)
T KOG0662|consen 149 RAFGI-------PVRCYSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216 (292)
T ss_pred hhcCC-------ceEeeeceeeeeeccCcceeeee-----ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHH
Confidence 98764 444443 3556799999999875 678899999999999999998 55777543 22211
Q ss_pred --------------C----------------------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --------------A----------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --------------~----------------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ++...-+++++++|.-+|.+|++++..++|+
T Consensus 217 ~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp 284 (292)
T KOG0662|consen 217 RLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP 284 (292)
T ss_pred HHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence 1 1112346778999999999999999999998
No 67
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.1e-32 Score=299.21 Aligned_cols=230 Identities=17% Similarity=0.217 Sum_probs=183.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
.||.|+ | +||.++++.+|+.|+||++.+... .......+.+|+++|+.++||||+++++.++.+ ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------~~~~ 71 (328)
T cd05593 2 LLGKGTFG--KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--------DRLC 71 (328)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--------CEEE
Confidence 467777 7 999999999999999999986432 223456678899999999999999999999864 4899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~Ey~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~ 147 (328)
T cd05593 72 FVMEYVNGGELFFHLSRERV---FSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT 147 (328)
T ss_pred EEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeEECCCCcEEEecCcCCccCCC
Confidence 999999 478888766432 2344466679999999999995 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c--------c
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N--------T 249 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~--------~ 249 (778)
... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... . .
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p 215 (328)
T cd05593 148 DAA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP 215 (328)
T ss_pred ccc------ccccccCCcCccChhhhcC------CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC
Confidence 110 0112245568999999876 35678999999999999999999988532211 1 1
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..++..+.+++++||..||.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence 24556788899999999999997 899999997
No 68
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2e-32 Score=304.45 Aligned_cols=243 Identities=14% Similarity=0.142 Sum_probs=192.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||+++++.++..|+||++.+... .......+.+|+.+++.++||||++++++++++
T Consensus 41 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~--- 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFG--EVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD--- 115 (370)
T ss_pred CHHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 345799999999998 8 999999999999999999975321 123345578899999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||| ++|..++..... ...++..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 116 -----~~~~lv~Ey~~gg~L~~~l~~~~l----~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 -----KYLYMVMEYMPGGDLVNLMSNYDI----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEcCCCCEEEEe
Confidence 4899999999 579998876542 244566668999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~ 248 (778)
||++........ .......++..|+|||++.+.-. ...++.++|+|||||++|||++|..||..... ..
T Consensus 186 fG~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~ 258 (370)
T cd05596 186 FGTCMKMDANGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 258 (370)
T ss_pred ccceeeccCCCc-----ccCCCCCCCcCeECHHHhccCCC--CCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHH
Confidence 999987643211 11122345668999999865210 12367799999999999999999999864321 11
Q ss_pred c------------CCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 249 T------------ASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 249 ~------------~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
+ ..++..+.+++++||..+|.+ |+++.++++|+
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 259 IMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred HHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 1 135667888999999999987 99999999998
No 69
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7e-32 Score=290.59 Aligned_cols=240 Identities=18% Similarity=0.263 Sum_probs=190.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+-..|++.++||.|+ | .||+|+++.+++.|+||.+...... .....+.+|+.+++.|+||||++++++++.+
T Consensus 4 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~---- 76 (301)
T cd07873 4 KLETYIKLDKLGEGTYA--TVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTE---- 76 (301)
T ss_pred cccceEEeeEeccCcCE--EEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecC----
Confidence 345799999999998 7 8999999999999999999754332 2234567899999999999999999999864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 77 ----~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~dfg 149 (301)
T cd07873 77 ----KSLTLVFEYLDKDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHR-RKVLHRDLKPQNLLINERGELKLADFG 149 (301)
T ss_pred ----CeEEEEEeccccCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHHHEEECCCCcEEECcCc
Confidence 4899999999 578888765432 12344566679999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 150 ~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~ 218 (301)
T cd07873 150 LARAKSIPTKT------YSNEVVTLWYRPPDILLGS-----TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIF 218 (301)
T ss_pred chhccCCCCCc------ccccceeecccCcHHHhCC-----CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 98765432110 1112335589999997653 34667899999999999999999887532110
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~ 287 (301)
T cd07873 219 RILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP 287 (301)
T ss_pred HHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0013456678899999999999999999999998
No 70
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-32 Score=299.30 Aligned_cols=238 Identities=17% Similarity=0.251 Sum_probs=187.6
Q ss_pred CceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+|++.+.||.|+ | +||.+++. .++..|+||++.+... .....+.+.+|+++|+.++ ||||+++++.++.+
T Consensus 1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~- 77 (332)
T cd05614 1 NFELLKVLGTGAYG--KVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE- 77 (332)
T ss_pred CceEEEEEeecCCE--EEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC-
Confidence 599999999998 8 88888764 5789999999975321 2234566789999999995 99999999999864
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 78 -------~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 78 -------AKLHLILDYVSGGEMFTHLYQRDN---FSEDEVRFYSGEIILALEHLHK-LGIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred -------CEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHeEECCCCCEEE
Confidence 3899999999 579888876542 2344566679999999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||+++.+...... ......++..|+|||++.+. ..++.++|+|||||++|||++|..||....
T Consensus 147 ~DfG~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 216 (332)
T cd05614 147 TDFGLSKEFLSEEKE-----RTYSFCGTIEYMAPEIIRGK-----GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ 216 (332)
T ss_pred eeCcCCccccccCCC-----ccccccCCccccCHHHhcCC-----CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH
Confidence 999998765432111 11123455689999998753 245678999999999999999999885311
Q ss_pred --hh-c--------cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 246 --LR-N--------TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 246 --l~-~--------~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
+. . ...++..+.+++.+||+.||++|+ ++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 217 SEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 10 0 124566788999999999999999 788999998
No 71
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.8e-32 Score=306.45 Aligned_cols=193 Identities=22% Similarity=0.286 Sum_probs=167.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-C-----CCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-H-----PNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-H-----PnIlk~~d~~e~e~ 92 (778)
+|+|.+.||.|. | .|.+|.++.+++.||||+++.+ .....+...|+++|..|+ | -|||+++|+|..
T Consensus 187 rY~V~e~LGkGtFG--QVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-- 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFG--QVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-- 259 (586)
T ss_pred EEEEEEEecccccc--eeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc--
Confidence 789999999999 9 9999999999999999999753 346678889999999998 3 379999999987
Q ss_pred cccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC--CcEE
Q 004025 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT--LDWK 169 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~--g~~K 169 (778)
+.++|||+|.. .+|+++|+.....+.. ...++.++.||+.||.||| +.+||||||||+||++... ..+|
T Consensus 260 ------r~HlciVfELL~~NLYellK~n~f~Gls-l~~ir~~~~Qil~~L~~L~-~l~IIHcDLKPENILL~~~~r~~vK 331 (586)
T KOG0667|consen 260 ------RNHLCIVFELLSTNLYELLKNNKFRGLS-LPLVRKFAQQILTALLFLH-ELGIIHCDLKPENILLKDPKRSRIK 331 (586)
T ss_pred ------ccceeeeehhhhhhHHHHHHhcCCCCCC-HHHHHHHHHHHHHHHHHHH-hCCeeeccCChhheeeccCCcCcee
Confidence 45999999999 6899999998877643 4457888999999999999 4999999999999999743 4799
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
++|||.++..... .+.++...-|+|||++.+ ..|..++|||||||++.||++|.++|.
T Consensus 332 VIDFGSSc~~~q~---------vytYiQSRfYRAPEVILG------lpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 332 VIDFGSSCFESQR---------VYTYIQSRFYRAPEVILG------LPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred EEecccccccCCc---------ceeeeeccccccchhhcc------CCCCCccceeehhhhHHhHhcCccccC
Confidence 9999999887652 224567778999999998 478899999999999999999998874
No 72
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.3e-31 Score=280.11 Aligned_cols=238 Identities=16% Similarity=0.144 Sum_probs=192.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|. | .||+|+++.+++.|++|.+............+.+|+++++.++||||+++++.+..+
T Consensus 1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (256)
T cd08529 1 DFEILNKIGKGSFG--VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK------- 71 (256)
T ss_pred CceEeEEecCCCCe--EEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-------
Confidence 488899999987 6 899999999999999999986544455567788999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~~l~~al~~lH~-~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 72 -GKLNIVMEYAENGDLHKLLKMQRGR-PLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred -CEEEEEEEeCCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 4899999999 4799998775221 22334456668899999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------- 247 (778)
..+...... .....+...|+|||+..+. .++.++|+|||||++|+|++|..||......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (256)
T cd08529 149 KLLSDNTNF------ANTIVGTPYYLSPELCEDK------PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG 216 (256)
T ss_pred eeccCccch------hhccccCccccCHHHhcCC------CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 876542110 1112344579999998763 4667899999999999999999887543210
Q ss_pred cc----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 NT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ..++..+.+++.+|++.+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~ 254 (256)
T cd08529 217 VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254 (256)
T ss_pred CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCC
Confidence 01 24567789999999999999999999999997
No 73
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-31 Score=281.95 Aligned_cols=239 Identities=14% Similarity=0.195 Sum_probs=190.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~---~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+|++++.+|.|+ | .||.|+++.++++|+||.+....... .....+.+|++++++++||||++++++++.+
T Consensus 3 ~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 76 (263)
T cd06625 3 NWRRGKLLGQGAFG--RVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD---- 76 (263)
T ss_pred cccccceecCCCce--EEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC----
Confidence 699999999998 8 89999999999999999987543222 2356788999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+|+||+ +.|.+++..... .....+..+++||+.||.|||. .+++||||+|+||+++.+|.+||+||
T Consensus 77 ----~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nilv~~~~~~~l~df 148 (263)
T cd06625 77 ----ETLSIFMEYMPGGSVKDQLKAYGA---LTETVTRKYTRQILEGVEYLHS-NMIVHRDIKGANILRDSAGNVKLGDF 148 (263)
T ss_pred ----CeEEEEEEECCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeec
Confidence 3899999999 468888876543 2344456679999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++............ .....+...|+|||++.+. .++.++|+|||||++|||++|+.||...+..
T Consensus 149 g~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 219 (263)
T cd06625 149 GASKRLQTICSSGTG---MKSVTGTPYWMSPEVISGE------GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI 219 (263)
T ss_pred ccceecccccccccc---ccCCCcCccccCcceeccC------CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH
Confidence 998765432110000 0112234589999998863 4678999999999999999999887532110
Q ss_pred ----c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++++||..+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 220 ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 0 124566788999999999999999999999997
No 74
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.7e-33 Score=275.04 Aligned_cols=242 Identities=19% Similarity=0.276 Sum_probs=199.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.-.+|++|+.+|.|- | .||.|+.+.++-.|++|++.++.... ....++++|+.+-..|+||||++.|..|.++
T Consensus 20 ~l~dfeigr~LgkgkFG--~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~--- 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFG--NVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS--- 94 (281)
T ss_pred chhhccccccccCCccc--cEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc---
Confidence 345799999999988 9 99999999999999999999865333 3456789999999999999999999999975
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+++||. +.|...|......... +.+-+-+++|++.||.|+|. ++++||||||+|++++.+|.+||+|
T Consensus 95 -----~riyLilEya~~gel~k~L~~~~~~~f~-e~~~a~Yi~q~A~Al~y~h~-k~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 -----KRIYLILEYAPRGELYKDLQEGRMKRFD-EQRAATYIKQLANALLYCHL-KRVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred -----ceeEEEEEecCCchHHHHHHhccccccc-ccchhHHHHHHHHHHHHhcc-CCcccCCCCHHHhccCCCCCeeccC
Confidence 4899999999 5699998854422111 11223349999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||.+..-.. + .+...+++..|.|||+..+ ..++..+|+|++|++.||++.|.+||....-..
T Consensus 168 fGwsV~~p~-~-------kR~tlcgt~dyl~pEmv~~------~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr 233 (281)
T KOG0580|consen 168 FGWSVHAPS-N-------KRKTLCGTLDYLPPEMVEG------RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR 233 (281)
T ss_pred CCceeecCC-C-------CceeeecccccCCHhhcCC------CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH
Confidence 998765432 1 1223355669999999988 577889999999999999999999997654222
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMT 288 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~ 288 (778)
...|+....+++.+|+..+|..|....++++|+ |+.
T Consensus 234 I~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp----wI~ 277 (281)
T KOG0580|consen 234 IRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHP----WIV 277 (281)
T ss_pred HHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhhH----HHH
Confidence 146777889999999999999999999999998 764
No 75
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.4e-32 Score=299.97 Aligned_cols=231 Identities=16% Similarity=0.205 Sum_probs=183.7
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
.||.|+ | +||.++++.+|..|+||++.+... .......+.+|+++++.++||||+++++.++.+ ..+|
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--------~~~~ 71 (325)
T cd05594 2 LLGKGTFG--KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--------DRLC 71 (325)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--------CEEE
Confidence 577887 8 999999999999999999986422 123345677899999999999999999999864 4899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|..++..... .....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~E~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~ 148 (325)
T cd05594 72 FVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 148 (325)
T ss_pred EEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence 999999 478888766442 234446667899999999999547999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------------cc
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------------~~ 249 (778)
.... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||...... -.
T Consensus 149 ~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p 216 (325)
T cd05594 149 DGAT------MKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 216 (325)
T ss_pred CCcc------cccccCCcccCCHHHHcc------CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 2110 111235568999999876 35678999999999999999999888532211 01
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..+++.+.+++++||..||.+|+ ++.++++|+
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence 24567788999999999999997 899999998
No 76
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.9e-32 Score=303.24 Aligned_cols=242 Identities=11% Similarity=0.142 Sum_probs=187.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|+++|+.++||||+++++.+++.
T Consensus 2 ~f~~~~~LG~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~------ 73 (381)
T cd05626 2 MFVKIKTLGIGAFG--EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK------ 73 (381)
T ss_pred CceEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC------
Confidence 589999999998 8 999999999999999999986432 224566789999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| ++|.+++..... .....++.++.||+.||.|||+ .+|+||||||+||+|+.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~aL~~LH~-~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 74 --DNLYFVMDYIPGGDMMSLLIRMEV---FPEVLARFYIAELTLAIESVHK-MGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 4899999999 479998876543 2344566678999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCC---C--------------------------------------CCccccccccCCCCCCccccccccccc
Q 004025 176 LSEFDGNNEAA---N--------------------------------------GPMLQYAWLVGAQYKPVELAKSDWTAV 214 (778)
Q Consensus 176 a~~~~~~~~~~---~--------------------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (778)
+..+....... . .........++..|+|||++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----- 222 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR----- 222 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-----
Confidence 76442110000 0 0000112245568999999876
Q ss_pred cCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------h---cc------CCCCcchHHHHHHHhcc--CCCCCCChHH
Q 004025 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R---NT------ASIPKSLLPDYQRLLSS--MPSRRLNSSK 276 (778)
Q Consensus 215 ~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~---~~------~~iP~~L~~~i~~lL~~--dP~~Rps~~~ 276 (778)
..++.++|+|||||++|||++|..||..... . .. ..++..+.+++.+|+.. ++..|+++.+
T Consensus 223 -~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 223 -KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred -CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 3567899999999999999999999853211 0 01 13556678888886644 5556999999
Q ss_pred HHhcc
Q 004025 277 LIENS 281 (778)
Q Consensus 277 lL~~~ 281 (778)
+++|+
T Consensus 302 ~l~hp 306 (381)
T cd05626 302 IKAHP 306 (381)
T ss_pred HhcCc
Confidence 99998
No 77
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.9e-32 Score=288.52 Aligned_cols=238 Identities=18% Similarity=0.248 Sum_probs=187.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | +||+|+++.+|+.|++|.+......+.....+.+|++.++.++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~------- 71 (284)
T cd07839 1 KYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD------- 71 (284)
T ss_pred CceeEEEecccCCe--EEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-------
Confidence 589999999987 7 899999999999999999986544333445677899999999999999999999863
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+|+||+ ++|..++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 72 -KKLTLVFEYCDQDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHS-HNVLHRDLKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred -CceEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEcCCCcEEECccchhh
Confidence 4899999999 578887765331 12344566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC-Chhh----hh-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEE----LR----- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~-~~~~----l~----- 247 (778)
........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|+.|+ .... +.
T Consensus 148 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 216 (284)
T cd07839 148 AFGIPVRC------YSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 216 (284)
T ss_pred ccCCCCCC------cCCCccccCCcChHHHhCC-----cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHH
Confidence 65432110 0111334589999997653 34577899999999999999987663 2111 00
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+|||+.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 217 LGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred hCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 0123456678899999999999999999999998
No 78
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.98 E-value=1.3e-31 Score=292.34 Aligned_cols=244 Identities=14% Similarity=0.134 Sum_probs=187.6
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+.+.||.|. +.++||.++++.+|+.|+||.++.....+...+.+++|+++++.++||||+++++++..+ ..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--------~~ 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--------NE 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--------CE
Confidence 567888886 555999999999999999999987655555667888999999999999999999999874 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+|+||||+ ++|.+++....... .....+.+++.||+.||.|||+ .+++||||||+||+++.++.++|+||+.+...
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~-~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~ 151 (327)
T cd08227 74 LWVVTSFMAYGSAKDLICTHFMDG-MSELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISVDGKVYLSGLRSNLSM 151 (327)
T ss_pred EEEEEeccCCCcHHHHHHhhccCC-CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCChhhEEEecCCcEEEcccchhhcc
Confidence 99999999 57988887643221 2344567789999999999995 99999999999999999999999999876544
Q ss_pred CCCCCCCC--CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---------
Q 004025 180 DGNNEAAN--GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--------- 248 (778)
Q Consensus 180 ~~~~~~~~--~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--------- 248 (778)
........ ... ......+..|+|||++.+.. ..++.++|+|||||++|||++|..||.......
T Consensus 152 ~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 226 (327)
T cd08227 152 INHGQRLRVVHDF-PKYSVKVLPWLSPEVLQQNL----QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT 226 (327)
T ss_pred ccccccccccccc-cccccceecccChHHhhccc----CCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCC
Confidence 32111000 000 01112334799999987531 246678999999999999999998875211000
Q ss_pred -------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 249 -------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 249 -------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
...++..+.+++++||+.||.+||+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 227 VPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0012345778899999999999999999999
Q ss_pred cc
Q 004025 280 NS 281 (778)
Q Consensus 280 ~~ 281 (778)
|+
T Consensus 307 ~p 308 (327)
T cd08227 307 HS 308 (327)
T ss_pred Ch
Confidence 98
No 79
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.98 E-value=1.5e-32 Score=305.82 Aligned_cols=241 Identities=12% Similarity=0.174 Sum_probs=187.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|+++|+.++||||+++++.++.+
T Consensus 2 ~y~~~~~lG~G~~g--~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------ 73 (376)
T cd05598 2 MFVKIKTIGIGAFG--EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK------ 73 (376)
T ss_pred CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Confidence 599999999998 8 999999999999999999975321 123356688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|.+++...+. .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~~~~ikL~DFG~ 147 (376)
T cd05598 74 --DNLYFVMDYIPGGDMMSLLIRLGI---FEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (376)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence 4899999999 579999877543 2344456668999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-------------------------------------CCCccccccccCCCCCCccccccccccccCCC
Q 004025 176 LSEFDGNNEAA-------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSP 218 (778)
Q Consensus 176 a~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~ 218 (778)
+..+....... ..........++..|+|||++.+ ..+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~ 221 (376)
T cd05598 148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR------TGY 221 (376)
T ss_pred CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC------CCC
Confidence 86432100000 00000011235568999999876 356
Q ss_pred CCcchhHHHHHHHHHHHhCCCCCChhhhh----c------------cCCCCcchHHHHHHHhccCCCCCC---ChHHHHh
Q 004025 219 PWSIDSWGLGCLIYELFSGMRLSKTEELR----N------------TASIPKSLLPDYQRLLSSMPSRRL---NSSKLIE 279 (778)
Q Consensus 219 ~~~~DiwSLG~liyel~tg~~p~~~~~l~----~------------~~~iP~~L~~~i~~lL~~dP~~Rp---s~~~lL~ 279 (778)
+.++|+|||||++|||++|..||...... . ...++..+.+++.+|+ .+|..|+ ++.++++
T Consensus 222 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 222 TQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred CcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 78999999999999999999998643210 0 1235566788888876 5999999 9999999
Q ss_pred cc
Q 004025 280 NS 281 (778)
Q Consensus 280 ~~ 281 (778)
|+
T Consensus 301 h~ 302 (376)
T cd05598 301 HP 302 (376)
T ss_pred CC
Confidence 98
No 80
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.98 E-value=6.8e-32 Score=295.71 Aligned_cols=244 Identities=16% Similarity=0.177 Sum_probs=185.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~ 88 (778)
++..+|++++.||.|+ | +||+|.+ +.++..|+||++.... .......+.+|+++|+.+ +||||+++++.+
T Consensus 4 ~~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFG--KVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred cchhHceeeeEeccCCcc--eEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 3556899999999998 8 8999974 3456789999987542 223456788999999999 899999999988
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------------------------------------------
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------------------------------- 122 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------------------------------------- 122 (778)
...+ ..+|+||||+ ++|.+++......
T Consensus 81 ~~~~-------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T cd05102 81 TKPN-------GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPST 153 (338)
T ss_pred cCCC-------CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcccccccccc
Confidence 7532 3689999999 6899988753210
Q ss_pred ---------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCC
Q 004025 123 ---------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187 (778)
Q Consensus 123 ---------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~ 187 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++........
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~-- 230 (338)
T cd05102 154 SGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-- 230 (338)
T ss_pred CcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECCCCccceEEEcCCCcEEEeecccccccccCcch--
Confidence 001123345568899999999995 89999999999999999999999999999866432110
Q ss_pred CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh--------h------ccCCC
Q 004025 188 GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--------R------NTASI 252 (778)
Q Consensus 188 ~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l--------~------~~~~i 252 (778)
........+..|+|||++.+ ..++.++|+|||||++|||++ |..||..... . ....+
T Consensus 231 --~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (338)
T cd05102 231 --VRKGSARLPLKWMAPESIFD------KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENA 302 (338)
T ss_pred --hcccCCCCCccccCcHHhhc------CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCC
Confidence 00111122347999999876 356789999999999999997 8888754211 0 11245
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 253 PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 253 P~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|..+..++.+||..+|..||++.++++.
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~ 330 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEI 330 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6678899999999999999999999864
No 81
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.98 E-value=3.4e-32 Score=303.08 Aligned_cols=241 Identities=14% Similarity=0.211 Sum_probs=186.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+++++.+|+.|+||++.+... .......+++|+++++.++||||+++++++++.
T Consensus 2 ~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------ 73 (377)
T cd05629 2 DFHTVKVIGKGAFG--EVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA------ 73 (377)
T ss_pred CceEeEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Confidence 699999999998 8 999999999999999999875322 223456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NIll~~~~~~kl~DfGl 147 (377)
T cd05629 74 --QYLYLIMEFLPGGDLMTMLIKYDT---FSEDVTRFYMAECVLAIEAVHK-LGFIHRDIKPDNILIDRGGHIKLSDFGL 147 (377)
T ss_pred --CeeEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCCCEEEeeccc
Confidence 4899999999 579988876542 2344566679999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------CC------------------------------CccccccccCCCCCCccccccccccc
Q 004025 176 LSEFDGNNEAA-----------NG------------------------------PMLQYAWLVGAQYKPVELAKSDWTAV 214 (778)
Q Consensus 176 a~~~~~~~~~~-----------~~------------------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (778)
++.+....... .. ........++..|+|||++.+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----- 222 (377)
T cd05629 148 STGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ----- 222 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-----
Confidence 86432210000 00 000011235568999999876
Q ss_pred cCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc------cC------CCCcchHHHHHHHhccCCCCC---CChH
Q 004025 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN------TA------SIPKSLLPDYQRLLSSMPSRR---LNSS 275 (778)
Q Consensus 215 ~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~------~~------~iP~~L~~~i~~lL~~dP~~R---ps~~ 275 (778)
..++.++|+|||||++|||++|.+||.... ... .. .++..+.+++.+||. +|..| +++.
T Consensus 223 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 223 -QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred -CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 357789999999999999999999985321 111 11 244567889999997 66655 5999
Q ss_pred HHHhcc
Q 004025 276 KLIENS 281 (778)
Q Consensus 276 ~lL~~~ 281 (778)
++++|+
T Consensus 301 ~~l~hp 306 (377)
T cd05629 301 EIKSHP 306 (377)
T ss_pred HHhcCC
Confidence 999998
No 82
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.98 E-value=6.3e-32 Score=294.54 Aligned_cols=236 Identities=18% Similarity=0.224 Sum_probs=186.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~ 96 (778)
+|++.+.||.|+ | +||+|+++.+++.|+||++.+... .+........|.+++..+ +||+|++++++++..
T Consensus 1 df~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (323)
T cd05616 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM----- 73 (323)
T ss_pred CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-----
Confidence 589999999998 8 999999999999999999986432 123344566778888777 489999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~E~~~~g~L~~~~~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 74 ---DRLYFVMEYVNGGDLMYQIQQVGRF---KEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---CEEEEEEcCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCEEecCCCHHHeEECCCCcEEEccCC
Confidence 3899999999 5798888765432 234456669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~ 214 (323)
T cd05616 147 MCKENMWDGV------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 214 (323)
T ss_pred CceecCCCCC------ccccCCCChhhcCHHHhcC------CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875432111 1112234568999999876 357789999999999999999999986432111
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+|++. .++++|+
T Consensus 215 ~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~ 258 (323)
T cd05616 215 EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 258 (323)
T ss_pred hCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCC
Confidence 12456778889999999999999985 7888887
No 83
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.98 E-value=2.2e-31 Score=283.34 Aligned_cols=239 Identities=19% Similarity=0.278 Sum_probs=192.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||+|+++.+|+.|+||++......+...+.+.+|+..+++++||||+++++.+...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (286)
T cd07832 1 RYKILGRIGEGAHG--IVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG------- 71 (286)
T ss_pred CceEEeecccCCCc--EEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC-------
Confidence 589999999998 8 899999999999999999987654444566788999999999999999999999863
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+|+||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||++.
T Consensus 72 -~~~~~v~e~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~ 147 (286)
T cd07832 72 -SGFVLVMEYMPSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHA-NGIMHRDLKPANLLISADGVLKIADFGLAR 147 (286)
T ss_pred -CeeEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence 4899999999 569888876441 12344466679999999999995 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------h--
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------R-- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------~-- 247 (778)
........ ......++..|+|||++.+. ..++.++|+|||||++|||++|.++|..... .
T Consensus 148 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~ 217 (286)
T cd07832 148 LFSEEEPR-----LYSHQVATRWYRAPELLYGA-----RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTL 217 (286)
T ss_pred cccCCCCC-----ccccccCcccccCceeeecc-----ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHc
Confidence 77543210 01112345589999997653 3457799999999999999999877743210 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 218 GTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred CCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0123456778899999999999999999999998
No 84
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.98 E-value=6.7e-32 Score=299.32 Aligned_cols=242 Identities=12% Similarity=0.135 Sum_probs=186.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.|+++.+++.|+||++.+.... ......+++|+.+++.++||||+++++.++++
T Consensus 2 ~y~~~~~LG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~------ 73 (363)
T cd05628 2 DFESLKVIGRGAFG--EVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK------ 73 (363)
T ss_pred CceEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC------
Confidence 699999999998 8 9999999999999999999764221 23456788999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|.+++...+. .....++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~-~givHrDlKp~NILi~~~~~vkL~DFGl 147 (363)
T cd05628 74 --LNLYLIMEFLPGGDMMTLLMKKDT---LTEEETQFYIAETVLAIDSIHQ-LGFIHRDIKPDNLLLDSKGHVKLSDFGL 147 (363)
T ss_pred --CeEEEEEcCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCCCEEEeeccC
Confidence 4899999999 479998876543 2344566779999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------------------------CCccccccccCCCCCCccccccccccccCCCCCcchhHH
Q 004025 176 LSEFDGNNEAAN-----------------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (778)
Q Consensus 176 a~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwS 226 (778)
++.+........ .........++..|+|||++.+ ..++.++|+||
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~~DvwS 221 (363)
T cd05628 148 CTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ------TGYNKLCDWWS 221 (363)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC------CCCCCchhhhh
Confidence 876543110000 0000112345568999999876 35778999999
Q ss_pred HHHHHHHHHhCCCCCChhhh----hcc------C------CCCcchHHHHHHHhcc--CCCCCCChHHHHhcc
Q 004025 227 LGCLIYELFSGMRLSKTEEL----RNT------A------SIPKSLLPDYQRLLSS--MPSRRLNSSKLIENS 281 (778)
Q Consensus 227 LG~liyel~tg~~p~~~~~l----~~~------~------~iP~~L~~~i~~lL~~--dP~~Rps~~~lL~~~ 281 (778)
|||++|||++|..||..... ..+ . .++..+.+++.+|+.. ++..||++.++++|+
T Consensus 222 lGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp 294 (363)
T cd05628 222 LGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNP 294 (363)
T ss_pred hHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCC
Confidence 99999999999999864221 111 1 2344567777776642 334568999999998
No 85
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-31 Score=296.30 Aligned_cols=241 Identities=20% Similarity=0.269 Sum_probs=201.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~ 94 (778)
...|++++.||.|. | .||.++.+.+|+.+|+|++.+..... ...+.+.+|+++|++|. ||||+.+++.||+.
T Consensus 34 ~~~Y~l~~~lG~G~Fg--~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~--- 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFG--VVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP--- 108 (382)
T ss_pred cccEEehhhhCCCCce--EEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC---
Confidence 34699999999999 8 99999999999999999999865433 23568999999999998 99999999999985
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC----CcE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----LDW 168 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~----g~~ 168 (778)
.++|||||+| +.|.+.|.... ..+......+.||+.+++|||+ .+++||||||+|+++... +.+
T Consensus 109 -----~~~~lvmEL~~GGeLfd~i~~~~----~sE~da~~~~~~il~av~~lH~-~gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 109 -----DSVYLVMELCEGGELFDRIVKKH----YSERDAAGIIRQILEAVKYLHS-LGVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred -----CeEEEEEEecCCchHHHHHHHcc----CCHHHHHHHHHHHHHHHHHHHh-CCceeccCCHHHeeeccccCCCCcE
Confidence 4999999999 56888887761 3344456679999999999996 999999999999999733 579
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR- 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~- 247 (778)
|++|||++...... ......++++.|+|||++.. ..+...+||||+|+++|.|++|.+||..+.-.
T Consensus 179 k~~DFGla~~~~~~-------~~~~~~~Gtp~y~APEvl~~------~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~ 245 (382)
T KOG0032|consen 179 KLIDFGLAKFIKPG-------ERLHTIVGTPEYVAPEVLGG------RPYGDEVDVWSIGVILYILLSGVPPFWGETEFE 245 (382)
T ss_pred EEeeCCCceEccCC-------ceEeeecCCccccCchhhcC------CCCCcccchhHHHHHHHHHhhCCCCCcCCChhH
Confidence 99999999887651 11233466679999999886 47888999999999999999999998654311
Q ss_pred ---------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 248 ---------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 248 ---------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
....+...+.+++++||..||.+|+++.++|+|| |+.+.
T Consensus 246 ~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~Hp----Wi~~~ 299 (382)
T KOG0032|consen 246 IFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHP----WIKSI 299 (382)
T ss_pred HHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCc----cccCC
Confidence 1145677789999999999999999999999999 87654
No 86
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=5.8e-32 Score=294.80 Aligned_cols=230 Identities=15% Similarity=0.188 Sum_probs=179.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHH-HHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|.. .++.++||||+++++.++.. ..+
T Consensus 2 ~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~--------~~~ 71 (323)
T cd05575 2 VIGKGSFG--KVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA--------DKL 71 (323)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC--------CEE
Confidence 577787 7 9999999999999999999864221 122233444444 56889999999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~ 147 (323)
T cd05575 72 YFVLDYVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHS-LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (323)
T ss_pred EEEEcCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCCcEEEeccCCCcccc
Confidence 9999999 578888876442 2344566679999999999995 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------------c
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------N 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------------~ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (323)
T cd05575 148 EHSK------TTSTFCGTPEYLAPEVLRK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL 215 (323)
T ss_pred cCCC------ccccccCChhhcChhhhcC------CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 2111 0112234568999999876 35678999999999999999999988543211 1
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
...++..+.+++++||..+|.+|+++ .++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~ 252 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHV 252 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCC
Confidence 13467788999999999999999987 5889987
No 87
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.98 E-value=6.4e-32 Score=300.47 Aligned_cols=243 Identities=14% Similarity=0.150 Sum_probs=190.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | .||.++++.+++.|++|++.+... .......+.+|+.+++.++||||+++++.++++
T Consensus 41 ~~~~y~~~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--- 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFG--EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD--- 115 (370)
T ss_pred CHHHCeEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC---
Confidence 345799999999998 8 999999999999999999975322 223345678999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++|+||||| ++|.+++..... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 116 -----~~~~lv~Ey~~gg~L~~~l~~~~~----~~~~~~~~~~qil~aL~~LH~-~~IvHrDLKp~NILl~~~~~~kL~D 185 (370)
T cd05621 116 -----KYLYMVMEYMPGGDLVNLMSNYDV----PEKWAKFYTAEVVLALDAIHS-MGLIHRDVKPDNMLLDKHGHLKLAD 185 (370)
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCCCEEEEe
Confidence 4899999999 579998876532 344566679999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~ 248 (778)
||++..+..... .......++..|+|||++.+.- ....++.++|+|||||++|||++|..||..... ..
T Consensus 186 FG~a~~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~ 258 (370)
T cd05621 186 FGTCMKMDETGM-----VRCDTAVGTPDYISPEVLKSQG--GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK 258 (370)
T ss_pred cccceecccCCc-----eecccCCCCcccCCHHHHhccC--CCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987653211 1111234566899999986521 012356799999999999999999999864321 10
Q ss_pred ------cC------CCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 249 ------TA------SIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 249 ------~~------~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
.. .++..+..++.+||..++.+ |+++.++++|+
T Consensus 259 i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 259 IMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred HHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 11 34556788889999865544 89999999998
No 88
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.98 E-value=5e-32 Score=302.27 Aligned_cols=241 Identities=12% Similarity=0.176 Sum_probs=187.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+.+|+++|+.++||||+++++.+.++
T Consensus 2 ~f~~~~~LG~G~~g--~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~------ 73 (382)
T cd05625 2 MFVKIKTLGIGAFG--EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK------ 73 (382)
T ss_pred CcEEEEEEEeCCCE--EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC------
Confidence 589999999998 8 999999999999999999975422 224456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| ++|.+++.+.+. ..+..++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~al~~lH~-~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 74 --DNLYFVMDYIPGGDMMSLLIRMGI---FPEDLARFYIAELTCAVESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 4899999999 479888876542 2344566679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------------------------CCCccccccccCCCCCCccccccccccc
Q 004025 176 LSEFDGNNEAA-----------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAV 214 (778)
Q Consensus 176 a~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (778)
+..+....... ..........++..|+|||++.+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----- 222 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR----- 222 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-----
Confidence 86432110000 00000111234568999999876
Q ss_pred cCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc------------cCCCCcchHHHHHHHhccCCCCCCC---hH
Q 004025 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN------------TASIPKSLLPDYQRLLSSMPSRRLN---SS 275 (778)
Q Consensus 215 ~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~------------~~~iP~~L~~~i~~lL~~dP~~Rps---~~ 275 (778)
..++.++|+|||||++|||++|.+||..... .. ...++..+.+++.+|+ .+|.+|++ +.
T Consensus 223 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 223 -TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred -CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 3577899999999999999999999864211 00 1235566788888876 59999997 99
Q ss_pred HHHhcc
Q 004025 276 KLIENS 281 (778)
Q Consensus 276 ~lL~~~ 281 (778)
++++|+
T Consensus 301 ei~~hp 306 (382)
T cd05625 301 EIKAHP 306 (382)
T ss_pred HHhcCC
Confidence 999998
No 89
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.98 E-value=8.1e-32 Score=293.77 Aligned_cols=231 Identities=17% Similarity=0.261 Sum_probs=182.3
Q ss_pred cCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 25 DPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+.||.|+ | +||.+++. .+++.|+||++.+... .......+.+|+.+|+.++||||+++++.++.+
T Consensus 2 ~~lg~G~~g--~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------- 72 (323)
T cd05584 2 KVLGKGGYG--KVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG------- 72 (323)
T ss_pred ceeeecCCe--EEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC-------
Confidence 4678887 7 89998864 5688999999975321 123345678999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++...+. .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 73 -GKLYLILEYLSGGELFMHLEREGI---FMEDTACFYLSEISLALEHLHQ-QGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred -CeEEEEEeCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 3899999999 479888876543 2344566679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------c
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~ 248 (778)
........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 148 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~ 215 (323)
T cd05584 148 KESIHEGT------VTHTFCGTIEYMAPEILMR------SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG 215 (323)
T ss_pred eecccCCC------cccccCCCccccChhhccC------CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 75433211 1112234568999999876 35667999999999999999999998643211 1
Q ss_pred c----CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 T----ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 ~----~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. ..++..+.+++++||..+|.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 216 KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence 1 23456678999999999999999 899999998
No 90
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-32 Score=304.88 Aligned_cols=246 Identities=15% Similarity=0.229 Sum_probs=198.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+...+|.+...+|.|. | +|+.+..|.+++.+|||++++... .+..++..+.|-+++.... ||.++.++.+|.+.
T Consensus 365 ~~l~~F~~l~vLGkGsFG--kV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~- 441 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFG--KVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK- 441 (694)
T ss_pred ccccceEEEEEeccCcCc--eEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC-
Confidence 3445799999999999 9 999999999999999999997642 2345778889999888885 99999999999984
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
.++|+||||+ +++..+.+..... +.....+...|+.||.||| +.+|||||||.+||+++.+|.+||
T Consensus 442 -------~~l~fvmey~~Ggdm~~~~~~~~F~----e~rarfyaAev~l~L~fLH-~~~IIYRDlKLdNiLLD~eGh~ki 509 (694)
T KOG0694|consen 442 -------EHLFFVMEYVAGGDLMHHIHTDVFS----EPRARFYAAEVVLGLQFLH-ENGIIYRDLKLDNLLLDTEGHVKI 509 (694)
T ss_pred -------CeEEEEEEecCCCcEEEEEeccccc----HHHHHHHHHHHHHHHHHHH-hcCceeeecchhheEEcccCcEEe
Confidence 4999999999 4544333322222 2234556899999999999 599999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT- 249 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~- 249 (778)
+|||+|+.....+ .....+++++.|+|||++.+ ..|+.++|+|+||+|||||+.|..||..++-..+
T Consensus 510 ADFGlcKe~m~~g------~~TsTfCGTpey~aPEil~e------~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~F 577 (694)
T KOG0694|consen 510 ADFGLCKEGMGQG------DRTSTFCGTPEFLAPEVLTE------QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVF 577 (694)
T ss_pred cccccccccCCCC------CccccccCChhhcChhhhcc------CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 9999998765322 13455678889999999998 5899999999999999999999999975432221
Q ss_pred -----------CCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcccCCccccccccchhh
Q 004025 250 -----------ASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSVGDFWMTEYFQNKLV 296 (778)
Q Consensus 250 -----------~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~~~~~w~~~ff~n~lv 296 (778)
.-++.+...++++||..||++|+.. .++.+|| ||++.-.
T Consensus 578 dsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hp--------FFr~i~w 632 (694)
T KOG0694|consen 578 DSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHP--------FFRSIDW 632 (694)
T ss_pred HHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCC--------ccccCCH
Confidence 2345667788999999999999975 6777786 8876443
No 91
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.98 E-value=6.5e-32 Score=294.26 Aligned_cols=230 Identities=17% Similarity=0.220 Sum_probs=182.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.+... .+...+.+.+|..+++.+ +||||++++++++.. ..+
T Consensus 2 ~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--------~~~ 71 (320)
T cd05590 2 VLGKGSFG--KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--------DRL 71 (320)
T ss_pred eeeeCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--------CEE
Confidence 577787 7 999999999999999999975421 223455677888888876 699999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~iv~Ey~~~g~L~~~i~~~~~---l~~~~~~~~~~ql~~~L~~lH~-~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 72 FFVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEITSALMFLHD-KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 147 (320)
T ss_pred EEEEcCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecC
Confidence 9999999 478888876543 2344466679999999999995 999999999999999999999999999987643
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~ 215 (320)
T cd05590 148 FNGK------TTSTFCGTPDYIAPEILQE------MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY 215 (320)
T ss_pred cCCC------cccccccCccccCHHHHcC------CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 2111 1112245568999999876 356778999999999999999999986432111
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh------HHHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~------~~lL~~~ 281 (778)
...++..+.+++++||..||.+|+++ .++++|+
T Consensus 216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~ 254 (320)
T cd05590 216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHP 254 (320)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCC
Confidence 12356678899999999999999998 8899997
No 92
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=5.3e-32 Score=294.81 Aligned_cols=247 Identities=18% Similarity=0.258 Sum_probs=199.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
+.+-.|++.++||+|+ + .||++.. .+.+.|++|.+.....++..+.-+++|+..|.+|+ |-+|++++|+-..+
T Consensus 358 Vkg~~Yeilk~iG~GGSS--kV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-- 432 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSS--KVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-- 432 (677)
T ss_pred ECcchhhHHHhhcCCCcc--eeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC--
Confidence 4566799999999997 5 8999985 46788888888776677778889999999999997 99999999987764
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||- .+|..+|+.+..... .-+++.+.+|++.|++++|. .+|||.||||.|+++ -.|.+||+|
T Consensus 433 ------~~lYmvmE~Gd~DL~kiL~k~~~~~~--~~~lk~ywkqML~aV~~IH~-~gIVHSDLKPANFLl-VkG~LKLID 502 (677)
T KOG0596|consen 433 ------GYLYMVMECGDIDLNKILKKKKSIDP--DWFLKFYWKQMLLAVKTIHQ-HGIVHSDLKPANFLL-VKGRLKLID 502 (677)
T ss_pred ------ceEEEEeecccccHHHHHHhccCCCc--hHHHHHHHHHHHHHHHHHHH-hceeecCCCcccEEE-EeeeEEeee
Confidence 3999999988 589999998764322 22577779999999999994 999999999999988 568999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccc-----cCCCCCcchhHHHHHHHHHHHhCCCCCChhh--
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV-----RKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~-----~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-- 245 (778)
||++..+..+ ...+.....+++..||+||.+...-... +-....++|||||||+||+|+.|++||..-.
T Consensus 503 FGIA~aI~~D----TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~ 578 (677)
T KOG0596|consen 503 FGIANAIQPD----TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ 578 (677)
T ss_pred echhcccCcc----ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH
Confidence 9999988764 2355566678888999999986421111 1124568999999999999999999986432
Q ss_pred ---hhc---------cCCCCc--chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ---LRN---------TASIPK--SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ---l~~---------~~~iP~--~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.. ...+|. .+..+++.||..||++|+++.++|+|+
T Consensus 579 ~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhp 628 (677)
T KOG0596|consen 579 IAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHP 628 (677)
T ss_pred HHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence 111 123333 388999999999999999999999998
No 93
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.98 E-value=4.5e-32 Score=283.91 Aligned_cols=236 Identities=22% Similarity=0.333 Sum_probs=190.7
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++++.||.|+ | +||+++++.+++.|++|++..............+|++.++.++||||+++++.+..+
T Consensus 1 y~~~~~lg~G~~g--~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-------- 70 (260)
T PF00069_consen 1 YRLVKKLGSGGFG--TVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD-------- 70 (260)
T ss_dssp EEEEEEEEEESSE--EEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES--------
T ss_pred CEEeEEEEeCCCE--EEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc--------
Confidence 88999999998 8 999999999999999999998755544444456699999999999999999999874
Q ss_pred cEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+|||++ + +|.+++..... .....+..++.||+.||.+||+ .+++|+||||+||+++.+|.++|+|||++.
T Consensus 71 ~~~~~v~~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 71 NYLYIVMEYCPGGSLQDYLQKNKP---LSEEEILKIAYQILEALAYLHS-KGIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp SEEEEEEEEETTEBHHHHHHHHSS---BBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccccccccc---cccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 3899999999 3 79999984332 2344566779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN----- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~----- 248 (778)
....... ......+...|+|||+...+ ...+.++|+||||+++|+|++|..|+... ....
T Consensus 147 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~ 215 (260)
T PF00069_consen 147 KLSENNE------NFNPFVGTPEYMAPEVLQQG-----KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKIL 215 (260)
T ss_dssp ESTSTTS------EBSSSSSSGGGSCHHHHTTT-----SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHH
T ss_pred ccccccc------cccccccccccccccccccc-----ccccccccccccccccccccccccccccccchhhhhhhhhcc
Confidence 6422110 01122344589999998721 46778999999999999999999887643 1100
Q ss_pred -------c---CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------T---ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------~---~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+..+..++++||+.+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~ 258 (260)
T PF00069_consen 216 KRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHP 258 (260)
T ss_dssp HTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSG
T ss_pred cccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCC
Confidence 0 12236889999999999999999999999998
No 94
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.98 E-value=1.2e-31 Score=292.53 Aligned_cols=236 Identities=18% Similarity=0.219 Sum_probs=186.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCC-CeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHP-NILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHP-nIlk~~d~~e~e~~~g~ 96 (778)
+|++.+.||.|+ | .||+|+++.+++.|+||++.+... .+...+.+..|+++++.++|+ +|+++++++...
T Consensus 1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (324)
T cd05587 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----- 73 (324)
T ss_pred CceEEEEEeeccCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-----
Confidence 589999999998 8 999999999999999999986422 223455677899999999865 588888888763
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~E~~~~g~L~~~~~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 74 ---DRLYFVMEYVNGGDLMYHIQQVGKF---KEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 3899999999 5798888765432 234455668999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~ 214 (324)
T cd05587 147 MCKENIFGGK------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM 214 (324)
T ss_pred cceecCCCCC------ceeeecCCccccChhhhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875422110 0112234568999999876 35678999999999999999999998543211
Q ss_pred -c----cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 248 -N----TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 248 -~----~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
. ...++..+.+++++||..+|.+|++. .++++|+
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp 258 (324)
T cd05587 215 EHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHA 258 (324)
T ss_pred cCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 1 12356667889999999999999986 7899997
No 95
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.98 E-value=1.8e-31 Score=284.13 Aligned_cols=239 Identities=17% Similarity=0.239 Sum_probs=188.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||+|+++.+|+.|+||.+............+.+|++.+++++||||++++++++.+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 71 (284)
T cd07860 1 NFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE------- 71 (284)
T ss_pred CceeeeeecCCCce--EEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-------
Confidence 489999999987 7 999999999999999999876544444445788999999999999999999998763
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+||||+ ++|..++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lh~-~~i~H~~l~p~nill~~~~~~~l~dfg~~~ 148 (284)
T cd07860 72 -NKLYLVFEFLHQDLKKFMDASPLS-GIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLAR 148 (284)
T ss_pred -CcEEEEeeccccCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEeeccchh
Confidence 4899999999 5688877654322 22344466679999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ .........|+|||++.+. ..++.++|+|||||++|+|++|..+|......
T Consensus 149 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 217 (284)
T cd07860 149 AFGVPVRT------YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 217 (284)
T ss_pred hcccCccc------cccccccccccCCeEEecC-----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence 65432110 0111234579999987653 23567899999999999999999887432100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 282 (284)
T cd07860 218 GTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHP 282 (284)
T ss_pred CCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCC
Confidence 0123456677899999999999999999999998
No 96
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.98 E-value=9e-32 Score=293.04 Aligned_cols=231 Identities=16% Similarity=0.204 Sum_probs=182.7
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+.||.|+ | +||+|+++.+++.|+||++.+... .+.....+..|.++++.+ +||||++++++++.+ ..
T Consensus 1 ~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--------~~ 70 (321)
T cd05591 1 KVLGKGSFG--KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--------DR 70 (321)
T ss_pred CccccCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--------Ce
Confidence 3578887 8 999999999999999999986422 223445677888888866 799999999999864 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~E~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 71 LFFVMEYVNGGDLMFQIQRSRKF---DEPRSRFYAAEVTLALMFLHR-HGVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999 4788888765422 234456679999999999995 89999999999999999999999999998764
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c-------
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N------- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~------- 248 (778)
..... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 214 (321)
T cd05591 147 ILNGV------TTTTFCGTPDYIAPEILQE------LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL 214 (321)
T ss_pred ccCCc------cccccccCccccCHHHHcC------CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC
Confidence 33211 1112234568999999876 35678999999999999999999998643211 1
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCC-------ChHHHHhcc
Q 004025 249 -TASIPKSLLPDYQRLLSSMPSRRL-------NSSKLIENS 281 (778)
Q Consensus 249 -~~~iP~~L~~~i~~lL~~dP~~Rp-------s~~~lL~~~ 281 (778)
...++..+.+++++||..+|.+|+ ++.++++|+
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence 123567788999999999999999 889999998
No 97
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.2e-32 Score=275.28 Aligned_cols=241 Identities=17% Similarity=0.243 Sum_probs=199.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEec
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVE 91 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e 91 (778)
.|+-.+.+|.|. + +|.++.++.+|..+++|+++..... ...++..+.|+.+|+++. ||+|+++.|+|+++
T Consensus 18 ~y~pkeilgrgvss--~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 18 KYEPKEILGRGVSS--VVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred hcChHHHhcccchh--hhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 577778888886 4 7899999999999999999853221 244667789999999996 99999999999985
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
. .+++|+|.+ |.|.++|.+.-... +..-..++.|+++++.|||. .+||||||||+||+++++.++|
T Consensus 96 s--------F~FlVFdl~prGELFDyLts~VtlS---EK~tR~iMrqlfegVeylHa-~~IVHRDLKpENILlddn~~i~ 163 (411)
T KOG0599|consen 96 A--------FVFLVFDLMPRGELFDYLTSKVTLS---EKETRRIMRQLFEGVEYLHA-RNIVHRDLKPENILLDDNMNIK 163 (411)
T ss_pred c--------hhhhhhhhcccchHHHHhhhheeec---HHHHHHHHHHHHHHHHHHHH-hhhhhcccChhheeeccccceE
Confidence 4 899999999 68999998754332 22234559999999999995 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-h---
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-E--- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-~--- 245 (778)
|.|||+++.+..... -...++++.|.|||.++..|..-..+|+..+|+|++|++||.++.|-+||-.. +
T Consensus 164 isDFGFa~~l~~Gek-------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlM 236 (411)
T KOG0599|consen 164 ISDFGFACQLEPGEK-------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLM 236 (411)
T ss_pred EeccceeeccCCchh-------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHH
Confidence 999999998876321 22346677999999999888766678899999999999999999999987432 1
Q ss_pred hhc------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 LRN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 l~~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++. -..+.....+++.+||..||.+|+++.+.|.|+
T Consensus 237 LR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 237 LRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred HHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 111 135677889999999999999999999999998
No 98
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.98 E-value=4.6e-31 Score=276.33 Aligned_cols=239 Identities=21% Similarity=0.255 Sum_probs=191.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.+.+|.|+ | .||.++++.+++.|+||.+..........+.+.+|++.+++++||||+++++.+..+
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (257)
T cd08223 1 AYCFVRVVGKGSYG--EVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE------- 71 (257)
T ss_pred CceEEEEecCCCCe--EEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-------
Confidence 499999999998 7 899999999999999999986554444566789999999999999999999988643
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+|+++||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 ~~~~~lv~e~~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~l~~~l~~lH~-~~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 72 DGLLYIVMGFCEGGDLYHKLKEQKGK-LLPENQVVEWFVQIAMALQYLHE-KHILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred CCEEEEEecccCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCchhEEEecCCcEEEecccce
Confidence 23789999999 4798888764321 12344566779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....+...|+|||+..+ ..++.++|+|||||++|+|++|..+|.......
T Consensus 150 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd08223 150 RVLENQCDM------ASTLIGTPYYMSPELFSN------KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG 217 (257)
T ss_pred EEecccCCc------cccccCCcCccChhHhcC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc
Confidence 876432110 111233458999999876 356678999999999999999998875432111
Q ss_pred -c----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+++.+|++.+|..||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~ 255 (257)
T cd08223 218 KLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQP 255 (257)
T ss_pred CCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence 1 23556788999999999999999999999997
No 99
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=2.5e-31 Score=283.62 Aligned_cols=232 Identities=13% Similarity=0.164 Sum_probs=182.3
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
||.|+ | +||.+.++.+|+.|+||++.+..... ...+.+.+|+++|+.++||||+++++.++.+ ..+|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--------~~~~l 70 (280)
T cd05608 1 LGKGGFG--EVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK--------TDLCL 70 (280)
T ss_pred CCCCCce--eEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC--------CeEEE
Confidence 46676 7 99999999999999999997643222 2345678899999999999999999999864 38999
Q ss_pred EecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 105 VTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
||||+ ++|..++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++..+..
T Consensus 71 v~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 71 VMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred EEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 99999 578877754322 1222344456669999999999995 8999999999999999999999999999876644
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------h-hc-----
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------L-RN----- 248 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l-~~----- 248 (778)
.... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.... . ..
T Consensus 150 ~~~~------~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 217 (280)
T cd05608 150 GQSK------TKGYAGTPGFMAPELLQG------EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS 217 (280)
T ss_pred CCcc------ccccCCCcCccCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC
Confidence 2111 112234558999999876 356789999999999999999998885321 0 10
Q ss_pred ---cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 ---TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 ---~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...+|..+.+++.+||+.+|.+|+ +++++++|+
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~ 258 (280)
T cd05608 218 VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHP 258 (280)
T ss_pred CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcCh
Confidence 124667788999999999999999 778999998
No 100
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=9.3e-32 Score=309.46 Aligned_cols=253 Identities=15% Similarity=0.199 Sum_probs=195.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEee-eeEecccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLH-STEVENID 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d-~~e~e~~~ 94 (778)
...++|.+.|.+|+ + .||.++....|..||+|.+-.. ++..++.+++||.+||.|+ |||||.|+| ......++
T Consensus 36 ~~~v~V~~vLAEGGFa--~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFA--QVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred CEEEEEEEEEccCCcE--EEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 45677888888886 6 8999999988899999998865 5567889999999999998 999999999 44333222
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~KL 170 (778)
+ ....++|.|||| +.|-+++..+.-.. ..+..|..+++|+++|+.+||. ++ |||||||.+||||+.+|.|||
T Consensus 112 ~--~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 112 N--GVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred C--ceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEe
Confidence 1 135789999999 47999998654333 3345577889999999999996 76 999999999999999999999
Q ss_pred EecccccccCCCCCCCCC-Ccccc--ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-hh
Q 004025 171 HAFDVLSEFDGNNEAANG-PMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-EL 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~-~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-~l 246 (778)
||||-++..........+ .+... ....+..|++||++.-. . ....+.++|||+||||||-|+....||+.. .+
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly-s--g~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l 264 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY-S--GLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL 264 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh-c--CCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce
Confidence 999998765432211110 11111 11235699999997521 1 146788999999999999999999999876 44
Q ss_pred hcc---CCCC------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RNT---ASIP------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~~---~~iP------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+ +.|| ..+..+|+.||..||.+||++.+++...
T Consensus 265 aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 265 AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 332 4444 4689999999999999999999988753
No 101
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=1.4e-31 Score=297.79 Aligned_cols=244 Identities=14% Similarity=0.146 Sum_probs=190.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|++.+.||.|+ | +||.++++.+++.|++|++.+... .......+.+|+.+++.++||||+++++.++.+
T Consensus 40 ~~~~~y~i~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~-- 115 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFG--EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD-- 115 (371)
T ss_pred cchhhcEEEEEEeecCCe--EEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC--
Confidence 3456899999999998 8 899999999999999999975322 123345678899999999999999999999863
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.++|+||||| ++|..+++.... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 116 ------~~~~lv~Ey~~gg~L~~~~~~~~~----~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NIll~~~~~ikL~ 184 (371)
T cd05622 116 ------RYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLA 184 (371)
T ss_pred ------CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEECCCCCEEEE
Confidence 4899999999 579998876542 234456678999999999995 999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~ 247 (778)
|||++..+..... .......++..|+|||++.+.-. ...++.++|+|||||++|||++|..||..... .
T Consensus 185 DfG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~--~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~ 257 (371)
T cd05622 185 DFGTCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 257 (371)
T ss_pred eCCceeEcCcCCc-----ccccCcccCccccCHHHHhccCC--CccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999987654211 11112345668999999865210 12367899999999999999999999864321 1
Q ss_pred c------------cCCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 248 N------------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 248 ~------------~~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
. ...++..+..++.+||..++.+ |+++.++++|+
T Consensus 258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 258 KIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1 0235566788899999844443 78999999997
No 102
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=2.7e-31 Score=284.59 Aligned_cols=241 Identities=18% Similarity=0.265 Sum_probs=191.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|. | .||+|+++.+++.|+||.+......+.....+.+|+.++++++||||+++++++....
T Consensus 5 ~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----- 77 (293)
T cd07843 5 DEYEKLNRIEEGTYG--VVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN----- 77 (293)
T ss_pred hhhhhhhhhcCCCCe--EEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC-----
Confidence 3699999999998 7 8999999999999999999865444444456778999999999999999999987643
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 78 -~~~~~lv~e~~~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~~~~l~d~g~~ 153 (293)
T cd07843 78 -LDKIYMVMEYVEHDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHD-NWILHRDLKTSNLLLNNRGILKICDFGLA 153 (293)
T ss_pred -CCcEEEEehhcCcCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCCcEEEeecCce
Confidence 24899999999 568887766432 23345567779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
......... ......+..|+|||.+.+. ...+.++|+|||||++|+|++|.++|.....
T Consensus 154 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 222 (293)
T cd07843 154 REYGSPLKP------YTQLVVTLWYRAPELLLGA-----KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKL 222 (293)
T ss_pred eeccCCccc------cccccccccccCchhhcCC-----ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 877543110 1112334579999988653 2356789999999999999999987742110
Q ss_pred --------------------------------hccCC--CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------------------------------RNTAS--IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------------------------------~~~~~--iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..... +++.+.+++++||+.+|.+||++.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~ 291 (293)
T cd07843 223 LGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHP 291 (293)
T ss_pred hCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCC
Confidence 00011 366688899999999999999999999997
No 103
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=1.3e-31 Score=293.06 Aligned_cols=230 Identities=16% Similarity=0.197 Sum_probs=181.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||.|+++.+++.|+||++.+.... ......+.+|..+++.+ +||||++++++++++ ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--------~~~ 71 (329)
T cd05588 2 VIGRGSYA--KVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--------SRL 71 (329)
T ss_pred eEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--------CEE
Confidence 467787 7 9999999999999999999864322 23456688899999998 699999999999874 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||| ++|..++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~g~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 72 FFVIEFVSGGDLMFHMQRQRK---LPEEHARFYSAEISLALNFLHE-RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI 147 (329)
T ss_pred EEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEECcCccccccc
Confidence 9999999 478888765432 2344456679999999999995 999999999999999999999999999987532
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------------- 245 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--------------- 245 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05588 148 RPGD------TTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ 215 (329)
T ss_pred cCCC------ccccccCCccccCHHHHcC------CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH
Confidence 2111 0112345568999999876 356789999999999999999999885210
Q ss_pred --hhcc----CCCCcchHHHHHHHhccCCCCCCC------hHHHHhcc
Q 004025 246 --LRNT----ASIPKSLLPDYQRLLSSMPSRRLN------SSKLIENS 281 (778)
Q Consensus 246 --l~~~----~~iP~~L~~~i~~lL~~dP~~Rps------~~~lL~~~ 281 (778)
.... ..++..+.+++++||+.||.+|++ +.++++|+
T Consensus 216 ~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05588 216 VILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHP 263 (329)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCC
Confidence 0111 234456778999999999999997 68999998
No 104
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=3.8e-32 Score=295.47 Aligned_cols=231 Identities=15% Similarity=0.226 Sum_probs=181.8
Q ss_pred cCCCCCC-CceEEEEeEE---CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTS---KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~---k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.||.|+ | +||.+++ +.+|+.|+||++.+..........+.+|+++|++++||||+++++.++.+ .
T Consensus 2 ~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~ 71 (318)
T cd05582 2 KVLGQGSFG--KVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE--------G 71 (318)
T ss_pred ceeeeCCCE--EEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC--------C
Confidence 4678887 7 7887765 46789999999986433333345677899999999999999999999864 3
Q ss_pred EEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++..
T Consensus 72 ~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 72 KLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 899999999 578888865432 2344566679999999999995 9999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h----cc-
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----NT- 249 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----~~- 249 (778)
...... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||..... . ..
T Consensus 148 ~~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~ 215 (318)
T cd05582 148 SIDHEK------KAYSFCGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL 215 (318)
T ss_pred cCCCCC------ceecccCChhhcCHHHHcC------CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC
Confidence 543211 1122244568999999876 3567899999999999999999998864321 1 11
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 250 ---ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 250 ---~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
..++..+.+++++||+.||.+|++ +.++++|+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~ 255 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHP 255 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCC
Confidence 235667888999999999999999 67788887
No 105
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=3.8e-31 Score=282.88 Aligned_cols=239 Identities=17% Similarity=0.258 Sum_probs=187.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-..|++.+.+|.|. | +||+|+++.+++.|+||.+....... ....+.+|+++++.++||||++++++++++
T Consensus 4 ~~~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 75 (291)
T cd07844 4 LETYKKLDKLGEGSYA--TVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTK----- 75 (291)
T ss_pred ccceeEEEEEeecCCe--EEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecC-----
Confidence 35799999999998 8 89999999999999999997643222 223466899999999999999999999863
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.+.|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 76 ---~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~ 149 (291)
T cd07844 76 ---KTLTLVFEYLDTDLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQ-RRVLHRDLKPQNLLISERGELKLADFGL 149 (291)
T ss_pred ---CeEEEEEecCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCHHHEEEcCCCCEEECcccc
Confidence 4899999999 578888876432 22344567779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----hh---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR--- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l~--- 247 (778)
+.......... .....+..|+|||++.+. ..++.++|+|||||++|+|++|..+|.... +.
T Consensus 150 ~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~ 218 (291)
T cd07844 150 ARAKSVPSKTY------SNEVVTLWYRPPDVLLGS-----TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIF 218 (291)
T ss_pred ccccCCCCccc------cccccccccCCcHHhhcC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence 87653221100 111234579999987653 245678999999999999999998874321 00
Q ss_pred -----------------------------------ccCCCC--cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------------------NTASIP--KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------------------~~~~iP--~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+. ..+.+++.+||+.+|.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~ 289 (291)
T cd07844 219 RVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP 289 (291)
T ss_pred HhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCC
Confidence 001222 5567889999999999999999999997
No 106
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=5.6e-31 Score=276.75 Aligned_cols=243 Identities=16% Similarity=0.226 Sum_probs=194.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++++.+|.|+ | +||+|..+.++..|+||++....... ....+.+|++.|+.++||||+++++.++.+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (267)
T cd06610 2 DYELIEVIGVGATA--VVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVG------- 71 (267)
T ss_pred cceeeeeecCCCCe--EEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeC-------
Confidence 699999999998 7 99999999999999999997654333 567789999999999999999999998764
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|||++ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 72 -~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~-~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 72 -DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS-NGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred -CEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 4899999999 4799998765332223344566679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------c
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~ 248 (778)
..+........ .......+...|++||++... ..++.++|+|||||++|+|++|..||...... .
T Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~-----~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 222 (267)
T cd06610 150 ASLADGGDRTR--KVRKTFVGTPCWMAPEVMEQV-----HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN 222 (267)
T ss_pred HHhccCccccc--cccccccCChhhcChHHHccc-----cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC
Confidence 87765322110 011122344589999998753 35678999999999999999999887532110 0
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||..||++.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p 265 (267)
T cd06610 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHK 265 (267)
T ss_pred CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCC
Confidence 024566788999999999999999999999998
No 107
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=1.6e-31 Score=306.22 Aligned_cols=241 Identities=16% Similarity=0.226 Sum_probs=183.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC------CCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH------PNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH------PnIlk~~d~~e~ 90 (778)
..+|++.+.||.|+ | +||+|+++.+++.||||++.... .....++.|+.+++.++| ++|+++++++..
T Consensus 128 ~~~y~i~~~lG~G~fg--~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 128 TQRFKILSLLGEGTFG--KVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCcEEEEEEEEeccCE--EEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 35799999999998 8 99999999999999999996421 223345667777777655 458899998875
Q ss_pred cccccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC---
Q 004025 91 ENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL--- 166 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g--- 166 (778)
+ ..++|||||+++ .|.+++...+. .....+..++.||+.||.|||.+++||||||||+||+++.+|
T Consensus 203 ~-------~~~~~iv~~~~g~~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 203 E-------TGHMCIVMPKYGPCLLDWIMKHGP---FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred C-------CceEEEEEeccCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccc
Confidence 4 248999999995 58888876532 233446667999999999999646999999999999998766
Q ss_pred -------------cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 167 -------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 167 -------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
.+||+|||.+...... .....++..|+|||++.+ ..++.++|+|||||++||
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~~---------~~~~~gt~~Y~APE~~~~------~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDERHS---------RTAIVSTRHYRSPEVVLG------LGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCccc---------cccccCCccccCcHHhhc------CCCCcHHHHHHHHHHHHH
Confidence 4999999987543221 112245568999999876 357789999999999999
Q ss_pred HHhCCCCCChhhh----h----ccCCCC----------------------------------------------cchHHH
Q 004025 234 LFSGMRLSKTEEL----R----NTASIP----------------------------------------------KSLLPD 259 (778)
Q Consensus 234 l~tg~~p~~~~~l----~----~~~~iP----------------------------------------------~~L~~~ 259 (778)
|++|++||..... . ....+| ..+.++
T Consensus 338 lltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 417 (467)
T PTZ00284 338 LYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDL 417 (467)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHH
Confidence 9999999853210 0 001111 124578
Q ss_pred HHHHhccCCCCCCChHHHHhcccCCcccccccc
Q 004025 260 YQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQ 292 (778)
Q Consensus 260 i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~ 292 (778)
+.+||..||++|+++.++|+|+ |+..||.
T Consensus 418 i~~mL~~dP~~R~ta~e~L~Hp----~~~~~~~ 446 (467)
T PTZ00284 418 IYGLLHYDRQKRLNARQMTTHP----YVLKYYP 446 (467)
T ss_pred HHHhCCcChhhCCCHHHHhcCc----cccccCC
Confidence 9999999999999999999999 6665554
No 108
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.5e-32 Score=290.37 Aligned_cols=242 Identities=19% Similarity=0.255 Sum_probs=198.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
=|++.+.||.|- . +|-.+++--+|+.||||++++...++.....+..|++.||.++||||+++|+++.+
T Consensus 19 LYDLekTlG~GHFA--VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT-------- 88 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFA--VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT-------- 88 (864)
T ss_pred eehhhhhhcCCcee--hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc--------
Confidence 399999999986 5 78889999999999999999987777666778899999999999999999999987
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeE-EcCCCcEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV-VTQTLDWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~-v~~~g~~KL~dFgl 175 (778)
+..+|+|.|.- ++|++||-+.... ..++.-+.++.||+.|+.|+|+ ..+|||||||+||+ +..-|-+||.|||+
T Consensus 89 QTKlyLiLELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHq-LHVVHRDLKPENVVFFEKlGlVKLTDFGF 165 (864)
T KOG4717|consen 89 QTKLYLILELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQ-LHVVHRDLKPENVVFFEKLGLVKLTDFGF 165 (864)
T ss_pred cceEEEEEEecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhh-hhhhcccCCcceeEEeeecCceEeeeccc
Confidence 45999999997 6899999765421 2344455669999999999995 99999999999985 56789999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~--- 248 (778)
+..+..... -..+++...|.|||++.++ .+...++||||||+++|.|.+|++||+.. .+..
T Consensus 166 SNkf~PG~k-------L~TsCGSLAYSAPEILLGD-----sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImD 233 (864)
T KOG4717|consen 166 SNKFQPGKK-------LTTSCGSLAYSAPEILLGD-----SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMD 233 (864)
T ss_pred cccCCCcch-------hhcccchhhccCchhhhcC-----ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhc
Confidence 887765321 1223556699999999986 45567999999999999999999999632 2221
Q ss_pred -cCCCC----cchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 249 -TASIP----KSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 249 -~~~iP----~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
-+.+| +..++++.+||..+|++|.+.+++..++ |++.-
T Consensus 234 CKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~----Wlq~~ 276 (864)
T KOG4717|consen 234 CKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTS----WLQAG 276 (864)
T ss_pred ccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccc----cccCC
Confidence 14455 4567889999999999999999999998 87643
No 109
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=3.1e-31 Score=282.88 Aligned_cols=243 Identities=17% Similarity=0.186 Sum_probs=191.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | +||+++++.+|..|++|.+.... .+.....+.+|+..+++++||||+++++.+..+
T Consensus 2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (286)
T cd06622 2 EIEVLDELGKGNYG--SVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIE------- 71 (286)
T ss_pred hhhhhhhhcccCCe--EEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-------
Confidence 589999999998 8 99999999999999999987542 333456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|..++.............+.+++.||+.||.|||+.++++|+||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 72 -GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred -CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 3899999999 4688888764222223455677889999999999996579999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------hc-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------RN- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~~- 248 (778)
..+..... ....+...|++||++.+.-......++.++|+|||||++|+|++|..||..... ..
T Consensus 151 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 222 (286)
T cd06622 151 GNLVASLA--------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI 222 (286)
T ss_pred ccccCCcc--------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH
Confidence 76643210 111234479999998653222223457789999999999999999988753211 10
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+..++.+||..+|..||++.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP 263 (286)
T ss_pred hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence 123456678889999999999999999999998
No 110
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=1.5e-31 Score=292.58 Aligned_cols=230 Identities=14% Similarity=0.191 Sum_probs=180.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.+.... ......+.+|+.++..+ +||||++++++++.+ ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--------~~~ 71 (329)
T cd05618 2 VIGRGSYA--KVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--------SRL 71 (329)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--------CEE
Confidence 578887 7 9999999999999999999865322 23456678899888776 799999999999874 389
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~E~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 72 FFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 147 (329)
T ss_pred EEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCCCEEEeeCCcccccc
Confidence 9999999 578887765432 2344566679999999999995 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh------------h---
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE------------E--- 245 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~------------~--- 245 (778)
..... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||... .
T Consensus 148 ~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05618 148 RPGDT------TSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 215 (329)
T ss_pred CCCCc------cccccCCccccCHHHHcC------CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHH
Confidence 21110 112244568999999876 35677999999999999999999888410 0
Q ss_pred --hhccCC----CCcchHHHHHHHhccCCCCCCC------hHHHHhcc
Q 004025 246 --LRNTAS----IPKSLLPDYQRLLSSMPSRRLN------SSKLIENS 281 (778)
Q Consensus 246 --l~~~~~----iP~~L~~~i~~lL~~dP~~Rps------~~~lL~~~ 281 (778)
+..... ++..+.+++++||+.||.+|++ +.++++|+
T Consensus 216 ~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05618 216 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 263 (329)
T ss_pred HHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCC
Confidence 011123 3445678899999999999998 47999997
No 111
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=3.5e-31 Score=284.13 Aligned_cols=238 Identities=20% Similarity=0.290 Sum_probs=188.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+|++.+.||.|. | .||+|.++.+|+.|+||.+...... ......+.+|+++++.++||||+++++++..+
T Consensus 1 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 74 (298)
T cd07841 1 RYEKGKKLGEGTYA--VVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK---- 74 (298)
T ss_pred Cceeeeeeeecccc--EEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC----
Confidence 489999999987 7 9999999999999999999865433 23445677899999999999999999999873
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|..++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 75 ----~~~~lv~e~~~~~L~~~i~~~~~--~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nill~~~~~~~l~dfg 147 (298)
T cd07841 75 ----SNINLVFEFMETDLEKVIKDKSI--VLTPADIKSYMLMTLRGLEYLHS-NWILHRDLKPNNLLIASDGVLKLADFG 147 (298)
T ss_pred ----CEEEEEEcccCCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCChhhEEEcCCCCEEEccce
Confidence 3899999999 568888876541 12344456669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++.......... ........|+|||.+.+. ..++.++|+|||||++|||++|.++|.....
T Consensus 148 ~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~ 216 (298)
T cd07841 148 LARSFGSPNRKM------THQVVTRWYRAPELLFGA-----RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIF 216 (298)
T ss_pred eeeeccCCCccc------cccccceeeeCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHH
Confidence 998765432111 111234479999987542 3456789999999999999999776642110
Q ss_pred h--------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R--------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~--------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....++..+.+++.+||..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~ 283 (298)
T cd07841 217 EALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHP 283 (298)
T ss_pred HHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCc
Confidence 0 0023455677889999999999999999999997
No 112
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=3.6e-31 Score=286.19 Aligned_cols=243 Identities=17% Similarity=0.244 Sum_probs=190.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|. | .||+|+++.+|+.|+||++..+...+.......+|+.++++++||||+++++++..+.
T Consensus 5 ~~~~y~~~~~ig~g~~~--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (309)
T cd07845 5 SVTEFEKLNRIGEGTYG--IVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH--- 79 (309)
T ss_pred cccceeEeeeeeecCCE--EEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---
Confidence 345799999999997 7 9999999999999999999865433333334668999999999999999999997543
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 80 ---~~~~~lv~e~~~~~l~~~l~~~~~--~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 80 ---LDSIFLVMEYCEQDLASLLDNMPT--PFSESQVKCLMLQLLRGLQYLHE-NFIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred ---CCeEEEEEecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECccc
Confidence 23789999999 578887765431 12334456679999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~--- 247 (778)
++......... .........|+|||++.+. ..++.++|+|||||++|||++|.++|..... .
T Consensus 154 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~ 222 (309)
T cd07845 154 LARTYGLPAKP------MTPKVVTLWYRAPELLLGC-----TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLII 222 (309)
T ss_pred eeeecCCccCC------CCcccccccccChhhhcCC-----CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99876542110 0111234579999998653 3467799999999999999999988742210 0
Q ss_pred c-----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ...+++.+.+++++||..||.+||++.+++.|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 223 QLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred HhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 0 011355677899999999999999999999998
No 113
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=4.8e-31 Score=278.06 Aligned_cols=242 Identities=17% Similarity=0.262 Sum_probs=189.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-------GHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
+|.++..+|.|. | .||.|.++.+++.|++|.+....... ...+.+++|+.++++++||||+++++.+..+
T Consensus 1 ~~~~~~~ig~g~~~--~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (267)
T cd06628 1 KWIKGALIGSGSFG--SVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA 78 (267)
T ss_pred CccccceeecCCCe--EEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Confidence 488899999987 6 99999999999999999987643221 2346788999999999999999999998864
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
.+.|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||+|+||+++.++.+|
T Consensus 79 --------~~~~lv~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~~l~~~l~~lH~-~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 79 --------DHLNIFLEYVPGGSVAALLNNYGAF---EETLVRNFVRQILKGLNYLHN-RGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred --------CccEEEEEecCCCCHHHHHHhccCc---cHHHHHHHHHHHHHHHHHHHh-cCcccccCCHHHEEEcCCCCEE
Confidence 3889999999 4798888765422 233455669999999999995 9999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~---- 245 (778)
|+|||++....................+...|+|||.+.+. .++.++|+|||||++|+|++|..||....
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 220 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT------SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA 220 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccC------CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH
Confidence 99999988775322111101001112334589999998763 45678999999999999999998875321
Q ss_pred hh---c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 LR---N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 l~---~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ...+|..+.+++++||+.+|.+||++.++++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 265 (267)
T cd06628 221 IFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHP 265 (267)
T ss_pred HHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCC
Confidence 10 0 124567788999999999999999999999997
No 114
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=5.4e-31 Score=285.10 Aligned_cols=234 Identities=15% Similarity=0.163 Sum_probs=188.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | .||++.++.++..|++|.+.... .......+.+|+++++.++||||+++++.+..+
T Consensus 2 ~~~~~~~lg~G~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 71 (308)
T cd06615 2 DFEKLGELGAGNGG--VVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD------- 71 (308)
T ss_pred CceEEeeccCCCCe--EEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-------
Confidence 599999999998 8 89999999999999999987542 233456688999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.++++.... .....+..++.||+.||.|||+.++++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~ey~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 72 -GEISICMEHMDGGSLDQVLKKAGR---IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred -CEEEEEeeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 3899999999 479999876532 2344566779999999999996568999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------- 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~------- 249 (778)
....... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|..||........
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 213 (308)
T cd06615 148 GQLIDSM--------ANSFVGTRSYMSPERLQG------THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRP 213 (308)
T ss_pred ccccccc--------cccCCCCcCccChhHhcC------CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCc
Confidence 7653321 111234558999999765 3466789999999999999999988642111000
Q ss_pred -------------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 -------------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 -------------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+||..+|.+||++.++++|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 214 VSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 01344578889999999999999999999998
No 115
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=1.7e-31 Score=290.56 Aligned_cols=230 Identities=16% Similarity=0.200 Sum_probs=183.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.+... .......+.+|.++++.+ +||||++++++++.. .++
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--------~~~ 71 (318)
T cd05570 2 VLGKGSFG--KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--------DRL 71 (318)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--------CEE
Confidence 578887 8 899999999999999999986422 123355677888889888 699999999999863 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 72 FFVMEYVNGGDLMFHIQRSGR---FDEPRARFYAAEIVLGLQFLHE-RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGI 147 (318)
T ss_pred EEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEccCCCHHHeEECCCCcEEecccCCCeecC
Confidence 9999999 578888876532 2344466679999999999995 999999999999999999999999999987532
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 148 ~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~ 215 (318)
T cd05570 148 LGGV------TTSTFCGTPDYIAPEILSY------QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRY 215 (318)
T ss_pred cCCC------cccceecCccccCHHHhcC------CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 2111 1112234568999999876 356789999999999999999999986432111
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
...++..+.+++++||..+|.+||++ .++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~ 253 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHP 253 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCC
Confidence 12466778899999999999999999 9999997
No 116
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=4e-31 Score=281.25 Aligned_cols=237 Identities=20% Similarity=0.276 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|. | .||+|+++.+|+.|+||++..........+.+.+|++++++++||||+++++.++..
T Consensus 2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------- 72 (286)
T cd07847 2 KYEKLSKIGEGSYG--VVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK------- 72 (286)
T ss_pred ceeeeeeecccCCe--EEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC-------
Confidence 699999999998 7 899999999999999999876543333445678999999999999999999999863
Q ss_pred ccEEEEEecCCc-C-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPVM-P-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v~-~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+. . |..++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (286)
T cd07847 73 -RKLHLVFEYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHK-HNCIHRDVKPENILITKQGQIKLCDFGFA 147 (286)
T ss_pred -CEEEEEEeccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHH-CCceecCCChhhEEEcCCCcEEECccccc
Confidence 48999999993 3 444443322 12344566779999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
......... .........|++||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 148 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (286)
T cd07847 148 RILTGPGDD------YTDYVATRWYRAPELLVGD-----TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT 216 (286)
T ss_pred eecCCCccc------ccCcccccccCCHHHHhCC-----CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 877543210 1112334579999997653 3456789999999999999999988753210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.+++.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~ 284 (286)
T cd07847 217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP 284 (286)
T ss_pred hCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence 0123566688999999999999999999999997
No 117
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=3.2e-31 Score=290.44 Aligned_cols=252 Identities=19% Similarity=0.303 Sum_probs=194.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | .||.|+++.+|+.|+||++..... ......+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~y~i~~~lg~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-- 79 (336)
T cd07849 5 PRYQNLSYIGEGAYG--MVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFES-- 79 (336)
T ss_pred cceEEEEEEEecCCe--EEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccc--
Confidence 4799999999998 8 899999999999999999864322 234556778999999999999999999876533111
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+|+|+||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 80 -~~~~~lv~e~~~~~l~~~~~~~~----l~~~~~~~i~~ql~~aL~~LH~-~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 80 -FNDVYIVQELMETDLYKLIKTQH----LSNDHIQYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred -cceEEEEehhcccCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCCCEEECcccce
Confidence 24789999999 56777776543 2344567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
........... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 154 ~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~ 225 (336)
T cd07849 154 RIADPEHDHTG---FLTEYVATRWYRAPEIMLNS-----KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGV 225 (336)
T ss_pred eeccccccccC---CcCCcCcCCCccChHHhhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 76644221110 11122345689999987542 3467789999999999999999988743210
Q ss_pred ---------h------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 247 ---------R------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 247 ---------~------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
. ....++..+.+++.+||+.+|.+||++.++++|+ |+..++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp----~~~~~~~~ 301 (336)
T cd07849 226 LGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHP----YLEQYHDP 301 (336)
T ss_pred cCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCc----cccccCCC
Confidence 0 0123456688899999999999999999999998 66666543
No 118
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=3.8e-31 Score=282.95 Aligned_cols=237 Identities=16% Similarity=0.197 Sum_probs=189.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||++.+..+++.|+||++....... .....+.+|+.+++.++||||+++++.++..
T Consensus 1 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 72 (285)
T cd05605 1 TFRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK------ 72 (285)
T ss_pred CceEEEEEecCCCe--EEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC------
Confidence 488999999998 8 99999999999999999997643222 2344577899999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|..++...... ......+..++.||+.||.|||+ .+++||||||+||++++++.++|+|||+
T Consensus 73 --~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 73 --DALCLVLTLMNGGDLKFHIYNMGNP-GFDEERAVFYAAEITCGLEDLHR-ERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred --CeEEEEEeccCCCcHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 4899999999 4788777654321 12344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------h-
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~- 247 (778)
+........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||..... .
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~ 215 (285)
T cd05605 149 AVEIPEGET-------IRGRVGTVGYMAPEVVKN------ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER 215 (285)
T ss_pred ceecCCCCc-------cccccCCCCccCcHHhcC------CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH
Confidence 876543211 011234568999999875 3567789999999999999999999864211 0
Q ss_pred ---c-----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 ---N-----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 ---~-----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. ...++..+.+++.+||..||.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05605 216 RVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHP 262 (285)
T ss_pred HhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCc
Confidence 0 124667788999999999999999 899999997
No 119
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=7.1e-31 Score=276.99 Aligned_cols=240 Identities=15% Similarity=0.181 Sum_probs=189.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | .||+|+++.+++.|+||++..+... ....+++|+..+++++||||+++++.+..+
T Consensus 7 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~---- 78 (267)
T cd06646 7 PQHDYELIQRVGSGTYG--DVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECKHCNIVAYFGSYLSR---- 78 (267)
T ss_pred chhhcchhheeecCCCe--EEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcCCCCeeeeeEEEEeC----
Confidence 456799999999998 8 8999999999999999999754322 345688999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++..... .....+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 79 ----~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nill~~~~~~~l~df 150 (267)
T cd06646 79 ----EKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLAYLHS-KGKMHRDIKGANILLTDNGDVKLADF 150 (267)
T ss_pred ----CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCCEEECcC
Confidence 3899999999 479888865432 2344567779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-hh-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LR----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-l~----- 247 (778)
|++..+...... .....+...|+|||.+.... ...++.++|+|||||++|||++|+.|+.... ..
T Consensus 151 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~---~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~ 221 (267)
T cd06646 151 GVAAKITATIAK------RKSFIGTPYWMAPEVAAVEK---NGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM 221 (267)
T ss_pred ccceeecccccc------cCccccCccccCHhHccccc---CCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee
Confidence 999876432110 11123345899999875311 1245678999999999999999988763211 00
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..+|.+||+++++++|.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 222 SKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0123466788999999999999999999999885
No 120
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=1.1e-31 Score=297.25 Aligned_cols=241 Identities=14% Similarity=0.164 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.++++.+++.|+||++..... .......+++|+++++.++||||+++++.++++
T Consensus 2 ~f~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~------ 73 (360)
T cd05627 2 DFESLKVIGRGAFG--EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK------ 73 (360)
T ss_pred CceEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 589999999998 8 999999999999999999975322 223456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| ++|.+++.+.... ....++.++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~l---~~~~~~~~~~qi~~~L~~lH~-~givHrDLkp~NIli~~~~~vkL~DfG~ 147 (360)
T cd05627 74 --RNLYLIMEFLPGGDMMTLLMKKDTL---SEEATQFYIAETVLAIDAIHQ-LGFIHRDIKPDNLLLDAKGHVKLSDFGL 147 (360)
T ss_pred --CEEEEEEeCCCCccHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCCCEEEeeccC
Confidence 4899999999 5799988765432 234456669999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------------------------CCccccccccCCCCCCccccccccccccCCCCCcchhHH
Q 004025 176 LSEFDGNNEAAN-----------------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (778)
Q Consensus 176 a~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwS 226 (778)
+..+........ .....+...++..|+|||++.+ ..++.++|+||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~------~~~~~~~DiwS 221 (360)
T cd05627 148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ------TGYNKLCDWWS 221 (360)
T ss_pred CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC------CCCCCcceecc
Confidence 875532110000 0000112345568999999876 46778999999
Q ss_pred HHHHHHHHHhCCCCCChhhhh-------c---c------CCCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 227 LGCLIYELFSGMRLSKTEELR-------N---T------ASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 227 LG~liyel~tg~~p~~~~~l~-------~---~------~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
|||++|||++|.+||...... . . ..++..+.+++.+|+. +|..|++ +.++++|+
T Consensus 222 lGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp 294 (360)
T cd05627 222 LGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHP 294 (360)
T ss_pred ccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCC
Confidence 999999999999998543211 0 1 1244567778888774 9999984 78999998
No 121
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=9.6e-31 Score=274.03 Aligned_cols=241 Identities=20% Similarity=0.228 Sum_probs=194.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||++.++.+|..|++|.+..+.......+.+.+|++++++++||||+++++.+....
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 72 (265)
T cd08217 1 DYEVLETIGKGSFG--TVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS------ 72 (265)
T ss_pred CceeeeeeccCCCe--EEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC------
Confidence 589999999987 7 9999999999999999999876555555677889999999999999999999886543
Q ss_pred ccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHH-----cCCCccccccCCCCeEEcCCCcEEE
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLN-----NDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH-----~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+|++|||+ ++|.+++..... ........+..++.||+.||.||| + .+++|+||+|+||+++.+|.+||
T Consensus 73 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~-~~i~h~dl~p~nili~~~~~~kl 151 (265)
T cd08217 73 NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG-NTVLHRDLKPANIFLDANNNVKL 151 (265)
T ss_pred CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc-CcceecCCCHHHEEEecCCCEEE
Confidence 34789999999 479998876422 122234456667999999999999 5 78999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-- 248 (778)
+|||++......... .....+...|+|||++.+. ..+.++|+||||+++|+|++|..|+.......
T Consensus 152 ~d~g~~~~~~~~~~~------~~~~~~~~~~~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 219 (265)
T cd08217 152 GDFGLAKILGHDSSF------AKTYVGTPYYMSPEQLNHM------SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA 219 (265)
T ss_pred ecccccccccCCccc------ccccccCCCccChhhhcCC------CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH
Confidence 999999877543210 1112345589999998763 46678999999999999999998876432111
Q ss_pred -----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~ 263 (265)
T cd08217 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263 (265)
T ss_pred HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCC
Confidence 124556788999999999999999999999997
No 122
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.97 E-value=7e-32 Score=293.17 Aligned_cols=227 Identities=17% Similarity=0.267 Sum_probs=185.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
-+|+|. | .||.|+.+ ++.||||++.. +-..+|+-|++|+|||||+|.+++... ..+||
T Consensus 131 WlGSGaQG--AVF~Grl~--netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCtqs--------PcyCI 189 (904)
T KOG4721|consen 131 WLGSGAQG--AVFLGRLH--NETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCTQS--------PCYCI 189 (904)
T ss_pred hhccCccc--ceeeeecc--CceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeecCC--------ceeEE
Confidence 368888 8 89999986 89999998752 234578999999999999999999753 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||| +.|..+|+..... .....+.| -.+|+.|+.|||. .+|||||||.-||+|+.+..+||+|||-++...+-
T Consensus 190 iMEfCa~GqL~~VLka~~~i--tp~llv~W-sk~IA~GM~YLH~-hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKAGRPI--TPSLLVDW-SKGIAGGMNYLHL-HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred eeeccccccHHHHHhccCcc--CHHHHHHH-HHHhhhhhHHHHH-hhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 99999 7899999876532 12233444 8999999999995 89999999999999999999999999999887652
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------------hc
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------------RN 248 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------------~~ 248 (778)
-....+.++..|||||++++ .....++||||||+++|||++|..||..-+- ..
T Consensus 266 -------STkMSFaGTVaWMAPEvIrn------ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv 332 (904)
T KOG4721|consen 266 -------STKMSFAGTVAWMAPEVIRN------EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV 332 (904)
T ss_pred -------hhhhhhhhhHhhhCHHHhhc------CCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC
Confidence 12345566679999999998 5778899999999999999999988854221 11
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhh
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVD 297 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~ 297 (778)
...+|+.+.=+++.||+..|..||++.+++.|- ..|.-.+..
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl-------dIa~pell~ 374 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL-------DIASPELLS 374 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHH-------hhcCHHHhc
Confidence 246788899999999999999999999999996 556554443
No 123
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=4e-31 Score=291.79 Aligned_cols=248 Identities=17% Similarity=0.252 Sum_probs=194.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||.|+++.+|+.|+||.+.+..........+.+|+.++++++||||+++++++...... .
T Consensus 16 ~~y~~~~~lg~g~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 91 (353)
T cd07850 16 KRYQNLKPIGSGAQG--IVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSL--E 91 (353)
T ss_pred cceEEEEEeccCCCE--EEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCc--c
Confidence 4699999999998 8 899999999999999999876544444456677899999999999999999998643210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.....|+||||+ ++|.+.+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 92 ~~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 92 EFQDVYLVMELMDANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred ccCcEEEEEeccCCCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 024689999999 5687777543 2234466679999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------h-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------R- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------~- 247 (778)
....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|+.+|...+. .
T Consensus 166 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 232 (353)
T cd07850 166 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQ 232 (353)
T ss_pred eeCCCCC-------CCCCCcccccccCHHHHhC------CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 8764321 1112234558999999876 3567899999999999999999987742210 0
Q ss_pred --------------------------------c--------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------N--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~--------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+..+.+++.+||..||.+||++.++|+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 233 LGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred cCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 0 001234467899999999999999999999999
Q ss_pred cCCccccccccc
Q 004025 282 VGDFWMTEYFQN 293 (778)
Q Consensus 282 ~~~~w~~~ff~n 293 (778)
|+..||..
T Consensus 313 ----~~~~~~~~ 320 (353)
T cd07850 313 ----YINVWYDP 320 (353)
T ss_pred ----hHhhccCC
Confidence 87777764
No 124
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=8.4e-31 Score=278.62 Aligned_cols=242 Identities=16% Similarity=0.162 Sum_probs=186.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHH-HHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|+ | .||+|+++.+|+.|+||.+......+...+ +..|+. .++.+.||||+++++.++.+
T Consensus 2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~iv~~~~~~~~~------ 72 (283)
T cd06617 2 DLEVIEELGRGAYG--VVDKMRHVPTGTIMAVKRIRATVNSQEQKR-LLMDLDISMRSVDCPYTVTFYGALFRE------ 72 (283)
T ss_pred CceEEEEecccCCe--EEEEEEEcCCCcEEEEEEEecCCCcHHHHH-HHHHHHHHHHHcCCCCeeeeeEEEecC------
Confidence 699999999998 8 899999999999999999987544333333 444555 46778899999999999864
Q ss_pred cccEEEEEecCC-cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ +.|..++..... ........+..++.||+.||.|||+.++++||||||+||+++.++.+||+|||+
T Consensus 73 --~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 73 --GDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred --CcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 3799999999 578887765322 222334456677999999999999645999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-----hhhhc--
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-----EELRN-- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-----~~l~~-- 248 (778)
+....... ......+...|+|||++.+... ...++.++|+|||||++|+|++|..||.. +.+..
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 221 (283)
T cd06617 151 SGYLVDSV-------AKTIDAGCKPYMAPERINPELN--QKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV 221 (283)
T ss_pred cccccccc-------ccccccCCccccChhhcCCccc--ccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH
Confidence 87664321 0111234457999998865211 13456789999999999999999988753 11111
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..+|..||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 262 (283)
T cd06617 222 EEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHP 262 (283)
T ss_pred hcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 124667789999999999999999999999997
No 125
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.5e-31 Score=296.22 Aligned_cols=240 Identities=21% Similarity=0.281 Sum_probs=204.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.+.+.||.|. + +|..|++..++..||||.+++...+...+..+.+|+++|+.|+||||++++.+++++
T Consensus 56 g~y~i~~tig~g~f~--~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~------ 127 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFA--KVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE------ 127 (596)
T ss_pred cceeeeeeeccceeE--EEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec------
Confidence 3699999999998 7 999999999999999999999877776667789999999999999999999999984
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ +.+.++|.+.+..... .....+.|+++|++|||. .+|||||||.+||+++.+.++||+|||+
T Consensus 128 --~~lylV~eya~~ge~~~yl~~~gr~~e~---~ar~~F~q~vsaveYcH~-k~ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 128 --ATLYLVMEYASGGELFDYLVKHGRMKEK---EARAKFRQIVSAVEYCHS-KNIVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred --ceeEEEEEeccCchhHHHHHhcccchhh---hhhhhhHHHHHHHHHHhh-cceeccccchhhcccccccceeeecccc
Confidence 4999999999 5799999988754432 233448999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------ 249 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~------ 249 (778)
+..+.... + ...+++.+.|.|||++.+. ......+|+|+||+++|.|+.|..||+...+..+
T Consensus 202 S~~~~~~~------~-lqt~cgsppyAaPEl~~g~-----~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~ 269 (596)
T KOG0586|consen 202 STFFDYGL------M-LQTFCGSPPYAAPELFNGK-----KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR 269 (596)
T ss_pred ceeecccc------c-ccccCCCCCccChHhhcCc-----ccCCcceehhhhhhhheeeeecccccCCcccccccchhee
Confidence 99887421 1 2345777899999999874 4667899999999999999999999987665443
Q ss_pred --CCCCc----chHHHHHHHhccCCCCCCChHHHHhcccCCcccc
Q 004025 250 --ASIPK----SLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMT 288 (778)
Q Consensus 250 --~~iP~----~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~ 288 (778)
..||- ....+++++|-.+|.+|++.++++.+. |+.
T Consensus 270 gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~----W~n 310 (596)
T KOG0586|consen 270 GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR----WRN 310 (596)
T ss_pred eeecccceeechhHHHHHHhhccCccccCCHHHhhhhc----ccc
Confidence 45554 456678888889999999999999997 664
No 126
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=6.9e-31 Score=284.38 Aligned_cols=237 Identities=18% Similarity=0.248 Sum_probs=177.7
Q ss_pred ccCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 24 GDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.+||.|+ | +||+|+++. ++..|++|.+..... ...+.+|+++|+.++||||+++++++.... ..
T Consensus 6 g~~lG~G~~g--~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 73 (317)
T cd07867 6 GCKVGRGTYG--HVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHS------DR 73 (317)
T ss_pred ceEeccCCCe--eEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccC------CC
Confidence 35789988 8 999999764 568899999875422 234678999999999999999999987543 34
Q ss_pred EEEEEecCC-cChHHHHHHhCc------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE----cCCCcEE
Q 004025 101 TIYIVTEPV-MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQTLDWK 169 (778)
Q Consensus 101 ~lyIVtE~v-~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v----~~~g~~K 169 (778)
.+|+|+||+ ++|..++..... ........+..++.||+.||.|||+ .+++||||||+||++ +.+|.+|
T Consensus 74 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~~k 152 (317)
T cd07867 74 KVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVK 152 (317)
T ss_pred eEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEccCCCCCCcEE
Confidence 899999999 568777754321 1112344566779999999999995 899999999999999 5678999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--- 246 (778)
|+|||+++.......... ......++..|+|||++.+. ..++.++|+|||||++|||++|.++|.....
T Consensus 153 l~DfG~a~~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~ 224 (317)
T cd07867 153 IADMGFARLFNSPLKPLA---DLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 224 (317)
T ss_pred EeeccceeccCCCccccc---ccCcceecccccCcHHhcCC-----CccCcHHHHHhHHHHHHHHHhCCCCccccccccc
Confidence 999999987654211000 01122345589999998653 3467889999999999999999988742110
Q ss_pred ----------h------------------cc----------------------------CCCCcchHHHHHHHhccCCCC
Q 004025 247 ----------R------------------NT----------------------------ASIPKSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 247 ----------~------------------~~----------------------------~~iP~~L~~~i~~lL~~dP~~ 270 (778)
. .. ......+.+++.+||..||.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~ 304 (317)
T cd07867 225 TSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTK 304 (317)
T ss_pred ccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCccc
Confidence 0 00 011223567899999999999
Q ss_pred CCChHHHHhcc
Q 004025 271 RLNSSKLIENS 281 (778)
Q Consensus 271 Rps~~~lL~~~ 281 (778)
|||+.++++|+
T Consensus 305 R~t~~e~l~hp 315 (317)
T cd07867 305 RITSEQALQDP 315 (317)
T ss_pred ccCHHHHhcCC
Confidence 99999999998
No 127
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=1.1e-30 Score=276.91 Aligned_cols=242 Identities=16% Similarity=0.213 Sum_probs=195.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||+|+++.+++.|+||++..... ......+.+|+++++.++||||+++++.+..+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (274)
T cd06609 2 LFTLLECIGKGSFG--EVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG------- 71 (274)
T ss_pred hhhhhhhhcCCCCe--EEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-------
Confidence 589999999987 7 899999999999999999986532 23455688999999999999999999998864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+ ++|.+++.... .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 72 -SKLWIIMEYCGGGSCLDLLKPGK----LDETYIAFILREVLLGLEYLHE-EGKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred -CeEEEEEEeeCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 4899999999 47988887652 2345577779999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
..+...... .........|++||++.+. .++.++|+|||||++|+|++|..||.......
T Consensus 146 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~~------~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 213 (274)
T cd06609 146 GQLTSTMSK------RNTFVGTPFWMAPEVIKQS------GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN 213 (274)
T ss_pred eeecccccc------cccccCCccccChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc
Confidence 877543111 1112334579999998763 47789999999999999999999885421100
Q ss_pred -c----C-CCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 249 -T----A-SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 249 -~----~-~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
. . .+|..+.+++.+||..+|.+||++.++++|+ |+....++
T Consensus 214 ~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~----~~~~~~~~ 260 (274)
T cd06609 214 NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHK----FIKKAKKT 260 (274)
T ss_pred CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhCh----hhcCCCcc
Confidence 0 1 2667789999999999999999999999998 55444443
No 128
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=3.4e-31 Score=288.03 Aligned_cols=231 Identities=16% Similarity=0.207 Sum_probs=179.4
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+.||.|+ | .||.|+++.+|+.|+||++.+... .+.....+..|.++++.+ +||||+++++.++.+ .+
T Consensus 1 ~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--------~~ 70 (316)
T cd05620 1 KVLGKGSFG--KVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--------EH 70 (316)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--------CE
Confidence 3578887 8 999999999999999999986421 112345567788888754 899999999999874 48
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~E~~~~g~L~~~i~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 71 LFFVMEFLNGGDLMFHIQDKGRF---DLYRATFYAAEIVCGLQFLHS-KGIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEECCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 99999999 5788888764322 233455668999999999995 89999999999999999999999999998753
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------c--
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--------T-- 249 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--------~-- 249 (778)
..... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||....... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~ 214 (316)
T cd05620 147 VFGDN------RASTFCGTPDYIAPEILQG------LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPH 214 (316)
T ss_pred ccCCC------ceeccCCCcCccCHHHHcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 22110 1112344568999999876 356789999999999999999999886432111 1
Q ss_pred --CCCCcchHHHHHHHhccCCCCCCCh-HHHHhcc
Q 004025 250 --ASIPKSLLPDYQRLLSSMPSRRLNS-SKLIENS 281 (778)
Q Consensus 250 --~~iP~~L~~~i~~lL~~dP~~Rps~-~~lL~~~ 281 (778)
..++..+.+++++||..||.+|+++ +++++|+
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~ 249 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIRGHP 249 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCC
Confidence 1245568889999999999999998 5788887
No 129
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=3.3e-31 Score=288.21 Aligned_cols=230 Identities=17% Similarity=0.216 Sum_probs=178.4
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhc-CCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~-LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.+... .+...+.+..|..++.. ++||||+++++.++.+ ..+
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~--------~~~ 71 (316)
T cd05592 2 VLGKGSFG--KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK--------EHL 71 (316)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC--------CEE
Confidence 578887 8 999999999999999999986422 12234445566666665 4799999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~gg~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~LH~-~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~ 147 (316)
T cd05592 72 FFVMEYLNGGDLMFHIQSSGR---FDEARARFYAAEIICGLQFLHK-KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENM 147 (316)
T ss_pred EEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHeEECCCCCEEEccCcCCeECC
Confidence 9999999 578888876542 2334456668999999999995 899999999999999999999999999987653
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------cc---
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------NT--- 249 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~~--- 249 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... ..
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~ 215 (316)
T cd05592 148 NGEG------KASTFCGTPDYIAPEILKG------QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHF 215 (316)
T ss_pred CCCC------ccccccCCccccCHHHHcC------CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 3211 0112234568999999876 35678899999999999999999998643211 11
Q ss_pred -CCCCcchHHHHHHHhccCCCCCCChH-HHHhcc
Q 004025 250 -ASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENS 281 (778)
Q Consensus 250 -~~iP~~L~~~i~~lL~~dP~~Rps~~-~lL~~~ 281 (778)
..++..+.+++.+||..+|.+|++.. ++++|+
T Consensus 216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~ 249 (316)
T cd05592 216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHP 249 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCc
Confidence 23556788899999999999999875 777887
No 130
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=4.4e-31 Score=289.05 Aligned_cols=243 Identities=14% Similarity=0.123 Sum_probs=188.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.++++.+++.|+||++.+... .....+.+++|+.+++.++||||++++++++++
T Consensus 2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (331)
T cd05597 2 DFEILKVIGRGAFG--EVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE------ 73 (331)
T ss_pred CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC------
Confidence 699999999998 8 999999999999999999975321 223455688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 148 (331)
T cd05597 74 --NNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQ-LGYVHRDIKPDNVLLDKNGHIRLADFGS 148 (331)
T ss_pred --CeEEEEEecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh-CCeEECCCCHHHEEECCCCCEEEEECCc
Confidence 4899999999 579999876431 12344566679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+..+...... ......++..|+|||++...-. ....++.++|+|||||++|+|++|..||.......
T Consensus 149 ~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05597 149 CLRLLADGTV-----QSNVAVGTPDYISPEILQAMED-GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred eeecCCCCCc-----cccceeccccccCHHHHhhccc-cccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence 8766542211 1111235568999999863100 01245678999999999999999999886432110
Q ss_pred ----------cCCCCcchHHHHHHHhccCCC--CCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPS--RRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~--~Rps~~~lL~~~ 281 (778)
...+|..+.+++++||...++ .|+++.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp 267 (331)
T cd05597 223 HKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP 267 (331)
T ss_pred CCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence 123567788899998865444 388999999998
No 131
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=8.8e-31 Score=281.96 Aligned_cols=248 Identities=18% Similarity=0.239 Sum_probs=197.2
Q ss_pred hhhhhccccCCCCCCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004025 2 FKFLKGVVGGSGAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (778)
Q Consensus 2 ~~~lk~~~~~s~~~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn 80 (778)
|++++..++-.. ...+|++.+.+|.|. | +||+|+++.+|+.|+||.+...... ..+.+.+|+..++.++|||
T Consensus 5 ~~~~~~~~~~~~---~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~ 77 (296)
T cd06655 5 MEKLRTIVSIGD---PKKKYTRYEKIGQGASG--TVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPN 77 (296)
T ss_pred HHHHHHHHhcCC---CcceEEEEEEEecCCCe--EEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCc
Confidence 345555553222 456799999999998 8 8999999999999999999764332 3456889999999999999
Q ss_pred eeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 81 Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
|+++++.+..+ ..+|+|+||+ ++|..++..... ....+..++.||+.||.|||+ .+++||||+|+
T Consensus 78 iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~-~~i~H~dL~p~ 144 (296)
T cd06655 78 IVNFLDSFLVG--------DELFVVMEYLAGGSLTDVVTETCM----DEAQIAAVCRECLQALEFLHA-NQVIHRDIKSD 144 (296)
T ss_pred eeeeeeeEecC--------ceEEEEEEecCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHH
Confidence 99999999863 4899999999 468888865432 244566779999999999995 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~ 238 (778)
||+++.+|.+||+|||++......... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|.
T Consensus 145 Nili~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~~lltg~ 212 (296)
T cd06655 145 NVLLGMDGSVKLTDFGFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGE 212 (296)
T ss_pred HEEECCCCCEEEccCccchhccccccc------CCCcCCCccccCcchhcC------CCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999998876442111 111233458999999876 34667899999999999999999
Q ss_pred CCCChhhh---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 239 RLSKTEEL---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 239 ~p~~~~~l---------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.||..... .....++..+.+++++||..+|.+||++.++++|+
T Consensus 213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~ 270 (296)
T cd06655 213 PPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (296)
T ss_pred CCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 88754211 11234566788999999999999999999999998
No 132
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=8.8e-31 Score=274.31 Aligned_cols=238 Identities=20% Similarity=0.259 Sum_probs=191.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | ++|.++.+.+|+.|+||.+............+.+|+.++++++||||+++++.++..
T Consensus 1 ~y~~~~~lg~g~~g--~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd08218 1 KYVKVKKIGEGSFG--KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN------- 71 (256)
T ss_pred CceEEEEeccCCce--EEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC-------
Confidence 589999999998 8 899999999999999999986544444456789999999999999999999999763
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+.|+|+||+ ++|.+++....... .....+..++.||+.||.|||+ ++++|+||+|+||+++.++.++|+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 72 -GNLYIVMDYCEGGDLYKKINAQRGVL-FPEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred -CeEEEEEecCCCCcHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 4899999999 47988887643211 1233455558999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....+...|+|||+..+. ..+.++|+|||||++|+|++|..++.......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~~pe~~~~~------~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (256)
T cd08218 149 RVLNSTVEL------ARTCIGTPYYLSPEICENR------PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG 216 (256)
T ss_pred eecCcchhh------hhhccCCccccCHHHhCCC------CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC
Confidence 876542110 1112234579999998763 45678999999999999999998875432111
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~ 254 (256)
T cd08218 217 SYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKN 254 (256)
T ss_pred CCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCc
Confidence 124566788999999999999999999999997
No 133
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=8.8e-31 Score=278.59 Aligned_cols=239 Identities=16% Similarity=0.266 Sum_probs=189.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.++++.|. | +||+|+++.+|..|+||++...... .....+.+|+.+++.++||||+++++.+..+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 70 (284)
T cd07836 1 NFKQLEKLGEGTYA--TVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTE------- 70 (284)
T ss_pred CceEeeeeccCCce--EEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-------
Confidence 589999999997 7 8999999999999999999865332 2345677899999999999999999999874
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+||||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++++|.+||+|||++.
T Consensus 71 -~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 71 -NKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE-NRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred -CcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 3789999999 5788888765432223445566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ .....+...|++||++.+. ..++.++|+|+|||++|+|++|.++|......
T Consensus 149 ~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 217 (284)
T cd07836 149 AFGIPVNT------FSNEVVTLWYRAPDVLLGS-----RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM 217 (284)
T ss_pred hhcCCccc------cccccccccccChHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 65432110 0111234479999987653 34567899999999999999999887532100
Q ss_pred ------------c-------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------------N-------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------------~-------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||+.+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~ 282 (284)
T cd07836 218 GTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHP 282 (284)
T ss_pred CCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCC
Confidence 0 013456778899999999999999999999997
No 134
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=5.4e-31 Score=291.51 Aligned_cols=231 Identities=12% Similarity=0.109 Sum_probs=180.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|. | +||+|+++.++..|++|+.... ...+|+.+|++++||||+++++++...
T Consensus 64 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 129 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEG--RVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSG---- 129 (357)
T ss_pred hhcCcEEEEEecCCCCe--EEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeC----
Confidence 345799999999998 8 9999999999999999985432 234689999999999999999999864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...|+|+|++ ++|..++...... .....+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 130 ----~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 130 ----AITCMVLPHYSSDLYTYLTKRSRP--LPIDQALIIEKQILEGLRYLHA-QRIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred ----CeeEEEEEccCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEecCc
Confidence 3789999999 6788888654321 2234456679999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC-CCChh---------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTE--------- 244 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~-p~~~~--------- 244 (778)
+++....... .....++..|+|||++.+ ..++.++|+|||||++|||+++.. +|...
T Consensus 203 ~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~ 269 (357)
T PHA03209 203 AAQFPVVAPA-------FLGLAGTVETNAPEVLAR------DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK 269 (357)
T ss_pred cccccccCcc-------cccccccccccCCeecCC------CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHH
Confidence 9875432110 112234568999999876 356789999999999999998543 32210
Q ss_pred ----hhh------------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 245 ----ELR------------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 245 ----~l~------------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
.+. ....++..+..++.+||+.||.+|||+.+++
T Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l 349 (357)
T PHA03209 270 SCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEIL 349 (357)
T ss_pred HHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHh
Confidence 000 0013455566789999999999999999999
Q ss_pred hcc
Q 004025 279 ENS 281 (778)
Q Consensus 279 ~~~ 281 (778)
+|+
T Consensus 350 ~hp 352 (357)
T PHA03209 350 NYP 352 (357)
T ss_pred cCc
Confidence 998
No 135
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=3.2e-31 Score=290.21 Aligned_cols=246 Identities=17% Similarity=0.257 Sum_probs=193.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | .||.|+++.+|..|+||++............+.+|+.+|+.++||||++++++++....+
T Consensus 5 ~~y~~~~~lg~g~~g--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--- 79 (334)
T cd07855 5 SRYKPIENIGSGAYG--VVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGAD--- 79 (334)
T ss_pred hceeeeeeeecCCCe--EEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCC---
Confidence 5799999999987 7 899999999999999999986543334456678899999999999999999988754322
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+|+|+||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 80 -~~~~~lv~e~~~~~l~~~~~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 80 -FKDVYVVMDLMESDLHHIIHSDQP---LTEEHIRYFLYQLLRGLKYIHS-ANVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred -CceEEEEEehhhhhHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEecccccc
Confidence 35899999999 567777754332 3345567779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
.......... ........++..|+|||.+.+. ..++.++|+|||||++|||++|.+||.....
T Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~ 227 (334)
T cd07855 155 RGLSSSPTEH--KYFMTEYVATRWYRAPELLLSL-----PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSV 227 (334)
T ss_pred eeecccCcCC--CcccccccccccccChHHhcCC-----cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHH
Confidence 7765432111 1111123445689999997652 2467789999999999999999988843210
Q ss_pred -----------------h----c------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------R----N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------~----~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. . ...++..+.+++++||+.+|.+||++.+++.|+
T Consensus 228 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 228 LGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 0 0 123567788999999999999999999999998
No 136
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=2.3e-31 Score=290.30 Aligned_cols=230 Identities=15% Similarity=0.179 Sum_probs=178.0
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHH-HHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGV-KRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev-~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.++.... .....+.+|. ..++.++||||+++++.++.+ ..+
T Consensus 2 ~lg~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--------~~~ 71 (325)
T cd05602 2 VIGKGSFG--KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--------DKL 71 (325)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--------CeE
Confidence 578887 8 99999999999999999998642211 1222333343 457889999999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~L~~lH~-~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~ 147 (325)
T cd05602 72 YFVLDYINGGELFYHLQRERC---FLEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 147 (325)
T ss_pred EEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEEccCCCCcccc
Confidence 9999999 478888876432 2234456678999999999995 999999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------------c
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------N 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------------~ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||...... .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (325)
T cd05602 148 EHNG------TTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL 215 (325)
T ss_pred cCCC------CcccccCCccccCHHHHcC------CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC
Confidence 2211 0112245568999999876 35678999999999999999999988542211 1
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChH----HHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNSS----KLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~~----~lL~~~ 281 (778)
...++..+.+++++||..+|.+|++.. ++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~ 252 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHI 252 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCc
Confidence 235777889999999999999999876 677776
No 137
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=3.1e-31 Score=288.67 Aligned_cols=230 Identities=15% Similarity=0.187 Sum_probs=176.0
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHH-HHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGV-KRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev-~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|. .+++.++||||+++++.++.. ..+
T Consensus 2 ~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--------~~~ 71 (321)
T cd05603 2 VIGKGSFG--KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA--------EKL 71 (321)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC--------CEE
Confidence 577787 7 9999999999999999999864321 12223344444 468899999999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||| ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 147 (321)
T cd05603 72 YFVLDYVNGGELFFHLQRERC---FLEPRARFYAAEVASAIGYLHS-LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGV 147 (321)
T ss_pred EEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEccCCCCccCC
Confidence 9999999 478877765432 2344466679999999999995 999999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------c---
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--------T--- 249 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--------~--- 249 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||....... .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (321)
T cd05603 148 EPEE------TTSTFCGTPEYLAPEVLRK------EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQL 215 (321)
T ss_pred CCCC------ccccccCCcccCCHHHhcC------CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 2111 0112234568999999876 356779999999999999999999986432211 1
Q ss_pred -CCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 250 -ASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 250 -~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
...+..+.+++.+||+.+|.+|++. .++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~ 252 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHV 252 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCC
Confidence 1234457889999999999999976 4777776
No 138
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=9.5e-31 Score=282.70 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=189.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~-~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
.|++.+.||.|+ | .||+|+++. ++..|+||.+.... ..+...+.+.+|+.+++.++||||+++++.+....
T Consensus 1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 75 (316)
T cd07842 1 KYEIEGCIGRGTYG--RVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHA--- 75 (316)
T ss_pred CceEEEEeccCCcE--EEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC---
Confidence 489999999998 7 899999998 89999999998643 11233456788999999999999999999998753
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCC--CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC----CCcE
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEG--SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ----TLDW 168 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~--~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~----~g~~ 168 (778)
...+|+||||+ ++|..++....... ......+..++.||+.||.|||+ .+++||||||+||+++. +|.+
T Consensus 76 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 76 ---DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS-NWVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred ---CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEEcCCCCccceE
Confidence 24899999999 46777776543221 23445577789999999999995 89999999999999999 9999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN 248 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~ 248 (778)
||+|||++..+...... ........++..|+|||++.+. ..++.++|+|||||++|+|++|.++|.......
T Consensus 152 kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~ 223 (316)
T cd07842 152 KIGDLGLARLFNAPLKP---LADLDPVVVTIWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKI 223 (316)
T ss_pred EECCCccccccCCCccc---ccccCCccccccccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccc
Confidence 99999998876543210 1111122345579999987653 345678999999999999999998875321100
Q ss_pred -------------------------------------------cC---------------CCCcchHHHHHHHhccCCCC
Q 004025 249 -------------------------------------------TA---------------SIPKSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 249 -------------------------------------------~~---------------~iP~~L~~~i~~lL~~dP~~ 270 (778)
.. ..+..+.+++.+||..||++
T Consensus 224 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 303 (316)
T cd07842 224 KKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTK 303 (316)
T ss_pred cccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCccc
Confidence 00 23345778899999999999
Q ss_pred CCChHHHHhcc
Q 004025 271 RLNSSKLIENS 281 (778)
Q Consensus 271 Rps~~~lL~~~ 281 (778)
||++.++++|+
T Consensus 304 Rps~~eil~~~ 314 (316)
T cd07842 304 RITAEEALEHP 314 (316)
T ss_pred CcCHHHHhcCC
Confidence 99999999998
No 139
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=291.62 Aligned_cols=232 Identities=17% Similarity=0.202 Sum_probs=182.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
+.+.++||.|. | .||.|+.+ ....|+||.+...... .+.+.+|+++|++|+|+|||++++++..+.
T Consensus 208 l~l~~~LG~G~FG--~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~------- 274 (468)
T KOG0197|consen 208 LKLIRELGSGQFG--EVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQE------- 274 (468)
T ss_pred HHHHHHhcCCccc--eEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCC-------
Confidence 45567899999 9 99999996 3459999999865333 345679999999999999999999998642
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
-+||||||+ |+|.++|+....... ....+..+..||++||+||++ .++|||||...||+|++++.+||+|||+++
T Consensus 275 -piyIVtE~m~~GsLl~yLr~~~~~~l-~~~~Ll~~a~qIaeGM~YLes-~~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 275 -PIYIVTEYMPKGSLLDYLRTREGGLL-NLPQLLDFAAQIAEGMAYLES-KNYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred -ceEEEEEecccCcHHHHhhhcCCCcc-chHHHHHHHHHHHHHHHHHHh-CCccchhhhhhheeeccCceEEEccccccc
Confidence 599999999 789999998332222 223345569999999999996 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----h------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L------ 246 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l------ 246 (778)
...++.... ......+..|.|||.+..+ .++.++|+||||++|||||+ |+.|+.... +
T Consensus 352 ~~~d~~Y~~-----~~~~kfPIkWtAPEa~~~~------~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G 420 (468)
T KOG0197|consen 352 LIGDDEYTA-----SEGGKFPIKWTAPEALNYG------KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG 420 (468)
T ss_pred ccCCCceee-----cCCCCCCceecCHHHHhhC------CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc
Confidence 655432111 1122334489999999873 67889999999999999999 555554321 1
Q ss_pred ---hccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 ---RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 ---~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
.....+|..+.++++.|+..+|+.|||++.+..
T Consensus 421 yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 421 YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence 123568899999999999999999999986653
No 140
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=2.2e-30 Score=271.29 Aligned_cols=238 Identities=21% Similarity=0.260 Sum_probs=193.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||.++.+.+++.|++|.+............+.+|+.+|++++||||++++++++.+
T Consensus 1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------- 71 (256)
T cd08221 1 HYIPIRVLGKGAFG--EATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD------- 71 (256)
T ss_pred CceEeeEecccCCc--eEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-------
Confidence 589999999998 7 788888889999999999987655555566788999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|++|||| ++|.+++..... .......+..++.|++.+|.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~~~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 72 -NTLLIEMEYANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIHK-AGILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred -CeEEEEEEecCCCcHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChHhEEEeCCCCEEECcCcce
Confidence 3899999999 579998876531 122344566779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....++..|+|||+..+ ..++.++|+|||||++|||++|..+|.......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~y~ape~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (256)
T cd08221 149 KILGSEYSM------AETVVGTPYYMSPELCQG------VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG 216 (256)
T ss_pred EEccccccc------ccccCCCccccCHhhcCC------CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence 876543210 111234568999999876 245678999999999999999998876432111
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|..||++.++++++
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 217 NYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 123566788999999999999999999999987
No 141
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.97 E-value=1e-30 Score=281.98 Aligned_cols=241 Identities=15% Similarity=0.150 Sum_probs=182.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC----------------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----------------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~----------------~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP 79 (778)
+..+|.+.++||.|+ | .||.|+.+. ++..|+||++.... .......+.+|+++|++++||
T Consensus 3 ~~~~~~~~~~lg~G~fg--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~ 79 (304)
T cd05096 3 PRGHLLFKEKLGEGQFG--EVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDP 79 (304)
T ss_pred chhhCeeeeEecccCCe--EEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCC
Confidence 456799999999998 8 899997532 34479999987543 233456688999999999999
Q ss_pred CeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCC----------------cchHHHHHHHHHHHHHH
Q 004025 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS----------------QRDEYYAWGLNQIAKAV 141 (778)
Q Consensus 80 nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~----------------~~~~~i~~gl~QI~~aL 141 (778)
||+++++++..++ .+||||||+ ++|.+++........ .....+..++.||+.||
T Consensus 80 niv~~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 151 (304)
T cd05096 80 NIIRLLGVCVDED--------PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGM 151 (304)
T ss_pred CeeEEEEEEecCC--------ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 9999999998643 789999999 579998876432111 11233556699999999
Q ss_pred HHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCc
Q 004025 142 SFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWS 221 (778)
Q Consensus 142 ~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~ 221 (778)
.|||+ .+++||||||+||+++.+|.+||+|||+++.+...... ........+..|+|||++.++ .++.+
T Consensus 152 ~~lH~-~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~ 220 (304)
T cd05096 152 KYLSS-LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY----RIQGRAVLPIRWMAWECILMG------KFTTA 220 (304)
T ss_pred HHHHH-CCccccCcchhheEEcCCccEEECCCccceecccCcee----EecCcCCCCccccCHHHHhcC------CCCch
Confidence 99995 89999999999999999999999999999866432110 000111224579999998753 46779
Q ss_pred chhHHHHHHHHHHHhC--CCCCCh---hhh--------h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 222 IDSWGLGCLIYELFSG--MRLSKT---EEL--------R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 222 ~DiwSLG~liyel~tg--~~p~~~---~~l--------~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
+|+|||||++|||+++ ..|+.. .+. . ....+|..+.+++.+||..+|.+||++.++.+
T Consensus 221 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 221 SDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 9999999999999874 445432 110 0 01245778999999999999999999998864
No 142
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=1.2e-30 Score=278.02 Aligned_cols=230 Identities=18% Similarity=0.202 Sum_probs=178.2
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
||.|+ | +||+++.+.+|+.|++|.+..+.... .....+..|+.+++.++||||+++++.++.+ .++|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~--------~~~~l 70 (277)
T cd05607 1 LGKGGFG--EVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK--------THLCL 70 (277)
T ss_pred CCCCCce--EEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC--------CeEEE
Confidence 46676 7 89999999999999999997543221 2234456799999999999999999999864 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 71 v~e~~~g~~L~~~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 71 VMSLMNGGDLKYHIYNVGERG-LEMERVIHYSAQITCGILHLHS-MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred EEecCCCCCHHHHHHhccccC-CCHHHHHHHHHHHHHHHHHHHH-CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999 47888776544222 2233345568999999999995 99999999999999999999999999998776542
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-------hh-hc------
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-------EL-RN------ 248 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-------~l-~~------ 248 (778)
.. .....++..|+|||++.+. .++.++|+|||||++|||++|..||... .+ ..
T Consensus 149 ~~-------~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd05607 149 KT-------ITQRAGTNGYMAPEILKEE------PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV 215 (277)
T ss_pred ce-------eeccCCCCCccCHHHHccC------CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc
Confidence 11 1112345589999998763 4778999999999999999999887531 11 00
Q ss_pred ---cCCCCcchHHHHHHHhccCCCCCCChH----HHHhcc
Q 004025 249 ---TASIPKSLLPDYQRLLSSMPSRRLNSS----KLIENS 281 (778)
Q Consensus 249 ---~~~iP~~L~~~i~~lL~~dP~~Rps~~----~lL~~~ 281 (778)
...++..+.+++.+||+.||.+||++. +++.|+
T Consensus 216 ~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~ 255 (277)
T cd05607 216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHE 255 (277)
T ss_pred ccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcCh
Confidence 124677789999999999999999994 555665
No 143
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=8e-31 Score=293.88 Aligned_cols=233 Identities=15% Similarity=0.210 Sum_probs=183.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...|++.+.||.|+ | +||.|..+. ++..|+||.+... ....+|+++|++|+||||+++++.+..+
T Consensus 91 ~~~y~i~~~Lg~G~~g--~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~--- 158 (392)
T PHA03207 91 RMQYNILSSLTPGSEG--EVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWK--- 158 (392)
T ss_pred cCceEEEEeecCCCCe--EEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeC---
Confidence 45699999999998 8 899998653 4578999987643 1345899999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+|||++ ++|..++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 159 -----~~~~lv~e~~~~~l~~~l~~~~~---l~~~~~~~i~~ql~~aL~~LH~-~givHrDlkp~Nill~~~~~~~l~Df 229 (392)
T PHA03207 159 -----STVCMVMPKYKCDLFTYVDRSGP---LPLEQAITIQRRLLEALAYLHG-RGIIHRDVKTENIFLDEPENAVLGDF 229 (392)
T ss_pred -----CEEEEEehhcCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCCCEEEccC
Confidence 3899999999 578888854332 2334466679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++..+..... ....+.+.++..|+|||++.+ ..++.++|+|||||++|||++|+.||.....
T Consensus 230 G~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l 299 (392)
T PHA03207 230 GAACKLDAHPD----TPQCYGWSGTLETNSPELLAL------DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL 299 (392)
T ss_pred ccccccCcccc----cccccccccccCccCHhHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence 99877654221 111223455679999999876 3567899999999999999999877743210
Q ss_pred hc---------------------------------c---------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RN---------------------------------T---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~---------------------------------~---------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..++..+..++++||..+|.+||++.+++.|+
T Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 300 RSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred HHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00 0 12244566789999999999999999999998
No 144
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=1.4e-30 Score=275.51 Aligned_cols=241 Identities=16% Similarity=0.254 Sum_probs=190.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--------hhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--------DGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~--------~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
|+|.+.+.+|.|+ | .||+|.++.+|+.|+||.+...... ....+.+.+|+.+++.++||||++++++++
T Consensus 1 ~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 78 (272)
T cd06629 1 FKWVKGELIGKGTYG--RVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET 78 (272)
T ss_pred CceeecceecccCce--EEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec
Confidence 6799999999998 7 9999999999999999998643211 123456889999999999999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~ 167 (778)
.. ..+|+||||+ ++|.+++...+. .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.
T Consensus 79 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~~~nil~~~~~~ 146 (272)
T cd06629 79 TE--------EYLSIFLEYVPGGSIGSCLRTYGR---FEEQLVRFFTEQVLEGLAYLHS-KGILHRDLKADNLLVDADGI 146 (272)
T ss_pred cC--------CceEEEEecCCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHhh-CCeeecCCChhhEEEcCCCe
Confidence 63 4899999999 579998877532 2334566679999999999995 89999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l- 246 (778)
+||+|||++........ ........+...|++||++.+.. ..++.++|+||||+++|++++|..|+.....
T Consensus 147 ~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~----~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 218 (272)
T cd06629 147 CKISDFGISKKSDDIYD----NDQNMSMQGSVFWMAPEVIHSYS----QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI 218 (272)
T ss_pred EEEeecccccccccccc----ccccccccCCccccCHHHhcccc----CCCCccchhHHHHHHHHHHHhCCCCCcCcchH
Confidence 99999999876543211 00011122345899999987531 2367889999999999999999988753211
Q ss_pred ---hc--------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---RN--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---~~--------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||..+|..||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (272)
T cd06629 219 AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHP 270 (272)
T ss_pred HHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence 00 124577789999999999999999999999998
No 145
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=1.4e-30 Score=282.30 Aligned_cols=244 Identities=16% Similarity=0.217 Sum_probs=191.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|. | +||.|++..++..|+||.+....... .....+.+|++.|+.++||||+++++.++..
T Consensus 2 ~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 73 (316)
T cd05574 2 HFKKIKLLGKGDVG--RVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE------ 73 (316)
T ss_pred ceEEeeeecCCccE--EEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC------
Confidence 699999999998 7 89999999999999999998754332 3566788999999999999999999999763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.++|+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 74 --TYLCLVMDYCPGGELFRLLQRQPG-KCLSEEVARFYAAEVLLALEYLHL-LGIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred --CEEEEEEEecCCCCHHHHHHhCCC-CccCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChHHeEEcCCCCEEEeecch
Confidence 4899999999 579988875432 122334456678999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-----------------------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 176 LSEFDGNNEAANG-----------------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 176 a~~~~~~~~~~~~-----------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
+............ ........++..|+|||++.+. .++.++|+|||||++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Di~slG~ll~ 223 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD------GHGSAVDWWTLGILLY 223 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC------CCCchHHHHHHHHHHH
Confidence 8765432111000 0000112334579999998763 4677899999999999
Q ss_pred HHHhCCCCCChhh----hhc----------cCCCCcchHHHHHHHhccCCCCCCC----hHHHHhcc
Q 004025 233 ELFSGMRLSKTEE----LRN----------TASIPKSLLPDYQRLLSSMPSRRLN----SSKLIENS 281 (778)
Q Consensus 233 el~tg~~p~~~~~----l~~----------~~~iP~~L~~~i~~lL~~dP~~Rps----~~~lL~~~ 281 (778)
+|++|..||.... +.. ...+|..+.+++++||..+|.+||+ +.++++|+
T Consensus 224 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 224 EMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred HHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 9999998875321 110 1225777999999999999999999 99999998
No 146
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1e-30 Score=275.86 Aligned_cols=240 Identities=15% Similarity=0.195 Sum_probs=190.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|. | .||.|++..+++.|+||++..... .....+.+|+..++.++||||+++++.+...
T Consensus 7 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~---- 78 (267)
T cd06645 7 PQEDFELIQRIGSGTYG--DVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR---- 78 (267)
T ss_pred cHHHHHHHHHhCCCCCe--EEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC----
Confidence 456899999999998 7 899999999999999999976432 2345678899999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++...+. .....+.+++.||+.||.|||+ .+++|+||||+||+++.+|.+||+||
T Consensus 79 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~~~~l~df 150 (267)
T cd06645 79 ----DKLWICMEFCGGGSLQDIYHVTGP---LSESQIAYVSRETLQGLYYLHS-KGKMHRDIKGANILLTDNGHVKLADF 150 (267)
T ss_pred ----CEEEEEEeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECcc
Confidence 4899999999 479998876542 2345577779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h---
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l--- 246 (778)
|++......... .....+...|+|||++... ....++.++|+|||||++|+|++|..|+.... +
T Consensus 151 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~---~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~ 221 (267)
T cd06645 151 GVSAQITATIAK------RKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM 221 (267)
T ss_pred eeeeEccCcccc------cccccCcccccChhhhccc---cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh
Confidence 998766432110 1112344589999987421 01346679999999999999999988763211 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~ 266 (267)
T cd06645 222 TKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHP 266 (267)
T ss_pred hccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCC
Confidence 00123556788899999999999999999999997
No 147
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=2.7e-31 Score=289.82 Aligned_cols=230 Identities=16% Similarity=0.194 Sum_probs=177.8
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHH-HHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||.|+++.+|+.|+||++.++... ......+.+|.. .++.++||||+++++.++.+ ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~--------~~~ 71 (325)
T cd05604 2 VIGKGSFG--KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT--------EKL 71 (325)
T ss_pred ceeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC--------CEE
Confidence 578887 7 9999999999999999999864221 122334445544 57789999999999999864 389
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ +.|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~-~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~ 147 (325)
T cd05604 72 YFVLDFVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHS-INIVYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (325)
T ss_pred EEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEEeecCCcccCC
Confidence 9999999 468887765432 2344566779999999999995 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||.......
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~ 215 (325)
T cd05604 148 AQSD------TTTTFCGTPEYLAPEVIRK------QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVL 215 (325)
T ss_pred CCCC------CcccccCChhhCCHHHHcC------CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccC
Confidence 2111 0112234568999999876 356779999999999999999999886432111
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
...++..+.+++++||..+|.+|++. .++++|+
T Consensus 216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~ 252 (325)
T cd05604 216 RPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHP 252 (325)
T ss_pred CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCC
Confidence 12456677889999999999999976 5888887
No 148
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=1.4e-30 Score=278.92 Aligned_cols=245 Identities=16% Similarity=0.220 Sum_probs=191.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|. | +||+|+++.+|+.|+||.+............+.+|+.+++.++ ||||+++++++.....++
T Consensus 2 ~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~-- 77 (295)
T cd07837 2 AYEKLEKIGEGTYG--KVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG-- 77 (295)
T ss_pred CceEeeEecccCCe--EEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC--
Confidence 699999999998 8 8999999999999999998765433334456788999999996 699999999987654211
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcC--CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEec
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dF 173 (778)
...+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++. ++.+||+||
T Consensus 78 -~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 78 -KPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK-HGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred -CceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEecCCCeEEEeec
Confidence 23589999999 5788887654322 223445566779999999999995 89999999999999998 899999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-hh-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LR----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-l~----- 247 (778)
|++..+...... .........|+|||.+.+. ..++.++|+|||||++|+|++|.+||.... ..
T Consensus 156 g~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~ 224 (295)
T cd07837 156 GLGRAFSIPVKS------YTHEIVTLWYRAPEVLLGS-----THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHI 224 (295)
T ss_pred ccceecCCCccc------cCCcccccCCCChHHhhCC-----CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 998765432110 0111234579999987653 345778999999999999999998874311 00
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.+++.|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~ 292 (295)
T cd07837 225 FKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHP 292 (295)
T ss_pred HHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCC
Confidence 0124667788999999999999999999999998
No 149
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=1.4e-30 Score=279.22 Aligned_cols=239 Identities=16% Similarity=0.262 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|. | +||+|+++.+|+.|+||.+......+.....+.+|++++++++||||+++++++...
T Consensus 3 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 73 (294)
T PLN00009 3 QYEKVEKIGEGTYG--VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE------- 73 (294)
T ss_pred ceEEEEEecCCCCE--EEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-------
Confidence 699999999987 7 999999999999999999876544444456788999999999999999999999863
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEecccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dFgla 176 (778)
.+.|+||||+ ++|..++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++. ++.+||+|||++
T Consensus 74 -~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dl~p~nill~~~~~~~kl~dfg~~ 150 (294)
T PLN00009 74 -KRLYLVFEYLDLDLKKHMDSSPDF-AKNPRLIKTYLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLA 150 (294)
T ss_pred -CeEEEEEecccccHHHHHHhCCCC-CcCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCcceEEEECCCCEEEEcccccc
Confidence 4899999999 5677777654322 12334455668999999999995 89999999999999985 567999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~----- 247 (778)
......... .....+...|+|||++.+. ..++.++|+|||||++|+|++|.++|.... +.
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~ 219 (294)
T PLN00009 151 RAFGIPVRT------FTHEVVTLWYRAPEILLGS-----RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 219 (294)
T ss_pred cccCCCccc------cccCceeecccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 765432110 0111234579999987653 345678999999999999999998874321 00
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||+.+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~ 285 (294)
T PLN00009 220 LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHE 285 (294)
T ss_pred hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0123566778899999999999999999999997
No 150
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=1.1e-30 Score=281.19 Aligned_cols=251 Identities=16% Similarity=0.255 Sum_probs=189.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+++|.|+ | .||+|+++.+++.|+||.+......+.....+.+|++.+++++||||+++++++......+..
T Consensus 12 ~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 12 SKYEKLAKIGQGTFG--EVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hheEEEEEeecCCCE--EEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3699999999997 7 999999999999999999876543333344567899999999999999999998764321111
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||+ +.|..++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHR-NKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 234789999999 467777765431 12344567779999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------c-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------N- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------~- 248 (778)
..+......... ......+...|+|||++.+. ..++.++|+|||||++|||++|.++|...... .
T Consensus 167 ~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~ 239 (310)
T cd07865 167 RAFSLSKNSKPN--RYTNRVVTLWYRPPELLLGE-----RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQL 239 (310)
T ss_pred ccccCCcccCCC--CccCcccCccccCcHHhcCC-----cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 876543211100 01112334589999987653 23567899999999999999998877532110 0
Q ss_pred cC-------------------C-----------------CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 TA-------------------S-----------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~~-------------------~-----------------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ....+.+++.+||..||.+||+++++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~ 308 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHD 308 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence 00 0 123356789999999999999999999998
No 151
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=9.6e-31 Score=280.09 Aligned_cols=238 Identities=14% Similarity=0.047 Sum_probs=181.3
Q ss_pred Cceec--cCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIG--DPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~--~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
++++. ..++.|+ ...||+|+. +|+.|+||.+....... ...+.+.+|+.+|++++||||+++++++.+...+
T Consensus 19 ~i~~~~~~~i~~g~-~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~-- 93 (283)
T PHA02988 19 DIDKYTSVLIKEND-QNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDD-- 93 (283)
T ss_pred HcCCCCCeEEeeCC-ceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccC--
Confidence 34444 3345554 338999998 68999999997643322 3357788999999999999999999998751111
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..++|+||||+ ++|.+++....... ......++.|++.||.|||+..+++||||||+||+++.+|.+||+|||
T Consensus 94 --~~~~~lv~Ey~~~g~L~~~l~~~~~~~---~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg 168 (283)
T PHA02988 94 --LPRLSLILEYCTRGYLREVLDKEKDLS---FKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHG 168 (283)
T ss_pred --CCceEEEEEeCCCCcHHHHHhhCCCCC---hhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccc
Confidence 34799999999 46999997654221 222334589999999999964689999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++..+.... ....++..|+|||++.+.. ..++.++|+|||||++|||++|..||.......
T Consensus 169 ~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~----~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~ 235 (283)
T PHA02988 169 LEKILSSPP---------FKNVNFMVYFSYKMLNDIF----SEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLII 235 (283)
T ss_pred hHhhhcccc---------ccccCcccccCHHHhhhcc----ccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 988654321 1123445899999986521 356789999999999999999999986432110
Q ss_pred -------c-CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -------T-ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -------~-~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ..+|..+.+++.+||+.||..||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 236 NKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred hcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 0 1456778999999999999999999999875
No 152
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=1.3e-30 Score=277.38 Aligned_cols=238 Identities=17% Similarity=0.284 Sum_probs=188.3
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.+|.|. | .||+|+++.+|..|+||++............+.+|++.++.++||||+++++.+...
T Consensus 1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-------- 70 (283)
T cd07835 1 YQKVEKIGEGTYG--VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-------- 70 (283)
T ss_pred CchheEecCCCCe--EEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--------
Confidence 77888999987 7 899999999999999999986544444455688999999999999999999998763
Q ss_pred cEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
...|++|||+ .+|..++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~iv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~~L~~lH~-~~~~H~dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 71 NKLYLVFEFLDLDLKKYMDSSPLT-GLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred CeEEEEEeccCcCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence 4899999999 5788888765421 12344456679999999999995 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------------ 246 (778)
....... .........|+|||++.+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 149 ~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (283)
T cd07835 149 FGVPVRT------YTHEVVTLWYRAPEILLGS-----RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLG 217 (283)
T ss_pred cCCCccc------cCccccccCCCCCceeecC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 5432110 0011234579999987653 2356789999999999999999988742210
Q ss_pred -----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||+.+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~ 281 (283)
T cd07835 218 TPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHP 281 (283)
T ss_pred CCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCC
Confidence 00124556788899999999999999999999997
No 153
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=1.3e-30 Score=279.17 Aligned_cols=233 Identities=18% Similarity=0.242 Sum_probs=190.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | .||.+.++.+++.|+||++...... ....+.+.+|++.++++.||||+++++++...
T Consensus 2 ~y~~~~~ig~g~~~--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 73 (290)
T cd05580 2 DFEFIKTLGTGSFG--RVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD------ 73 (290)
T ss_pred ceEEEEEeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC------
Confidence 699999999997 6 9999999999999999999754322 23456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||+|.||+|+.+|.+||+|||+
T Consensus 74 --~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qil~~l~~lH~-~~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 74 --SNLYLVMEYVPGGELFSHLRKSGR---FPEPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred --CeEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 4899999999 479998877542 2344466679999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+...... .....++..|++||.+.+ ...+.++|+||||+++|+|++|..||..... ..
T Consensus 148 ~~~~~~~---------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 212 (290)
T cd05580 148 AKRVKGR---------TYTLCGTPEYLAPEIILS------KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE 212 (290)
T ss_pred ccccCCC---------CCCCCCCccccChhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 8876542 111234458999999865 3456789999999999999999988754321 11
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...++..+.+++++||..+|.+|+ ++.++++|+
T Consensus 213 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~ 255 (290)
T cd05580 213 GKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP 255 (290)
T ss_pred CCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCc
Confidence 123456788999999999999999 889999997
No 154
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=2e-30 Score=271.11 Aligned_cols=235 Identities=17% Similarity=0.207 Sum_probs=190.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|++.+.++.|. | .||+|+.+.++..|++|.+.... ..+.+.+|++.++.++||||+++++.+..+
T Consensus 2 ~~~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----- 70 (256)
T cd06612 2 EEVFDILEKLGEGSYG--SVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKN----- 70 (256)
T ss_pred cccchhhhhhcCCCCe--EEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----
Confidence 45799999999997 7 89999999889999999997532 156789999999999999999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+++||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 71 ---~~~~l~~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~ni~~~~~~~~~l~dfg 144 (256)
T cd06612 71 ---TDLWIVMEYCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHS-NKKIHRDIKAGNILLNEEGQAKLADFG 144 (256)
T ss_pred ---CcEEEEEecCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEECCCCcEEEcccc
Confidence 4899999999 479988865432 12344566779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++......... .....+...|++||++.+ ..++.++|+|||||++|+|++|.+|+......
T Consensus 145 ~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~ 212 (256)
T cd06612 145 VSGQLTDTMAK------RNTVIGTPFWMAPEVIQE------IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP 212 (256)
T ss_pred cchhcccCccc------cccccCCccccCHHHHhc------CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc
Confidence 98876543211 111123458999999876 35677899999999999999999887532110
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+|+..+|..||++.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~ 254 (256)
T cd06612 213 NKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHP 254 (256)
T ss_pred cCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCC
Confidence 0123456788899999999999999999999997
No 155
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=7.9e-31 Score=279.27 Aligned_cols=237 Identities=20% Similarity=0.261 Sum_probs=187.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||+|.++.+++.|+||.+..........+.+.+|+++++.++||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 72 (286)
T cd07846 2 KYENLGLVGEGSYG--MVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK------- 72 (286)
T ss_pred ceeEeeeeccCCCe--EEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-------
Confidence 699999999998 8 899999999999999999876544444456788999999999999999999999763
Q ss_pred ccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+. .|..+...... .....+..++.||+.||.|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~-~~i~h~~l~p~ni~~~~~~~~~l~dfg~~ 147 (286)
T cd07846 73 -KRLYLVFEFVDHTVLDDLEKYPNG---LDESRVRKYLFQILRGIEFCHS-HNIIHRDIKPENILVSQSGVVKLCDFGFA 147 (286)
T ss_pred -CeEEEEEecCCccHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCcEEEEeeeee
Confidence 48999999993 45555443221 2344566679999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
..+...... .....+...|++||++.+. ..++.++|+|||||++|||++|.++|.....
T Consensus 148 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~ 216 (286)
T cd07846 148 RTLAAPGEV------YTDYVATRWYRAPELLVGD-----TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKC 216 (286)
T ss_pred eeccCCccc------cCcccceeeccCcHHhccc-----cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Confidence 876543211 1112344589999998653 2456789999999999999999887742210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 284 (286)
T cd07846 217 LGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHE 284 (286)
T ss_pred hCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCC
Confidence 00124566788999999999999999999999997
No 156
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=2.4e-30 Score=270.43 Aligned_cols=237 Identities=21% Similarity=0.230 Sum_probs=191.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||.+..+.+++.|+||.+............+.+|+++|+.++||||+++++.++.+
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (256)
T cd08220 1 KYEKIRVVGRGAFG--IVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED------- 71 (256)
T ss_pred CceEEEEecccCce--EEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-------
Confidence 589999999997 6 899999999999999999987654545567889999999999999999999998753
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++....... .....+..++.|++.+|.|||+ ++++|+||+|+||+++.++ .+||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 72 -KALMIVMEYAPGGTLAEYIQKRCNSL-LDEDTILHFFVQILLALHHVHT-KLILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred -CEEEEEEecCCCCCHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 4899999999 47999987653221 2334455668999999999995 9999999999999998654 579999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+........ .....+...|+|||.+.+ ..++.++|+||||+++|+|++|..+|......
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~ 215 (256)
T cd08220 149 SKILSSKSK-------AYTVVGTPCYISPELCEG------KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS 215 (256)
T ss_pred ceecCCCcc-------ccccccCCcccCchhccC------CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh
Confidence 987654211 111234458999999876 35667899999999999999999887643211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 216 GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 0123567789999999999999999999999998
No 157
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=1.6e-30 Score=276.73 Aligned_cols=241 Identities=17% Similarity=0.235 Sum_probs=187.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.+|++.+.||.|+ | .||.|.....+ ..|++|.+.... .......+.+|++.++.++||||+++++++..+
T Consensus 5 ~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~- 80 (283)
T cd05048 5 SAVRFLEELGEGAFG--KVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE- 80 (283)
T ss_pred HHcchhhcccCccCC--cEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC-
Confidence 3699999999998 8 89999976555 679999987543 233456788999999999999999999998763
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
..+|++|||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||
T Consensus 81 -------~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp 152 (283)
T cd05048 81 -------QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAA 152 (283)
T ss_pred -------CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccccc
Confidence 3789999999 5799998765321 112234466779999999999995 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
+||+++.++.+||+|||++......... ........+..|+|||.+.+. .++.++|+|||||++|||++
T Consensus 153 ~Nil~~~~~~~~L~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~sDv~slG~il~el~~~ 222 (283)
T cd05048 153 RNCLVGEGLTVKISDFGLSRDIYSADYY----RVQSKSLLPVRWMPPEAILYG------KFTTESDIWSFGVVLWEIFSY 222 (283)
T ss_pred ceEEEcCCCcEEECCCcceeeccccccc----cccCCCcccccccCHHHhccC------cCchhhhHHHHHHHHHHHHcC
Confidence 9999999999999999998765432110 001112334579999988653 56778999999999999997
Q ss_pred CCCCCChh---hh----hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 237 GMRLSKTE---EL----RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 237 g~~p~~~~---~l----~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|..||... .+ .. ...+|..+.+++.+||+.+|.+||++.+++++-
T Consensus 223 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l 280 (283)
T cd05048 223 GLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL 280 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 87776431 11 10 134677899999999999999999999998763
No 158
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=2.1e-30 Score=271.92 Aligned_cols=240 Identities=18% Similarity=0.220 Sum_probs=189.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.++.|. | .||.|.++.+++.++||++...... ....+.+|+.++++++||||+++++.+...
T Consensus 2 ~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----- 72 (262)
T cd06613 2 QEDYELIQRIGSGTYG--DVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRR----- 72 (262)
T ss_pred ccceEEEEEecCCCce--EEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeC-----
Confidence 46799999999987 6 9999999999999999999865332 456789999999999999999999998763
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|++|||+ +.|.+++..... ......+..++.|++.||.|||+ .+++|+||+|+||+++.+|.+||+|||
T Consensus 73 ---~~~~l~~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~g 146 (262)
T cd06613 73 ---DKLWIVMEYCGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHE-TGKIHRDIKGANILLTEDGDVKLADFG 146 (262)
T ss_pred ---CEEEEEEeCCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh-CCceecCCChhhEEECCCCCEEECccc
Confidence 3899999999 368888876421 12244466779999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L---- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l---- 246 (778)
++..+....... ........|++||.+.+... ..++.++|+|||||++|+|++|.+|+.... .
T Consensus 147 ~~~~~~~~~~~~------~~~~~~~~y~~Pe~~~~~~~---~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~ 217 (262)
T cd06613 147 VSAQLTATIAKR------KSFIGTPYWMAPEVAAVERK---GGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS 217 (262)
T ss_pred cchhhhhhhhcc------ccccCCccccCchhhccccc---CCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 987665321100 11123447999999765210 246678999999999999999998874321 0
Q ss_pred -h--------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -R--------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~--------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++++||..+|..||++.+++.|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 261 (262)
T cd06613 218 KSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261 (262)
T ss_pred hccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 0 0123456688999999999999999999999986
No 159
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=2.5e-30 Score=274.64 Aligned_cols=236 Identities=17% Similarity=0.211 Sum_probs=184.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+++|.|. | .||+|+++.++..|+||.+.......... ...+|+..++++. ||||+++++++++..
T Consensus 1 y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~------ 71 (282)
T cd07831 1 YKILGKIGEGTFS--EVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRK------ 71 (282)
T ss_pred CceEeeccccccc--eEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCC------
Confidence 78889999988 7 89999999999999999987643322222 3447888898886 999999999998643
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...+|+||||+ ++|.+.+..... ......+..++.||+.||.|||+ .+++||||+|+||+++. |.+||+|||++.
T Consensus 72 ~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 72 TGRLALVFELMDMNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMHR-NGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred CCcEEEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 24899999999 678877765431 22344566779999999999995 89999999999999999 999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ .....+..|+|||++.++ ..++.++|+|||||++|||++|.+||......
T Consensus 148 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~ 215 (282)
T cd07831 148 GIYSKPPY-------TEYISTRWYRAPECLLTD-----GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVL 215 (282)
T ss_pred ccccCCCc-------CCCCCCcccCChhHhhcC-----CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHc
Confidence 76542111 112344589999976542 34567899999999999999998888532100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||+.+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~ 280 (282)
T cd07831 216 GTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP 280 (282)
T ss_pred CCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCC
Confidence 0124567888999999999999999999999998
No 160
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=2.3e-30 Score=273.46 Aligned_cols=241 Identities=14% Similarity=0.176 Sum_probs=185.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.+|.|+ | .||+|.++.++..|++|.+...... ......+.+|+.+++.++||||++++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 77 (266)
T cd06651 2 INWRRGKLLGQGAFG--RVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA-- 77 (266)
T ss_pred CCccccceecCCCCE--EEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC--
Confidence 5799999999998 8 8999999999999999998754322 234567889999999999999999999987643
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|+++||+ ++|.+++...... ....+..++.||+.||.|||+ ++++||||+|+||+++.++.+||+|
T Consensus 78 ----~~~~~l~~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~qi~~~l~~LH~-~~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 78 ----EKTLTIFMEYMPGGSVKDQLKAYGAL---TESVTRKYTRQILEGMSYLHS-NMIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEcc
Confidence 24899999999 4799888765432 233345569999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||++..+........ . .........|+|||.+.+ ..++.++|+|||||++||+++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~ 220 (266)
T cd06651 150 FGASKRLQTICMSGT-G--IRSVTGTPYWMSPEVISG------EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK 220 (266)
T ss_pred CCCccccccccccCC-c--cccCCccccccCHHHhCC------CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence 999876543111000 0 011123458999999875 356778999999999999999999885321 111
Q ss_pred ------cCC----CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TAS----IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~----iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... +++.+..++ +||..+|.+||++.++++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp 262 (266)
T cd06651 221 IATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHP 262 (266)
T ss_pred HhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCc
Confidence 112 233455555 57778999999999999998
No 161
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=2.7e-30 Score=276.47 Aligned_cols=238 Identities=16% Similarity=0.222 Sum_probs=185.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.+.+.||.|. | .||.|+++.+|+.|+||.+..+... .....+.+|+..|+.++||||++++++++.+
T Consensus 5 ~~y~~~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------ 75 (291)
T cd07870 5 TSYLNLEKLGEGSYA--TVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTK------ 75 (291)
T ss_pred ceeEEEEEEEecCCE--EEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecC------
Confidence 4699999999998 8 8999999999999999999764322 2233567899999999999999999999863
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++|+||||+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 150 (291)
T cd07870 76 --ETLTFVFEYMHTDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHG-QHILHRDLKPQNLLISYLGELKLADFGLA 150 (291)
T ss_pred --CeEEEEEecccCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEEcCCCcEEEeccccc
Confidence 3899999999 567766654321 12234466678999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----hh----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR---- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l~---- 247 (778)
+........ ......+..|+|||++.+. ..++.++|+|||||++|+|++|..+|.... +.
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 219 (291)
T cd07870 151 RAKSIPSQT------YSSEVVTLWYRPPDVLLGA-----TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT 219 (291)
T ss_pred cccCCCCCC------CCCccccccccCCceeecC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHH
Confidence 765432111 1112335589999998652 245668999999999999999998875211 00
Q ss_pred --------------cc----------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------NT----------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------~~----------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+..+.+++.+|+..||.+|||+.+++.|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~ 289 (291)
T cd07870 220 VLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHP 289 (291)
T ss_pred HcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCC
Confidence 00 01134567889999999999999999999998
No 162
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=2e-30 Score=276.21 Aligned_cols=239 Identities=20% Similarity=0.303 Sum_probs=189.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||+|+++.+++.|+||++..........+.+.+|+++++.++||||+++++.+...
T Consensus 2 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 72 (288)
T cd07833 2 KYEVLGVVGEGAYG--VVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK------- 72 (288)
T ss_pred ceeEEEEecccCCe--eEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC-------
Confidence 599999999998 8 899999999999999999986544445567789999999999999999999999863
Q ss_pred ccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+|+||+. .+...+.... .......+.+++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++.
T Consensus 73 -~~~~iv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~ 148 (288)
T cd07833 73 -GRLYLVFEYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHS-HNIIHRDIKPENILVSESGVLKLCDFGFAR 148 (288)
T ss_pred -CEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEEeeeccc
Confidence 38999999994 4444433322 113345577789999999999995 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ . .........|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 149 ~~~~~~~~---~--~~~~~~~~~~~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 218 (288)
T cd07833 149 ALRARPAS---P--LTDYVATRWYRAPELLVGD-----TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCL 218 (288)
T ss_pred ccCCCccc---c--ccCcccccCCcCCchhcCC-----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 77653210 1 1112334579999998763 25678999999999999999999877421000
Q ss_pred -----------------------c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++++||..+|.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 286 (288)
T cd07833 219 GPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286 (288)
T ss_pred CCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCC
Confidence 0 012367788999999999999999999999997
No 163
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=2.5e-30 Score=278.52 Aligned_cols=236 Identities=17% Similarity=0.235 Sum_probs=191.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | .||+|+++.+|+.|+||.+...... ..+.+.+|+..++.++||||+++++.++..
T Consensus 17 ~~~~y~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 88 (297)
T cd06656 17 PKKKYTRFEKIGQGASG--TVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 88 (297)
T ss_pred hhhhceeeeeeccCCCe--EEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 456899999999998 8 8999999999999999999764332 345688999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.++|+||||+ ++|.+++.+... ....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~l~~~L~~LH~-~~i~H~dL~p~Nili~~~~~~~l~Df 159 (297)
T cd06656 89 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 159 (297)
T ss_pred ----CEEEEeecccCCCCHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEECcC
Confidence 4899999999 468888865432 234456679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-h-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-R----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-~----- 247 (778)
|++......... .........|++||.+.+ ..++.++|+|||||++|++++|..||..... .
T Consensus 160 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~ 227 (297)
T cd06656 160 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (297)
T ss_pred ccceEccCCccC------cCcccCCccccCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee
Confidence 998766432111 111233457999999876 3566789999999999999999988854321 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 228 ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1123556678899999999999999999999998
No 164
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=8.8e-31 Score=284.94 Aligned_cols=230 Identities=15% Similarity=0.177 Sum_probs=178.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhc-CCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~-LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++..... .+........|..+++. ++||||+++++.+++. ..+
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--------~~~ 71 (316)
T cd05619 2 MLGKGSFG--KVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--------ENL 71 (316)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--------CEE
Confidence 578887 8 999999999999999999986421 11233455667777775 5899999999999874 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~ey~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~al~~LH~-~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 147 (316)
T cd05619 72 FFVMEYLNGGDLMFHIQSCHKF---DLPRATFYAAEIICGLQFLHS-KGIVYRDLKLDNILLDTDGHIKIADFGMCKENM 147 (316)
T ss_pred EEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCCCEEEccCCcceECC
Confidence 9999999 5799888764322 233355669999999999995 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------c---
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--------T--- 249 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--------~--- 249 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||....... .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~ 215 (316)
T cd05619 148 LGDA------KTCTFCGTPDYIAPEILLG------QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCY 215 (316)
T ss_pred CCCC------ceeeecCCccccCHHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 2111 0112234568999999876 356789999999999999999999885432111 0
Q ss_pred -CCCCcchHHHHHHHhccCCCCCCChH-HHHhcc
Q 004025 250 -ASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENS 281 (778)
Q Consensus 250 -~~iP~~L~~~i~~lL~~dP~~Rps~~-~lL~~~ 281 (778)
..++..+.+++.+||..+|.+|+++. ++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~ 249 (316)
T cd05619 216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQHP 249 (316)
T ss_pred CccCCHHHHHHHHHHhccCHhhcCCChHHHHcCc
Confidence 12455678899999999999999996 888887
No 165
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=4.8e-30 Score=274.91 Aligned_cols=243 Identities=16% Similarity=0.195 Sum_probs=189.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+...|++.+++|.|+ | .||+|+++.++..|++|.+.... ....+.+.+|++.++.++||||+++++.+..+
T Consensus 10 ~~~~y~i~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 81 (292)
T cd06644 10 PNEVWEIIGELGDGAFG--KVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWD---- 81 (292)
T ss_pred cchhhhhhheecCCCCe--EEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----
Confidence 445699999999998 7 89999999999999999997642 33456788899999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ +.|..++.+... ......+..++.||+.+|.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 82 ----~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 82 ----GKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHS-MKIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred ----CeEEEEEecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhc-CCeeecCCCcceEEEcCCCCEEEccC
Confidence 3899999999 457776654332 12344566679999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++........ ..........|++||++.+.... ...++.++|+|||||++|||++|.+|+.....
T Consensus 155 g~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 227 (292)
T cd06644 155 GVSAKNVKTLQ------RRDSFIGTPYWMAPEVVMCETMK-DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 227 (292)
T ss_pred ccceecccccc------ccceecCCccccCceeecccccc-CCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 98865433110 01122344589999998542100 12356789999999999999999988754211
Q ss_pred h--------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R--------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~--------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....++..+.+++++||..+|.+||++.++++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 270 (292)
T cd06644 228 AKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHP 270 (292)
T ss_pred hcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0 0123445678899999999999999999999998
No 166
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.4e-30 Score=296.47 Aligned_cols=234 Identities=17% Similarity=0.153 Sum_probs=182.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+.|.+.+.||.|+ | .||+|+++.+++.|+||.... ....+|+++|++|+||||+++++++..+
T Consensus 167 ~~~gy~i~~~Lg~G~~G--~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~---- 232 (461)
T PHA03211 167 AGLGFAIHRALTPGSEG--CVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVG---- 232 (461)
T ss_pred ccCCeEEEEEEccCCCe--EEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEEC----
Confidence 356899999999998 8 899999999999999996432 2356899999999999999999998764
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...|+|+|++ ++|..++..... ......+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 233 ----~~~~lv~e~~~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDLKP~NILl~~~~~vkL~DFG 305 (461)
T PHA03211 233 ----GLTCLVLPKYRSDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHG-EGIIHRDIKTENVLVNGPEDICLGDFG 305 (461)
T ss_pred ----CEEEEEEEccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEEECcCCHHHEEECCCCCEEEcccC
Confidence 3789999998 678888765432 12344566779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC-CCCh----------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKT---------- 243 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~-p~~~---------- 243 (778)
+++.+...... .......++..|++||++.+ ..++.++|+|||||++|||++|.. +|..
T Consensus 306 la~~~~~~~~~----~~~~~~~GT~~Y~APE~~~~------~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~ 375 (461)
T PHA03211 306 AACFARGSWST----PFHYGIAGTVDTNAPEVLAG------DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYD 375 (461)
T ss_pred Cceeccccccc----ccccccCCCcCCcCHHHHcC------CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcH
Confidence 98876432111 01122345568999999876 356789999999999999988753 2211
Q ss_pred hhhhc-------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 244 EELRN-------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 244 ~~l~~-------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.++.. ...+...+.+++++||+.||.+||++.++|+|
T Consensus 376 ~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000 00223356778999999999999999999999
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 456 p 456 (461)
T PHA03211 456 P 456 (461)
T ss_pred c
Confidence 8
No 167
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=9.9e-32 Score=289.56 Aligned_cols=237 Identities=20% Similarity=0.314 Sum_probs=195.5
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
+.+|+|. | +||-|+++.+|+.||||++++-.........+++|+.+|..++||+|+.+...||+ +..+|
T Consensus 570 evLGSGQFG--~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET--------~ervF 639 (888)
T KOG4236|consen 570 EVLGSGQFG--TVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET--------PERVF 639 (888)
T ss_pred hhccCCcce--eeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC--------CceEE
Confidence 5678888 8 99999999999999999999876555566889999999999999999999999997 45899
Q ss_pred EEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC---cEEEEeccccccc
Q 004025 104 IVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWKLHAFDVLSEF 179 (778)
Q Consensus 104 IVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g---~~KL~dFgla~~~ 179 (778)
+|||.+ ++..+.|-... .+...+..-+..+.||+.||.||| ..+|+|+||||+||++.... .+||||||+++.+
T Consensus 640 VVMEKl~GDMLEMILSsE-kgRL~er~TkFlvtQIL~ALr~LH-~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI 717 (888)
T KOG4236|consen 640 VVMEKLHGDMLEMILSSE-KGRLPERITKFLVTQILVALRYLH-FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII 717 (888)
T ss_pred EEehhhcchHHHHHHHhh-cccchHHHHHHHHHHHHHHHHHhh-hcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence 999999 77555443322 122334455666999999999999 59999999999999998654 5999999999998
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hhhcc-----
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRNT----- 249 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l~~~----- 249 (778)
.+... +..-++++.|.|||++.+ ++|..+.||||.|++||--++|..||+.+ ++++-
T Consensus 718 gEksF-------RrsVVGTPAYLaPEVLrn------kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyP 784 (888)
T KOG4236|consen 718 GEKSF-------RRSVVGTPAYLAPEVLRN------KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYP 784 (888)
T ss_pred chhhh-------hhhhcCCccccCHHHHhh------ccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccC
Confidence 76421 223356679999999987 68889999999999999999999888642 33331
Q ss_pred ----CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 250 ----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 250 ----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
..|.....+++..||+..-.+|.++++.+.|+ |+++|
T Consensus 785 p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~----Wlq~y 825 (888)
T KOG4236|consen 785 PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHP----WLQDY 825 (888)
T ss_pred CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccch----hhhcc
Confidence 35667788999999999999999999999999 88765
No 168
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.6e-30 Score=280.05 Aligned_cols=254 Identities=19% Similarity=0.324 Sum_probs=191.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | .||+|+++.+++.|+||++......+.....+.+|++.++.++||||+++++.+.......+
T Consensus 7 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFG--EVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCE--EEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 46799999999998 7 89999999999999999997654444334457789999999999999999998865432211
Q ss_pred CcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.....+|+|+||+. +|...+..... ......+..++.||++||.|||+ .+++|+||+|+||+++.+|.+||+|||+
T Consensus 85 ~~~~~~~lv~~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~l~~al~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 85 RKRGSVYMVTPYMDHDLSGLLENPSV--KLTESQIKCYMLQLLEGINYLHE-NHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred ccCceEEEEEecCCcCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 22457899999994 57666654321 23445577789999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC----Cccc-cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---
Q 004025 176 LSEFDGNNEAANG----PMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~----~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--- 247 (778)
+............ .... ....+...|+|||++.+. ..++.++|+|||||++|||++|.++|......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-----RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCC-----CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9866543211110 0000 111234479999987653 34677899999999999999999887532100
Q ss_pred ---------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+...+.+++.+||..+|.+||++.+++.|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~ 309 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP 309 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCC
Confidence 0012334577899999999999999999999997
No 169
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=2.2e-30 Score=278.81 Aligned_cols=236 Identities=17% Similarity=0.224 Sum_probs=190.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.+|.|. | .||+|+++.++..|+||.+...... ..+.+.+|+.+++.++||||+++++.+...
T Consensus 18 ~~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~---- 89 (296)
T cd06654 18 PKKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 89 (296)
T ss_pred cccceeeEEEecCCCCe--EEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeC----
Confidence 456899999999998 7 8999999999999999999865433 245688999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+.|+||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 90 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~i~~ql~~aL~~LH~-~gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 90 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred ----CEEEEeecccCCCCHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCCEEECcc
Confidence 4899999999 469888865432 233345568999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++......... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|..||......
T Consensus 161 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~ 228 (296)
T cd06654 161 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (296)
T ss_pred ccchhccccccc------cCcccCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH
Confidence 998765432110 011134458999999875 34567999999999999999999988543210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|..||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhCh
Confidence 1123556688899999999999999999999998
No 170
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=2.3e-30 Score=272.79 Aligned_cols=240 Identities=17% Similarity=0.274 Sum_probs=189.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+|++++.+|.|. | .||.|+.+.+++.|+||++...... ....+.+++|++.|++++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 75 (268)
T cd06630 1 EWLKGQQLGTGAFS--SCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED--- 75 (268)
T ss_pred CccccceecCcCce--EEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC---
Confidence 589999999998 8 8999999999999999999754321 13467789999999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~ 171 (778)
..+|+|+||+ ++|.+++++... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+| .+||+
T Consensus 76 -----~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~al~~LH~-~~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 -----SHFNLFVEWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLHE-NQIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred -----CeEEEEEeccCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEc
Confidence 4899999999 479998876542 2234456669999999999995 8999999999999998776 59999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||++........... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 147 dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~ 218 (268)
T cd06630 147 DFGAAARLAAKGTGAG--EFQGQLLGTIAFMAPEVLRG------EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA 218 (268)
T ss_pred ccccccccccccccCC--ccccccccccceeCHhHhcc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH
Confidence 9999877754311110 01111234458999999865 356678999999999999999998875332110
Q ss_pred ----------cC----CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TA----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~----~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. .++..+.+++.+||..+|..||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~ 265 (268)
T cd06630 219 LIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHP 265 (268)
T ss_pred HHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCc
Confidence 11 2455677889999999999999999999998
No 171
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=8.9e-31 Score=274.83 Aligned_cols=235 Identities=15% Similarity=0.236 Sum_probs=191.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|+ | .||.|+++.+++.|+||++.+..... ...+.+.+|++++++++||||+++++.++..
T Consensus 1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 72 (258)
T cd05578 1 HFELLRVIGKGAFG--KVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE------ 72 (258)
T ss_pred CceEEEEeccCCCc--eEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC------
Confidence 489999999998 7 89999999999999999998654332 4567889999999999999999999999763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+|+||+ ++|..++..... .....+..++.||++||.|||+ .+++|+||+|+||+++++|.++|+|||+
T Consensus 73 --~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 73 --ENMYLVVDLLLGGDLRYHLSQKVK---FSEEQVKFWICEIVLALEYLHS-KGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred --CeEEEEEeCCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 4899999999 579999877521 2234456679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------h--
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------R-- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------~-- 247 (778)
+........ .....+...|++||.+.+. .++.++|+|||||++|+|++|..|+..... .
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 213 (258)
T cd05578 147 ATKVTPDTL-------TTSTSGTPGYMAPEVLCRQ------GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK 213 (258)
T ss_pred ccccCCCcc-------ccccCCChhhcCHHHHccc------CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH
Confidence 887654211 1112234479999998763 467899999999999999999988764321 1
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCCh--HHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNS--SKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~--~~lL~~~ 281 (778)
....+|..+.+++.+||..+|.+|++. .++++|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~ 256 (258)
T cd05578 214 QETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHP 256 (258)
T ss_pred hccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCC
Confidence 113467788899999999999999999 9999997
No 172
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.9e-31 Score=272.88 Aligned_cols=244 Identities=19% Similarity=0.269 Sum_probs=195.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+.|++..+||.|. | .||+|..+.++. .+|||.|+...........+-+|+..+|.|+||||+.++.+|.+.
T Consensus 24 ~~ye~ig~Ig~GTYG--~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYG--KVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-- 99 (438)
T ss_pred HHhhccceecccccc--eeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc--
Confidence 5799999999999 9 999998776654 789999997766666667789999999999999999999999764
Q ss_pred ccCCcccEEEEEecCCc-ChHHHHHHhCc--CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC----C
Q 004025 94 DATSTKITIYIVTEPVM-PLSEKIKELGL--EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----L 166 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~-~L~~~L~~~~~--~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~----g 166 (778)
...+++++||.+ +|...|+-... ........++.+++||+.|+.|||+ +-++||||||.||+|..+ |
T Consensus 100 -----d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 100 -----DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-NWVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred -----CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh-hheeeccCCcceEEEeccCCccC
Confidence 248999999995 79998876542 2223345678889999999999996 889999999999999877 9
Q ss_pred cEEEEecccccccCCCCCCCCCCccccc-cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE- 244 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~- 244 (778)
.+||+|||+++.+.+.- .++.... -+++..|+|||++.+. ..|+.++|+|+.||++.||++-.|+|.+.
T Consensus 174 ~VKIaDlGlaR~~~~pl----kpl~s~d~VVVTiWYRAPELLLGa-----~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPL----KPLASLDPVVVTIWYRAPELLLGA-----RHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred eeEeecccHHHHhhccc----cccccCCceEEEEEecChHHhccc-----ccccchhhhHHHHHHHHHHHccCccccchh
Confidence 99999999999887631 1222222 2445599999999986 78999999999999999999988776432
Q ss_pred ------------hhhcc---------------CCC------------------------------CcchHHHHHHHhccC
Q 004025 245 ------------ELRNT---------------ASI------------------------------PKSLLPDYQRLLSSM 267 (778)
Q Consensus 245 ------------~l~~~---------------~~i------------------------------P~~L~~~i~~lL~~d 267 (778)
++..+ .++ +++...++.+||+.|
T Consensus 245 ~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yD 324 (438)
T KOG0666|consen 245 EKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYD 324 (438)
T ss_pred hhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccC
Confidence 22111 111 223566788999999
Q ss_pred CCCCCChHHHHhcc
Q 004025 268 PSRRLNSSKLIENS 281 (778)
Q Consensus 268 P~~Rps~~~lL~~~ 281 (778)
|.+|+++.+.++|.
T Consensus 325 P~kRIta~qAleh~ 338 (438)
T KOG0666|consen 325 PIKRITAEQALEHP 338 (438)
T ss_pred chhhccHHHHhccc
Confidence 99999999999997
No 173
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=1e-30 Score=274.91 Aligned_cols=235 Identities=17% Similarity=0.180 Sum_probs=190.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|. | .||++.++.+++.|+||.+...... .....+.+|+++++.++||||+++++.+..+
T Consensus 2 ~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (265)
T cd06605 2 DLEYLGELGAGNSG--VVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNN------- 71 (265)
T ss_pred cchHHHHhcCCCCe--EEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecC-------
Confidence 588889999998 7 8999999999999999999875433 3456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+++||+ ++|.+++.... .......+..++.||+.||.|||+..+++|+||+|+||+++.+|.+||+|||.+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 72 -GDISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred -CEEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 3899999999 47999887653 122344566679999999999995489999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh---------hhh
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE---------ELR 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~---------~l~ 247 (778)
........ . .......|+|||.+.+ ..++.++|+|||||++|+|++|..|+... .+.
T Consensus 149 ~~~~~~~~-------~-~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (265)
T cd06605 149 GQLVNSLA-------K-TFVGTSSYMAPERIQG------NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ 214 (265)
T ss_pred hhhHHHHh-------h-cccCChhccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence 76643210 0 1234458999999876 35678999999999999999999887432 111
Q ss_pred c-----cCC-----CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----TAS-----IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----~~~-----iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ... ++..+.+++.+||..+|.+||++.+++.|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 258 (265)
T cd06605 215 YIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHP 258 (265)
T ss_pred HHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCc
Confidence 0 011 566688999999999999999999999998
No 174
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=4.5e-30 Score=273.52 Aligned_cols=229 Identities=16% Similarity=0.147 Sum_probs=184.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||+|++..++..|+||++..... ......+.+|+++|++++||||+++++.++.+
T Consensus 2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 71 (279)
T cd06619 2 DIQYQEILGHGNGG--TVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVE------- 71 (279)
T ss_pred cchheeeeccCCCe--EEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-------
Confidence 588889999998 7 899999999999999999976432 23445688999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...|+||||+ +.|..+. . .....+..++.||+.||.|||+ .+++|+||||+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~-~------~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 72 -NRISICTEFMDGGSLDVYR-K------IPEHVLGRIAVAVVKGLTYLWS-LKILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred -CEEEEEEecCCCCChHHhh-c------CCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 3889999999 3454331 1 1234456679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----------h
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------L 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----------l 246 (778)
....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... .
T Consensus 143 ~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 208 (279)
T cd06619 143 TQLVNSI--------AKTYVGTNAYMAPERISG------EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL 208 (279)
T ss_pred eeccccc--------ccCCCCChhhcCceeecC------CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence 7664321 111234558999999876 356789999999999999999998874311 0
Q ss_pred -hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||..+|.+||++.++++|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 209 LQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred HHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 00 123456688999999999999999999999998
No 175
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=2.7e-30 Score=270.69 Aligned_cols=236 Identities=19% Similarity=0.254 Sum_probs=188.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||.++++.++..|++|.+..... ....+.+.+|+.+++.++||||+++++.++.+
T Consensus 1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 70 (255)
T cd08219 1 QYNVLRVVGEGSFG--RALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD------- 70 (255)
T ss_pred CceEEEEeeccCCe--EEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC-------
Confidence 589999999998 7 899999999999999999975432 23456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||++
T Consensus 71 -~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dl~p~nili~~~~~~~l~dfg~~ 147 (255)
T cd08219 71 -GHLYIVMEYCDGGDLMQKIKLQRGK-LFPEDTILQWFVQMCLGVQHIHE-KRVLHRDIKSKNIFLTQNGKVKLGDFGSA 147 (255)
T ss_pred -CEEEEEEeeCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEECCCCcEEEcccCcc
Confidence 4899999999 4788887653321 12344456668999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....+...|+|||++.+ ..++.++|+||||+++|+|++|..||.......
T Consensus 148 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 215 (255)
T cd08219 148 RLLTSPGAY------ACTYVGTPYYVPPEIWEN------MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG 215 (255)
T ss_pred eeecccccc------cccccCCccccCHHHHcc------CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC
Confidence 766542111 112234557999999876 356778999999999999999999886433211
Q ss_pred -c----CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ..++..+.+++.+||+.+|.+||++.+++..
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 216 SYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1 2345567889999999999999999999865
No 176
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=2.1e-30 Score=278.42 Aligned_cols=249 Identities=18% Similarity=0.276 Sum_probs=191.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc--
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID-- 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~-- 94 (778)
...|++.+.+|.|. | +||+|+++.+|+.|+||.+......+.....+.+|++.+++++||||+++++.+.++...
T Consensus 6 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYG--QVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCE--EEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45799999999987 7 999999999999999999986544334445678899999999999999999998754200
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
-......+|+|+||+ +.|...+.... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHK-KNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCcEEeCcc
Confidence 000123799999999 45766665432 122344566779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++......... + .........|++||++.+. ...+.++|+|||||++|+|++|.++|.....
T Consensus 161 g~~~~~~~~~~~---~--~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~ 230 (302)
T cd07864 161 GLARLYNSEESR---P--YTNKVITLWYRPPELLLGE-----ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELI 230 (302)
T ss_pred cccccccCCccc---c--cccceeccCccChHHhcCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999876543210 0 0111234479999987642 2356789999999999999999988753210
Q ss_pred -----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..+|.+||++.+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 300 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSP 300 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 00124678899999999999999999999999997
No 177
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=1.4e-30 Score=284.62 Aligned_cols=230 Identities=15% Similarity=0.196 Sum_probs=181.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||.|+++.+++.|+||++.+.... +.....+.+|+.+++++ +||||++++++++.. ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--------~~~ 71 (327)
T cd05617 2 VIGRGSYA--KVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--------SRL 71 (327)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--------CEE
Confidence 578887 7 9999999999999999999864322 23456688999999888 599999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 72 FLVIEYVNGGDLMFHMQRQRK---LPEEHARFYAAEICIALNFLHE-RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL 147 (327)
T ss_pred EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEeCCCCEEEeccccceecc
Confidence 9999999 478888866432 2344566779999999999996 899999999999999999999999999987533
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----------hh----
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----------EL---- 246 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----------~l---- 246 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||... .+
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 215 (327)
T cd05617 148 GPGD------TTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI 215 (327)
T ss_pred CCCC------ceecccCCcccCCHHHHCC------CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH
Confidence 2111 0112345568999999876 35678999999999999999999998421 00
Q ss_pred -hcc----CCCCcchHHHHHHHhccCCCCCCCh------HHHHhcc
Q 004025 247 -RNT----ASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENS 281 (778)
Q Consensus 247 -~~~----~~iP~~L~~~i~~lL~~dP~~Rps~------~~lL~~~ 281 (778)
... ..++..+..++++||+.||.+|+++ .++++|+
T Consensus 216 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 216 LEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 011 2345567889999999999999984 6899997
No 178
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=3e-31 Score=289.94 Aligned_cols=230 Identities=17% Similarity=0.223 Sum_probs=177.3
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEecccccCCcccE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
||.|+ | +||+|+++.+|+.|+||++.+.... ........+|..++..+ +||||+++++.++.. ..
T Consensus 1 lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--------~~ 70 (330)
T cd05586 1 IGKGTFG--QVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--------SD 70 (330)
T ss_pred CCCCCce--EEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--------Ce
Confidence 56777 7 9999999999999999999753221 12233344566666655 699999999999874 48
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+||||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qil~al~~LH~-~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 71 LYLVTDYMSGGELFWHLQKEGR---FSEDRAKFYIAELVLALEHLHK-YDIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEEEcCCCCChHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999 478888876543 2344566679999999999995 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----c------
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----T------ 249 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~----~------ 249 (778)
..... ......++..|+|||++.+. ..++.++|+|||||++|+|++|..||....... +
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 215 (330)
T cd05586 147 LTDNK------TTNTFCGTTEYLAPEVLLDE-----KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR 215 (330)
T ss_pred CCCCC------CccCccCCccccCHHHHcCC-----CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC
Confidence 32111 01122455689999998653 346788999999999999999998885432211 1
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCC----ChHHHHhcc
Q 004025 250 ---ASIPKSLLPDYQRLLSSMPSRRL----NSSKLIENS 281 (778)
Q Consensus 250 ---~~iP~~L~~~i~~lL~~dP~~Rp----s~~~lL~~~ 281 (778)
..++..+.+++++||..+|.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~ 254 (330)
T cd05586 216 FPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHP 254 (330)
T ss_pred CCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCc
Confidence 13566788999999999999998 689999998
No 179
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=1.7e-30 Score=310.65 Aligned_cols=247 Identities=19% Similarity=0.185 Sum_probs=194.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
....+|++.+.||.|+ | +||.|+++.++..|++|++............+.+|+.+|+.|+||||+++++.|....
T Consensus 10 ~~l~~YeIl~kLG~GgFG--tVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~-- 85 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFG--EVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA-- 85 (1021)
T ss_pred cccCCEEEEEEEecCCCe--EEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC--
Confidence 3445899999999998 8 9999999999999999999876555555677899999999999999999999987543
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcC------CCccccccCCCCeEEcC-
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNND------CKLVHGNVCLSSVVVTQ- 164 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~------~~ivH~dLkp~NI~v~~- 164 (778)
...+||||||| ++|..+|..... ........+..++.||+.||.|||+. .+|||+||||+||||+.
T Consensus 86 ----~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~ 161 (1021)
T PTZ00266 86 ----NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG 161 (1021)
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecC
Confidence 34899999999 579998876422 12233445667799999999999962 24999999999999964
Q ss_pred ----------------CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHH
Q 004025 165 ----------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (778)
Q Consensus 165 ----------------~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG 228 (778)
.+.+||+|||++..+..... .....++..|+|||++.+.- ..++.++||||||
T Consensus 162 ~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-------~~s~vGTp~YmAPEvL~ge~----~~~s~KSDVWSLG 230 (1021)
T PTZ00266 162 IRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM-------AHSCVGTPYYWSPELLLHET----KSYDDKSDMWALG 230 (1021)
T ss_pred ccccccccccccccCCCCceEEccCCcccccccccc-------ccccCCCccccCHHHHhccC----CCCCchhHHHHHH
Confidence 34489999999987643211 11224556899999986421 2466789999999
Q ss_pred HHHHHHHhCCCCCChhh----h----hc-----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 229 CLIYELFSGMRLSKTEE----L----RN-----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 229 ~liyel~tg~~p~~~~~----l----~~-----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|+||||++|..||.... + .. ...++..+..++.+||..+|..||++.++|.++
T Consensus 231 ~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~ 296 (1021)
T PTZ00266 231 CIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQ 296 (1021)
T ss_pred HHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccH
Confidence 99999999999885321 1 11 123456789999999999999999999999987
No 180
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.97 E-value=2.6e-30 Score=272.54 Aligned_cols=238 Identities=16% Similarity=0.240 Sum_probs=187.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | .||+|..+.+++.|++|++.... .....+.+|++.++.++||||+++++.+..+
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 74 (263)
T cd05052 4 ERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE---- 74 (263)
T ss_pred chHHeEEeeecCCcccc--eEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCC----
Confidence 345699999999998 8 89999999999999999987432 2345688999999999999999999998764
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++...... ......+.+++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~df 148 (263)
T cd05052 75 ----PPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVADF 148 (263)
T ss_pred ----CCcEEEEEeCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCCcEEeCCC
Confidence 3789999998 5799988764322 22344566779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE------- 245 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~------- 245 (778)
|++.......... ......+..|++||.+.+ ..++.++|+|||||++|||++ |..|+....
T Consensus 149 ~~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~ 217 (263)
T cd05052 149 GLSRLMTGDTYTA-----HAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 217 (263)
T ss_pred ccccccccceeec-----cCCCCCccccCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9988765421100 011112347999998875 356678999999999999998 777774321
Q ss_pred hhc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 LRN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+.. ...+|..+.+++.+||..+|..||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 218 LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 111 13467789999999999999999999998764
No 181
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=3.1e-30 Score=271.93 Aligned_cols=239 Identities=18% Similarity=0.204 Sum_probs=187.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|. | .||+|+.+.+++.|+||.+..... .......+.+|++++++++||||+++++.+...
T Consensus 3 ~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (267)
T cd08228 3 NFQIEKKIGRGQFS--EVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED------ 74 (267)
T ss_pred ceeeeeeeccCCCe--eEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC------
Confidence 699999999998 8 899999999999999998875332 234455688999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+|+||+ ++|..++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 75 --NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCCHHHEEEcCCCCEEECccc
Confidence 3899999999 4788887653321 112334456669999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++......... .....+...|+|||.+.+ ...+.++|+|||||++|||++|+.|+.....
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08228 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK 219 (267)
T ss_pred cceeccchhHH------HhcCCCCccccChhhhcc------CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH
Confidence 98876542110 111233457999999875 3466789999999999999999988743211
Q ss_pred -hc--c-----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -RN--T-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~~--~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..++..+.+++.+||..+|.+||++.++++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~ 262 (267)
T cd08228 220 IEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIA 262 (267)
T ss_pred HhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHH
Confidence 00 0 13455688999999999999999999998753
No 182
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=3.9e-30 Score=269.04 Aligned_cols=232 Identities=19% Similarity=0.236 Sum_probs=179.0
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
+.||.|+ | +||+|+++.+++.|+||.+.... .......+.+|+++|++++||||+++++++... ..+|
T Consensus 1 ~~lg~g~~g--~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~ 69 (252)
T cd05084 1 ERIGRGNFG--EVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--------QPIY 69 (252)
T ss_pred CccCcccCc--cEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--------CCeE
Confidence 4678887 8 89999999999999999986543 233456788999999999999999999998764 3799
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 70 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 146 (252)
T cd05084 70 IVMELVQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLES-KHCIHRDLAARNCLVTEKNVLKISDFGMSREEED 146 (252)
T ss_pred EEEeeccCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEEcCCCcEEECccccCccccc
Confidence 999999 479888875432 12234456669999999999995 8999999999999999999999999999876543
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh---h-h---------
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---L-R--------- 247 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~---l-~--------- 247 (778)
....... .....+..|+|||.+.++ .++.++|+|||||++|||++ |..|+.... . .
T Consensus 147 ~~~~~~~----~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (252)
T cd05084 147 GVYASTG----GMKQIPVKWTAPEALNYG------RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLP 216 (252)
T ss_pred ccccccC----CCCCCceeecCchhhcCC------CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC
Confidence 2100000 000112369999998763 46778999999999999997 777664211 1 0
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++++||..+|.+||++.++++.
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 249 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQE 249 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012456778899999999999999999998753
No 183
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=1.4e-30 Score=284.10 Aligned_cols=236 Identities=18% Similarity=0.224 Sum_probs=184.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~ 96 (778)
.|++.+.||.|+ | +||+|.++.+|+.||||++.+... .+...+.+..|.++++.+. ||+|++++++++++
T Consensus 1 ~f~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (323)
T cd05615 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV----- 73 (323)
T ss_pred CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-----
Confidence 478889999998 8 999999999999999999985422 1233456778888888886 56788899988764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~Ey~~~g~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~-~~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 74 ---DRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISVGLFFLHR-RGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEEeccc
Confidence 3899999999 579888876543 2234456669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c--
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N-- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~-- 248 (778)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~ 214 (323)
T cd05615 147 MCKEHMVDGV------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 214 (323)
T ss_pred cccccCCCCc------cccCccCCccccCHHHHcC------CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9876433211 1112234568999999876 35678999999999999999999998643211 1
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+|++. .++++|+
T Consensus 215 ~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~ 258 (323)
T cd05615 215 EHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHA 258 (323)
T ss_pred hCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCc
Confidence 12456667888999999999999974 6788887
No 184
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.7e-30 Score=300.05 Aligned_cols=257 Identities=16% Similarity=0.218 Sum_probs=185.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC-cEEEEEEe--------------CC-CCchhHHHHHHHHHHHHhcCCCCCe
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS-PVSIFSIS--------------GT-NAQDGHLAAARNGVKRLRTVRHPNI 81 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~-~VaIK~~~--------------~~-~~~~~~~~~~~~ev~~Lk~LrHPnI 81 (778)
..|++.++||.|+ | +||.|..+.... .+++|.+. +. .........+.+|+.+|++|+||||
T Consensus 148 ~~Y~ii~~LG~G~fG--~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 148 AHFRVIDDLPAGAFG--KIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hccEEEeEecCCCCc--ceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4699999999998 8 899987654322 22222111 11 0111234567899999999999999
Q ss_pred eeEeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCC--CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 82 LAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEG--SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 82 lk~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~--~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
++++++++.+ ...|+|+|++ ..|..++....... ......+..++.||+.||.|||+ .+|+||||||+
T Consensus 226 v~l~~~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~ 296 (501)
T PHA03210 226 LKIEEILRSE--------ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-KKLIHRDIKLE 296 (501)
T ss_pred CcEeEEEEEC--------CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHH
Confidence 9999999874 3789999999 56877776543211 11123344569999999999995 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~ 238 (778)
|||++.+|.+||+|||++..+..... ...+.+.++..|++||++.+ ..++.++|+|||||++|||++|.
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~~~ 365 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKERE-----AFDYGWVGTVATNSPEILAG------DGYCEITDIWSCGLILLDMLSHD 365 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCcccc-----cccccccCCcCCCCchhhcC------CCCCcHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999987754211 11223456679999999876 35778999999999999999986
Q ss_pred CC-CCh------hhhhc----------------------------------------cCCCCcchHHHHHHHhccCCCCC
Q 004025 239 RL-SKT------EELRN----------------------------------------TASIPKSLLPDYQRLLSSMPSRR 271 (778)
Q Consensus 239 ~p-~~~------~~l~~----------------------------------------~~~iP~~L~~~i~~lL~~dP~~R 271 (778)
.+ +.. .++.. ...+|..+.+++.+||+.||++|
T Consensus 366 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~R 445 (501)
T PHA03210 366 FCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLR 445 (501)
T ss_pred CCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccC
Confidence 43 211 00000 01244455666889999999999
Q ss_pred CChHHHHhcccCCccccccccchhhhhhHHhhhc
Q 004025 272 LNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEIL 305 (778)
Q Consensus 272 ps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l 305 (778)
|++.++|.|+ ||.....+.+.++..+
T Consensus 446 psa~elL~hp--------~f~~~~~~~~~~~~~~ 471 (501)
T PHA03210 446 PGAAELLALP--------LFSAEEEEEILFIHGL 471 (501)
T ss_pred cCHHHHhhCh--------hhhcCCchHHHHHHhh
Confidence 9999999997 7776555555554443
No 185
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=5.1e-30 Score=270.34 Aligned_cols=250 Identities=18% Similarity=0.223 Sum_probs=192.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.++.|. | +||.|+++.+++.|++|++..... ..+.+.+|+..++++ .||||+++++.+......
T Consensus 4 ~~~~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 4 PTGIFELVEVIGEGTYG--KVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred chhheeheeeecCCCCe--EEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 346799999999997 7 899999999999999999986432 245688999999999 699999999999764310
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhC-cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.....+|+||||+ ++|.+++.... .........+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+
T Consensus 79 --~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 79 --GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE-NKVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred --CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEEccCCeEEEC
Confidence 0134799999999 47888876533 11223455577789999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~ 247 (778)
|||++......... .....+...|+|||++...... ...++.++|+|||||+||+|++|..||.... +.
T Consensus 156 d~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 228 (275)
T cd06608 156 DFGVSAQLDSTLGR------RNTFIGTPYWMAPEVIACDEQP-DASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF 228 (275)
T ss_pred CCccceecccchhh------hcCccccccccCHhHhcccccc-cCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence 99998765432111 1112344579999987542111 1345678999999999999999998875321 11
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++++||..||.+||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 229 KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 1 112455788999999999999999999999998
No 186
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=6.1e-30 Score=272.54 Aligned_cols=239 Identities=15% Similarity=0.208 Sum_probs=186.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.+|.|. | .||+|.++.++..+++|.+.... ....+.+.+|+++++.++||||+++++.+..+
T Consensus 7 ~~i~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-------- 74 (282)
T cd06643 7 WEIIGELGDGAFG--KVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYE-------- 74 (282)
T ss_pred HHHHhhcccCCCe--EEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--------
Confidence 78889999987 7 99999999999999999997542 33456788999999999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+|+||+ +.|..++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 75 ~~~~~v~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~-~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 151 (282)
T cd06643 75 NNLWILIEFCAGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHE-NKIIHRDLKAGNILFTLDGDIKLADFGVSA 151 (282)
T ss_pred CEEEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEccCCCEEEccccccc
Confidence 3899999999 467777654321 12234456669999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~------ 247 (778)
........ .....++..|++||++..... ....++.++|+|||||++|||++|++||..... .
T Consensus 152 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~ 224 (282)
T cd06643 152 KNTRTIQR------RDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 224 (282)
T ss_pred cccccccc------cccccccccccCHhhccccCC-CCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC
Confidence 65332110 111234458999999753210 113456789999999999999999988753211 0
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||+.+|.+||++.++++|+
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 225 PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 0123566789999999999999999999999998
No 187
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=5.3e-30 Score=268.89 Aligned_cols=236 Identities=17% Similarity=0.221 Sum_probs=192.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||+|+++.+++.|+||++...... .....+.+|++.++.++||||+++++.+...
T Consensus 2 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (264)
T cd06623 2 DLERVKVLGQGSSG--VVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE------- 71 (264)
T ss_pred cceeeeeeeecCCe--EEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-------
Confidence 689999999987 7 8999999999999999999875432 3466789999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+..+++||||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 72 -GEISIVLEYMDGGSLADLLKKVGK---IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred -CeEEEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 4899999999 579999876532 2344566679999999999993389999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------hhc-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LRN- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l~~- 248 (778)
.......... ........|+|||.+.+ ..++.++|+|+||+++|+|++|..|+.... ...
T Consensus 148 ~~~~~~~~~~------~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 215 (264)
T cd06623 148 KVLENTLDQC------NTFVGTVTYMSPERIQG------ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI 215 (264)
T ss_pred eecccCCCcc------cceeecccccCHhhhCC------CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH
Confidence 8775432111 11233458999999876 356778999999999999999998875442 110
Q ss_pred --------cCC-CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TAS-IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~-iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... +|..+.+++++||..+|..||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~ 257 (264)
T cd06623 216 CDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHP 257 (264)
T ss_pred hcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCH
Confidence 122 677799999999999999999999999998
No 188
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=3.1e-30 Score=272.85 Aligned_cols=239 Identities=18% Similarity=0.164 Sum_probs=184.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...+|++.+.||.|+ | .||+|+.+ ..+..|+||.+..... ......+.+|+..+++++||||+++++.+...
T Consensus 3 ~~~~~~~~~~ig~G~fg--~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~- 78 (266)
T cd05064 3 DNKSIKIERILGTGRFG--ELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRG- 78 (266)
T ss_pred chHHeEEeeeecccCCC--eEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC-
Confidence 456799999999998 8 89999875 3467899999876432 23345688999999999999999999998753
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 79 -------~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~-~~iiH~dikp~nili~~~~~~~l 148 (266)
T cd05064 79 -------NTMMIVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSE-MGYVHKGLAAHKVLVNSDLVCKI 148 (266)
T ss_pred -------CCcEEEEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeeccccHhhEEEcCCCcEEE
Confidence 4899999999 468888876431 12234456669999999999995 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~---- 245 (778)
+|||.+....... .........+..|+|||.+.+ ..++.++|+|||||++||+++ |..||....
T Consensus 149 ~dfg~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~ 217 (266)
T cd05064 149 SGFRRLQEDKSEA-----IYTTMSGKSPVLWAAPEAIQY------HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV 217 (266)
T ss_pred CCCcccccccccc-----hhcccCCCCceeecCHHHHhh------CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence 9999876543211 011111122347999999875 356789999999999999875 888875321
Q ss_pred hh---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 LR---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|..+.+++.+|+..+|..||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~ 261 (266)
T cd05064 218 IKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSI 261 (266)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHH
Confidence 11 113456778899999999999999999988763
No 189
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=4.1e-30 Score=275.14 Aligned_cols=236 Identities=14% Similarity=0.191 Sum_probs=188.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+.||.|+ | +||.+.++.+++.|+||.+....... .....+.+|+.+++.++||+|+++++.+.++
T Consensus 2 f~~~~~ig~G~~g--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------- 72 (285)
T cd05630 2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK------- 72 (285)
T ss_pred ceeeEEeecCCCe--EEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-------
Confidence 78888999998 8 89999999999999999998653322 2345577899999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++....... .....+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++
T Consensus 73 -~~~~lv~e~~~g~~L~~~l~~~~~~~-l~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 73 -DALCLVLTLMNGGDLKFHIYHMGEAG-FEEGRAVFYAAEICCGLEDLHQ-ERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 3899999999 47988886543222 2233455668999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------hhc-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LRN- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l~~- 248 (778)
........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... ...
T Consensus 150 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~ 216 (285)
T cd05630 150 VHVPEGQT-------IKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL 216 (285)
T ss_pred eecCCCcc-------ccCCCCCccccChHHHcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh
Confidence 76543211 011234568999999876 356788999999999999999999886321 111
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
...++..+.+++++||+.+|..|++ +.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~ 262 (285)
T cd05630 217 VKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHP 262 (285)
T ss_pred hhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcCh
Confidence 1246677889999999999999999 89999998
No 190
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=5e-30 Score=271.08 Aligned_cols=248 Identities=17% Similarity=0.232 Sum_probs=190.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
...|++.+.+|.|+ | .||+|..+.+++.|+||++...... ...+.+|+..++.+ +||||+++++.+..+...
T Consensus 5 ~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~- 78 (272)
T cd06637 5 AGIFELVELVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP- 78 (272)
T ss_pred hhhhhHHHheeecCCe--EEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC-
Confidence 34699999999998 8 8999999999999999999865322 34678899999998 699999999998764321
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
+....+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 79 -~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~-~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 79 -GMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred -CCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHEEECCCCCEEEccC
Confidence 1124799999999 479888876432 122344566679999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++......... .....+...|+|||++.+.-. ....++.++|+|||||++|||++|..||.....
T Consensus 156 g~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~ 228 (272)
T cd06637 156 GVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228 (272)
T ss_pred CCceeccccccc------CCcccccccccCHhHhccccC-cCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 998765432110 111233457999999863210 113466789999999999999999988743210
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 270 (272)
T cd06637 229 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHP 270 (272)
T ss_pred hcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCC
Confidence 0 0124677899999999999999999999999998
No 191
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=5.1e-30 Score=270.18 Aligned_cols=241 Identities=16% Similarity=0.230 Sum_probs=187.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+|++++.+|.|. | +||+|.. .+|+.++||.+..+... ......+.+|+..|+.++||||+++++.+...
T Consensus 1 ~~~~~~~ig~g~~~--~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 74 (265)
T cd06631 1 EWTKGEVLGKGAYG--TVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD--- 74 (265)
T ss_pred CccccceEeccCCe--EEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC---
Confidence 488999999987 7 8999986 47899999998754322 23456789999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+|+||+ ++|.+++.+... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|
T Consensus 75 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 -----NTISIFMEFVPGGSISSILNRFGP---LPEPVFCKYTKQILDGVAYLHN-NCVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred -----CeEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHhEEECCCCeEEecc
Confidence 3899999999 479999876542 2244456679999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~- 247 (778)
||++....................+...|+|||++.+ ..++.++|+|||||++|+|++|..||.... ..
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~ 219 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE------SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY 219 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcC------CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH
Confidence 9998865432111000000112234458999999876 356678999999999999999998875311 00
Q ss_pred ------c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+..++++||..+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~ 263 (265)
T cd06631 220 IGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHD 263 (265)
T ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCC
Confidence 0 123455688899999999999999999999997
No 192
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=8.3e-31 Score=261.60 Aligned_cols=256 Identities=16% Similarity=0.182 Sum_probs=203.3
Q ss_pred CCCCCceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 16 VKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+.+.+|.|.+.+|.|++. -||.++.-.++..+|+|++...+ .+..+.+++|++..|+++||||+++++....+..|+
T Consensus 18 In~~Ryri~~~LgeGGfs-fv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFS-FVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EcCceEEEeeeecCCCce-eeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 456789999999999833 69999999999999999998765 345678999999999999999999999887655443
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCC-CcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~KL 170 (778)
+...||++.|. ++|.+.|......+ ...+..+.|++.+|++||++||. .. +.||||||.||+++..|..+|
T Consensus 95 ---~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl 170 (302)
T KOG2345|consen 95 ---KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVL 170 (302)
T ss_pred ---ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEE
Confidence 57899999999 78999999887666 34455688889999999999995 66 999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccc---cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYA---WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~---~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l- 246 (778)
+|||.++...-.-........... -.++..|+|||++.-. .....+.++|||||||++|+|+.|..||+..--
T Consensus 171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk---~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~ 247 (302)
T KOG2345|consen 171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK---SHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ 247 (302)
T ss_pred EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc---cCcccccccchhhhhHHHHHHHHcCCcchHHhhc
Confidence 999998765432111111111111 2345689999997632 113567899999999999999999999864211
Q ss_pred ---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+...++..+.++++.||+.||.+||++.+++.+-
T Consensus 248 GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~ 297 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKL 297 (302)
T ss_pred CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 11234677899999999999999999999998763
No 193
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=2e-30 Score=283.86 Aligned_cols=243 Identities=13% Similarity=0.121 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.++.+.+++.|+||++.+... .......+++|+.+++.++||+|+++++.++.+
T Consensus 2 ~y~~~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (332)
T cd05623 2 DFEILKVIGRGAFG--EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE------ 73 (332)
T ss_pred CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC------
Confidence 699999999998 8 999999999999999999975321 123344578899999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++.+... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~-~~iiHrDlkp~Nili~~~~~~kL~DfG~ 148 (332)
T cd05623 74 --NNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGHIRLADFGS 148 (332)
T ss_pred --CEEEEEEeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCCCEEEeecch
Confidence 4899999999 689999976432 12334456669999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+..+..... .......++..|+|||++.+.-. ....++.++|+|||||++|||++|..||..... ..
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (332)
T cd05623 149 CLKLMEDGT-----VQSSVAVGTPDYISPEILQAMED-GKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (332)
T ss_pred heecccCCc-----ceecccccCccccCHHHHhcccc-CCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhC
Confidence 876543211 11112245568999999863110 013467799999999999999999998864321 00
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
...+++.+.+++++||..++.+ |+++.++++|+
T Consensus 223 ~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 223 HKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred CCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence 1235667888899998665444 78999999998
No 194
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=5.1e-30 Score=272.59 Aligned_cols=242 Identities=17% Similarity=0.204 Sum_probs=190.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+++|.|. | +||+|+.+.++..|++|.+... .....+.+.+|+++++.++||||+++++.+..+
T Consensus 4 ~~~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 74 (280)
T cd06611 4 NDIWEIIGELGDGAFG--KVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE----- 74 (280)
T ss_pred hhHHHHHHHhcCCCCc--eEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC-----
Confidence 45699999999998 8 8999999989999999999754 233456788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ +.|..++..... ......+..++.|++.||.|||+ .+++|+||+|+||+++.+|.+||+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~nili~~~~~~~l~d~g 148 (280)
T cd06611 75 ---NKLWILIEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHS-HKVIHRDLKAGNILLTLDGDVKLADFG 148 (280)
T ss_pred ---CeEEEEeeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEECCCCCEEEccCc
Confidence 4899999999 478888876432 12334566779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++......... ......+..|++||++..... ....++.++|+|||||++|||++|.+||......
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~~-~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 221 (280)
T cd06611 149 VSAKNKSTLQK------RDTFIGTPYWMAPEVVACETF-KDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL 221 (280)
T ss_pred cchhhcccccc------cceeecchhhcCHHHHhhccc-CCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh
Confidence 87665432111 111234457999999753210 0124567899999999999999999988543211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (280)
T cd06611 222 KSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHP 263 (280)
T ss_pred cCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcCh
Confidence 0123556788999999999999999999999998
No 195
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=3.2e-30 Score=287.24 Aligned_cols=242 Identities=15% Similarity=0.146 Sum_probs=185.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
+..+|++++.||.|+ | .||+|++... +..|+||++...... ...+.+.+|+++|+.+ +||||+++++.+.
T Consensus 36 ~~~~~~~~~~LG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 36 PRDNLQFGKTLGAGAFG--KVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred cHHHceehheecCCCcc--cEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 344699999999998 8 8999986543 357999999765333 3456788999999999 8999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------------------------------
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (778)
.. ..+|+||||| ++|.+++......
T Consensus 113 ~~--------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (374)
T cd05106 113 HG--------GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEM 184 (374)
T ss_pred CC--------CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccccccc
Confidence 63 3799999999 6899888653210
Q ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 123 ----------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 123 ----------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~ 263 (374)
T cd05106 185 RPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS-KNCIHRDVAARNVLLTDGRVAKICDFGLARDIM 263 (374)
T ss_pred CCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCEEeccCchheEEEeCCCeEEEeeceeeeecc
Confidence 011223456679999999999996 899999999999999999999999999998764
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------------ 247 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------------ 247 (778)
..... ........+..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 264 ~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~ 333 (374)
T cd05106 264 NDSNY----VVKGNARLPVKWMAPESIFD------CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ 333 (374)
T ss_pred CCcce----eeccCCCCccceeCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC
Confidence 32110 00001112347999999865 357789999999999999997 88887532110
Q ss_pred --ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 --NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 --~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||+.+|..||++.++++.
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 334 MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012357789999999999999999999998764
No 196
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=5e-30 Score=269.78 Aligned_cols=228 Identities=17% Similarity=0.237 Sum_probs=184.3
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
+|.|. | .||.|+.+.+++.|+||++.+.... ....+.+.+|+++++.++||||+++++.++.+ ..+|+
T Consensus 1 lg~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~l 70 (262)
T cd05572 1 LGVGGFG--RVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--------KYIYM 70 (262)
T ss_pred CCCCCce--EEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--------CccEE
Confidence 45666 6 8999999999999999999865432 23456789999999999999999999998763 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
|+||+ ++|.+++.+... .....+.+++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lH~-~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 71 LMEYCLGGELWTILRDRGL---FDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred EEecCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99998 579999876543 2344566779999999999995 99999999999999999999999999999877543
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------hh------cc-
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LR------NT- 249 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------l~------~~- 249 (778)
. ..........|++||.+.+ ..++.++|+|+|||++|+|++|..||.... .. ..
T Consensus 147 ~-------~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 213 (262)
T cd05572 147 Q-------KTWTFCGTPEYVAPEIILN------KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL 213 (262)
T ss_pred c-------ccccccCCcCccChhHhcC------CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC
Confidence 1 1112234558999999765 356778999999999999999998875332 11 11
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 250 ---ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 250 ---~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
..++..+.+++.+||..+|..|++ +.++++|+
T Consensus 214 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~ 253 (262)
T cd05572 214 EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHK 253 (262)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcCh
Confidence 134567899999999999999999 99999998
No 197
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=1.2e-29 Score=274.28 Aligned_cols=239 Identities=15% Similarity=0.145 Sum_probs=189.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...|++.+.+|.|. | +||.|+.+.+|+.|+||++...... ......+.+|+.+++.++||||+++++++..+
T Consensus 13 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--- 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE--- 87 (307)
T ss_pred cchhhhhheeecCCCCe--EEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC---
Confidence 456699999999997 7 9999999999999999998754322 23456688999999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+|+||+ +.|.+++..... ......+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 88 -----~~~~lv~e~~~g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~-~~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 88 -----HTAWLVMEYCLGSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHS-HERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred -----CeEEEEHHhhCCCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEECCCCCEEEeec
Confidence 3789999999 577777654322 12344566779999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++....... ...+...|+|||++.+.- ...++.++|+|||||++|||++|.+|+......
T Consensus 160 g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~ 226 (307)
T cd06607 160 GSASLVSPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226 (307)
T ss_pred CcceecCCCC----------CccCCccccCceeeeccC---CCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH
Confidence 9886553311 112345799999875310 134667899999999999999999887532210
Q ss_pred ---cc-----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---NT-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---~~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ..++..+..++.+||+.+|.+||++.+++.|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 227 AQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred hcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 01 12456788999999999999999999999997
No 198
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=8.3e-30 Score=267.66 Aligned_cols=243 Identities=17% Similarity=0.261 Sum_probs=193.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|.+.+.||.|+ | .||.|+...++..|+||.+............+.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~~~~~lg~G~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~------- 71 (264)
T cd06626 1 RWQRGNKIGGGTFG--KVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR------- 71 (264)
T ss_pred CceeeeEeecCCCc--EEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC-------
Confidence 589999999997 7 899999999999999999987655445677899999999999999999999988753
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+ ++|.+++...... ....+.+++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 72 -EKVYIFMEYCSGGTLEELLEHGRIL---DEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred -CEEEEEEecCCCCcHHHHHhhcCCC---ChHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 4899999999 5799988765432 234466679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--h------h-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--L------R- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--l------~- 247 (778)
........... .. .........|+|||++.+.. ...+..++|+|+|||++|++++|..||.... . .
T Consensus 147 ~~~~~~~~~~~-~~-~~~~~~~~~~~~PE~~~~~~---~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~ 221 (264)
T cd06626 147 VKLKNNTTTMG-EE-VQSLAGTPAYMAPEVITGGK---GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA 221 (264)
T ss_pred cccCCCCCccc-cc-ccCCcCCcCccChhhccCCC---CCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc
Confidence 87755322111 00 01123345899999987631 1236789999999999999999998885321 0 0
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||+.+|.+||++.+++.|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~ 262 (264)
T cd06626 222 GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHP 262 (264)
T ss_pred CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence 0112356678999999999999999999999997
No 199
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=5.3e-30 Score=270.29 Aligned_cols=241 Identities=14% Similarity=0.197 Sum_probs=185.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.+|.|+ | .||.|.++.+|..|+||.+...... ....+.+.+|++.++.++||||+++++++.+..
T Consensus 2 ~~~~~~~~l~~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 77 (265)
T cd06652 2 TNWRLGKLLGQGAFG--RVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM-- 77 (265)
T ss_pred CcceEeeEEecCCce--EEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC--
Confidence 4699999999998 8 8999999999999999998643221 234567889999999999999999999887543
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|++|||+ ++|.+++...... ....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|
T Consensus 78 ----~~~~~~v~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 78 ----ERTLSIFMEHMPGGSIKDQLKSYGAL---TENVTRKYTRQILEGVSYLHS-NMIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ----CceEEEEEEecCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEecCCCCEEECc
Confidence 24789999999 4799988765432 233455669999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||++........... . .....+...|+|||++.+ ...+.++|+|||||++|||++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 220 (265)
T cd06652 150 FGASKRLQTICLSGT-G--MKSVTGTPYWMSPEVISG------EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK 220 (265)
T ss_pred Ccccccccccccccc-c--cccCCCCccccChhhhcC------CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH
Confidence 999886643211100 0 011123458999999865 345678999999999999999998875321 110
Q ss_pred ------cCCCC----cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIP----KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP----~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+| ..+..++.+|+. +|++||+++++++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 221 IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 11223 345677888884 899999999999998
No 200
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=4.1e-30 Score=268.88 Aligned_cols=238 Identities=20% Similarity=0.285 Sum_probs=189.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|+ | .||+|+.+.+|..|++|.+..........+.+++|+.+++.++||||+++++.++..
T Consensus 1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~------- 71 (257)
T cd08225 1 RYEIIKKIGEGSFG--KIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN------- 71 (257)
T ss_pred CceEEEEecCCCcc--eEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-------
Confidence 589999999987 7 899999999999999999986533333456788999999999999999999998764
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc-EEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-WKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~-~KL~dFgl 175 (778)
..+|+|+||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||++++++. +||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 72 -GRLFIVMEYCDGGDLMKRINRQRGV-LFSEDQILSWFVQISLGLKHIHD-RKILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred -CeEEEEEecCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEcCCCCeEEeccccc
Confidence 3899999999 4798888764321 12344466679999999999995 99999999999999998865 69999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+.......... ....+...|+|||+..+. .++.++|+|||||++|+|++|..|+.......
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~~ape~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 216 (257)
T cd08225 149 ARQLNDSMELA------YTCVGTPYYLSPEICQNR------PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ 216 (257)
T ss_pred chhccCCcccc------cccCCCccccCHHHHcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence 88765422111 111244579999987652 46678999999999999999998876432110
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+|+..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~ 255 (257)
T cd08225 217 GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRP 255 (257)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCC
Confidence 123566789999999999999999999999997
No 201
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=5.9e-30 Score=272.11 Aligned_cols=235 Identities=17% Similarity=0.207 Sum_probs=189.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+++|.|. | .||.|+++.+++.|+||++..+.. ......+.+|++++++++||||+++++.++.+
T Consensus 4 ~~y~~~~~lg~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (277)
T cd06640 4 ELFTKLERIGKGSFG--EVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG------ 74 (277)
T ss_pred HhhhhhhhcccCCCe--EEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC------
Confidence 3588889999998 7 899999999999999999986532 33466788999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.+++..... ....+.+++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 75 --~~~~lv~e~~~~~~L~~~i~~~~l----~~~~~~~~~~~l~~~l~~lh~-~~ivH~dl~p~Nil~~~~~~~~l~dfg~ 147 (277)
T cd06640 75 --TKLWIIMEYLGGGSALDLLRAGPF----DEFQIATMLKEILKGLDYLHS-EKKIHRDIKAANVLLSEQGDVKLADFGV 147 (277)
T ss_pred --CEEEEEEecCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCccCcCCChhhEEEcCCCCEEEccccc
Confidence 3899999999 478888875432 234466679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~--- 248 (778)
+......... .........|+|||++.+ ...+.++|+|||||++|||++|..|+...... .
T Consensus 148 ~~~~~~~~~~------~~~~~~~~~y~apE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 215 (277)
T cd06640 148 AGQLTDTQIK------RNTFVGTPFWMAPEVIQQ------SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK 215 (277)
T ss_pred ceeccCCccc------cccccCcccccCHhHhcc------CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc
Confidence 8776442110 111123447999999875 34667899999999999999999887532110 0
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..+|..||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHK 254 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhCh
Confidence 123456788899999999999999999999997
No 202
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=2.6e-30 Score=282.99 Aligned_cols=243 Identities=14% Similarity=0.112 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.++++.+++.|+||++.+... .......+++|+.+++.++||||+++++.++.+
T Consensus 2 ~y~i~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~------ 73 (331)
T cd05624 2 DFEIIKVIGRGAFG--EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE------ 73 (331)
T ss_pred CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 699999999998 8 999999999999999999975321 123345678899999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~-~~iiHrDlkp~Nill~~~~~~kl~DfG~ 148 (331)
T cd05624 74 --NYLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQ-LHYVHRDIKPDNVLLDMNGHIRLADFGS 148 (331)
T ss_pred --CEEEEEEeCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCchHHEEEcCCCCEEEEeccc
Confidence 4899999999 579999976431 12234456668999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+..+...... ......++..|+|||++.+.... ...++.++|+|||||++|||++|..||......
T Consensus 149 a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05624 149 CLKMNQDGTV-----QSSVAVGTPDYISPEILQAMEDG-MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred eeeccCCCce-----eeccccCCcccCCHHHHhccccC-CCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc
Confidence 8776542211 11112355689999998642110 023567899999999999999999988543211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
....++..+.+++.+||...+.+ |++++++++|+
T Consensus 223 ~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~ 267 (331)
T cd05624 223 HEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA 267 (331)
T ss_pred CCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence 01234667888899998865544 56899999997
No 203
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=4.1e-30 Score=281.69 Aligned_cols=245 Identities=19% Similarity=0.293 Sum_probs=190.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
..+|++.+.+|.|+ | .||+|.++.+|+.|+||.+............+.+|+..++++ +||||+++++++....
T Consensus 6 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--- 80 (337)
T cd07852 6 LRKYEILQKLGKGAYG--IVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--- 80 (337)
T ss_pred hhHHHHhHhhcCCCCe--eEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC---
Confidence 45799999999998 8 899999999999999999875433333345677899999999 9999999999987543
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+||||+ ++|..++..... ......+++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||
T Consensus 81 ---~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~i~~qi~~~L~~LH~-~~i~H~dl~p~nill~~~~~~kl~d~g 152 (337)
T cd07852 81 ---DKDIYLVFEYMETDLHAVIRANIL----EDVHKRYIMYQLLKALKYIHS-GNVIHRDLKPSNILLNSDCRVKLADFG 152 (337)
T ss_pred ---CceEEEEecccccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEEeecc
Confidence 34789999999 578888765421 233355669999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++............+. .....++..|+|||++.+. ...+.++|+|||||++|+|++|.++|....-
T Consensus 153 ~~~~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~ 226 (337)
T cd07852 153 LARSLSELEENPENPV-LTDYVATRWYRAPEILLGS-----TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKII 226 (337)
T ss_pred chhccccccccccCcc-hhcccccccccCceeeecc-----ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 9887654321110011 1112345579999987643 3456789999999999999999988742100
Q ss_pred -----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||+.+|.+||++.++++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~ 296 (337)
T cd07852 227 EVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP 296 (337)
T ss_pred HHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhCh
Confidence 00123567788999999999999999999999998
No 204
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=1e-29 Score=264.56 Aligned_cols=240 Identities=19% Similarity=0.276 Sum_probs=194.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|.+.+.++.|+ | .||+|+++.++..|+||++..........+.+.+|+..+++++||||+++++.+....
T Consensus 1 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 72 (260)
T cd06606 1 EWTRGELLGRGSFG--SVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE------ 72 (260)
T ss_pred CceeeeEeeecCce--EEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC------
Confidence 488889999887 6 9999999999999999999876544455778999999999999999999999998642
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+|+|+||+ ++|.+++.... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~-~~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 73 KNTLNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHS-NGIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred CCeEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCCCEEEcccccE
Confidence 14899999999 46999888764 22344566779999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--------hh-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LR- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--------l~- 247 (778)
.......... ..........|++||...+. ..+.++|+|||||++|+|++|..++.... +.
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (260)
T cd06606 149 KRLGDIETGE----GTGSVRGTPYWMAPEVIRGE------EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS 218 (260)
T ss_pred Eecccccccc----cccCCCCCccccCHhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence 8776532110 01112334589999998763 46789999999999999999998875432 01
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++.+|+..+|.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~ 258 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHP 258 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCC
Confidence 1 123467789999999999999999999999998
No 205
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=7.1e-30 Score=270.87 Aligned_cols=235 Identities=19% Similarity=0.259 Sum_probs=188.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr---HPnIlk~~d~~e~e~~~g 95 (778)
.|++.+.+|.|+ | .||+|+++.++..|+||.+...... ...+.+.+|+.+++.++ ||||+++++.++.+
T Consensus 2 ~y~~~~~l~~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~---- 74 (277)
T cd06917 2 LYQRLELIGRGAYG--AVYRGKHVPTGRVVALKIINLDTPD-DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG---- 74 (277)
T ss_pred hhhhhhheeccCCc--eEEEEEEcCCCcEEEEEEecCCCCc-hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC----
Confidence 388889999998 8 8999999999999999998764332 34556888999999997 99999999998763
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~----l~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06917 75 ----PRLWIIMEYAEGGSVRTLMKAGP----IAEKYISVIIREVLVALKYIHK-VGVIHRDIKAANILVTNTGNVKLCDF 145 (277)
T ss_pred ----CEEEEEEecCCCCcHHHHHHccC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHHEEEcCCCCEEEccC
Confidence 4899999999 47988886542 2344466679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~----- 248 (778)
|++......... .....+...|+|||.+.++ ..++.++|+|||||++|+|++|..||.......
T Consensus 146 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~ 214 (277)
T cd06917 146 GVAALLNQNSSK------RSTFVGTPYWMAPEVITEG-----KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI 214 (277)
T ss_pred CceeecCCCccc------cccccCCcceeCHHHhccC-----CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc
Confidence 998877543210 1112344579999998653 345678999999999999999999885432110
Q ss_pred ----c-----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----T-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+++.+||+.+|.+||++.+++.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~ 256 (277)
T cd06917 215 PKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSK 256 (277)
T ss_pred ccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhCh
Confidence 0 12566788999999999999999999999997
No 206
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=1.2e-29 Score=266.98 Aligned_cols=238 Identities=18% Similarity=0.215 Sum_probs=188.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|+ | .||+|..+.+|+.|+||.+...... ....+.+.+|++++++++||||+++++.+..+
T Consensus 3 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~------ 74 (267)
T cd08224 3 NFKIEKKIGKGQFS--VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN------ 74 (267)
T ss_pred ceeeeeeeccCCce--EEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC------
Confidence 699999999998 8 8999999999999999998753322 23456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...|+||||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 75 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-KRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecCCcChhhEEECCCCcEEEeccc
Confidence 3789999999 4899888764321 112344466669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------hc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RN 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------~~ 248 (778)
++..+...... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|..|+..... ..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08224 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 219 (267)
T ss_pred eeeeccCCCcc------cceecCCccccCHHHhcc------CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh
Confidence 98765432110 111234457999999875 3567789999999999999999988743211 00
Q ss_pred -----c-----CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -----T-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -----~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ..++..+.+++.+||..+|..||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~ 261 (267)
T cd08224 220 IEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQV 261 (267)
T ss_pred hhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 1 1345578889999999999999999988764
No 207
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=2.9e-30 Score=283.06 Aligned_cols=243 Identities=18% Similarity=0.260 Sum_probs=191.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|.+.+.+|.|+ | +||.|+++.++..|+||.+............+.+|+.+|+.++||||+++++++......
T Consensus 5 ~~y~~~~~lg~G~~~--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~--- 79 (337)
T cd07858 5 TKYVPIKPIGRGAYG--IVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHRE--- 79 (337)
T ss_pred cceeEEEEeccCCCe--EEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccc---
Confidence 4699999999998 8 899999999999999999876433333345677899999999999999999988753211
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|||+||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 80 ~~~~~~lv~e~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 80 AFNDVYIVYELMDTDLHQIIRSSQT---LSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred ccCcEEEEEeCCCCCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 023689999999 578888765432 3345567779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
......... .....++..|+|||.+.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 156 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 224 (337)
T cd07858 156 RTTSEKGDF------MTEYVVTRWYRAPELLLNC-----SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITEL 224 (337)
T ss_pred cccCCCccc------ccccccccCccChHHHhcC-----CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHH
Confidence 876442110 1112345589999987643 2466789999999999999999988743210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||+.+|.+||++.++++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~ 292 (337)
T cd07858 225 LGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP 292 (337)
T ss_pred hCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCc
Confidence 00124567788999999999999999999999998
No 208
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=2.1e-30 Score=275.30 Aligned_cols=234 Identities=17% Similarity=0.220 Sum_probs=188.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
-|++.+.||.|. | .||+|.+..++..|+||.+...... ...+.+.+|++++++++||||+++++.+..+
T Consensus 5 ~y~~~~~l~~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 74 (277)
T cd06642 5 LFTKLERIGKGSFG--EVYKGIDNRTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYITRYYGSYLKG------- 74 (277)
T ss_pred HHHHHHHhcCCCCe--eEEEEEEcCCCeEEEEEEeccccch-HHHHHHHHHHHHHHcCCCCccHhhhcccccC-------
Confidence 477888899987 7 8999999999999999998755333 3456789999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++.... .....+...+.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 75 -~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06642 75 -TKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred -CceEEEEEccCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhc-CCeeccCCChheEEEeCCCCEEEcccccc
Confidence 4899999999 46888876532 2344566779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~---- 248 (778)
..+..... ......+...|++||++.+ ..++.++|+|||||++|||++|..|+...... .
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 216 (277)
T cd06642 149 GQLTDTQI------KRNTFVGTPFWMAPEVIKQ------SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN 216 (277)
T ss_pred ccccCcch------hhhcccCcccccCHHHhCc------CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC
Confidence 77654211 0111123457999999876 35677899999999999999999887532110 0
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06642 217 SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHK 254 (277)
T ss_pred CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence 123566788999999999999999999999998
No 209
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.97 E-value=4.4e-30 Score=286.22 Aligned_cols=241 Identities=16% Similarity=0.192 Sum_probs=183.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~ 90 (778)
..+|++++.||.|+ | +||+|++ ..++..|+||++...... ...+.+.+|+++|+.+ +||||+++++.+..
T Consensus 34 ~~~~~~~~~LG~G~fG--~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFG--KVVEATAYGLFKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred hHHeehhheecCCccc--eEEEEEEeccccCccceeEEEEeccCCcCc-HHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 34799999999998 8 8999974 345678999998754322 3456788999999999 89999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC----------------------------------------------
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------------------------------- 122 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------------------------------------- 122 (778)
. ...|+||||| ++|.+++......
T Consensus 111 ~--------~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (375)
T cd05104 111 G--------GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTK 182 (375)
T ss_pred C--------CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccc
Confidence 4 3789999999 6899888653210
Q ss_pred --------------------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 123 --------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 123 --------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 261 (375)
T cd05104 183 ADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS-KNCIHRDLAARNILLTHGRITKICDFGLA 261 (375)
T ss_pred cccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCchhhEEEECCCcEEEecCccc
Confidence 001122345568999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh--------hh
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE--------LR 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~--------l~ 247 (778)
.......... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||.... +.
T Consensus 262 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~ 331 (375)
T cd05104 262 RDIRNDSNYV----VKGNARLPVKWMAPESIFN------CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK 331 (375)
T ss_pred eeccCccccc----ccCCCCCCcceeChhHhcC------CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH
Confidence 8765422100 0001122346999999876 356789999999999999998 677764321 11
Q ss_pred c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....|..+.+++.+||+.||.+||++.++++.
T Consensus 332 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 332 EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0 12356678999999999999999999999875
No 210
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=7.5e-30 Score=272.95 Aligned_cols=236 Identities=15% Similarity=0.184 Sum_probs=187.8
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+.||.|+ | +||.|+++.+++.|+||.+....... .....+.+|+++|+.++||||+.+++.+..+
T Consensus 2 ~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------- 72 (285)
T cd05632 2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK------- 72 (285)
T ss_pred ceEEEEEecCCCe--EEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-------
Confidence 77888899998 8 99999999999999999997653322 2345577899999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|..++...+.. ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~-~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 73 -DALCLVLTIMNGGDLKFHIYNMGNP-GFEEERALFYAAEILCGLEDLHR-ENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred -CEEEEEEEeccCccHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 3899999999 4688777654321 12344566679999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------h-h-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------L-R- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l-~- 247 (778)
........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... . .
T Consensus 150 ~~~~~~~~-------~~~~~g~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~ 216 (285)
T cd05632 150 VKIPEGES-------IRGRVGTVGYMAPEVLNN------QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR 216 (285)
T ss_pred eecCCCCc-------ccCCCCCcCccChHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 76533110 112245568999999876 356778999999999999999999885321 1 0
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
....++..+.+++.+||+.+|.+|++ +.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05632 217 VLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHP 262 (285)
T ss_pred hhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcCh
Confidence 01346667888999999999999999 78999987
No 211
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=7.8e-30 Score=272.33 Aligned_cols=241 Identities=17% Similarity=0.153 Sum_probs=185.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | .||.++++.+++.|+||.+...... .....+.+|+..+.++. ||||+++++.+..+
T Consensus 5 ~~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~------ 75 (288)
T cd06616 5 DLKDLGEIGRGAFG--TVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE------ 75 (288)
T ss_pred HhHHHHHhCCCCce--EEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC------
Confidence 577788899987 7 9999999999999999999865333 33456788999999996 99999999998764
Q ss_pred cccEEEEEecCC-cChHHHHHHh--CcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKEL--GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~--~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...|++|||+ .+|..+.... ..........+..++.|++.||.|||+..+++||||||+||+++.+|.+||+|||
T Consensus 76 --~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 76 --GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred --CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecc
Confidence 3789999999 4555433221 1112233445667799999999999965699999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hhhcc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRNT 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l~~~ 249 (778)
++..+..... .....+...|++||++.+.- ...++.++|+|||||++|+|++|..||... .+...
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 223 (288)
T cd06616 154 ISGQLVDSIA-------KTRDAGCRPYMAPERIDPSA---RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV 223 (288)
T ss_pred hhHHhccCCc-------cccccCccCccCHHHhcccc---ccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh
Confidence 9876643211 11113345799999986521 125677999999999999999999987532 11110
Q ss_pred -------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 -------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 -------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+||+.+|.+||++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 224 VKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred cCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 12556688999999999999999999999998
No 212
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=5.7e-30 Score=279.62 Aligned_cols=244 Identities=16% Similarity=0.131 Sum_probs=183.3
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.+.||.|. +.-+||.++++.+|+.|+||++..........+.+++|+.+++.++||||+++++++... ..+
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--------~~~ 74 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--------SWL 74 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--------Cce
Confidence 34566664 222899999999999999999987654555667899999999999999999999999874 389
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+|+||+ ++|.+++...... ......+..++.||+.||.|||+ ++++||||||+||+++.++.+|++||+.+....
T Consensus 75 ~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~-~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 75 WVISPFMAYGSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQ-NGYIHRNIKASHILISGDGLVSLSGLSHLYSLV 152 (328)
T ss_pred EEEEecccCCCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence 9999999 4788888765322 23344566779999999999995 999999999999999999999999998765443
Q ss_pred CCCCCCCCCccccc-cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h-hc------
Q 004025 181 GNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L-RN------ 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l-~~------ 248 (778)
.........+.... ......|++||++.++. ..++.++|+|||||++|||++|..||.... + ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDL----YGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPY 228 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCC
Confidence 22111100000000 11234699999987632 235678999999999999999998875321 0 00
Q ss_pred ------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...++..+.+++++||..||.+||++.++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 229 SPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred CCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00123457788999999999999999999999
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 309 ~ 309 (328)
T cd08226 309 A 309 (328)
T ss_pred H
Confidence 8
No 213
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.97 E-value=7.4e-30 Score=270.92 Aligned_cols=241 Identities=16% Similarity=0.177 Sum_probs=187.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...|.+.+.+|.|+ | .||+|+.+. ++..|+||.+..... ....+.+.+|+++|+.++||||+++++.++..
T Consensus 4 ~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFG--KVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred hHHhhHHhhccccCCc--eEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 34699999999998 8 899998753 468899999875433 23456789999999999999999999999874
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcC-----------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-----------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-----------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
...|+||||+ ++|.+++...+.. .......+..++.||+.||.|||+ .+++||||||+
T Consensus 81 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~ 151 (280)
T cd05049 81 --------DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATR 151 (280)
T ss_pred --------CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeeccccccc
Confidence 3899999999 5799999865421 112233456679999999999995 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-C
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g 237 (778)
||+++.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|||++ |
T Consensus 152 nili~~~~~~kl~d~g~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~e~~~~g 221 (280)
T cd05049 152 NCLVGYDLVVKIGDFGMSRDVYTTDYYRV----GGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVVLWEIFTYG 221 (280)
T ss_pred eEEEcCCCeEEECCcccceecccCcceec----CCCCcccceecChhhhcc------CCcchhhhHHHHHHHHHHHHhcC
Confidence 99999999999999999876533211000 011123457999999876 356778999999999999998 8
Q ss_pred CCCCChhhh----h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 238 MRLSKTEEL----R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 238 ~~p~~~~~l----~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
..||..... . ....+|..+.+++.+||..||..||++.++++.
T Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 277 (280)
T cd05049 222 KQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHER 277 (280)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 877642111 0 013466788999999999999999999999864
No 214
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=1.3e-29 Score=267.59 Aligned_cols=246 Identities=12% Similarity=0.116 Sum_probs=186.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
|.+++.+|.|+ | .||.|+.+.++ ..|+||.+............+.+|+..++.++||||+++++.+......
T Consensus 1 ~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 76 (273)
T cd05035 1 LKLGKILGEGEFG--SVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSL-- 76 (273)
T ss_pred CccccccCcCCCc--eEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcc--
Confidence 67899999998 8 89999987544 7899999986544445567789999999999999999999987653310
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcC---CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
......|+++||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||++++++.+||+
T Consensus 77 ~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 77 QKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN-RNFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred ccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchheEEECCCCeEEEC
Confidence 0023589999999 5788888654321 122334466679999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l---- 246 (778)
|||+++.......... ......+..|++||.+.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 156 dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05035 156 DFGLSKKIYSGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY 225 (273)
T ss_pred Cccceeeccccccccc----cccccCCccccCHhhccc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999887654221100 111122347999998765 356789999999999999999 7777643211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||+.||.+||++.+++++-
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l 269 (273)
T cd05035 226 DYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVL 269 (273)
T ss_pred HHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11234667789999999999999999999998753
No 215
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=4.4e-30 Score=282.34 Aligned_cols=239 Identities=16% Similarity=0.259 Sum_probs=186.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|.+.+.||.|+ | .||+|+++.+|+.|+||++.+....+.....+.+|+.+++.++||||++++++++..... .
T Consensus 15 ~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--~ 90 (342)
T cd07879 15 ERYTSLKQVGSGAYG--SVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSG--D 90 (342)
T ss_pred cceEEEEEeeecCCe--EEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccC--C
Confidence 5799999999987 7 899999999999999999986544444455678999999999999999999998753210 0
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+|+||+. .|..++.. ......+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 91 EFQDFYLVMPYMQTDLQKIMGH-----PLSEDKVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred CCceEEEEecccccCHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 1236799999995 45544321 12345577789999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
....... ....++..|+|||++.+. ..++.++|+|||||++|||++|+.+|..... .
T Consensus 165 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~ 230 (342)
T cd07879 165 RHADAEM---------TGYVVTRWYRAPEVILNW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 230 (342)
T ss_pred cCCCCCC---------CCceeeecccChhhhcCc-----cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7653211 112334579999997652 2456789999999999999999988854210 0
Q ss_pred ----------------------c------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||+.||.+||++.+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~ 298 (342)
T cd07879 231 TGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHP 298 (342)
T ss_pred cCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 0 013445678899999999999999999999998
No 216
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=1.2e-29 Score=265.18 Aligned_cols=236 Identities=20% Similarity=0.280 Sum_probs=188.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+|++++.+|.|+ | +||+|..+.+++.|+||.+...... ....+.+.+|+..++.++||||+++++.++.+
T Consensus 1 ~~~~~~~ig~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 74 (258)
T cd06632 1 RWRKGELLGSGSFG--SVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE---- 74 (258)
T ss_pred CccccceeeecCCc--eEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC----
Confidence 488889999998 7 9999999999999999998764322 23566789999999999999999999998763
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+++||+ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 75 ----DNLYIFLELVPGGSLAKLLKKYGS---FPEPVIRLYTRQILLGLEYLHD-RNTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred ----CeEEEEEEecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEccC
Confidence 4899999999 479998876542 2234456669999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h---
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l--- 246 (778)
|++........ .....+...|++||.+... ..++.++|+|||||++|+|++|..||.... .
T Consensus 147 ~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~-----~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 214 (258)
T cd06632 147 GMAKQVVEFSF-------AKSFKGSPYWMAPEVIAQQ-----GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKI 214 (258)
T ss_pred ccceecccccc-------ccccCCCcceeCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHH
Confidence 99877644220 1112334579999997652 126788999999999999999998875321 0
Q ss_pred ---hcc----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---RNT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---~~~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... ..++..+.+++.+||..+|.+||++.+++.|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~ 256 (258)
T cd06632 215 GRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHP 256 (258)
T ss_pred HhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCC
Confidence 011 23455678889999999999999999999997
No 217
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=1.3e-29 Score=270.20 Aligned_cols=241 Identities=17% Similarity=0.230 Sum_probs=185.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..|++.+.||.|+ | +||+|+. ..++..|+||.+..... ......+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-- 79 (283)
T cd05090 5 SAVRFMEELGECAFG--KIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQE-- 79 (283)
T ss_pred hhceeeeeccccCCc--ceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--
Confidence 4689999999998 8 8999985 34568899999875433 33456788999999999999999999998763
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcC--------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE--------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||
T Consensus 80 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp 152 (283)
T cd05090 80 ------QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAA 152 (283)
T ss_pred ------CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-cCeehhcccc
Confidence 3789999999 4799888643210 111233355668999999999995 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
+||+++.++.+||+|||+++......... .......+..|+|||.+.+. .++.++|+|||||++|||++
T Consensus 153 ~nili~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~~ 222 (283)
T cd05090 153 RNILIGEQLHVKISDLGLSREIYSADYYR----VQPKSLLPIRWMPPEAIMYG------KFSSDSDIWSFGVVLWEIFSF 222 (283)
T ss_pred ceEEEcCCCcEEeccccccccccCCccee----cccCCCccceecChHHhccC------CCCchhhhHHHHHHHHHHHcC
Confidence 99999999999999999998764422110 01111223479999998753 46779999999999999998
Q ss_pred CCCCCChhh---h----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 237 GMRLSKTEE---L----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 237 g~~p~~~~~---l----~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|..||.... + . ....+|..+.+++.+|++.+|.+||++.+++++.
T Consensus 223 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 280 (283)
T cd05090 223 GLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence 777764311 1 0 1134677788999999999999999999998764
No 218
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=2e-29 Score=262.65 Aligned_cols=236 Identities=20% Similarity=0.331 Sum_probs=193.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||.|+++.+++.|+||.+......+...+.+.+|++.+++++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (254)
T cd06627 1 NYQLGDLIGRGAFG--VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS------- 71 (254)
T ss_pred CceeeeEEcccCCe--EEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-------
Confidence 589999999987 7 999999999999999999987655445667899999999999999999999998763
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|++|||+ ++|.+++..... .....+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 72 -DSLYIILEYAENGSLRQIIKKFGP---FPESLVAVYVYQVLQGLAYLHE-QGVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred -CEEEEEEecCCCCcHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEECCCCCEEEeccccc
Confidence 3899999999 479888876532 2345567779999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------h
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------R 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------~ 247 (778)
......... .........|++||...+. .++.++|+|+||+++|+|++|..++..... .
T Consensus 147 ~~~~~~~~~------~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (254)
T cd06627 147 TKLNDVSKD------DASVVGTPYWMAPEVIEMS------GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD 214 (254)
T ss_pred eecCCCccc------ccccccchhhcCHhhhcCC------CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc
Confidence 877653211 1112234479999998653 467789999999999999999988743210 0
Q ss_pred c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||..+|++||++.+++.++
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~ 252 (254)
T cd06627 215 DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHP 252 (254)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCC
Confidence 1 134567788999999999999999999999987
No 219
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=9e-30 Score=268.35 Aligned_cols=238 Identities=18% Similarity=0.227 Sum_probs=187.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|. | .||+|+.+.++..|+||.+...... ......+.+|+++++.++||||+++++.+..+
T Consensus 3 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 74 (267)
T cd08229 3 NFRIEKKIGRGQFS--EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED------ 74 (267)
T ss_pred hhhhhhhhcccCCe--EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC------
Confidence 589999999998 8 8999999999999999988754322 23456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|++|||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCCEEECcch
Confidence 3899999999 4798888754322 122334456669999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------hc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RN 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------~~ 248 (778)
++......... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|..||..... ..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08229 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 219 (267)
T ss_pred hhhccccCCcc------cccccCCcCccCHHHhcC------CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh
Confidence 98766432110 111234458999999865 3566789999999999999999988743211 00
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...++..+..++.+||..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~ 261 (267)
T cd08229 220 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDV 261 (267)
T ss_pred hhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHH
Confidence 01345678899999999999999999988764
No 220
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-30 Score=286.43 Aligned_cols=238 Identities=16% Similarity=0.181 Sum_probs=189.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
....++++||+|. | +||+|++- -.||||+++.....+..++.+++||..||+-||-||+-|++++-..
T Consensus 392 ~ev~l~~rIGsGsFG--tV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p------ 460 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFG--TVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP------ 460 (678)
T ss_pred HHhhccceecccccc--ceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC------
Confidence 3456788999998 8 99999985 4699999998877778999999999999999999999999999763
Q ss_pred cccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.+.|||.+|+ +|+.+|...... .....+.-++.||++|+.|||. ++|||+|||..|||+.+++.+||+|||+
T Consensus 461 ---~~AIiTqwCeGsSLY~hlHv~etk--fdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 461 ---PLAIITQWCEGSSLYTHLHVQETK--FDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred ---ceeeeehhccCchhhhhccchhhh--hhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccccceEEccCCcEEEecccc
Confidence 3599999994 599988754311 1112245569999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
++....... ...+.. ..+-..|||||+++-+- ...++..+|+|+|||++|||++|..||..+..
T Consensus 535 atvk~~w~g--~~q~~q--p~gsilwmAPEvIRmqd---~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGr 607 (678)
T KOG0193|consen 535 ATVKTRWSG--EQQLEQ--PHGSLLWMAPEVIRMQD---DNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGR 607 (678)
T ss_pred eeeeeeecc--ccccCC--CccchhhhcHHHHhhcc---cCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecc
Confidence 976543211 001100 01223899999998421 24678899999999999999999988863221
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+.|+.+.+++..||..+++.||.+.++|..
T Consensus 608 G~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~ 649 (678)
T KOG0193|consen 608 GYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSK 649 (678)
T ss_pred cccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHH
Confidence 1224678899999999999999999999988863
No 221
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=9.2e-30 Score=276.35 Aligned_cols=240 Identities=16% Similarity=0.186 Sum_probs=185.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+...+|++.+.||+|+ | +||+|+++.+++. |+||++.... .....+.+.+|+.+++.++||||+++++.+..
T Consensus 4 ~~~~~f~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~ 80 (316)
T cd05108 4 LKETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLT 80 (316)
T ss_pred cchhhceeeeeeecCCCc--eEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC
Confidence 3556799999999998 8 9999998777664 8999986432 23345678899999999999999999998875
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
+ ..++++||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+
T Consensus 81 ~---------~~~~v~e~~~~g~l~~~l~~~~~~--~~~~~~~~~~~qi~~~L~~LH~-~~iiH~dlkp~Nill~~~~~~ 148 (316)
T cd05108 81 S---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEE-RRLVHRDLAARNVLVKTPQHV 148 (316)
T ss_pred C---------CceeeeecCCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEecCCCcE
Confidence 3 468999998 6799988764321 1233344558899999999995 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL- 246 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l- 246 (778)
||+|||++..+..... .........+..|++||++.+ ..++.++|+|||||++|||++ |..|+.....
T Consensus 149 kl~DfG~a~~~~~~~~----~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~ 218 (316)
T cd05108 149 KITDFGLAKLLGADEK----EYHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 218 (316)
T ss_pred EEccccccccccCCCc----ceeccCCccceeecChHHhcc------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 9999999987654221 111111122347999999876 356789999999999999997 8888754221
Q ss_pred --hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ...++..+..++.+||..+|..||++.+++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 219 EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 11 12345568888999999999999999999875
No 222
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.3e-29 Score=277.08 Aligned_cols=236 Identities=18% Similarity=0.261 Sum_probs=189.0
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | .||+|+++.+|..|+||++.+........+.+.+|+.+++.++||||+++++++....
T Consensus 9 ~~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---- 82 (328)
T cd07856 9 TNRYVDLQPVGMGAFG--LVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL---- 82 (328)
T ss_pred ccceEEEEeecccCCe--EEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC----
Confidence 45799999999988 8 8999999999999999998764433344567889999999999999999999987532
Q ss_pred CcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+|+||++ .|..+++.... ....+.+++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 83 ---~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~~~~ql~~aL~~LH~-~~iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 83 ---EDIYFVTELLGTDLHRLLTSRPL----EKQFIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred ---CcEEEEeehhccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEeECCCCCEEeCcccc
Confidence 37899999994 67777764332 234466779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
+....... ....+...|++||.+.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 155 ~~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~ 220 (328)
T cd07856 155 ARIQDPQM---------TGYVSTRYYRAPEIMLTW-----QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220 (328)
T ss_pred ccccCCCc---------CCCcccccccCceeeecc-----CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87553311 112334579999987652 3467899999999999999999988743210
Q ss_pred ----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..+|.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 00123566788999999999999999999999998
No 223
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=2.2e-29 Score=260.92 Aligned_cols=234 Identities=17% Similarity=0.270 Sum_probs=190.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.+.++.|. | .||+++++.+++.|++|++..... .....+.+|+..++.++||||+++++.+..+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 69 (253)
T cd05122 1 LFEILEKIGKGGFG--EVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKK------- 69 (253)
T ss_pred CceeeeeeccCCce--EEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-------
Confidence 488999999987 7 899999999999999999986533 3456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...|+++||+ ++|.+++.... .......+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 70 -~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~~~~ 145 (253)
T cd05122 70 -DELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS-NGIIHRDIKAANILLTSDGEVKLIDFGLS 145 (253)
T ss_pred -CeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc-CCEecCCCCHHHEEEccCCeEEEeecccc
Confidence 3789999999 46888887653 122345577789999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-h--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-R-------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-~-------- 247 (778)
........ .........|+|||.+.+. .++.++|+|||||++|+|++|..|+..... .
T Consensus 146 ~~~~~~~~-------~~~~~~~~~~~~PE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 212 (253)
T cd05122 146 AQLSDTKA-------RNTMVGTPYWMAPEVINGK------PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN 212 (253)
T ss_pred cccccccc-------ccceecCCcccCHHHHcCC------CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc
Confidence 87754321 1112234589999998763 467789999999999999999988754310 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..+|.+||++.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~ 252 (253)
T cd05122 213 GPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHP 252 (253)
T ss_pred CCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 0112367789999999999999999999999997
No 224
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=1e-29 Score=270.00 Aligned_cols=240 Identities=21% Similarity=0.329 Sum_probs=189.5
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+++|.|+ | .||+|+.+.+|+.|+||.+......+.....+.+|+.+++.++||||+++++.+.... .
T Consensus 1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~ 72 (287)
T cd07840 1 YEKIAQIGEGTYG--QVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG------K 72 (287)
T ss_pred CeeeEEeccCCCe--EEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC------C
Confidence 78889999987 7 9999999999999999999876534444566889999999999999999999998642 1
Q ss_pred cEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..+|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++++|.+||+|||++..
T Consensus 73 ~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~i~~~i~~al~~LH~-~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~ 149 (287)
T cd07840 73 GSIYMVFEYMDHDLTGLLDSPEV--KFTESQIKCYMKQLLEGLQYLHS-NGILHRDIKGSNILINNDGVLKLADFGLARP 149 (287)
T ss_pred CcEEEEeccccccHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEEcCCCCEEEccccceee
Confidence 4899999999 578777765421 22344466779999999999995 8999999999999999999999999999987
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------- 247 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~------- 247 (778)
........ .........|+|||.+.+. ..++.++|+|||||++|||++|..+|..... .
T Consensus 150 ~~~~~~~~-----~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07840 150 YTKRNSAD-----YTNRVITLWYRPPELLLGA-----TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCG 219 (287)
T ss_pred ccCCCccc-----ccccccccccCCceeeEcc-----ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 75532100 0111234579999987642 2456789999999999999999988743210 0
Q ss_pred -------------------------------ccCC-CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------------------------NTAS-IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------------------------~~~~-iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.... ++..+.+++++||+.+|.+||++.++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~ 285 (287)
T cd07840 220 SPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE 285 (287)
T ss_pred CCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence 0011 266788899999999999999999999997
No 225
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1e-29 Score=269.54 Aligned_cols=237 Identities=17% Similarity=0.299 Sum_probs=190.4
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.+|.|. | .||.|+.+.+++.|+||++......+...+.+.+|+.+++.++||||+++++.++..
T Consensus 1 y~~~~~ig~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-------- 70 (282)
T cd07829 1 YEKLEKLGEGTYG--VVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-------- 70 (282)
T ss_pred CeeehcccccCcc--eEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--------
Confidence 67788899887 7 899999999999999999987653444456778899999999999999999999864
Q ss_pred cEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..+|+|+||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~~v~e~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDMDLKKYLDKRPG--PLSPNLIKSIMYQLLRGLAYCHS-HRILHRDLKPQNILINRDGVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCcCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChheEEEcCCCCEEEecCCcccc
Confidence 3899999999 579998887631 12344466679999999999995 8999999999999999999999999999887
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------------ 246 (778)
....... .........|+|||.+.+. ..++.++|+|||||++||+++|.++|.....
T Consensus 148 ~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 216 (282)
T cd07829 148 FGIPLRT------YTHEVVTLWYRAPEILLGS-----KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILG 216 (282)
T ss_pred cCCCccc------cCccccCcCcCChHHhcCC-----cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhC
Confidence 6542210 0111234479999998653 3567789999999999999999888753210
Q ss_pred -----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..+|.+||++.+++.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p 280 (282)
T cd07829 217 TPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP 280 (282)
T ss_pred CCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCc
Confidence 00123466788999999999999999999999998
No 226
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=6.5e-30 Score=268.53 Aligned_cols=236 Identities=17% Similarity=0.228 Sum_probs=186.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.+|.|+ | +||+|+.+. +..|++|++..... .....+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~~y~~~~~ig~g~~~--~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (261)
T cd05148 5 REEFTLERKLGSGYFG--EVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVG----- 74 (261)
T ss_pred HHHHHHhhhhccCCCc--cEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecC-----
Confidence 45799999999998 8 899999987 99999999876432 2345688999999999999999999998764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+|+.++.+||+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~-~~i~h~dl~~~nilv~~~~~~kl~d~g 149 (261)
T cd05148 75 ---EPVYIITELMEKGSLLAFLRSPEGQ-VLPVASLIDMACQVAEGMAYLEE-QNSIHRDLAARNILVGEDLVCKVADFG 149 (261)
T ss_pred ---CCeEEEEeecccCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccCcceEEEcCCceEEEcccc
Confidence 3799999999 4899999764321 22334455668999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------ 247 (778)
++......... ......+..|++||.... ..++.++|+|||||++|+|++ |..||......
T Consensus 150 ~~~~~~~~~~~------~~~~~~~~~~~~PE~~~~------~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05148 150 LARLIKEDVYL------SSDKKIPYKWTAPEAASH------GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI 217 (261)
T ss_pred chhhcCCcccc------ccCCCCceEecCHHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 99876442110 111223347999999865 356678999999999999998 77777432111
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 218 TAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred HhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 113466788999999999999999999998764
No 227
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=1.1e-29 Score=268.11 Aligned_cols=236 Identities=18% Similarity=0.160 Sum_probs=182.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+..+|++.+++|.|+ | +||.|+++.+ ..|+||++...... .+.+++|+..+++++||||+++++.++.
T Consensus 4 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~----- 72 (262)
T cd05071 4 PRESLRLEVKLGQGCFG--EVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE----- 72 (262)
T ss_pred ChHHeeEeeecCCCCCC--cEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC-----
Confidence 345799999999998 8 8999988755 46999998754322 3467889999999999999999988753
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 73 ----~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~Nill~~~~~~~L~df 146 (262)
T cd05071 73 ----EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADF 146 (262)
T ss_pred ----CCcEEEEEcCCCCcHHHHHhhcccc-CCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcccEEEcCCCcEEeccC
Confidence 2579999999 5899998763211 12233455569999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----h-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----~- 247 (778)
|++..+....... ......+..|++||+..+ ..++.++|+|||||++|+|++ |..||..... .
T Consensus 147 g~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~ 215 (262)
T cd05071 147 GLARLIEDNEYTA-----RQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 215 (262)
T ss_pred Cceeecccccccc-----ccCCcccceecCHhHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Confidence 9998765422100 111123347999998765 356789999999999999999 6667643211 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+|++.+|.+||++.++++-
T Consensus 216 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~ 256 (262)
T cd05071 216 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 256 (262)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 113467889999999999999999999988763
No 228
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=5.8e-30 Score=279.16 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=193.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | .||+|+...+|+.|+||.+..........+.+.+|+.+++.++||||+++++.+...... .
T Consensus 1 ~y~i~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~---~ 75 (330)
T cd07834 1 RYELLKPIGSGAYG--VVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPE---D 75 (330)
T ss_pred CceeeeeecCCCCe--EEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc---c
Confidence 589999999998 8 899999998999999999986543334556788999999999999999999998764211 1
Q ss_pred ccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...+|+||||+. +|.+++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~-~gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 76 FNDVYIVTELMETDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred ccceEEEecchhhhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 247899999994 6888876543 22344566779999999999995 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ ........++..|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 152 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 223 (330)
T cd07834 152 GVDPDEDE---KGFLTEYVVTRWYRAPELLLSS-----SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVL 223 (330)
T ss_pred eecccccc---cccccccccccCcCCceeeecc-----cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhc
Confidence 77553210 0011122344579999998763 25678999999999999999999887432100
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 224 GTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred CCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 0123566788899999999999999999999998
No 229
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=1.5e-29 Score=269.34 Aligned_cols=249 Identities=15% Similarity=0.218 Sum_probs=190.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
+..+|++.+.+|.|+ | .||.|+++.+++.|++|++.... .....+.+|+..++++ +||||+++++.+......
T Consensus 14 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 14 PAGIFELVEVVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPP 88 (282)
T ss_pred hhhhhhhheeeccCCCe--EEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccccc
Confidence 345799999999987 6 99999999999999999987642 2334678899999998 699999999998642210
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.....+|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|
T Consensus 89 --~~~~~~~iv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 89 --GHDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKEDWIAYICREILRGLAHLHA-HKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred --CCCCEEEEEEEeCCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEee
Confidence 1135899999999 4798888764322 23345567779999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-hh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-l~---- 247 (778)
||++......... .....+...|+|||++...-. ....++.++|+|||||++|||++|..||.... ..
T Consensus 165 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~l~~~~~-~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 165 FGVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred CcchhhhhccccC------CCcccccccccCHhhcCcccC-cCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 9998765432110 111234458999998753210 11346678999999999999999998874321 11
Q ss_pred --c-------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --N-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~-------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++.+||+.||.+||++.++++|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~ 280 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHP 280 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCC
Confidence 0 123577889999999999999999999999998
No 230
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2.7e-29 Score=268.58 Aligned_cols=238 Identities=17% Similarity=0.164 Sum_probs=188.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+++|.|. | .||.|.++.+++.|++|.+...... .....+.+|++++++++||||+++++.+..+.
T Consensus 2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 72 (287)
T cd06621 2 KIVELSRLGEGAGG--SVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDES------ 72 (287)
T ss_pred ceEEEEEeccCCce--EEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC------
Confidence 588899999998 7 8999999999999999999864332 34567889999999999999999999986543
Q ss_pred ccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS-RKIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEecCCeEEEeeccc
Confidence 34799999999 478887765321 1222344566779999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
+........ ........|++||.+.+ ..++.++|+|+|||++|+|++|..|+.....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 217 (287)
T cd06621 152 SGELVNSLA--------GTFTGTSFYMAPERIQG------KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL 217 (287)
T ss_pred ccccccccc--------ccccCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH
Confidence 876543211 01123457999999875 3567789999999999999999988754310
Q ss_pred h---c--c----------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R---N--T----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~---~--~----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. . . ...+..+.+++.+||..+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 218 SYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred HHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 0 0 0 01234578899999999999999999999998
No 231
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=9.8e-30 Score=273.29 Aligned_cols=236 Identities=17% Similarity=0.218 Sum_probs=190.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|+ | +||+|..+.++..|+||.+..... ...+.+.+|+.+++.++||||+++++.+...
T Consensus 17 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~---- 88 (293)
T cd06647 17 PKKKYTRFEKIGQGASG--TVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG---- 88 (293)
T ss_pred chhhceeeeEecCCCCe--EEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeC----
Confidence 456899999999998 7 999999998999999999875422 2345688999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+|+||+ ++|.+++.+... ....+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~-~gi~H~dL~p~Nili~~~~~~kL~df 159 (293)
T cd06647 89 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 159 (293)
T ss_pred ----CcEEEEEecCCCCcHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCEeeccCCHHHEEEcCCCCEEEccC
Confidence 3799999999 479888876432 233456679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~- 248 (778)
|++......... .....+...|++||.+.. ..++.++|+|||||++|++++|..||..... ..
T Consensus 160 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~ 227 (293)
T cd06647 160 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (293)
T ss_pred cceecccccccc------cccccCChhhcCchhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh
Confidence 998766442211 111233457999999865 2456789999999999999999998864321 10
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|..||++.+++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 228 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 123455688999999999999999999999997
No 232
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-31 Score=290.28 Aligned_cols=242 Identities=19% Similarity=0.259 Sum_probs=196.4
Q ss_pred CCCCceecc-----CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGD-----PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~-----~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
..|.|+..+ .+|.|. | +||-|+++.+...++||.+..+.. ...+-+..|+...++|+|.||++|++++..
T Consensus 568 iefeYeyde~~ervVLGKGTYG--~VYA~RD~~tqvrIaIKEIpekds--r~~QPLhEEIaLH~~LrHkNIVrYLGs~se 643 (1226)
T KOG4279|consen 568 IEFEYEYDESNERVVLGKGTYG--TVYAARDMDTQVRIAIKEIPEKDS--REVQPLHEEIALHSTLRHKNIVRYLGSVSE 643 (1226)
T ss_pred eEEEeeecCCCceEEeecCcee--EEEeeccccceeEEEeeecccccc--hhhccHHHHHHHHHHHhhHhHHHHhhccCC
Confidence 346777765 267777 8 999999999999999999986543 345678899999999999999999999865
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCc
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLD 167 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~ 167 (778)
+ .++-|.||.| |+|+.+|+..--.-...+..+.++..||++||+||| +..|||||||-+||+|+ -+|-
T Consensus 644 n--------Gf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH-en~IVHRDIKGDNVLvNTySGv 714 (1226)
T KOG4279|consen 644 N--------GFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH-ENKIVHRDIKGDNVLVNTYSGV 714 (1226)
T ss_pred C--------CeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh-hcceeeccccCCcEEEeeccce
Confidence 3 3899999999 689999987432222345567778999999999999 59999999999999998 7899
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh---h
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT---E 244 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~---~ 244 (778)
+||.|||-++.+...+.. .-.+.++.+|||||++..+- .+|..++|||||||.+.||.+|+|||-. .
T Consensus 715 lKISDFGTsKRLAginP~------TETFTGTLQYMAPEvIDqG~----RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp 784 (1226)
T KOG4279|consen 715 LKISDFGTSKRLAGINPC------TETFTGTLQYMAPEVIDQGP----RGYGKAADIWSFGCTMVEMATGRPPFVELGSP 784 (1226)
T ss_pred EEecccccchhhccCCcc------ccccccchhhhChHhhccCC----cCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence 999999999988764321 12345667999999998763 6899999999999999999999999831 1
Q ss_pred h--------hhccCCCCcchH----HHHHHHhccCCCCCCChHHHHhcc
Q 004025 245 E--------LRNTASIPKSLL----PDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 245 ~--------l~~~~~iP~~L~----~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ .+.-..||.++. ..+.+|+.++|..||++.++|+.+
T Consensus 785 qAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 785 QAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDP 833 (1226)
T ss_pred hHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence 1 112256787664 568899999999999999999987
No 233
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=2.8e-29 Score=268.63 Aligned_cols=249 Identities=17% Similarity=0.148 Sum_probs=189.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.+|.|. | .||+++.+.+++.|+||++..... ....+.+|+.+++.+ +||||+++++.+......
T Consensus 20 ~~~~y~~~~~l~~g~~~--~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYG--KVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCeEEEEEeecCCCe--EEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 456899999999998 8 899999999999999999875422 234577899999998 799999999998754311
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
....+|+||||+ ++|.++++.... ........+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 95 ---~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 95 ---VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN-NRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred ---CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCCCEEEe
Confidence 024799999999 478888865321 1223345567779999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~ 247 (778)
|||++......... .....+...|+|||++...- .....++.++|+|||||++|||++|.+||.... +.
T Consensus 171 dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~ 243 (291)
T cd06639 171 DFGVSAQLTSTRLR------RNTSVGTPFWMAPEVIACEQ-QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF 243 (291)
T ss_pred ecccchhccccccc------ccCccCCccccChhhhcCCC-CcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH
Confidence 99998876532111 11113345799999876421 001235679999999999999999998874321 11
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||..+|..||++.++++|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~ 288 (291)
T cd06639 244 KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHP 288 (291)
T ss_pred HHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCc
Confidence 1 112344578899999999999999999999998
No 234
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=2.6e-30 Score=272.78 Aligned_cols=235 Identities=20% Similarity=0.274 Sum_probs=175.5
Q ss_pred eeccCCCCCC-CceEEEEeEEC----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 22 NIGDPYPSAW-GSWSHFQGTSK----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 22 ~i~~~lg~g~-g~w~Vy~g~~k----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
++.+.||.|. | .||+|..+ ..+..|+||.+... ......+.+.+|++.+++++||||+++++++...
T Consensus 2 ~~~~~ig~G~fg--~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~----- 73 (259)
T PF07714_consen 2 KLIKQIGEGSFG--KVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN----- 73 (259)
T ss_dssp EEEEEEEEESSE--EEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----
T ss_pred EEeeEEccCCCc--EEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeeccccccccccccccccccccccc-----
Confidence 4567899998 8 89999988 44678999999543 3334467889999999999999999999999843
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+++||||+ ++|.++|....... .....+..++.||+.||.|||+ .+++||||++.|||++.++.+||+|||
T Consensus 74 ---~~~~lv~e~~~~g~L~~~L~~~~~~~-~~~~~~~~i~~~i~~~l~~Lh~-~~iiH~~l~~~nill~~~~~~Kl~~f~ 148 (259)
T PF07714_consen 74 ---EPLFLVMEYCPGGSLDDYLKSKNKEP-LSEQQRLSIAIQIAEALSYLHS-NNIIHGNLSPSNILLDSNGQVKLSDFG 148 (259)
T ss_dssp ---SSEEEEEE--TTEBHHHHHHHTCTTT-SBHHHHHHHHHHHHHHHHHHHH-TTEEEST-SGGGEEEETTTEEEEESTT
T ss_pred ---cccccccccccccccccccccccccc-cccccccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 2599999999 58999999872222 2233455569999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------h
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------L 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~-------l 246 (778)
+......... ............|+|||.+.+. .++.++||||||++|||+++ |..++.... +
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~ 218 (259)
T PF07714_consen 149 LSRPISEKSK----YKNDSSQQLPLRYLAPEVLKDG------EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL 218 (259)
T ss_dssp TGEETTTSSS----EEESTTSESGGGGS-HHHHHHS------EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH
T ss_pred cccccccccc----cccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccc
Confidence 9987733211 0011112233489999998774 36789999999999999999 566664311 1
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 ------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
.....+|..+.+++.+||..+|.+||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 219 KQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 112356778999999999999999999999875
No 235
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.97 E-value=1.8e-29 Score=264.83 Aligned_cols=234 Identities=14% Similarity=0.161 Sum_probs=181.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.+|.|+ | .||.++.+ ++..+++|.+...... ...+.+|+..|+.++||||++++++++..
T Consensus 4 ~~~~~~~~lg~G~~~--~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 71 (256)
T cd05114 4 SELTFMKELGSGQFG--VVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQ------ 71 (256)
T ss_pred HHcEEeeEecCCcCc--eEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccC------
Confidence 3589999999998 8 89999876 4668999988643222 34578899999999999999999998763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 --~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~kl~d~g~ 146 (256)
T cd05114 72 --KPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLER-NSFIHRDLAARNCLVSSTGVVKVSDFGM 146 (256)
T ss_pred --CCEEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcceEEEcCCCeEEECCCCC
Confidence 3799999999 579888875431 12344566779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----hc--
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----RN-- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----~~-- 248 (778)
+......... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||..... ..
T Consensus 147 ~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~ 215 (256)
T cd05114 147 TRYVLDDEYT-----SSSGAKFPVKWSPPEVFNF------SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMIS 215 (256)
T ss_pred ccccCCCcee-----ccCCCCCchhhCChhhccc------CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 8765432110 0111122347999999875 356779999999999999999 7877753211 11
Q ss_pred -------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+..+..++.+|+..+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 216 RGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 11234568899999999999999999999863
No 236
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=2.4e-29 Score=262.66 Aligned_cols=234 Identities=18% Similarity=0.225 Sum_probs=185.1
Q ss_pred cCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.||.|+ | .||+|..... +..|+||.+....... ....+.+|++.++.++||||+++++++... .
T Consensus 1 ~~ig~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--------~ 69 (262)
T cd00192 1 KKLGEGAFG--EVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEE--------E 69 (262)
T ss_pred CccccCCce--EEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCC--------C
Confidence 3577777 7 8999999876 8999999998654433 467789999999999999999999999863 3
Q ss_pred EEEEEecCC--cChHHHHHHhCc------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 101 TIYIVTEPV--MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|
T Consensus 70 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~nili~~~~~~~l~d 148 (262)
T cd00192 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS-KKFVHRDLAARNCLVGEDLVVKISD 148 (262)
T ss_pred ceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc-CCcccCccCcceEEECCCCcEEEcc
Confidence 899999999 579999887521 1223445567779999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----- 246 (778)
||++......... ........+..|+|||.+.+. .++.++|+|||||++|+|++ |..||.....
T Consensus 149 fg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 218 (262)
T cd00192 149 FGLSRDVYDDDYY----RKKTGGKLPIRWMAPESLKDG------IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLE 218 (262)
T ss_pred ccccccccccccc----ccccCCCcCccccCHHHhccC------CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 9999877653210 001112334589999998763 56789999999999999998 5777653211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+||..+|..||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 219 YLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1123467789999999999999999999999875
No 237
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=2.5e-29 Score=265.68 Aligned_cols=245 Identities=12% Similarity=0.136 Sum_probs=184.5
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
|.+++.+|.|+ | .||+|+.+.++. .|+||.+..........+.+.+|++.++.++||||+++++.+.......
T Consensus 1 ~~i~~~ig~G~~g--~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 76 (272)
T cd05075 1 LALGKTLGEGEFG--SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESE-- 76 (272)
T ss_pred CccccccCcccCc--eEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCccc--
Confidence 56889999998 8 899999887775 6999998765444555677889999999999999999998764322110
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcC---CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.....++++||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS-KSFIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhheEEcCCCCEEECC
Confidence 023679999999 5788877543321 112234455668999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----- 246 (778)
||++..+........ ......+..|++||...+ ..++.++|+|||||++|||++ |..||.....
T Consensus 156 fg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 225 (272)
T cd05075 156 FGLSKKIYNGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD 225 (272)
T ss_pred CCcccccCcccceec----CCcccCCcccCCHHHccC------CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999887654211000 011123347999999876 356789999999999999999 6777743211
Q ss_pred --h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....++..+.+++.+||..+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 226 YLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1 123456678899999999999999999999865
No 238
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=1.6e-29 Score=263.92 Aligned_cols=237 Identities=17% Similarity=0.223 Sum_probs=191.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|. | .||+++++.+++.|+||.+......+.....+.+|++.++.++||||+++++.+...
T Consensus 1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd08530 1 DFKVLKKLGKGSYG--SVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG------- 71 (256)
T ss_pred CceEeeeecCCCce--eEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-------
Confidence 489999999987 6 899999999999999999987554444456678899999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+|+||+ ++|..++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~-~~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 72 -NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE-QKILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred -CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEEecCCcEEEeeccc
Confidence 4899999999 4798888763321 122344566679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+....... .........|++||...+ ..++.++|+||||+++|+|++|..||.......
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~~Pe~~~~------~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 215 (256)
T cd08530 150 SKVLKKNM--------AKTQIGTPHYMAPEVWKG------RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR 215 (256)
T ss_pred hhhhccCC--------cccccCCccccCHHHHCC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 87765421 111233458999999865 356678999999999999999998886432211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|.+||++.++++||
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 216 GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 023456688999999999999999999999997
No 239
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.97 E-value=2.1e-29 Score=264.50 Aligned_cols=234 Identities=17% Similarity=0.182 Sum_probs=182.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.+|.|. | .||.|.++ ++..++||++...... ...+.+|+.+++.++||||+++++.++..
T Consensus 4 ~~~~~~~~lg~G~~~--~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 71 (256)
T cd05059 4 SELTFLKELGSGQFG--VVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQ------ 71 (256)
T ss_pred HHcchhhhhccCCCc--eEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCC------
Confidence 3589999999998 8 89999886 5778999998754322 23577899999999999999999998753
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ +.|.+++..... ......+..++.||+.||.|||+ .+++||||||+|||++.+|.+||+|||+
T Consensus 72 --~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~kl~dfg~ 146 (256)
T cd05059 72 --RPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLES-NGFIHRDLAARNCLVGEDNVVKVSDFGL 146 (256)
T ss_pred --CceEEEEecCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHhhEEECCCCcEEECCccc
Confidence 3789999999 469998876432 22344566779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------hh
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------LR 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~-------l~ 247 (778)
++...+..... ......+..|+|||.+.+ ..++.++|+|||||++|++++ |..||.... +.
T Consensus 147 ~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~ 215 (256)
T cd05059 147 ARYVLDDQYTS-----SQGTKFPVKWAPPEVFDY------SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS 215 (256)
T ss_pred ceecccccccc-----cCCCCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Confidence 87664321100 001112237999999876 356778999999999999998 677764321 11
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....|..+.+++.+||+.+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 216 AGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 112356779999999999999999999999864
No 240
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.2e-29 Score=270.81 Aligned_cols=237 Identities=17% Similarity=0.154 Sum_probs=191.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | +||++.++.+|+.|++|++.... .....+.+.+|+++++.++||||+++++.+...
T Consensus 3 ~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 75 (284)
T cd06620 3 RNEDLETISDLGAGNGG--SVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE---- 75 (284)
T ss_pred cHHHHHHHHHcCCCCCe--EEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC----
Confidence 345799999999998 7 99999999999999999987543 233456789999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|..++...+. .....+..++.|++.||.|||+..+++||||+|+||+++.++.++|+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~ 148 (284)
T cd06620 76 ----NNICMCMEFMDCGSLDRIYKKGGP---IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDF 148 (284)
T ss_pred ----CEEEEEEecCCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccC
Confidence 3899999999 478888876432 2344566779999999999996568999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++........ ....++..|+|||++.+. .++.++|+|||||++|++++|..||.....
T Consensus 149 gl~~~~~~~~~--------~~~~~~~~~~aPE~~~~~------~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~ 214 (284)
T cd06620 149 GVSGELINSIA--------DTFVGTSTYMSPERIQGG------KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD 214 (284)
T ss_pred Ccccchhhhcc--------CccccCcccCCHHHHccC------CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh
Confidence 99865532110 012345589999998653 566789999999999999999998853211
Q ss_pred --------hc-----c-----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------RN-----T-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------~~-----~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..+|..+.+++.+||..||..||++.++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 215 PMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00 0 12566788999999999999999999999997
No 241
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=2.3e-29 Score=267.55 Aligned_cols=241 Identities=18% Similarity=0.274 Sum_probs=185.8
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEecccccC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~~~g~ 96 (778)
|++.+.+|.|. | .||+|+++.+++.|+||++......+.....+.+|+..++++ +||||+++++++......+
T Consensus 1 y~~~~~l~~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~- 77 (287)
T cd07838 1 YEELAEIGEGAYG--TVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR- 77 (287)
T ss_pred CeEEEEecccCce--EEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC-
Confidence 78889999988 8 899999998999999999986544433344566777776665 5999999999998643211
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...+|++|||+ +.|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 78 --~~~~~l~~e~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al~~LH~-~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 78 --ELKLTLVFEHVDQDLATYLSKCPKP-GLPPETIKDLMRQLLRGVDFLHS-HRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred --CceeEEEehhcccCHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhEEEccCCCEEEeccCc
Confidence 23599999999 5788888764321 22344567779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+......... ....+...|++||++.+ ..++.++|+|||||++|+|++|.++|..... ..
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~~~PE~~~~------~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~ 220 (287)
T cd07838 154 ARIYSFEMAL-------TSVVVTLWYRAPEVLLQ------SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFD 220 (287)
T ss_pred ceeccCCccc-------ccccccccccChHHhcc------CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHH
Confidence 8876542110 11123457999999876 3566789999999999999999888753210 00
Q ss_pred --------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..+|.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~ 285 (287)
T cd07838 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHP 285 (287)
T ss_pred HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCc
Confidence 012345567789999999999999999999997
No 242
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=2.3e-29 Score=271.73 Aligned_cols=242 Identities=16% Similarity=0.183 Sum_probs=187.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.++.|. | .||++.++.+++.|+||.+...... ......+.+|+++++.++||||+++++.++.+
T Consensus 2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (305)
T cd05609 2 DFETIKLISNGAYG--AVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK------ 73 (305)
T ss_pred CceEeeEeecCCCe--eEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC------
Confidence 689999999998 7 8999999999999999998865322 23455778999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+||||+ ++|.++++.... .....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 74 --RHLCMVMEYVEGGDCATLLKNIGA---LPVDMARMYFAETVLALEYLHN-YGIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred --CEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHEEECCCCCEEEeeCCC
Confidence 4899999999 479999876542 2334455568899999999995 8999999999999999999999999998
Q ss_pred ccccCCCCCCC---------CCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 176 LSEFDGNNEAA---------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 176 a~~~~~~~~~~---------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
+.......... ..........+...|+|||.+.+ ..++.++|+|||||++||+++|..||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~vl~el~~g~~pf~~~~~ 221 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 221 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 76421110000 00000011233447999999765 3567889999999999999999988753211
Q ss_pred h----c-----------cCCCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 247 R----N-----------TASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 247 ~----~-----------~~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
. . ...+|..+.+++++||+.+|.+||+ +.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 222 EELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred HHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 1 0 1145777899999999999999998 68889997
No 243
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=1.7e-29 Score=267.71 Aligned_cols=243 Identities=14% Similarity=0.154 Sum_probs=186.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+...+|++.+.+|.|+ | .||.|..+.. +..|+||.+.... .......+.+|+.+|+.++||||++++++++
T Consensus 3 ~~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 3 LPREKITLIRELGQGSFG--MVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred cchHHeeEEeEecCCCCc--eEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 3456899999999998 8 8999988644 3789999986543 2233456789999999999999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcCC-------CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCe
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI 160 (778)
.. ...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||+|+||
T Consensus 80 ~~--------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~ni 150 (277)
T cd05032 80 TG--------QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA-KKFVHRDLAARNC 150 (277)
T ss_pred CC--------CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccChheE
Confidence 64 3799999999 58999987643211 11233455568999999999995 9999999999999
Q ss_pred EEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCC
Q 004025 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (778)
Q Consensus 161 ~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~ 239 (778)
+++.+|.+||+|||+++.+........ ......+..|+|||.+.+ ..++.++|+|||||++||+++ |..
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~ 220 (277)
T cd05032 151 MVAEDLTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKD------GVFTTKSDVWSFGVVLWEMATLAEQ 220 (277)
T ss_pred EEcCCCCEEECCcccchhhccCccccc----CCCCCccccccCHHHHhc------CCCCcccchHHHHHHHHHhhccCCC
Confidence 999999999999999887654221100 011123457999999865 356778999999999999998 777
Q ss_pred CCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 240 LSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 240 p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+|...... ....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 221 PYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred CCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 77432111 113456778899999999999999999998863
No 244
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=1.2e-29 Score=269.13 Aligned_cols=237 Identities=21% Similarity=0.291 Sum_probs=189.2
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.++.|. | .||+|+++.+|+.++||.+............+.+|+..|+.++||||+++++.+...
T Consensus 1 y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-------- 70 (283)
T cd05118 1 YQKLGKIGEGTYG--VVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-------- 70 (283)
T ss_pred CccceeeecCCCc--eEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--------
Confidence 67788899887 7 899999999999999999987654444566788999999999999999999998863
Q ss_pred cEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..+|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||++..
T Consensus 71 ~~~~~v~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~df~~~~~ 147 (283)
T cd05118 71 GDLYLVFEFMDTDLYKLIKDRQR--GLPESLIKSYLYQLLQGLAFCHS-HGILHRDLKPENLLINTEGVLKLADFGLARS 147 (283)
T ss_pred CCEEEEEeccCCCHHHHHHhhcc--cCCHHHHHHHHHHHHHHHHHHHH-CCeeecCcCHHHEEECCCCcEEEeeeeeeEe
Confidence 4899999999 578777766431 22334456679999999999995 8999999999999999999999999999887
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------------ 246 (778)
...... . .........|++||.+.+. ..++.++|+|||||++|+|++|+.+|.....
T Consensus 148 ~~~~~~----~--~~~~~~~~~~~~PE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~ 216 (283)
T cd05118 148 FGSPVR----P--YTHYVVTRWYRAPELLLGD-----KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLG 216 (283)
T ss_pred cCCCcc----c--ccCccCcccccCcHHHhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 755320 0 0112234479999998652 3567899999999999999999987743110
Q ss_pred -------hc-----------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -------RN-----------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -------~~-----------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||..+|.+||++.+++.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~ 281 (283)
T cd05118 217 TPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHP 281 (283)
T ss_pred CCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCC
Confidence 00 012556788899999999999999999999998
No 245
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97 E-value=1.8e-29 Score=265.46 Aligned_cols=236 Identities=16% Similarity=0.179 Sum_probs=183.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+++|.|+ | .||.|... ++..|+||.+.... ...+.+.+|+.++++++||||+++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g--~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 73 (261)
T cd05072 4 PRESIKLVKKLGAGQFG--EVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKE---- 73 (261)
T ss_pred chHHeEEeeecCCcCCc--eEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----
Confidence 345799999999998 7 89999865 56789999876432 2346788999999999999999999988753
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+++||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 74 ----~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~df 147 (261)
T cd05072 74 ----EPIYIITEYMAKGSLLDFLKSDEGGK-VLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANVLVSESLMCKIADF 147 (261)
T ss_pred ----CCcEEEEecCCCCcHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEecCCCcEEECCC
Confidence 3789999999 57999887643222 2233455568999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------ 246 (778)
|++.......... ......+..|+|||++.+. .++.++|+|||||++|+|++ |..||.....
T Consensus 148 g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 216 (261)
T cd05072 148 GLARVIEDNEYTA-----REGAKFPIKWTAPEAINFG------SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA 216 (261)
T ss_pred ccceecCCCceec-----cCCCccceecCCHHHhccC------CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH
Confidence 9998765421100 1111233479999998753 45678999999999999998 8877743211
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 -~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
. ....+|..+.+++.+|++.+|..||+++++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 217 LQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1 11346778999999999999999999998875
No 246
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=1.8e-29 Score=271.47 Aligned_cols=236 Identities=15% Similarity=0.184 Sum_probs=182.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
+|++.+.||.|+ | .||+|+.+.++. .++||.+... ......+.+.+|+.+++++ +||||+++++.++..
T Consensus 3 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~---- 75 (297)
T cd05089 3 DIKFEDVIGEGNFG--QVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENR---- 75 (297)
T ss_pred cceeeeeecCCCcc--eEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC----
Confidence 699999999998 8 899999988775 4688877632 2223456688999999999 799999999998763
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI 160 (778)
..+|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Ni 150 (297)
T cd05089 76 ----GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNV 150 (297)
T ss_pred ----CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceE
Confidence 3799999998 5799998764311 112234456679999999999995 9999999999999
Q ss_pred EEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCC
Q 004025 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (778)
Q Consensus 161 ~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~ 239 (778)
+++.++.+||+|||++...... ........+..|++||++.+ ..++.++|+|||||++|||++ |..
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~el~t~g~~ 217 (297)
T cd05089 151 LVGENLASKIADFGLSRGEEVY-------VKKTMGRLPVRWMAIESLNY------SVYTTKSDVWSFGVLLWEIVSLGGT 217 (297)
T ss_pred EECCCCeEEECCcCCCccccce-------eccCCCCcCccccCchhhcc------CCCCchhhHHHHHHHHHHHHcCCCC
Confidence 9999999999999998643221 00111122347999999865 356789999999999999997 888
Q ss_pred CCChhhhhc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 240 LSKTEELRN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 240 p~~~~~l~~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
||....... ...++..+.+++.+||..+|.+||+++++++.
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 218 PYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 874322110 12466778899999999999999999999765
No 247
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=2.5e-29 Score=267.35 Aligned_cols=230 Identities=16% Similarity=0.197 Sum_probs=181.4
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
||.|+ | +||.+.++.+|+.|+||++.++.... .....+.+|+++|+.++||||+++++.++.. ..+|+
T Consensus 1 lg~g~~g--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------~~~~l 70 (277)
T cd05577 1 LGKGGFG--EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK--------DDLCL 70 (277)
T ss_pred CCCCCce--eEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC--------CeEEE
Confidence 45666 7 89999999999999999998643221 2345667899999999999999999999864 38999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 71 VMTLMNGGDLKYHIYNVGEP-GFPEARAIFYAAQIICGLEHLHQ-RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred EEecCCCCcHHHHHHHcCcC-CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999 5799888765421 12344456668999999999995 99999999999999999999999999998765431
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------hc-------
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------RN------- 248 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~~------- 248 (778)
.. .........|++||.+.+. .++.++|+|||||++|+|++|..||..... ..
T Consensus 149 ~~-------~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd05577 149 KK-------IKGRAGTPGYMAPEVLQGE------VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAV 215 (277)
T ss_pred Cc-------cccccCCCCcCCHHHhcCC------CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccc
Confidence 11 1112234589999998763 467789999999999999999988753211 10
Q ss_pred --cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 --TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 --~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+|| ++.++++|+
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~ 255 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHP 255 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhCh
Confidence 124567789999999999999999 888899998
No 248
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=2.2e-29 Score=267.76 Aligned_cols=242 Identities=14% Similarity=0.161 Sum_probs=185.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...|.+.+.+|.|+ | .||+|..+. .+..|++|.+..... ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFG--EVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCC--cEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 35699999999998 8 899999987 678899998864322 22345678899999999999999999988763
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCC----CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEG----SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~----~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||+|+||+++.+
T Consensus 82 --------~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~ 152 (277)
T cd05036 82 --------LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCK 152 (277)
T ss_pred --------CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchheEEEecc
Confidence 3679999999 57999987754211 12233455679999999999995 899999999999999876
Q ss_pred C---cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 004025 166 L---DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (778)
Q Consensus 166 g---~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~ 241 (778)
| .+||+|||+++.+....... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~~g~~pf 222 (277)
T cd05036 153 GPGRVAKIADFGMARDIYRASYYR----KGGRAMLPIKWMPPEAFLD------GIFTSKTDVWSFGVLLWEIFSLGYMPY 222 (277)
T ss_pred CCCcceEeccCccccccCCcccee----cCCCCCccHhhCCHHHHhc------CCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 5 59999999998764321100 0001122347999999875 357789999999999999997 77777
Q ss_pred Chhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 242 KTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 242 ~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...... ....+|..+.+++.+||..+|..||++.+++++-
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l 275 (277)
T cd05036 223 PGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI 275 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence 532111 1134677889999999999999999999999863
No 249
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.8e-29 Score=277.71 Aligned_cols=240 Identities=15% Similarity=0.233 Sum_probs=189.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|. | +||.|.++.+|..|+||.+......+.....+.+|+.+|+.++||||++++++++.+...+
T Consensus 15 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 90 (343)
T cd07880 15 DRYRDLKQVGSGAYG--TVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD-- 90 (343)
T ss_pred cceEEEEEeeecCCe--EEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc--
Confidence 4699999999998 8 8999999999999999999765444444567889999999999999999999997643110
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||++ +|..++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~~~~----l~~~~~~~i~~qi~~al~~LH~-~gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 91 RFHDFYLVMPFMGTDLGKLMKHEK----LSEDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ccceEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 0135799999994 6777776433 2345567779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~---- 248 (778)
....... ....+...|++||++.+. ..++.++|+|||||++|++++|..||..... ..
T Consensus 166 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07880 166 RQTDSEM---------TGYVVTRWYRAPEVILNW-----MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKV 231 (343)
T ss_pred cccccCc---------cccccCCcccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7654321 111334589999998652 2456789999999999999999988753210 00
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||.+||++.+++.|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~ 299 (343)
T cd07880 232 TGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP 299 (343)
T ss_pred cCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 013455678889999999999999999999998
No 250
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=2.1e-29 Score=267.64 Aligned_cols=241 Identities=14% Similarity=0.173 Sum_probs=182.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
..+|++.+.+|.|+ | +||.|..+ .++..|+||++..... ......+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~~~~~~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFG--MVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCC--eEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 35699999999998 8 89998864 2356799999864322 23345678999999999999999999998753
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcC-------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
...|+||||+ ++|.+++...... .......+..++.|++.||.|||+ .+++||||||+||++
T Consensus 82 --------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~ 152 (277)
T cd05062 82 --------QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMV 152 (277)
T ss_pred --------CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEE
Confidence 3789999999 5799998764321 011123345568999999999995 899999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~ 241 (778)
+.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|||++ |..||
T Consensus 153 ~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~p~ 222 (277)
T cd05062 153 AEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPY 222 (277)
T ss_pred cCCCCEEECCCCCccccCCcceeec----CCCCccCHhhcChhHhhc------CCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999876543211000 001122347999999875 356788999999999999998 56666
Q ss_pred Chhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 242 KTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 242 ~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...... ....+|..+.+++.+||+.+|..||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 223 QGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 432111 113456678899999999999999999999865
No 251
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=2.6e-29 Score=263.68 Aligned_cols=232 Identities=18% Similarity=0.231 Sum_probs=183.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.+|.|+ | .||+|..+ |..|++|.+... ...+.+.+|+.++++++||||+++++.+..+
T Consensus 4 ~~~~~~~~~~lg~g~~~--~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 71 (256)
T cd05082 4 NMKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE---- 71 (256)
T ss_pred cHHhCeeeeeecccCCC--eEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC----
Confidence 345799999999998 8 89999875 889999998643 2245688999999999999999999876533
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...+|+|+||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 72 ---~~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~df 146 (256)
T cd05082 72 ---KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEA-NNFVHRDLAARNVLVSEDNVAKVSDF 146 (256)
T ss_pred ---CCceEEEEECCCCCcHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEeccccchheEEEcCCCcEEecCC
Confidence 23789999999 58999987654321 2234456668999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN---- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~---- 248 (778)
|++........ ....+..|+|||+..+ ..++.++|+|||||++|+|++ |..|+.......
T Consensus 147 g~~~~~~~~~~---------~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~ 211 (256)
T cd05082 147 GLTKEASSTQD---------TGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 211 (256)
T ss_pred ccceeccccCC---------CCccceeecCHHHHcc------CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99876543211 1112347999999876 356778999999999999997 877775432211
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|..+.+++.+|++.+|.+||++.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 212 VEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 13467789999999999999999999998764
No 252
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=3.2e-29 Score=263.07 Aligned_cols=231 Identities=15% Similarity=0.149 Sum_probs=179.1
Q ss_pred cCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
++||.|+ | .||+|+....+ ..|+||.+...... ...+.+.+|+++++++.||||++++++++. .
T Consensus 1 ~~ig~G~~g--~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------~ 68 (257)
T cd05060 1 KELGHGNFG--SVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG---------E 68 (257)
T ss_pred CccCccCce--eEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---------C
Confidence 4678887 7 89999876555 78999999865433 345678899999999999999999998763 2
Q ss_pred EEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+++.
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~nili~~~~~~kl~df~~~~~ 144 (257)
T cd05060 69 PLMLVMELAPLGPLLKYLKKRRE---IPVSDLKELAHQVAMGMAYLES-KHFVHRDLAARNVLLVNRHQAKISDFGMSRA 144 (257)
T ss_pred ceEEEEEeCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHhh-cCeeccCcccceEEEcCCCcEEeccccccce
Confidence 689999998 579999987552 2344566679999999999995 8999999999999999999999999999887
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-----------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----------- 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----------- 246 (778)
.......... ......+..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||.....
T Consensus 145 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~ 215 (257)
T cd05060 145 LGAGSDYYRA---TTAGRWPLKWYAPECINY------GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE 215 (257)
T ss_pred eecCCccccc---ccCccccccccCHHHhcC------CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC
Confidence 6542211000 001112247999999876 356779999999999999997 8888753211
Q ss_pred --hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+||..+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 216 RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1123456778899999999999999999998764
No 253
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=2.6e-29 Score=268.82 Aligned_cols=241 Identities=16% Similarity=0.200 Sum_probs=185.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+...+|.+.+.+|.|+ | +||.+..+ .++..|+||.+.... ......+.+|+..+++++||||+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 77 (288)
T cd05093 2 IKRHNIVLKRELGEGAFG--KVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCV 77 (288)
T ss_pred CchHHeeeccccCCcCCe--eEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 3456899999999998 8 89999853 345679999887542 334567889999999999999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC----------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~----------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
.. ..+|+|+||+ ++|.+++...+.. .......+..++.||+.||.|||+ .+++||||||
T Consensus 78 ~~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp 148 (288)
T cd05093 78 EG--------DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLAT 148 (288)
T ss_pred cC--------CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCc
Confidence 63 3899999999 5799998765421 112344566779999999999995 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
+||+++.+|.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|+|++
T Consensus 149 ~Nili~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~~l~t~ 218 (288)
T cd05093 149 RNCLVGENLLVKIGDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLWEIFTY 218 (288)
T ss_pred ceEEEccCCcEEeccCCccccccCCcee----ecCCCCCccccccCHHHhcc------CCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999999998766432110 00011122347999999876 356779999999999999998
Q ss_pred CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 237 GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 237 g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
|.+||...... ....+|..+.+++.+||+.||.+||++.+++.
T Consensus 219 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 219 GKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 77776432110 11346778999999999999999999998864
No 254
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=2.1e-29 Score=264.63 Aligned_cols=232 Identities=14% Similarity=0.159 Sum_probs=179.7
Q ss_pred CCCCCC-CceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
++|.|+ | +||+|.. +.++..|+||++..........+.+.+|+.+++.++||||+++++.++.+ ..
T Consensus 2 ~lg~G~~g--~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---------~~ 70 (257)
T cd05116 2 ELGSGNFG--TVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE---------SW 70 (257)
T ss_pred cCCCcCCc--ceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---------Cc
Confidence 578887 7 8999964 46688999999876544445567789999999999999999999987532 57
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||.||+++.++.+||+|||++....
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 71 MLVMELAELGPLNKFLQKNKH---VTEKNITELVHQVSMGMKYLEE-TNFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred EEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 9999998 579988876432 2234456669999999999995 899999999999999999999999999988765
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-------h-----
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------R----- 247 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l-------~----- 247 (778)
....... .......+..|+|||.+.. ..++.++|+|||||++|||++ |..||..... .
T Consensus 147 ~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~ 217 (257)
T cd05116 147 ADENYYK---AKTHGKWPVKWYAPECMNY------YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM 217 (257)
T ss_pred CCCCeee---ecCCCCCCccccCHhHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC
Confidence 4321100 0111122358999998765 356678999999999999997 8888753211 1
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+|++.||..||+++++.+.-
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l 252 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRL 252 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHH
Confidence 1134677889999999999999999999887653
No 255
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=7.3e-30 Score=280.72 Aligned_cols=248 Identities=17% Similarity=0.289 Sum_probs=194.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|. | +||.|+++.+++.|+||++............+.+|+.+++.++||||+++++.+..+...
T Consensus 14 ~~~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 89 (343)
T cd07851 14 PDRYQNLSPVGSGAYG--QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL-- 89 (343)
T ss_pred cCceEEEEEeccCCce--EEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc--
Confidence 34799999999987 7 999999999999999999876433334456678899999999999999999988654310
Q ss_pred CcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.....+|+|+||++ +|.+++.... .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 90 ~~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLMGADLNNIVKCQK----LSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccccEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEccccc
Confidence 01235899999994 6888877533 2344567779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+....... ....++..|+|||.+.+. ..++.++|+|||||++|++++|..||..... ..
T Consensus 165 ~~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~ 230 (343)
T cd07851 165 ARHTDDEM---------TGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMN 230 (343)
T ss_pred cccccccc---------cCCcccccccCHHHHhCC-----CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 88764321 112334579999997652 2466789999999999999999988742210 00
Q ss_pred ------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccccc
Q 004025 249 ------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQ 292 (778)
Q Consensus 249 ------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~ 292 (778)
...++..+.+++.+||+.+|.+||++.++++|+ |+..+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~----~~~~~~~ 306 (343)
T cd07851 231 LVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHP----YLAEYHD 306 (343)
T ss_pred hcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCC----CccccCC
Confidence 013466788899999999999999999999998 6655543
No 256
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=1.6e-29 Score=270.57 Aligned_cols=244 Identities=17% Similarity=0.236 Sum_probs=186.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~ 88 (778)
+...+|++.+.+|.|+ | .||+|..+.. ...|++|.+..... ......+.+|+.+++.+ +||||+++++.+
T Consensus 9 ~~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFG--QVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred cCHhHeEEeeEecccccc--cEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3456799999999998 7 8999987643 37899999875433 33455688999999999 799999999998
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCc-------------CCCcchHHHHHHHHHHHHHHHHHHcCCCcccc
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
..+ ..+|++|||+ ++|..++..... ........+..++.||+.||.|||+ .+++||
T Consensus 86 ~~~--------~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~ 156 (293)
T cd05053 86 TQE--------GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHR 156 (293)
T ss_pred cCC--------CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCcccc
Confidence 763 3799999999 579999876421 1112233455669999999999995 899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
||||+||+++.+|.+||+|||+++.+....... .......+..|+|||++.+ ..++.++|+|||||++||
T Consensus 157 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~e 226 (293)
T cd05053 157 DLAARNVLVTEDHVMKIADFGLARDIHHIDYYR----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLLWE 226 (293)
T ss_pred ccceeeEEEcCCCeEEeCcccccccccccccee----ccCCCCCCccccCHHHhcc------CCcCcccceeehhhHHHH
Confidence 999999999999999999999998765421100 0011112347999998765 356788999999999999
Q ss_pred HHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 234 LFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 234 l~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+++ |..++...... ....++..+.+++.+|+..+|..||++.++++..
T Consensus 227 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l 288 (293)
T cd05053 227 IFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL 288 (293)
T ss_pred HhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 997 77776432110 1134566788999999999999999999998753
No 257
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=2.1e-29 Score=264.87 Aligned_cols=235 Identities=14% Similarity=0.142 Sum_probs=182.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.+|.|+ | +||.|+.+ ++..|+||.+...... .+.+.+|+..+++++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~G~~~--~vy~~~~~-~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 71 (256)
T cd05113 3 PKDLTFLKELGTGQFG--VVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQ----- 71 (256)
T ss_pred hHHeEEeeEecCcccc--eEEEEEec-CCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccC-----
Confidence 34699999999998 8 89999876 3557999998754322 34578999999999999999999998753
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||
T Consensus 72 ---~~~~lv~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~nili~~~~~~kl~d~g 145 (256)
T cd05113 72 ---RPIYIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLES-KQFIHRDLAARNCLVDDQGCVKVSDFG 145 (256)
T ss_pred ---CCcEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCCCEEECCCc
Confidence 3789999999 479988876432 22344567779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------h
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------L 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~-------l 246 (778)
++......... .......+..|++||+..+. .++.++|+|||||++|+|++ |..||.... .
T Consensus 146 ~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~------~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~ 214 (256)
T cd05113 146 LSRYVLDDEYT-----SSVGSKFPVRWSPPEVLLYS------KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV 214 (256)
T ss_pred cceecCCCcee-----ecCCCccChhhCCHHHHhcC------cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 98766432110 01111223479999998753 46678999999999999998 877764211 1
Q ss_pred hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.+ ....+..+.+++.+||+.+|.+||++.+++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 215 SQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 11 12345678899999999999999999999865
No 258
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=1.8e-29 Score=268.88 Aligned_cols=239 Identities=17% Similarity=0.218 Sum_probs=182.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+|.+.+++|.|+ | +||+|+... ++..|+||++.... .....+.+.+|+.+++.++||||+++++.++..
T Consensus 6 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-- 80 (283)
T cd05091 6 TVRFMEELGEDRFG--KVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE-- 80 (283)
T ss_pred HHHHHHHhCCCCCC--eEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--
Confidence 588999999998 8 899998754 35789999997543 223456788999999999999999999998764
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCc-------------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
..+++++||+ ++|..++..... ........+..++.|++.||.|||+ .+++||||||+
T Consensus 81 ------~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~ 153 (283)
T cd05091 81 ------QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATR 153 (283)
T ss_pred ------CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-cCccccccchh
Confidence 3789999999 568888854221 0112233456679999999999995 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-C
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g 237 (778)
||+++.++.+||+|||+++......... .......+..|+|||.+.++ .++.++|+|||||++|||++ |
T Consensus 154 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~~g 223 (283)
T cd05091 154 NVLVFDKLNVKISDLGLFREVYAADYYK----LMGNSLLPIRWMSPEAIMYG------KFSIDSDIWSYGVVLWEVFSYG 223 (283)
T ss_pred heEecCCCceEecccccccccccchhee----eccCccCCccccCHHHHhcC------CCCcchhHHHHHHHHHHHHcCC
Confidence 9999999999999999988764321100 00111234579999998653 46778999999999999998 6
Q ss_pred CCCCChhhh----h---c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 238 MRLSKTEEL----R---N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 238 ~~p~~~~~l----~---~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
..++..... . . ...+|..+.+++.+|++.+|.+||++.+++..
T Consensus 224 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 224 LQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 666643211 1 1 13467778999999999999999999999875
No 259
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=2.3e-29 Score=299.78 Aligned_cols=243 Identities=13% Similarity=0.089 Sum_probs=186.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +...+.+.+|+++++.++||||+++++.+++.
T Consensus 2 grYeIi~~LGkGgfG--~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~----- 74 (932)
T PRK13184 2 QRYDIIRLIGKGGMG--EVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG----- 74 (932)
T ss_pred CCeEEEEEEecCCCE--EEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC-----
Confidence 3699999999998 8 9999999999999999999754322 23456788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcC--------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLE--------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~--------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 75 ---~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~dg 150 (932)
T PRK13184 75 ---DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS-KGVLHRDLKPDNILLGLFG 150 (932)
T ss_pred ---CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH-CCccccCCchheEEEcCCC
Confidence 3899999999 5799888753211 011122345568999999999996 8999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCC-----------CCccc-cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 167 DWKLHAFDVLSEFDGNNEAAN-----------GPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~-----------~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
.+||+|||++........... ..+.. ....++..|+|||++.+ ..++.++|+|||||++|||
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g------~~~S~kSDIWSLGVILyEL 224 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG------VPASESTDIYALGVILYQM 224 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC------CCCCcHhHHHHHHHHHHHH
Confidence 999999999987632111000 00001 11235568999999876 3567899999999999999
Q ss_pred HhCCCCCChhhhh---------------ccCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 235 FSGMRLSKTEELR---------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 235 ~tg~~p~~~~~l~---------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
++|..||...... ....+|..+.+++.+||..||.+|++..+.+
T Consensus 225 LTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 225 LTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred HHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999988543211 1135778899999999999999998764443
No 260
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=2.2e-29 Score=272.48 Aligned_cols=245 Identities=16% Similarity=0.174 Sum_probs=182.3
Q ss_pred CceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 20 ~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
.|.+++.+|.+ | .||.++.+.+++.|+||++............+.+|+++++.++||||+++++++..+
T Consensus 3 ~~~i~~~~~~~-~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~-------- 71 (314)
T cd08216 3 LTLIGKCFEDL-M--IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD-------- 71 (314)
T ss_pred hhhhhHhhcCC-c--eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--------
Confidence 35566665544 4 466677777999999999987544445677899999999999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|++|||+ +.|.+++....... .....+..+++||+.||.|||+ .+++||||||+||+++.+|.+||+||+.+.
T Consensus 72 ~~~~~~~e~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~l~~~L~~LH~-~~ivH~dlk~~Nili~~~~~~kl~d~~~~~ 149 (314)
T cd08216 72 SELYVVSPLMAYGSCEDLLKTHFPEG-LPELAIAFILKDVLNALDYIHS-KGFIHRSVKASHILLSGDGKVVLSGLRYSV 149 (314)
T ss_pred CeEEEEEeccCCCCHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCcceEEEecCCceEEecCccce
Confidence 3899999999 57888887643221 2345566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCc-cccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----hcc--
Q 004025 178 EFDGNNEAANGPM-LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----RNT-- 249 (778)
Q Consensus 178 ~~~~~~~~~~~~~-~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-----~~~-- 249 (778)
............. ..........|++||++.+.. ..++.++|+|||||++|||++|..||..... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~ 225 (314)
T cd08216 150 SMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNL----QGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRG 225 (314)
T ss_pred eeccccccccccccccccccccccccCHHHhcCCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 6643221100000 011112334799999986531 2466789999999999999999988753210 000
Q ss_pred ---------------C------------------------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ---------------A------------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ---------------~------------------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .+...+.+++.+||..||..||++.++++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 226 TVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred cCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0 0112355688999999999999999999998
No 261
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=1.8e-29 Score=271.88 Aligned_cols=234 Identities=17% Similarity=0.227 Sum_probs=187.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|+....||.|+ | .||.|.++.+++.|+||.+..+.. ...+.+.+|+.+++.++||||+++++.++.+
T Consensus 21 ~~~~~~~~ig~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~------ 90 (297)
T cd06659 21 SLLENYIKIGEGSTG--IVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVG------ 90 (297)
T ss_pred hhHHhhhhcCCCCce--eEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeC------
Confidence 4577777899888 8 899999999999999999976432 2345688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+|+||+ ++|..++..... ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 91 --~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~qi~~~L~~LH~-~~ivH~dl~p~Nill~~~~~~kL~dfg~ 163 (297)
T cd06659 91 --EELWVLMEFLQGGALTDIVSQTRL----NEEQIATVCESVLQALCYLHS-QGVIHRDIKSDSILLTLDGRVKLSDFGF 163 (297)
T ss_pred --CeEEEEEecCCCCCHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHeEEccCCcEEEeechh
Confidence 3899999999 468887765332 244566779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h-----
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L----- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l----- 246 (778)
+..+...... .....+...|+|||++.+ ..++.++|+|||||++|||++|..||.... +
T Consensus 164 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 231 (297)
T cd06659 164 CAQISKDVPK------RKSLVGTPYWMAPEVISR------TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 231 (297)
T ss_pred Hhhccccccc------ccceecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 8765432110 111234458999999876 356779999999999999999998874221 1
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||..+|.+||++.++++|+
T Consensus 232 ~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~ 272 (297)
T cd06659 232 SPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHP 272 (297)
T ss_pred cCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence 11234667789999999999999999999999997
No 262
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=3.6e-29 Score=264.08 Aligned_cols=239 Identities=16% Similarity=0.174 Sum_probs=185.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++.+.+|.|+ | +||+|+.+.+ ...|+||.+.... .......+.+|+..++.++||||+++++.++..
T Consensus 4 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 77 (266)
T cd05033 4 SYVTIEKVIGGGEFG--EVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS--- 77 (266)
T ss_pred HHceeeeEecCCccc--eEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC---
Confidence 4699999999998 8 8999998754 4579999987543 233455678899999999999999999998763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|
T Consensus 78 -----~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 -----RPVMIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSE-MNYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred -----CceEEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCCCEEECc
Confidence 3789999999 479998876432 12233445568999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE------ 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~------ 245 (778)
||++........ .........+..|++||.+.+ ..++.++|+|||||++|+|++ |..|+....
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~------~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~ 219 (266)
T cd05033 150 FGLSRRLEDSEA----TYTTKGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK 219 (266)
T ss_pred cchhhccccccc----ceeccCCCCCccccChhhhcc------CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH
Confidence 999988752211 111111223347999999876 356778999999999999997 877763211
Q ss_pred -h------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -L------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ......|..+.+++.+|++.+|..||++.+++++-
T Consensus 220 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l 262 (266)
T cd05033 220 AVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTL 262 (266)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1 01134577899999999999999999999998753
No 263
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.8e-29 Score=267.18 Aligned_cols=242 Identities=17% Similarity=0.286 Sum_probs=192.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~ 96 (778)
+|.+.+.+|.|+ | .||+|+.+.+|+.|+||++.++.. .......+.+|+.++++++ ||||++++++++..
T Consensus 2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~----- 74 (280)
T cd05581 2 DFKFGKIIGEGSFS--TVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE----- 74 (280)
T ss_pred CceEeeeecCCCce--EEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----
Confidence 699999999997 7 899999999999999999986432 2234567889999999999 99999999998763
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+|||++ ++|.+++..... .....+.+++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~ql~~~l~~Lh~-~~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 75 ---ENLYFVLEYAPNGELLQYIRKYGS---LDEKCTRFYAAEILLALEYLHS-KGIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred ---ceEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEecCCc
Confidence 4899999999 479999887642 2344567779999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCC--------------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 175 VLSEFDGNNEAANG--------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 175 la~~~~~~~~~~~~--------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
++............ ........++..|++||..... .++.++|+|||||++|++++|..|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK------PAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC------CCChhhhHHHHHHHHHHHHhCCCC
Confidence 98876543211000 0011112334589999987763 467789999999999999999988
Q ss_pred CChhhh----h----c----cCCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 241 SKTEEL----R----N----TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 241 ~~~~~l----~----~----~~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
+..... . . ...+|+.+.+++++||+.+|.+||++ .++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~ 278 (280)
T cd05581 222 FRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHP 278 (280)
T ss_pred CCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCC
Confidence 864211 1 1 13456778999999999999999999 9999997
No 264
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.9e-29 Score=277.36 Aligned_cols=247 Identities=19% Similarity=0.259 Sum_probs=187.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc-
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA- 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g- 95 (778)
..+|++.+.||.|+ | .||+|+++.+|..|+||++..+.. ...+.+.+|+++++.++||||+++++.+.......
T Consensus 4 ~~~y~~~~~Lg~g~~g--~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNG--LVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred CcceEEEEEecCCCCE--EEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc
Confidence 35799999999997 7 999999999999999999976543 33566889999999999999999998887542110
Q ss_pred -----CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCcE
Q 004025 96 -----TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDW 168 (778)
Q Consensus 96 -----~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~~ 168 (778)
......+|+|+||+ ++|..++.... .....+..++.||+.||.|||+ .+++||||||+||+++ .++.+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~~~~qi~~aL~~LH~-~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYMETDLANVLEQGP----LSEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccccccceEEEEeecccccHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCceE
Confidence 00013689999999 56777775433 2344566679999999999995 8999999999999998 55679
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--- 245 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--- 245 (778)
||+|||++..+........ . .....+...|+|||++.+. ..++.++|+|||||++|+|++|..||....
T Consensus 155 kl~dfg~~~~~~~~~~~~~--~-~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~ 226 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKG--Y-LSEGLVTKWYRSPRLLLSP-----NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE 226 (342)
T ss_pred EECCcccceecCCcccccc--c-cccccccccccCHHHHhCc-----cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999876643211100 0 0111234579999987543 346678999999999999999998874211
Q ss_pred -hh--------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -LR--------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l~--------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ....++..+.+++++||..+|.+||++.+++.|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~ 301 (342)
T cd07854 227 QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHP 301 (342)
T ss_pred HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCC
Confidence 00 0123456677899999999999999999999998
No 265
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=4.8e-29 Score=266.20 Aligned_cols=237 Identities=16% Similarity=0.229 Sum_probs=191.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.++.|. | .||.|.++.++..|+||++..... ..+.+.+|+..++.++||||+++++.+..+
T Consensus 17 ~~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 87 (286)
T cd06614 17 PRELYKNLEKIGEGASG--EVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVG---- 87 (286)
T ss_pred ccccchHhHhccCCCCe--EEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC----
Confidence 445699999999987 6 899999999999999999986433 355688999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+|+||+ ++|.+++.... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+||
T Consensus 88 ----~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~-~gi~H~dl~p~ni~i~~~~~~~l~d~ 160 (286)
T cd06614 88 ----DELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS-QNVIHRDIKSDNILLSKDGSVKLADF 160 (286)
T ss_pred ----CEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCChhhEEEcCCCCEEECcc
Confidence 3899999999 47999998764 112334456679999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h--
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~-- 247 (778)
|++.......... ........|++||++.+ ..++.++|+|||||++|+|++|..|+..... .
T Consensus 161 ~~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~ 228 (286)
T cd06614 161 GFAAQLTKEKSKR------NSVVGTPYWMAPEVIKR------KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI 228 (286)
T ss_pred chhhhhccchhhh------ccccCCcccCCHhHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9987654321100 11123457999999765 3467789999999999999999988753211 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++++||+.+|..||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 271 (286)
T cd06614 229 TTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP 271 (286)
T ss_pred HhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence 0123677899999999999999999999999997
No 266
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=1.7e-29 Score=295.73 Aligned_cols=249 Identities=20% Similarity=0.270 Sum_probs=186.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc----
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID---- 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~---- 94 (778)
+|+..+.+|.|+ | .||+++.|-||..||||++..+. .+.....+.+|++.|.+|+|||||+|+..+.+...+
T Consensus 480 DFEEL~lLGkGGFG--~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 480 DFEELELLGKGGFG--SVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhHHHHHhcCCCCc--eEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 577778899999 9 99999999999999999999876 556677899999999999999999999655322100
Q ss_pred ----------------------------------------------------------------------c---------
Q 004025 95 ----------------------------------------------------------------------A--------- 95 (778)
Q Consensus 95 ----------------------------------------------------------------------g--------- 95 (778)
|
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0
Q ss_pred ---------------------CCc-------ccEEEEEecCCc-C-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHH
Q 004025 96 ---------------------TST-------KITIYIVTEPVM-P-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145 (778)
Q Consensus 96 ---------------------~~~-------~~~lyIVtE~v~-~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH 145 (778)
+.. +.++||-||||. . |.+++.+..... +..+ .+..+.||++||.|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~-~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDE-AWRLFREILEGLAYIH 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHH-HHHHHHHHHHHHHHHH
Confidence 001 168999999994 4 555555544322 2233 4556999999999999
Q ss_pred cCCCccccccCCCCeEEcCCCcEEEEecccccccCC---C---CCC-----CCCCc-cccccccCCCCCCcccccccccc
Q 004025 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG---N---NEA-----ANGPM-LQYAWLVGAQYKPVELAKSDWTA 213 (778)
Q Consensus 146 ~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~---~---~~~-----~~~~~-~~~~~~~~~~Y~aPE~~~~~~~~ 213 (778)
+ .+||||||||.|||+++++.+||||||+++.... . ... ..... .....+++.-|+|||++.+.-.
T Consensus 715 ~-~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~- 792 (1351)
T KOG1035|consen 715 D-QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS- 792 (1351)
T ss_pred h-CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc-
Confidence 5 8899999999999999999999999999987321 0 000 00111 2233455668999999876311
Q ss_pred ccCCCCCcchhHHHHHHHHHHHhCCCCCChh--------hhhccCCCCcc----------hHHHHHHHhccCCCCCCChH
Q 004025 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--------ELRNTASIPKS----------LLPDYQRLLSSMPSRRLNSS 275 (778)
Q Consensus 214 ~~~~~~~~~DiwSLG~liyel~tg~~p~~~~--------~l~~~~~iP~~----------L~~~i~~lL~~dP~~Rps~~ 275 (778)
..|+.++||||||++++||+.. |.+. +++ ...||.. -..+++.|++.||.+|||+.
T Consensus 793 --~~Yn~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~ 866 (1351)
T KOG1035|consen 793 --NKYNSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTAT 866 (1351)
T ss_pred --ccccchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHH
Confidence 3688999999999999999973 5542 223 2455544 24568899999999999999
Q ss_pred HHHhcc
Q 004025 276 KLIENS 281 (778)
Q Consensus 276 ~lL~~~ 281 (778)
++|++.
T Consensus 867 eLL~s~ 872 (1351)
T KOG1035|consen 867 ELLNSE 872 (1351)
T ss_pred HHhhcc
Confidence 999985
No 267
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=6.1e-29 Score=264.95 Aligned_cols=249 Identities=15% Similarity=0.162 Sum_probs=188.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||+|+++.+++.|+||++..... ....+.+|+.+++.+ +||||+++++.+......
T Consensus 16 ~~~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 16 PSDTWEIIETIGKGTYG--KVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cccceeeeeeeccCCCc--EEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 456899999999998 8 899999999999999999864321 234578899999999 699999999987532111
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
....+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 91 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 91 ---NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV-NKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred ---CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh-CCccccCCCHHhEEECCCCCEEEc
Confidence 034899999999 478888765321 1222334466679999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~ 247 (778)
|||++........ ......++..|+|||++..... ....++.++|+|||||++|||++|..|+.... +.
T Consensus 167 dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~ 239 (286)
T cd06638 167 DFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQ-LDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF 239 (286)
T ss_pred cCCceeecccCCC------ccccccCCCcccChhhhchhhh-ccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh
Confidence 9999877643211 0111234558999999764210 11346779999999999999999998764321 11
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+..++.+||+.+|.+||++.++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 KIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1 012345688899999999999999999999997
No 268
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.96 E-value=3.2e-29 Score=265.05 Aligned_cols=238 Identities=15% Similarity=0.174 Sum_probs=186.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...+|++.+.+|.|+ | .||+|+.... ...|+||.+..... ....+.+.+|+.++++++||||+++++.++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~- 79 (270)
T cd05056 4 QREDITLGRCIGEGQFG--DVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITEN- 79 (270)
T ss_pred chhhceeeeeeCCccce--eEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-
Confidence 456799999999998 8 8999997644 35799998875432 33456789999999999999999999988752
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 80 --------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~~~H~dl~p~nili~~~~~~~l 148 (270)
T cd05056 80 --------PVWIVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLES-KRFVHRDIAARNVLVSSPDCVKL 148 (270)
T ss_pred --------CcEEEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccccChheEEEecCCCeEE
Confidence 578999999 579999876432 12344566679999999999995 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l--- 246 (778)
+|||++......... .......+..|+|||.+.. ..++.++|+|||||++||+++ |..||.....
T Consensus 149 ~d~g~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~ 217 (270)
T cd05056 149 GDFGLSRYLEDESYY-----KASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV 217 (270)
T ss_pred ccCceeeecccccce-----ecCCCCccccccChhhhcc------CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 999998776543110 0111122347999998765 356789999999999999986 8888743211
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+|+..+|.+||++.+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 218 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124567789999999999999999999998865
No 269
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=264.25 Aligned_cols=240 Identities=19% Similarity=0.261 Sum_probs=188.6
Q ss_pred Cceecc-CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccC
Q 004025 20 PYNIGD-PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~-~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~ 96 (778)
+|.|.. .||.|- | +|-.+.+|.+|+.+|+|++.. .+.+++|++..-.. -||||+.++|+|++.-.+
T Consensus 62 dY~is~qvLG~GinG--kV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~-- 130 (400)
T KOG0604|consen 62 DYSISWQVLGAGING--KVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENSYQG-- 130 (400)
T ss_pred hheehhhhhccccCC--ceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccC--
Confidence 577765 467777 8 899999999999999999863 34688888876655 499999999999864322
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g~~KL~ 171 (778)
...+.||||.+ |.|...|.+++..... +....-++.||+.|+.|||+ .+|.||||||+|++.+. +.-+||+
T Consensus 131 --rkcLLiVmE~meGGeLfsriq~~g~~afT-Erea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 131 --RKCLLIVMECMEGGELFSRIQDRGDQAFT-EREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred --ceeeEeeeecccchHHHHHHHHcccccch-HHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecCCCCcceEec
Confidence 57999999999 5699999887643322 33345569999999999995 99999999999999975 4459999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||+++.-...+.. ..-+.++.|.|||++.. ..|+..+|+||||++||-|++|.+||.+..-..
T Consensus 207 DfGFAK~t~~~~~L-------~TPc~TPyYvaPevlg~------eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp 273 (400)
T KOG0604|consen 207 DFGFAKETQEPGDL-------MTPCFTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_pred ccccccccCCCccc-------cCCcccccccCHHHhCc------hhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh
Confidence 99999877643221 11244668999999876 468889999999999999999999985432111
Q ss_pred ---------cCC--------CCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 249 ---------TAS--------IPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 249 ---------~~~--------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
.+. +++...++++.||..+|.+|+++.++++|+ |+..+-
T Consensus 274 gMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp----wi~~~~ 329 (400)
T KOG0604|consen 274 GMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP----WINQYE 329 (400)
T ss_pred hHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc----hhcccc
Confidence 123 345577889999999999999999999999 887654
No 270
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.96 E-value=4e-29 Score=265.77 Aligned_cols=233 Identities=18% Similarity=0.221 Sum_probs=187.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.||.|. | .||+|.++.++..|+||++...... .....+.+|++.+++++||||+++++.+..+
T Consensus 6 ~~~~~~ig~G~~~--~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 74 (277)
T cd06641 6 FTKLEKIGKGSFG--EVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-------- 74 (277)
T ss_pred hhhheeEeecCCe--EEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--------
Confidence 77888899887 7 9999999999999999998754332 3456788999999999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+||||+ ++|..++.... .....+.+++.|++.+|.|||+ .+++|+||+|+||+++.+|.++|+|||++.
T Consensus 75 ~~~~lv~e~~~~~~l~~~i~~~~----~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 75 TKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred CeEEEEEEeCCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHcc-CCeecCCCCHHhEEECCCCCEEEeecccce
Confidence 4899999999 46888886533 2345567779999999999995 999999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---------c
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------N 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------~ 248 (778)
.+...... .....+...|++||.+.+ ...+.++|+|||||++|+|++|..|+...... .
T Consensus 150 ~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 217 (277)
T cd06641 150 QLTDTQIK------RNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN 217 (277)
T ss_pred ecccchhh------hccccCCccccChhhhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC
Confidence 66432110 111123447999999865 24567899999999999999999887532110 0
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 254 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 123567788999999999999999999999997
No 271
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.96 E-value=3.4e-29 Score=281.23 Aligned_cols=243 Identities=17% Similarity=0.150 Sum_probs=185.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~ 88 (778)
.+...|++++.||.|+ | +||+|++... +..|+||++.... .....+.+.+|+++|+.|. ||||+++++++
T Consensus 34 ~~~~~~~~~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 34 FPRDGLVLGRILGSGAFG--KVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ccccceehhheecCCCCc--eEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 3566899999999998 8 9999987533 3469999997542 2334567899999999996 99999999999
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------------------------------------------
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------------------------------- 122 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------------------------------------- 122 (778)
... ..+||||||| ++|.++|......
T Consensus 111 ~~~--------~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (400)
T cd05105 111 TKS--------GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQ 182 (400)
T ss_pred ccC--------CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccc
Confidence 763 3799999999 6898888653210
Q ss_pred -------------------------------------------------CCcchHHHHHHHHHHHHHHHHHHcCCCcccc
Q 004025 123 -------------------------------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 123 -------------------------------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
.......+..++.||+.||.|||+ .+++||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~ 261 (400)
T cd05105 183 ADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHR 261 (400)
T ss_pred ccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCC
Confidence 001122345568999999999995 899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
||||+||+++.++.+||+|||++.......... ......++..|+|||++.+ ..++.++|+|||||++||
T Consensus 262 dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwSlGvil~e 331 (400)
T cd05105 262 DLAARNVLLAQGKIVKICDFGLARDIMHDSNYV----SKGSTFLPVKWMAPESIFD------NLYTTLSDVWSYGILLWE 331 (400)
T ss_pred CCChHhEEEeCCCEEEEEeCCcceecccccccc----ccCCcCCCcceEChhhhcC------CCCCchhhHHHHHHHHHH
Confidence 999999999999999999999988764321110 0111233457999999876 356789999999999999
Q ss_pred HHh-CCCCCChhh----h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 234 LFS-GMRLSKTEE----L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 234 l~t-g~~p~~~~~----l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|++ |..||.... . .....+|..+.+++.+||+.+|..||++.++.+.
T Consensus 332 llt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 393 (400)
T cd05105 332 IFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI 393 (400)
T ss_pred HHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence 997 777764321 1 1113467778999999999999999999888764
No 272
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=3.4e-29 Score=275.70 Aligned_cols=246 Identities=17% Similarity=0.282 Sum_probs=189.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|. | .||.|.++.+|+.|+||++.+........+.+.+|+.++++++||||+++++++...... .
T Consensus 17 ~~y~~~~~lg~G~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~--~ 92 (345)
T cd07877 17 ERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--E 92 (345)
T ss_pred CceEEEEEeeecCCe--EEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc--c
Confidence 5799999999998 8 899999999999999999986433333456688899999999999999999988643211 0
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+++|+++ +|..+++... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 93 ~~~~~~lv~~~~~~~L~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kl~dfg~~ 167 (345)
T cd07877 93 EFNDVYLVTHLMGADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLA 167 (345)
T ss_pred ccccEEEEehhcccCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEcCCCCEEEeccccc
Confidence 0236899999994 6877776433 2334466679999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~----- 247 (778)
....... ....++..|+|||.+.+. ..++.++|+|||||++|+|++|.+||.... +.
T Consensus 168 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (345)
T cd07877 168 RHTDDEM---------TGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 233 (345)
T ss_pred ccccccc---------cccccCCCccCHHHHhCc-----cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 7653311 112334579999987642 245678999999999999999998874211 00
Q ss_pred ----------------------cc------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 248 ----------------------NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 248 ----------------------~~------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
.+ ...+..+.+++.+||+.+|.+|+++.+++.|+ |+..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~----~f~~~~ 307 (345)
T cd07877 234 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA----YFAQYH 307 (345)
T ss_pred hCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh----hhhhcC
Confidence 00 02345577899999999999999999999998 555443
No 273
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=5.2e-29 Score=262.76 Aligned_cols=241 Identities=13% Similarity=0.194 Sum_probs=186.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.+|.|+ | .||.|+++.++..|+||.+..... .......+++|+..++.++||||+++++.+....
T Consensus 2 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-- 77 (264)
T cd06653 2 VNWRLGKLLGRGAFG--EVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE-- 77 (264)
T ss_pred CceeeeeeEccCCCe--EEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC--
Confidence 4799999999998 8 899999999999999999864321 2244567899999999999999999999987643
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|+++||+ ++|.+++...... ....+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|
T Consensus 78 ----~~~~~~v~e~~~~~~L~~~~~~~~~l---~~~~~~~~~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 78 ----EKKLSIFVEYMPGGSIKDQLKAYGAL---TENVTRRYTRQILQGVSYLHS-NMIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred ----CCEEEEEEEeCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEECc
Confidence 24789999999 4798888765421 233355568999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||+++.......... . .....+...|+|||++.+ ...+.++|+|||||++|++++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 220 (264)
T cd06653 150 FGASKRIQTICMSGT-G--IKSVTGTPYWMSPEVISG------EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK 220 (264)
T ss_pred cccccccccccccCc-c--ccccCCcccccCHhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999987643211000 0 011234457999999876 346678999999999999999998885321 110
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.+.+.+||. ++.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 221 IATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred HHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 12234456777889988 579999999999997
No 274
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.96 E-value=6.3e-29 Score=264.86 Aligned_cols=237 Identities=14% Similarity=0.165 Sum_probs=180.9
Q ss_pred ceeccCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
|.+.+.+|.|+ | +||.++ ...++..|+||.+..... ......+.+|++.|+.++||||+++++++....
T Consensus 6 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (283)
T cd05080 6 LKKIRVLGEGHFG--KVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQG--- 79 (283)
T ss_pred ceeceecccCCCc--EEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 48899999998 8 786654 456788999999876432 234566789999999999999999999887543
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...+|+||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 80 ---~~~~~lv~e~~~~~~l~~~~~~~~l----~~~~~~~i~~~l~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~df 151 (283)
T cd05080 80 ---GKGLQLIMEYVPLGSLRDYLPKHKL----NLAQLLLFAQQICEGMAYLHS-QHYIHRDLAARNVLLDNDRLVKIGDF 151 (283)
T ss_pred ---CceEEEEecCCCCCCHHHHHHHcCC----CHHHHHHHHHHHHHHHHHHHH-CCeeccccChheEEEcCCCcEEEeec
Confidence 34799999999 579988876442 334456679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------- 245 (778)
|++.......... .. ......+..|++||.+.+. ..+.++|+|||||++|||++|..|+....
T Consensus 152 g~~~~~~~~~~~~--~~-~~~~~~~~~~~~PE~~~~~------~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~ 222 (283)
T cd05080 152 GLAKAVPEGHEYY--RV-REDGDSPVFWYAVECLKEN------KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIG 222 (283)
T ss_pred ccccccCCcchhh--cc-CCCCCCCceeeCHhHhccc------CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhc
Confidence 9988765421100 00 0011223468999988753 46679999999999999999986653210
Q ss_pred ----------hh----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 ----------LR----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 ----------l~----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|..+.+++.+|++.+|..||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~ 277 (283)
T cd05080 223 PKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPI 277 (283)
T ss_pred ccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 00 012356788999999999999999999998863
No 275
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.96 E-value=6.3e-29 Score=258.92 Aligned_cols=239 Identities=23% Similarity=0.293 Sum_probs=193.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|+ | .||.+.+..++..|+||++............+.+|++.++.++|||++++++.+...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~------- 71 (258)
T cd08215 1 KYEIIKQIGKGSFG--KVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK------- 71 (258)
T ss_pred CceEEeeeccCCCe--EEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-------
Confidence 588999999987 6 899999999999999999987655445566788999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+|+|++ ++|.+++..... ........+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 72 -GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS-RKILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHHeEEcCCCcEEECCccc
Confidence 3899999999 479998887531 1222344466679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+........ . .....+...|+|||...+ ..++.++|+|+||+++|+|++|..++.......
T Consensus 150 ~~~~~~~~~-----~-~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 217 (258)
T cd08215 150 SKVLSSTVD-----L-AKTVVGTPYYLSPELCQN------KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK 217 (258)
T ss_pred eeecccCcc-----e-ecceeeeecccChhHhcc------CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence 887654320 0 111234457999998765 346778999999999999999998875432111
Q ss_pred --c----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+.+++||+.+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~ 256 (258)
T cd08215 218 GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSP 256 (258)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCC
Confidence 1 24567788999999999999999999999997
No 276
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=5.9e-29 Score=262.74 Aligned_cols=234 Identities=17% Similarity=0.204 Sum_probs=180.8
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
..+|.|+ | .||+|+++.++..|++|.+..+.. ...+.+.+|+++++.++||||+++++.+..+ ..+|
T Consensus 14 ~~lg~g~~g--~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------~~~~ 81 (268)
T cd06624 14 VVLGKGTYG--IVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNIVQYLGSDSEN--------GFFK 81 (268)
T ss_pred EEEecCCce--EEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCeeeeeeeeccC--------CEEE
Confidence 3577776 7 899999999999999999876432 3456788999999999999999999998764 3899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEecccccccC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLSEFD 180 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dFgla~~~~ 180 (778)
+|+||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++. ++.+||+|||++....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD-NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 999999 5799988764211111233455668999999999995 89999999999999976 7899999999987664
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----h------hcc
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L------RNT 249 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l------~~~ 249 (778)
..+.. .....++..|+|||++.+.. ..++.++|+||||+++|+|++|..|+.... . ...
T Consensus 161 ~~~~~------~~~~~~~~~~~aPE~~~~~~----~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 230 (268)
T cd06624 161 GINPC------TETFTGTLQYMAPEVIDKGP----RGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH 230 (268)
T ss_pred cCCCc------cccCCCCccccChhhhcccc----ccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccC
Confidence 32111 11123455899999976421 235678999999999999999998874311 0 011
Q ss_pred C----CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 A----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ~----~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .++..+..++++||..+|.+||++.+++.|+
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 266 (268)
T cd06624 231 PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDP 266 (268)
T ss_pred CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCC
Confidence 1 2445677889999999999999999999998
No 277
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=2.9e-29 Score=271.00 Aligned_cols=239 Identities=14% Similarity=0.162 Sum_probs=183.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCc--EEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP--VSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~--VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~ 93 (778)
-.+|++.+.+|.|+ | +||+|.++.++.. ++||.+... ........+.+|+.+++++ +||||++++++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g--~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~-- 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-- 80 (303)
T ss_pred hhhceeeeeecCCCCc--eEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC--
Confidence 34799999999998 8 9999999888765 466665532 2233456788999999999 899999999999764
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCC-------------CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEG-------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
..+|+|+||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+
T Consensus 81 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~ 153 (303)
T cd05088 81 ------GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAAR 153 (303)
T ss_pred ------CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh-CCccccccchh
Confidence 3799999999 57999987654211 12334466679999999999995 99999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-C
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g 237 (778)
||+++.++.+||+|||++....... .......+..|++||++.+ ..++.++|+|||||++|||++ |
T Consensus 154 Nili~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g 220 (303)
T cd05088 154 NILVGENYVAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLG 220 (303)
T ss_pred eEEecCCCcEEeCccccCcccchhh-------hcccCCCcccccCHHHHhc------cCCcccccchhhhhHHHHHHhcC
Confidence 9999999999999999986432110 0001112347999998865 346678999999999999998 8
Q ss_pred CCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 238 MRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 238 ~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..||...... ....++..+.+++.+||..+|..||++.++++..
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l 277 (303)
T cd05088 221 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 277 (303)
T ss_pred CCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 8877432111 1123567788999999999999999999998764
No 278
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=2.7e-29 Score=275.81 Aligned_cols=244 Identities=16% Similarity=0.173 Sum_probs=185.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
+..+|++.+.||.|+ | .||.|.+.. +++.|+||++..... ....+.+.+|+.+++++ +||||+++++.+.
T Consensus 5 ~~~~~~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 5 PRDRLKLGKPLGRGAFG--KVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred CHHHhhhhcccccCcCc--eEEeccccccccccccceeeeeeccCCCC-HHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 455799999999998 8 899997543 457899999975432 23456678899999999 7999999999886
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------------------------------
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (778)
.+ ...+|+++||+ ++|.++|......
T Consensus 82 ~~-------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (337)
T cd05054 82 KP-------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLS 154 (337)
T ss_pred cC-------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchh
Confidence 53 24799999999 5798888653210
Q ss_pred -------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCC
Q 004025 123 -------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189 (778)
Q Consensus 123 -------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~ 189 (778)
.......+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||++..+......
T Consensus 155 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~---- 229 (337)
T cd05054 155 DVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---- 229 (337)
T ss_pred hcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch----
Confidence 011233355668999999999995 99999999999999999999999999999876432110
Q ss_pred ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----h----hc------cCCCCc
Q 004025 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L----RN------TASIPK 254 (778)
Q Consensus 190 ~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l----~~------~~~iP~ 254 (778)
.......++..|+|||++.+ ..++.++|+|||||++|||++ |..||.... + .. ...++.
T Consensus 230 ~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (337)
T cd05054 230 VRKGDARLPLKWMAPESIFD------KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATP 303 (337)
T ss_pred hhccCCCCCccccCcHHhcC------CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCH
Confidence 00111122347999999876 367789999999999999997 887774311 1 11 123456
Q ss_pred chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 255 SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 255 ~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+.+++.+||+.+|..||++.+++++-
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l 330 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEIL 330 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 788899999999999999999999864
No 279
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.96 E-value=5.8e-29 Score=261.74 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=183.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|++.+.+|.|+ | .||+|... ++..|+||.+..... ..+.+.+|++.+++++||||++++++++..
T Consensus 5 ~~~~~~~~~lg~g~~~--~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 73 (261)
T cd05068 5 RTSIQLLRKLGAGQFG--EVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE----- 73 (261)
T ss_pred hhheeeEEEecccCCc--cEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecC-----
Confidence 45699999999998 8 89999975 457899999875432 234578899999999999999999988764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~dfg 148 (261)
T cd05068 74 ---EPIYIVTELMKYGSLLEYLQGGAG-RALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGENNICKVADFG 148 (261)
T ss_pred ---CCeeeeeecccCCcHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCcceEEEcCCCCEEECCcc
Confidence 3789999999 579999876541 112334456669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------ 247 (778)
++.......... ......+..|++||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 149 ~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05068 149 LARVIKEDIYEA-----REGAKFPIKWTAPEAALY------NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV 217 (261)
T ss_pred eEEEccCCcccc-----cCCCcCceeccCcccccc------CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 998775321100 001112247999998876 356778999999999999999 88777542111
Q ss_pred -c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ...+|..+.+++.+|++.+|..||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~ 257 (261)
T cd05068 218 DQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWK 257 (261)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 1 13456788999999999999999999998764
No 280
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=3.3e-29 Score=274.07 Aligned_cols=250 Identities=18% Similarity=0.260 Sum_probs=190.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCC--CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDD--GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~--g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g 95 (778)
+|++.+.||.|. | .||.++++.+ +..|+||.+..........+.+.+|+.+++.++ ||||+++++........
T Consensus 1 ~y~~~~~lg~G~~g--~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~- 77 (332)
T cd07857 1 RYELIKELGQGAYG--IVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN- 77 (332)
T ss_pred CceEEEEccccCCe--EEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc-
Confidence 589999999988 8 8999999988 899999998754333334556788999999995 99999999876532111
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+++|++ .+|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~~~~~e~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 78 ---FNELYLYEELMEADLHQIIRSGQP---LTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred ---CCcEEEEEecccCCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 24789999999 578888765332 2234466679999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++..+........ .......++..|+|||+..+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 151 ~a~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~ 223 (332)
T cd07857 151 LARGFSENPGENA--GFMTEYVATRWYRAPEIMLSF-----QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQIL 223 (332)
T ss_pred Cceeccccccccc--ccccCcccCccccCcHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHH
Confidence 9987654221111 011122445689999987653 3466789999999999999999988753210
Q ss_pred -----------h------------c------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 247 -----------R------------N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 247 -----------~------------~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
. . ...++..+.+++.+||+.+|..||++.+++.|+ |+..|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~----~~~~~ 298 (332)
T cd07857 224 QVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP----YLAIW 298 (332)
T ss_pred HHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh----hhhhh
Confidence 0 0 012456688899999999999999999999998 65443
No 281
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.96 E-value=5.7e-29 Score=266.31 Aligned_cols=239 Identities=13% Similarity=0.176 Sum_probs=182.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+|++.+.+|.|+ | +||+|+... ....|++|.+..... ......+.+|+.+++.++||||+++++.+..+
T Consensus 1 ~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 75 (290)
T cd05045 1 NLVLGKTLGEGEFG--KVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQD-- 75 (290)
T ss_pred CccccccccCcCCc--ceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--
Confidence 488999999998 8 899998753 235688888865432 23456788999999999999999999998764
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------CCcchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
...|+++||+ ++|.+++...... .......+..++.||+.||.|||+ .++
T Consensus 76 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i 148 (290)
T cd05045 76 ------GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE-MKL 148 (290)
T ss_pred ------CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence 3789999999 5799888753211 112234456679999999999995 999
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHH
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCL 230 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~l 230 (778)
+||||||+||+++.++.+||+|||+++......... .......+..|++||.+.+ ..++.++|+|||||+
T Consensus 149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~ 218 (290)
T cd05045 149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV----KRSKGRIPVKWMAIESLFD------HIYTTQSDVWSFGVL 218 (290)
T ss_pred ehhhhhhheEEEcCCCcEEeccccccccccCccchh----cccCCCCCccccCHHHHcc------CCcchHhHHHHHHHH
Confidence 999999999999999999999999987664322110 0111123457999998765 356788999999999
Q ss_pred HHHHHh-CCCCCChhhhhc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 231 IYELFS-GMRLSKTEELRN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 231 iyel~t-g~~p~~~~~l~~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+|||++ |..||....... ...++..+..++.+||+.+|.+||++.++++.
T Consensus 219 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 219 LWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE 282 (290)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 999998 877775322111 23456788999999999999999999998764
No 282
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96 E-value=6.4e-29 Score=260.35 Aligned_cols=232 Identities=15% Similarity=0.238 Sum_probs=179.7
Q ss_pred cCCCCCC-CceEEEEeEECCC-CC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDD-GS--PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~-g~--~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.+|.|+ | +||+|.++.+ +. .|+||.+...... ...+.+.+|++.+++++||||+++++.+.. .
T Consensus 1 ~~ig~g~~~--~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~-------- 68 (257)
T cd05040 1 KKLGDGSFG--VVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H-------- 68 (257)
T ss_pred CcCCccCcc--cEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--------
Confidence 3577777 7 8999998663 33 5899999865443 456778999999999999999999999875 2
Q ss_pred EEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||++..
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 69 PLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES-KRFIHRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred eEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh-CCccccccCcccEEEecCCEEEecccccccc
Confidence 789999998 589999887542 222334455568999999999995 8999999999999999999999999999987
Q ss_pred cCCCCCCCCCCcccc-ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChh---h-hh-----
Q 004025 179 FDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE---E-LR----- 247 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~---~-l~----- 247 (778)
+...... +... ....+..|+|||.+.+ ..++.++|+|||||++|||++ |..|+... + ..
T Consensus 147 ~~~~~~~----~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 216 (257)
T cd05040 147 LPQNEDH----YVMEEHLKVPFAWCAPESLRT------RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE 216 (257)
T ss_pred ccccccc----eecccCCCCCceecCHHHhcc------cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence 7542211 1011 1123347999998875 356778999999999999998 88887421 1 11
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+|+..+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 217 GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 112467788999999999999999999998864
No 283
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=4.5e-29 Score=261.42 Aligned_cols=235 Identities=16% Similarity=0.255 Sum_probs=182.7
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
+|.|. | .||.++++.+|+.|+||++...... ....+.+.+|+++++.++||||+++++.++.+ ..+|+
T Consensus 1 lg~g~~~--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--------~~~~l 70 (265)
T cd05579 1 ISKGAYG--RVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK--------KNLYL 70 (265)
T ss_pred CCCCCce--EEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC--------cEEEE
Confidence 35555 6 8999999999999999999764332 24566789999999999999999999998763 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
++||+ ++|..++...+. .....+..++.||+.||.|||. .+++||||+|+||+++.++.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~lH~-~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 71 VMEYLPGGDLASLLENVGS---LDEDVARIYIAEIVLALEYLHS-NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred EEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-cCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 99999 479999887542 2344466679999999999995 99999999999999999999999999998765432
Q ss_pred CCCCC--CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------
Q 004025 183 NEAAN--GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (778)
Q Consensus 183 ~~~~~--~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------ 248 (778)
..... .............|++||..... ..+.++|+|||||++|++++|..||.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQ------GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEW 220 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCC
Confidence 11000 00001112334589999998763 46678999999999999999998875332110
Q ss_pred --cCCCCcchHHHHHHHhccCCCCCCCh---HHHHhcc
Q 004025 249 --TASIPKSLLPDYQRLLSSMPSRRLNS---SKLIENS 281 (778)
Q Consensus 249 --~~~iP~~L~~~i~~lL~~dP~~Rps~---~~lL~~~ 281 (778)
...+|..+.+++++||+.+|.+||++ .++++|+
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~ 258 (265)
T cd05579 221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHP 258 (265)
T ss_pred CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCc
Confidence 11237788999999999999999999 9999998
No 284
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.96 E-value=6.6e-29 Score=260.86 Aligned_cols=237 Identities=16% Similarity=0.190 Sum_probs=185.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.+|.|+ | +||+|..+ ++..|+||.+..... ....+.+|+..++.++||||+++++.++.+
T Consensus 3 ~~~~~~~i~~~ig~g~~~--~v~~~~~~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 73 (261)
T cd05034 3 IPRESLKLERKLGAGQFG--EVWMGTWN-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE--- 73 (261)
T ss_pred cchhheeeeeeeccCcce--EEEEEEEc-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecC---
Confidence 3567899999999998 8 89999976 567899999875432 234688999999999999999999998763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|
T Consensus 74 -----~~~~~v~e~~~~~~L~~~i~~~~~~-~~~~~~~~~~~~~i~~al~~lh~-~~i~h~di~p~nili~~~~~~~l~d 146 (261)
T cd05034 74 -----EPIYIVTEYMSKGSLLDFLKSGEGK-KLRLPQLVDMAAQIAEGMAYLES-RNYIHRDLAARNILVGENLVCKIAD 146 (261)
T ss_pred -----CceEEEEeccCCCCHHHHHhccccC-CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcchheEEEcCCCCEEECc
Confidence 3789999999 5799988764311 22344466779999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----h
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----~ 247 (778)
||++..+...... .......+..|+|||.+.+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 147 ~g~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~ 215 (261)
T cd05034 147 FGLARLIEDDEYT-----AREGAKFPIKWTAPEAANY------GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLE 215 (261)
T ss_pred cccceeccchhhh-----hhhccCCCccccCHHHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9998776532100 0111122347999999876 356778999999999999998 8877743211 1
Q ss_pred c---------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 N---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 ~---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
. ....|..+.+++.+||..+|.+||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 216 QVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 1 1235678899999999999999999998875
No 285
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.96 E-value=7.9e-29 Score=264.04 Aligned_cols=241 Identities=16% Similarity=0.195 Sum_probs=183.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...|++.+.+|.|+ | +||.|.. ..++..|+||.+... .....+.+.+|+++|++++||||+++++.+....
T Consensus 3 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 78 (284)
T cd05081 3 ERHLKFIQQLGKGNFG--SVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 78 (284)
T ss_pred cccceeeeeccCCCCc--eEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC
Confidence 45799999999998 8 8999874 457889999998754 2334567889999999999999999999876433
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 79 ------~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~-~~i~H~dlkp~nili~~~~~~~l 149 (284)
T cd05081 79 ------RRNLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGS-KRYVHRDLATRNILVESENRVKI 149 (284)
T ss_pred ------CCceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHhhEEECCCCeEEE
Confidence 34789999999 589999875431 12233455568999999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++.......... ........+..|+|||+..+ ..++.++|+|||||++|||++|..++....
T Consensus 150 ~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 220 (284)
T cd05081 150 GDFGLTKVLPQDKEYY---KVREPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMR 220 (284)
T ss_pred CCCcccccccCCCcce---eecCCCCCceEeeCHHHhcc------CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhh
Confidence 9999998765422100 00011122336999999876 356779999999999999999754422110
Q ss_pred ------------------h------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 ------------------L------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 ------------------l------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+ .....+|..+.+++.+||..+|..||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 221 MMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred hcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 0 0012456779999999999999999999998864
No 286
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=1.3e-28 Score=267.26 Aligned_cols=235 Identities=16% Similarity=0.162 Sum_probs=184.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
|...+++|.|+ | +||+|+++.+|..|+||++...... ......+.+|++.++.++||||++++++++..
T Consensus 23 ~~~~~~lg~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 93 (313)
T cd06633 23 FVGLHEIGHGSFG--AVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE------- 93 (313)
T ss_pred hhcceeeccCCCe--EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-------
Confidence 66777899987 7 9999999999999999999864332 23445688899999999999999999999874
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+||||+ ++|..++...... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++.
T Consensus 94 -~~~~lv~e~~~~~l~~~l~~~~~~--l~~~~~~~~~~qi~~al~~LH~-~gi~H~dl~p~nili~~~~~~kL~dfg~~~ 169 (313)
T cd06633 94 -HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPGQVKLADFGSAS 169 (313)
T ss_pred -CEEEEEEecCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCChhhEEECCCCCEEEeecCCCc
Confidence 3899999999 5677777654321 2344456679999999999995 899999999999999999999999999876
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----c
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-----N 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~-----~ 248 (778)
.....+ ...+...|+|||++...- ...++.++|+|||||++|+|++|.+|+..... . .
T Consensus 170 ~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~ 236 (313)
T cd06633 170 KSSPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND 236 (313)
T ss_pred ccCCCC----------CccccccccChhhccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC
Confidence 432211 112345799999974210 02456789999999999999999988643211 0 0
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|.+||++.+++.|+
T Consensus 237 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~ 274 (313)
T cd06633 237 SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHD 274 (313)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 123556788999999999999999999999997
No 287
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.96 E-value=8.4e-29 Score=265.22 Aligned_cols=242 Identities=15% Similarity=0.148 Sum_probs=184.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCC----------------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG----------------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g----------------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP 79 (778)
...+|++.+++|.|+ | .||.|+....+ ..|++|.+..... ....+.+.+|++++++++||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~ 79 (296)
T cd05051 3 PRQPLNFVEKLGEGQFG--EVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFLKEVKILSRLSDP 79 (296)
T ss_pred chhhCcccccccCCCCc--cEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhcCCC
Confidence 456799999999998 8 89998876543 5689999875433 24466788999999999999
Q ss_pred CeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------CCcchHHHHHHHHHHHHHHHHHHcCCC
Q 004025 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (778)
Q Consensus 80 nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (778)
||+++++++..+ ..+|+++||+ ++|..++...... .......+..++.||+.||.|||+ .+
T Consensus 80 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~ 150 (296)
T cd05051 80 NIARLLGVCTVD--------PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES-LN 150 (296)
T ss_pred CEeEEEEEEecC--------CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Confidence 999999999864 3789999999 5799998765411 112334456679999999999995 89
Q ss_pred ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHH
Q 004025 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 150 ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~ 229 (778)
++|+||||+||+++.++.+||+|||++.......... .......+..|+|||++.+. .++.++|+|||||
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~ 220 (296)
T cd05051 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYR----VQGRAPLPIRWMAWESVLLG------KFTTKSDVWAFGV 220 (296)
T ss_pred ccccccchhceeecCCCceEEccccceeecccCccee----ecCcCCCCceecCHHHhhcC------CCCccchhhhhHH
Confidence 9999999999999999999999999987654321100 01111233479999998763 5678999999999
Q ss_pred HHHHHHh--CCCCCChh----hhhc----------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFS--GMRLSKTE----ELRN----------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~t--g~~p~~~~----~l~~----------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++|||++ +..|+... .+.. ...+|..+.+++.+||..+|.+||++.++++.
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 221 TLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999998 44555321 1110 12346779999999999999999999999764
No 288
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.96 E-value=7.9e-29 Score=264.05 Aligned_cols=241 Identities=15% Similarity=0.196 Sum_probs=185.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|.+.+++|.|+ | +||.+... .++..|++|.+.... ......+.+|++.++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (280)
T cd05092 3 KRRDIVLKWELGEGAFG--KVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTE 78 (280)
T ss_pred ChHhceeccccCCccCC--eEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence 345788999999998 8 89999743 356789999877532 3345678999999999999999999999876
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
. ...|++|||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|||||
T Consensus 79 ~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlk 149 (280)
T cd05092 79 G--------RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS-LHFVHRDLA 149 (280)
T ss_pred C--------CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH-CCeeccccc
Confidence 3 3789999999 5799998764321 112234466679999999999995 999999999
Q ss_pred CCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh
Q 004025 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (778)
Q Consensus 157 p~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t 236 (778)
|+||++++++.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||||++|||++
T Consensus 150 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~ 219 (280)
T cd05092 150 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYR----VGGRTMLPIRWMPPESILY------RKFTTESDIWSFGVVLWEIFT 219 (280)
T ss_pred HhhEEEcCCCCEEECCCCceeEcCCCceee----cCCCccccccccCHHHhcc------CCcCchhhHHHHHHHHHHHHc
Confidence 999999999999999999987654321100 0011122457999998876 356788999999999999998
Q ss_pred -CCCCCChhh----h---------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 237 -GMRLSKTEE----L---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 237 -g~~p~~~~~----l---------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|.+||.... . .....+|..+.+++.+||..+|.+||++.++++.
T Consensus 220 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~ 277 (280)
T cd05092 220 YGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSR 277 (280)
T ss_pred CCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 777773211 1 1123577889999999999999999999998753
No 289
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.96 E-value=7.1e-29 Score=260.95 Aligned_cols=237 Identities=17% Similarity=0.181 Sum_probs=184.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+....|++.+++|.|+ | .||+|..+ +++.|+||.+...... .+.+.+|+.++++++||||+++++.+..
T Consensus 3 ~~~~~~~~~~~ig~G~~g--~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 72 (260)
T cd05067 3 VPRETLKLVKKLGAGQFG--EVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ---- 72 (260)
T ss_pred cchHHceeeeeeccCccc--eEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc----
Confidence 4567899999999998 8 89999865 6788999998754332 3467889999999999999999988753
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|++|||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.++|+|
T Consensus 73 -----~~~~~v~e~~~~~~L~~~~~~~~~~~-~~~~~~~~i~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05067 73 -----EPIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIER-KNYIHRDLRAANILVSETLCCKIAD 145 (260)
T ss_pred -----CCcEEEEEcCCCCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHhc-CCeecccccHHhEEEcCCCCEEEcc
Confidence 2689999999 57998887643221 2233355568999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~---- 247 (778)
||++.......... ......+..|+|||++.+. .++.++|+|||||++||+++ |..||......
T Consensus 146 fg~~~~~~~~~~~~-----~~~~~~~~~y~~pe~~~~~------~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 214 (260)
T cd05067 146 FGLARLIEDNEYTA-----REGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ 214 (260)
T ss_pred CcceeecCCCCccc-----ccCCcccccccCHHHhccC------CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH
Confidence 99987765321100 0111223479999998753 56678999999999999998 88887532110
Q ss_pred ---c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ...+|..+.+++.+||+.+|..||++++++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 256 (260)
T cd05067 215 NLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSV 256 (260)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 1 13456779999999999999999999988753
No 290
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.96 E-value=5.5e-29 Score=264.67 Aligned_cols=243 Identities=17% Similarity=0.181 Sum_probs=188.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...+|++.+.+|.|+ | .||.|.++. .+..|++|.+... ........+.+|+.+++.|+||||+++++++..+
T Consensus 4 ~~~~~~~~~~i~~g~~g--~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFG--RIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred chhheEEeeeecccCCc--eEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456799999999998 8 899999876 2578999988643 3334567788999999999999999999987653
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcC-----CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~ 164 (778)
. ...|+++||+ ++|..++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.
T Consensus 81 ~-------~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~ 152 (280)
T cd05043 81 G-------EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDE 152 (280)
T ss_pred C-------CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcC
Confidence 2 3689999998 5799998765322 223344466679999999999995 99999999999999999
Q ss_pred CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCh
Q 004025 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT 243 (778)
Q Consensus 165 ~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~ 243 (778)
++.+||+|||+++.+....... ..........|+|||++.+ ..++.++|+|||||++||+++ |..||..
T Consensus 153 ~~~~kl~d~g~~~~~~~~~~~~----~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~ 222 (280)
T cd05043 153 ELQVKITDNALSRDLFPMDYHC----LGDNENRPVKWMALESLVN------KEYSSASDVWSFGVLLWELMTLGQTPYVE 222 (280)
T ss_pred CCcEEECCCCCcccccCCceEE----eCCCCCcchhccCHHHHhc------CCCCchhhHHHhHHHHHHHhcCCCCCcCc
Confidence 9999999999987664321100 0011122347999999875 356789999999999999998 8888753
Q ss_pred hhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 244 EEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 244 ~~l-------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
... .....+|..+.+++.+|+..+|.+||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 272 (280)
T cd05043 223 IDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQC 272 (280)
T ss_pred CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 211 1113457789999999999999999999998864
No 291
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=5.7e-29 Score=272.21 Aligned_cols=245 Identities=16% Similarity=0.196 Sum_probs=185.8
Q ss_pred CCCce-eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh------------HHHHHHHHHHHHhcCCCCCeee
Q 004025 18 DLPYN-IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG------------HLAAARNGVKRLRTVRHPNILA 83 (778)
Q Consensus 18 ~~~Y~-i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~------------~~~~~~~ev~~Lk~LrHPnIlk 83 (778)
..+|. +.+.||.|+ | +||+|.++.+++.|+||++........ ....+.+|++++++++||||++
T Consensus 7 ~~ry~~~~~~ig~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 84 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYG--KVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG 84 (335)
T ss_pred ccchhhhhhcccCCCce--eEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence 34675 457799987 7 899999999999999999875432210 1124678999999999999999
Q ss_pred EeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 84 FLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 84 ~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
+++++..+ ..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||++
T Consensus 85 ~~~~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~-~~i~H~dl~~~nill 152 (335)
T PTZ00024 85 LVDVYVEG--------DFINLVMDIMASDLKKVVDRKIR---LTESQVKCILLQILNGLNVLHK-WYFMHRDLSPANIFI 152 (335)
T ss_pred eeEEEecC--------CcEEEEEeccccCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHeEE
Confidence 99999864 3899999999 678888865432 2334456679999999999995 999999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCC--------CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAAN--------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~--------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
+.+|.+||+|||++........... .............|+|||.+.+. ..++.++|+|||||++|+|
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-----EKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccC-----CCCCcHHHHHHHHHHHHHH
Confidence 9999999999999887652211000 00000111234479999998653 2457789999999999999
Q ss_pred HhCCCCCChhh----hh------------------------------------ccCCCCcchHHHHHHHhccCCCCCCCh
Q 004025 235 FSGMRLSKTEE----LR------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNS 274 (778)
Q Consensus 235 ~tg~~p~~~~~----l~------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~ 274 (778)
++|.++|.... +. .....+..+.+++++||..+|..||++
T Consensus 228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 99998875321 00 001235567889999999999999999
Q ss_pred HHHHhcc
Q 004025 275 SKLIENS 281 (778)
Q Consensus 275 ~~lL~~~ 281 (778)
++++.|+
T Consensus 308 ~~~l~~~ 314 (335)
T PTZ00024 308 KEALKHE 314 (335)
T ss_pred HHHhcCc
Confidence 9999998
No 292
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.96 E-value=9.4e-29 Score=259.19 Aligned_cols=232 Identities=18% Similarity=0.265 Sum_probs=185.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | .||+|... |+.|+||.+..... ..+.+.+|+.+++.++||||+++++.+..+
T Consensus 4 ~~~~~~~~~~ig~g~~g--~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 72 (256)
T cd05039 4 NSKELKLGATIGKGEFG--DVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQG---- 72 (256)
T ss_pred ChhhccceeeeecCCCc--eEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCC----
Confidence 345799999999998 8 89999875 89999999976432 456788999999999999999999998863
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+||||+ ++|.++++..... ......+..++.|++.||.|||+ .+++|+||+|+||+++.+|.+||+||
T Consensus 73 ----~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~Nili~~~~~~~l~d~ 146 (256)
T cd05039 73 ----NPLYIVTEYMAKGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEE-KNFVHRDLAARNVLVSEDLVAKVSDF 146 (256)
T ss_pred ----CCeEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCccchhcccceEEEeCCCCEEEccc
Confidence 3789999999 4799998765421 12344466669999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN---- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~---- 248 (778)
|++........ ....+..|++||.+.++ .++.++|+|||||++|++++ |..||.......
T Consensus 147 g~~~~~~~~~~---------~~~~~~~~~ape~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~ 211 (256)
T cd05039 147 GLAKEASQGQD---------SGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPH 211 (256)
T ss_pred ccccccccccc---------cCCCcccccCchhhcCC------cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99987643211 11223479999988653 45678999999999999997 877764322111
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|..+.+++.+||..+|.+||++.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 212 VEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 13467789999999999999999999998864
No 293
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=7.5e-29 Score=266.40 Aligned_cols=245 Identities=15% Similarity=0.128 Sum_probs=185.5
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
.+...+|++.+.+|.|. | +||+|+++.+++.|+||.+....... ....+..|+..+..+. ||||+++++.+.++
T Consensus 11 ~~~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~- 86 (296)
T cd06618 11 PADLNDLENLGEIGSGTCG--QVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITD- 86 (296)
T ss_pred cCCcchheeeeEeeccCCe--EEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecC-
Confidence 34556799999999997 7 99999999999999999998653333 2344555666665654 99999999999864
Q ss_pred cccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 93 IDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+|+||||++ .|..++..... ......+..++.||+.||.|||+..+++||||+|+||+++.++.+||+
T Consensus 87 -------~~~~~v~e~~~~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~ 157 (296)
T cd06618 87 -------SDVFICMELMSTCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLC 157 (296)
T ss_pred -------CeEEEEeeccCcCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEEC
Confidence 38999999995 45555544321 223344556699999999999964699999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----EL 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l 246 (778)
|||++..+..... .........|++||.+.+.-. ...++.++|+|||||++|+|++|..||... .+
T Consensus 158 dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~ 228 (296)
T cd06618 158 DFGISGRLVDSKA-------KTRSAGCAAYMAPERIDPPDP--NPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVL 228 (296)
T ss_pred ccccchhccCCCc-------ccCCCCCccccCHhhcCCCCC--ccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHH
Confidence 9999876643211 111123457999999865210 123567899999999999999999888541 11
Q ss_pred hc-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RN-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||+.+|..||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 229 TKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 10 013566789999999999999999999999997
No 294
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=8.1e-29 Score=268.71 Aligned_cols=242 Identities=16% Similarity=0.232 Sum_probs=183.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeee
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~ 87 (778)
+..+|.+++.+|.|+ | .||.|+.. ..+..|++|.+..... ......+.+|+++++.+ +||||++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 10 PRDRLVLGKPLGEGCFG--QVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred cHHHeeeeeeecCCCcc--cEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 445799999999998 8 89999763 2345799999875433 33456688999999999 69999999999
Q ss_pred eEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
+..+ ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 87 ~~~~--------~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H 157 (314)
T cd05099 87 CTQE--------GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIH 157 (314)
T ss_pred EccC--------CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH-CCeee
Confidence 8763 3799999999 5899999764311 112223345568999999999995 99999
Q ss_pred cccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 153 ~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
|||||+||+++.+|.+||+|||+++.......... ......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~ 227 (314)
T cd05099 158 RDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK----TSNGRLPVKWMAPEALFD------RVYTHQSDVWSFGILMW 227 (314)
T ss_pred ccccceeEEEcCCCcEEEccccccccccccccccc----cccCCCCccccCHHHHcc------CCcCccchhhHHHHHHH
Confidence 99999999999999999999999987653211000 011112247999999876 35678999999999999
Q ss_pred HHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 233 ELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 233 el~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+|++ |..||...... ....+|..+.+++.+||+.+|..||++.++++.
T Consensus 228 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 289 (314)
T cd05099 228 EIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA 289 (314)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9998 66666432110 113456678899999999999999999998864
No 295
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.96 E-value=7.7e-29 Score=266.19 Aligned_cols=242 Identities=14% Similarity=0.159 Sum_probs=182.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCC--------------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG--------------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI 81 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g--------------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnI 81 (778)
+..+|++.++||.|+ | .||.+++...+ ..|+||.+.... .......+.+|+++|++++||||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i 79 (295)
T cd05097 3 PRQQLRLKEKLGEGQFG--EVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNI 79 (295)
T ss_pred chHhCeehhccCCCCCc--eEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCc
Confidence 456799999999999 8 89998875432 248999987542 23345578899999999999999
Q ss_pred eeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCC---------CcchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 82 LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG---------SQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 82 lk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~---------~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
+++++++... ..+|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .++
T Consensus 80 ~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i 150 (295)
T cd05097 80 IRLLGVCVSD--------DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNF 150 (295)
T ss_pred CeEEEEEcCC--------CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCe
Confidence 9999999763 3789999999 47988886543110 12234456679999999999995 899
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHH
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCL 230 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~l 230 (778)
+||||||+||+++.++.+||+|||++......... ........+..|+|||+..++ .++.++|+|||||+
T Consensus 151 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwSlG~~ 220 (295)
T cd05097 151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVT 220 (295)
T ss_pred eccccChhhEEEcCCCcEEecccccccccccCcce----eccCcCcCceeecChhhhccC------CcCchhhHHHHHHH
Confidence 99999999999999999999999998765432110 000011223479999988753 46789999999999
Q ss_pred HHHHHh--CCCCCChh---h-hh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 231 IYELFS--GMRLSKTE---E-LR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 231 iyel~t--g~~p~~~~---~-l~----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+|+|++ +..+|... + +. ....+|..+.+++.+|+..+|.+||++.++++.
T Consensus 221 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 221 LWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred HHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 999998 44555321 1 00 012356779999999999999999999998763
No 296
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=2.2e-28 Score=265.73 Aligned_cols=237 Identities=15% Similarity=0.137 Sum_probs=186.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.-|++.+.+|.|+ | .||+|+++.+|..|+||.+..... .......+.+|+++++.++||||+++++++..+
T Consensus 25 ~~f~~~~~lg~G~~~--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 97 (317)
T cd06635 25 KLFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE----- 97 (317)
T ss_pred hhhhhhheeccCCCe--EEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----
Confidence 3488888999997 7 899999999999999999875432 224456788999999999999999999999864
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...||||||+ ++|.+.+...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 98 ---~~~~lv~e~~~g~l~~~~~~~~~~--l~~~~~~~i~~~i~~~l~~lH~-~~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 98 ---HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred ---CeEEEEEeCCCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcccEEECCCCCEEEecCCC
Confidence 3789999999 5677776543321 2344566679999999999995 8999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+....... ...+...|++||++...- ....+.++|+|||||++|||++|..||..... ..
T Consensus 172 ~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 238 (317)
T cd06635 172 ASIASPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 238 (317)
T ss_pred ccccCCcc----------cccCCccccChhhhhcCC---CCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence 86543311 112345799999974210 02456789999999999999999987643211 00
Q ss_pred -------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|..||++.++++|+
T Consensus 239 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 239 NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 123456688999999999999999999999997
No 297
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.96 E-value=7.4e-29 Score=261.00 Aligned_cols=235 Identities=17% Similarity=0.172 Sum_probs=180.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.++||.|+ | .||+|..+.+ ..|+||.+..... ..+.+.+|+++++.++||||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 72 (260)
T cd05069 4 PRESLRLDVKLGQGCFG--EVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE----- 72 (260)
T ss_pred ChHHeeeeeeecCcCCC--eEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----
Confidence 445799999999998 8 8999987654 4699998764322 23567889999999999999999988753
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 73 ----~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 73 ----EPIYIVTEFMGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIER-MNYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred ----CCcEEEEEcCCCCCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCCeEEECCC
Confidence 2579999999 4799998764321 12334455668999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------ 246 (778)
|++......... .......+..|++||...+ ..++.++|+|||||++|||++ |..||.....
T Consensus 147 g~~~~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05069 147 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ 215 (260)
T ss_pred ccceEccCCccc-----ccCCCccchhhCCHHHhcc------CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999776432110 0111123347999998765 356778999999999999999 7777743211
Q ss_pred -hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 -RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 -~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
.. ...+|..+.+++++||..+|.+||+++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 216 VERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11 1235677899999999999999999998875
No 298
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.96 E-value=1.2e-28 Score=257.47 Aligned_cols=235 Identities=17% Similarity=0.239 Sum_probs=185.4
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCC----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDG----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g----~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+++.+.+|.|+ | .||.|+++..+ ..|++|++...... .....+.+|+..++.++||||+++++.+.+.
T Consensus 1 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 73 (258)
T smart00219 1 LTLGKKLGEGAFG--EVYKGTLKGLSGEKEVEVAVKTLKEDADE-QQIEEFLREARIMRKLDHPNIVKLLGVCTEE---- 73 (258)
T ss_pred CcccceeccCCCc--ceEEEEecCCCCCCCceEEEEEccCCCCh-HHHHHHHHHHHHHHhcCCCchheEEEEEcCC----
Confidence 46788899988 8 89999998766 89999999654322 2566889999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|++|||+ ++|.+++....... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+||
T Consensus 74 ----~~~~~i~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~ql~~~l~~lh~-~~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 74 ----EPLMIVMEYMEGGDLLDYLRKNRPKE-LSLSDLLSFALQIARGMEYLES-KNFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred ----CeeEEEEeccCCCCHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHHhc-CCeeecccccceEEEccCCeEEEccc
Confidence 3899999999 57998887644211 2344566779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~----- 247 (778)
|++.......... .....++..|++||.+.+ ..++.++|+|+|||++|+|++ |.+|+......
T Consensus 148 g~~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~ 216 (258)
T smart00219 148 GLSRDLYDDDYYK-----KKGGKLPIRWMAPESLKD------GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEY 216 (258)
T ss_pred CCceecccccccc-----cccCCCcccccChHHhcc------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9988775431111 001123458999998855 356789999999999999998 66776532111
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
....+|..+.+++.+||+.+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 217 LKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 11346778899999999999999999999885
No 299
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.6e-30 Score=279.34 Aligned_cols=236 Identities=15% Similarity=0.153 Sum_probs=189.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
-|.-.+.||.|+ | .||-+++..+++.||||++..+... ......+..||+.|++|+|||+|.|-++|-.+.
T Consensus 27 lf~dLrEIGHGSFG--AVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~----- 99 (948)
T KOG0577|consen 27 LFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH----- 99 (948)
T ss_pred HHHHHHHhcCCccc--eeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-----
Confidence 366678899999 8 8999999999999999998864322 234566889999999999999999999998754
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+.++||||| |+-.++|.-.... ..+..|+.++++.+.||.|||+ .+.||||||..||++++.|.+||+|||.+
T Consensus 100 ---TaWLVMEYClGSAsDlleVhkKp--lqEvEIAAi~~gaL~gLaYLHS-~~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 100 ---TAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred ---hHHHHHHHHhccHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHH-hhHHhhhccccceEecCCCeeeeccccch
Confidence 789999999 7777776654322 1233477789999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-CChhhhhcc------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEELRNT------ 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p-~~~~~l~~~------ 249 (778)
+..... ..+++++.|||||++...- ...|+-++||||||+.+.|+...+|| |+.+...-+
T Consensus 174 si~~PA----------nsFvGTPywMAPEVILAMD---EGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN 240 (948)
T KOG0577|consen 174 SIMAPA----------NSFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 240 (948)
T ss_pred hhcCch----------hcccCCccccchhHheecc---ccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc
Confidence 887653 2346677899999987421 13577899999999999999998865 443322211
Q ss_pred --C-----CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --A-----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --~-----~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .....+..++..||..-|..||+.+++|.|+
T Consensus 241 esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 241 ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 1 1233477888999999999999999999997
No 300
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=1.1e-28 Score=262.52 Aligned_cols=239 Identities=17% Similarity=0.160 Sum_probs=183.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
....|++.+.||.|+ | +||+|+++.+|+. |+||++..... ......+.+|+.+++.+.||||+++++.+...
T Consensus 5 ~~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (279)
T cd05109 5 KETELKKVKVLGSGAFG--TVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLTS 81 (279)
T ss_pred chhheeeeeecCCCCCc--eEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC
Confidence 445799999999998 8 9999998877764 89999875432 33456788999999999999999999988642
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..++++||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+|
T Consensus 82 ---------~~~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~iiH~dlkp~Nil~~~~~~~k 149 (279)
T cd05109 82 ---------TVQLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEE-VRLVHRDLAARNVLVKSPNHVK 149 (279)
T ss_pred ---------CcEEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcCCCcEE
Confidence 578999998 689888876431 11233345558899999999995 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-- 246 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l-- 246 (778)
|+|||+++........ ........+..|++||...+ ..++.++|+|||||++|||++ |..|+.....
T Consensus 150 L~dfG~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 219 (279)
T cd05109 150 ITDFGLARLLDIDETE----YHADGGKVPIKWMALESILH------RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE 219 (279)
T ss_pred ECCCCceeecccccce----eecCCCccchhhCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999876532110 00111122347999999865 356789999999999999998 7777753211
Q ss_pred -----hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 -----RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 -----~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ...++..+..++.+||..||..||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 220 IPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred HHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11 12345678889999999999999999998854
No 301
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=7.6e-29 Score=263.57 Aligned_cols=236 Identities=18% Similarity=0.242 Sum_probs=184.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+.||.|+ | +||+|+.+.+++.|+||.+....... ......+|+..++.++ ||||+++++.++.+
T Consensus 1 y~~~~~ig~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~------- 70 (283)
T cd07830 1 YKVIKQLGDGTFG--SVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFREN------- 70 (283)
T ss_pred CeeheeeccCCce--EEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcC-------
Confidence 78899999998 8 89999999999999999987653322 1223457899999999 99999999999873
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+||||+ ++|.+++..... .......+..++.||+.+|.|||+ ++++|+||+|+||+++.++.+||+|||++.
T Consensus 71 -~~~~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 71 -DELYFVFEYMEGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIHK-HGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred -CcEEEEEecCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 3899999999 568888876541 112344566679999999999995 999999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN----- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~----- 248 (778)
....... .........|+|||++.+. ..++.++|+||||+++|||++|.++|.... +..
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~ 215 (283)
T cd07830 148 EIRSRPP-------YTDYVSTRWYRAPEILLRS-----TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVL 215 (283)
T ss_pred eccCCCC-------cCCCCCcccccCceeeecC-----cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhc
Confidence 6654211 0112334579999987643 346779999999999999999998774221 000
Q ss_pred ---------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+..+..++++||..+|.+||++.+++.|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~ 281 (283)
T cd07830 216 GTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHP 281 (283)
T ss_pred CCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCC
Confidence 012245678889999999999999999999997
No 302
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.96 E-value=9.2e-29 Score=261.31 Aligned_cols=239 Identities=17% Similarity=0.186 Sum_probs=184.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.+|.|. | .||.|+++.++. .|+||.+.... .+...+.+.+|+..+++++||||+++++++..+
T Consensus 4 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 77 (267)
T cd05066 4 SCIKIEKVIGAGEFG--EVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--- 77 (267)
T ss_pred HHeEeeeeecccCCC--ceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 4699999999998 8 899999875554 79999987543 233456789999999999999999999998753
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 78 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 78 -----KPVMIVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred -----CccEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeehhhchhcEEECCCCeEEeCC
Confidence 3799999999 479998876532 12233345568999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----h-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l- 246 (778)
||++..+...... .........+..|++||.+.+ ..++.++|+|||||++||+++ |..||.... .
T Consensus 150 fg~~~~~~~~~~~---~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~ 220 (267)
T cd05066 150 FGLSRVLEDDPEA---AYTTRGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK 220 (267)
T ss_pred CCcccccccccce---eeecCCCccceeecCHhHhcc------CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH
Confidence 9999876542211 000111112247999999876 356779999999999999886 887764211 1
Q ss_pred --h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+|++.+|..||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 262 (267)
T cd05066 221 AIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSI 262 (267)
T ss_pred HHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHH
Confidence 1 112456788999999999999999999988753
No 303
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=1.4e-28 Score=263.22 Aligned_cols=233 Identities=20% Similarity=0.225 Sum_probs=185.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|.-.+.||.|. | .||+|.++.+++.|+||.+..... ...+.+.+|+.+++.++||||+++++.+...
T Consensus 20 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~------- 88 (285)
T cd06648 20 YLDNFVKIGEGSTG--IVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVG------- 88 (285)
T ss_pred hhhcceEeccCCCe--EEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcC-------
Confidence 455556788887 7 899999999999999999875322 2345688999999999999999999998763
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+.|+|+||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 89 -~~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~d~g~~ 162 (285)
T cd06648 89 -DELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLAVLKALSFLHA-QGVIHRDIKSDSILLTSDGRVKLSDFGFC 162 (285)
T ss_pred -CeEEEEEeccCCCCHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCChhhEEEcCCCcEEEcccccc
Confidence 3899999999 47988887632 2234456669999999999995 89999999999999999999999999988
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------h--
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R-- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~-- 247 (778)
......... .....+...|++||...+ ..++.++|+|||||++|+|++|..||...+. .
T Consensus 163 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 230 (285)
T cd06648 163 AQVSKEVPR------RKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN 230 (285)
T ss_pred hhhccCCcc------cccccCCccccCHHHhcC------CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc
Confidence 765432110 111234458999999865 3467789999999999999999988743211 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++++||..+|.+||++.++++|+
T Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 270 (285)
T cd06648 231 LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHP 270 (285)
T ss_pred CCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCc
Confidence 1123567789999999999999999999999997
No 304
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.96 E-value=9.4e-29 Score=259.99 Aligned_cols=235 Identities=16% Similarity=0.167 Sum_probs=182.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+++|.|+ | .||.|..+ ++..|++|.+...... .+.+.+|+.++++++||||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~----- 72 (260)
T cd05070 4 PRESLQLIKKLGNGQFG--EVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE----- 72 (260)
T ss_pred chHHhhhhheeccccCc--eEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC-----
Confidence 455799999999998 8 89999876 5677999998754332 3468899999999999999999998753
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 73 ----~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 73 ----EPIYIVTEYMSKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIER-MNYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred ----CCcEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEEeCCceEEeCCc
Confidence 2579999999 4799988764321 12334456669999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----hc
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----RN 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----~~ 248 (778)
|++..+...... ......++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||..... ..
T Consensus 147 g~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~ 215 (260)
T cd05070 147 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 215 (260)
T ss_pred eeeeeccCcccc-----cccCCCCCccccChHHHhc------CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999876442110 0111123347999998765 356779999999999999999 7777743211 11
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
....|..+.+++.+|+..+|.+||++.++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 216 VERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 1235667889999999999999999998864
No 305
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.96 E-value=4e-29 Score=268.60 Aligned_cols=234 Identities=18% Similarity=0.209 Sum_probs=185.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.....||.|+ | .||.+.+..++..|+||.+.... ....+.+.+|+..++.++||||+++++.+...
T Consensus 22 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~------ 91 (292)
T cd06658 22 EYLDSFIKIGEGSTG--IVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVG------ 91 (292)
T ss_pred HHHhhhhcccCCCCe--EEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecC------
Confidence 3466677888887 7 89999999999999999987532 23456688999999999999999999998863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.+.|+||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 92 --~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~~~kL~dfg~ 164 (292)
T cd06658 92 --DELWVVMEFLEGGALTDIVTHTRM----NEEQIATVCLSVLRALSYLHN-QGVIHRDIKSDSILLTSDGRIKLSDFGF 164 (292)
T ss_pred --CeEEEEEeCCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCEEEccCcc
Confidence 4899999999 368887754332 234466779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+......... .....++..|+|||+..+ ..++.++|+|||||++|||++|..||..... ..
T Consensus 165 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 232 (292)
T cd06658 165 CAQVSKEVPK------RKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD 232 (292)
T ss_pred hhhccccccc------CceeecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 8765432110 011234458999999865 3566789999999999999999988753211 10
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+..++.+|+..+|.+||++.++++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~ 273 (292)
T cd06658 233 NLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHP 273 (292)
T ss_pred cCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 113455678889999999999999999999997
No 306
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=1.1e-28 Score=261.35 Aligned_cols=230 Identities=13% Similarity=0.176 Sum_probs=176.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCc--EEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSP--VSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~--VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
.+|.|+ | .||+|+.+.++.. +++|.+.... .....+.+.+|++.++++ +||||+++++.++.. ..
T Consensus 2 ~lg~g~~g--~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--------~~ 70 (270)
T cd05047 2 VIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--------GY 70 (270)
T ss_pred cCCCCCCc--eEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--------CC
Confidence 577777 7 8999999888764 5778776422 223455788999999999 799999999999864 37
Q ss_pred EEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 102 IYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
+|+||||+ ++|.+++...... .......+.+++.||+.||.|||+ .+++||||||+||+++.++
T Consensus 71 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nili~~~~ 149 (270)
T cd05047 71 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY 149 (270)
T ss_pred ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccccceEEEcCCC
Confidence 89999999 5899998764321 112345567789999999999995 9999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE 245 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~ 245 (778)
.+||+|||++....... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||....
T Consensus 150 ~~kl~dfgl~~~~~~~~-------~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 216 (270)
T cd05047 150 VAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 216 (270)
T ss_pred eEEECCCCCccccchhh-------hccCCCCccccCChHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCccccC
Confidence 99999999975332110 0011112346999999865 356789999999999999997 888874321
Q ss_pred h----h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 L----R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l----~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. . ....++..+.+++.+|+..+|..||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 217 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred HHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 1 1 112355678899999999999999999999865
No 307
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.96 E-value=1.3e-28 Score=259.85 Aligned_cols=239 Identities=15% Similarity=0.187 Sum_probs=183.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|+..+.+|.|+ | .||+|+.+.++. .|+||.+.... .....+.+.+|++.++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 78 (268)
T cd05063 5 SHITKQKVIGAGEFG--EVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--- 78 (268)
T ss_pred HHceEeeEecCCCCc--cEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC---
Confidence 4688999999997 7 899999987665 68999886543 233456788999999999999999999999764
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|..++..... ......+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 79 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 -----KPAMIITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSD-MNYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred -----CCcEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEEcCCCcEEECC
Confidence 3789999999 479888876431 12233345568999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----hh
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l~ 247 (778)
||++.......... ........+..|++||++.+ ..++.++|+|||||++||+++ |..||.... ..
T Consensus 151 fg~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~ 221 (268)
T cd05063 151 FGLSRVLEDDPEGT---YTTSGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMK 221 (268)
T ss_pred Cccceecccccccc---eeccCCCcCceecCHHHhhc------CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence 99987665421110 00111112336999999875 356778999999999999997 887774211 11
Q ss_pred c---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 N---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ...+|..+.+++.+|+..+|..||++.++++.
T Consensus 222 ~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 222 AINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1 12456778899999999999999999998864
No 308
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=9.6e-29 Score=261.90 Aligned_cols=241 Identities=17% Similarity=0.192 Sum_probs=185.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|++.+.+|.|+ | +||.|+.+.+ ...|++|.+..... +.....+++|+++|++++||||+++++.+..
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 79 (275)
T cd05046 3 PRSNLQEITTLGRGEFG--EVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCRE 79 (275)
T ss_pred ChHhceeeeeeccccee--EEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECC
Confidence 345799999999997 7 9999997643 46799998875422 2356678999999999999999999998875
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCC------CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
. ...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+||++
T Consensus 80 ~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili 150 (275)
T cd05046 80 A--------EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLV 150 (275)
T ss_pred C--------CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh-cCcccCcCccceEEE
Confidence 3 3789999999 58999987654211 23345566779999999999995 899999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~ 241 (778)
+.++.+||+|||++........ ........+..|++||.+.+. ....++|+|||||++|+|++ |..+|
T Consensus 151 ~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~~l~~~~~~p~ 219 (275)
T cd05046 151 SSQREVKVSLLSLSKDVYNSEY-----YKLRNALIPLRWLAPEAVQED------DFSTKSDVWSFGVLMWEVFTQGELPF 219 (275)
T ss_pred eCCCcEEEcccccccccCcccc-----cccCCceeEEeecChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999875432110 001111234479999987652 45678999999999999998 56666
Q ss_pred Chh---h-h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 242 KTE---E-L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 242 ~~~---~-l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
... . + .....+|..+..++.+||+.+|.+||++.+++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 220 YGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred cccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 321 0 0 0123567789999999999999999999999864
No 309
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=9.8e-29 Score=263.70 Aligned_cols=240 Identities=17% Similarity=0.185 Sum_probs=183.3
Q ss_pred CceeccCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
-|++.+.+|.|+ | .||.++. +.++..|+||.+.... .......+.+|+.+|+.++||||+++++++....
T Consensus 5 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 79 (284)
T cd05079 5 FLKRIRDLGEGHFG--KVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG-- 79 (284)
T ss_pred hhhhceecCCCCce--eEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--
Confidence 478999999998 8 8998873 5678899999987543 2344567899999999999999999999987653
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 80 ----~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~-~gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 80 ----GNGIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred ----CCceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecccchheEEEcCCCCEEECC
Confidence 24789999999 579998865432 12334456679999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh--------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-------- 244 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-------- 244 (778)
||++..+........ .......+..|+|||.+.+ ..++.++|+|||||++|||+++..+....
T Consensus 153 fg~~~~~~~~~~~~~---~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~ 223 (284)
T cd05079 153 FGLTKAIETDKEYYT---VKDDLDSPVFWYAPECLIQ------SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI 223 (284)
T ss_pred CccccccccCcccee---ecCCCCCCccccCHHHhcc------CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhc
Confidence 999887654221100 0011122347999998765 34667899999999999999875432110
Q ss_pred -----------h---------hhccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 245 -----------E---------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 245 -----------~---------l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ......++..+.+++.+||+.+|.+||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 224 GPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0 00113456778899999999999999999999875
No 310
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=8.5e-29 Score=266.99 Aligned_cols=244 Identities=16% Similarity=0.250 Sum_probs=185.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLH 86 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d 86 (778)
+...+|++++.+|.|+ | .||.|+.. .++..|+||.+.... .......+.+|+..++.+ +||||+++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFG--QVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred ccHHHeeecceeeccCCc--eEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 3456799999999998 7 89999753 234579999987542 223456788999999999 8999999999
Q ss_pred eeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCC-------------CcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-------------SQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 87 ~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-------------~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
.+..+ ..+|+||||+ ++|.+++....... ......+.+++.||+.||.|||+ .+++
T Consensus 89 ~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~giv 159 (304)
T cd05101 89 ACTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS-QKCI 159 (304)
T ss_pred EEecC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH-CCee
Confidence 99764 3789999999 58999998653211 11223356678999999999995 8999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.+|.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++
T Consensus 160 H~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l 229 (304)
T cd05101 160 HRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLM 229 (304)
T ss_pred ecccccceEEEcCCCcEEECCCccceecccccccc----cccCCCCCceeeCchhhcc------CCCCchhhHHHHHHHH
Confidence 99999999999999999999999998765422110 0111122347999999866 3567789999999999
Q ss_pred HHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 232 YELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 232 yel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|++++ |..++...... ....+|..+..++.+||..+|..||++.++++.-
T Consensus 230 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l 293 (304)
T cd05101 230 WEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL 293 (304)
T ss_pred HHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 99998 66665432111 1134667889999999999999999999998753
No 311
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96 E-value=1.3e-28 Score=263.49 Aligned_cols=241 Identities=14% Similarity=0.164 Sum_probs=182.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
..+|++.+.+|.|+ | .||+|+.+. .+..|+||.+...... .....+.+|+..++.++||||+++++.+...
T Consensus 5 ~~~~~i~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFG--MVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCc--EEEEEEEeccCCCCcceEEEEEECCCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45799999999998 8 899997653 3458999998654322 2344578899999999999999999998753
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcC-------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||++
T Consensus 82 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili 152 (288)
T cd05061 82 --------QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 152 (288)
T ss_pred --------CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEE
Confidence 3789999999 6899999764321 111223455668999999999995 899999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~ 241 (778)
+.++.+||+|||+++.......... ......+..|++||.+.++ .++.++|+|||||++|||++ |..||
T Consensus 153 ~~~~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~~------~~~~~~DvwslG~~l~el~~~~~~p~ 222 (288)
T cd05061 153 AHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDG------VFTTSSDMWSFGVVLWEITSLAEQPY 222 (288)
T ss_pred cCCCcEEECcCCccccccccccccc----cCCCcccccccCHHHhccC------CCChHhHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999876543211000 0011223479999998763 56778999999999999998 56666
Q ss_pred Chhh---h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 242 KTEE---L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 242 ~~~~---l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.... . .....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 274 (288)
T cd05061 223 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 274 (288)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4311 1 0112456778999999999999999999999863
No 312
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.96 E-value=7e-31 Score=267.00 Aligned_cols=232 Identities=16% Similarity=0.197 Sum_probs=192.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
-|++.+++|+|+ | .||++.+|.+|+.|+||.+... ..++.+-.|+.++.+++.|++++||++|...+
T Consensus 34 VFDi~~KLGEGSYG--SV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s------ 101 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYG--SVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS------ 101 (502)
T ss_pred HHHHHHHhcCCcch--HHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCC------
Confidence 488899999998 8 8999999999999999998753 34667889999999999999999999998643
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.++|||||| ++.++.++.++.. ..+..|..++...++||.||| +.+-+|||||..||+++.+|..||+|||.+
T Consensus 102 --DLWIVMEYCGAGSiSDI~R~R~K~--L~E~EIs~iL~~TLKGL~YLH-~~~KIHRDIKAGNILLNT~G~AKLADFGVA 176 (502)
T KOG0574|consen 102 --DLWIVMEYCGAGSISDIMRARRKP--LSEQEISAVLRDTLKGLQYLH-DLKKIHRDIKAGNILLNTDGIAKLADFGVA 176 (502)
T ss_pred --ceEeehhhcCCCcHHHHHHHhcCC--ccHHHHHHHHHHHHhHHHHHH-HHHHHHhhcccccEEEcccchhhhhhcccc
Confidence 799999999 5799988765532 334557778999999999999 588999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcccc-ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-hhhccCCC--
Q 004025 177 SEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-ELRNTASI-- 252 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-~l~~~~~i-- 252 (778)
..+.+. +... .-++++-||+||++.. -+|...+||||||+...||..|++|+..- ..+.+.-|
T Consensus 177 GQLTDT-------MAKRNTVIGTPFWMAPEVI~E------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT 243 (502)
T KOG0574|consen 177 GQLTDT-------MAKRNTVIGTPFWMAPEVIEE------IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT 243 (502)
T ss_pred chhhhh-------HHhhCccccCcccccHHHHHH------hccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC
Confidence 888652 2222 2245568999999986 46788999999999999999999988542 22222211
Q ss_pred ------------CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 253 ------------PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 253 ------------P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+.+.++.||-.+|++|-++.++++|+
T Consensus 244 ~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 244 KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 23466778999999999999999999997
No 313
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96 E-value=1.1e-28 Score=264.49 Aligned_cols=240 Identities=15% Similarity=0.178 Sum_probs=183.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
.-+|.+.+.+|.|+ | .||.|.... ++..|++|.+.... ......+.+|+..+++++||||+++++.++..
T Consensus 4 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 4 RRDIVLKRELGEGAFG--KVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred hHHeEEeeeecccCCC--eEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 34689999999997 7 899998643 45668888876432 23345688999999999999999999999763
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCc-------------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
...|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|||||
T Consensus 80 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlk 150 (291)
T cd05094 80 --------DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLA 150 (291)
T ss_pred --------CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccC
Confidence 3789999999 579999976432 1112334466679999999999995 899999999
Q ss_pred CCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh
Q 004025 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (778)
Q Consensus 157 p~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t 236 (778)
|+||+++.++.+||+|||++.......... ......+...|+|||.+.+ ..++.++|+|||||++|||++
T Consensus 151 p~Nil~~~~~~~~l~dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t 220 (291)
T cd05094 151 TRNCLVGANLLVKIGDFGMSRDVYSTDYYR----VGGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVILWEIFT 220 (291)
T ss_pred cceEEEccCCcEEECCCCcccccCCCceee----cCCCCCcceeecChHHhcc------CCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999987654321100 0011122347999999876 356778999999999999998
Q ss_pred -CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 237 -GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 237 -g~~p~~~~~l-------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|..||..... .....+|..+.+++.+||..+|..||++.++++.
T Consensus 221 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 221 YGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred CCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 8887643211 0113457789999999999999999999988764
No 314
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=9.5e-29 Score=267.17 Aligned_cols=243 Identities=15% Similarity=0.225 Sum_probs=184.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeee
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-------~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~ 87 (778)
...+|.+++.||.|+ | .||.++++. ++..|++|.+.... .+.....+.+|+..++.+ +||||+++++.
T Consensus 16 ~~~~~~i~~~lg~G~~g--~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 16 PRDRLVLGKPLGEGCFG--QVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred ehHHeEEeeeeccCCCe--eEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 335799999999998 8 899998643 23569999987542 233455688899999999 79999999999
Q ss_pred eEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
+..+ ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 93 ~~~~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H 163 (307)
T cd05098 93 CTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIH 163 (307)
T ss_pred EecC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCccc
Confidence 9764 3799999999 5799999765321 112233456669999999999995 99999
Q ss_pred cccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 153 ~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
|||||+||+++.++.+||+|||++........... ......+..|+|||.+.+ ..++.++|+|||||++|
T Consensus 164 ~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~ 233 (307)
T cd05098 164 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK----TTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLW 233 (307)
T ss_pred ccccHHheEEcCCCcEEECCCcccccccccchhhc----cccCCCccceeChHHhcc------CCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999876643211000 011112347999998876 35677899999999999
Q ss_pred HHHh-CCCCCChhhhhc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 233 ELFS-GMRLSKTEELRN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 233 el~t-g~~p~~~~~l~~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||++ |..|+....... ...++..+..++.+||..+|..||++.++++.-
T Consensus 234 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l 296 (307)
T cd05098 234 EIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296 (307)
T ss_pred HHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 9998 667764322111 123566788899999999999999999998753
No 315
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=2e-28 Score=264.98 Aligned_cols=239 Identities=16% Similarity=0.151 Sum_probs=187.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~-~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...|+..+.+|.|+ | +||.|+++.+++.|+||.+.... ........+.+|+++++.++||||+++++++...
T Consensus 13 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 87 (308)
T cd06634 13 PEKLFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--- 87 (308)
T ss_pred cHHHHHHHHheeeCCCE--EEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC---
Confidence 445688888999987 7 89999999999999999987532 2223455677899999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+|+||+ +.|..++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 88 -----~~~~lv~e~~~~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nil~~~~~~~kl~df 159 (308)
T cd06634 88 -----HTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPGLVKLGDF 159 (308)
T ss_pred -----CeeEEEEEccCCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHhEEECCCCcEEECCc
Confidence 3789999999 567776654332 12344566779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh--
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR-- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~-- 247 (778)
|++....... ...++..|+|||.+.+.- ....+.++|+|||||++|+|++|..|+.... +.
T Consensus 160 g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 226 (308)
T cd06634 160 GSASIMAPAN----------XFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226 (308)
T ss_pred ccceeecCcc----------cccCCccccCHHHHhhcc---cCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH
Confidence 9987654321 112345799999975310 0235678999999999999999998764321 10
Q ss_pred --c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+..++++||..+|.+||++.++++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred hhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0 124566788999999999999999999999998
No 316
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.3e-29 Score=281.18 Aligned_cols=237 Identities=15% Similarity=0.192 Sum_probs=186.8
Q ss_pred CCCc-eeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--CCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 18 DLPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--NAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y-~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~--~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..+| .+.+.||.|. - +||+|.+-.+|-.||--.+... ......++++..|++.||.|+||||+++|+++.+..
T Consensus 38 ~gRy~k~~evLGrGafK--tVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~- 114 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFK--TVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD- 114 (632)
T ss_pred CCceeehhhhcccccce--eeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC-
Confidence 3344 3445788886 4 8999999999988875443321 123356789999999999999999999999999866
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC-CccccccCCCCeEEc-CCCcEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-KLVHGNVCLSSVVVT-QTLDWK 169 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~-~ivH~dLkp~NI~v~-~~g~~K 169 (778)
..++.+|||.+ |.|..|+++.+... ...++.++.||++||.|||+.. .|+|||||.+||||+ ..|.+|
T Consensus 115 -----n~~in~iTEL~TSGtLr~Y~kk~~~vn---~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VK 186 (632)
T KOG0584|consen 115 -----NKTINFITELFTSGTLREYRKKHRRVN---IKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVK 186 (632)
T ss_pred -----CceeeeeeecccCCcHHHHHHHhccCC---HHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCcee
Confidence 45899999999 67999999877543 3346666999999999999733 699999999999999 569999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-hhhhc
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELRN 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-~~l~~ 248 (778)
|||+|+++....... ..-++++.|||||+... .|...+||||||+.|.||.++..||.. ....+
T Consensus 187 IGDLGLAtl~r~s~a--------ksvIGTPEFMAPEmYEE-------~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ 251 (632)
T KOG0584|consen 187 IGDLGLATLLRKSHA--------KSVIGTPEFMAPEMYEE-------NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ 251 (632)
T ss_pred ecchhHHHHhhcccc--------ceeccCccccChHHHhh-------hcchhhhhhhhhHHHHHHHhccCChhhhCCHHH
Confidence 999999998865311 11256779999999874 677899999999999999999988742 11111
Q ss_pred c-----C--------CCC-cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T-----A--------SIP-KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~-----~--------~iP-~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ . ++. +.+++++.+||.. ...|+++.++|+++
T Consensus 252 IYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 252 IYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred HHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhCh
Confidence 1 1 221 3478889999999 99999999999997
No 317
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.96 E-value=2.2e-28 Score=255.31 Aligned_cols=231 Identities=16% Similarity=0.183 Sum_probs=178.2
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
+.+|.|+ | .||.+.++. ++.|+||++...... .....+.+|++++++++||||++++++++.+ ...|
T Consensus 1 ~~lg~g~~g--~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------~~~~ 68 (251)
T cd05041 1 EKIGKGNFG--DVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--------QPIY 68 (251)
T ss_pred CccccCCCc--eEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--------CCeE
Confidence 3577777 7 899999887 999999998765333 3456789999999999999999999998864 3789
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
+|+||+ ++|.+++..... ......+...+.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 69 ~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 145 (251)
T cd05041 69 IVMELVPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLES-KNCIHRDLAARNCLVGENNVLKISDFGMSREEEG 145 (251)
T ss_pred EEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCEehhhcCcceEEEcCCCcEEEeeccccccccC
Confidence 999999 579888876432 12334455568899999999995 8999999999999999999999999999876643
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------hhc-----
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------LRN----- 248 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~-------l~~----- 248 (778)
....... .....+..|+|||.+.++ .++.++|+|||||++|||++ |..+|.... +..
T Consensus 146 ~~~~~~~----~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~ 215 (251)
T cd05041 146 GIYTVSD----GLKQIPIKWTAPEALNYG------RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP 215 (251)
T ss_pred Ccceecc----ccCcceeccCChHhhccC------CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC
Confidence 2110000 001123369999998763 56789999999999999998 666664321 111
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|..+.+++.+|+..+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 12456788999999999999999999999864
No 318
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.96 E-value=2.3e-28 Score=255.13 Aligned_cols=230 Identities=18% Similarity=0.209 Sum_probs=176.8
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
+.||.|+ | .||+|..+ ++..|++|.+..... ......+.+|++.+++++||||+++++.+... ...|
T Consensus 1 ~~ig~g~~g--~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~ 68 (250)
T cd05085 1 ELLGKGNFG--EVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQR--------QPIY 68 (250)
T ss_pred CccCCCCCc--eEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--------CccE
Confidence 3577777 7 89999865 689999999875432 23344688999999999999999999998764 3789
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 69 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 145 (250)
T cd05085 69 IVMELVPGGDFLSFLRKKKD--ELKTKQLVKFALDAAAGMAYLES-KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDD 145 (250)
T ss_pred EEEECCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecccChheEEEcCCCeEEECCCccceeccc
Confidence 999999 578888865432 12344456668999999999995 8999999999999999999999999999875433
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-------------
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------------- 247 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------------- 247 (778)
..... ......+..|+|||++.+. .++.++|+|||||++|++++ |..||......
T Consensus 146 ~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 214 (250)
T cd05085 146 GIYSS-----SGLKQIPIKWTAPEALNYG------RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMS 214 (250)
T ss_pred ccccc-----CCCCCCcccccCHHHhccC------CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 11000 0001123469999998763 46778999999999999998 77777432111
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+|++.+|..||++.++++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 113467788999999999999999999998764
No 319
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.96 E-value=1.5e-28 Score=259.88 Aligned_cols=241 Identities=15% Similarity=0.156 Sum_probs=183.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
..|.+.+.+|.|+ | .||+|..+.++. .|+||.+.... .+.....+.+|+..++.++||||+++++.+..+
T Consensus 4 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 77 (269)
T cd05065 4 SCVKIEEVIGAGEFG--EVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--- 77 (269)
T ss_pred HHeEEEeEecCCCCC--eEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC---
Confidence 3589999999998 8 899999987765 59999987542 334456789999999999999999999998763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|..++..... ......+..++.|++.||.|||+ .+++|+||+|+||+++.++.+||+|
T Consensus 78 -----~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~-~g~~H~dl~p~nili~~~~~~kl~d 149 (269)
T cd05065 78 -----RPVMIITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSE-MNYVHRDLAARNILVNSNLVCKVSD 149 (269)
T ss_pred -----CceEEEEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeecccChheEEEcCCCcEEECC
Confidence 3789999999 469888876432 12233455568999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~---- 247 (778)
||++........... .........+..|++||.+.+ ..++.++|+|||||++||+++ |..||......
T Consensus 150 fg~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~ 222 (269)
T cd05065 150 FGLSRFLEDDTSDPT-YTSSLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIN 222 (269)
T ss_pred CccccccccCccccc-cccccCCCcceeecCHhHhcc------CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 999876644211100 000001111236999999875 356778999999999999886 87776432110
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..+|..||++.+++..
T Consensus 223 ~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 223 AIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred HHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 113456678899999999999999999988754
No 320
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.96 E-value=1.6e-28 Score=263.76 Aligned_cols=242 Identities=12% Similarity=0.145 Sum_probs=182.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC----------------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----------------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~----------------~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP 79 (778)
+..+|++.+.||.|+ | +||.+.++. ++..|+||++.... .......+.+|+++|+.++||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~ 79 (296)
T cd05095 3 PRKRLTFKEKLGEGQFG--EVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDP 79 (296)
T ss_pred ChhhceeeeeccCCCCC--eEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCC
Confidence 344699999999998 8 899885432 34578999987542 233456788999999999999
Q ss_pred CeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCC--------cchHHHHHHHHHHHHHHHHHHcCCC
Q 004025 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS--------QRDEYYAWGLNQIAKAVSFLNNDCK 149 (778)
Q Consensus 80 nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~--------~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (778)
||+++++++..+ ..+|+||||+ ++|.+++........ .....+..++.||+.||.|||+ .+
T Consensus 80 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~ 150 (296)
T cd05095 80 NIIRLLAVCITS--------DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LN 150 (296)
T ss_pred CcceEEEEEecC--------CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH-CC
Confidence 999999999764 3789999999 479998877542211 1123356669999999999995 89
Q ss_pred ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHH
Q 004025 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 150 ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~ 229 (778)
++||||||+||+++.++.+||+|||++..+....... .......+..|++||...++ .++.++|+|||||
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~------~~~~~~DiwSlG~ 220 (296)
T cd05095 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYR----IQGRAVLPIRWMSWESILLG------KFTTASDVWAFGV 220 (296)
T ss_pred eecccCChheEEEcCCCCEEeccCcccccccCCccee----ccCcCcCccccCCHHHHhcC------CccchhhhhHHHH
Confidence 9999999999999999999999999988664321100 00011223579999987653 4677999999999
Q ss_pred HHHHHHh--CCCCCChhh----h----------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFS--GMRLSKTEE----L----------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~t--g~~p~~~~~----l----------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++|||++ |..|+.... . .....+|..+.+++.+||..+|.+||++.++++.
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 293 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHAT 293 (296)
T ss_pred HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 9999998 555653211 0 0113456778899999999999999999998764
No 321
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=1.3e-28 Score=258.84 Aligned_cols=227 Identities=18% Similarity=0.243 Sum_probs=176.2
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHH-HHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+.+|.|. | .||+|+++.+|+.|+||++.+..... ........|.. ..+.++||||+++++.++.+ ..
T Consensus 2 ~~l~~g~~~--~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (260)
T cd05611 2 KPISKGAFG--SVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK--------DY 71 (260)
T ss_pred ccCCcCCCe--eEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC--------Ce
Confidence 4577777 7 89999999999999999997543211 22223344443 44566899999999999863 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+|+|+||+ ++|..+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++...
T Consensus 72 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 72 LYLVMEYLNGGDCASLIKTLGG---LPEDWAKQYIAEVVLGVEDLHQ-RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEEEeccCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999 479998876542 2344566779999999999995 89999999999999999999999999988764
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-----------
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----------- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~----------- 248 (778)
.... ...+...|++||.+.+. .++.++|+||||+++|+|++|..||.......
T Consensus 148 ~~~~----------~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (260)
T cd05611 148 LENK----------KFVGTPDYLAPETILGV------GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN 211 (260)
T ss_pred cccc----------cCCCCcCccChhhhcCC------CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC
Confidence 3311 11234579999998763 46789999999999999999998885322110
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCCh---HHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNS---SKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~---~~lL~~~ 281 (778)
...+|..+.+++++||+.+|..||++ .+++.|+
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~ 252 (260)
T cd05611 212 WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHP 252 (260)
T ss_pred CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcCh
Confidence 12467889999999999999999954 7999997
No 322
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.96 E-value=1.6e-28 Score=262.45 Aligned_cols=242 Identities=17% Similarity=0.166 Sum_probs=184.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|++.+++|.|+ | .||+|.++. ++..|+||++.... .......+.+|+..+++++||||++++++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~ 79 (288)
T cd05050 3 PRNNIEYVRDIGQGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAV 79 (288)
T ss_pred ChHhceecccccccccc--cEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence 446799999999998 8 899998753 67899999987543 23345668899999999999999999999876
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------------CCcchHHHHHHHHHHHHHHHHHHcCCC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (778)
+ ..+|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+
T Consensus 80 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~ 150 (288)
T cd05050 80 G--------KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RK 150 (288)
T ss_pred C--------CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CC
Confidence 4 3789999999 4799998754311 011223355669999999999995 89
Q ss_pred ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHH
Q 004025 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 150 ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~ 229 (778)
++||||+|+||+++.+|.+||+|||++..+........ ......+..|+|||.+.+ ..++.++|+|||||
T Consensus 151 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~ 220 (288)
T cd05050 151 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA----SENDAIPIRWMPPESIFY------NRYTTESDVWAYGV 220 (288)
T ss_pred eecccccHhheEecCCCceEECccccceecccCccccc----cCCCccChhhcCHHHHhc------CCCCchhHHHHHHH
Confidence 99999999999999999999999999876543211000 001122347999998765 35678999999999
Q ss_pred HHHHHHh-CCCCCChh---h-hh---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFS-GMRLSKTE---E-LR---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~t-g~~p~~~~---~-l~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++|||++ |..+|... . +. ....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~ 285 (288)
T cd05050 221 VLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRI 285 (288)
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 9999997 66555321 1 11 012456778999999999999999999998763
No 323
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=1.6e-28 Score=261.94 Aligned_cols=228 Identities=14% Similarity=0.180 Sum_probs=175.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHH---HHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVK---RLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~---~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+|+|+ | .||+++++.+++.|+||.+.+..... .......+|.. .+...+||||+.+++.+..+ ..
T Consensus 2 lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (279)
T cd05633 2 IGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--------DK 71 (279)
T ss_pred cccCCCe--EEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--------Ce
Confidence 56776 7 89999999999999999997653321 11223344443 34445799999999999864 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
.|+||||+ ++|..++...+. .....+..++.||+.||.|||+ .+++|+||||+||+++.++.+||+|||++...
T Consensus 72 ~~lv~e~~~~~~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~-~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 72 LCFILDLMNGGDLHYHLSQHGV---FSEKEMRFYATEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred EEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 99999999 579888876542 2344566779999999999995 89999999999999999999999999998765
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------hhc-----
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LRN----- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------l~~----- 248 (778)
.... .....++..|+|||.+..+ ..++.++|+|||||++|+|++|..||.... +..
T Consensus 148 ~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 214 (279)
T cd05633 148 SKKK--------PHASVGTHGYMAPEVLQKG-----TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTV 214 (279)
T ss_pred cccC--------ccCcCCCcCccCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcC
Confidence 4321 1112345689999997642 346678999999999999999998885321 111
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...++..+.+++++||..||.+|+ ++.++++|+
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 124566788999999999999999 699999998
No 324
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.96 E-value=2.4e-28 Score=259.83 Aligned_cols=239 Identities=17% Similarity=0.199 Sum_probs=184.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...+|++.+.+|.|+ | +||+|+.+.+|+ .|++|.+..... ......+.+|+.++++++||||+++++++..+
T Consensus 5 ~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 81 (279)
T cd05057 5 KETELEKIKVLGSGAFG--TVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLSS 81 (279)
T ss_pred CHHHcEEcceecCCCCc--cEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 345799999999998 8 899999887776 588888765433 33456788999999999999999999998752
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
.+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ ++++|+||+|+||+++.++.+|
T Consensus 82 ---------~~~~v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~i~H~di~p~nil~~~~~~~k 149 (279)
T cd05057 82 ---------QVQLITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLEE-KRLVHRDLAARNVLVKTPQHVK 149 (279)
T ss_pred ---------ceEEEEecCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHh-CCEEecccCcceEEEcCCCeEE
Confidence 689999999 5899988764322 2233455568999999999995 9999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~ 248 (778)
|+|||+++....... .+.......+..|++||.+.. ..++.++|+|||||++||+++ |..||.......
T Consensus 150 L~dfg~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 219 (279)
T cd05057 150 ITDFGLAKLLDVDEK----EYHAEGGKVPIKWMALESILH------RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE 219 (279)
T ss_pred ECCCcccccccCccc----ceecCCCcccccccCHHHhhc------CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence 999999987653211 111111122347999998765 356679999999999999998 888875422111
Q ss_pred -------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+..+..++.+||..+|..||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~ 264 (279)
T cd05057 220 IPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINE 264 (279)
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 11234567788999999999999999988754
No 325
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.4e-28 Score=269.28 Aligned_cols=244 Identities=16% Similarity=0.234 Sum_probs=184.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLH 86 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-------g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d 86 (778)
+...+|++++.||.|+ | .||.|++... +..|+||.+... ..+.....+.+|++.++++ +||||+++++
T Consensus 9 ~~~~~~~i~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFG--QVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred cCHhHeeecceeccccCC--cEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 3445799999999998 7 8999976432 236899988753 2334456788999999999 7999999999
Q ss_pred eeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 87 ~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
.+..+ ..+|+++||+ ++|.+++...... .......+..++.||+.||.|||+ .+++
T Consensus 86 ~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~giv 156 (334)
T cd05100 86 ACTQD--------GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS-QKCI 156 (334)
T ss_pred EEccC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCee
Confidence 98763 3799999999 5799998764311 111223355669999999999995 9999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.++.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++
T Consensus 157 H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il 226 (334)
T cd05100 157 HRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLL 226 (334)
T ss_pred ccccccceEEEcCCCcEEECCcccceecccccccc----cccCCCcCceEcCHHHhcc------CCcCchhhhHHHHHHH
Confidence 99999999999999999999999998765421100 0011112246999999876 3567789999999999
Q ss_pred HHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 232 YELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 232 yel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|||++ |..+|...... ....++..+..++.+|++.+|..||++.+++++.
T Consensus 227 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 227 WEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 99998 66766432111 0123456788899999999999999999998764
No 326
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=1.7e-28 Score=255.49 Aligned_cols=229 Identities=17% Similarity=0.243 Sum_probs=183.2
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
+|.|+ | .||.++++.+++.|+||++.+..... .....+.+|+++++.++||||+++++.++.+ ..+|+
T Consensus 1 lg~G~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~~ 70 (250)
T cd05123 1 LGKGSFG--KVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE--------EKLYL 70 (250)
T ss_pred CCCCCce--EEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC--------CeeEE
Confidence 45565 6 89999999899999999998754322 3466789999999999999999999999863 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lh~-~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 71 VLEYAPGGELFSHLSKEGR---FSEERARFYAAEIVLALEYLHS-LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred EEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 99999 479998877542 2344466679999999999995 99999999999999999999999999998876543
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c--------cC
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N--------TA 250 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~--------~~ 250 (778)
... .........|++||...+. ..+.++|+|+|||++|++++|..||...... . ..
T Consensus 147 ~~~------~~~~~~~~~~~~Pe~~~~~------~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (250)
T cd05123 147 GSR------TNTFCGTPEYLAPEVLLGK------GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE 214 (250)
T ss_pred CCc------ccCCcCCccccChHHhCCC------CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence 110 1111234479999998763 4567899999999999999999887543211 1 12
Q ss_pred CCCcchHHHHHHHhccCCCCCCCh---HHHHhcc
Q 004025 251 SIPKSLLPDYQRLLSSMPSRRLNS---SKLIENS 281 (778)
Q Consensus 251 ~iP~~L~~~i~~lL~~dP~~Rps~---~~lL~~~ 281 (778)
.+|..+.+++++||..+|..||++ .++++|+
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~ 248 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHP 248 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCC
Confidence 346778999999999999999999 8999997
No 327
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=1.5e-28 Score=260.88 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=186.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEEC----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSK----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
-.|++.+.+|.|+ | .||+|+.. .++..|+||++...... ...+.+.+|++.++.++||||++++++++...
T Consensus 4 ~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~- 79 (284)
T cd05038 4 RHLKFIKQLGEGHFG--KVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPG- 79 (284)
T ss_pred hhchhheeeccCCCe--eEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCC-
Confidence 3578889999988 8 89999864 34789999999865433 34667999999999999999999999887643
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+.|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+
T Consensus 80 -----~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~nil~~~~~~~~l~ 151 (284)
T cd05038 80 -----GRSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGS-QRYIHRDLAARNILVESEDLVKIS 151 (284)
T ss_pred -----CCceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCCCEEEc
Confidence 34799999999 479999876542 12234456679999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----- 246 (778)
|||++........... .......+..|++||...+. .++.++|+|||||++|||++|..++.....
T Consensus 152 dfg~~~~~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~------~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~ 222 (284)
T cd05038 152 DFGLAKVLPEDKDYYY---VKEPGESPIFWYAPECLRTS------KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRM 222 (284)
T ss_pred ccccccccccCCccee---ccCCCCCcccccCcHHHccC------CCCcccchHHHhhhhheeeccCCCcccccchhccc
Confidence 9999987753211000 00111233479999988653 566789999999999999999876542110
Q ss_pred -----------------hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 -----------------RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 -----------------~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ...+|..+..++.+||+.+|..||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 223 IGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred cccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 00 12356678899999999999999999999864
No 328
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=259.94 Aligned_cols=242 Identities=19% Similarity=0.240 Sum_probs=186.7
Q ss_pred ceec-cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 21 YNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 21 Y~i~-~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
|.+. +.+|+|. + .|..++...+|..+|||++++. . .....++.+|++++.+.+ |+||++++++||++.
T Consensus 79 YkLt~e~LGeGAya--sVqtcv~i~t~~EYAVKiidKq-~-gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~----- 149 (463)
T KOG0607|consen 79 YKLTSELLGEGAYA--SVQTCVSIQTGKEYAVKIIDKQ-P-GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT----- 149 (463)
T ss_pred HHhHHHHhcCccce--eeeeeeeeccchhhhhhhhhcC-C-chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc-----
Confidence 6664 4678887 7 7999999999999999999975 2 234567889999999997 999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc---EEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~---~KL~d 172 (778)
.+|+|+|.+ +||..+|.+..... ++.-...+..|+.||.|||+ .+|.||||||+||+...-.. +||||
T Consensus 150 ---~FYLVfEKm~GGplLshI~~~~~F~---E~EAs~vvkdia~aLdFlH~-kgIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 150 ---RFYLVFEKMRGGPLLSHIQKRKHFN---EREASRVVKDIASALDFLHT-KGIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred ---eEEEEEecccCchHHHHHHHhhhcc---HHHHHHHHHHHHHHHHHHhh-cCcccccCCccceeecCCCCcCceeeec
Confidence 899999999 68888887765432 22234448999999999995 99999999999999976544 89999
Q ss_pred cccccccCCCCCCCCCCccccc--c-ccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYA--W-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~--~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~---- 245 (778)
|++.+.+...++.. +..... . ++.-.|||||+..- +......|+..+|.||||+++|-|+.|.+||...-
T Consensus 223 fDLgSg~k~~~~~s--pastP~L~tPvGSAEfMAPEVVd~-fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCS--PASTPELLTPVGSAEFMAPEVVDV-FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred cccccccccCCCCC--CCCCccccCcccchhhcchhHHhh-hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 99988776544332 222211 1 22338999999753 22233578899999999999999999999984210
Q ss_pred --------------h----h-ccCCCC--------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 --------------L----R-NTASIP--------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 --------------l----~-~~~~iP--------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ + .-+.+| ....+++..||..++..|.++.++++||
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 0 0 113445 3466778899999999999999999999
No 329
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.96 E-value=1.8e-28 Score=264.70 Aligned_cols=242 Identities=16% Similarity=0.189 Sum_probs=185.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~ 88 (778)
+...+|.+.+.+|.|+ | .||.|+. +.++..|+||.+..... ....+.+.+|+++++++ +||||+++++.+
T Consensus 32 ~~~~~~~~~~~ig~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFG--KVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred ccHHHeEEcceeeccCCe--eEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3445799999999998 8 8999875 34566899999875432 33456789999999999 799999999998
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
... ..+|+|+||+ ++|..++....... .....+..++.||+.||.|||+ .+++|+||||+||+++.++
T Consensus 109 ~~~--------~~~~lv~e~~~~~~L~~~i~~~~~~~-l~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~ 178 (302)
T cd05055 109 TIG--------GPILVITEYCCYGDLLNFLRRKRESF-LTLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNVLLTHGK 178 (302)
T ss_pred ecC--------CceEEEEEcCCCCcHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeehhhhccceEEEcCCC
Confidence 764 3799999999 57999987643211 2334456668999999999995 8999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE 245 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~ 245 (778)
.+||+|||++..+...... ........+..|+|||.+.+. .++.++|+|||||++|||++ |..||....
T Consensus 179 ~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~DiwslGvil~el~t~g~~p~~~~~ 248 (302)
T cd05055 179 IVKICDFGLARDIMNDSNY----VVKGNARLPVKWMAPESIFNC------VYTFESDVWSYGILLWEIFSLGSNPYPGMP 248 (302)
T ss_pred eEEECCCcccccccCCCce----eecCCCCcccccCCHhhhccC------CCCcHhHHHHHHHHHHHHHhCCCCCcCCCC
Confidence 9999999998766432110 001111233479999988763 56778999999999999997 887764321
Q ss_pred h--------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 L--------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l--------~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. . ....++..+.+++.+||+.+|.+||++.++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 249 VDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred chHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 1 0 012356778899999999999999999999864
No 330
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-28 Score=285.33 Aligned_cols=472 Identities=19% Similarity=0.207 Sum_probs=309.7
Q ss_pred CceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCch--hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD--GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~--~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|...+.+|++.- .+|.+|+++ ...|.||+|-+....- ...+....|++ .+.++|||++.|..+.+++
T Consensus 24 e~~~~~~LGstRF-lKv~r~k~~--eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~------ 93 (1431)
T KOG1240|consen 24 ECHYVENLGSTRF-LKVARAKDR--EGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD------ 93 (1431)
T ss_pred ceeeecccCchhh-hhhhhccCC--CceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh------
Confidence 5777788887751 178888875 3349999998764221 22223334445 6667899999999998874
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+..|||-+|+ ..|++.|..+... ..-..+|+++||+.||+-+|. .+|+|||||.+||+|+.-..+.|.||.-.
T Consensus 94 --kAAylvRqyvkhnLyDRlSTRPFL---~~iEKkWiaFQLL~al~qcH~-~gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 94 --KAAYLVRQYVKHNLYDRLSTRPFL---VLIEKKWIAFQLLKALSQCHK-LGVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred --HHHHHHHHHHhhhhhhhhccchHH---HHHHHHHHHHHHHHHHHHHHH-cCccccccccceEEEeeechhhhhccccc
Confidence 4789999999 4699988876643 223468899999999999995 99999999999999999988999999876
Q ss_pred cccCC--CCCCCCCCccccccccCCCCCCcccccccc--ccccC---CCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc
Q 004025 177 SEFDG--NNEAANGPMLQYAWLVGAQYKPVELAKSDW--TAVRK---SPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN 248 (778)
Q Consensus 177 ~~~~~--~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~--~~~~~---~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~ 248 (778)
+..-- +++... .++-.......+|.|||.+...- ....+ ....+.||||+||+|.|+|. |+|+|...++-.
T Consensus 168 KPtYLPeDNPadf-~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a 246 (1431)
T KOG1240|consen 168 KPTYLPEDNPADF-TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA 246 (1431)
T ss_pred CCccCCCCCcccc-eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh
Confidence 54322 221111 11111122234899999986521 11111 14578999999999999998 578887766522
Q ss_pred c------------CCCC-cchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcc---------
Q 004025 249 T------------ASIP-KSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILN--------- 306 (778)
Q Consensus 249 ~------------~~iP-~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~--------- 306 (778)
. ..|+ ..+++++..|++.+|.+|.++++.|++-|+.+|. .||..-+...+..+..+.
T Consensus 247 Yr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP-~yFy~FL~~Y~~~~~~~~~~~p~~~~~ 325 (1431)
T KOG1240|consen 247 YRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFP-EYFYSFLYDYLDRFVPLTTSTPISDNT 325 (1431)
T ss_pred HhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccH-HHHHHHHHHHHHhcCCccccCcccccc
Confidence 1 2343 3688999999999999999999999986665444 344433333333222222
Q ss_pred -----------------------------------------cCChhhHhH-----------------hhhhchhhhcC--
Q 004025 307 -----------------------------------------LKDSVEKDT-----------------FFRKLPNLAEQ-- 326 (778)
Q Consensus 307 -----------------------------------------~k~~~EK~~-----------------F~~~L~~~l~~-- 326 (778)
+.+.+|+.. +.++|....+.
T Consensus 326 ~~gs~i~d~~~~~~~p~n~~~~~~~~~~h~ln~~~~~~~~~~~S~De~~~~~~~al~~~r~~~~~l~~~~dl~~~~q~~~ 405 (1431)
T KOG1240|consen 326 CTGSTIEDNVKLLDGPTNKIYRDFSQICHCLNFPLIKDGGTITSSDEIIDSISKALEFSRHLIENLDVIQDLKPEKQLWT 405 (1431)
T ss_pred ccCcccccccccccCcccchhhhhhccccccccccccccccccCCcHHHHHHHHHHhhhhhhcccchhhhccchHHhccc
Confidence 111122111 11111110000
Q ss_pred --------CChhhhhhchHHHHHHHHhhCCC---CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHh
Q 004025 327 --------LPRQIVLKKLLPLLASALEFGSA---AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQH 395 (778)
Q Consensus 327 --------fp~~~~~~kILP~Ll~~~~~~~~---~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~ 395 (778)
=|..-+.-.+++.++..+..-.. .-.+|.-+..++..++.|.--.+|+|.++-||.+++..||...|+-
T Consensus 406 ~~~~~~~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~T 485 (1431)
T KOG1240|consen 406 ARSSPNIKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALET 485 (1431)
T ss_pred ccCCcccCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHH
Confidence 02222333455666655553322 2234555667788889999999999999999999999999999999
Q ss_pred HHHHHh------hcChhhhhhcchHHHHhhcCC-CcHHHHHHHHHHHHhhhcc----------------C----------
Q 004025 396 IDQYGQ------SFSAQVVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAPK----------------L---------- 442 (778)
Q Consensus 396 l~~~~~------~l~~~~v~~~I~P~l~~gf~D-t~~~iRe~tlksi~~l~pk----------------L---------- 442 (778)
|..++. ..+..++.+.|||++.....| ++..+|-+-...|..+|.. +
T Consensus 486 lt~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nset~~~ 565 (1431)
T KOG1240|consen 486 LTELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSETAPE 565 (1431)
T ss_pred HHHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccccccc
Confidence 888764 456678999999999999999 5555555444444333321 1
Q ss_pred -Chhh----HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhhe
Q 004025 443 -SQRT----ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAA 510 (778)
Q Consensus 443 -~~~~----l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~ 510 (778)
+... |...+-.+...|..|+++-||--..--|+-++-++++..-.-+|++-.. .-|.|..|.=|.|-
T Consensus 566 ~~~~~~~~~L~~~V~~~v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLi-TfLNDkDw~LR~aF 637 (1431)
T KOG1240|consen 566 QNYNTELQALHHTVEQMVSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLI-TFLNDKDWRLRGAF 637 (1431)
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHH-HHhcCccHHHHHHH
Confidence 1111 1222223455566777777777777777777777777666667776666 67777777777653
No 331
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96 E-value=3.2e-28 Score=259.44 Aligned_cols=238 Identities=13% Similarity=0.141 Sum_probs=179.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...|++.+.||.|+ | +||+|+...+++. |++|.+.... .......+.+|+..++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-- 80 (279)
T cd05111 6 ETELRKLKLLGSGVFG--TVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-- 80 (279)
T ss_pred HhhceeccccCccCCc--ceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC--
Confidence 35799999999998 8 8999999888774 6777765332 22334567788889999999999999998753
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...|+++||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 81 -------~~~~~i~e~~~~gsL~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~kl 150 (279)
T cd05111 81 -------ASLQLVTQLSPLGSLLDHVRQHRDS--LDPQRLLNWCVQIAKGMYYLEE-HRMVHRNLAARNILLKSDSIVQI 150 (279)
T ss_pred -------CccEEEEEeCCCCcHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCCcEEE
Confidence 2578899998 5899998764321 2233445568999999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~-- 247 (778)
+|||+++....... .........+..|++||.+.++ .++.++|+|||||++||+++ |..|+......
T Consensus 151 ~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~ 220 (279)
T cd05111 151 ADFGVADLLYPDDK----KYFYSEHKTPIKWMALESILFG------RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV 220 (279)
T ss_pred cCCccceeccCCCc----ccccCCCCCcccccCHHHhccC------CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 99999976643211 1111111233479999998763 56789999999999999998 88777532111
Q ss_pred -----c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+..+..++.+|+..+|.+||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 221 PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred HHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 01234467778999999999999999998764
No 332
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.8e-30 Score=278.87 Aligned_cols=239 Identities=16% Similarity=0.230 Sum_probs=191.1
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
++|...+|.|. | +||++..|.++-..|-|+++.+. +..++.+.-||.+|..+.||+|+++++.|..++
T Consensus 34 WeIiGELGDGAFG--KVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~CdHP~ivkLl~ayy~en------- 102 (1187)
T KOG0579|consen 34 WEIIGELGDGAFG--KVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN------- 102 (1187)
T ss_pred HHHHhhhcCccch--hhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-------
Confidence 56677788888 8 99999999999999999998653 345777889999999999999999999998754
Q ss_pred cEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++|+.|||+ -....+-..+. ...+..|+.+++|++.||.|||+ .+|||||||..||+++-+|+++|+|||.+.
T Consensus 103 -kLwiliEFC~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs-~~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 103 -KLWILIEFCGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHS-QNIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred -ceEEEEeecCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhh-cchhhhhccccceEEEecCcEeeecccccc
Confidence 8999999993 36666655442 23455688889999999999995 999999999999999999999999999875
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-hhhh---------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELR--------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-~~l~--------- 247 (778)
..... .-....+++++.|||||+..... .-...|++++||||||+.+.||.-+.||-.. +..+
T Consensus 179 Kn~~t------~qkRDsFIGTPYWMAPEVvmCET-~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe 251 (1187)
T KOG0579|consen 179 KNKST------RQKRDSFIGTPYWMAPEVVMCET-FKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 251 (1187)
T ss_pred cchhH------HhhhccccCCcccccchheeecc-ccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC
Confidence 54321 11233467778899999976421 1225789999999999999999999887532 1111
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+......++.+++++||..||..||+++++++|+
T Consensus 252 PPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 252 PPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHP 290 (1187)
T ss_pred CCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence 1123345678899999999999999999999998
No 333
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.5e-30 Score=259.47 Aligned_cols=250 Identities=19% Similarity=0.336 Sum_probs=195.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|+-..++|+|. | .||+|+.+.+|+.|++|+.-..+..+..-..+.+|+++|..|+|+|++.+++.+.+.....-+.
T Consensus 18 ~yek~~kigqGtfg--eVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFG--EVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred HHHHHHhcCCchHH--HHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 477777899998 8 8999999999999999987766666666677889999999999999999998886433221112
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
+.++|+|+.+| .+|.-+|.+.... .....|+..+.++..||.|+|. ..|+|||+|+.||+|+.+|.+||+|||+++
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr--~sls~Ikk~Mk~Lm~GL~~iHr-~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVR--FSLSEIKKVMKGLMNGLYYIHR-NKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCcccc--ccHHHHHHHHHHHHHHHHHHHH-hhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 45799999999 5788888765321 1233477779999999999995 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN----- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~----- 248 (778)
.+........ +- ....+++..|++||.+.+. ..++.++|+|+-||+|.||+++.+++..+. +.-
T Consensus 173 ~fs~~~n~~k-pr-ytnrvvTLwYrppEllLG~-----r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~Lc 245 (376)
T KOG0669|consen 173 AFSTSKNVVK-PR-YTNRVVTLWYRPPELLLGD-----REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLC 245 (376)
T ss_pred ceecccccCC-CC-cccceeeeecCCHHHhhcc-----cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence 7765432221 11 2244667799999999986 678899999999999999999998875321 100
Q ss_pred -------------------c--CCCCc-----------------chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------------T--ASIPK-----------------SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------------~--~~iP~-----------------~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ..+|+ ...+++.+||..||.+|+.+++.++|.
T Consensus 246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 0 11121 345678899999999999999999997
No 334
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=3.2e-28 Score=256.21 Aligned_cols=232 Identities=16% Similarity=0.162 Sum_probs=175.9
Q ss_pred CCCCCC-CceEEEEeEEC--CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSK--DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k--~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | .||.|+.+ .++..|+||++.... .....+.+.+|+.++++++||||+++++.++. ...
T Consensus 2 ~ig~G~~g--~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---------~~~ 69 (257)
T cd05115 2 ELGSGNFG--CVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---------EAL 69 (257)
T ss_pred ccCCCCcc--cEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---------CCe
Confidence 367777 7 89999765 445679999987543 23345678899999999999999999998863 268
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 70 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 70 MLVMEMASGGPLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEG-KNFVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred EEEEEeCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-cCeeecccchheEEEcCCCcEEeccCCcccccc
Confidence 9999999 579988875332 12334466679999999999995 899999999999999999999999999987654
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-------hc----
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------RN---- 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l-------~~---- 248 (778)
....... .......+..|+|||.+.. ..++.++|+|||||++||+++ |..||..... ..
T Consensus 147 ~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd05115 147 ADDSYYK---ARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL 217 (257)
T ss_pred CCcccee---ccCCCCCCcccCCHHHHcc------CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC
Confidence 3211100 0011112347999998765 346678999999999999996 8888753211 01
Q ss_pred --cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+..+.+++.+|+..+|..||++.++.+.-
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l 252 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERM 252 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 123467788999999999999999999998764
No 335
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=2.3e-28 Score=261.41 Aligned_cols=239 Identities=15% Similarity=0.249 Sum_probs=185.5
Q ss_pred CceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~--~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+|++.+.+|.|+ | .||.+++. .+|..|++|++...... ....+.+.+|+++|++++ ||||++++++++.+
T Consensus 1 ~y~~~~~lg~G~~g--~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~- 77 (290)
T cd05613 1 NFELLKVLGTGAYG--KVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD- 77 (290)
T ss_pred CceeeeeeccCCcc--eEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC-
Confidence 489999999998 8 88988874 47899999999753221 134566889999999995 99999999999864
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||
T Consensus 78 -------~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 78 -------TKLHLILDYINGGELFTHLSQRER---FKEQEVQIYSGEIVLALEHLHK-LGIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred -------CeEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEECCCCCEEE
Confidence 3899999999 579988876542 2244566678899999999995 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++......... ......+...|++||.+.+.. ..++.++|+|||||++|+|++|..|+....
T Consensus 147 ~dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~ 217 (290)
T cd05613 147 TDFGLSKEFHEDEVE-----RAYSFCGTIEYMAPDIVRGGD----GGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ 217 (290)
T ss_pred eeCccceeccccccc-----ccccccCCcccCChhhccCCC----CCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH
Confidence 999998776432111 111223455899999986521 235678999999999999999998874211
Q ss_pred --h-hc----c----CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 246 --L-RN----T----ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 246 --l-~~----~----~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
+ .. . ..++..+..++++||..+|..|+ ++.+++.|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~ 269 (290)
T cd05613 218 AEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHP 269 (290)
T ss_pred HHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCc
Confidence 0 00 1 12455678899999999999997 789999997
No 336
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=3.2e-28 Score=255.78 Aligned_cols=235 Identities=15% Similarity=0.154 Sum_probs=174.0
Q ss_pred cCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.||.|+ | +||+|.... ++..|+||.+.... .....+.+.+|+.+++.++||||+++++.+...+ .
T Consensus 1 ~~lg~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~ 70 (262)
T cd05058 1 RVIGKGHFG--CVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE-------G 70 (262)
T ss_pred CcccccCCc--eEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC-------C
Confidence 3577887 7 899998653 34579999886432 2234567889999999999999999999765432 3
Q ss_pred EEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..|+|+||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 71 ~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlk~~nili~~~~~~kl~dfg~~~~ 147 (262)
T cd05058 71 SPLVVLPYMKHGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLAS-KKFVHRDLAARNCMLDESFTVKVADFGLARD 147 (262)
T ss_pred CcEEEEecCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCCcEEECCcccccc
Confidence 678999999 5899998764322 1223344557899999999995 8999999999999999999999999999886
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCChhhh-----------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEEL----------- 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~~~l----------- 246 (778)
+....... .........+..|+|||...+ ..++.++|+|||||++|||++|+ +++.....
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 219 (262)
T cd05058 148 IYDKEYYS--VHNHTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR 219 (262)
T ss_pred ccCCccee--ecccccCcCCccccChhHhcc------CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 64321100 000111122347999998765 35667999999999999999954 55542211
Q ss_pred --hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+||..+|..||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 220 RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0112367788999999999999999999999875
No 337
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.96 E-value=3.9e-28 Score=254.23 Aligned_cols=233 Identities=15% Similarity=0.157 Sum_probs=181.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||+|.++ ++..++||.+...... ...+.+|++.+++++||||+++++.++..
T Consensus 5 ~~~~~~~ig~g~~g--~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05112 5 ELTLVQEIGSGQFG--LVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTER------- 71 (256)
T ss_pred HeEEEeeecCcccc--eEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccC-------
Confidence 689999999998 8 89999876 4778999998754332 23578899999999999999999998764
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+ +.|.+++..... ....+.+...+.|++.||.|||+ .+++|+||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 147 (256)
T cd05112 72 -SPICLVFEFMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLES-SNVIHRDLAARNCLVGENQVVKVSDFGMT 147 (256)
T ss_pred -CceEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCccccccccceEEEcCCCeEEECCCcce
Confidence 3789999999 468888875432 12344456668899999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----c---
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----N--- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~----~--- 248 (778)
.......... ......+..|++||++.+ ..++.++|+|||||++|||++ |..||...... .
T Consensus 148 ~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 216 (256)
T cd05112 148 RFVLDDQYTS-----STGTKFPVKWSSPEVFSF------SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA 216 (256)
T ss_pred eecccCcccc-----cCCCccchhhcCHhHhcc------CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC
Confidence 7654321100 011122347999999875 356678999999999999998 78877533211 1
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+..+.+++.+||+.+|.+||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 217 GFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 11246678899999999999999999999874
No 338
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=4.6e-28 Score=256.17 Aligned_cols=245 Identities=11% Similarity=0.117 Sum_probs=183.2
Q ss_pred ceeccCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
|.+.+.||.|+ | +||+|..+. ++..|+||++..+.......+.+.+|++.+++++||||+++++.+......+
T Consensus 1 ~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~- 77 (273)
T cd05074 1 FTLGRMLGKGEFG--SVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG- 77 (273)
T ss_pred CcchhcccCCCCC--CEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC-
Confidence 77889999998 8 899998654 4688999999866545555677889999999999999999999886532110
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcC---CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.....++++||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 78 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 78 -RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS-KNFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred -cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccchhhEEEcCCCCEEEC
Confidence 012457889998 5788776543211 112334456669999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR--- 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~--- 247 (778)
|||+++......... .......+..|++||.+.+ ..++.++|+|||||++|+|++ |.+++......
T Consensus 156 dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~------~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05074 156 DFGLSKKIYSGDYYR----QGCASKLPVKWLALESLAD------NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIY 225 (273)
T ss_pred cccccccccCCccee----cCCCccCchhhcCHhHHhc------CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHH
Confidence 999988664321100 0111123347999998765 356678999999999999998 77776432111
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....++..+.+++.+||+.+|..||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 226 NYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 112456778999999999999999999999865
No 339
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.96 E-value=4.9e-28 Score=254.75 Aligned_cols=235 Identities=16% Similarity=0.174 Sum_probs=182.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|.+.+++|.|+ | .||.|... .+..|+||.+... ....+.+.+|+++++.++||||+++++.+.. .
T Consensus 4 ~~~~~~~~~~lg~g~~~--~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--- 73 (260)
T cd05073 4 PRESLKLEKKLGAGQFG--EVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--- 73 (260)
T ss_pred cccceeEEeEecCccce--EEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C---
Confidence 456799999999998 7 89999865 5677999987643 2234568889999999999999999999875 2
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 74 -----~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~ni~i~~~~~~~l~d~ 146 (260)
T cd05073 74 -----PIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSASLVCKIADF 146 (260)
T ss_pred -----CeEEEEEeCCCCcHHHHHHhCCcc-ccCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCCcEEECCC
Confidence 689999999 4799998764321 12223345558999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh---h--
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---R-- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l---~-- 247 (778)
|++..+...... .......+..|+|||++.+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 147 ~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05073 147 GLARVIEDNEYT-----AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 215 (260)
T ss_pred cceeeccCCCcc-----cccCCcccccccCHhHhcc------CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 998776432110 0111122347999999876 356778999999999999998 7777753211 0
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
....+|..+.+++.+|+..+|.+||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 216 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 12346678999999999999999999988765
No 340
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.96 E-value=3e-28 Score=255.32 Aligned_cols=228 Identities=19% Similarity=0.214 Sum_probs=179.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.+|.|+ | .||.|.. +++.|+||.+.... ..+.+.+|+..++.++||||+++++.+..+
T Consensus 6 ~~~~~~~~lg~g~~g--~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 71 (254)
T cd05083 6 QKLTLGEIIGEGEFG--AVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN------ 71 (254)
T ss_pred HHceeeeeeccCCCC--ceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------
Confidence 4599999999998 8 8999864 68899999986432 234678999999999999999999988642
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 72 ---~~~~v~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~~~H~dl~p~nili~~~~~~kl~Dfg~ 146 (254)
T cd05083 72 ---GLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEYLES-KKLVHRDLAARNILVSEDGVAKVSDFGL 146 (254)
T ss_pred ---CcEEEEECCCCCCHHHHHHhcCcCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCCcEEECCCcc
Confidence 479999999 58999987654222 2233345568999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------- 247 (778)
+........ ....+..|+|||.+.++ .++.+.|+|||||++|+|++ |.+||......
T Consensus 147 ~~~~~~~~~---------~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 211 (254)
T cd05083 147 ARVGSMGVD---------NSKLPVKWTAPEALKHK------KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE 211 (254)
T ss_pred ceeccccCC---------CCCCCceecCHHHhccC------CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh
Confidence 876432110 11223479999988753 56678999999999999997 88777532211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||+.+|..||++.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 212 KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred CCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 113466778999999999999999999998764
No 341
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.96 E-value=7e-28 Score=254.45 Aligned_cols=238 Identities=16% Similarity=0.247 Sum_probs=184.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCC--------CchhHHHHHHHHHHHHhc-CCCCCeeeEeeee
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTN--------AQDGHLAAARNGVKRLRT-VRHPNILAFLHST 88 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~-~g~~VaIK~~~~~~--------~~~~~~~~~~~ev~~Lk~-LrHPnIlk~~d~~ 88 (778)
.|++.+.||.|. | .||.|..+. .++.++||.+.... ..+.....+.+|+..+++ ++||||+++++.+
T Consensus 1 ~y~~~~~ig~G~~~--~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 78 (269)
T cd08528 1 EYAVLEHLGSGAFG--CVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF 78 (269)
T ss_pred CchhhhhhcCCCCc--eEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence 489999999998 8 899999987 67899999886432 122344556778887765 7999999999999
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
+.+ ..+|+||||+ ++|.+++..... ........+...+.|++.+|.|||+..+++|+||+|+||+++.+
T Consensus 79 ~~~--------~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 79 LEN--------DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED 150 (269)
T ss_pred ccC--------CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC
Confidence 864 3899999999 478888765321 11223344556689999999999954689999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~ 245 (778)
+.+||+|||++....... ......++..|++||.+.+. .++.++|+||||+++|+|++|.+||....
T Consensus 151 ~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~ll~~l~~g~~p~~~~~ 217 (269)
T cd08528 151 DKVTITDFGLAKQKQPES-------KLTSVVGTILYSCPEIVKNE------PYGEKADVWAFGCILYQMCTLQPPFYSTN 217 (269)
T ss_pred CcEEEecccceeeccccc-------ccccccCcccCcChhhhcCC------CCchHHHHHHHHHHHHHHHhCCCcccccC
Confidence 999999999998765421 11122345589999998763 46778999999999999999998876432
Q ss_pred hhc--------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 LRN--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l~~--------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
... ...++..+.+++++||..||..||++.++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 218 MLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 210 11456778999999999999999999998764
No 342
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.96 E-value=3.5e-28 Score=267.46 Aligned_cols=243 Identities=16% Similarity=0.196 Sum_probs=181.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~ 90 (778)
..+|.+++.||.|+ | +||+|++ ..+++.|+||++...... .....+.+|+.+|+.+ +||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTK 82 (343)
T ss_pred hhHhcccccccCCccc--eEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence 44699999999998 8 9999984 356789999999754322 3455688999999999 68999999998865
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC----------------------------------------------
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------------------------------- 122 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------------------------------------- 122 (778)
. ...+|+||||| ++|.+++......
T Consensus 83 ~-------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 83 P-------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred C-------CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 3 24789999999 5799888653210
Q ss_pred ------------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCC
Q 004025 123 ------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNE 184 (778)
Q Consensus 123 ------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~ 184 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 234 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD 234 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCccCeEEEcCCCcEEEEecccccccccCcc
Confidence 001112234458899999999995 9999999999999999999999999999877543211
Q ss_pred CCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----h----hc------c
Q 004025 185 AANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L----RN------T 249 (778)
Q Consensus 185 ~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l----~~------~ 249 (778)
.. .......+..|+|||.+.+ ..++.++|+|||||++|+|++ |..|+.... . .. .
T Consensus 235 ~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 304 (343)
T cd05103 235 YV----RKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 304 (343)
T ss_pred hh----hcCCCCCCcceECcHHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC
Confidence 00 0001122346999999865 356789999999999999997 777764321 1 00 1
Q ss_pred CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+|+..+|.+||++.+++++-
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l 336 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 336 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 12445678889999999999999999999874
No 343
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=4.8e-28 Score=256.64 Aligned_cols=225 Identities=17% Similarity=0.170 Sum_probs=175.7
Q ss_pred CceeccCC--CCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPY--PSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~l--g~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
.|++.+.+ |.|. | .||.++++.++..+++|.+..+.... . |+.....+ +||||+++++.+..+
T Consensus 15 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~--~-----e~~~~~~~~~h~~iv~~~~~~~~~---- 81 (267)
T PHA03390 15 NCEIVKKLKLIDGKFG--KVSVLKHKPTQKLFVQKIIKAKNFNA--I-----EPMVHQLMKDNPNFIKLYYSVTTL---- 81 (267)
T ss_pred hhccccceeecCCCce--EEEEEEEcCCCcEEEEEEEehhhcch--h-----hHHHHHHhhcCCCEEEEEEEEecC----
Confidence 57777776 8887 8 99999999999999999997643221 1 12222222 699999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||++||.|||+ .+++||||+|+||+++.++ .++|+|
T Consensus 82 ----~~~~iv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 82 ----KGHVLIMDYIKDGDLFDLLKKEGK---LSEAEVKKIIRQLVEALNDLHK-HNIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred ----CeeEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEeCCCCeEEEec
Confidence 3899999999 579999877542 2334456669999999999995 8999999999999999988 999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------- 245 (778)
||++....... ...+...|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 154 fg~~~~~~~~~----------~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~ 217 (267)
T PHA03390 154 YGLCKIIGTPS----------CYDGTLDYFSPEKIKG------HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE 217 (267)
T ss_pred CccceecCCCc----------cCCCCCcccChhhhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence 99987664321 1123458999999876 356678999999999999999998875321
Q ss_pred -hh--------ccCCCCcchHHHHHHHhccCCCCCCC-hHHHHhcc
Q 004025 246 -LR--------NTASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENS 281 (778)
Q Consensus 246 -l~--------~~~~iP~~L~~~i~~lL~~dP~~Rps-~~~lL~~~ 281 (778)
+. ....++..+.+++.+||+.+|.+|++ ++++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~ 263 (267)
T PHA03390 218 SLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHP 263 (267)
T ss_pred HHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCC
Confidence 10 11236677889999999999999996 69999997
No 344
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=8.3e-28 Score=256.22 Aligned_cols=228 Identities=14% Similarity=0.183 Sum_probs=175.5
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHH---HHHHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNG---VKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~e---v~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
||.|+ | .||+|.+..+++.|+||.+.++.... .......+| ++.++...||+|+++++.++.+ ..
T Consensus 2 ig~g~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (278)
T cd05606 2 IGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--------DK 71 (278)
T ss_pred cccCCCe--EEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--------CE
Confidence 56776 7 89999999999999999998653322 111223333 3455566899999999999864 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+|+||||+ ++|..++...+. .....+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++..+
T Consensus 72 ~~~v~e~~~g~~L~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 72 LSFILDLMNGGDLHYHLSQHGV---FSEAEMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred EEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 99999999 468888865432 2344566779999999999995 89999999999999999999999999998765
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------hhc-----
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LRN----- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------l~~----- 248 (778)
.... .....+...|+|||++.++ ..++.++|+|||||++|+|++|..||.... ...
T Consensus 148 ~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 214 (278)
T cd05606 148 SKKK--------PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 214 (278)
T ss_pred CccC--------CcCcCCCcCCcCcHHhcCC-----CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc
Confidence 4321 1112345689999998653 246678999999999999999998885331 100
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...++..+.+++.+||..+|..|+ ++.++++|+
T Consensus 215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence 123456788999999999999999 999999998
No 345
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=3.8e-28 Score=261.11 Aligned_cols=232 Identities=19% Similarity=0.208 Sum_probs=184.2
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|+...++|.|+ | .||.++.+.+|+.|+||++.... ......+.+|+..++.++||||+++++.+...
T Consensus 22 ~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 89 (292)
T cd06657 22 LDNFIKIGEGSTG--IVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-------- 89 (292)
T ss_pred hhhHHHcCCCCCe--EEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeC--------
Confidence 44445788887 8 89999999999999999986432 23456688999999999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.+.|+||||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||++.
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lH~-~givH~dl~p~Nilv~~~~~~~l~dfg~~~ 164 (292)
T cd06657 90 DELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLKALSVLHA-QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164 (292)
T ss_pred CEEEEEEecCCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEcccccce
Confidence 4899999999 46887775433 2334466779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----------- 246 (778)
........ .....+...|++||.+.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 165 ~~~~~~~~------~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 232 (292)
T cd06657 165 QVSKEVPR------RKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 232 (292)
T ss_pred eccccccc------ccccccCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC
Confidence 65432110 011123457999998765 2456789999999999999999988753210
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~ 271 (292)
T cd06657 233 PPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 271 (292)
T ss_pred CcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcCh
Confidence 11234677889999999999999999999999997
No 346
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.96 E-value=3.2e-28 Score=256.79 Aligned_cols=233 Identities=16% Similarity=0.199 Sum_probs=176.3
Q ss_pred CCCCCC-CceEEEEeEECCCC------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 26 PYPSAW-GSWSHFQGTSKDDG------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.+|.|+ | .||.|+.+..+ ..|+||.+..... ......+.+|+.+++.++||||+++++++...
T Consensus 2 ~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (269)
T cd05044 2 FLGSGAFG--EVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN------- 71 (269)
T ss_pred ccccccce--eEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-------
Confidence 467776 7 89999986544 6899999865422 23355688899999999999999999998763
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcC----CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-----c
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-----D 167 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-----~ 167 (778)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++ .
T Consensus 72 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 72 -EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ-MHFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred -CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh-CCcccCCCChheEEEecCCCCCCcc
Confidence 3789999999 5799998764321 112223355568999999999995 8999999999999999888 8
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE- 245 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~- 245 (778)
+||+|||++........... ......+..|+|||.+.++ .++.++|+|||||++|||++ |..||....
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~ellt~g~~p~~~~~~ 219 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRK----EGEGLLPVRWMAPESLLDG------KFTTQSDVWSFGVLMWEILTLGQQPYPALNN 219 (269)
T ss_pred eEECCccccccccccccccc----CcccCCCccccCHHHHccC------CcccchhHHHHHHHHHHHHHcCCCCCcccCH
Confidence 99999999876643211000 0111234579999998763 46779999999999999998 887764321
Q ss_pred --h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 --L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 --l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. .....+|..+.+++.+||..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 266 (269)
T cd05044 220 QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEI 266 (269)
T ss_pred HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0 1123567788999999999999999999998764
No 347
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=1.7e-28 Score=258.07 Aligned_cols=226 Identities=18% Similarity=0.220 Sum_probs=171.4
Q ss_pred cCCCCCC-CceEEEEeEECCCCCc-------EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSP-------VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~-------VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
+.||.|+ | .||+|.++.++.. |++|.+.... ....+.+.+|+.+++.+.||||+++++.+..+
T Consensus 1 ~~lg~G~~~--~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~----- 71 (258)
T cd05078 1 ESLGQGTFT--KIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCG----- 71 (258)
T ss_pred CCCCcccch--hheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----
Confidence 4678887 7 8999998765544 8888876432 23455678899999999999999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc-------
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD------- 167 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~------- 167 (778)
...|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 72 ---~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~~~~~~~ 145 (258)
T cd05078 72 ---DESIMVQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLED-KGLTHGNVCAKNVLLIREEDRKTGNPP 145 (258)
T ss_pred ---CCcEEEEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEecccccccCCCc
Confidence 3789999999 479999876542 12334455569999999999995 99999999999999988776
Q ss_pred -EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCChhh
Q 004025 168 -WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEE 245 (778)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~~~ 245 (778)
+||+|||++....... .......|+|||++.+. ..++.++|+|||||++|||++|. +++....
T Consensus 146 ~~~l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~ 210 (258)
T cd05078 146 FIKLSDPGISITVLPKE----------ILLERIPWVPPECIENP-----QNLSLAADKWSFGTTLWEIFSGGDKPLSALD 210 (258)
T ss_pred eEEecccccccccCCch----------hccccCCccCchhccCC-----CCCCchhhHHHHHHHHHHHHcCCCCChhhcc
Confidence 5899999876543211 11233479999998753 34567899999999999999985 4443211
Q ss_pred h-------hccCCCC----cchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 L-------RNTASIP----KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l-------~~~~~iP----~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. .....+| ..+.+++.+||+.+|.+||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 211 SQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 1 1122333 457889999999999999999999864
No 348
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=5.8e-28 Score=255.18 Aligned_cols=226 Identities=17% Similarity=0.185 Sum_probs=169.3
Q ss_pred cCCCCCC-CceEEEEeEECCC------------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 25 DPYPSAW-GSWSHFQGTSKDD------------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~------------g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
+.+|.|. | +||+|+.... ...|+||++.... ......+.+|+.+++.++||||+++++++..+
T Consensus 1 ~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRT--QIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcc--eEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 3578887 7 9999986432 2358888876532 23345678889999999999999999998764
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~-- 167 (778)
...|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 77 --------~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~~ 145 (262)
T cd05077 77 --------VENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLED-KDLVHGNVCTKNILLAREGIDG 145 (262)
T ss_pred --------CCCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhh-CCeECCCCCcccEEEecCCccC
Confidence 3679999999 468777765332 12333455669999999999995 89999999999999987764
Q ss_pred -----EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHH-hCCCCC
Q 004025 168 -----WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF-SGMRLS 241 (778)
Q Consensus 168 -----~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~-tg~~p~ 241 (778)
+||+|||++....... ...++..|+|||.+..+ ..++.++|+|||||++|||+ +|..|+
T Consensus 146 ~~~~~~~l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~el~~~~~~p~ 210 (262)
T cd05077 146 ECGPFIKLSDPGIPITVLSRQ----------ECVERIPWIAPECVEDS-----KNLSIAADKWSFGTTLWEICYNGEIPL 210 (262)
T ss_pred CCCceeEeCCCCCCccccCcc----------cccccccccChhhhcCC-----CCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 8999999886553311 11234579999987643 35678899999999999997 566666
Q ss_pred Chhhhh-----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 242 KTEELR-----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 242 ~~~~l~-----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...... .....+..+.+++.+||+.+|.+||++.+++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 211 KDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 432211 112234668889999999999999999999875
No 349
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.96 E-value=7.7e-28 Score=254.36 Aligned_cols=239 Identities=16% Similarity=0.206 Sum_probs=170.1
Q ss_pred cCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
++||.|+ | +||.|+... ....++||.+.... .......+.+|+..++.++||||+++++.+... ..
T Consensus 1 ~~lg~G~fg--~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--------~~ 69 (269)
T cd05042 1 DEIGNGWFG--KVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--------IP 69 (269)
T ss_pred CcCCccCCc--eEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--------Cc
Confidence 3578887 8 899997543 34578888775432 233445678899999999999999999998763 37
Q ss_pred EEEEecCC--cChHHHHHHhCcC--CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 148 (269)
T cd05042 70 YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-ADFIHSDLALRNCQLTADLSVKIGDYGLAL 148 (269)
T ss_pred eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh-cCEecccccHhheEecCCCcEEEecccccc
Confidence 99999999 5899998775421 111234456669999999999995 899999999999999999999999999986
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCcccccccccc-ccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----hh----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR---- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l~---- 247 (778)
......... .......+..|+|||+....... ....++.++|+|||||++|||++ |..||.... +.
T Consensus 149 ~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 224 (269)
T cd05042 149 EQYPEDYYI----TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVR 224 (269)
T ss_pred ccccchhee----ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhh
Confidence 543321100 01111234479999997542111 12345779999999999999998 566654221 11
Q ss_pred cc----------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 NT----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~~----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ..++..+...+..|+ .+|.+||++.++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 225 EQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred ccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 00 123444566677776 599999999998763
No 350
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.96 E-value=6.1e-28 Score=271.08 Aligned_cols=243 Identities=16% Similarity=0.160 Sum_probs=183.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~ 88 (778)
++..+|.+++.||.|+ | .||+|+++ ..+..|+||++...... ...+.+.+|+++|..+. ||||+++++.+
T Consensus 34 ~~~~~~~~~~~lG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFG--RVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred ecHHHeehhhhccCCCce--eEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 4555788999999998 8 89999964 34568999999764322 33456889999999997 99999999998
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------------------------------------------
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------------------------------- 122 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------------------------------------- 122 (778)
..+ ..+||||||| ++|.++|......
T Consensus 111 ~~~--------~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T cd05107 111 TKG--------GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMS 182 (401)
T ss_pred ccC--------CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccC
Confidence 764 3799999999 6899998754210
Q ss_pred ---------------------------------------------------CCcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 123 ---------------------------------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 123 ---------------------------------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
.......+..++.||+.||.|||+ .+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iv 261 (401)
T cd05107 183 KDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS-KNCV 261 (401)
T ss_pred CccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcC
Confidence 000111234457899999999995 8999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.++.+||+|||+++......... ......++..|++||.+.+ ..+..++|+|||||++
T Consensus 262 Hrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGvil 331 (401)
T cd05107 262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNYI----SKGSTFLPLKWMAPESIFN------NLYTTLSDVWSFGILL 331 (401)
T ss_pred cccCCcceEEEeCCCEEEEEecCcceecccccccc----cCCCcCCCCceeChHHhcC------CCCCcHhHHHHHHHHH
Confidence 99999999999999999999999988654321100 0111123457999999875 3466789999999999
Q ss_pred HHHHh-CCCCCChhh----h----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 232 YELFS-GMRLSKTEE----L----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 232 yel~t-g~~p~~~~~----l----~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|||++ |+.||.... . . ....++..+.+++.+|+..+|..||++.++++.
T Consensus 332 ~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 332 WEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99998 777764311 0 0 012345678899999999999999999999875
No 351
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95 E-value=1.2e-27 Score=258.36 Aligned_cols=239 Identities=17% Similarity=0.187 Sum_probs=181.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...|++.+.||.|+ | .||+|+++.+|. .|++|.+..... ......+.+|+.+++.++||||+++++.+...
T Consensus 6 ~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFG--TVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred hhhceeccccccCCCc--cEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 45688999999998 8 899999988876 468888764322 23334578999999999999999999988642
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..++++||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 82 --------~~~~v~e~~~~g~l~~~~~~~~~~--~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dikp~Nill~~~~~~kL 150 (303)
T cd05110 82 --------TIQLVTQLMPHGCLLDYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKSPNHVKI 150 (303)
T ss_pred --------CceeeehhcCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHhh-cCeeccccccceeeecCCCceEE
Confidence 467899999 5798888764321 1233455568999999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh---h
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---L 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~---l 246 (778)
+|||+++.+...... ........+..|++||++.+ ..++.++|+|||||++||+++ |+.|+.... .
T Consensus 151 ~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~------~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~ 220 (303)
T cd05110 151 TDFGLARLLEGDEKE----YNADGGKMPIKWMALECIHY------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 220 (303)
T ss_pred ccccccccccCcccc----cccCCCccccccCCHHHhcc------CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999876542211 11111223458999999875 356788999999999999997 777764321 1
Q ss_pred h----c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~----~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. . ....+..+..++.+|+..+|..||++.++++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l 265 (303)
T cd05110 221 PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 265 (303)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1 0 112345678889999999999999999988753
No 352
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.95 E-value=2.1e-28 Score=246.84 Aligned_cols=238 Identities=15% Similarity=0.154 Sum_probs=186.0
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~ 98 (778)
.++...+|.|. | +|++++.+++|...|||.+.+..+.+ ..+++...+.++.... .|+|++++++|..+.
T Consensus 94 l~~l~dlGsGtcG--~V~k~~~rs~~~iiAVK~M~rt~Nke-e~kRILmDldvv~~s~dcpyIV~c~GyFi~n~------ 164 (391)
T KOG0983|consen 94 LENLGDLGSGTCG--QVWKMRFRSTGHIIAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGYFITNT------ 164 (391)
T ss_pred hhhHHhhcCCCcc--ceEEEEEcccceEEEEEeecccCCHH-HHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc------
Confidence 44556788888 8 99999999999999999998765444 4556777777665554 899999999999854
Q ss_pred ccEEEEEecCCcC-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++|.||.+.. +..+++.... ...+.++-.+...+++||.||..+.+++||||||+||++++.|++||||||++.
T Consensus 165 --dV~IcMelMs~C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsG 240 (391)
T KOG0983|consen 165 --DVFICMELMSTCAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISG 240 (391)
T ss_pred --hHHHHHHHHHHHHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccc
Confidence 78999999854 5555554322 123344555688999999999998999999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----h----hc
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L----RN 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l----~~ 248 (778)
.+.+.. .+....+-..||+||.+...- +..|+..+|+||||+.++||.+|+.||.... + .+
T Consensus 241 rlvdSk-------AhtrsAGC~~YMaPERidp~~---~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ 310 (391)
T KOG0983|consen 241 RLVDSK-------AHTRSAGCAAYMAPERIDPPD---KPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE 310 (391)
T ss_pred eeeccc-------ccccccCCccccCccccCCCC---CCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc
Confidence 886632 122234445899999986531 2467789999999999999999999886421 1 11
Q ss_pred -------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
-..+++.+.+++..||..|+.+||...++|+|+
T Consensus 311 ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 311 EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 123556678889999999999999999999998
No 353
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=8.1e-28 Score=252.67 Aligned_cols=238 Identities=18% Similarity=0.238 Sum_probs=182.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+|.+.+.||.|+ | +||++++...+..+.+|++..... .......+..|+.+++.++||||+++++.+...
T Consensus 1 ~y~i~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 74 (260)
T cd08222 1 RYILQQRLGKGSFG--TVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER---- 74 (260)
T ss_pred CceeeeeecCCCCc--eEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC----
Confidence 589999999998 8 899999988877787777664221 122334567889999999999999999998763
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...|+|+||+ ++|..++...... .......+..++.|++.||.|||+ .+++|+||+|+||+++. +.+||+|
T Consensus 75 ----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 75 ----DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ-RRILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred ----CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCChhheEeec-CCEeecc
Confidence 3789999999 4788887653221 222344456669999999999995 89999999999999975 6799999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++.......... ....+...|++||...+ ..++.++|+||||+++|+|++|..++.......
T Consensus 149 ~g~~~~~~~~~~~~------~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~ 216 (260)
T cd08222 149 FGVSRLLMGSCDLA------TTFTGTPYYMSPEALKH------QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR 216 (260)
T ss_pred cCceeecCCCcccc------cCCCCCcCccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 99987764422111 11123457999998765 345678999999999999999998876432211
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 258 (260)
T cd08222 217 IVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNP 258 (260)
T ss_pred HHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCC
Confidence 123556788899999999999999999999998
No 354
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-29 Score=297.81 Aligned_cols=245 Identities=18% Similarity=0.279 Sum_probs=199.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+++.-+..+|.|. | .||.|...++|+..|+|.+..........+.+.+|.++|..|+|||+++|+++-..
T Consensus 1234 ~~rWqrg~~Ig~G~fG--~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH------ 1305 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFG--KVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH------ 1305 (1509)
T ss_pred eeeeccccccCCccee--eeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec------
Confidence 46788888899988 8 99999999999999999998765555667889999999999999999999998655
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+||.|||| +.|.+.++..+... +...+|+..|++.||.|||+ .+||||||||.|||++.+|.+|++|||
T Consensus 1306 --Rekv~IFMEyC~~GsLa~ll~~gri~d---E~vt~vyt~qll~gla~LH~-~gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1306 --REKVYIFMEYCEGGSLASLLEHGRIED---EMVTRVYTKQLLEGLAYLHE-HGIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred --HHHHHHHHHHhccCcHHHHHHhcchhh---hhHHHHHHHHHHHHHHHHHh-cCceecCCCccceeeecCCcEEeeccc
Confidence 34799999999 67998887755322 33467889999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------- 245 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--------- 245 (778)
.+..+...-....+.+ ....+++.|||||++.+.-. ++..-+.|||||||++.||.+|+.|+..-+
T Consensus 1380 sa~ki~~~~~~~~~el--~~~~GT~~YMAPEvit~t~~---kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V 1454 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGEL--QSMMGTPMYMAPEVITGTKG---KGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV 1454 (1509)
T ss_pred ceeEecCchhcCCHHH--HhhcCCchhcCchhhccccc---CCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH
Confidence 9988876421111111 23466779999999986421 456679999999999999999998874211
Q ss_pred -hhccCCCCcch----HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -LRNTASIPKSL----LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l~~~~~iP~~L----~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++|..+ ++.+.+||..||++|.++.++++|.
T Consensus 1455 ~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1455 AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 12345677665 5668999999999999999999986
No 355
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.95 E-value=3e-27 Score=250.04 Aligned_cols=238 Identities=15% Similarity=0.181 Sum_probs=171.3
Q ss_pred CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | .||+|+... ++..+++|.+...... .....+.+|+..++.++||||+++++.+... ..+
T Consensus 2 ~lg~G~~g--~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~ 70 (269)
T cd05087 2 EIGNGWFG--KVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--------TPY 70 (269)
T ss_pred cccccCCc--eEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--------CCc
Confidence 578887 7 899998653 4567999988754332 2334688899999999999999999988753 378
Q ss_pred EEEecCC--cChHHHHHHhCcCC--CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 103 YIVTEPV--MPLSEKIKELGLEG--SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~--~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++|+||||+||+++.++.+||+|||++..
T Consensus 71 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~ 149 (269)
T cd05087 71 LLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-NNFIHSDLALRNCLLTADLTVKIGDYGLSHN 149 (269)
T ss_pred EEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCCcEEECCcccccc
Confidence 9999999 57999987643211 11223345568899999999995 8999999999999999999999999999875
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccc-cccCCCCCcchhHHHHHHHHHHHh-CCCCCChh---hh-----hc
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-AVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE---EL-----RN 248 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~---~l-----~~ 248 (778)
...... ........++..|+|||++.+... .....++.++|+|||||++|||++ |..||... +. ..
T Consensus 150 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 225 (269)
T cd05087 150 KYKEDY----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE 225 (269)
T ss_pred ccCcce----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc
Confidence 433211 000111233457999999864211 011235678999999999999996 88777421 10 00
Q ss_pred -c---------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -T---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -~---------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ...++.+..++++|+ .+|.+||++++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~ 266 (269)
T cd05087 226 QQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLL 266 (269)
T ss_pred ccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence 0 123455677888888 689999999998753
No 356
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=8e-29 Score=254.50 Aligned_cols=240 Identities=15% Similarity=0.191 Sum_probs=190.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+-..+|++.+.+|.|. | +|..++.|.+++.+|||++.+...-. ........|-++|+..+||.+..+-.+|.+.
T Consensus 165 vTm~dFdfLKvLGkGTFG--KVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~-- 240 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFG--KVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ-- 240 (516)
T ss_pred eccchhhHHHHhcCCccc--eEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC--
Confidence 4456889999999999 9 99999999999999999998754322 3345566788999999999999998889874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.++|+||||+ +.|..+|.+........ -..+...|+.||.|||+ .+||+||||.+|.+++.+|++||.
T Consensus 241 ------drlCFVMeyanGGeLf~HLsrer~FsE~R---tRFYGaEIvsAL~YLHs-~~ivYRDlKLENLlLDkDGHIKit 310 (516)
T KOG0690|consen 241 ------DRLCFVMEYANGGELFFHLSRERVFSEDR---TRFYGAEIVSALGYLHS-RNIVYRDLKLENLLLDKDGHIKIT 310 (516)
T ss_pred ------ceEEEEEEEccCceEeeehhhhhcccchh---hhhhhHHHHHHhhhhhh-CCeeeeechhhhheeccCCceEee
Confidence 4899999999 56888887755332222 33448899999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----- 246 (778)
|||+|..--..+ -....+++++.|.|||++.. ..|..++|+|++|++||||++|+.||...+-
T Consensus 311 DFGLCKE~I~~g------~t~kTFCGTPEYLAPEVleD------nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFe 378 (516)
T KOG0690|consen 311 DFGLCKEEIKYG------DTTKTFCGTPEYLAPEVLED------NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFE 378 (516)
T ss_pred ecccchhccccc------ceeccccCChhhcCchhhcc------ccccceeehhhhhHHHHHHHhccCcccccchhHHHH
Confidence 999998644321 12344677889999999987 4788999999999999999999988754321
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 247 -------~~~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
+-...+.+....++..||..+|++|+. +.++.+|.
T Consensus 379 LIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 379 LILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred HHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 112344455667788899999999985 45666664
No 357
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.95 E-value=1.2e-27 Score=255.62 Aligned_cols=239 Identities=15% Similarity=0.237 Sum_probs=182.7
Q ss_pred CceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~--~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+|++.+.+|.|+ | .||.+++. .+++.|+||++.+.... ....+.+.+|++++++++ ||||+++++.++..
T Consensus 1 ~~~~~~~ig~G~~~--~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~- 77 (288)
T cd05583 1 NFELLRVLGTGAYG--KVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD- 77 (288)
T ss_pred CceEEEEeccCCCc--eEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC-
Confidence 489999999998 8 89988754 46789999999753221 234556789999999994 99999999999763
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+|+||||+ ++|.+++..... .....+..++.|++.+|.|||+ .+++||||+|.||+++.++.+||
T Consensus 78 -------~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~ql~~~l~~lH~-~~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 78 -------TKLHLILDYVNGGELFTHLYQREH---FTESEVRVYIAEIVLALDHLHQ-LGIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred -------CEEEEEEecCCCCcHHHHHhhcCC---cCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEE
Confidence 3899999999 478888765432 2233455668899999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++..+...... ......+...|++||...+.. ...+.++|+||||+++|||++|..|+....
T Consensus 147 ~dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 217 (288)
T cd05583 147 TDFGLSKEFLAEEEE-----RAYSFCGTIEYMAPEVIRGGS----GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ 217 (288)
T ss_pred EECcccccccccccc-----ccccccCCccccCHHHhcCCC----CCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH
Confidence 999998765432111 111123455899999976531 235678999999999999999998874211
Q ss_pred --h-----hc----cCCCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 246 --L-----RN----TASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 246 --l-----~~----~~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
+ .. ...++..+.+++.+||+.+|..||+ +.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 218 SEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 01 1235667888999999999999998 46778887
No 358
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.95 E-value=7.1e-27 Score=251.35 Aligned_cols=248 Identities=10% Similarity=0.041 Sum_probs=180.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhH---------HHHHHHHHHHHhcCCCCCee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGH---------LAAARNGVKRLRTVRHPNIL 82 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~---------~~~~~~ev~~Lk~LrHPnIl 82 (778)
+....|.+.+.||.|+ | +||+|.++.+ +..+++|+.......-.. ......++..++.+.|+||+
T Consensus 9 i~~~~y~i~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFG--CVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred cCCCceEEeeEEecCCCc--eEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 3456899999999999 9 9999999887 667778765433221100 01122344556778899999
Q ss_pred eEeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeE
Q 004025 83 AFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (778)
Q Consensus 83 k~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~ 161 (778)
+++++....... ..+.|+++|++ ..+.+.++..... ....+..++.||+.||.|||+ .+++||||||+||+
T Consensus 87 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~qi~~~l~~lH~-~~iiHrDiKp~Nil 158 (294)
T PHA02882 87 KYYGCGSFKRCR----MYYRFILLEKLVENTKEIFKRIKCK---NKKLIKNIMKDMLTTLEYIHE-HGISHGDIKPENIM 158 (294)
T ss_pred cEEEeeeEecCC----ceEEEEEEehhccCHHHHHHhhccC---CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEE
Confidence 999977654311 23568899988 4566666553211 234466779999999999995 89999999999999
Q ss_pred EcCCCcEEEEecccccccCCCCCCCCCC-ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 162 VTQTLDWKLHAFDVLSEFDGNNEAANGP-MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 162 v~~~g~~KL~dFgla~~~~~~~~~~~~~-~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
++.++.+||+|||+++.+.......... .......++..|+|||+..+ ..++.++|+|||||++|||++|..|
T Consensus 159 l~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~------~~~~~~~DiwSlG~~l~el~~g~~P 232 (294)
T PHA02882 159 VDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG------ACVTRRGDLESLGYCMLKWAGIKLP 232 (294)
T ss_pred EcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC------CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999998765322111000 00111235568999999876 3577899999999999999999999
Q ss_pred CChhh-------------hh-------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 241 SKTEE-------------LR-------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 241 ~~~~~-------------l~-------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
|.... .. .+...|+.+.+.++.|+..+|.+||+.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 233 WKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 85321 01 12456788999999999999999999999875
No 359
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95 E-value=3.2e-27 Score=247.28 Aligned_cols=225 Identities=16% Similarity=0.164 Sum_probs=170.5
Q ss_pred cCCCCCC-CceEEEEeEECCCC----------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDG----------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g----------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+.||.|+ | .||+|+++.++ ..|++|.+..... ....+.+|+.+|+.++||||+++++.+.. .
T Consensus 1 ~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 73 (259)
T cd05037 1 EHLGQGTFT--NIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-D- 73 (259)
T ss_pred Ccccccccc--eEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-C-
Confidence 4578887 7 89999998776 3577887664321 15678899999999999999999998875 2
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-----
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----- 166 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g----- 166 (778)
..|+|+||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++
T Consensus 74 -------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~~~~ 143 (259)
T cd05037 74 -------ENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLED-KKLVHGNVCGKNILVARYGLNEGY 143 (259)
T ss_pred -------CcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhh-CCeecccCccceEEEecCccccCC
Confidence 469999999 579999887542 12233455668999999999995 9999999999999999888
Q ss_pred --cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC-CCCCCh
Q 004025 167 --DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKT 243 (778)
Q Consensus 167 --~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~ 243 (778)
.+||+|||++....... .......|++||++.+.- ..++.++|+|||||++|+|++| ..++..
T Consensus 144 ~~~~kl~Dfg~a~~~~~~~----------~~~~~~~y~aPE~~~~~~----~~~~~~~Di~slG~~~~~l~~~~~~p~~~ 209 (259)
T cd05037 144 VPFIKLSDPGIPITVLSRE----------ERVERIPWIAPECIRNGQ----ASLTIAADKWSFGTTLLEICSNGEEPLST 209 (259)
T ss_pred ceeEEeCCCCccccccccc----------ccccCCCccChhhhcCCC----CCcchhhHHHHHHHHHHHHHhCCCCCccc
Confidence 79999999988754311 112334799999987521 2567789999999999999995 455432
Q ss_pred hhh-------hccC--CC--CcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 244 EEL-------RNTA--SI--PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 244 ~~l-------~~~~--~i--P~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
... .... .. ...+.+++.+||..+|.+||++.++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 257 (259)
T cd05037 210 LSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRD 257 (259)
T ss_pred CCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 211 0011 11 2467888999999999999999998864
No 360
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.95 E-value=4.3e-27 Score=250.37 Aligned_cols=225 Identities=17% Similarity=0.149 Sum_probs=166.4
Q ss_pred CCCCCC-CceEEEEeEECCC------------------------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004025 26 PYPSAW-GSWSHFQGTSKDD------------------------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~------------------------g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn 80 (778)
.||+|+ | .||+|+...+ ...|+||++.... ......+.+|+.+++.++|||
T Consensus 2 ~lG~G~~~--~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRT--NIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCccccc--ceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCC
Confidence 578887 7 8999875322 1358888886432 223456778899999999999
Q ss_pred eeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 81 Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
|+++++++..+ ...|+||||+ ++|..++..... .........++.||+.||.|||+ .+++||||||+
T Consensus 78 iv~~~~~~~~~--------~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~ 146 (274)
T cd05076 78 LAFVHGVCVRG--------SENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLED-KNLVHGNVCAK 146 (274)
T ss_pred eeeEEEEEEeC--------CceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcc
Confidence 99999998764 3789999999 478888765321 12234455669999999999995 89999999999
Q ss_pred CeEEcCCC-------cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 159 SVVVTQTL-------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 159 NI~v~~~g-------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||+++..| .+||+|||++....... ....+..|+|||.+.+. ..++.++|+|||||++
T Consensus 147 Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~----------~~~~~~~~~aPe~~~~~-----~~~~~~~Dv~slG~~l 211 (274)
T cd05076 147 NILLARLGLAEGTSPFIKLSDPGVSFTALSRE----------ERVERIPWIAPECVPGG-----NSLSTAADKWSFGTTL 211 (274)
T ss_pred cEEEeccCcccCccceeeecCCcccccccccc----------ccccCCcccCchhhcCC-----CCCCcHHHHHHHHHHH
Confidence 99998654 38999999875443211 11234579999988653 3467789999999999
Q ss_pred HHHH-hCCCCCChhh-------hhccCC----CCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 232 YELF-SGMRLSKTEE-------LRNTAS----IPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 232 yel~-tg~~p~~~~~-------l~~~~~----iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
||++ .|..|+.... ...... .+..+.+++.+||+.+|.+||++.+++++
T Consensus 212 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 212 LEICFDGEVPLKERTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHhCCCCCccccChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 9995 6777764321 111112 23458889999999999999999999875
No 361
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=1.1e-26 Score=246.06 Aligned_cols=238 Identities=15% Similarity=0.175 Sum_probs=168.4
Q ss_pred CCCCCC-CceEEEEeEECCCC--CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDG--SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g--~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
+||.|+ | +||+|....++ ..+++|.+..... ....+.+.+|+..++.++||||+++++.+... ..+
T Consensus 2 ~lg~G~~g--~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--------~~~ 70 (268)
T cd05086 2 EIGNGWFG--KVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--------IPY 70 (268)
T ss_pred cCCCCcCc--eEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCC--------Ccc
Confidence 578887 8 89999754333 3566777654322 23456788999999999999999999998763 378
Q ss_pred EEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 103 YIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
|+||||+ ++|.+++.+.... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~ 149 (268)
T cd05086 71 LLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSR 149 (268)
T ss_pred EEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCeeccCCccceEEEcCCccEEeccccccccc
Confidence 9999999 5899998764321 122233456679999999999995 89999999999999999999999999987543
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccc-cccCCCCCcchhHHHHHHHHHHHhC-CCCCChhh----hh----c-
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-AVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEE----LR----N- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~~~----l~----~- 248 (778)
....... ......++..|+|||++..... .....++.++|+|||||++|||+++ ..|+.... +. .
T Consensus 150 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 225 (268)
T cd05086 150 YKEDYIE----TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ 225 (268)
T ss_pred Ccchhhh----cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc
Confidence 2211000 0111234458999999754211 1123456789999999999999974 55653211 10 0
Q ss_pred c---------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 T---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ~---------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ..++..+.+++++|+ .+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 226 QVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred ccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 0 123344667788888 679999999998753
No 362
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=4.2e-27 Score=244.87 Aligned_cols=213 Identities=15% Similarity=0.163 Sum_probs=166.6
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cCh
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPL 112 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L 112 (778)
+||.++++.+++.|++|.+.+.. ...+|...+....||||+++++.+... ..+|+||||+ ++|
T Consensus 8 ~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L 72 (237)
T cd05576 8 KVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSE--------DSVFLVLQHAEGGKL 72 (237)
T ss_pred eEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecC--------CeEEEEEecCCCCCH
Confidence 89999999999999999997642 122344555666799999999999863 4899999999 579
Q ss_pred HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccc
Q 004025 113 SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192 (778)
Q Consensus 113 ~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~ 192 (778)
.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|..+|+|||.+.......
T Consensus 73 ~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~--------- 139 (237)
T cd05576 73 WSHISKFLN---IPEECVKRWAAEMVVALDALHR-EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC--------- 139 (237)
T ss_pred HHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc---------
Confidence 888876532 2344566779999999999995 899999999999999999999999999876654321
Q ss_pred cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------ccCCCCcchHHHHHHHh
Q 004025 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------NTASIPKSLLPDYQRLL 264 (778)
Q Consensus 193 ~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~~~~iP~~L~~~i~~lL 264 (778)
........|++||...+ ..++.++|+|||||++|||++|..++...... ....++..+.+++.+||
T Consensus 140 ~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 140 DGEAVENMYCAPEVGGI------SEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred ccCCcCccccCCcccCC------CCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHc
Confidence 01122347999998765 34567899999999999999998765432110 11235566788999999
Q ss_pred ccCCCCCCCh-----HHHHhcc
Q 004025 265 SSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 265 ~~dP~~Rps~-----~~lL~~~ 281 (778)
+.||.+|+++ .++++|+
T Consensus 214 ~~dp~~R~~~~~~~~~~~~~h~ 235 (237)
T cd05576 214 QFNPTERLGAGVAGVEDIKSHP 235 (237)
T ss_pred cCCHHHhcCCCccchHHHHcCC
Confidence 9999999986 8999997
No 363
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-28 Score=283.02 Aligned_cols=245 Identities=16% Similarity=0.154 Sum_probs=200.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|+|.+.||.|. | .|+.++++.+++.||+|++++-..- ......++.|-.+|---..+-|+.++..|.++
T Consensus 72 l~~~DfeilKvIGrGaFG--EV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~-- 147 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFG--EVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE-- 147 (1317)
T ss_pred CCHHhhHHHHHhcccccc--eeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc--
Confidence 4556899999999999 9 9999999999999999999862111 12344678888889888899999999999975
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.++|+||||+ |+|-.++.+.. ...+.+.++++..|+-||.-||+ .|+|||||||+||+++..|++||+
T Consensus 148 ------~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~-mgyVHRDiKPDNvLld~~GHikLA 217 (1317)
T KOG0612|consen 148 ------RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS-MGYVHRDIKPDNVLLDKSGHIKLA 217 (1317)
T ss_pred ------cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh-ccceeccCCcceeEecccCcEeec
Confidence 4999999999 68999998876 23466778889999999999995 999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc--
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT-- 249 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~-- 249 (778)
|||-|-.+..++ .+.....++++.|.+||++...-. -+..|+..+|+||||++||||+.|..||..+.+..+
T Consensus 218 DFGsClkm~~dG-----~V~s~~aVGTPDYISPEvLqs~~~-~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~ 291 (1317)
T KOG0612|consen 218 DFGSCLKMDADG-----TVRSSVAVGTPDYISPEVLQSQGD-GKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYG 291 (1317)
T ss_pred cchhHHhcCCCC-----cEEeccccCCCCccCHHHHHhhcC-CccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHH
Confidence 999998887643 344445678889999999875321 135688899999999999999999999987655322
Q ss_pred --------CCCC------cchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 250 --------ASIP------KSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 250 --------~~iP------~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
..+| ....+++++++. +|..|+. +++|..||
T Consensus 292 KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 292 KIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred HHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 2344 556777888765 5777887 99999998
No 364
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1e-27 Score=274.91 Aligned_cols=241 Identities=17% Similarity=0.234 Sum_probs=190.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+..+-.+.+++|+|. | +||+|..-. +...|+||.++... .......|++|+..|..|+|||||++++++..
T Consensus 484 ~r~~i~~~~eLGegaFG--kVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFG--KVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred chhheeehhhhcCchhh--hhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 334566678899999 9 999998643 33679999997653 33456789999999999999999999999986
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC------C-C----cchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE------G-S----QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~------~-~----~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
. .-+|+|+||+ |+|.++|+..... + . .....+..+..||+.||.||-+ ..+|||||-.
T Consensus 561 ~--------~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLAT 631 (774)
T KOG1026|consen 561 G--------DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLAT 631 (774)
T ss_pred C--------CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhh
Confidence 3 4799999999 8999999875421 1 1 2233466779999999999996 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
.|++|.++..+||+|||+++.+-..+.... ......+.+|||||.+..+ .++.++||||+|++|||+|+
T Consensus 632 RNCLVge~l~VKIsDfGLsRdiYssDYYk~----~~~t~lPIRWMppEsIly~------kFTteSDVWs~GVvLWEIFsy 701 (774)
T KOG1026|consen 632 RNCLVGENLVVKISDFGLSRDIYSSDYYKV----RGNTLLPIRWMPPESILYG------KFTTESDVWSFGVVLWEIFSY 701 (774)
T ss_pred hhceeccceEEEecccccchhhhhhhhhcc----cCCceeeeecCCHHHhhcC------cccchhhhhhhhhhhhhhhcc
Confidence 999999999999999999998765321110 1123455699999999874 78899999999999999999
Q ss_pred CCCCCCh---hh----------hhccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 237 GMRLSKT---EE----------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 237 g~~p~~~---~~----------l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
|..|+.. ++ +.....+|.++..++.+||+.+|++||++.++-.
T Consensus 702 G~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~ 757 (774)
T KOG1026|consen 702 GKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS 757 (774)
T ss_pred ccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 4444321 11 1223578999999999999999999999998743
No 365
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=3e-28 Score=263.07 Aligned_cols=236 Identities=21% Similarity=0.340 Sum_probs=186.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC------CCCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR------HPNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr------HPnIlk~~d~~e~ 90 (778)
+.+|.+....|.|- + +|..|.+..-|..||||+|..+ +...+.-+.|+.+|++|. --++|+++..|..
T Consensus 431 D~RY~V~~~~GkGvFs--~Vvra~D~~r~~~vAiKIIRnN---E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFS--TVVRARDQARGQEVAIKIIRNN---EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred cceeEEEeccccceee--eeeeccccCCCCeeEEEEeecc---hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 34555555555554 4 8999999988999999999743 444556778999999996 2368899888876
Q ss_pred cccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcE
Q 004025 91 ENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~ 168 (778)
.+++|+|+|.+ ..|.++|+..+..-......+..+.+|++-||..|.+ |+++|+||||+||+|+++ ..+
T Consensus 506 --------knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 506 --------KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred --------cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEeccCccee
Confidence 45999999999 7999999998865444445577779999999999995 999999999999999965 458
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--- 245 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--- 245 (778)
||||||.+....... + ..+++..-|.|||++.| ..|.+.+|+||.||.|||||+|+.+|....
T Consensus 577 KLCDfGSA~~~~ene------i--tPYLVSRFYRaPEIiLG------~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ 642 (752)
T KOG0670|consen 577 KLCDFGSASFASENE------I--TPYLVSRFYRAPEIILG------LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ 642 (752)
T ss_pred eeccCcccccccccc------c--cHHHHHHhccCcceeec------CcccCCccceeeceeeEEeeccceecCCCCcHH
Confidence 999999998876532 1 12366678999999998 578899999999999999999987763210
Q ss_pred -h---------------h-------------c---------------------------------cCCCCc-------ch
Q 004025 246 -L---------------R-------------N---------------------------------TASIPK-------SL 256 (778)
Q Consensus 246 -l---------------~-------------~---------------------------------~~~iP~-------~L 256 (778)
| + + ...+|. .|
T Consensus 643 MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~ 722 (752)
T KOG0670|consen 643 MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQL 722 (752)
T ss_pred HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHH
Confidence 0 0 0 011232 36
Q ss_pred HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 257 LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 257 ~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+++.+||..||.+|.++.+.|.||
T Consensus 723 rdLLdkml~LdP~KRit~nqAL~Hp 747 (752)
T KOG0670|consen 723 RDLLDKMLILDPEKRITVNQALKHP 747 (752)
T ss_pred HHHHHHHhccChhhcCCHHHHhcCC
Confidence 6778899999999999999999998
No 366
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.95 E-value=3.7e-27 Score=258.79 Aligned_cols=232 Identities=16% Similarity=0.213 Sum_probs=185.1
Q ss_pred eccCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+++.||.|. | .||+|+...- .-.||||..+.....+ ..+.+..|.-+++.++||||+++++++++.
T Consensus 393 l~r~iG~GqFG--dVy~gvYt~~~kge~iaVAvKtCK~d~t~d-~tekflqEa~iMrnfdHphIikLIGv~~e~------ 463 (974)
T KOG4257|consen 393 LKRLIGEGQFG--DVYKGVYTDPEKGERIAVAVKTCKTDCTPD-DTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------ 463 (974)
T ss_pred HHHhhcCCccc--ceeeeEecccccCcceeeeeehhccCCChh-hHHHHHHHHHHHHhCCCcchhheeeeeecc------
Confidence 345678888 8 8999987433 3469999987654443 377899999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
-++||||.+ |.|..||+..+..- .-..+..+++||+.||.|||+ .++|||||-..||+|.....+||+|||+
T Consensus 464 ---P~WivmEL~~~GELr~yLq~nk~sL--~l~tL~ly~~Qi~talaYLeS-krfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 464 ---PMWIVMELAPLGELREYLQQNKDSL--PLRTLTLYCYQICTALAYLES-KRFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred ---ceeEEEecccchhHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhheeecCcceeeecccch
Confidence 699999999 78999999865322 233455669999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCh-----------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT----------- 243 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~----------- 243 (778)
++.+.++.. +.......+..||+||.+.- ...+.++|+|.||+.|||++. |..||..
T Consensus 538 SR~~ed~~y-----YkaS~~kLPIKWmaPESINf------RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE 606 (974)
T KOG4257|consen 538 SRYLEDDAY-----YKASRGKLPIKWMAPESINF------RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE 606 (974)
T ss_pred hhhccccch-----hhccccccceeecCccccch------hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec
Confidence 999877421 11112223448999999876 467889999999999999987 6666642
Q ss_pred --hhhhccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 244 --EELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 244 --~~l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+.+....++|+.|..++.+||..+|.+||.+.++...
T Consensus 607 nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~ 645 (974)
T KOG4257|consen 607 NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAI 645 (974)
T ss_pred CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHH
Confidence 1222336788899999999999999999999888654
No 367
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.3e-28 Score=263.34 Aligned_cols=236 Identities=14% Similarity=0.164 Sum_probs=196.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+.++...+|.|+ | .|-.++.+.....+|+|++++....+ .+.+.+.+|-++|..++.|.|+++|.+|.++
T Consensus 420 ~dl~~iaTLGvGgFG--RVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~----- 492 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFG--RVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS----- 492 (732)
T ss_pred hhhhhhhhcccCccc--eEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc-----
Confidence 3566667788888 8 78777776666678999998764433 5677889999999999999999999999874
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++|+.||.| +.|...|+.++....... +.++.-+++|+.|||. .+||+|||||+|.+++.+|-+||.|||
T Consensus 493 ---kyvYmLmEaClGGElWTiLrdRg~Fdd~ta---rF~~acv~EAfeYLH~-k~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 493 ---KYVYMLMEACLGGELWTILRDRGSFDDYTA---RFYVACVLEAFEYLHR-KGIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred ---hhhhhhHHhhcCchhhhhhhhcCCcccchh---hhhHHHHHHHHHHHHh-cCceeccCChhheeeccCCceEEeehh
Confidence 4999999999 579999998875544333 3348899999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
+++.+.... ....+++++.|.|||++.+ ++.+.++|.|+||++||||++|.+||...+...
T Consensus 566 FAKki~~g~-------KTwTFcGTpEYVAPEIILn------KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL 632 (732)
T KOG0614|consen 566 FAKKIGSGR-------KTWTFCGTPEYVAPEIILN------KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL 632 (732)
T ss_pred hHHHhccCC-------ceeeecCCcccccchhhhc------cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence 999987632 3556788889999999987 578899999999999999999999997543221
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
...|++...+++++|+..+|..|+. +.++-+|.
T Consensus 633 kGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 633 KGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred hhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence 1467788899999999999999986 57777776
No 368
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.7e-27 Score=257.40 Aligned_cols=234 Identities=20% Similarity=0.256 Sum_probs=173.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|.-...||.|+ | +||+|... +|..||||.+....... ...+.+|+.+|.+++|||+++++++|.+.+
T Consensus 76 ~Fs~~~~ig~Ggfg--~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------ 144 (361)
T KOG1187|consen 76 NFSESNLIGEGGFG--TVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------ 144 (361)
T ss_pred CCchhcceecCCCe--EEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC------
Confidence 444456788887 7 89999976 45999999887654331 334999999999999999999999998642
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEEEEecc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+||+||+ ++|.++|...... ...-..-..++.++++||.|||+.+. |||||||++|||+++++..||+|||
T Consensus 145 -~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFG 222 (361)
T KOG1187|consen 145 -EHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFG 222 (361)
T ss_pred -ceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCcc
Confidence 1589999999 6899998775431 11111122348899999999998774 9999999999999999999999999
Q ss_pred cccccCC-CCCCCCCCcccccc-ccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------h
Q 004025 175 VLSEFDG-NNEAANGPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------L 246 (778)
Q Consensus 175 la~~~~~-~~~~~~~~~~~~~~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------l 246 (778)
++..... ... .... .++..|++||+...+ ..+.++|+||||+++.|+++|+.+.+... +
T Consensus 223 La~~~~~~~~~-------~~~~~~gt~gY~~PEy~~~g------~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l 289 (361)
T KOG1187|consen 223 LAKLGPEGDTS-------VSTTVMGTFGYLAPEYASTG------KLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSL 289 (361)
T ss_pred CcccCCccccc-------eeeecCCCCccCChhhhccC------CcCcccccccchHHHHHHHhCCcccCCCCCcccccH
Confidence 9965433 110 0001 345589999998763 56789999999999999999997654211 0
Q ss_pred -------------hcc-------CCCC--cc---hHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 -------------RNT-------ASIP--KS---LLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 -------------~~~-------~~iP--~~---L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
..+ ...+ +. +..+-.+|++.+|..||+..++++
T Consensus 290 ~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 290 VEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 000 1222 12 223346899999999999988754
No 369
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3e-27 Score=263.36 Aligned_cols=236 Identities=16% Similarity=0.233 Sum_probs=183.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCC---c-EEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS---P-VSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~-VaIK~~~~~~-~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+-+++++||+|. | .||+|+.+..+. . ||||....+. ........+.+|.+++++|+||||++++++...+
T Consensus 158 ~v~l~kkLGeGaFG--eV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~-- 233 (474)
T KOG0194|consen 158 DIELGKKLGEGAFG--EVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE-- 233 (474)
T ss_pred Cccccceeeccccc--EEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--
Confidence 444567899999 9 999999876533 3 8999988633 4456677899999999999999999999988764
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.-+|||||+| |+|.++|+..+.. .......+++++.+.||.|||. .+++||||-..|++++.++.+||+
T Consensus 234 ------~Pl~ivmEl~~gGsL~~~L~k~~~~--v~~~ek~~~~~~AA~Gl~YLh~-k~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 234 ------EPLMLVMELCNGGSLDDYLKKNKKS--LPTLEKLRFCYDAARGLEYLHS-KNCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred ------CccEEEEEecCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHhHHHHHHH-CCCcchhHhHHHheecCCCeEEeC
Confidence 3699999999 6899999987631 1222344569999999999995 999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc--
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN-- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~-- 248 (778)
|||+++.-... .+.....-.+.+|+|||.+..+ .++.++|+|||||++||+|+ |..|+.......
T Consensus 305 DFGLs~~~~~~------~~~~~~~klPirWLAPEtl~~~------~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~ 372 (474)
T KOG0194|consen 305 DFGLSRAGSQY------VMKKFLKKLPIRWLAPETLNTG------IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK 372 (474)
T ss_pred ccccccCCcce------eeccccccCcceecChhhhccC------ccccccchhheeeeEEeeeccCCCCCCCCCHHHHH
Confidence 99997654311 0001011345699999999874 67889999999999999999 566665332111
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....|..+...+.+|+..+|..|+++.++.+.
T Consensus 373 ~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 373 AKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred HHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 12345667788899999999999999887653
No 370
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.94 E-value=7.8e-28 Score=253.38 Aligned_cols=235 Identities=20% Similarity=0.237 Sum_probs=187.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--CCC----eeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--HPN----ILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr--HPn----Ilk~~d~~e 89 (778)
...+|+|.+.+|+|. | .|-++.++.++..||||++.. -+...+.++-|+++|.+|. -|+ ++.+.++|+
T Consensus 87 l~~Ry~i~~~lGeGtFG--kV~ec~D~~~~~~vAlKIik~---V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFG--KVVECWDRETKEHVALKIIKN---VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred cccceehhhhhcCCccc--ceEEEeecCCCceehHHHHHH---HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 356899999999999 9 899999999999999999863 3456778899999999994 333 777778887
Q ss_pred ecccccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC----
Q 004025 90 VENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---- 164 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---- 164 (778)
-. .+++||+|.++ ++.++|++++...... ..|+.+.+||+++++||| +.+++|-||||+||++..
T Consensus 162 yr--------ghiCivfellG~S~~dFlk~N~y~~fpi-~~ir~m~~QL~~sv~fLh-~~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 162 YR--------GHICIVFELLGLSTFDFLKENNYIPFPI-DHIRHMGYQLLESVAFLH-DLKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred cc--------CceEEEEeccChhHHHHhccCCccccch-HHHHHHHHHHHHHHHHHH-hcceeecCCChheEEEeccceE
Confidence 63 49999999998 7999999877655443 347788999999999999 599999999999998832
Q ss_pred ----------------CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHH
Q 004025 165 ----------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (778)
Q Consensus 165 ----------------~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG 228 (778)
+-.+||+|||-++..... ++.-+.+..|+|||++.+ -+.++.+|+||+|
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---------hs~iVsTRHYRAPEViLg------LGwS~pCDvWSiG 296 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---------HSTIVSTRHYRAPEVILG------LGWSQPCDVWSIG 296 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccC---------cceeeeccccCCchheec------cCcCCccCceeee
Confidence 235899999998876542 122234569999999998 4667899999999
Q ss_pred HHHHHHHhCCCCCChhh----hh--c--cCCC------------------------------------C-----------
Q 004025 229 CLIYELFSGMRLSKTEE----LR--N--TASI------------------------------------P----------- 253 (778)
Q Consensus 229 ~liyel~tg~~p~~~~~----l~--~--~~~i------------------------------------P----------- 253 (778)
|+|+|+++|..+|.+.+ +. + ++.+ |
T Consensus 297 CIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d 376 (415)
T KOG0671|consen 297 CILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDD 376 (415)
T ss_pred eEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCc
Confidence 99999999988875432 10 0 0001 1
Q ss_pred ---cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 254 ---KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 254 ---~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..|.+++++||..||.+|+++.++|.|+
T Consensus 377 ~e~~~LfDLl~~mL~fDP~~RiTl~EAL~Hp 407 (415)
T KOG0671|consen 377 LEHVQLFDLLRRMLEFDPARRITLREALSHP 407 (415)
T ss_pred HHHhHHHHHHHHHHccCccccccHHHHhcCH
Confidence 1377889999999999999999999998
No 371
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94 E-value=1.6e-26 Score=275.51 Aligned_cols=145 Identities=14% Similarity=0.239 Sum_probs=123.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|.+.++||.|. | +||.|.++.+++.|+||++..... .......+.+|+..++.++||||+++++++...
T Consensus 4 ~~y~i~~~LG~G~fg--~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 76 (669)
T cd05610 4 EEFVIVKPISRGAFG--KVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA----- 76 (669)
T ss_pred CCEEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC-----
Confidence 4699999999998 8 999999999999999999976432 234456788999999999999999999998764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||+ ++|..++...+.. ....+..++.||+.||.|||. ++|+||||||+||||+.+|.+||+|||
T Consensus 77 ---~~~~lVmEy~~g~~L~~li~~~~~l---~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 77 ---NNVYLVMEYLIGGDVKSLLHIYGYF---DEEMAVKYISEVALALDYLHR-HGIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred ---CEEEEEEeCCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 4899999999 4799988765432 234456679999999999996 899999999999999999999999999
Q ss_pred ccc
Q 004025 175 VLS 177 (778)
Q Consensus 175 la~ 177 (778)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 875
No 372
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.94 E-value=3.5e-27 Score=264.83 Aligned_cols=208 Identities=17% Similarity=0.245 Sum_probs=165.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...+...+.+|.|+ | .||+|+++.+|+.||||.+..... ....+...+|+++||+|+|||||+++++-++... +
T Consensus 12 ~y~W~~~e~LG~Ga~g--~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~--~ 86 (732)
T KOG4250|consen 12 NYLWEMDERLGKGAFG--NVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFL--G 86 (732)
T ss_pred CcceeehhhhcCCccc--eeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCcccc--C
Confidence 34567778999998 8 899999999999999999987432 2346678899999999999999999998776431 1
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc--CCCc--EEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT--QTLD--WKL 170 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~--~~g~--~KL 170 (778)
.....-.+||||| ++|...|.+-.......+..+.-.+..|+.||+||| +++|+||||||.||++- ++|. .||
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr-En~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR-ENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCcEEEeecCCCceEEee
Confidence 1123668999999 689999986443333344456666999999999999 59999999999999885 3343 899
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
+|||+++.+.++.. -....++..|.+||+.... ..++..+|.|||||++|++.+|..||..
T Consensus 166 tDfG~Arel~d~s~-------~~S~vGT~~YLhPel~E~q-----~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 166 TDFGAARELDDNSL-------FTSLVGTEEYLHPELYERQ-----KKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ecccccccCCCCCe-------eeeecCchhhcChHHHhhc-----cCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 99999999987531 1223556699999998742 5788899999999999999999988753
No 373
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-26 Score=274.86 Aligned_cols=239 Identities=16% Similarity=0.198 Sum_probs=190.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCc-----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSP-----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~-----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
..-++++.||.|. | .||.|....-... |+||.+.+. .+.+....+.+|..+|+.++|||||++++++.+.
T Consensus 692 ~~v~l~~~lG~G~FG--~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFG--EVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS- 767 (1025)
T ss_pred hheEeeeeecccccc--ceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC-
Confidence 3456677899998 9 9999998755443 899988754 3445677899999999999999999999999873
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCC----CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEG----SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~----~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
...+|++||+ ++|..+|++..... .....-+..+..||++|++||++ .++|||||...|+++++..
T Consensus 768 -------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~-~~fvHRDLAaRNCLL~~~r 839 (1025)
T KOG1095|consen 768 -------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES-KHFVHRDLAARNCLLDERR 839 (1025)
T ss_pred -------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh-CCCcCcchhhhheeecccC
Confidence 2689999999 68999999863211 11222355668999999999995 9999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccc--cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYA--WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT 243 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~--~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~ 243 (778)
.+|++|||+++.+.... ++... ...+.+|||||.+.. ..++.++|+||||+||||+|+ |..||..
T Consensus 840 ~VKIaDFGlArDiy~~~------yyr~~~~a~lPvkWm~PEsl~d------~iFtskSDvWsFGVllWEifslG~~PY~~ 907 (1025)
T KOG1095|consen 840 VVKIADFGLARDIYDKD------YYRKHGEAMLPVKWMPPESLKD------GIFTSKSDVWSFGVLLWEIFSLGATPYPS 907 (1025)
T ss_pred cEEEcccchhHhhhhch------heeccCccccceecCCHHHHhh------cccccccchhhhHHHHHHHHhCCCCCCCC
Confidence 99999999999665432 22221 234459999999986 367889999999999999999 4566642
Q ss_pred h-------------hhhccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 244 E-------------ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 244 ~-------------~l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .+.....+|..+.+++..||+.+|..||++..++++.
T Consensus 908 ~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 908 RSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred cchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 1 2334467899999999999999999999999998754
No 374
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=8e-27 Score=272.02 Aligned_cols=276 Identities=11% Similarity=0.111 Sum_probs=177.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...+|++.+.||.|+ | +||+|+++.+ +..|+||.+...... +...++ .++...+.++..++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG--~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFG--VVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCe--EEEEEEEcCCccccCcEEEEEEecccchh----HHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 345799999999998 8 9999999988 999999997643221 111111 22333333444433332211
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCC-----------------CcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-----------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-----------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
.. ......+|||+||+ ++|.+++....... ......+..++.||+.||.|||+ .+|+|
T Consensus 202 ~~--~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiH 278 (566)
T PLN03225 202 VS--SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVH 278 (566)
T ss_pred cc--cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEe
Confidence 10 00134799999999 46888887543110 01123356679999999999995 89999
Q ss_pred cccCCCCeEEcC-CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccc----------------c
Q 004025 153 GNVCLSSVVVTQ-TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV----------------R 215 (778)
Q Consensus 153 ~dLkp~NI~v~~-~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~----------------~ 215 (778)
|||||+||+++. ++.+||+|||++..+.... .+......+++.|+|||.+....... .
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~-----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~ 353 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI-----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQ 353 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCcccccccc-----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhcc
Confidence 999999999985 6899999999998664321 11122345567899999654221100 0
Q ss_pred CCCCCcchhHHHHHHHHHHHhCCCCCChhhh------hcc------------CCCC--------------cchHHHHHHH
Q 004025 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RNT------------ASIP--------------KSLLPDYQRL 263 (778)
Q Consensus 216 ~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------~~~------------~~iP--------------~~L~~~i~~l 263 (778)
..++.++|||||||++|||+++..+++.+.. ... ...+ ....+++++|
T Consensus 354 ~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m 433 (566)
T PLN03225 354 LNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSM 433 (566)
T ss_pred ccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence 1344567999999999999987654432210 000 0011 1123789999
Q ss_pred hccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcccCChhhHhHh
Q 004025 264 LSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTF 316 (778)
Q Consensus 264 L~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~~k~~~EK~~F 316 (778)
|..||.+||++.++|+|+ ||++.....+..++.+......+..+.
T Consensus 434 L~~dP~kR~ta~e~L~Hp--------ff~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (566)
T PLN03225 434 MRFKGRQRISAKAALAHP--------YFDREGLLGLSVMQNLRLQLFRATQQD 478 (566)
T ss_pred ccCCcccCCCHHHHhCCc--------CcCCCCccccccccccccccchhhHHH
Confidence 999999999999999998 666544444444454444444443333
No 375
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-27 Score=244.17 Aligned_cols=241 Identities=20% Similarity=0.274 Sum_probs=190.6
Q ss_pred CCCceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 18 DLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..+|.-...++.|.. .|..+.+.-.+++|+||+......+....+.+.+|++.++.+.|+||++.+.+|.-.... .
T Consensus 16 ~~Ry~nL~p~~~g~~--~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l--~ 91 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ--IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL--E 91 (369)
T ss_pred eeeeeeecccCCCCc--eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccH--H
Confidence 356777788888775 577788888899999999988766666778899999999999999999999998532110 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.-..+|+|||++ .+|...+.-.. --+.++++++|++.|++|||+ .+|+||||||+||+|+.++.+|+.|||++
T Consensus 92 ~~~e~y~v~e~m~~nl~~vi~~el-----DH~tis~i~yq~~~~ik~lhs-~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 92 EFQEVYLVMELMDANLCQVILMEL-----DHETISYILYQMLCGIKHLHS-AGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHhHHHHHHhhhhHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHh-cceeecccCcccceecchhheeeccchhh
Confidence 134789999999 67888776221 134477789999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------- 245 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----------- 245 (778)
+.-... +....+++...|.+||++.+ ..+...+||||+||++.||++|..+|.+..
T Consensus 166 r~e~~~-------~~mtpyVvtRyyrapevil~------~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~ 232 (369)
T KOG0665|consen 166 RTEDTD-------FMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ 232 (369)
T ss_pred cccCcc-------cccCchhheeeccCchheec------cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence 876542 23344567778999999988 458889999999999999999987764321
Q ss_pred -----------hhcc-----------------CCCCc---------------chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -----------LRNT-----------------ASIPK---------------SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -----------l~~~-----------------~~iP~---------------~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+..+ ..+|. .+++++.+||..||.+|.|++++|+||
T Consensus 233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 0000 01222 246678999999999999999999999
No 376
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-27 Score=268.83 Aligned_cols=233 Identities=20% Similarity=0.311 Sum_probs=177.3
Q ss_pred eeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCcc
Q 004025 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 22 ~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~~ 99 (778)
.-.+.+|.|. |. .||+|.. .|+.||||.+-. .....+.+||..|+.-+ |||||+|+..-.+ +
T Consensus 512 ~~~eilG~Gs~Gt-~Vf~G~y--e~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d--------~ 575 (903)
T KOG1027|consen 512 SPKEILGYGSNGT-VVFRGVY--EGREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQD--------R 575 (903)
T ss_pred ccHHHcccCCCCc-EEEEEee--CCceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccC--------C
Confidence 3345567777 54 7999998 589999998763 35668999999999985 9999999987544 4
Q ss_pred cEEEEEecCC-cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---C--CcEEEEe
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---T--LDWKLHA 172 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~--g~~KL~d 172 (778)
..+||+.|.| .+|.++++.... ............+.|+++||++||+ ++||||||||+||+|+. + ...+|+|
T Consensus 576 qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 576 QFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred ceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCCCcceeEEecc
Confidence 5999999999 589999987411 1111111123349999999999996 99999999999999985 3 4689999
Q ss_pred cccccccCCCCCCCCCCcc-ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC-CCCCChhhhhc--
Q 004025 173 FDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEELRN-- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~~~l~~-- 248 (778)
||+|..+..... .+. .....++..|+|||++... ....++|||||||++|++++| ..||...--++
T Consensus 655 fglsKkl~~~~s----S~~r~s~~sGt~GW~APE~L~~~------~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N 724 (903)
T KOG1027|consen 655 FGLSKKLAGGKS----SFSRLSGGSGTSGWQAPEQLRED------RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN 724 (903)
T ss_pred cccccccCCCcc----hhhcccCCCCcccccCHHHHhcc------ccCcccchhhcCceEEEEecCCccCCCchHHhhhh
Confidence 999999876432 121 2233445699999999874 445699999999999999997 57786543221
Q ss_pred ----------cCCCCc-chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPK-SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~-~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+...+. ...+++.+|++.+|..||++.++|.||
T Consensus 725 Il~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 725 ILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred hhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 112221 457889999999999999999999999
No 377
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-27 Score=253.34 Aligned_cols=241 Identities=16% Similarity=0.223 Sum_probs=197.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+....|..-+.+|.|+ | .||-++.+.+|+.+|+|.++++.... .-...+.||-.+|.++..|.||.+-..||+
T Consensus 182 vt~n~F~~~RvlGkGGFG--EV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT--- 256 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFG--EVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET--- 256 (591)
T ss_pred ccccceeeeEEEeccccc--ceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC---
Confidence 4455677778899998 8 99999999999999999999865443 335568899999999999999999999997
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
+..+++|+..+ ++|.-+|.+.+..+....+ ...+..+|+.||.+||+ .+||+|||||+||++++.|+++|+
T Consensus 257 -----kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~r-a~FYAAEi~cGLehlH~-~~iVYRDLKPeNILLDd~GhvRIS 329 (591)
T KOG0986|consen 257 -----KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQR-ARFYAAEIICGLEHLHR-RRIVYRDLKPENILLDDHGHVRIS 329 (591)
T ss_pred -----CCceEEEEEeecCCceeEEeeccCCCCCchHH-HHHHHHHHHhhHHHHHh-cceeeccCChhheeeccCCCeEee
Confidence 45899999999 6898888877654443333 45669999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-------
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE------- 244 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~------- 244 (778)
|+|++..+.... ++ ...+++..|||||++.++ .|+.+.|+|||||+||||+.|+.||...
T Consensus 330 DLGLAvei~~g~-----~~--~~rvGT~GYMAPEvl~ne------~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~e 396 (591)
T KOG0986|consen 330 DLGLAVEIPEGK-----PI--RGRVGTVGYMAPEVLQNE------VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKRE 396 (591)
T ss_pred ccceEEecCCCC-----cc--ccccCcccccCHHHHcCC------cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHH
Confidence 999999987632 21 122566799999999884 5899999999999999999999998532
Q ss_pred hhhc---------cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 245 ELRN---------TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 245 ~l~~---------~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
.+.. ..++++....+++.||..||.+|+.. +++.+||
T Consensus 397 Evdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hp 447 (591)
T KOG0986|consen 397 EVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHP 447 (591)
T ss_pred HHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCc
Confidence 1111 14566677888899999999999864 6888887
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7e-27 Score=260.62 Aligned_cols=228 Identities=19% Similarity=0.233 Sum_probs=180.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
-..|++...+|.|+ + .+..+.++.+++..++|++.+...+ ..+|+.++... .||||+++++.++.
T Consensus 321 ~~~y~~~~~~~~gs~s--~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~----- 387 (612)
T KOG0603|consen 321 TESYEFREELGEGSFS--AVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYED----- 387 (612)
T ss_pred chhhccccccCCCCcc--ceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecC-----
Confidence 34699999999987 7 7899999999999999999976222 33556444444 69999999999987
Q ss_pred CCcccEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE-cCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV-TQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v-~~~g~~KL~d 172 (778)
..++|+|||.+ + -|.+.+....... . ....++.||+.|+.|||. .++|||||||+||++ +..|.++|+|
T Consensus 388 ---~~~~~~v~e~l~g~ell~ri~~~~~~~---~-e~~~w~~~lv~Av~~LH~-~gvvhRDLkp~NIL~~~~~g~lrlty 459 (612)
T KOG0603|consen 388 ---GKEIYLVMELLDGGELLRRIRSKPEFC---S-EASQWAAELVSAVDYLHE-QGVVHRDLKPGNILLDGSAGHLRLTY 459 (612)
T ss_pred ---CceeeeeehhccccHHHHHHHhcchhH---H-HHHHHHHHHHHHHHHHHh-cCeeecCCChhheeecCCCCcEEEEE
Confidence 45999999999 3 3555554443222 1 233349999999999996 999999999999999 6999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~ 248 (778)
||+++..... .. .-..+..|.|||+... ..++.++|+||||+++|+|++|..||... ++..
T Consensus 460 FG~a~~~~~~---~~------tp~~t~~y~APEvl~~------~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~ 524 (612)
T KOG0603|consen 460 FGFWSELERS---CD------TPALTLQYVAPEVLAI------QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT 524 (612)
T ss_pred echhhhCchh---hc------ccchhhcccChhhhcc------CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH
Confidence 9999987653 00 1133458999999885 58999999999999999999999988542 2222
Q ss_pred c-------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T-------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~-------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++....++++.||+.+|.+|+++.++..|+
T Consensus 525 ~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 525 RIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred hhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 1 34667788999999999999999999999998
No 379
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.94 E-value=6.7e-26 Score=232.81 Aligned_cols=221 Identities=20% Similarity=0.323 Sum_probs=178.5
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cCh
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPL 112 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L 112 (778)
.||+|+.+.+|+.|++|++........ .+.+.+|++.++.++||||+++++.+... ...|+++|++ ++|
T Consensus 4 ~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~~~~l~~e~~~~~~L 74 (244)
T smart00220 4 KVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDE--------DKLYLVMEYCDGGDL 74 (244)
T ss_pred EEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeC--------CEEEEEEeCCCCCCH
Confidence 899999999999999999986543322 56889999999999999999999999864 3899999999 379
Q ss_pred HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccc
Q 004025 113 SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192 (778)
Q Consensus 113 ~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~ 192 (778)
..++..... .....+..++.|++.+|.|||+ .+++|+||+|.||+++.+|.++|+|||++........ .
T Consensus 75 ~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~-------~ 143 (244)
T smart00220 75 FDLLKKRGR---LSEDEARFYARQILSALEYLHS-NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL-------L 143 (244)
T ss_pred HHHHHhccC---CCHHHHHHHHHHHHHHHHHHHH-cCeecCCcCHHHeEECCCCcEEEccccceeeeccccc-------c
Confidence 988876542 2334456669999999999995 8999999999999999999999999999887755311 1
Q ss_pred cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-hhhhc--------cC-------CCCcch
Q 004025 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELRN--------TA-------SIPKSL 256 (778)
Q Consensus 193 ~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-~~l~~--------~~-------~iP~~L 256 (778)
........|++||...+ ...+.++|+|+||+++|++++|..++.. ..... .. .+|..+
T Consensus 144 ~~~~~~~~~~~pE~~~~------~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (244)
T smart00220 144 TTFVGTPEYMAPEVLLG------KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEA 217 (244)
T ss_pred ccccCCcCCCCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHH
Confidence 11223447999999874 3456699999999999999999888754 21110 00 177888
Q ss_pred HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 257 LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 257 ~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+++.+|+..+|..||++.++++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~~~ 242 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQHP 242 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhhCC
Confidence 9999999999999999999999987
No 380
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=1.1e-26 Score=229.21 Aligned_cols=232 Identities=17% Similarity=0.244 Sum_probs=182.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~ 94 (778)
.+.+|+|.+++|.|- + .||.|.+..+++.|.||+++. ...+.+++|+++|..|+ ||||++++|...+..
T Consensus 36 ~~ddYeivrk~GRGKYS--EVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~-- 106 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYS--EVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE-- 106 (338)
T ss_pred ccchHHHHHHHcCccHh--hHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc--
Confidence 567899999999997 7 899999999999999999863 23567999999999999 999999999998755
Q ss_pred cCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCcEEEE
Q 004025 95 ATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~~KL~ 171 (778)
.....+|+||+. +...+..... .--|.+.++|+++||.|||+ .||+|||+||.||+|+ +.-.++|+
T Consensus 107 ----SktpaLiFE~v~n~Dfk~ly~tl~------d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~~rkLrlI 175 (338)
T KOG0668|consen 107 ----SKTPSLIFEYVNNTDFKQLYPTLT------DYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHELRKLRLI 175 (338)
T ss_pred ----ccCchhHhhhhccccHHHHhhhhc------hhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechhhceeeee
Confidence 346789999994 4444333321 12267779999999999996 9999999999999999 45679999
Q ss_pred ecccccccCCCCCCCCCCcccccccc-CCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC-C----hhh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLV-GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-K----TEE 245 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~-~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~-~----~~~ 245 (778)
|+|++....... .|+-.+ ...|.-||++..- +.+.++.|+|||||++..|+..+.|| . .+|
T Consensus 176 DWGLAEFYHp~~--------eYnVRVASRyfKGPELLVdy-----~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQ 242 (338)
T KOG0668|consen 176 DWGLAEFYHPGK--------EYNVRVASRYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 242 (338)
T ss_pred ecchHhhcCCCc--------eeeeeeehhhcCCchheeec-----hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHH
Confidence 999998876532 222222 3356889998763 56889999999999999999887665 1 122
Q ss_pred hhcc---------------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 LRNT---------------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l~~~---------------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+-.+ .-..++..+++.++|..|-..|+++.+.+.|
T Consensus 243 LVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 243 LVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 2110 0123456788999999999999999999999
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 323 p 323 (338)
T KOG0668|consen 323 P 323 (338)
T ss_pred c
Confidence 8
No 381
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-25 Score=256.56 Aligned_cols=250 Identities=18% Similarity=0.239 Sum_probs=200.4
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+.+.--|+|.+.+|.|. | .||+++.+.+++.++||+.+..... -+.+.-|.++|+.+. |||+..++++|.-..
T Consensus 15 pdp~d~~ei~evig~Gtyg--kv~k~k~~~~~~~aa~kI~~~~~d~---deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYG--KVYKGRHVKTGQLAAIKIMDPTEDE---EEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred CCCCCccEEEEEEeeccce--eEEEEeeeecCceeeeEeecCCccc---cHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 34566799999999998 7 8999999999999999998864433 345667888898885 999999999987543
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+ +..+++||||| |+..++++... .....+++|+++++.++.||.+||+ ..++|||||-.||+++.+|.+||
T Consensus 90 ~~~---~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~-nkviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 90 PGN---GDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN-NKVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred CCC---CCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh-cceeeecccCceEEEeccCcEEE
Confidence 222 56999999999 57888888765 4556677899999999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC-hhhhhcc
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK-TEELRNT 249 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~-~~~l~~~ 249 (778)
+|||++..++..- -.+..+++++.|||||++... ......++..+|+||||++-.||--|.+|+. ....+-+
T Consensus 165 vDFGvSaQldsT~------grRnT~iGtP~WMAPEViac~-e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL 237 (953)
T KOG0587|consen 165 VDFGVSAQLDSTV------GRRNTFIGTPYWMAPEVIACD-ESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL 237 (953)
T ss_pred eeeeeeeeeeccc------ccccCcCCCcccccceeeecc-cCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh
Confidence 9999988876521 123344666789999998753 2223467789999999999999999988754 3334434
Q ss_pred CCCC--------------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ASIP--------------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ~~iP--------------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..|| +.+.+.+..||.+|-.+||+..++++|+
T Consensus 238 F~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 238 FLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred ccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 3333 2355678899999999999999999998
No 382
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=239.87 Aligned_cols=235 Identities=18% Similarity=0.198 Sum_probs=178.2
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHH-HhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKR-LRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~-Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
..||.|. | +|++..+|.+|+..|||.+...+... ...+++.|+.. ++.-+.|||++|++.+..|. ..
T Consensus 70 g~iG~G~fG--~V~KM~hk~sg~~mAVKrIr~~n~~k-eq~rll~e~d~~mks~~cp~IVkfyGa~F~EG--------dc 138 (361)
T KOG1006|consen 70 GEIGNGAFG--TVNKMLHKPSGKLMAVKRIRSNNIEK-EQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG--------DC 138 (361)
T ss_pred HHhcCCcch--hhhhhhcCccCcEEEEEEeeeccchH-HHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC--------ce
Confidence 4577777 8 99999999999999999998765533 33455666654 55557999999999998753 68
Q ss_pred EEEecCC-cChHHHHHHh-CcCCC-cchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 103 YIVTEPV-MPLSEKIKEL-GLEGS-QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 103 yIVtE~v-~~L~~~L~~~-~~~~~-~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+|.||.+ .+|..+.+.- ..... ..+.++..+.--.+.||.||....+|+||||||+||+++..|.+||||||++..+
T Consensus 139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 9999999 5655444321 11111 2233444456677899999998889999999999999999999999999999887
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-----hhhhcc-----
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-----EELRNT----- 249 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-----~~l~~~----- 249 (778)
.+. +....-.+-..|||||.+...- .+|...+|+||||+.|||+.+|..|+.. +++.++
T Consensus 219 v~S-------iAkT~daGCrpYmAPERi~p~~----~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp 287 (361)
T KOG1006|consen 219 VDS-------IAKTVDAGCRPYMAPERIDPSD----KGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP 287 (361)
T ss_pred HHH-------HHhhhccCCccccChhccCCcc----CCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC
Confidence 652 2122223334899999987641 3688899999999999999999988753 233221
Q ss_pred ---------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ---------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
......+...+.-||.+|-..||...++++++
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~ 328 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFP 328 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCc
Confidence 12445677888999999999999999999987
No 383
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=244.06 Aligned_cols=250 Identities=19% Similarity=0.235 Sum_probs=194.7
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
-+..-+|.+...||.|+ | +|-.|-+|.+.+.+|||++.+... .+...+--..|-++|... +-|.+++++.+|.+-
T Consensus 345 ~i~~tDFnFl~VlGKGSFG--KVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFG--KVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ceeecccceEEEeccCccc--eeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 45556788999999999 9 999999999999999999987532 122344556676777665 577888888888873
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+|+||||| ++|--+|++.+...... ...+...|+-||-|||+ .+|++||||.+||+++.+|.+|
T Consensus 423 --------DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~---AvFYAaEiaigLFFLh~-kgIiYRDLKLDNvmLd~eGHiK 490 (683)
T KOG0696|consen 423 --------DRLYFVMEYVNGGDLMYHIQQVGKFKEPV---AVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGHIK 490 (683)
T ss_pred --------hheeeEEEEecCchhhhHHHHhcccCCch---hhhhhHHHHHHhhhhhc-CCeeeeeccccceEeccCCceE
Confidence 4899999999 68998998876533222 22348899999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN- 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~- 248 (778)
|.|||++..---. ......+++++.|+|||++.. +.|..++|+|++|+|+|||+.|++||+.++-..
T Consensus 491 i~DFGmcKEni~~------~~TTkTFCGTPdYiAPEIi~Y------qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el 558 (683)
T KOG0696|consen 491 IADFGMCKENIFD------GVTTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL 558 (683)
T ss_pred eeecccccccccC------CcceeeecCCCcccccceEEe------cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 9999999754321 223445678889999999986 578899999999999999999999998754322
Q ss_pred -------cCCCCcch----HHHHHHHhccCCCCCCCh-----HHHHhcccCCccccccccchhhhh
Q 004025 249 -------TASIPKSL----LPDYQRLLSSMPSRRLNS-----SKLIENSVGDFWMTEYFQNKLVDT 298 (778)
Q Consensus 249 -------~~~iP~~L----~~~i~~lL~~dP~~Rps~-----~~lL~~~~~~~w~~~ff~n~lv~~ 298 (778)
....|++| ...++.+|...|.+|+.. .++-.|+ ||++.-.+.
T Consensus 559 F~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~--------FFR~iDWek 616 (683)
T KOG0696|consen 559 FQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHP--------FFRRIDWEK 616 (683)
T ss_pred HHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCc--------chhhccHHH
Confidence 23455554 566788999999999875 3566665 777654433
No 384
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.1e-26 Score=249.93 Aligned_cols=234 Identities=16% Similarity=0.250 Sum_probs=188.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
.+...++|.|. | .||.|.+|.-.-.|+||.++. +...++.+..|..+||.|+|||+++++++|..+-
T Consensus 269 ItMkhKLGGGQYG--eVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep------- 336 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP------- 336 (1157)
T ss_pred eeeeeccCCCccc--ceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-------
Confidence 34456788887 8 999999999999999999863 2345778899999999999999999999998753
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
-+||||||+ +.|.+||++.+..... ...+.++..||..|+.||. ..++|||||-..|.+|.++..+|++|||+++
T Consensus 337 -PFYIiTEfM~yGNLLdYLRecnr~ev~-avvLlyMAtQIsSaMeYLE-kknFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 337 -PFYIITEFMCYGNLLDYLRECNRSEVP-AVVLLYMATQISSAMEYLE-KKNFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred -CeEEEEecccCccHHHHHHHhchhhcc-hhHHHHHHHHHHHHHHHHH-HhhhhhhhhhhhhccccccceEEeeccchhh
Confidence 699999998 7899999998754432 3346677899999999999 4899999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc--------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN-------- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~-------- 248 (778)
.+..+.... +-....+..|.+||-+... ..+.++|+|+||+|+||+.+ |..|+..-++.+
T Consensus 414 lMtgDTYTA-----HAGAKFPIKWTAPEsLAyN------tFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg 482 (1157)
T KOG4278|consen 414 LMTGDTYTA-----HAGAKFPIKWTAPESLAYN------TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG 482 (1157)
T ss_pred hhcCCceec-----ccCccCcccccCccccccc------ccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc
Confidence 987742110 1112234489999987652 56679999999999999988 445664433322
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|+.+.++++.||+.+|..||++.++-+.
T Consensus 483 yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqa 519 (1157)
T KOG4278|consen 483 YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQA 519 (1157)
T ss_pred ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHH
Confidence 24689999999999999999999999987553
No 385
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-27 Score=240.30 Aligned_cols=244 Identities=18% Similarity=0.261 Sum_probs=183.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+-+-.+.||.|. | .||..++..+|+.|++|++..-..+-...+.+-+|++.|...+|.|++..+|.+...+.+.
T Consensus 53 ~Di~PDRPIGYGAFG--VVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~df-- 128 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFG--VVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSF-- 128 (449)
T ss_pred ccCCCCCccccccee--EEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchH--
Confidence 3445567899998 8 8999999999999999998743333234566778999999999999999999887543221
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
-..+|++||.+. +|...|-.-.. ...+-++-.+|||++||+|||+ ++|.||||||.|.+|+.+..+||||||++
T Consensus 129 -FqEiYV~TELmQSDLHKIIVSPQ~---Ls~DHvKVFlYQILRGLKYLHs-A~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 129 -FQELYVLTELMQSDLHKIIVSPQA---LTPDHVKVFVYQILRGLKYLHT-ANILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred -HHHHHHHHHHHHhhhhheeccCCC---CCcchhhhhHHHHHhhhHHHhh-cchhhccCCCccEEeccCceEEecccccc
Confidence 236899999984 68776654322 2233466669999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhh-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELR----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~----- 247 (778)
+..+.+.. .....-+++..|++||++.+. ..|+.++|+||.||++.|++..+.+|... ++.
T Consensus 204 Rvee~d~~-----~hMTqEVVTQYYRAPEiLMGa-----RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdL 273 (449)
T KOG0664|consen 204 RTWDQRDR-----LNMTHEVVTQYYRAPELLMGA-----RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDL 273 (449)
T ss_pred cccchhhh-----hhhHHHHHHHHhccHHHhhcc-----hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHH
Confidence 87655321 111222455589999999986 68899999999999999999988777431 110
Q ss_pred ----------------------c---------cCCCCc------chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------N---------TASIPK------SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------~---------~~~iP~------~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ++.+.. ....++..++..+|..|.+.++.+.|.
T Consensus 274 LGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 274 LGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0 011111 123456788999999999999998886
No 386
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-25 Score=246.40 Aligned_cols=236 Identities=14% Similarity=0.178 Sum_probs=185.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
....|+++||+|. | .|+.|.-- .+..||||++...... .....+.+|+++|.+|+||||+.+++++..++
T Consensus 538 s~L~~~ekiGeGqFG--EVhLCeve-g~lkVAVK~Lr~~a~~-~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De----- 608 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFG--EVHLCEVE-GPLKVAVKILRPDATK-NARNDFLKEIKILSRLKHPNIVELLGVCVQDD----- 608 (807)
T ss_pred hheehhhhhcCcccc--eeEEEEec-CceEEEEeecCcccch-hHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----
Confidence 3477889999999 8 89998854 3689999999754333 33567899999999999999999999998754
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
-+++||||+ ++|.+++........... ....++.||+.||+||.+ +++|||||.+.|++|+.++.+||+|||+
T Consensus 609 ---PicmI~EYmEnGDLnqFl~aheapt~~t~-~~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv~~e~~iKiadfgm 683 (807)
T KOG1094|consen 609 ---PLCMITEYMENGDLNQFLSAHELPTAETA-PGVSICTQIASGMAYLES-LNFVHRDLATRNCLVDGEFTIKIADFGM 683 (807)
T ss_pred ---chHHHHHHHhcCcHHHHHHhccCcccccc-hhHHHHHHHHHHHHHHHh-hchhhccccccceeecCcccEEecCccc
Confidence 799999999 789999988744331222 223469999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccc--ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh--CCCCCCh---hhh-h
Q 004025 176 LSEFDGNNEAANGPMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS--GMRLSKT---EEL-R 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t--g~~p~~~---~~l-~ 247 (778)
++.+-.. ++++. ..+.+.+|||+|.+.-+ ..+.++|+|+||+.+||+|+ ...||.. ++. .
T Consensus 684 sR~lysg------~yy~vqgr~vlpiRwmawEsillg------kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve 751 (807)
T KOG1094|consen 684 SRNLYSG------DYYRVQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE 751 (807)
T ss_pred ccccccC------CceeeecceeeeeeehhHHHHHhc------cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH
Confidence 9977542 22222 23445699999998763 67889999999999999886 3445431 111 1
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...-+|..+.+++-+|++.+-++||+++++..+
T Consensus 752 n~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 752 NAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred hhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 113467889999999999999999999987543
No 387
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=253.40 Aligned_cols=237 Identities=16% Similarity=0.212 Sum_probs=189.7
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-.|.+.||.|. | .||+|+.|..| ..||||.++.. ..+.....+..|..+|-+..||||+++.++....
T Consensus 631 i~Ie~VIGaGEFG--EVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks----- 702 (996)
T KOG0196|consen 631 VKIEKVIGAGEFG--EVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS----- 702 (996)
T ss_pred eEEEEEEeccccc--ceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC-----
Confidence 45677889888 9 99999999777 47999999754 3445667789999999999999999999998753
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
+-+.|||||+ ++|..+|+.+.- ......+.-+++.|+.|++||- +.++|||||-..||+||.+-..|+.|||
T Consensus 703 ---~PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLs-dm~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 703 ---KPVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLS-DMNYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred ---ceeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHh-hcCchhhhhhhhheeeccceEEEecccc
Confidence 4799999999 689999998762 2233345566999999999999 5999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC-Ch---hhhhc-
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS-KT---EELRN- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~-~~---~~l~~- 248 (778)
+++.+.++.+ ..+.......+.+|.|||.+.. ...+.++|+||+|++|||+++ |..|+ +- +-++.
T Consensus 777 LSRvledd~~---~~ytt~GGKIPiRWTAPEAIa~------RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI 847 (996)
T KOG0196|consen 777 LSRVLEDDPE---AAYTTLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 847 (996)
T ss_pred ceeecccCCC---ccccccCCccceeecChhHhhh------cccCchhhccccceEEEEecccCCCcccccchHHHHHHH
Confidence 9998876531 1222223344459999999876 467889999999999999987 55454 32 11211
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|..|.+++..|++++-..||.+.+++..
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 23567789999999999999999999998765
No 388
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.7e-24 Score=232.00 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=116.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----CC---CeeeEeeee
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----HP---NILAFLHST 88 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-----HP---nIlk~~d~~ 88 (778)
..+|.+.++||-|- + |||.+.+..+.+.||+|+.... +.+.+.+..||++|++++ |+ +||+++|.|
T Consensus 77 ~gRY~v~rKLGWGHFS--TVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFS--TVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred CceEEEEEeccccccc--eeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 37899999999998 7 9999999999999999998742 356778999999999996 33 599999999
Q ss_pred EecccccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc
Q 004025 89 EVENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~ 163 (778)
.....+ +.++|+|+|+.+ .|..+|+.....+.. ...++.+++||+.||.|||.+|+|||-||||+||++.
T Consensus 152 khsGpN----G~HVCMVfEvLGdnLLklI~~s~YrGlp-l~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 152 KHSGPN----GQHVCMVFEVLGDNLLKLIKYSNYRGLP-LSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eecCCC----CcEEEEEehhhhhHHHHHHHHhCCCCCc-HHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 987766 479999999997 588888887665543 3457888999999999999999999999999999984
No 389
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=4.7e-25 Score=242.56 Aligned_cols=241 Identities=12% Similarity=0.197 Sum_probs=185.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
=|...+.||.|. | .|..+++.++...||+|.+.++.- ...+....+.|-.+|..-..+-||++|..|.+.
T Consensus 630 mFvkik~iGvGAFG--eV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk------ 701 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFG--EVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK------ 701 (1034)
T ss_pred ceEEEeeecccccc--eeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC------
Confidence 377788899999 9 999999999999999999987532 224566788899999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ +++-.+|-+.+..+ ++.-.++|..+..|+.+.| +.|+|||||||+||+|+.+|.+||.|||+
T Consensus 702 --dnLYFVMdYIPGGDmMSLLIrmgIFe---E~LARFYIAEltcAiesVH-kmGFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 702 --DNLYFVMDYIPGGDMMSLLIRMGIFE---EDLARFYIAELTCAIESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred --CceEEEEeccCCccHHHHHHHhccCH---HHHHHHHHHHHHHHHHHHH-hccceecccCccceEEccCCceeeeeccc
Confidence 4899999999 67887777766532 3344556999999999999 49999999999999999999999999999
Q ss_pred ccccCC--------CCCCCC-C---------------------------CccccccccCCCCCCccccccccccccCCCC
Q 004025 176 LSEFDG--------NNEAAN-G---------------------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPP 219 (778)
Q Consensus 176 a~~~~~--------~~~~~~-~---------------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~ 219 (778)
|+-+.- .++... . .+.....+++..|++||++.. .+++
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r------~g~~ 849 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR------TGYT 849 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc------cCcc
Confidence 975521 110000 0 011122345569999999876 5788
Q ss_pred CcchhHHHHHHHHHHHhCCCCCChhhh-----h-----c------cCCCCcchHHHHHHHhccCCCCCCC---hHHHHhc
Q 004025 220 WSIDSWGLGCLIYELFSGMRLSKTEEL-----R-----N------TASIPKSLLPDYQRLLSSMPSRRLN---SSKLIEN 280 (778)
Q Consensus 220 ~~~DiwSLG~liyel~tg~~p~~~~~l-----~-----~------~~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~ 280 (778)
..+|+||.|++||||+.|++||-.+.. + + ..++.++...++.+|+. .+..|+. .+++..|
T Consensus 850 q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 850 QLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAH 928 (1034)
T ss_pred ccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcC
Confidence 999999999999999999999854321 1 1 14566777888877664 3555653 4567788
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 929 p 929 (1034)
T KOG0608|consen 929 P 929 (1034)
T ss_pred c
Confidence 7
No 390
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.6e-25 Score=237.70 Aligned_cols=250 Identities=14% Similarity=0.128 Sum_probs=194.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-----hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-----~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
..+|-+...+|.|+ + .||++.+...++.||||+-..+... +...+.+.+|.++.|.|.||.|+++||+|.-+
T Consensus 462 n~RYLlLhLLGrGGFS--EVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFS--EVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred HHHHHHHHHhccccHH--HHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34688888999997 6 8999999989999999998754332 24567889999999999999999999999876
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC-CccccccCCCCeEEc---CC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-KLVHGNVCLSSVVVT---QT 165 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~-~ivH~dLkp~NI~v~---~~ 165 (778)
+ ..+|-|.||| .+|.-||+......... ...++.||+.||.||+... .|||-||||.||++- ..
T Consensus 540 t-------dsFCTVLEYceGNDLDFYLKQhklmSEKE---ARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 540 T-------DSFCTVLEYCEGNDLDFYLKQHKLMSEKE---ARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred c-------ccceeeeeecCCCchhHHHHhhhhhhHHH---HHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence 4 4799999999 36999999876543322 3445999999999999622 699999999999984 56
Q ss_pred CcEEEEecccccccCCCCCCCCCCc-cccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPM-LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE 244 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~-~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~ 244 (778)
|++||.|||++..++++.......+ +...+.++-+|.|||.+.-+.. +...+.++|+||+|+++|.++.|+.||..+
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgke--PPKIsnKVDVWSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKE--PPKISNKVDVWSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred ceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCC--CCccccceeeEeeehhhhhhhccCCCCCCc
Confidence 8999999999999987665433222 2333445558999998764321 134567999999999999999999999754
Q ss_pred hhhc-------c-----CCC------CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 245 ELRN-------T-----ASI------PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 245 ~l~~-------~-----~~i------P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+-.+ + ..+ ......++++||..--..|..+.++-.++
T Consensus 688 qsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dp 742 (775)
T KOG1151|consen 688 QSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDP 742 (775)
T ss_pred hhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCc
Confidence 3211 0 123 34567889999999999999999988876
No 391
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.5e-24 Score=232.10 Aligned_cols=240 Identities=15% Similarity=0.191 Sum_probs=173.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH--hcCCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL--RTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~L--k~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.-.+.+.||.|. | .||+|+++ |+.||||+|.... .+...+|.++. ..|||+||+.|+..=..++
T Consensus 212 qI~L~e~IGkGRyG--EVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~---- 278 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFG--EVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDN---- 278 (513)
T ss_pred eeEEEEEecCcccc--ceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCC----
Confidence 456677889998 9 99999997 9999999998532 12344444444 4579999999998766544
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC-------CccccccCCCCeEEcCCCc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-------KLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~-------~ivH~dLkp~NI~v~~~g~ 167 (778)
++-..+++||+|- |+|++||.+.... .+...+.++.++.||.|||.+- .|.|||||..||+|..+|.
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r~tv~----~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNRNTVT----TEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhhccCC----HHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 2357899999998 7999999986542 3334566999999999999532 4999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC----------
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---------- 237 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg---------- 237 (778)
.-|+|+|++-......... .+.....+++.+|||||++....+.---..-..+||||||.++||+.-.
T Consensus 355 C~IADLGLAv~h~~~t~~i--di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTI--DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred EEEeeceeeEEecccCCcc--cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 9999999998776643221 2223334667799999998753221000111368999999999999763
Q ss_pred CCCCC--------hhhhhc-------cCCCCc---------chHHHHHHHhccCCCCCCChHHHH
Q 004025 238 MRLSK--------TEELRN-------TASIPK---------SLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 238 ~~p~~--------~~~l~~-------~~~iP~---------~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
++||. .++.+. ...||. .+..+++.|+..||..|.++-.+-
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 13331 122222 234553 255678899999999999886553
No 392
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.92 E-value=4.5e-25 Score=245.33 Aligned_cols=238 Identities=15% Similarity=0.178 Sum_probs=186.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+.++||.|. | .|++|.++..+ -.||||++....... ....+.+|+..|.+|+|||+|++|+++-+
T Consensus 111 ~i~l~e~LG~GsFg--vV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~----- 182 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFG--VVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD----- 182 (1039)
T ss_pred HHHHHHHhcCccee--eEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-----
Confidence 455677889998 8 89999987544 369999987543332 56789999999999999999999999975
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.-+.+|||.+ ++|.+.|.. ..........+..++.||+.||.||.. .++|||||-..||++-....+|||||
T Consensus 183 ----qp~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes-krlvHRDLAARNlllasprtVKI~DF 256 (1039)
T KOG0199|consen 183 ----QPAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES-KRLVHRDLAARNLLLASPRTVKICDF 256 (1039)
T ss_pred ----chhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhheecccceeeeecc
Confidence 2689999998 789998887 223333344466679999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCCh----hhhhc
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKT----EELRN 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~----~~l~~ 248 (778)
|+++.+....+.. ...-...++..|.|||.++. ..++.++|+|++|+.|||||+++ .|+.. ..+++
T Consensus 257 GLmRaLg~ned~Y---vm~p~rkvPfAWCaPEsLrh------~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~ 327 (1039)
T KOG0199|consen 257 GLMRALGENEDMY---VMAPQRKVPFAWCAPESLRH------RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN 327 (1039)
T ss_pred cceeccCCCCcce---EecCCCcCcccccCHhHhcc------ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh
Confidence 9999997743211 01111233447899999987 46788999999999999999964 45421 12222
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|+.+.+++++||..+|..||++..+.+.
T Consensus 328 iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 328 IDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 24577889999999999999999999887543
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.92 E-value=6.6e-25 Score=213.97 Aligned_cols=204 Identities=14% Similarity=0.109 Sum_probs=157.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhc-CCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~-LrHPnIlk~~d~~e~e~~~g~ 96 (778)
....-++++|.|+ | .|-+-++..+|...|+|.+.....+. ....+.+|+.+..+ ..+|.++.|++.+..+.
T Consensus 46 d~L~~i~elGrGayG--~vekmrh~~sg~imAvKri~~tvn~q-~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg---- 118 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYG--VVEKMRHIQSGTIMAVKRIRATVNSQ-EQKRLLMDLDIIMRTVDCPFTVHFYGALFREG---- 118 (282)
T ss_pred hhhhhhhhhcCCccc--hhhheeeccCCeEEEEeeehhhcChH-HHHHHHHhhhhhccCCCCCeEEEeehhhhccc----
Confidence 3445567789987 8 67777888899999999998765443 34556778876554 56999999999987653
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++|.||.+ .+|..+.++--.. ....+..+-.+...|++||.|||++.+++|||+||+||+||..|.+|+||||
T Consensus 119 ----dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 119 ----DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred ----cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccc
Confidence 799999999 6777665543222 2233444566688999999999998899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
++..+.+. +...-..+-..|||||.+..+... ..|+-++|+||||+.|.||..++.|++
T Consensus 195 IsG~L~dS-------iAkt~daGCkpYmaPEri~~e~n~--~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 195 ISGYLVDS-------IAKTMDAGCKPYMAPERINPELNQ--KGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred cceeehhh-------hHHHHhcCCCccCChhhcCcccCc--ccceeehhhhhhhhhhhhhhhcccccc
Confidence 99887653 111111233489999999865332 478899999999999999999998765
No 394
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.92 E-value=5.9e-24 Score=242.84 Aligned_cols=258 Identities=13% Similarity=0.095 Sum_probs=172.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC----------------CCCCcEEEEEEeCCCCch--h----------HHHHH
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK----------------DDGSPVSIFSISGTNAQD--G----------HLAAA 66 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k----------------~~g~~VaIK~~~~~~~~~--~----------~~~~~ 66 (778)
....+|++.++||+|+ | +||+|... ..++.|+||.+....... . ..+..
T Consensus 142 ~~~d~F~i~~~LG~GgFG--~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFG--ITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred ccccCceEeeEeecCCCe--EEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 4556899999999999 9 89999752 345689999987532111 0 11223
Q ss_pred HHHHHHHhcCCCCCe-----eeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-----------------
Q 004025 67 RNGVKRLRTVRHPNI-----LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----------------- 122 (778)
Q Consensus 67 ~~ev~~Lk~LrHPnI-----lk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~----------------- 122 (778)
..|+..+.+++|.++ +++++++.....++...+...|+|+||+ ++|.++|......
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 346677777776554 6677776543322222245789999999 4688888642110
Q ss_pred ----CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccC
Q 004025 123 ----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG 198 (778)
Q Consensus 123 ----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~ 198 (778)
.......+..++.||+.+|.|||+ .+++||||||+||+++.++.+||+|||++..+.... .........+
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-----~~~~~~g~~t 373 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-----NFNPLYGMLD 373 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----ccCccccCCC
Confidence 001123355668999999999995 899999999999999999999999999987654321 1111112234
Q ss_pred CCCCCcccccccccccc----------------CCCCCcchhHHHHHHHHHHHhCCC-CCCh------h------hhh--
Q 004025 199 AQYKPVELAKSDWTAVR----------------KSPPWSIDSWGLGCLIYELFSGMR-LSKT------E------ELR-- 247 (778)
Q Consensus 199 ~~Y~aPE~~~~~~~~~~----------------~~~~~~~DiwSLG~liyel~tg~~-p~~~------~------~l~-- 247 (778)
+.|++||.+........ .......|+||+||++|+|++|.. ++.. + .+.
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~ 453 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW 453 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH
Confidence 68999998754211000 112235799999999999999863 3321 0 000
Q ss_pred -----------ccCCCCcchHHHHHHHhccCC---CCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMP---SRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP---~~Rps~~~lL~~~ 281 (778)
....++....+++.+||..+| .+|+|+.++|+|+
T Consensus 454 r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 454 RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 012345667889999999765 6899999999998
No 395
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.2e-25 Score=227.02 Aligned_cols=250 Identities=17% Similarity=0.245 Sum_probs=192.9
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
++.-.+|.+...||.|+ . +|..++.+++.+.+|+|++++.-.++ ......+.|-.+..+- +||.++-++.+|.++
T Consensus 246 ~l~l~df~ll~vigrgsya--kvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYA--KVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred ccccccceeeeeecCcchh--hhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 34456799999999986 5 89999999999999999998764332 4455666676666665 699999999999987
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
+ .+++|.||| ++|--++++..... ++....+-..|+.||.|||+ .+|++||||.+||+++..|.+|
T Consensus 324 s--------rlffvieyv~ggdlmfhmqrqrklp---eeharfys~ei~lal~flh~-rgiiyrdlkldnvlldaeghik 391 (593)
T KOG0695|consen 324 S--------RLFFVIEYVNGGDLMFHMQRQRKLP---EEHARFYSAEICLALNFLHE-RGIIYRDLKLDNVLLDAEGHIK 391 (593)
T ss_pred c--------eEEEEEEEecCcceeeehhhhhcCc---HHHhhhhhHHHHHHHHHHhh-cCeeeeeccccceEEccCCcee
Confidence 5 899999999 57776666654332 23334447899999999995 9999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh------
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT------ 243 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~------ 243 (778)
|.|+|+|+.--..++ ....+++++.|.|||++++ ..|..++|+|+||+||+||+.|+.||+-
T Consensus 392 ltdygmcke~l~~gd------~tstfcgtpnyiapeilrg------eeygfsvdwwalgvlmfemmagrspfdivgm~n~ 459 (593)
T KOG0695|consen 392 LTDYGMCKEGLGPGD------TTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP 459 (593)
T ss_pred ecccchhhcCCCCCc------ccccccCCCcccchhhhcc------cccCceehHHHHHHHHHHHHcCCCCcceecCCCc
Confidence 999999986544322 2344677889999999998 4789999999999999999999999851
Q ss_pred ----hh------hhccCCCCcch----HHHHHHHhccCCCCCCCh------HHHHhcccCCccccccccchhhhh
Q 004025 244 ----EE------LRNTASIPKSL----LPDYQRLLSSMPSRRLNS------SKLIENSVGDFWMTEYFQNKLVDT 298 (778)
Q Consensus 244 ----~~------l~~~~~iP~~L----~~~i~~lL~~dP~~Rps~------~~lL~~~~~~~w~~~ff~n~lv~~ 298 (778)
++ +.....||.++ ...++..|++||+.|+.. .++..|+ ||++.-.+.
T Consensus 460 d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~--------ffr~idwd~ 526 (593)
T KOG0695|consen 460 DMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHA--------FFRSIDWDL 526 (593)
T ss_pred ccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcch--------hhhhCCHHH
Confidence 10 12224677765 456889999999999864 4555554 666544433
No 396
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.91 E-value=2.3e-24 Score=268.25 Aligned_cols=222 Identities=19% Similarity=0.269 Sum_probs=166.3
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|...+.+|.|+ | .||+|+.+.++..|+||.+...... ...|++.+++++||||+++++++..+
T Consensus 692 ~~~~~~ig~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~-------- 755 (968)
T PLN00113 692 LKEENVISRGKKG--ASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSE-------- 755 (968)
T ss_pred CCcccEEccCCCe--eEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcC--------
Confidence 44556788888 8 9999999999999999998643221 23468899999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcC--CCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+||||+ ++|.++++... ......++.||+.||.|||.. .+++||||||+||+++.++..++. |+.
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~~l~------~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~ 828 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLRNLS------WERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSL 828 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHhcCC------HHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecc
Confidence 3789999999 57999986421 223445599999999999943 489999999999999999888875 554
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----h----
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L---- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l---- 246 (778)
....... ....++..|+|||++.+ ..++.++|||||||++|||++|+.|++... +
T Consensus 829 ~~~~~~~----------~~~~~t~~y~aPE~~~~------~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 892 (968)
T PLN00113 829 PGLLCTD----------TKCFISSAYVAPETRET------KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA 892 (968)
T ss_pred ccccccC----------CCccccccccCcccccC------CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH
Confidence 4332211 01134458999999876 357789999999999999999998874211 0
Q ss_pred ---------hc-c-CCC----C------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------RN-T-ASI----P------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------~~-~-~~i----P------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..+ + ..+.+++.+|++.+|.+||++.++++.-
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L 948 (968)
T PLN00113 893 RYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948 (968)
T ss_pred HHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHH
Confidence 00 0 001 1 1244567799999999999999998753
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.91 E-value=4.6e-23 Score=205.91 Aligned_cols=210 Identities=21% Similarity=0.319 Sum_probs=169.9
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIV 105 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIV 105 (778)
|+.|. | .||+++...+|+.++||++....... ..+.+.+|++.++.++|++|+++++.+... ...|++
T Consensus 1 l~~g~~~--~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~~~~~~ 69 (215)
T cd00180 1 LGEGGFG--TVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE--------NHLYLV 69 (215)
T ss_pred CCcCCce--EEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC--------CeEEEE
Confidence 35555 5 89999998889999999998654321 346789999999999999999999999864 389999
Q ss_pred ecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEecccccccCCC
Q 004025 106 TEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 106 tE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dFgla~~~~~~ 182 (778)
+|++. +|..++.... .......+..++.+++.+|.+||+ .+++|+||+|.||+++. ++.++|+|||.+......
T Consensus 70 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~-~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 70 MEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHS-NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146 (215)
T ss_pred EecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence 99995 7999887652 112344456669999999999995 89999999999999999 899999999999877543
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhccCCCCcchHHHHHH
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQR 262 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~~~iP~~L~~~i~~ 262 (778)
.. ..........|++||..... ..++.+.|+|+||+++|++ ..+.+++.+
T Consensus 147 ~~------~~~~~~~~~~~~~pe~~~~~-----~~~~~~~D~~~lg~~~~~l-------------------~~~~~~l~~ 196 (215)
T cd00180 147 KS------LLKTIVGTPAYMAPEVLLGK-----GYYSEKSDIWSLGVILYEL-------------------PELKDLIRK 196 (215)
T ss_pred cc------hhhcccCCCCccChhHhccc-----CCCCchhhhHHHHHHHHHH-------------------HHHHHHHHH
Confidence 21 01112234589999998763 2567789999999999999 467889999
Q ss_pred HhccCCCCCCChHHHHhc
Q 004025 263 LLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 263 lL~~dP~~Rps~~~lL~~ 280 (778)
|+..+|..||++.+++++
T Consensus 197 ~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 197 MLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HhhCCcccCcCHHHHhhC
Confidence 999999999999999875
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.7e-24 Score=236.89 Aligned_cols=195 Identities=22% Similarity=0.227 Sum_probs=161.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------chhHHHHHHHHHHHHhcCC---CCCeeeEeeeeE
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------QDGHLAAARNGVKRLRTVR---HPNILAFLHSTE 89 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~------~~~~~~~~~~ev~~Lk~Lr---HPnIlk~~d~~e 89 (778)
.|+..+++|.|. | .|+.|++|+.+..|.||.+.++.. ++..+-.+-.|+.+|.+|+ |+||+|++++||
T Consensus 562 ~yttlq~lG~GAyG--kV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYG--KVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cceeeeeccccccc--eEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 699999999999 9 999999999999999999987532 1122334567999999998 999999999999
Q ss_pred ecccccCCcccEEEEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 90 VENIDATSTKITIYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
++. ++||+||.-+ +|.++|..+....... -+.+++||+-|+++|| +.+|||||||=+||.|+.+|
T Consensus 640 ddd--------~yyl~te~hg~gIDLFd~IE~kp~m~E~e---Ak~IFkQV~agi~hlh-~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 640 DDD--------YYYLETEVHGEGIDLFDFIEFKPRMDEPE---AKLIFKQVVAGIKHLH-DQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred cCC--------eeEEEecCCCCCcchhhhhhccCccchHH---HHHHHHHHHhcccccc-ccCceecccccccEEEecCC
Confidence 853 9999999985 5999998776433322 3555999999999999 59999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~ 241 (778)
-+||+|||.+...... |+- .+.++..|.|||++.+. ......-|||+||+|+|.+.....||
T Consensus 708 ~~klidfgsaa~~ksg------pfd--~f~gtv~~aapevl~g~-----~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 708 FVKLIDFGSAAYTKSG------PFD--VFVGTVDYAAPEVLGGE-----KYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred eEEEeeccchhhhcCC------Ccc--eeeeeccccchhhhCCC-----ccCCCcchhhhhhheeeEEEeccCCC
Confidence 9999999998776642 221 23566699999999885 45667889999999999998877665
No 399
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.89 E-value=2.7e-23 Score=223.99 Aligned_cols=238 Identities=15% Similarity=0.218 Sum_probs=173.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHh--cCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR--TVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk--~LrHPnIlk~~d~~e~e~~~g 95 (778)
.|-++.+.+++|. | .||+|... ++.||||+|.. ...+.+.+|-.+.+ .++|+||++|+..-+....+
T Consensus 210 ~pl~l~eli~~Grfg--~V~KaqL~--~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~- 279 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFG--CVWKAQLD--NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD- 279 (534)
T ss_pred CchhhHHHhhcCccc--eeehhhcc--CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-
Confidence 4677888899998 8 99999984 79999999974 23455666666555 56799999999876543222
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC--------CccccccCCCCeEEcCC
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC--------KLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~--------~ivH~dLkp~NI~v~~~ 165 (778)
...++|||||. ++|.+||+.+-..- .....++..+++||+|||++. .|+|||||..||+|.++
T Consensus 280 ---~~eywLVt~fh~kGsL~dyL~~ntisw----~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D 352 (534)
T KOG3653|consen 280 ---RMEYWLVTEFHPKGSLCDYLKANTISW----NSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND 352 (534)
T ss_pred ---ccceeEEeeeccCCcHHHHHHhccccH----HHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC
Confidence 45789999999 79999999875432 224455899999999999754 49999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC------
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR------ 239 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~------ 239 (778)
+...|+|||++..+....... . ....+++.+|||||++.+..+......-..+||||+|.++|||++.-.
T Consensus 353 lTccIaDFGLAl~~~p~~~~~--d--~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~ 428 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQG--D--THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGP 428 (534)
T ss_pred CcEEeeccceeEEecCCCCCc--c--hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCC
Confidence 999999999998886432211 1 223466779999999988533221222247899999999999998532
Q ss_pred ------CCCh--------hhh-------hccCCCCc---------chHHHHHHHhccCCCCCCChHHH
Q 004025 240 ------LSKT--------EEL-------RNTASIPK---------SLLPDYQRLLSSMPSRRLNSSKL 277 (778)
Q Consensus 240 ------p~~~--------~~l-------~~~~~iP~---------~L~~~i~~lL~~dP~~Rps~~~l 277 (778)
||.. +++ +....||. .+.+.+..|+..|+..|+|+.-+
T Consensus 429 vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 429 VPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred CCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 2221 111 11234543 35666788999999999997533
No 400
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.89 E-value=1.6e-22 Score=238.15 Aligned_cols=237 Identities=16% Similarity=0.204 Sum_probs=181.0
Q ss_pred CceeccCCCCCC-CceEEEEeEEC----C---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEe
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSK----D---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k----~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~ 90 (778)
+..+++.+|.|. | .|++|.-+ . ....|+||.+...... ...+.+..|+++|+.+ +||||+.+++++..
T Consensus 297 ~l~~~~~lg~g~fG--~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFG--QVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hccccceeeccccc--ceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 345667888888 8 78888643 1 1457999998765444 5677899999999998 59999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhC---------cCCC----cchHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELG---------LEGS----QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~---------~~~~----~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dL 155 (778)
. ..+++|+||| ++|..+|+... .... ....-+..+.+||+.|+.||++ .++|||||
T Consensus 374 ~--------~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDL 444 (609)
T KOG0200|consen 374 D--------GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDL 444 (609)
T ss_pred C--------CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhh
Confidence 2 3799999999 78999998876 1000 1222345569999999999996 89999999
Q ss_pred CCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccc--cCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWL--VGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 156 kp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~--~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
-..||+|+.+..+|++|||+++....... +...... .+..|||||.+.. ..++.++|+||||+++||
T Consensus 445 AaRNVLi~~~~~~kIaDFGlar~~~~~~~-----y~~~~~~~~LP~kWmApEsl~~------~~ft~kSDVWSfGI~L~E 513 (609)
T KOG0200|consen 445 AARNVLITKNKVIKIADFGLARDHYNKDY-----YRTKSSAGTLPVKWMAPESLFD------RVFTSKSDVWSFGILLWE 513 (609)
T ss_pred hhhhEEecCCCEEEEccccceeccCCCCc-----eEecCCCCccceeecCHHHhcc------CcccccchhhHHHHHHHH
Confidence 99999999999999999999997655321 1111111 3457999999886 467889999999999999
Q ss_pred HHh-CCCCCCh----hh----hh------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 234 LFS-GMRLSKT----EE----LR------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 234 l~t-g~~p~~~----~~----l~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
+|+ |..|+.. .. ++ ....++..+.++++.|++.+|+.||++.++.+
T Consensus 514 ifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 514 IFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 999 4556543 11 11 12345667788889999999999999998874
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.89 E-value=3.6e-22 Score=203.60 Aligned_cols=199 Identities=21% Similarity=0.281 Sum_probs=159.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|.+++.++.|. | +||+|+...+++.|+||.+...... ...+.+.+|++.++.++|+||+++++.+...
T Consensus 1 ~~~~~~i~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-------- 69 (225)
T smart00221 1 YELGKKLGEGAFG--KVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDP-------- 69 (225)
T ss_pred CceeeEeecCCCe--EEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecC--------
Confidence 67788898887 7 9999999988999999999865433 2467889999999999999999999998763
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+++|++ ++|.+++...... .....+..++.|++.+|.|||+ ++++|+||+|.||+++.++.++|+|||++.
T Consensus 70 ~~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~-~~i~h~di~~~ni~v~~~~~~~l~d~g~~~ 146 (225)
T smart00221 70 EPLYLVMEYCEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHS-LGIVHRDLKPENILLGMDGLVKLADFGLAR 146 (225)
T ss_pred CceEEEEeccCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeeCceee
Confidence 3789999999 3799888775421 2234456679999999999995 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
........ ..........|++||...+. ..++.++|+|+||+++|+|++|+.+|..
T Consensus 147 ~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~-----~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 147 FIHRDLAA-----LLKTVKGTPFYLAPEVLLGG-----KGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EecCcccc-----cccceeccCCcCCHhHhcCC-----CCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 77553200 01112344579999997421 3556699999999999999999998854
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.88 E-value=7.9e-24 Score=235.24 Aligned_cols=240 Identities=18% Similarity=0.229 Sum_probs=192.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
++-+|++..++|+|. | .||+++++.+++..+||+++..... ....+..|+-.++..+||||+.|++.|...
T Consensus 13 P~ddyellqrvgsgTyg--dvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr~---- 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYG--DVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLRR---- 84 (829)
T ss_pred CccchhheeeecCCccc--chhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhhh----
Confidence 567899999999999 8 9999999999999999999875443 356788999999999999999999999864
Q ss_pred CCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..++|+||||+ +|.+...-- +...+..|++.++..+.+|+|||+ .+-+|||||-.||+++..|++||.||
T Consensus 85 ----dklwicMEycgggslQdiy~~T---gplselqiayvcRetl~gl~ylhs-~gk~hRdiKGanilltd~gDvklaDf 156 (829)
T KOG0576|consen 85 ----DKLWICMEYCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLKYLHS-QGKIHRDIKGANILLTDEGDVKLADF 156 (829)
T ss_pred ----cCcEEEEEecCCCcccceeeec---ccchhHHHHHHHhhhhccchhhhc-CCcccccccccceeecccCceeeccc
Confidence 37999999994 576543322 233455688889999999999997 88899999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC-CCChhhhhcc---
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTEELRNT--- 249 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~-p~~~~~l~~~--- 249 (778)
|.+..+... ......+.+++.||+||+..-+ .+.+|...+|+|++|+.-.|+---++ +|+..+.+..
T Consensus 157 gvsaqitat------i~KrksfiGtpywmapEvaave---rkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm 227 (829)
T KOG0576|consen 157 GVSAQITAT------IAKRKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM 227 (829)
T ss_pred Cchhhhhhh------hhhhhcccCCccccchhHHHHH---hcccccccccccccccchhhhhhcCCcccccchHHHHHHh
Confidence 998776542 2224456677788999996421 23467889999999999888876554 4554443322
Q ss_pred -------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 -------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 -------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+-...+.++++.+|.+||++||+++.+|+|+
T Consensus 228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~ 272 (829)
T KOG0576|consen 228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHP 272 (829)
T ss_pred hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheece
Confidence 22334578889999999999999999999997
No 403
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=3e-22 Score=226.36 Aligned_cols=231 Identities=19% Similarity=0.260 Sum_probs=174.3
Q ss_pred ccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.+.||.|. | +||+|..--.|+ +|+||++....... ....+..|.-+|..|+|||++++++++..+
T Consensus 701 ~kvLGsgAfG--tV~kGiw~Pege~vKipVaiKvl~~~t~~~-~s~e~LdeAl~masldHpnl~RLLgvc~~s------- 770 (1177)
T KOG1025|consen 701 DKVLGSGAFG--TVYKGIWIPEGENVKIPVAIKVLIEFTSPK-ASIELLDEALRMASLDHPNLLRLLGVCMLS------- 770 (1177)
T ss_pred hceeccccce--eEEeeeEecCCceecceeEEEEeeccCCch-hhHHHHHHHHHHhcCCCchHHHHhhhcccc-------
Confidence 34678888 8 999999865554 78999887654433 344577888999999999999999999863
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+.|||+|+ +.|.++++..+. .....+.+-| ++||++||+||| +..+|||||-..||+|.+-..+|+.|||++
T Consensus 771 --~~qlvtq~mP~G~LlDyvr~hr~-~igsq~lLnw-~~QIAkgM~YLe-~qrlVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 771 --TLQLVTQLMPLGCLLDYVREHRD-NIGSQDLLNW-CYQIAKGMKYLE-EQRLVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred --hHHHHHHhcccchHHHHHHHhhc-cccHHHHHHH-HHHHHHHHHHHH-hcchhhhhhhhhheeecCCCeEEEEecchh
Confidence 588999999 789999987542 2223333444 999999999999 599999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~-------- 247 (778)
..+..+... +.......+..||+-|.+.. ..++.++|+||||+++||+++ |..|+..-..+
T Consensus 846 ~ll~~d~~e----y~~~~gK~pikwmale~i~~------~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ 915 (1177)
T KOG1025|consen 846 KLLAPDEKE----YSAPGGKVPIKWMALESIRI------RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK 915 (1177)
T ss_pred hccCccccc----ccccccccCcHHHHHHHhhc------cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc
Confidence 988764321 11112223346677676654 478899999999999999998 55565432222
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
+....+-.+...+.+||..|+..||.+.++..
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 12233445667788999999999999987754
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.85 E-value=1.1e-21 Score=239.15 Aligned_cols=199 Identities=21% Similarity=0.203 Sum_probs=136.1
Q ss_pred HhcCCC-CCeeeEeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 73 LRTVRH-PNILAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 73 Lk~LrH-PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
++.++| +||.++++++.....++ .....+++++|++ .+|.++|.... .......+..+++||+.||.|||+ ++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~-~gI 101 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDG-LDDDSIVRALECEDVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHS-QGI 101 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccc-cccchhhhhhccCCccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHh-CCe
Confidence 455666 67888888773322111 1124688889988 68999997532 112344567789999999999995 999
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCC-----CC------------------------CccccccccCCCC
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAA-----NG------------------------PMLQYAWLVGAQY 201 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~-----~~------------------------~~~~~~~~~~~~Y 201 (778)
+||||||+||||+..|.|||+|||++.......... .+ +.......++..|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999888888877777765432211000 00 0000112344579
Q ss_pred CCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--hhcc--CCCC-------cchHHHHHHHhccCCCC
Q 004025 202 KPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--LRNT--ASIP-------KSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 202 ~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--l~~~--~~iP-------~~L~~~i~~lL~~dP~~ 270 (778)
+|||++.+ ..++.++|||||||+||||++|.+++.... ...+ ..+| .....++.+||..+|.+
T Consensus 182 ~APE~~~~------~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~ 255 (793)
T PLN00181 182 TSPEEDNG------SSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSC 255 (793)
T ss_pred EChhhhcc------CCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhh
Confidence 99999876 356789999999999999999887765321 1110 0111 22456678899999999
Q ss_pred CCChHHHHhcc
Q 004025 271 RLNSSKLIENS 281 (778)
Q Consensus 271 Rps~~~lL~~~ 281 (778)
||++.++++|+
T Consensus 256 Rps~~eil~h~ 266 (793)
T PLN00181 256 RPSMSELLQSE 266 (793)
T ss_pred CcChHHHhhch
Confidence 99999999998
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.83 E-value=1.2e-20 Score=201.93 Aligned_cols=260 Identities=19% Similarity=0.246 Sum_probs=191.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
..|.+.+++|.|. + +||+++... .+..|++|.+...+. ...+.+|++.|..+. +-||+++.+++..++
T Consensus 36 ~~~~~v~kigeGsFs--sv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd- 108 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFS--SVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNND- 108 (418)
T ss_pred hhhhhhccccccchh--hhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccCC-
Confidence 4689999999998 7 899999887 688999999986533 346889999999997 999999999998643
Q ss_pred ccCCcccEEEEEecCCcC--hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCcEEE
Q 004025 94 DATSTKITIYIVTEPVMP--LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDWKL 170 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~~--L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~~KL 170 (778)
...||+||.+. ..+++...+ -..++|+++.++.||.++|. .|||||||||+|++.+ ..+.-.|
T Consensus 109 -------~v~ivlp~~~H~~f~~l~~~l~------~~~i~~Yl~~ll~Al~~~h~-~GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 109 -------QVAIVLPYFEHDRFRDLYRSLS------LAEIRWYLRNLLKALAHLHK-NGIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred -------eeEEEecccCccCHHHHHhcCC------HHHHHHHHHHHHHHhhhhhc-cCccccCCCccccccccccCCceE
Confidence 89999999953 556665543 23378889999999999995 9999999999999998 5688899
Q ss_pred EecccccccCCCC-----------CC------------------CCC---------CccccccccCCCCCCccccccccc
Q 004025 171 HAFDVLSEFDGNN-----------EA------------------ANG---------PMLQYAWLVGAQYKPVELAKSDWT 212 (778)
Q Consensus 171 ~dFgla~~~~~~~-----------~~------------------~~~---------~~~~~~~~~~~~Y~aPE~~~~~~~ 212 (778)
.|||++...+... .. ..+ +.......+++.|+|||++...
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~-- 252 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC-- 252 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc--
Confidence 9999987321100 00 000 1111233456689999998764
Q ss_pred cccCCCCCcchhHHHHHHHHHHHhCCCCCC-h----------------hhhh---------------c------------
Q 004025 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSK-T----------------EELR---------------N------------ 248 (778)
Q Consensus 213 ~~~~~~~~~~DiwSLG~liyel~tg~~p~~-~----------------~~l~---------------~------------ 248 (778)
...+.++||||.|+++.-++++..||- . ..++ +
T Consensus 253 ---~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~ 329 (418)
T KOG1167|consen 253 ---PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFE 329 (418)
T ss_pred ---cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchh
Confidence 356678999999999999999987651 0 0000 0
Q ss_pred ------c--------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcccC
Q 004025 249 ------T--------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLK 308 (778)
Q Consensus 249 ------~--------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~~k 308 (778)
+ .-+|..+.+++.+||..||.+|+++++.|+|+ ||. ..-++...++.+...
T Consensus 330 s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp--------FF~-~~~~~~~~~~~~~~~ 400 (418)
T KOG1167|consen 330 TLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP--------FFD-EADRTERGLQDLLQE 400 (418)
T ss_pred ccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc--------CCc-chhhhhhhhHHHhhc
Confidence 0 11233577889999999999999999999997 776 333344444433333
Q ss_pred ChhhH
Q 004025 309 DSVEK 313 (778)
Q Consensus 309 ~~~EK 313 (778)
...++
T Consensus 401 ~~~~~ 405 (418)
T KOG1167|consen 401 GTFRK 405 (418)
T ss_pred Cchhh
Confidence 33333
No 406
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.82 E-value=6.7e-20 Score=193.24 Aligned_cols=241 Identities=16% Similarity=0.187 Sum_probs=178.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.++++...+.+|. | .||.|.+++.. +.|-+|.+.. ...+-+...+..|--.|.-+.|||++.+.++...+.
T Consensus 284 ~Rv~l~~llqEGtFG--ri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFG--RIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hheechhhhhcCchh--heeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 3455555667787 8 89999776433 4555666543 344556777888888999999999999999887543
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCC-----CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEG-----SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-----~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
..-++++.+. +.|..+|...+... ......+..+..|++.|++|||+ .++||.||-..|.+|++.
T Consensus 361 -------~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~-~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 361 -------ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred -------CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh-cCcccchhhhhcceehhh
Confidence 2445555555 68999988544211 11222355668899999999996 999999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCC--
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSK-- 242 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~-- 242 (778)
-.+||+|=.+++.+-..+... ...+-..+..||++|.+.+ ..++.++|+||||++||||++ |+.|+-
T Consensus 433 LqVkltDsaLSRDLFP~DYhc----LGDnEnRPvkWMslEal~n------~~yssasDvWsfGVllWELmtlg~~PyaeI 502 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHC----LGDNENRPVKWMSLEALQN------SHYSSASDVWSFGVLLWELMTLGKLPYAEI 502 (563)
T ss_pred eeEEeccchhccccCcccccc----cCCCCCCcccccCHHHHhh------hhhcchhhhHHHHHHHHHHHhcCCCCcccc
Confidence 999999999988775432111 0111123448999999887 478899999999999999998 555542
Q ss_pred -----------hhhhhccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 243 -----------TEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 243 -----------~~~l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+..+.+..++|++|...+.-||...|+.||+++++...
T Consensus 503 DPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~c 551 (563)
T KOG1024|consen 503 DPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVIC 551 (563)
T ss_pred CHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 22344567899999999999999999999999998654
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1e-20 Score=191.45 Aligned_cols=225 Identities=15% Similarity=0.207 Sum_probs=165.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
.|+|.+.+|+|. | .+-.+.++.+++.+++|.+.+.. .....+.+|++.---|. |.||+.-|++....
T Consensus 25 ~y~I~k~lgeG~Fg--kIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt------ 93 (378)
T KOG1345|consen 25 VYTINKQLGEGRFG--KILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQT------ 93 (378)
T ss_pred hhhHHHHhccccee--eEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhc------
Confidence 599999999999 8 99999999999999999988643 23456888888766664 88999888765432
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc--CCCcEEEEec
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT--QTLDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~--~~g~~KL~dF 173 (778)
...+++++||+ ++|...+...+.. +.+.+....|+++||.|+|+ .++||||||.+||+|- +.-.+|||||
T Consensus 94 -~d~YvF~qE~aP~gdL~snv~~~Gig----E~~~K~v~~ql~SAi~fMHs-knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 94 -SDAYVFVQEFAPRGDLRSNVEAAGIG----EANTKKVFAQLLSAIEFMHS-KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred -CceEEEeeccCccchhhhhcCccccc----HHHHHHHHHHHHHHHHHhhc-cchhhcccccceEEEecCCccEEEeeec
Confidence 23788999999 7898877765543 33455669999999999995 8999999999999995 3347999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|..+..+..-. +.. -...|.+||+...- ..-+-......|+|.||+++|.+++|.+|++....
T Consensus 168 G~t~k~g~tV~-----~~~----~~~~y~~pe~~~~~-~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~ 237 (378)
T KOG1345|consen 168 GLTRKVGTTVK-----YLE----YVNNYHAPELCDTV-VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE 237 (378)
T ss_pred ccccccCceeh-----hhh----hhcccCCcHHHhhc-cccceEecccccchheeeeeeeeecCCCcchhhhccCchHHH
Confidence 99877654211 111 12368888886532 11112234578999999999999999999864322
Q ss_pred ------hccCCCC-------cchHHHHHHHhccCCCCC
Q 004025 247 ------RNTASIP-------KSLLPDYQRLLSSMPSRR 271 (778)
Q Consensus 247 ------~~~~~iP-------~~L~~~i~~lL~~dP~~R 271 (778)
+....+| ..+...+++-|...++.|
T Consensus 238 ~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 238 WEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred HHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 1122344 345566778888888888
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.4e-18 Score=191.10 Aligned_cols=169 Identities=12% Similarity=0.072 Sum_probs=123.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-~g~~VaIK~~~~~~~---~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
.....|++++.||.|+ | +||+|+++. +++.|+||++..... .+...+.+++|+++|+.|+|+||+..+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg--~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFS--TVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccCCceEccEEeecCcE--EEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3456799999999998 8 999999876 678889998764311 233456799999999999999998533221
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccccc-CCCCeEEcCCCc
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLD 167 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dL-kp~NI~v~~~g~ 167 (778)
. ..||||||| ++|.. +.. . . . ..++.|++.||.|||+ .+|+|||| ||+||+++.+|.
T Consensus 91 -~--------~~~LVmE~~~G~~L~~-~~~---~--~-~---~~~~~~i~~aL~~lH~-~gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 -G--------KDGLVRGWTEGVPLHL-ARP---H--G-D---PAWFRSAHRALRDLHR-AGITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred -C--------CcEEEEEccCCCCHHH-hCc---c--c-h---HHHHHHHHHHHHHHHH-CCCeeCCCCCcceEEEcCCCC
Confidence 1 479999999 35652 211 0 1 1 1237899999999995 99999999 999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCcccc----ccccCCCCCCccccccc
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQY----AWLVGAQYKPVELAKSD 210 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~----~~~~~~~Y~aPE~~~~~ 210 (778)
+||+|||+++.+...+.. ..+..+ .......|++||.+...
T Consensus 151 ikLiDFGlA~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 151 AAVIDFQLASVFRRRGAL--YRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred EEEEECccceecccCcch--hhhhhhhhhhhhhccCccCCcccCChh
Confidence 999999999987653211 122111 11233478999988754
No 409
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.77 E-value=2.7e-18 Score=169.84 Aligned_cols=144 Identities=17% Similarity=0.111 Sum_probs=110.7
Q ss_pred cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCC
Q 004025 110 MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189 (778)
Q Consensus 110 ~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~ 189 (778)
++|.+++...+. ......+..+++||+.||.|||+ .+ ||+||+++.+|.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcCccceee--ccceEeecccc------
Confidence 468888876432 12344566779999999999996 44 999999999999999 99887664421
Q ss_pred ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----hhc----cC----------
Q 004025 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LRN----TA---------- 250 (778)
Q Consensus 190 ~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l~~----~~---------- 250 (778)
..++..|+|||++.+ ..++.++|||||||++|||++|..||.... +.. ..
T Consensus 64 -----~~g~~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (176)
T smart00750 64 -----SRVDPYFMAPEVIQG------QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNL 132 (176)
T ss_pred -----CCCcccccChHHhcC------CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccH
Confidence 134568999999976 356789999999999999999998875321 110 01
Q ss_pred -CCCc--chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 251 -SIPK--SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 251 -~iP~--~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.++. .+.+++.+||..+|.+||++.++++|+
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~ 166 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHC 166 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHH
Confidence 1122 478899999999999999999999997
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=6.4e-19 Score=205.71 Aligned_cols=241 Identities=17% Similarity=0.153 Sum_probs=176.6
Q ss_pred Cce-eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC---CCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 20 PYN-IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT---NAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 20 ~Y~-i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~---~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+|- .+..+|.|. | .|+...+....+.+..|.+... ...+ .....+..|+-+-.+|+||||+..++.+..-.
T Consensus 318 ~y~~~~~~~g~ga~g--~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~- 394 (601)
T KOG0590|consen 318 KYGKPGRVLGSGAYG--SVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID- 394 (601)
T ss_pred ccCCccceeeecccC--ceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-
Confidence 453 334556666 6 6888888877777777766521 1122 22223667888888999999988887776532
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++-.|||| .+|...+....... ...+.+.+.|++.||+|||. .+|.|||||++|++++.+|.+||+|
T Consensus 395 -------~~~~~mE~~~~Dlf~~~~~~~~~~---~~e~~c~fKqL~~Gv~y~h~-~GiahrdlK~enll~~~~g~lki~D 463 (601)
T KOG0590|consen 395 -------GILQSMEYCPYDLFSLVMSNGKLT---PLEADCFFKQLLRGVKYLHS-MGLAHRDLKLENLLVTENGILKIID 463 (601)
T ss_pred -------cchhhhhcccHHHHHHHhcccccc---hhhhhHHHHHHHHHHHHHHh-cCceeccCccccEEEecCCceEEee
Confidence 344459999 46888887752221 22244559999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||.+..+.-..+.. .....+..+...|+|||++.+. ...+..+|+||.|++++.|.+|+.|+......
T Consensus 464 fg~~~vf~~~~e~~--~~~~~g~~gS~pY~apE~~~~~-----~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~ 536 (601)
T KOG0590|consen 464 FGAASVFRYPWEKN--IHESSGIVGSDPYLAPEVLTGK-----EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK 536 (601)
T ss_pred cCcceeeccCcchh--hhhhcCcccCCcCcCccccccc-----ccCcchhhhhhccceEEEEecCCCccccccccccchh
Confidence 99988775532211 1223445566799999998874 45567899999999999999998876422111
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
-...+|...+..+.+||+.+|.+|.+++++++.+
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~ 586 (601)
T KOG0590|consen 537 TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDE 586 (601)
T ss_pred hhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhCh
Confidence 0124677788889999999999999999999987
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.72 E-value=3.6e-16 Score=165.16 Aligned_cols=243 Identities=20% Similarity=0.275 Sum_probs=177.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh-HHHHHHHHHHHHhcCCCC-CeeeEeeeeEecccccCC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG-HLAAARNGVKRLRTVRHP-NILAFLHSTEVENIDATS 97 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~-~~~~~~~ev~~Lk~LrHP-nIlk~~d~~e~e~~~g~~ 97 (778)
|.+.+.+|.|. | .||.+.+. ..+++|.+........ ....+.+|+..++.+.|+ +|+++++.+...
T Consensus 2 ~~~~~~l~~g~~~--~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~------ 70 (384)
T COG0515 2 YRILRKLGEGSFG--EVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE------ 70 (384)
T ss_pred ceeEEeecCCCCe--EEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC------
Confidence 78888899776 6 89999986 8899999987654442 567789999999999988 799999999553
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~dFg 174 (778)
...++++|++ ..|.+++................++.|++.+|.|+|. .+++|||+||+||+++..+ ..|++|||
T Consensus 71 --~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~-~~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 71 --GSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS-KGIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeecCCCCeEEEeccC
Confidence 3589999999 3577666554311122334456669999999999995 8899999999999999988 79999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~--- 247 (778)
.+....................+...|++||.+.+.- ........|+|++|+++++++.|..|+..... .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~---~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~ 224 (384)
T COG0515 148 LAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS---LAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL 224 (384)
T ss_pred cceecCCCCccccccccccccccccccCCHHHhcCCC---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH
Confidence 9986654321110000122335566999999987620 02466789999999999999999877643321 0
Q ss_pred -cc---------CCCC--------cchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -NT---------ASIP--------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -~~---------~~iP--------~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.+ ..+. ..+...+.+++..+|..|.+......+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 225 KIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 0111 246677889999999999988766654
No 412
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.70 E-value=4.7e-17 Score=172.22 Aligned_cols=240 Identities=15% Similarity=0.160 Sum_probs=144.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCC----------CCCeeeEeee
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVR----------HPNILAFLHS 87 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~Lr----------HPnIlk~~d~ 87 (778)
.+..++.||.|+ + .||.+++..+|++++||++...... ....+.+++|.-....+. |-.++.-+|.
T Consensus 13 ~l~~~~~i~~g~~~--~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~ 90 (288)
T PF14531_consen 13 TLVRGRIIGKGGFS--IVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL 90 (288)
T ss_dssp EEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred EEEEccccccCCce--EEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence 456777888886 5 8999999999999999998865422 234556666654444332 2233334444
Q ss_pred eEeccccc---CCccc------EEEEEecCC-cChHHHHHH---hCcCCCcchHHHHHH-HHHHHHHHHHHHcCCCcccc
Q 004025 88 TEVENIDA---TSTKI------TIYIVTEPV-MPLSEKIKE---LGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 88 ~e~e~~~g---~~~~~------~lyIVtE~v-~~L~~~L~~---~~~~~~~~~~~i~~g-l~QI~~aL~fLH~~~~ivH~ 153 (778)
........ .+.+. ..+++++.. ++|..++.. ............+.. ..|+++.+++||. .+++|+
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~-~GlVHg 169 (288)
T PF14531_consen 91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS-YGLVHG 169 (288)
T ss_dssp EEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEES
T ss_pred EEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh-cceEec
Confidence 33211000 00011 235666666 577766553 222211111122222 4899999999996 899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccc--cccccCCCCCcchhHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSD--WTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~--~~~~~~~~~~~~DiwSLG~li 231 (778)
||+|+|+|++.+|.++|+||+.+...+.. + .. ...+..|.|||..... +......++.+.|.|+||++|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~-------~-~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR-------Y-RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE-------E-EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce-------e-ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 99999999999999999999988766541 1 11 2334579999986431 111112356789999999999
Q ss_pred HHHHhCCCCCChh--------hhhccCCCCcchHHHHHHHhccCCCCC
Q 004025 232 YELFSGMRLSKTE--------ELRNTASIPKSLLPDYQRLLSSMPSRR 271 (778)
Q Consensus 232 yel~tg~~p~~~~--------~l~~~~~iP~~L~~~i~~lL~~dP~~R 271 (778)
|.|+++..||... ....+.++|..+..+++.||+.||..|
T Consensus 241 y~lWC~~lPf~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999887521 344556899999999999999999887
No 413
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.68 E-value=1.6e-16 Score=168.29 Aligned_cols=192 Identities=18% Similarity=0.167 Sum_probs=132.2
Q ss_pred CCCCeeeEeeeeEecc-------------------cccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHH
Q 004025 77 RHPNILAFLHSTEVEN-------------------IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQ 136 (778)
Q Consensus 77 rHPnIlk~~d~~e~e~-------------------~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~Q 136 (778)
+||||++++..|.++- ..|-+.+.++|+||..+ ..|..++..+.... ..-..++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~~s~----r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRHRSY----RTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCCCch----HHHHHHHHH
Confidence 6999999998886532 11223467999999998 68999998765432 222344999
Q ss_pred HHHHHHHHHcCCCccccccCCCCeEEcCC--C--cEEEEecccccccCCCCCCCCCCcccc-ccccCC-CCCCccccccc
Q 004025 137 IAKAVSFLNNDCKLVHGNVCLSSVVVTQT--L--DWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGA-QYKPVELAKSD 210 (778)
Q Consensus 137 I~~aL~fLH~~~~ivH~dLkp~NI~v~~~--g--~~KL~dFgla~~~~~~~~~~~~~~~~~-~~~~~~-~Y~aPE~~~~~ 210 (778)
+++|+.||| +.++.|||+|.+||+|.-+ + .+.|.|||+|---+.-+ -.-++... ...++. ..|+||+...-
T Consensus 350 lLEav~hL~-~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hG--lqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLH-KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHG--LQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHH-HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccc--cccccccccccCCCcceecchhhhhcC
Confidence 999999999 4999999999999999633 2 37899999875433211 11122111 123343 67999997531
Q ss_pred cccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----------hhhcc----CCCCcchHHHHHHHhccCCCCCCChH
Q 004025 211 WTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----------ELRNT----ASIPKSLLPDYQRLLSSMPSRRLNSS 275 (778)
Q Consensus 211 ~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----------~l~~~----~~iP~~L~~~i~~lL~~dP~~Rps~~ 275 (778)
-.....-.-.++|.|+.|.+-||+|....||... +-.++ ..+|+.+++++..+|+.||.+|+++.
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 1000011224899999999999999988777431 11112 45777889999999999999999974
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.68 E-value=1.7e-15 Score=165.66 Aligned_cols=203 Identities=14% Similarity=0.106 Sum_probs=153.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC----CCeeeEeeeeE-ecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH----PNILAFLHSTE-VEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH----PnIlk~~d~~e-~e~ 92 (778)
.|.+.++||.|+ | .||.|.+..++ ..+++|+-........ ..++.|+.+++.+.+ +++..+++... .
T Consensus 19 ~~~i~~~iG~G~fG--~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~-- 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFG--AVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRST-- 92 (322)
T ss_pred ceEEeeeccccCCc--eEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCC--
Confidence 899999999998 9 99999998775 5788887765322221 157788899998873 58889998884 3
Q ss_pred cccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-----C
Q 004025 93 IDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-----L 166 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-----g 166 (778)
..+-||||+.++ +|.++.+... ........+..+..|++.+|.+||+ .+++||||||+|+.+... .
T Consensus 93 ------~~~~~iVM~l~G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~-~G~iHRDiKp~N~~~g~~~~~~~~ 164 (322)
T KOG1164|consen 93 ------EDFNFIVMSLLGPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS-KGFIHRDIKPENFVVGQSSRSEVR 164 (322)
T ss_pred ------CceeEEEEeccCccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh-cCcccCCcCHHHeeecCCCCcccc
Confidence 348899999996 5888776655 3334445566668999999999995 999999999999999865 3
Q ss_pred cEEEEeccccc--ccCCCCCCCCCCcc--ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 167 DWKLHAFDVLS--EFDGNNEAANGPML--QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 167 ~~KL~dFgla~--~~~~~~~~~~~~~~--~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
.+.|.|||+++ .+.........+.. ...+.++.+|.++....+ ...+..-|+||++.++.|++.|..|+.
T Consensus 165 ~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~------~e~~r~DDles~~Y~l~el~~g~LPW~ 238 (322)
T KOG1164|consen 165 TLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG------IEQGRRDDLESLFYMLLELLKGSLPWE 238 (322)
T ss_pred eEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC------CccCCchhhhhHHHHHHHHhcCCCCCc
Confidence 59999999998 33222211101111 123346679999998776 467789999999999999999977653
No 415
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.66 E-value=7.5e-16 Score=160.31 Aligned_cols=204 Identities=13% Similarity=0.149 Sum_probs=164.3
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
+-...|.+|++||+|. | .+|.|+..-+|++||||.-..++ ....++.|.+..|.|. .++|..++.+...
T Consensus 25 ~VG~hyrVGkKIGeGsFG--~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqe--- 95 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFG--VLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQE--- 95 (449)
T ss_pred EecccceeccccccCcce--eeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccc---
Confidence 4456899999999999 9 99999999999999999866543 3456888999888886 7899998877664
Q ss_pred ccCCcccEEEEEecCCcC-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-----c
Q 004025 94 DATSTKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-----D 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-----~ 167 (778)
+.+-.+|+|.++| |.+++.-++.. .....+..+..|++.-+.++|+ ..+|.|||||+|++|..-| .
T Consensus 96 -----G~~NiLVidLLGPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~-k~LIYRDIKPdNFLIGrp~~k~~n~ 167 (449)
T KOG1165|consen 96 -----GKYNILVIDLLGPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHE-KDLIYRDIKPDNFLIGRPGTKDANV 167 (449)
T ss_pred -----cchhhhhhhhhCcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHh-cceeecccCccceeecCCCCCCCce
Confidence 3477899999975 88877766532 2334567779999999999995 8999999999999997443 4
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCC-CCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~-~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
+.++|||++..+.+.......|+.....+.++ +||+--...+ ...+..-|+=+||.++++.+-|..|+.
T Consensus 168 IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG------rEQSRRDDLEaLGHvFmYFLRGsLPWQ 237 (449)
T KOG1165|consen 168 IHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQ 237 (449)
T ss_pred EEEEeccchhhhcCccccccCccccccccccceeeeEeecccc------chhhhhhhHHHhhhhhhhhccCCCccc
Confidence 99999999999988765555577666666555 9999776665 455678899999999999999987764
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.64 E-value=4.5e-16 Score=157.09 Aligned_cols=139 Identities=12% Similarity=0.087 Sum_probs=100.4
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh------------------------HHHHHHHHHHHHhcCCC
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG------------------------HLAAARNGVKRLRTVRH 78 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~------------------------~~~~~~~ev~~Lk~LrH 78 (778)
.+.||.|+ | +||.|.++ +|+.|+||++........ ......+|++.|+.|.|
T Consensus 2 ~~~ig~G~~~--~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 2 NGCISTGKEA--NVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred CCccccccce--EEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888 8 99999987 899999999975421100 01234569999999998
Q ss_pred CCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHH-HHHhCcCCCcchHHHHHHHHHHHHHHHHH-HcCCCccccc
Q 004025 79 PNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK-IKELGLEGSQRDEYYAWGLNQIAKAVSFL-NNDCKLVHGN 154 (778)
Q Consensus 79 PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~-L~~~~~~~~~~~~~i~~gl~QI~~aL~fL-H~~~~ivH~d 154 (778)
++|..... +... ..|||||||+ .|... ++... ...+.+..++.||+.+|.+| |+ ++++|||
T Consensus 79 ~~v~~p~~-~~~~---------~~~iVmE~i~g~~l~~~~~~~~~----~~~~~~~~i~~qi~~~L~~l~H~-~giiHrD 143 (190)
T cd05147 79 AGIPCPEP-ILLK---------SHVLVMEFIGDDGWAAPRLKDAP----LSESKARELYLQVIQIMRILYQD-CRLVHAD 143 (190)
T ss_pred CCCCCCcE-EEec---------CCEEEEEEeCCCCCcchhhhcCC----CCHHHHHHHHHHHHHHHHHHHHh-CCcccCC
Confidence 88743322 2221 2389999994 34333 32222 12344566699999999999 64 8999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCC
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||+||+++ +|.++|+|||++.....
T Consensus 144 lkP~NIli~-~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 144 LSEYNLLYH-DGKLYIIDVSQSVEHDH 169 (190)
T ss_pred CCHHHEEEE-CCcEEEEEccccccCCC
Confidence 999999998 58899999999986643
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.62 E-value=1.9e-15 Score=152.56 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=104.1
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------------------hHHHHHHHHHHHHhcCC
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------------------GHLAAARNGVKRLRTVR 77 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------------------------~~~~~~~~ev~~Lk~Lr 77 (778)
|.+.||.|+ | .||+|++. +|+.|+||++....... .....+++|++.+.+++
T Consensus 1 ~~~~ig~G~~~--~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 1 INGCISTGKEA--NVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred CCceeecCCCc--EEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 356788888 8 99999987 89999999998652110 01233568999999999
Q ss_pred CCCeeeEeeeeEecccccCCcccEEEEEecCCcC--hH-HHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMP--LS-EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 78 HPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~~--L~-~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
|++|......... ..||||||+.. +. ..+..... .......++.|++.+|.+||...+++|||
T Consensus 78 ~~~i~~p~~~~~~----------~~~lVmE~~~g~~~~~~~l~~~~~----~~~~~~~i~~~l~~~l~~lH~~~givHrD 143 (190)
T cd05145 78 EAGVPVPEPILLK----------KNVLVMEFIGDDGSPAPRLKDVPL----EEEEAEELYEQVVEQMRRLYQEAGLVHGD 143 (190)
T ss_pred hCCCCCceEEEec----------CCEEEEEEecCCCchhhhhhhccC----CHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 9987544333322 24899999942 33 33433222 22334556899999999999548999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCC
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||+||+++ +|.++|+|||+++.+..
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999998 89999999999987754
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.62 E-value=1.2e-15 Score=156.95 Aligned_cols=177 Identities=8% Similarity=0.016 Sum_probs=125.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHH------HHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAA------ARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~------~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+.+|.+.+.++.|+ | .||.... ++..|+||++..+.... ..... +.+|++.+.+|+||||..+.+.++
T Consensus 30 ~~~y~~~~~l~~~~f~--~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 30 SYNIKTIKVFRNIDDT--KVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred hCceEEEEEecCCCce--EEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 56899999999887 7 8998644 57789999997554332 22223 679999999999999999999877
Q ss_pred ecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc
Q 004025 90 VENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~ 167 (778)
........-....|||||||. +|.++.. ...+ . +.+|+.+|..||. .+++|||++|+||+++.+|
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~~-~---~~~i~~~l~~lH~-~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISED-V---KAKIKASIESLHQ-HGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh-------ccHH-H---HHHHHHHHHHHHH-cCCccCCCChHHEEEeCCC-
Confidence 532110000125899999994 5766521 1122 2 6799999999995 9999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHH
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~ 235 (778)
++|+|||..+........ . . +... ..+..++|+|+||+.+..+.
T Consensus 173 i~liDfg~~~~~~e~~a~---d----------~-----~vle------r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK---D----------R-----IDLE------RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH---H----------H-----HHHH------hHhcccccccceeEeehHHH
Confidence 999999988766432100 0 0 1111 23446899999999876544
No 419
>PRK10345 hypothetical protein; Provisional
Probab=99.57 E-value=2.4e-14 Score=146.46 Aligned_cols=136 Identities=13% Similarity=0.106 Sum_probs=102.1
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-----CCCCeeeEeeeeEecccccC
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-----RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-----rHPnIlk~~d~~e~e~~~g~ 96 (778)
-.+.||.|+ | .||. ++.++.. +||++..... ...+.+.+|++.++.| .||||++++++++++.+.
T Consensus 6 ~~~~LG~G~~~--~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~-- 76 (210)
T PRK10345 6 EQSPLGTGRHR--KCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT-- 76 (210)
T ss_pred CcceecCCCce--EEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC--
Confidence 346789988 7 8995 7777666 5999876422 2345689999999999 579999999999986533
Q ss_pred CcccEEE-EEecCCc----ChHHHHHHhCcCCCcchHHHHHHHHHHHHHH-HHHHcCCCccccccCCCCeEEcCC----C
Q 004025 97 STKITIY-IVTEPVM----PLSEKIKELGLEGSQRDEYYAWGLNQIAKAV-SFLNNDCKLVHGNVCLSSVVVTQT----L 166 (778)
Q Consensus 97 ~~~~~ly-IVtE~v~----~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL-~fLH~~~~ivH~dLkp~NI~v~~~----g 166 (778)
..+| +|+||++ +|.+++++... .+.. ..+.|++.++ .|||+ .+|+||||||+||+++.. +
T Consensus 77 ---g~v~~~I~e~~G~~~~tL~~~l~~~~~-----~e~~-~~~~~~L~~l~~yLh~-~~IvhrDlKp~NILl~~~~~~~~ 146 (210)
T PRK10345 77 ---GYVYDVIADFDGKPSITLTEFAEQCRY-----EEDV-AQLRQLLKKLKRYLLD-NRIVTMELKPQNILCQRISESEV 146 (210)
T ss_pred ---eEEEEEEecCCCCcchhHHHHHHcccc-----cHhH-HHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEeccCCCCC
Confidence 2544 7899953 69999976432 1112 2378888888 89995 999999999999999743 3
Q ss_pred cEEEEeccccc
Q 004025 167 DWKLHAFDVLS 177 (778)
Q Consensus 167 ~~KL~dFgla~ 177 (778)
.++|+||+.+.
T Consensus 147 ~~~LiDg~G~~ 157 (210)
T PRK10345 147 IPVVCDNIGES 157 (210)
T ss_pred cEEEEECCCCc
Confidence 79999955443
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.55 E-value=1.2e-15 Score=171.36 Aligned_cols=214 Identities=15% Similarity=0.237 Sum_probs=161.8
Q ss_pred EeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHH
Q 004025 38 QGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSE 114 (778)
Q Consensus 38 ~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~ 114 (778)
++...+.|.-+++|+..+..........-+.|-.++..++ ||.+++.+..++++. .+|++.+++. .|..
T Consensus 15 k~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~--------kl~l~ld~~rgg~lft 86 (612)
T KOG0603|consen 15 KAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG--------KLYLILDFLRGGDLFT 86 (612)
T ss_pred HhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc--------chhHhhhhcccchhhh
Confidence 3344556788888888776544333335566777888887 999999999999854 8999999993 5665
Q ss_pred HHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccc
Q 004025 115 KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194 (778)
Q Consensus 115 ~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~ 194 (778)
.+..... ...+..+..+..++-|+.++| +.+++|+|+|++||+++.+|.+|+.|||+.+..-....
T Consensus 87 ~l~~~~~---f~~~~~~~~~aelaLald~lh-~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~---------- 152 (612)
T KOG0603|consen 87 RLSKEVM---FDELDVAFYLAELALALDHLH-KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI---------- 152 (612)
T ss_pred ccccCCc---hHHHHHHHHHHHHHHHHhhcc-hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh----------
Confidence 5554332 233446666899999999999 49999999999999999999999999999987754321
Q ss_pred cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc----CCCCcch----HHHHHHHhcc
Q 004025 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----ASIPKSL----LPDYQRLLSS 266 (778)
Q Consensus 195 ~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----~~iP~~L----~~~i~~lL~~ 266 (778)
.+++..||+||++++ ...++|.||||+++|||++|..+|..+..+.+ ..+|..+ ...+..|+..
T Consensus 153 ~cgt~eymApEI~~g--------h~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r 224 (612)
T KOG0603|consen 153 ACGTYEYRAPEIING--------HLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKR 224 (612)
T ss_pred cccchhhhhhHhhhc--------cCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhh
Confidence 134558999999884 34689999999999999999999988655544 2355544 4556778888
Q ss_pred CCCCCCCh-----HHHHhcc
Q 004025 267 MPSRRLNS-----SKLIENS 281 (778)
Q Consensus 267 dP~~Rps~-----~~lL~~~ 281 (778)
+|..|.-. .++.+|+
T Consensus 225 ~p~nrLg~~~~~~~eik~h~ 244 (612)
T KOG0603|consen 225 NPENRLGAGPDGVDEIKQHE 244 (612)
T ss_pred CHHHHhccCcchhHHHhccc
Confidence 99999865 4555664
No 421
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.54 E-value=2.8e-14 Score=142.94 Aligned_cols=203 Identities=13% Similarity=0.081 Sum_probs=149.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC-CCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH-PnIlk~~d~~e~e~~~ 94 (778)
..-.|.+.++||+|+ | .+|.|....+|+.||||+-..+. . ..++..|.++-+.|+| .+|..+..+..+
T Consensus 13 v~gky~lvrkiGsGSFG--dIy~~~~i~~ge~VAiK~Es~~a-~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e---- 82 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFG--DIYLGISITSGEEVAIKLESSKA-K---HPQLLYESKVYRILQGGVGIPHIRHYGTE---- 82 (341)
T ss_pred eccceEEEEeecCCchh--heeeeeeccCCceEEEEeecccC-C---CcchhHHHHHHHHhccCCCCchhhhhccc----
Confidence 345799999999999 9 99999999999999999965432 2 2356678888888874 566666666654
Q ss_pred cCCcccEEEEEecCCcC-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc---CCCcEEE
Q 004025 95 ATSTKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKL 170 (778)
Q Consensus 95 g~~~~~~lyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~---~~g~~KL 170 (778)
+.+-.+|||..+| |.+++.-.... .....+....-|++.-+.|+|. .+++||||||+|++.. ....+.|
T Consensus 83 ----~~ynvlVMdLLGPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH~-r~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 83 ----KDYNVLVMDLLGPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVHL-RNFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred ----cccceeeeeccCccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHHh-hccccccCCccceeeccccccceEEE
Confidence 3477999999976 76666543321 1122344557899999999996 8999999999999996 3456999
Q ss_pred EecccccccCCCCCCCCCCcccccc-ccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
+|||++..+.+.......|+..... .++.+|.+--...+ ...+..-|+=|+|.++.++--|..|++
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g------~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG------IEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhh------hhhhhhhhhhhhcceeeeeecCCCccc
Confidence 9999999887654444445544433 34448887555443 233457899999999888877877764
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.54 E-value=4e-14 Score=143.09 Aligned_cols=191 Identities=12% Similarity=0.070 Sum_probs=129.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~--~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g 95 (778)
++.+...++.+. | +||.+.. .+.+|..+.+...... .-....+++|+++|++|. |++|.+++++.
T Consensus 3 ~~~~~~~l~~~~f~--~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------- 71 (218)
T PRK12274 3 PPAVNEPLKSDTFG--RILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------- 71 (218)
T ss_pred CcccceeecCCCcc--eEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-------
Confidence 455667788887 8 8997665 6888888887654221 111236889999999996 58899998851
Q ss_pred CCcccEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccccc-CCCCeEEcCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dL-kp~NI~v~~~g~~KL~d 172 (778)
..|++|||+ + +|...+.. + . ...+.|++.+|.+||. .+++|||| ||+||+++.+|.++|+|
T Consensus 72 -----~~~lvmeyI~G~~L~~~~~~----~---~---~~~~~qi~~~L~~lH~-~GIvHrDL~kp~NILv~~~g~i~LID 135 (218)
T PRK12274 72 -----GRHLDRSYLAGAAMYQRPPR----G---D---LAYFRAARRLLQQLHR-CGVAHNDLAKEANWLVQEDGSPAVID 135 (218)
T ss_pred -----CEEEEEeeecCccHHhhhhh----h---h---HHHHHHHHHHHHHHHH-CcCccCCCCCcceEEEcCCCCEEEEE
Confidence 369999998 3 56543321 0 1 1237899999999995 99999999 79999999999999999
Q ss_pred cccccccCCCCCC------CC-CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC
Q 004025 173 FDVLSEFDGNNEA------AN-GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (778)
Q Consensus 173 Fgla~~~~~~~~~------~~-~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~ 241 (778)
||++......... .+ ..+..+-....+.|+.|+...-- ....-...+.++.|+-+|.+++++.++
T Consensus 136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l----~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL----KRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh----ccchhHHHHHHHhcchHHHHHhccCCc
Confidence 9999865542210 00 00011111123466777654321 111114678999999999999988654
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.51 E-value=1.3e-14 Score=147.09 Aligned_cols=229 Identities=14% Similarity=0.160 Sum_probs=156.3
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
..+..++.... | .+|+|++. |..+.+|++....-.......+..|+-.|+...||||+.+++.+.. +
T Consensus 192 lnl~tkl~e~hsg--elwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns--------p 259 (448)
T KOG0195|consen 192 LNLITKLAESHSG--ELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS--------P 259 (448)
T ss_pred hhhhhhhccCCCc--cccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC--------C
Confidence 34445555544 6 78889885 5566778877654444455668889999999999999999999976 4
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccc-ccCCCCeEEcCCCcEEEE--ecc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG-NVCLSSVVVTQTLDWKLH--AFD 174 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~-dLkp~NI~v~~~g~~KL~--dFg 174 (778)
..+.+++.|+ ++|+.+|.+....-..... -......|++|+.|||+-..++-+ -|+...|+|+++-.-+|. |--
T Consensus 260 pnlv~isq~mp~gslynvlhe~t~vvvd~sq-av~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~k 338 (448)
T KOG0195|consen 260 PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQ-AVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTK 338 (448)
T ss_pred CCceEeeeeccchHHHHHHhcCccEEEecch-HHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccce
Confidence 5899999998 7899999875421111111 123378999999999984455544 688899999988766553 211
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++ +.. ......+.||+||.+...-. ...-.++|||||++++||+-+...||..-...+
T Consensus 339 fs--fqe-----------~gr~y~pawmspealqrkpe---d~n~raadmwsfaillwel~trevpfadlspmecgmkia 402 (448)
T KOG0195|consen 339 FS--FQE-----------VGRAYSPAWMSPEALQRKPE---DLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA 402 (448)
T ss_pred ee--eec-----------cccccCcccCCHHHHhcCch---hcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh
Confidence 11 111 11122357899998765321 223458999999999999999988875321111
Q ss_pred ----cCCCCcchH----HHHHHHhccCCCCCCChHHHH
Q 004025 249 ----TASIPKSLL----PDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 249 ----~~~iP~~L~----~~i~~lL~~dP~~Rps~~~lL 278 (778)
...||+.+. .++.-|++.||.+||.++.++
T Consensus 403 leglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 403 LEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred hccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 245666554 556668889999999987654
No 424
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.51 E-value=7.5e-15 Score=162.05 Aligned_cols=168 Identities=18% Similarity=0.222 Sum_probs=122.9
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++||.|+.| ..|.++|...........-..+..+.|++.|+.| .+.+|+|+||.|||...++.+||+|||+.+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh----ccchhhhccccccccccchhhhhhhhhhee
Confidence 3799999999 4799999866554443344455569999999999 689999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC-CCCCC-hhhhhc--cCCCC
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSK-TEELRN--TASIP 253 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~-~~~l~~--~~~iP 253 (778)
............-.+..++++..||+||.+.+ ..|..++|||+||+|++|++.- ...+. ...+.. -..||
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g------~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRG------QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIP 478 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhh------hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCC
Confidence 88765411111112345677779999999998 4788999999999999999971 11111 111111 13456
Q ss_pred cc-------hHHHHHHHhccCCCCCCChHHH
Q 004025 254 KS-------LLPDYQRLLSSMPSRRLNSSKL 277 (778)
Q Consensus 254 ~~-------L~~~i~~lL~~dP~~Rps~~~l 277 (778)
+. -..++..|+.+.|.+||++.+.
T Consensus 479 ~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 479 PEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 32 2356889999999999955443
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.51 E-value=3.6e-14 Score=148.17 Aligned_cols=145 Identities=12% Similarity=0.009 Sum_probs=104.8
Q ss_pred CceeccCCCCCC-CceEEEEeE-ECCCCCcEEEEEEeCCCCch----------------------hHHHHHHHHHHHHhc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGT-SKDDGSPVSIFSISGTNAQD----------------------GHLAAARNGVKRLRT 75 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~-~k~~g~~VaIK~~~~~~~~~----------------------~~~~~~~~ev~~Lk~ 75 (778)
-|.|.+.+|.|+ | .||.|+ +..+|+.|+||++....... .....+++|++.++.
T Consensus 29 ~~~i~~~Lg~G~~g--~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 29 LSAIGGCISTGKEA--NVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred hHHhCCeeccCcce--eEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 389999999998 8 899999 77789999999998542110 012346789999999
Q ss_pred CCCCCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC-ccc
Q 004025 76 VRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-LVH 152 (778)
Q Consensus 76 LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-ivH 152 (778)
|.+. ++.+...+... ..||||||+. +|...+..... .....+..++.||+.+|.+||. .+ ++|
T Consensus 107 L~~~-~i~~p~~~~~~---------~~~lV~E~~~g~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~g~iiH 172 (237)
T smart00090 107 LYEA-GVPVPKPIAWR---------RNVLVMEFIGGDGLPAPRLKDVE---PEEEEEFELYDDILEEMRKLYK-EGELVH 172 (237)
T ss_pred HHhc-CCCCCeeeEec---------CceEEEEEecCCcccccccccCC---cchHHHHHHHHHHHHHHHHHHh-cCCEEe
Confidence 9763 33333333321 2489999994 35443322111 1122234558999999999995 88 999
Q ss_pred cccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 153 ~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+||+++ ++.++|+|||.+.....
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 99999999999 88999999999876543
No 426
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.45 E-value=3e-13 Score=151.96 Aligned_cols=194 Identities=17% Similarity=0.225 Sum_probs=141.2
Q ss_pred HhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 73 LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 73 Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
|+.+.|.|+.+|++.+... ..+++|.+|| ++|.+.+........ .......++.|+.||.|||+..-.
T Consensus 1 l~~l~h~n~~~f~g~~~~~--------~~~~~i~~~c~rGsl~D~i~~~~~~~d--~~F~~s~~rdi~~Gl~ylh~s~i~ 70 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--------PEMIVIWEYCSRGSLLDILSNEDIKLD--YFFILSFIRDISKGLAYLHNSPIG 70 (484)
T ss_pred CcccchhhhhhheeeEecC--------CceEEEEeeecCccHHhHHhccccCcc--HHHHHHHHHHHHHHHHHHhcCcce
Confidence 5788999999999999874 3899999999 789999987443211 122334489999999999975444
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCcccccccc-ccccCCCCCcchhHHHHH
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW-TAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~-~~~~~~~~~~~DiwSLG~ 229 (778)
.||+++..|.+++....+||.|||+......... ............|.|||++.+.- .......+.+.|+||||+
T Consensus 71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~i 146 (484)
T KOG1023|consen 71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAE----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGI 146 (484)
T ss_pred eeeeeccccceeeeeEEEEechhhhccccccccc----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHH
Confidence 9999999999999999999999999877643110 00011111223789999988631 111123567899999999
Q ss_pred HHHHHHhCCCCCChhh-----------hhc------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFSGMRLSKTEE-----------LRN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~tg~~p~~~~~-----------l~~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++||+++...+|.... ++. ...++..+..++++|+..+|..||++.++-..
T Consensus 147 i~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~ 220 (484)
T KOG1023|consen 147 IMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSK 220 (484)
T ss_pred HHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhh
Confidence 9999999887774311 011 11455568888999999999999999887544
No 427
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.43 E-value=1.2e-13 Score=162.08 Aligned_cols=200 Identities=19% Similarity=0.248 Sum_probs=138.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|+..+.+..|. | .||..+++.+.+++++ .+++.+. .++| |+.+.+.
T Consensus 82 e~df~~IklisngAyg--avylvrh~~trqrfa~-kiNkq~l------ilRn------------ilt~a~n--------- 131 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYG--AVYLVRHKETRQRFAM-KINKQNL------ILRN------------ILTFAGN--------- 131 (1205)
T ss_pred ccccceeEeeccCCCC--ceeeeeccccccchhh-cccccch------hhhc------------cccccCC---------
Confidence 35788888888888 8 8999999999999999 5444211 1222 3333221
Q ss_pred CcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 97 ~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
-+.| ++-...++..+... .+++.|++|||+ .+|+|||+||+|.+|+.-|.+||.|||+.
T Consensus 132 -----pfvv----gDc~tllk~~g~lP-----------vdmvla~Eylh~-ygivhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 132 -----PFVV----GDCATLLKNIGPLP-----------VDMVLAVEYLHS-YGIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred -----ccee----chhhhhcccCCCCc-----------chhhHHhHhhcc-CCeecCCCCCCcceeeecccccccchhhh
Confidence 1222 33334444332211 123789999996 99999999999999999999999999997
Q ss_pred cccCCCCC--CCCC-------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh
Q 004025 177 SEFDGNNE--AANG-------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (778)
Q Consensus 177 ~~~~~~~~--~~~~-------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~ 247 (778)
...-.... ...+ .+....-++++.|.|||++.- ++|...+|+|+||+++||.+-|..+|..+...
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr------qgygkpvdwwamGiIlyeFLVgcvpffGdtpe 264 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 264 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh------hccCCCccHHHHHHHHHHHheeeeeccCCCHH
Confidence 54321100 0000 111112245568999999865 57889999999999999999998877654211
Q ss_pred ---------------ccCCCCcchHHHHHHHhccCCCCCCCh
Q 004025 248 ---------------NTASIPKSLLPDYQRLLSSMPSRRLNS 274 (778)
Q Consensus 248 ---------------~~~~iP~~L~~~i~~lL~~dP~~Rps~ 274 (778)
....+|.+...++.+||..+|..|.-.
T Consensus 265 elfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 265 ELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred HHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhccc
Confidence 124678889999999999999999754
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.42 E-value=8.8e-13 Score=133.79 Aligned_cols=137 Identities=12% Similarity=0.074 Sum_probs=102.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--------------------hHHHHHHHHHHHHhcCCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--------------------GHLAAARNGVKRLRTVRH 78 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~--------------------~~~~~~~~ev~~Lk~LrH 78 (778)
-|.+.+.|+.|. | .||+|..+ +|+.|+||++....... .....+.+|+..+..+.|
T Consensus 16 ~~~~~~~i~~G~~g--~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 16 VESLGNQIGVGKES--DVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred hhhcCCccccCcce--EEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 388999999998 7 89999875 79999999987532110 011236788999999988
Q ss_pred CC--eeeEeeeeEecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 79 PN--ILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 79 Pn--Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
++ +..+++. ...|+||||+. +|...... .. ....+.+|+.++.++|+ .+++|||
T Consensus 93 ~~i~v~~~~~~------------~~~~lv~e~~~g~~L~~~~~~-----~~----~~~~~~~i~~~l~~lh~-~gi~H~D 150 (198)
T cd05144 93 EGFPVPKPIDW------------NRHAVVMEYIDGVELYRVRVL-----ED----PEEVLDEILEEIVKAYK-HGIIHGD 150 (198)
T ss_pred cCCCCCceeec------------CCceEEEEEeCCcchhhcccc-----cc----HHHHHHHHHHHHHHHHH-CCCCcCC
Confidence 75 3333331 14589999993 56544321 11 22348899999999996 8999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCC
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|+|+||++++++.++|+|||++.....
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccCCC
Confidence 999999999999999999999976654
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.42 E-value=1.5e-12 Score=132.96 Aligned_cols=133 Identities=15% Similarity=0.093 Sum_probs=102.6
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+.||.|. | .||+|.. +|..|+||+........ .....+.+|++.++.++|++|......+...
T Consensus 2 ~~l~~G~~~--~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~------ 71 (211)
T PRK14879 2 KLIKRGAEA--EIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP------ 71 (211)
T ss_pred cccccCceE--EEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC------
Confidence 4678887 7 8999987 68889999876432211 1234578899999999999876655554432
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+||||+ .+|.+++..... .....+.+|+.+|.+||+ .+++|||++|.||+++ ++.++|+|||+
T Consensus 72 --~~~~lv~e~~~G~~L~~~~~~~~~-------~~~~i~~~i~~~l~~lH~-~~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 72 --ENFIIVMEYIEGEPLKDLINSNGM-------EELELSREIGRLVGKLHS-AGIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred --CCCEEEEEEeCCcCHHHHHHhccH-------HHHHHHHHHHHHHHHHHh-CCcccCCCCcccEEEE-CCCEEEEECCc
Confidence 2578999999 378888765321 234558999999999995 9999999999999999 88999999998
Q ss_pred ccc
Q 004025 176 LSE 178 (778)
Q Consensus 176 a~~ 178 (778)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 765
No 430
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=1e-12 Score=157.12 Aligned_cols=196 Identities=15% Similarity=0.170 Sum_probs=142.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh-HHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG-HLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~-~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
-+..|.|.+.+|.|+ | +||.|+... |+.||+|+=.-.+..+- +...++ .+||-.--|.|..+...+.-.+
T Consensus 696 ~~~~~~I~~e~G~g~y~--~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~---~RLk~~~~~~~~~~~~a~~~~~-- 767 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYG--SVYVATHSN-GKLVALKVEKPPNPWEFYICLQVM---ERLKPQMLPSIMHISSAHVFQN-- 767 (974)
T ss_pred cceeEEEEeeeccccce--EEEEeecCC-CcEEEEEeecCCCceeeeehHHHH---HhhchhhhcchHHHHHHHccCC--
Confidence 345799999999998 8 999999886 99999999765554442 222222 2233111567777776665432
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-------C
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-------T 165 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-------~ 165 (778)
.-++|+||. |.|.+++...+. .....+..+..|++.-+..|| .++||||||||+|.++.. .
T Consensus 768 ------~S~lv~ey~~~Gtlld~~N~~~~---m~e~lv~~~~~qml~ive~lH-~~~IIHgDiKPDNfll~~~~~~~~~~ 837 (974)
T KOG1166|consen 768 ------ASVLVSEYSPYGTLLDLINTNKV---MDEYLVMFFSCQMLRIVEHLH-AMGIIHGDIKPDNFLLRREICADSDS 837 (974)
T ss_pred ------cceeeeeccccccHHHhhccCCC---CCchhhhHHHHHHHHHHHHHH-hcceecccCCcceeEeecccCCCCcc
Confidence 458999998 899999884332 223345566999999999999 599999999999999953 2
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
--++|+|||.+-.+.-..+. ..-.....+..+..+|+..| +..++.+|.|+|+.+||-|+.|+..
T Consensus 838 ~~l~lIDfG~siDm~lfp~~----~~F~~~~~td~f~C~EM~~g------rpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 838 KGLYLIDFGRSIDMKLFPDG----TKFKAVWHTDLFDCIEMREG------RPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cceEEEecccceeeeEcCCC----cEEeeeeccccchhHHHhcC------CCCchhhhhHHHHHHHHHHHHHHHH
Confidence 34899999998776543211 11112234458899999888 5788999999999999999998743
No 431
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.38 E-value=2.3e-12 Score=130.35 Aligned_cols=129 Identities=19% Similarity=0.130 Sum_probs=96.5
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
||.|. | +||+|.. +|..|+||.+....... ...+.+.+|++.++.++|+++....-.+..+
T Consensus 2 ig~G~~~--~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-------- 69 (199)
T TIGR03724 2 IAKGAEA--IIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-------- 69 (199)
T ss_pred CCCCceE--EEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--------
Confidence 56776 6 9999984 67899999976532211 1235678999999999988644332222222
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+||||+ ++|.+.+..... ..+.|++.+|.+||+ .+++|||++|.||+++ ++.++|.|||++.
T Consensus 70 ~~~~lv~e~~~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~-~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 70 DNKTIVMEYIEGKPLKDVIEEGND----------ELLREIGRLVGKLHK-AGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CCCEEEEEEECCccHHHHHhhcHH----------HHHHHHHHHHHHHHH-CCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 2568999999 468777654221 338999999999995 9999999999999999 8999999999876
Q ss_pred cc
Q 004025 178 EF 179 (778)
Q Consensus 178 ~~ 179 (778)
..
T Consensus 138 ~~ 139 (199)
T TIGR03724 138 YS 139 (199)
T ss_pred CC
Confidence 53
No 432
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.33 E-value=7.4e-12 Score=146.26 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=102.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.|...+.||.|. | +||+|... +..+++|+...+... ....+.+.+|++.++.++|++|+..+.....+
T Consensus 334 ~~~~~~~iG~G~~g--~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~- 408 (535)
T PRK09605 334 RKIPDHLIGKGAEA--DIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP- 408 (535)
T ss_pred ccCccceeccCCcE--EEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC-
Confidence 345567789988 7 89999874 444555544322111 12345688999999999999988766555442
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...|+||||+ ++|.+++.. ....+.||+.+|.+||+ .+++||||||+||++ .++.++|
T Consensus 409 -------~~~~lv~E~~~g~~L~~~l~~-----------~~~~~~~i~~~L~~lH~-~giiHrDlkp~NILl-~~~~~~l 468 (535)
T PRK09605 409 -------EEKTIVMEYIGGKDLKDVLEG-----------NPELVRKVGEIVAKLHK-AGIVHGDLTTSNFIV-RDDRLYL 468 (535)
T ss_pred -------CCCEEEEEecCCCcHHHHHHH-----------HHHHHHHHHHHHHHHHh-CCCccCCCChHHEEE-ECCcEEE
Confidence 2568999999 478887752 12348899999999995 999999999999999 6789999
Q ss_pred EecccccccC
Q 004025 171 HAFDVLSEFD 180 (778)
Q Consensus 171 ~dFgla~~~~ 180 (778)
+|||+++...
T Consensus 469 iDFGla~~~~ 478 (535)
T PRK09605 469 IDFGLGKYSD 478 (535)
T ss_pred EeCcccccCC
Confidence 9999987643
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.31 E-value=8.9e-12 Score=124.73 Aligned_cols=138 Identities=17% Similarity=0.182 Sum_probs=94.6
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhH-H---------------------HHHHHHHHHHhcCCCC
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGH-L---------------------AAARNGVKRLRTVRHP 79 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~-~---------------------~~~~~ev~~Lk~LrHP 79 (778)
+++.||.|+ | +||.|++. +|+.|+||++......... . .....|.+.+..+++.
T Consensus 1 ~~~~lg~G~~g--~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 77 (187)
T cd05119 1 VGGPIGTGKEA--DVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA 77 (187)
T ss_pred CCcccccccce--eEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence 356788888 8 89999987 8999999998754221111 1 1124566667776544
Q ss_pred C--eeeEeeeeEecccccCCcccEEEEEecCCcC--h-HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 80 N--ILAFLHSTEVENIDATSTKITIYIVTEPVMP--L-SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 80 n--Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~~--L-~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
+ +.+++... ..++||||+.. + ...+...... .....++.|++.++.++|...+++|+|
T Consensus 78 ~~~~~~~~~~~------------~~~lv~e~~~g~~~~~~~l~~~~~~-----~~~~~~~~~~~~~l~~lh~~~~ivH~D 140 (187)
T cd05119 78 GVPVPKPIDLN------------RHVLVMEFIGGDGIPAPRLKDVRLL-----EDPEELYDQILELMRKLYREAGLVHGD 140 (187)
T ss_pred CCCCCceEecC------------CCEEEEEEeCCCCccChhhhhhhhc-----ccHHHHHHHHHHHHHHHhhccCcCcCC
Confidence 3 33444321 35899999932 1 1222222111 223445899999999999548999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCC
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|+|+||+++ ++.++|+|||.+.....
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccccC
Confidence 999999999 89999999999987654
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.29 E-value=2e-11 Score=127.71 Aligned_cols=130 Identities=12% Similarity=0.070 Sum_probs=94.1
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC-----c------hhHHHHHHHHHHHHhcCCCCCe--eeEeeeeEecccccCCcccE
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNA-----Q------DGHLAAARNGVKRLRTVRHPNI--LAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~-----~------~~~~~~~~~ev~~Lk~LrHPnI--lk~~d~~e~e~~~g~~~~~~ 101 (778)
++|.+.. .+..++||.+..... . ......+.+|++.++.|+|++| .+.+...+.+... ...
T Consensus 47 tv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~----~~~ 120 (239)
T PRK01723 47 TTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL----FYR 120 (239)
T ss_pred cEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc----cee
Confidence 6666655 378899999864221 1 1223567899999999999885 6666665443210 123
Q ss_pred EEEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 102 IYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 102 lyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.+||||++. +|.+++..... ... . +.||+.+|.+||. ++|+|+||||.||+++.++.++|+|||.++.
T Consensus 121 ~~lV~e~l~G~~~L~~~l~~~~l----~~~-~---~~~i~~~l~~lH~-~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 121 ADILIERIEGARDLVALLQEAPL----SEE-Q---WQAIGQLIARFHD-AGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred eeEEEEecCCCCCHHHHHhcCCC----CHH-H---HHHHHHHHHHHHH-CCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 469999993 58877765321 122 2 6799999999995 9999999999999999999999999998765
Q ss_pred c
Q 004025 179 F 179 (778)
Q Consensus 179 ~ 179 (778)
.
T Consensus 192 ~ 192 (239)
T PRK01723 192 R 192 (239)
T ss_pred C
Confidence 3
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=1.7e-11 Score=138.17 Aligned_cols=243 Identities=18% Similarity=0.121 Sum_probs=171.3
Q ss_pred CCceeccCCCC--CCCceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPS--AWGSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~--g~g~w~Vy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
..+.+...+|. |. -|.+|.++. +.++..+++|.=+...........=.+|+...++++ |+|.++.+..++..
T Consensus 114 ~~~~~~~~~g~~~g~-~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~-- 190 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGS-KGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS-- 190 (524)
T ss_pred hhcccccccccCCCC-CceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC--
Confidence 34556667777 54 238999999 899999999985433222111222345666677776 99999988888863
Q ss_pred ccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHH----HHHHHHcCCCccccccCCCCeEEcCC-Cc
Q 004025 94 DATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAK----AVSFLNNDCKLVHGNVCLSSVVVTQT-LD 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~----aL~fLH~~~~ivH~dLkp~NI~v~~~-g~ 167 (778)
..+||-||+|+ .|..+....... .....++-.+.+... ||..+|+ ++++|.|++|.||+...+ ..
T Consensus 191 ------~~lfiqtE~~~~sl~~~~~~~~~~--~p~~~l~~~~~~~~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 191 ------GILFIQTELCGESLQSYCHTPCNF--LPDNLLWNSLRDWLSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred ------CcceeeeccccchhHHhhhccccc--CCchhhhhHHhhhhhcccccccccCC-Ccccccccchhheecccccce
Confidence 48999999996 476666554321 112223334677777 9999996 999999999999999998 89
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh----
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT---- 243 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~---- 243 (778)
.+++||+++..+.+.+....... .+...++..|++||+.++ .+..+.|+|+||.++.+...+..+...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~-~~r~~~~~~Y~~ke~~~~-------l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~ 333 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKV-SKRPEGDCIYAAKELLNG-------LATFASDIFSLGEVILEAILGSHLPSVGKNS 333 (524)
T ss_pred eecCCcceeEEccCCccccceee-eecCCCCceEeChhhhcc-------ccchHhhhcchhhhhHhhHhhcccccCCCCC
Confidence 99999999999877542221111 122245568999999886 466789999999999999887544321
Q ss_pred --hhhhccC-------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 244 --EELRNTA-------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 244 --~~l~~~~-------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.++++.+ .....+...+..|+..++..|++.+.+..+.
T Consensus 334 ~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~ 380 (524)
T KOG0601|consen 334 SWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALN 380 (524)
T ss_pred CccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccc
Confidence 1223222 2233455567889999999999998888775
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.18 E-value=1.1e-10 Score=110.79 Aligned_cols=130 Identities=15% Similarity=0.061 Sum_probs=98.4
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC--CCeeeEeeeeEecccccCCcc
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH--PNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH--PnIlk~~d~~e~e~~~g~~~~ 99 (778)
+.+.++.|. + .||+++.. +..++||.+..... ...+.+|+..++.|+| +++.+++...+..
T Consensus 2 ~~~~i~~g~~~--~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-------- 65 (155)
T cd05120 2 SIKLLKGGLTN--RVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESD-------- 65 (155)
T ss_pred cceeccccccc--ceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--------
Confidence 345677776 6 89999975 37899999865432 3457889999999976 5888888877653
Q ss_pred cEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcC--CCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 100 ITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 100 ~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+++||+. ++..+ ........+.+++.+|.+||.- .+++|||++|+||+++..+.++|.|||.
T Consensus 66 ~~~~~v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~ 135 (155)
T cd05120 66 GWSYLLMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEY 135 (155)
T ss_pred CccEEEEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccc
Confidence 37899999983 34322 1112233488999999999952 2699999999999999999999999998
Q ss_pred ccc
Q 004025 176 LSE 178 (778)
Q Consensus 176 a~~ 178 (778)
+..
T Consensus 136 ~~~ 138 (155)
T cd05120 136 AGY 138 (155)
T ss_pred ccC
Confidence 764
No 437
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=7.9e-12 Score=146.47 Aligned_cols=246 Identities=15% Similarity=0.166 Sum_probs=172.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
+..+|.+.+.+|.|. + .+-..... .....++++.+..........+.+..|..+-+.+. |+|++.+++....
T Consensus 18 ~~~~~~~~~~ig~gs~~--~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--- 92 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFS--SSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--- 92 (601)
T ss_pred ccccccccccccccccc--hhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC---
Confidence 367899999999887 5 44444432 23445666655544323344556677887777887 9999999998876
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKL 170 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL 170 (778)
+...++++||. +.+...+........ ........+.|+..+|.|+|..+++.|+||+|+|.+++.+| ..|+
T Consensus 93 -----~~~~~~~~~~s~g~~~f~~i~~~~~~~~-~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~ 166 (601)
T KOG0590|consen 93 -----PRSYLLSLSYSDGGSLFSKISHPDSTGT-SSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKI 166 (601)
T ss_pred -----CcccccccCcccccccccccccCCccCC-CCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccC
Confidence 45889999997 346655521111011 11112334999999999999438999999999999999999 9999
Q ss_pred EecccccccCCCCCCCCCCcccccccc-CCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLV-GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~-~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--- 246 (778)
.|||+++.+...+.. ........+ ...|++||...+. .......|+||.|+++..++.|..+......
T Consensus 167 ~df~~At~~~~~~g~---~~~~~~~~g~s~~y~a~E~~~~~-----~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~ 238 (601)
T KOG0590|consen 167 ADFGLATAYRNKNGA---ERSLKDRCGSSPPYGAPEHLSGK-----AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG 238 (601)
T ss_pred CCchhhccccccCCc---ceeeecccCCCCCCCCcccccch-----hhcCCCcccccccccccccccCCCCccccccccc
Confidence 999999988662111 111222344 5689999998762 2345689999999999999999866532111
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+.......+.+++..+|..|.+..++-.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~ 287 (601)
T KOG0590|consen 239 RYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDN 287 (601)
T ss_pred cceeecccccccccCccccCChhhhhcccccccCCchhccccccccccc
Confidence 11234566677778889999999999999988877
No 438
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.99 E-value=6.9e-11 Score=123.57 Aligned_cols=201 Identities=16% Similarity=0.184 Sum_probs=131.1
Q ss_pred HHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCC-cchHHHHHHHHHHHHHHH
Q 004025 66 ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS-QRDEYYAWGLNQIAKAVS 142 (778)
Q Consensus 66 ~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~-~~~~~i~~gl~QI~~aL~ 142 (778)
.+.-+..|-++-|-||++++.++.+.... ....+.++|||+ ++|..+|++...... ......+.++-||+.||.
T Consensus 114 ~~~vFdnllqlvHsnlvkfH~yw~d~K~~---e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~ 190 (458)
T KOG1266|consen 114 RRAVFDNLLQLVHSNLVKFHKYWTDKKYE---EKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALS 190 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccc---cccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Confidence 34445677788899999999988754321 145788999999 679999987543222 112223445999999999
Q ss_pred HHHcCC--CccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccc---cccCCCCCCccccccccccccCC
Q 004025 143 FLNNDC--KLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA---WLVGAQYKPVELAKSDWTAVRKS 217 (778)
Q Consensus 143 fLH~~~--~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~---~~~~~~Y~aPE~~~~~~~~~~~~ 217 (778)
|||+ | .++|+|+..+.||+..+|-+|++--.........+ ...... ...-+.|.+||.-.- ..
T Consensus 191 yLhs-~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~-----~~~~~Ek~~~~~~~g~~a~~sg~~------tn 258 (458)
T KOG1266|consen 191 YLHS-CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVN-----STREAEKSVNTSLPGFSAPESGTT------TN 258 (458)
T ss_pred hhhc-cCCccccCCcchhheeecCCceEEecccCccccchhhh-----hhhHhhhhccccCCccccCCcCcc------cc
Confidence 9997 5 69999999999999999999986322211110000 000000 111236788887443 24
Q ss_pred CCCcchhHHHHHHHHHHHhCCCC-CChh-------hhhc-cCCCCcch-HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 218 PPWSIDSWGLGCLIYELFSGMRL-SKTE-------ELRN-TASIPKSL-LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 218 ~~~~~DiwSLG~liyel~tg~~p-~~~~-------~l~~-~~~iP~~L-~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+.++|||+||+...||--+..- .+.+ ...+ +..+...+ +..+.+|++..|..||++..++-|+
T Consensus 259 ~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 259 TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 55689999999888888776432 1111 0000 11122222 3457889999999999999999998
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.97 E-value=3.1e-09 Score=107.31 Aligned_cols=138 Identities=12% Similarity=0.071 Sum_probs=93.4
Q ss_pred ccCCCCCC-CceEEEEeEECC------CCCcEEEEEEeCCCC-----------c---------hhHHHH----HHHHHHH
Q 004025 24 GDPYPSAW-GSWSHFQGTSKD------DGSPVSIFSISGTNA-----------Q---------DGHLAA----ARNGVKR 72 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~------~g~~VaIK~~~~~~~-----------~---------~~~~~~----~~~ev~~ 72 (778)
...|+.|- + .||.|.... .+..||||++..... . ...... +++|++.
T Consensus 2 ~g~i~~GKEa--~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~ 79 (197)
T cd05146 2 NGCISTGKES--VVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHN 79 (197)
T ss_pred CCccccCcce--EEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHH
Confidence 34667776 6 899998653 357999999973210 0 011223 4599999
Q ss_pred HhcCCC--CCeeeEeeeeEecccccCCcccEEEEEecCCcC--h-HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHH-Hc
Q 004025 73 LRTVRH--PNILAFLHSTEVENIDATSTKITIYIVTEPVMP--L-SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFL-NN 146 (778)
Q Consensus 73 Lk~LrH--PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~~--L-~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fL-H~ 146 (778)
|++|+. -++.+.++.. .-+|||||++. + ...++..... .+.+...+.|++.+|..| |
T Consensus 80 L~rl~~~Gv~vP~pi~~~------------~~~lvME~Ig~~~~~~~~Lkd~~~~----~~~~~~i~~~i~~~l~~l~H- 142 (197)
T cd05146 80 LKRMQKAGIPCPEVVVLK------------KHVLVMSFIGDDQVPAPKLKDAKLN----DEEMKNAYYQVLSMMKQLYK- 142 (197)
T ss_pred HHHHHHcCCCCCeEEEec------------CCEEEEEEcCCCCccchhhhccccC----HHHHHHHHHHHHHHHHHHHH-
Confidence 999863 3455666542 24899999953 2 1223332211 122334478999999998 7
Q ss_pred CCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 147 DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 147 ~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
++++|||||++.||++. +|.+.|+|||.+.....
T Consensus 143 ~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 143 ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred hCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 59999999999999996 57899999998877653
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.87 E-value=2.5e-09 Score=123.38 Aligned_cols=143 Identities=13% Similarity=0.162 Sum_probs=90.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----------------------------h----hHHHH--
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----------------------------D----GHLAA-- 65 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~----------------------------~----~~~~~-- 65 (778)
|+. +.+++|+ | .||.|+.+++|+.|+||+....-.. . +..+.
T Consensus 122 fd~-~PlasaSia--QVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 122 FDI-KPLASASIA--QVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred cCh-hhhcCCCcc--EEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 555 6788888 8 9999999988999999999743100 0 11111
Q ss_pred ----HHHHHHHHhcCC----CCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHH--HHHhCcCCC-cchHHHHH
Q 004025 66 ----ARNGVKRLRTVR----HPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEK--IKELGLEGS-QRDEYYAW 132 (778)
Q Consensus 66 ----~~~ev~~Lk~Lr----HPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~--L~~~~~~~~-~~~~~i~~ 132 (778)
+.+|...+.+++ +.+.+.+-+++.+-. +..+|||||| .+|.++ +...+.... .....+..
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s-------t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC-------SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEV 271 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccC-------CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence 233444444443 555555555554321 2568999999 467653 333221110 11112333
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC----cEEEEecccccccCC
Q 004025 133 GLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----DWKLHAFDVLSEFDG 181 (778)
Q Consensus 133 gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g----~~KL~dFgla~~~~~ 181 (778)
++.||+. .|++|+|++|.||+|+.+| .+++.|||++..+..
T Consensus 272 ~~~Qif~--------~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 272 FFTQVFR--------DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHh--------CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3445442 6899999999999999988 999999999887743
No 441
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.86 E-value=1.1e-08 Score=116.24 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=89.9
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--h------------------------------HHH------
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--G------------------------------HLA------ 64 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~--~------------------------------~~~------ 64 (778)
.+.++.|+ | .||+|+.+ +|+.|+||+........ . ...
T Consensus 122 ~~plasaSig--QVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 198 (437)
T TIGR01982 122 EKPLAAASIA--QVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL 198 (437)
T ss_pred Ccceeeeehh--heEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence 35688887 8 99999976 79999999986431110 0 000
Q ss_pred HHHHHHHHHhcC----CCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHH
Q 004025 65 AARNGVKRLRTV----RHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIA 138 (778)
Q Consensus 65 ~~~~ev~~Lk~L----rHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~ 138 (778)
.+.+|.+.+.++ +|.+-+.+-..+.... ..-+|||||+ .+|.+........ ..... + ..+++
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~-i---a~~~~ 266 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYWDRT-------SERVLTMEWIDGIPLSDIAALDEAG-LDRKA-L---AENLA 266 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc-------CCceEEEEeECCcccccHHHHHhcC-CCHHH-H---HHHHH
Confidence 133444444444 3444445444443221 2469999999 3677665432111 11111 2 34444
Q ss_pred H-HHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 139 K-AVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 139 ~-aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
. .+..+|. .+++|+|++|.||+++.+|.++|+|||++..+.
T Consensus 267 ~~~l~ql~~-~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 267 RSFLNQVLR-DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHh-CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 4 4677885 899999999999999999999999999987764
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.81 E-value=1.4e-08 Score=99.61 Aligned_cols=123 Identities=13% Similarity=0.105 Sum_probs=85.0
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe-eeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI-LAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnI-lk~~d~~e~e~~~g~~~~~~ly 103 (778)
.++.|. + .||.++.. +..|+||+....... .....+|++.++.+.+.++ .+++..... .-+
T Consensus 5 ~l~~G~~~--~vy~~~~~--~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~~~----------~~~ 67 (170)
T cd05151 5 PLKGGMTN--KNYRVEVA--NKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFDPE----------TGV 67 (170)
T ss_pred ecCCcccC--ceEEEEEC--CeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEeCC----------CCe
Confidence 455555 5 78988864 788999997643211 1235688888988865554 344443321 247
Q ss_pred EEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC-----ccccccCCCCeEEcCCCcEEEEecccc
Q 004025 104 IVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-----LVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 104 IVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-----ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+|||++. ++... . ..... .+.+++++|..||. .+ ++|||++|.||+++ ++.++|+|||.+
T Consensus 68 lv~e~i~G~~l~~~----~---~~~~~----~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a 134 (170)
T cd05151 68 LITEFIEGSELLTE----D---FSDPE----NLEKIAKLLKKLHS-SPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYA 134 (170)
T ss_pred EEEEecCCCccccc----c---ccCHH----HHHHHHHHHHHHhC-CCCCCceeecCCCCcCcEEEE-CCeEEEEecccc
Confidence 9999994 34321 0 01112 27899999999996 66 49999999999999 678999999987
Q ss_pred cc
Q 004025 177 SE 178 (778)
Q Consensus 177 ~~ 178 (778)
..
T Consensus 135 ~~ 136 (170)
T cd05151 135 GM 136 (170)
T ss_pred cC
Confidence 64
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.77 E-value=4.7e-09 Score=118.59 Aligned_cols=239 Identities=16% Similarity=0.081 Sum_probs=155.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
+.-+|.....++.+. + .+++...+ .++..|++|.................|+-..-.|. |.+++.++..+...
T Consensus 263 ~~~df~~v~~i~~~~~~--~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-- 338 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFS--SVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-- 338 (524)
T ss_pred ecCCcceeEEccCCccc--cceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc--
Confidence 344677777888776 5 56666655 67888988887654333322223345555555554 88888888888753
Q ss_pred ccCCcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcEEEEe
Q 004025 94 DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~KL~d 172 (778)
...||--|||.+...-+...-.. ...+..+.....|++.++.|+|+ ..++|+|++|+||++..+ +.-+++|
T Consensus 339 ------r~~~ip~e~~~~~s~~l~~~~~~-~~d~~~~~~~~~q~~~~l~~i~s-~~~~~~d~~psni~i~~~~~~~~~~~ 410 (524)
T KOG0601|consen 339 ------RQGYIPLEFCEGGSSSLRSVTSQ-MLDEDPRLRLTAQILTALNVIHS-KLFVHLDVKPSNILISNDGFFSKLGD 410 (524)
T ss_pred ------ccccCchhhhcCcchhhhhHHHH-hcCcchhhhhHHHHHhccccccc-hhhhcccccccceeeccchhhhhccc
Confidence 36789999994322111111110 11122234458999999999995 899999999999999886 7889999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCC-ccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-hhhhc--
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKP-VELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELRN-- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~a-PE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-~~l~~-- 248 (778)
|++.+.+.-. ........+|+| .|.+... ..+..+.|+|+||.-+++..++.++... .+...
T Consensus 411 ~~~~t~~~~~---------~~~~~~~~r~~p~~~~~~e~-----~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~ 476 (524)
T KOG0601|consen 411 FGCWTRLAFS---------SGVFHHIDRLYPIAEILLED-----YPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIR 476 (524)
T ss_pred ccccccccee---------cccccccccccccchhhccc-----cccccccccccccccccccccCcccCcccccceeee
Confidence 9988754321 111122335553 5554443 4566789999999999999998765432 22111
Q ss_pred ---cCCCC---cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---TASIP---KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---~~~iP---~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+..+| ..+..+.+.++..++..|+.+.++..+.
T Consensus 477 ~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 477 SGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred cccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 12223 3455667788889999999988887765
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.75 E-value=9e-08 Score=106.19 Aligned_cols=210 Identities=16% Similarity=0.180 Sum_probs=146.2
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC---cC
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV---MP 111 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v---~~ 111 (778)
+.|++..+.||..|++|.+....... ......-++..|++.|+|||++.++|.+...+ ...+++|++|. ..
T Consensus 291 Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~----D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 291 TTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFG----DLSLVLVYDYYPSSPT 364 (655)
T ss_pred eeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccC----cceEEEEEecCCCCch
Confidence 58999999999999999995322111 11122347889999999999999999865543 56899999998 35
Q ss_pred hHHHHHH-hCc----------CCCc-chHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 112 LSEKIKE-LGL----------EGSQ-RDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 112 L~~~L~~-~~~----------~~~~-~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
|.++.-. ... .+.. .+++++-++.||..||.++|+ .|+.-+-|.+.+|+|+.+-.++|.+.|+...+
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs-sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS-SGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh-cCceeecccHhHeEeeCcceEEEecccceeee
Confidence 6654322 111 1112 234555669999999999996 89999999999999999989999998887666
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-----C-Chhhhhcc-CCC
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-----S-KTEELRNT-ASI 252 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p-----~-~~~~l~~~-~~i 252 (778)
..+. . |.+.+ ..+-|.=.||.||..|.+|..- . ....++.+ ...
T Consensus 444 ~~d~---~-----------------~~le~---------~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~y 494 (655)
T KOG3741|consen 444 QEDP---T-----------------EPLES---------QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITTTY 494 (655)
T ss_pred cCCC---C-----------------cchhH---------HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhhhh
Confidence 5431 0 11111 1356889999999999998421 1 11112222 345
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 253 PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 253 P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.-+.+.++.. -++.+++.+-
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 566777777777777765 6778888764
No 445
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.60 E-value=3.3e-07 Score=92.20 Aligned_cols=127 Identities=15% Similarity=0.163 Sum_probs=79.9
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC------------------------chhHHHHHHHHHHHHhcCCCC--CeeeEeeee
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNA------------------------QDGHLAAARNGVKRLRTVRHP--NILAFLHST 88 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~------------------------~~~~~~~~~~ev~~Lk~LrHP--nIlk~~d~~ 88 (778)
.||.|... +|..|+||++..... .......+++|++.|+++..- ++.+.++..
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48889874 678999999974210 012345678999999999865 356666443
Q ss_pred EecccccCCcccEEEEEecCCc--C--hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHH-HHcCCCccccccCCCCeEEc
Q 004025 89 EVENIDATSTKITIYIVTEPVM--P--LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSF-LNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v~--~--L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~f-LH~~~~ivH~dLkp~NI~v~ 163 (778)
+ -+|||||++ . +.. |......... ....+.+++..+.. +| .++++||||++.||+++
T Consensus 80 ~------------~~ivME~I~~~G~~~~~-l~~~~~~~~~----~~~~~~~il~~~~~~~~-~~givHGDLs~~NIlv~ 141 (188)
T PF01163_consen 80 R------------NVIVMEYIGEDGVPLPR-LKDVDLSPEE----PKELLEEILEEIIKMLH-KAGIVHGDLSEYNILVD 141 (188)
T ss_dssp T------------TEEEEE--EETTEEGGC-HHHCGGGGST----HHHHHHHHHHHHHHHHH-CTTEEESS-STTSEEEE
T ss_pred C------------CEEEEEecCCCccchhh-HHhccccchh----HHHHHHHHHHHHHHHHH-hcCceecCCChhhEEee
Confidence 2 279999996 2 433 3332211111 22337788885555 56 59999999999999998
Q ss_pred CCCcEEEEecccccccCC
Q 004025 164 QTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 164 ~~g~~KL~dFgla~~~~~ 181 (778)
++ .+.++|||.+.....
T Consensus 142 ~~-~~~iIDf~qav~~~~ 158 (188)
T PF01163_consen 142 DG-KVYIIDFGQAVDSSH 158 (188)
T ss_dssp TT-CEEE--GTTEEETTS
T ss_pred cc-eEEEEecCcceecCC
Confidence 87 899999998876653
No 446
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.59 E-value=2.4e-08 Score=118.41 Aligned_cols=241 Identities=17% Similarity=0.189 Sum_probs=158.5
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+.+.+.+.++. + .++.++...+|....+++..+... .....+.++.+-.++-..+||-++.....+..
T Consensus 806 ~~i~~p~qS~sp~--ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~-------- 875 (1205)
T KOG0606|consen 806 FEITKPSQSGSPS--SSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC-------- 875 (1205)
T ss_pred ceecccccCCCCc--ccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--------
Confidence 45555555555 5 677777777776666665443211 01122333333333444456777766665332
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..-.|++++|+ ++|...|...+.... +...-++..+..++++||+ ..+.|+|++|.|+++..+|..++.+|+..
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~~sa---epaRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGCLSA---EPARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAYDGHRPLTDFGTL 951 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCCccc---ccccchhHHHHhhhhcccc-chhhcccccccchhhcccCCcccCccccc
Confidence 23689999999 678888877653222 2223337889999999996 66899999999999999999999999854
Q ss_pred cccCCCCC-------CCCC------------------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 177 SEFDGNNE-------AANG------------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 177 ~~~~~~~~-------~~~~------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
........ ...+ ....+...+++.|.+||...+ ......+|+|++|+.+
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg------~~hgs~ad~~~~g~~l 1025 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG------RRHGSAADWWSSGVCL 1025 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc------ccCCCcchhhhhhhhh
Confidence 43321100 0000 011223345568999999887 3566789999999999
Q ss_pred HHHHhCCCCCChhhhhc----c-----------CCCCcchHHHHHHHhccCCCCCCChH---HHHhcc
Q 004025 232 YELFSGMRLSKTEELRN----T-----------ASIPKSLLPDYQRLLSSMPSRRLNSS---KLIENS 281 (778)
Q Consensus 232 yel~tg~~p~~~~~l~~----~-----------~~iP~~L~~~i~~lL~~dP~~Rps~~---~lL~~~ 281 (778)
+|.++|.++|+...-.+ + ..++....+++.+++..++.+|..+. +.-.|+
T Consensus 1026 ~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~ 1093 (1205)
T KOG0606|consen 1026 FEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHP 1093 (1205)
T ss_pred hhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCC
Confidence 99999999987654322 2 23345677888899999999999876 444443
No 447
>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms]
Probab=98.48 E-value=7e-07 Score=105.77 Aligned_cols=188 Identities=20% Similarity=0.167 Sum_probs=160.4
Q ss_pred cCCChhhhhhchHHHHHHHHhhCC--CCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh
Q 004025 325 EQLPRQIVLKKLLPLLASALEFGS--AAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS 402 (778)
Q Consensus 325 ~~fp~~~~~~kILP~Ll~~~~~~~--~~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~ 402 (778)
+..-.....+-.||.+....+... ....++..+=..+..+..+-|..+..+.+..+..+...+||-....+|+.++..
T Consensus 469 ~v~g~~~~s~slLp~i~el~~d~~wRvr~ail~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~ 548 (759)
T KOG0211|consen 469 DVIGISTVSNSLLPAIVELAEDLLWRVRLAILEYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVET 548 (759)
T ss_pred CcccchhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHH
Confidence 333444556667777776555431 111233333334445555667777788888888888999999999999999999
Q ss_pred cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcc
Q 004025 403 FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN 482 (778)
Q Consensus 403 l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~ 482 (778)
++.++-...+.|.++.++.+++...|-.++-++-.+++.++......+|||.+-.+..|+.+.||.|.+.-|.+|.+.|.
T Consensus 549 ~G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~si~~la~v~g~ei~~~~Llp~~~~l~~D~vanVR~nvak~L~~i~~~L~ 628 (759)
T KOG0211|consen 549 FGSEWARLEEIPKLLAMDLQDNYLVRMTTLFSIHELAEVLGQEITCEDLLPVFLDLVKDPVANVRINVAKHLPKILKLLD 628 (759)
T ss_pred hCcchhHHHhhHHHHHHhcCcccchhhHHHHHHHHHHHHhccHHHHHHHhHHHHHhccCCchhhhhhHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 483 EGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 483 ~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.+.+++.+.|+.- ...+|+....|.+|+.|
T Consensus 629 ~~~~~~~v~pll~-~L~~d~~~dvr~~a~~a 658 (759)
T KOG0211|consen 629 ESVRDEEVLPLLE-TLSSDQELDVRYRAILA 658 (759)
T ss_pred hHHHHHHHHHHHH-HhccCcccchhHHHHHH
Confidence 9999999999999 99999999999999999
No 448
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.39 E-value=2.3e-06 Score=87.63 Aligned_cols=108 Identities=16% Similarity=0.182 Sum_probs=77.4
Q ss_pred HHHHHHHHHHhcCCCCC--eeeEeeeeEecccccCCcccEEEEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHH
Q 004025 64 AAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKITIYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIA 138 (778)
Q Consensus 64 ~~~~~ev~~Lk~LrHPn--Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~ 138 (778)
..+.+|.+.+..|+.-+ +.+.+.+.+...+. ...-|||||++. +|.+++......... .....+.+++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~----~~~s~lite~l~~~~~L~~~~~~~~~~~~~---~~~~ll~~l~ 128 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGG----GYRSYLITEALPGAQDLRDLLQQWEQLDPS---QRRELLRALA 128 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC----ceeEEEEEEeCCCcccHHHHHHhhcccchh---hHHHHHHHHH
Confidence 45778888777775333 34455555542211 246789999983 688888764332212 2334489999
Q ss_pred HHHHHHHcCCCccccccCCCCeEEcCCC---cEEEEeccccccc
Q 004025 139 KAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWKLHAFDVLSEF 179 (778)
Q Consensus 139 ~aL~fLH~~~~ivH~dLkp~NI~v~~~g---~~KL~dFgla~~~ 179 (778)
..+.-||. ++++|+|+++.||||+.++ .+.|+||+-++..
T Consensus 129 ~~i~~lH~-~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 129 RLIAKLHD-AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHH-CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999995 9999999999999999887 8999999987654
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.32 E-value=1.2e-06 Score=89.45 Aligned_cols=75 Identities=13% Similarity=0.049 Sum_probs=49.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC--CeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP--NILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP--nIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.++.|. + .+|+++.. +|..+++|........ .....+.+|++.++.+++. .+.+++........ ....
T Consensus 5 ~l~~G~~n--~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~-----~~~~ 75 (223)
T cd05154 5 QLSGGQSN--LTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV-----LGTP 75 (223)
T ss_pred ecCCCccc--eEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc-----cCCc
Confidence 456665 6 78998864 3689999997654221 1234578899999998753 35666665543210 1256
Q ss_pred EEEecCC
Q 004025 103 YIVTEPV 109 (778)
Q Consensus 103 yIVtE~v 109 (778)
|+||||+
T Consensus 76 ~~v~e~i 82 (223)
T cd05154 76 FYVMERV 82 (223)
T ss_pred eEEEEEe
Confidence 8999999
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.31 E-value=7.1e-06 Score=87.31 Aligned_cols=136 Identities=10% Similarity=0.111 Sum_probs=87.3
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHH----------HHHHHHHHHhcCCCCCe--eeEeeeeEecccccCCcccEE
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLA----------AARNGVKRLRTVRHPNI--LAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~----------~~~~ev~~Lk~LrHPnI--lk~~d~~e~e~~~g~~~~~~l 102 (778)
.|++... .|+.|.||.+....-.+ ..+ .+.+|++.+..|..-+| ...+.+.+... ++ ....-
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~-~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~-~~--~~~~s 110 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGE-IFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGS-NP--ATRTS 110 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHH-HhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecC-CC--cccee
Confidence 4556554 57789999875432111 111 37788888887753332 22333333211 00 02356
Q ss_pred EEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-------CCcEEEEe
Q 004025 103 YIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-------TLDWKLHA 172 (778)
Q Consensus 103 yIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-------~g~~KL~d 172 (778)
|||||++. +|.+++....... .........+.+|+..+.-||. +|++|||+++.||+++. ++.+.|+|
T Consensus 111 ~LVte~l~~~~sL~~~~~~~~~~~-~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 111 FIITEDLAPTISLEDYCADWATNP-PDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred EEEEeeCCCCccHHHHHHhhcccC-CCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 89999993 5888886432111 1122233458999999999995 99999999999999975 46799999
Q ss_pred cccccc
Q 004025 173 FDVLSE 178 (778)
Q Consensus 173 Fgla~~ 178 (778)
|+.+..
T Consensus 189 l~r~~~ 194 (268)
T PRK15123 189 LHRAQI 194 (268)
T ss_pred CCcccc
Confidence 998753
No 451
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.30 E-value=5.8e-06 Score=81.64 Aligned_cols=127 Identities=14% Similarity=0.140 Sum_probs=85.8
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCe--eeEeeeeEecccccCC
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNI--LAFLHSTEVENIDATS 97 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnI--lk~~d~~e~e~~~g~~ 97 (778)
+..|. . .+|.+... |.+|.+|.=-.+.-.. -..+..++|.++|.+++--+| ..++++..
T Consensus 4 i~~GAEa--~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~-------- 71 (204)
T COG3642 4 IKQGAEA--IIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP-------- 71 (204)
T ss_pred hhCCcce--eEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC--------
Confidence 44555 4 57776543 4556677544433221 234567789999998874333 33444332
Q ss_pred cccEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
....|+|||+ + .|.+.|.... ... +..|-.-+.-|| .++|+||||.++||++..++ +.++|||+
T Consensus 72 --~~~~I~me~I~G~~lkd~l~~~~------~~~----~r~vG~~vg~lH-~~givHGDLTtsNiIl~~~~-i~~IDfGL 137 (204)
T COG3642 72 --DNGLIVMEYIEGELLKDALEEAR------PDL----LREVGRLVGKLH-KAGIVHGDLTTSNIILSGGR-IYFIDFGL 137 (204)
T ss_pred --CCCEEEEEEeCChhHHHHHHhcc------hHH----HHHHHHHHHHHH-hcCeecCCCccceEEEeCCc-EEEEECCc
Confidence 2568999999 3 4777877651 222 677777888899 49999999999999997655 99999999
Q ss_pred cccc
Q 004025 176 LSEF 179 (778)
Q Consensus 176 a~~~ 179 (778)
...-
T Consensus 138 g~~s 141 (204)
T COG3642 138 GEFS 141 (204)
T ss_pred cccc
Confidence 7643
No 452
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.29 E-value=5e-06 Score=95.76 Aligned_cols=149 Identities=21% Similarity=0.292 Sum_probs=119.9
Q ss_pred CCChhhhhhchHHHHHHHHhhCCCCchhhHHHH----HhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHh
Q 004025 326 QLPRQIVLKKLLPLLASALEFGSAAAPALTALL----KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQ 401 (778)
Q Consensus 326 ~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll----ki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~ 401 (778)
..+..-...+++|.|...++... .-.++..|| -|.++++.|+|.++|+|.|...|.+.|++|.-..|+.++.+.+
T Consensus 340 ~~s~~~~~~~~~p~l~pi~~~~~-~~~~~l~i~e~mdlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e 418 (700)
T KOG2137|consen 340 GLSQNEFGPKMLPALKPIYSASD-PKQALLFILENMDLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAE 418 (700)
T ss_pred ccchhhhhhhhhHHHHHHhccCC-cccchhhHHhhHHHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHH
Confidence 44555667788888888887622 222333333 4678899999999999999999999999999999999999999
Q ss_pred hcChhhhhhcchHHHHhh-cCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHH
Q 004025 402 SFSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGN 476 (778)
Q Consensus 402 ~l~~~~v~~~I~P~l~~g-f~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~k 476 (778)
.++-..|++.|+|.+... |..++..++-.+|-++-.++..++.-.+..+++|++...+.+ +|.|-.-++-...+
T Consensus 419 ~iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~~l~q~lD~~~v~d~~lpi~~~~~~~-dp~iv~~~~~i~~~ 493 (700)
T KOG2137|consen 419 SIDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLAGLIQRLDKAAVLDELLPILKCIKTR-DPAIVMGFLRIYEA 493 (700)
T ss_pred hccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-CcHHHHHHHHHHHH
Confidence 999999999999999776 667788999999999999999999999999999999999764 34444433333333
No 453
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.27 E-value=8.2e-06 Score=80.24 Aligned_cols=143 Identities=16% Similarity=0.042 Sum_probs=95.0
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+.+-+|. + .|+.+.. .|+.+.||.=..+.-.. -...+.++|.+.|.+++--+|.--.=++.+..
T Consensus 11 ~l~likQGAEA--rv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--- 83 (229)
T KOG3087|consen 11 SLELIKQGAEA--RVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--- 83 (229)
T ss_pred cceeeecccee--eEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC---
Confidence 344556676 6 7888887 58888888654433222 22455778999998887444432222222222
Q ss_pred CCcccEEEEEecCC-c--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cE--E
Q 004025 96 TSTKITIYIVTEPV-M--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DW--K 169 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~--K 169 (778)
.-.|+|||+ + .+.+++......... ++-..-.+.+|-+.+.-|| +..++||||..+||++..+| .| .
T Consensus 84 -----~~~i~ME~~~g~~~vk~~i~~~~~~~~~-d~~~~~~~~~iG~~igklH-~ndiiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 -----GGQIYMEFIDGASTVKDFILSTMEDESE-DEGLAELARRIGELIGKLH-DNDIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred -----CCeEEEEeccchhHHHHHHHHHccCccc-chhHHHHHHHHHHHHHHhh-hCCeecccccccceEEecCCCcCceE
Confidence 347889999 4 477777765432222 2222344888999999999 59999999999999998655 45 8
Q ss_pred EEeccccccc
Q 004025 170 LHAFDVLSEF 179 (778)
Q Consensus 170 L~dFgla~~~ 179 (778)
|+|||+...-
T Consensus 157 lIdfgls~~s 166 (229)
T KOG3087|consen 157 LIDFGLSSVS 166 (229)
T ss_pred EEeecchhcc
Confidence 9999997644
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.25 E-value=7.5e-06 Score=85.30 Aligned_cols=137 Identities=16% Similarity=0.101 Sum_probs=93.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC------------------Cc--hhHHHHHHHHHHHHhcCCCC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN------------------AQ--DGHLAAARNGVKRLRTVRHP 79 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~------------------~~--~~~~~~~~~ev~~Lk~LrHP 79 (778)
+.|+.+||.|- + .||.|... .|.+++||.-.... .. ......+++|++.|..|.-.
T Consensus 93 e~iG~~IGvGKEs--dVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 93 EAIGTKIGVGKES--DVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred HhhccccccCccc--eEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 56788899988 8 89999976 68999999764210 00 01244678999999998644
Q ss_pred --CeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 004025 80 --NILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (778)
Q Consensus 80 --nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dL 155 (778)
.|.+.++. +.-.+|||++. +|... ........+. +..|+.-+.-+- .+|+||||+
T Consensus 170 G~~VP~P~~~------------nRHaVvMe~ieG~eL~~~----r~~~en~~~i----l~~il~~~~~~~-~~GiVHGDl 228 (304)
T COG0478 170 GVKVPKPIAW------------NRHAVVMEYIEGVELYRL----RLDVENPDEI----LDKILEEVRKAY-RRGIVHGDL 228 (304)
T ss_pred CCCCCCcccc------------ccceeeeehcccceeecc----cCcccCHHHH----HHHHHHHHHHHH-HcCccccCC
Confidence 45555543 25689999994 44432 1111122232 444444444444 389999999
Q ss_pred CCCCeEEcCCCcEEEEecccccccCC
Q 004025 156 CLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 156 kp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
++-||+|+++|.+.++||--+.....
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v~~~h 254 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAVPISH 254 (304)
T ss_pred chheEEEecCCCEEEEeCcccccCCC
Confidence 99999999999999999987766543
No 455
>PRK09902 hypothetical protein; Provisional
Probab=98.11 E-value=3.7e-05 Score=78.28 Aligned_cols=137 Identities=11% Similarity=0.060 Sum_probs=89.1
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCC--CeeeEeeeeEecccccCCcccEEEEEecC
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHP--NILAFLHSTEVENIDATSTKITIYIVTEP 108 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ev~~Lk~LrHP--nIlk~~d~~e~e~~~g~~~~~~lyIVtE~ 108 (778)
.|+.-... |..+-+|.-...... ..-...+.+|+..|++|..- .+.+++ +++.....+ ...-+||||-
T Consensus 33 gV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~---~~rA~LVTe~ 106 (216)
T PRK09902 33 GVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEG---EWRALLVTED 106 (216)
T ss_pred eEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCC---ceEEEEEEEe
Confidence 57775543 445666654321100 11245688999988888622 255555 333211111 4568999998
Q ss_pred Cc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--EEEEeccccccc
Q 004025 109 VM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD--WKLHAFDVLSEF 179 (778)
Q Consensus 109 v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~--~KL~dFgla~~~ 179 (778)
++ +|.+++.+....... ...-..++.+|+.+|.-|| +.++.|+|+.+.||+++.+|. ++|+||+-++..
T Consensus 107 L~g~~~L~~~l~~~~~~~~~-~~~k~~il~~va~~ia~LH-~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 107 MAGFISIADWYAQHAVSPYS-DEVRQAMLKAVALAFKKMH-SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred CCCCccHHHHHhcCCcCCcc-hHHHHHHHHHHHHHHHHHH-HCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 84 688888765432111 1112233899999999999 599999999999999987777 999999987653
No 456
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.11 E-value=3.2e-05 Score=88.93 Aligned_cols=181 Identities=13% Similarity=0.150 Sum_probs=160.0
Q ss_pred hhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhh
Q 004025 332 VLKKLLPLLASALEFGSAA--APALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVD 409 (778)
Q Consensus 332 ~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~ 409 (778)
...+|+|.|++.|...+.. ...|.-+.+....|+.+.+.+.|+|.+..-|.+++..+|..-|..|..++.+|++..++
T Consensus 327 yq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~phv~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln 406 (690)
T KOG1243|consen 327 YQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPHVALGFLDTNATLREQTLKSMAVLAPKLSKRNLN 406 (690)
T ss_pred cccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHHHHhhcccCCHHHHHHHHHHHHHHHhhhchhhhc
Confidence 6778999999999876543 34566788999999999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhh
Q 004025 410 EQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV 489 (778)
Q Consensus 410 ~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~v 489 (778)
..++-+|..+=.|....||-.|.-.+..++|.|.....++-|.-.+.+-..|+.+.=|.-...-+.....++..++.+.-
T Consensus 407 ~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~aftralkdpf~paR~a~v~~l~at~~~~~~~~va~k 486 (690)
T KOG1243|consen 407 GELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLASAFTRALKDPFVPARKAGVLALAATQEYFDQSEVANK 486 (690)
T ss_pred HHHHHHHHhhCccccCcccccceeeecccccccchhhhccccchhhhhhhcCCCCCchhhhhHHHhhcccccchhhhhhh
Confidence 99999999998899999999999999999999977665555555566666799999999999999999999999888877
Q ss_pred hHHHHHhhhhcCCCchhhhheeee
Q 004025 490 LINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 490 L~~af~~~~lkD~f~~~R~A~l~a 513 (778)
++|... -.+.|+..-.|--|..+
T Consensus 487 Ilp~l~-pl~vd~e~~vr~~a~~~ 509 (690)
T KOG1243|consen 487 ILPSLV-PLTVDPEKTVRDTAEKA 509 (690)
T ss_pred cccccc-ccccCcccchhhHHHHH
Confidence 888888 78999998888777654
No 457
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.10 E-value=4.4e-05 Score=83.34 Aligned_cols=236 Identities=14% Similarity=0.121 Sum_probs=135.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+-..+..+|.|+ + .+|..-.- + -+.-|++.+...... .+.-....+.=.||-+-.=+ .+....--|+..
T Consensus 12 ~i~~gr~LgqGgea--~ly~l~e~--~-d~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rv-aWPqa~L~G~~~ 81 (637)
T COG4248 12 PIPPGRPLGQGGEA--DLYTLGEV--R-DQVAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRV-AWPQATLHGGRR 81 (637)
T ss_pred ccCCCccccCCccc--eeeecchh--h-chhheeecCCCchHH----HHHHHHhccCCCCcchhhhh-cccHHHhhCCCc
Confidence 445677888887 4 44443211 2 244588876432111 11111222333576543311 111111111111
Q ss_pred ccEEEEEecCCc---ChHHHHHHhC---cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 99 KITIYIVTEPVM---PLSEKIKELG---LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 99 ~~~lyIVtE~v~---~L~~~L~~~~---~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+-+.|..+. +...++.-.. .-....-.++......|+.+..-||+ .|.+-||++++|++|++++.+.|.|
T Consensus 82 ~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd~~~V~LVd 160 (637)
T COG4248 82 GKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSDDSKVVLVD 160 (637)
T ss_pred cceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeecCceEEEEc
Confidence 335888898883 5555543221 11112233455668899999999996 8999999999999999999999998
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccc-cccccccCCCCCcchhHHHHHHHHHHHhC-CCCCChhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAK-SDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEEL---- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~-~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~~~l---- 246 (778)
=+--....+. .....-++...|.|||+.. +.+.. ..-+...|.|+||+|||+++.| +.||..-.+
T Consensus 161 sDsfqi~~ng-------~~~~cpVg~~eftPPElQ~~~sf~g--~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 161 SDSFQINANG-------TLHLCPVGVSEFTPPELQTLPSFVG--FERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred ccceeeccCC-------ceEecccCccccCCHHHhccccccc--cCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 6543322211 1111123345899999976 32211 2334578999999999999887 566632111
Q ss_pred ------------------hcc-----------CCCCcchHHHHHHHhcc--CCCCCCChH
Q 004025 247 ------------------RNT-----------ASIPKSLLPDYQRLLSS--MPSRRLNSS 275 (778)
Q Consensus 247 ------------------~~~-----------~~iP~~L~~~i~~lL~~--dP~~Rps~~ 275 (778)
+.. .-+|+.+..++.+|+.. ++.-||+++
T Consensus 232 p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 232 PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 000 12456677788888764 577899974
No 458
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.80 E-value=8.6e-05 Score=76.80 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=88.9
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC----------------------chhHHHHHHHHHHHHhcCCCCC--
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA----------------------QDGHLAAARNGVKRLRTVRHPN-- 80 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~----------------------~~~~~~~~~~ev~~Lk~LrHPn-- 80 (778)
.|.+|- . +||.|.. .++..|+||++..... ........+.|++.|+++..-+
T Consensus 55 ~istGKEA--~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 55 CISTGKEA--NVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred eecCCcce--EEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344444 4 8999986 4789999999974311 0122334678999999986433
Q ss_pred eeeEeeeeEecccccCCcccEEEEEecCCcCh---HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 81 ILAFLHSTEVENIDATSTKITIYIVTEPVMPL---SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 81 Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~~L---~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
+.+-+.+. .-.||||+++.= .-.|+....... .......++++.+.-|-..+++||+||+.
T Consensus 132 vP~Pi~~~------------~nVLvMEfIg~~g~pAP~LkDv~~e~~----e~~~~~~~~v~~~~~l~~~a~LVHgDLSE 195 (268)
T COG1718 132 VPEPIAFR------------NNVLVMEFIGDDGLPAPRLKDVPLELE----EAEGLYEDVVEYMRRLYKEAGLVHGDLSE 195 (268)
T ss_pred CCCceeec------------CCeEEEEeccCCCCCCCCcccCCcCch----hHHHHHHHHHHHHHHHHHhcCcccccchh
Confidence 33333333 247999999521 111222221111 11222667888888777569999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCC
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
-||++. +|...++||+-+.....
T Consensus 196 yNiL~~-~~~p~iID~~QaV~~~h 218 (268)
T COG1718 196 YNILVH-DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred hheEEE-CCeEEEEECccccccCC
Confidence 999998 88999999998877654
No 459
>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms]
Probab=97.77 E-value=0.0002 Score=85.29 Aligned_cols=209 Identities=20% Similarity=0.256 Sum_probs=164.7
Q ss_pred chhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHHHH---Hhcc----CCChhhhhhhhHHHHHHhhcCChHHHHHHH
Q 004025 320 LPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL---KMGS----WLSTEEFSVKVLPTIVKLFASNDRAIRVAL 392 (778)
Q Consensus 320 L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll---ki~~----~l~~eef~~~i~P~i~~lF~~~Dr~iR~~L 392 (778)
...+.+.+|..-...-++|.++..++... +.+...+. .... ...-+......+|.|+.+=...-+.+|..+
T Consensus 422 ~~~~~p~~~k~~ti~~llp~~~~~l~de~--~~V~lnli~~ls~~~~v~~v~g~~~~s~slLp~i~el~~d~~wRvr~ai 499 (759)
T KOG0211|consen 422 ITGLSPILPKERTISELLPLLIGNLKDED--PIVRLNLIDKLSLLEEVNDVIGISTVSNSLLPAIVELAEDLLWRVRLAI 499 (759)
T ss_pred ccccCccCCcCcCccccChhhhhhcchhh--HHHHHhhHHHHHHHHhccCcccchhhhhhhhhhhhhhccchhHHHHHHH
Confidence 33445556655555566777776555432 22222222 2222 233466778889999999655558999999
Q ss_pred HHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHH
Q 004025 393 LQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTI 472 (778)
Q Consensus 393 L~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~i 472 (778)
+++++.....+....++++.-+.+.+++.|....||+.+.+.+..++..++...-..++.|.+.....++.--.|.-+..
T Consensus 500 l~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~~G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~ 579 (759)
T KOG0211|consen 500 LEYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVETFGSEWARLEEIPKLLAMDLQDNYLVRMTTLF 579 (759)
T ss_pred HHHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHhCcchhHHHhhHHHHHHhcCcccchhhHHHH
Confidence 99999999999999999988888888899999999999999999999999987778888888888877777899999999
Q ss_pred HHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--c---c--------------------CCHHHHHHHHHH
Q 004025 473 LLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--S---Y--------------------LNCDVRSKAFQA 527 (778)
Q Consensus 473 cl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~---~--------------------~~~~VR~~a~~~ 527 (778)
||.-|++.++.+...+-|+|-|- +..+|+.+-.|.-++.. . + .+..||-.|..+
T Consensus 580 si~~la~v~g~ei~~~~Llp~~~-~l~~D~vanVR~nvak~L~~i~~~L~~~~~~~~v~pll~~L~~d~~~dvr~~a~~a 658 (759)
T KOG0211|consen 580 SIHELAEVLGQEITCEDLLPVFL-DLVKDPVANVRINVAKHLPKILKLLDESVRDEEVLPLLETLSSDQELDVRYRAILA 658 (759)
T ss_pred HHHHHHHHhccHHHHHHHhHHHH-HhccCCchhhhhhHHHHHHHHHhhcchHHHHHHHHHHHHHhccCcccchhHHHHHH
Confidence 99999999999999999999999 99999999999888776 1 1 677788777766
Q ss_pred HHHH
Q 004025 528 VDQF 531 (778)
Q Consensus 528 ~~~~ 531 (778)
+...
T Consensus 659 ~~~i 662 (759)
T KOG0211|consen 659 FGSI 662 (759)
T ss_pred HHHH
Confidence 5543
No 460
>PRK09687 putative lyase; Provisional
Probab=97.64 E-value=0.00034 Score=75.01 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=74.0
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhh-cCCCcHHHHHHHHHHHHhhhccCChhhHhH
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQRTISG 449 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~g-f~Dt~~~iRe~tlksi~~l~pkL~~~~l~~ 449 (778)
..+++.+.+++.+.|+.+|.....-|-.+...-. ....++|.|... +.|.++.||..++.++-.+...-... ..
T Consensus 53 ~~~~~~l~~ll~~~d~~vR~~A~~aLg~lg~~~~---~~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~~~--~~ 127 (280)
T PRK09687 53 QDVFRLAIELCSSKNPIERDIGADILSQLGMAKR---CQDNVFNILNNLALEDKSACVRASAINATGHRCKKNPLY--SP 127 (280)
T ss_pred chHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCcc---chHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccccc--ch
Confidence 4556666666666666677666655555433111 023456666544 56666777777666666554322111 23
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 450 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 450 ~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.++..+..+..|+++.||..++..||+|.. .--++++. +.|+|+.+-.|.+|+++
T Consensus 128 ~a~~~l~~~~~D~~~~VR~~a~~aLg~~~~--------~~ai~~L~-~~L~d~~~~VR~~A~~a 182 (280)
T PRK09687 128 KIVEQSQITAFDKSTNVRFAVAFALSVIND--------EAAIPLLI-NLLKDPNGDVRNWAAFA 182 (280)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHhccCC--------HHHHHHHH-HHhcCCCHHHHHHHHHH
Confidence 445555555566666777777776666531 22456666 66777777777776666
No 461
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.53 E-value=0.00046 Score=79.68 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=81.6
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------------------------c--------hhHHHH------H
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------------------------Q--------DGHLAA------A 66 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~------------------------~--------~~~~~~------~ 66 (778)
.++.++ | .||+|+.++ |+.|+||+..-.-. . +...+. +
T Consensus 132 PiAsASIa--QVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy 208 (517)
T COG0661 132 PIASASIA--QVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY 208 (517)
T ss_pred chhhhhHh--hheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence 455565 7 899999884 99999999863100 0 001111 2
Q ss_pred HHHHHHHhcC----CCCCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHH--HHHhCcCCCcchHHHHHHHHHHH
Q 004025 67 RNGVKRLRTV----RHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK--IKELGLEGSQRDEYYAWGLNQIA 138 (778)
Q Consensus 67 ~~ev~~Lk~L----rHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~--L~~~~~~~~~~~~~i~~gl~QI~ 138 (778)
++|...+.++ ++..=+++=.+|.+-+ ..-.|+|||+. ++.+. ++..+.. ..+....++...+
T Consensus 209 ~~EA~n~~~~~~nf~~~~~v~VP~V~we~t-------~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 209 RREAANAERFRENFKDDPDVYVPKVYWEYT-------TRRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRAFL 278 (517)
T ss_pred HHHHHHHHHHHHHcCCCCCeEeceeehhcc-------CCcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHHHH
Confidence 3344444444 2333344444443221 24589999993 56665 4443332 2222222222211
Q ss_pred HHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 139 KAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 139 ~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
+ .-| + .++.|+|.+|.||+|+.+|.+-+.|||+...+..
T Consensus 279 ~-q~~-~--dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 R-QLL-R--DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred H-HHH-h--cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 1 111 2 4799999999999999999999999999877653
No 462
>PRK09687 putative lyase; Provisional
Probab=97.49 E-value=0.00082 Score=72.10 Aligned_cols=127 Identities=14% Similarity=0.127 Sum_probs=94.6
Q ss_pred hhhhHHHHHHh-hcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHh
Q 004025 370 SVKVLPTIVKL-FASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS 448 (778)
Q Consensus 370 ~~~i~P~i~~l-F~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~ 448 (778)
+..++|.+..+ ...+|..||.....-|-.+...-. .....++..+...+.|.++.||..++.++. ++. +
T Consensus 88 ~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~--~~~~~a~~~l~~~~~D~~~~VR~~a~~aLg----~~~----~ 157 (280)
T PRK09687 88 QDNVFNILNNLALEDKSACVRASAINATGHRCKKNP--LYSPKIVEQSQITAFDKSTNVRFAVAFALS----VIN----D 157 (280)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccc--ccchHHHHHHHHHhhCCCHHHHHHHHHHHh----ccC----C
Confidence 34678888877 678889999877776655432221 113456778888899999999999999984 333 2
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 449 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 449 ~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.+.++.|.++..|+++.||-+++..||+|.. ...-.++++. ++|.|+...+|.+|+.+
T Consensus 158 ~~ai~~L~~~L~d~~~~VR~~A~~aLg~~~~------~~~~~~~~L~-~~L~D~~~~VR~~A~~a 215 (280)
T PRK09687 158 EAAIPLLINLLKDPNGDVRNWAAFALNSNKY------DNPDIREAFV-AMLQDKNEEIRIEAIIG 215 (280)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhcCCC------CCHHHHHHHH-HHhcCCChHHHHHHHHH
Confidence 4456667777789999999999999999921 1223467777 89999999999999998
No 463
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.42 E-value=0.00056 Score=74.17 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=92.7
Q ss_pred eeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC------------------------CCchhHHHHHHHHHHHHhcC
Q 004025 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT------------------------NAQDGHLAAARNGVKRLRTV 76 (778)
Q Consensus 22 ~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~------------------------~~~~~~~~~~~~ev~~Lk~L 76 (778)
+|...|..|- . .||.++. .+|+.+|||+|..+ +......-.+..|++.|++|
T Consensus 147 ~inGCiSTGKEA--NVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl 223 (520)
T KOG2270|consen 147 EINGCISTGKEA--NVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRL 223 (520)
T ss_pred ecccccccCccc--eeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHH
Confidence 4455666665 5 7999985 58899999999732 11112334578899999999
Q ss_pred CCCCeeeEeeeeEecccccCCcccEEEEEecCCcC---hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccc
Q 004025 77 RHPNILAFLHSTEVENIDATSTKITIYIVTEPVMP---LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 77 rHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~~---L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
+.-+ +++-+.+.-. .-.|||++++- -.-.|+...+......+. -.|++.-+.-|-+.|++||.
T Consensus 224 ~~aG-IP~PePIlLk---------~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~----Y~~~v~~MR~lY~~c~LVHA 289 (520)
T KOG2270|consen 224 NNAG-IPCPEPILLK---------NHVLVMEFLGRDGWAAPKLKDASLSTSKAREL----YQQCVRIMRRLYQKCRLVHA 289 (520)
T ss_pred HhcC-CCCCCceeee---------cceEeeeeccCCCCcCcccccccCChHHHHHH----HHHHHHHHHHHHHHhceecc
Confidence 8766 4444444431 45799999951 122333333332222222 45677777777778999999
Q ss_pred ccCCCCeEEcCCCcEEEEeccccccc
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
||+--|+++ .+|.+.++|.+-+...
T Consensus 290 DLSEfN~Ly-hdG~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 290 DLSEFNLLY-HDGKLYIIDVSQSVEH 314 (520)
T ss_pred chhhhhheE-ECCEEEEEEccccccC
Confidence 999999999 5678888887765544
No 464
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]. The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A.
Probab=97.41 E-value=0.0024 Score=66.17 Aligned_cols=150 Identities=17% Similarity=0.250 Sum_probs=97.5
Q ss_pred HHHHHhhcCChHHHHHHHHHhHHHHHhhcChhh--hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH-
Q 004025 375 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL- 451 (778)
Q Consensus 375 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~--v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L- 451 (778)
..|.+.+.+.--.|--..+.-+..+..++.... +-+.++|.++.-+.|++..||+.+..++..++...+. ...+
T Consensus 56 ~~i~~~l~d~Rs~v~~~A~~~l~~l~~~l~~~~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~~---~~~~~ 132 (228)
T PF12348_consen 56 DAIIKQLSDLRSKVSKTACQLLSDLARQLGSHFEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCSY---SPKIL 132 (228)
T ss_dssp HHHHH-S-HH---HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS-H-----HHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCCc---HHHHH
Confidence 445554432222344455555566666655551 3466899999999999999999999999999987771 1233
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhcc--ccc-ch----hhhHHHHHhhhhcCCCchhhhheeeeccCCHHHHHHH
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLN--EGT-RK----RVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKA 524 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~--~~~-~~----~vL~~af~~~~lkD~f~~~R~A~l~a~~~~~~VR~~a 524 (778)
++.+.....+..+.+|.-++.||..+....+ ... .. +.+++++. +.+.|+. .+||+.|
T Consensus 133 ~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~~~~~l~~~~~~~~l~~~l~-~~l~D~~--------------~~VR~~A 197 (228)
T PF12348_consen 133 LEILSQGLKSKNPQVREECAEWLAIILEKWGSDSSVLQKSAFLKQLVKALV-KLLSDAD--------------PEVREAA 197 (228)
T ss_dssp HHHHHHHTT-S-HHHHHHHHHHHHHHHTT-----GGG--HHHHHHHHHHHH-HHHTSS---------------HHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHccchHhhhcccchHHHHHHHHH-HHCCCCC--------------HHHHHHH
Confidence 7778888889999999999999999998888 222 12 45888888 8999986 7888889
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 004025 525 FQAVDQFLQIVKQYHEKT 542 (778)
Q Consensus 525 ~~~~~~~l~~l~~~~~~~ 542 (778)
+++|..|.+...+-++.+
T Consensus 198 r~~~~~l~~~~~~~a~~~ 215 (228)
T PF12348_consen 198 RECLWALYSHFPERAESI 215 (228)
T ss_dssp HHHHHHHHHHH-HHH---
T ss_pred HHHHHHHHHHCCHhhccc
Confidence 999999888777766553
No 465
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.33 E-value=0.00067 Score=78.20 Aligned_cols=135 Identities=14% Similarity=0.135 Sum_probs=84.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC--------------------------------------ch-hHHHH
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA--------------------------------------QD-GHLAA 65 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~--------------------------------------~~-~~~~~ 65 (778)
.|+..+ | .||+|+.+. |+.|+||+=...-. .+ .....
T Consensus 168 piaaASla--QVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 168 PIAAASLA--QVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred hhhhcchh--heEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 455555 6 899999885 99999998652100 00 11233
Q ss_pred HHHHHHHHhcCCCCC------eeeEeeeeEecccccCCcccEEEEEecCCc--ChH--HHHHHhCcCCCcch-HHHHHHH
Q 004025 66 ARNGVKRLRTVRHPN------ILAFLHSTEVENIDATSTKITIYIVTEPVM--PLS--EKIKELGLEGSQRD-EYYAWGL 134 (778)
Q Consensus 66 ~~~ev~~Lk~LrHPn------Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~--~~L~~~~~~~~~~~-~~i~~gl 134 (778)
++|.-+..+.++|-+ |.+++-.+.+ .-.++||||. ++. +.|++.+....... ..+.+.+
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st----------~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~ 314 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLST----------KRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL 314 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcCc----------ceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH
Confidence 445545555666666 5555544432 5689999993 232 56666665432111 1122223
Q ss_pred HHHHHHHHHHHcCCCccccccCCCCeEEcC----CCcEEEEecccccccCC
Q 004025 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ----TLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 135 ~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~----~g~~KL~dFgla~~~~~ 181 (778)
.|| |. .|++|+|=+|.||+|.. ++++.|-|||+...+..
T Consensus 315 ~qI-----f~---~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 315 EQI-----FK---TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHH-----Hh---cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 333 32 46999999999999994 67899999999887654
No 466
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1
Probab=97.26 E-value=0.0013 Score=65.81 Aligned_cols=108 Identities=18% Similarity=0.261 Sum_probs=92.5
Q ss_pred hHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCC
Q 004025 385 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEP 464 (778)
Q Consensus 385 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~ 464 (778)
|+.||..++.-|..++-+.+.- -+...|.++..+.|.++.||.+|+..+.+++-. +.-.+++.++..+.++-.|+++
T Consensus 1 ~~~vR~n~i~~l~DL~~r~~~~--ve~~~~~l~~~L~D~~~~VR~~al~~Ls~Li~~-d~ik~k~~l~~~~l~~l~D~~~ 77 (178)
T PF12717_consen 1 DPSVRNNAIIALGDLCIRYPNL--VEPYLPNLYKCLRDEDPLVRKTALLVLSHLILE-DMIKVKGQLFSRILKLLVDENP 77 (178)
T ss_pred CHHHHHHHHHHHHHHHHhCcHH--HHhHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc-CceeehhhhhHHHHHHHcCCCH
Confidence 4678989999999888888743 367899999999999999999999999998843 4455678887888888899999
Q ss_pred cchhhHHHHHHHhhhhcccccchhhhHHHHH
Q 004025 465 AIRTNTTILLGNIASHLNEGTRKRVLINAFT 495 (778)
Q Consensus 465 ~IRtnt~icl~kIa~~L~~~~~~~vL~~af~ 495 (778)
.||..+..|+..++...+++.-..++...+.
T Consensus 78 ~Ir~~A~~~~~e~~~~~~~~~i~~~~~e~i~ 108 (178)
T PF12717_consen 78 EIRSLARSFFSELLKKRNPNIIYNNFPELIS 108 (178)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 9999999999999999888877777777776
No 467
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]. The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A.
Probab=97.26 E-value=0.0015 Score=67.67 Aligned_cols=116 Identities=22% Similarity=0.310 Sum_probs=90.5
Q ss_pred hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcc-hHHHHhhcCCCcHHHHHHHHHHHHhhhccCC-
Q 004025 366 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQV-YPHVATGFADTSAFLREMTLKSMLVLAPKLS- 443 (778)
Q Consensus 366 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I-~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~- 443 (778)
-+.|...++|.|++.+++.-..||-....-|..++++.+ +..++ ++.+..|+.+.++.+|+.++..+..++.+.+
T Consensus 88 ~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~---~~~~~~~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~ 164 (228)
T PF12348_consen 88 FEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCS---YSPKILLEILSQGLKSKNPQVREECAEWLAIILEKWGS 164 (228)
T ss_dssp GHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS----H--HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCC---cHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHccc
Confidence 466778899999999999989999999999999999988 11234 8899999999999999999999999999988
Q ss_pred -hhhH-----hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc
Q 004025 444 -QRTI-----SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG 484 (778)
Q Consensus 444 -~~~l-----~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~ 484 (778)
...+ ...+.+.+.++-.|..+.||-..-.|+..+..+.+..
T Consensus 165 ~~~~l~~~~~~~~l~~~l~~~l~D~~~~VR~~Ar~~~~~l~~~~~~~ 211 (228)
T PF12348_consen 165 DSSVLQKSAFLKQLVKALVKLLSDADPEVREAARECLWALYSHFPER 211 (228)
T ss_dssp --GGG--HHHHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHH-HH
T ss_pred hHhhhcccchHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHh
Confidence 3332 2568999999999999999999999999998887654
No 468
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.23 E-value=0.0014 Score=67.22 Aligned_cols=65 Identities=15% Similarity=0.188 Sum_probs=47.4
Q ss_pred EEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..+++|||+. +|.+... ..+.+ ...|..+|.-||. .|++|||.+|.|++++.+ .+++.||+..+.
T Consensus 117 ~~~ll~EYIeG~~l~d~~~--------i~e~~---~~ki~~~ikqlH~-~G~~HGD~hpgNFlv~~~-~i~iID~~~k~~ 183 (229)
T PF06176_consen 117 SYVLLMEYIEGVELNDIED--------IDEDL---AEKIVEAIKQLHK-HGFYHGDPHPGNFLVSNN-GIRIIDTQGKRM 183 (229)
T ss_pred EEEEEEEEecCeecccchh--------cCHHH---HHHHHHHHHHHHH-cCCccCCCCcCcEEEECC-cEEEEECccccc
Confidence 5568999993 4554321 11112 3567788999995 999999999999999855 599999986553
No 469
>PTZ00429 beta-adaptin; Provisional
Probab=97.19 E-value=0.0027 Score=76.53 Aligned_cols=135 Identities=13% Similarity=0.183 Sum_probs=99.6
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 451 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L 451 (778)
.+.|-+++++.++|-.+|=...-++..|.+.-+...+ -....|..-+.|.|+.||..+|+.|..|- ...+...+
T Consensus 68 ~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~pelal--LaINtl~KDl~d~Np~IRaLALRtLs~Ir----~~~i~e~l 141 (746)
T PTZ00429 68 YLFVDVVKLAPSTDLELKKLVYLYVLSTARLQPEKAL--LAVNTFLQDTTNSSPVVRALAVRTMMCIR----VSSVLEYT 141 (746)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcccChHHHH--HHHHHHHHHcCCCCHHHHHHHHHHHHcCC----cHHHHHHH
Confidence 3567788888888888886666666667654444322 24577788889999999999999887543 67777888
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
++.+.+...|..|-||-++++|+.||-..-..-....-+++-.. .+|.|+.+-+..+|+.+
T Consensus 142 ~~~lkk~L~D~~pYVRKtAalai~Kly~~~pelv~~~~~~~~L~-~LL~D~dp~Vv~nAl~a 202 (746)
T PTZ00429 142 LEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQLFYQQDFKKDLV-ELLNDNNPVVASNAAAI 202 (746)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcccccccchHHHHH-HHhcCCCccHHHHHHHH
Confidence 88888888999999999999999998653322212333566677 78888888888888776
No 470
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E.
Probab=97.16 E-value=0.0027 Score=74.14 Aligned_cols=96 Identities=18% Similarity=0.269 Sum_probs=64.1
Q ss_pred chHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhH
Q 004025 412 VYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLI 491 (778)
Q Consensus 412 I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~ 491 (778)
+...+..-+.+.++.+|..+|+.+..+. ...+...+++.+.++..|+.|.||-++++|+.+|...-....+.. ++
T Consensus 80 ~~n~l~kdl~~~n~~~~~lAL~~l~~i~----~~~~~~~l~~~v~~ll~~~~~~VRk~A~~~l~~i~~~~p~~~~~~-~~ 154 (526)
T PF01602_consen 80 IINSLQKDLNSPNPYIRGLALRTLSNIR----TPEMAEPLIPDVIKLLSDPSPYVRKKAALALLKIYRKDPDLVEDE-LI 154 (526)
T ss_dssp HHHHHHHHHCSSSHHHHHHHHHHHHHH-----SHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCHCCHHGG-HH
T ss_pred HHHHHHHhhcCCCHHHHHHHHhhhhhhc----ccchhhHHHHHHHHHhcCCchHHHHHHHHHHHHHhccCHHHHHHH-HH
Confidence 4455666677777777777777777665 455556677777777777777777777777777776633333334 66
Q ss_pred HHHHhhhhcCCCchhhhheeee
Q 004025 492 NAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 492 ~af~~~~lkD~f~~~R~A~l~a 513 (778)
+.+. ++|+|+.+.++.+|+.+
T Consensus 155 ~~l~-~lL~d~~~~V~~~a~~~ 175 (526)
T PF01602_consen 155 PKLK-QLLSDKDPSVVSAALSL 175 (526)
T ss_dssp HHHH-HHTTHSSHHHHHHHHHH
T ss_pred HHHh-hhccCCcchhHHHHHHH
Confidence 7777 77777777777777666
No 471
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.09 E-value=0.0026 Score=66.16 Aligned_cols=135 Identities=10% Similarity=0.050 Sum_probs=74.9
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn--Ilk~~d~~e~e~~~g~~~~~~ 101 (778)
+.++.|. + .||+. .|..+.+|.+.... ....+++|.+.++.+..-+ +.+++++.+.. ..
T Consensus 7 ~~i~~G~t~--~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~--------~~ 68 (226)
T TIGR02172 7 TQTGEGGNG--ESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDG--------GR 68 (226)
T ss_pred eeecCCCCc--ceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecC--------Ce
Confidence 3566665 5 67863 25567788876422 2234688999998886333 35666666543 25
Q ss_pred EEEEecCC-c-C-hH--------------HHHHH----h-C--cCCCcchHHHHHH---HH-------HHHH-HHHHHH-
Q 004025 102 IYIVTEPV-M-P-LS--------------EKIKE----L-G--LEGSQRDEYYAWG---LN-------QIAK-AVSFLN- 145 (778)
Q Consensus 102 lyIVtE~v-~-~-L~--------------~~L~~----~-~--~~~~~~~~~i~~g---l~-------QI~~-aL~fLH- 145 (778)
.++|||++ | + +. ..+.+ . . ............. +. .+.. ...+|.
T Consensus 69 ~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~ 148 (226)
T TIGR02172 69 LGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKE 148 (226)
T ss_pred eeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence 78899998 3 2 11 11111 0 0 0111111111000 00 0111 122222
Q ss_pred --cCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 146 --NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 146 --~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
....++|||++|.||+++++| ..++||+.+..
T Consensus 149 ~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 149 VPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCCCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 123578999999999999988 99999998764
No 472
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=96.87 E-value=0.0095 Score=62.24 Aligned_cols=29 Identities=21% Similarity=0.382 Sum_probs=26.1
Q ss_pred CccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 149 ~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++|||+.|.||++++++...|+||+.+.
T Consensus 164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 48999999999999998778899999765
No 473
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=96.82 E-value=0.0063 Score=62.17 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=74.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn--Ilk~~d~~e~e~~~g~~~~~~l 102 (778)
.++.|. + .+|...... ..+.+|..... .....+.+|+..++.|..-+ +.+++........ ....
T Consensus 4 ~l~~G~~n--~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~-----~~~~ 70 (239)
T PF01636_consen 4 PLSGGFSN--RVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEF-----NGFP 70 (239)
T ss_dssp EEEESSSS--EEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEE-----TSEE
T ss_pred cCCCCCee--eEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccc-----cccc
Confidence 455555 5 789988754 58889997642 23456778888888875332 4556653332221 2358
Q ss_pred EEEecCCc--ChHH----------------HHHHhC-c--CCC--cc-h----H----HHHH-------H----HHHHHH
Q 004025 103 YIVTEPVM--PLSE----------------KIKELG-L--EGS--QR-D----E----YYAW-------G----LNQIAK 139 (778)
Q Consensus 103 yIVtE~v~--~L~~----------------~L~~~~-~--~~~--~~-~----~----~i~~-------g----l~QI~~ 139 (778)
|++||++. ++.. .+.... . ... .. . . ...+ . +..+..
T Consensus 71 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
T PF01636_consen 71 YLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEE 150 (239)
T ss_dssp EEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred eEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHH
Confidence 99999983 3433 111110 0 000 00 0 0 0000 0 111222
Q ss_pred -HHHHHH------cCCCccccccCCCCeEEc-CCCcEEEEecccccc
Q 004025 140 -AVSFLN------NDCKLVHGNVCLSSVVVT-QTLDWKLHAFDVLSE 178 (778)
Q Consensus 140 -aL~fLH------~~~~ivH~dLkp~NI~v~-~~g~~KL~dFgla~~ 178 (778)
.+..++ ....++|||+++.||+++ ++|.+-|+||+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 151 RLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 233333 235699999999999999 667778999987653
No 474
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=96.71 E-value=0.0081 Score=74.88 Aligned_cols=134 Identities=17% Similarity=0.187 Sum_probs=98.4
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
.++.|+..+.++|..||...++.|..+. ...++|.|...+.|.++.||..++.++..+...+....
T Consensus 622 ~~~~L~~~L~D~d~~VR~~Av~~L~~~~--------~~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~~~~------ 687 (897)
T PRK13800 622 SVAELAPYLADPDPGVRRTAVAVLTETT--------PPGFGPALVAALGDGAAAVRRAAAEGLRELVEVLPPAP------ 687 (897)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHhhhc--------chhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCchH------
Confidence 4567888889999999999998887764 23467888999999999999999999987765443321
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc------------CCH
Q 004025 453 KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY------------LNC 518 (778)
Q Consensus 453 ~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~------------~~~ 518 (778)
.|..+..|+++.||...+-.|+++... . ...|. ++|+|+.+..|.+|+.+ .. .+.
T Consensus 688 -~L~~~L~~~d~~VR~~A~~aL~~~~~~----~-----~~~l~-~~L~D~d~~VR~~Av~aL~~~~~~~~l~~~l~D~~~ 756 (897)
T PRK13800 688 -ALRDHLGSPDPVVRAAALDVLRALRAG----D-----AALFA-AALGDPDHRVRIEAVRALVSVDDVESVAGAATDENR 756 (897)
T ss_pred -HHHHHhcCCCHHHHHHHHHHHHhhccC----C-----HHHHH-HHhcCCCHHHHHHHHHHHhcccCcHHHHHHhcCCCH
Confidence 222233467788888888888886521 1 23456 78888888888888888 11 778
Q ss_pred HHHHHHHHHHHHH
Q 004025 519 DVRSKAFQAVDQF 531 (778)
Q Consensus 519 ~VR~~a~~~~~~~ 531 (778)
.||..|-+.|-..
T Consensus 757 ~VR~~aa~aL~~~ 769 (897)
T PRK13800 757 EVRIAVAKGLATL 769 (897)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888777554
No 475
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=96.70 E-value=0.0044 Score=75.11 Aligned_cols=107 Identities=21% Similarity=0.206 Sum_probs=97.4
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
|-..++.|.+.++.-||.+||+++-.+..++.++--||-|++|+++-+.|.+..+|-+-..+|..++-.+..+.+.+.||
T Consensus 579 V~~~v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLNDkDw~LR~aFfdsI~gvsi~VG~rs~seyll 658 (1431)
T KOG1240|consen 579 VEQMVSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLNDKDWRLRGAFFDSIVGVSIFVGWRSVSEYLL 658 (1431)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhcCccHHHHHHHHhhccceEEEEeeeeHHHHHH
Confidence 34455667788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhh
Q 004025 453 KYLSKLQVDEEPAIRTNTTILLGNIAS 479 (778)
Q Consensus 453 ~~laklq~D~~~~IRtnt~icl~kIa~ 479 (778)
|+|..-.+|.+..|=.+++=||.-+.+
T Consensus 659 PLl~Q~ltD~EE~Viv~aL~~ls~Lik 685 (1431)
T KOG1240|consen 659 PLLQQGLTDGEEAVIVSALGSLSILIK 685 (1431)
T ss_pred HHHHHhccCcchhhHHHHHHHHHHHHH
Confidence 999999999999998888887765543
No 476
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=96.66 E-value=0.012 Score=73.25 Aligned_cols=133 Identities=15% Similarity=0.173 Sum_probs=95.5
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHH
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGS 450 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~ 450 (778)
..++|.|++++.++|..||...+.-|-.+.+.++.. +.+...+.|.++.||...+.++..+-.- .
T Consensus 651 ~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~~~-------~~L~~~L~~~d~~VR~~A~~aL~~~~~~----~---- 715 (897)
T PRK13800 651 PGFGPALVAALGDGAAAVRRAAAEGLRELVEVLPPA-------PALRDHLGSPDPVVRAAALDVLRALRAG----D---- 715 (897)
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCch-------HHHHHHhcCCCHHHHHHHHHHHHhhccC----C----
Confidence 346788999999999999999998888776655432 4566677888999999988887665311 1
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--c--------c-----
Q 004025 451 LLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--S--------Y----- 515 (778)
Q Consensus 451 LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~--------~----- 515 (778)
...|.++..|+++.||..++..|++|.. ..++. .++.|+.+..|.++..+ . .
T Consensus 716 -~~~l~~~L~D~d~~VR~~Av~aL~~~~~-----------~~~l~-~~l~D~~~~VR~~aa~aL~~~~~~~~~~~~~L~~ 782 (897)
T PRK13800 716 -AALFAAALGDPDHRVRIEAVRALVSVDD-----------VESVA-GAATDENREVRIAVAKGLATLGAGGAPAGDAVRA 782 (897)
T ss_pred -HHHHHHHhcCCCHHHHHHHHHHHhcccC-----------cHHHH-HHhcCCCHHHHHHHHHHHHHhccccchhHHHHHH
Confidence 1234445578899999999999988632 12344 67888888888887776 0 0
Q ss_pred ----CCHHHHHHHHHHHHHH
Q 004025 516 ----LNCDVRSKAFQAVDQF 531 (778)
Q Consensus 516 ----~~~~VR~~a~~~~~~~ 531 (778)
++..||..|...|-.+
T Consensus 783 ll~D~d~~VR~aA~~aLg~~ 802 (897)
T PRK13800 783 LTGDPDPLVRAAALAALAEL 802 (897)
T ss_pred HhcCCCHHHHHHHHHHHHhc
Confidence 6778888887777554
No 477
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=96.62 E-value=0.008 Score=54.68 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=86.5
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh---cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ--- 444 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~--- 444 (778)
..++|.+++++...+..+|...+.-|..+... .....+...++|.++..+.|.++.+|+.++.++-.++..-..
T Consensus 6 ~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 85 (120)
T cd00020 6 AGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPEDNKL 85 (120)
T ss_pred cCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHHHHH
Confidence 44788888888888888887777777666654 444556668999999999999999999999999999865532
Q ss_pred hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhh
Q 004025 445 RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 478 (778)
Q Consensus 445 ~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa 478 (778)
..++..+++.|.++..+.+..+|-..+-+|..|+
T Consensus 86 ~~~~~g~l~~l~~~l~~~~~~~~~~a~~~l~~l~ 119 (120)
T cd00020 86 IVLEAGGVPKLVNLLDSSNEDIQKNATGALSNLA 119 (120)
T ss_pred HHHHCCChHHHHHHHhcCCHHHHHHHHHHHHHhh
Confidence 2234568999999988888999999999998876
No 478
>KOG1820 consensus Microtubule-associated protein [Cytoskeleton]
Probab=96.49 E-value=0.027 Score=68.17 Aligned_cols=190 Identities=14% Similarity=0.122 Sum_probs=136.8
Q ss_pred HhhhcccCChhhHhHhhhhchhhhcCCC--hhhhhhchHHHHHHHHhhCCCCch---hhHHHHHhccCCCh--hhhhhhh
Q 004025 301 FMEILNLKDSVEKDTFFRKLPNLAEQLP--RQIVLKKLLPLLASALEFGSAAAP---ALTALLKMGSWLST--EEFSVKV 373 (778)
Q Consensus 301 ~Le~l~~k~~~EK~~F~~~L~~~l~~fp--~~~~~~kILP~Ll~~~~~~~~~~~---~L~~llki~~~l~~--eef~~~i 373 (778)
+..++.-++-.++.+-+..+..++++=. ..-...-++-.+++.......... .+..+-.|+..|.. ..|...+
T Consensus 258 l~t~~~s~~WK~R~Eale~l~~~l~e~~~~~~~~~~~ll~~~~ki~~kDaN~~v~~~aa~~l~~ia~~lr~~~~~~~~~v 337 (815)
T KOG1820|consen 258 LETEMLSKKWKDRKEALEELVAILEEAKKEIVKGYTGLLGILLKIRLKDANINVVMLAAQILELIAKKLRPLFRKYAKNV 337 (815)
T ss_pred HHHhhhccchHHHHHHHHHHHHHHhccccccccCcchHHHHHHHHhccCcchhHHHHHHHHHHHHHHhcchhhHHHHHhh
Confidence 3444555666677777777766666544 111122234444444444332222 22333355555544 5688889
Q ss_pred HHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC----hhhHhH
Q 004025 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS----QRTISG 449 (778)
Q Consensus 374 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~----~~~l~~ 449 (778)
.|.|+.-|...-..+|=+|+.-++.+.. ....+.+++.+..++.+.+|.+|.+|..-+-....+++ ++....
T Consensus 338 ~p~lld~lkekk~~l~d~l~~~~d~~~n----s~~l~~~~~~I~e~lk~knp~~k~~~~~~l~r~~~~~~~~~~~~~t~~ 413 (815)
T KOG1820|consen 338 FPSLLDRLKEKKSELRDALLKALDAILN----STPLSKMSEAILEALKGKNPQIKGECLLLLDRKLRKLGPKTVEKETVK 413 (815)
T ss_pred cchHHHHhhhccHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHhhcCCcCcchhhHH
Confidence 9999999998888999999999988888 44556788999999999999999999988887777777 344567
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHH
Q 004025 450 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAF 494 (778)
Q Consensus 450 ~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af 494 (778)
.+.|++.+..+|.+..||.++.-|++-|...++.+.-++.|...+
T Consensus 414 ~l~p~~~~~~~D~~~~VR~Aa~e~~~~v~k~~Ge~~~~k~L~~~~ 458 (815)
T KOG1820|consen 414 TLVPHLIKHINDTDKDVRKAALEAVAAVMKVHGEEVFKKLLKDLD 458 (815)
T ss_pred HHhHHHhhhccCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhc
Confidence 899999999999999999999999999999999877555544444
No 479
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region
Probab=96.46 E-value=0.0069 Score=54.23 Aligned_cols=66 Identities=14% Similarity=0.278 Sum_probs=52.9
Q ss_pred hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhh--hhcchHHHHhhcCCCcHHHHHHH
Q 004025 366 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVV--DEQVYPHVATGFADTSAFLREMT 431 (778)
Q Consensus 366 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v--~~~I~P~l~~gf~Dt~~~iRe~t 431 (778)
.++|...|+|.|+.+|.++|..||+..++.|-.+.+....+.+ -++||.-++..+.|+++.||..+
T Consensus 21 ~~~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d~~Vr~~a 88 (97)
T PF12755_consen 21 ISKYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPDENVRSAA 88 (97)
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHH
Confidence 6778888999999999999999999999999888887776654 24577777777788877777653
No 480
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.44 E-value=0.0044 Score=62.55 Aligned_cols=99 Identities=18% Similarity=0.026 Sum_probs=70.0
Q ss_pred HHHHHHHhcCCC-CCeeeEeeeeEecccccCCcccEEEEEecCCcC--hHH---HHHHhCcCCCcchHHHHHHHHHHHHH
Q 004025 67 RNGVKRLRTVRH-PNILAFLHSTEVENIDATSTKITIYIVTEPVMP--LSE---KIKELGLEGSQRDEYYAWGLNQIAKA 140 (778)
Q Consensus 67 ~~ev~~Lk~LrH-PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~~--L~~---~L~~~~~~~~~~~~~i~~gl~QI~~a 140 (778)
.+|.-.|+.+.+ +++.++++++-. ++|+||++. +.. .+..... ........+..|+++.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~------------~~v~E~~~~~~~~~~~~~l~~~~~---~~w~~R~~iA~~lL~~ 71 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR------------FYVVEYVGAGSLYGIYRPLSQFLQ---SPWEQRAKIALQLLEL 71 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC------------EEEEEeecCccccccccccccccc---cCHHHHHHHHHHHHHH
Confidence 467888888876 699999999842 669999963 321 1111111 1122233447889999
Q ss_pred HHHHHcC--CCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 141 VSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 141 L~fLH~~--~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
+.+|++. ..+..+|++++|+-|+++|++|+.|.+.+....
T Consensus 72 l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 72 LEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred HHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 9998851 247778999999999999999999999876553
No 481
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.40 E-value=0.028 Score=63.22 Aligned_cols=75 Identities=15% Similarity=0.034 Sum_probs=47.1
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC----C-chhHHHHHHHHHHHHhcCC---CCCeeeEeeeeEeccccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN----A-QDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~----~-~~~~~~~~~~ev~~Lk~Lr---HPnIlk~~d~~e~e~~~g 95 (778)
+.++.|. + .||+++....++.|.||.-.... . .....++...|.+.|+.+. -..+.+++.+-++
T Consensus 32 ~elggGn~N--~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~----- 104 (401)
T PRK09550 32 REIGDGNLN--LVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEE----- 104 (401)
T ss_pred eEcCCCceE--EEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCC-----
Confidence 4566666 5 79999876433589999854110 1 0123456677777788763 2356777766432
Q ss_pred CCcccEEEEEecCCcC
Q 004025 96 TSTKITIYIVTEPVMP 111 (778)
Q Consensus 96 ~~~~~~lyIVtE~v~~ 111 (778)
.-++|||++.+
T Consensus 105 -----~~~lVME~L~~ 115 (401)
T PRK09550 105 -----LAVTVMEDLSD 115 (401)
T ss_pred -----CCEEEEecCCC
Confidence 46899999853
No 482
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.39 E-value=0.015 Score=57.45 Aligned_cols=131 Identities=14% Similarity=0.090 Sum_probs=86.6
Q ss_pred Cceec--cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIG--DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~--~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.|.+. +.++.|+ | .||.|..+ |..+++|+-... .....+..|.++|..+.--++-.=+-.+-
T Consensus 21 ~~~~~v~~~L~KG~~s--~Vyl~~~~--~~~~a~Kvrr~d----s~r~~l~kEakiLeil~g~~~~p~vy~yg------- 85 (201)
T COG2112 21 KYELRVEKELAKGTTS--VVYLGEWR--GGEVALKVRRRD----SPRRNLEKEAKILEILAGEGVTPEVYFYG------- 85 (201)
T ss_pred chhhhhhhhhhccccc--EEEEeecc--CceEEEEEecCC----cchhhHHHHHHHHHHhhhcCCCceEEEec-------
Confidence 44443 4678888 7 89999986 679999985532 33556889999999998666544333332
Q ss_pred CcccEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccC-CCCeEEcCCCcEEEEec
Q 004025 97 STKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC-LSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk-p~NI~v~~~g~~KL~dF 173 (778)
..+|+|||+ + +|...-... .... +..++++---|- ..+|-|+.|+ |..+++..++++.|+||
T Consensus 86 ----~~~i~me~i~G~~L~~~~~~~------~rk~----l~~vlE~a~~LD-~~GI~H~El~~~~k~vlv~~~~~~iIDF 150 (201)
T COG2112 86 ----EDFIRMEYIDGRPLGKLEIGG------DRKH----LLRVLEKAYKLD-RLGIEHGELSRPWKNVLVNDRDVYIIDF 150 (201)
T ss_pred ----hhhhhhhhhcCcchhhhhhcc------cHHH----HHHHHHHHHHHH-HhccchhhhcCCceeEEecCCcEEEEEc
Confidence 236679999 4 566543321 0111 455666633344 4799999998 55555555569999999
Q ss_pred ccccccC
Q 004025 174 DVLSEFD 180 (778)
Q Consensus 174 gla~~~~ 180 (778)
+-++...
T Consensus 151 d~At~k~ 157 (201)
T COG2112 151 DSATFKK 157 (201)
T ss_pred cchhhcc
Confidence 9988543
No 483
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []. Arrays of HEAT repeats consists of 3 to 36 units forming a rod-like helical structure and appear to function as protein-protein interaction surfaces. It has been noted that many HEAT repeat-containing proteins are involved in intracellular transport processes. In the crystal structure of PP2A PR65/A [], the HEAT repeats consist of pairs of antiparallel alpha helices [].; GO: 0005515 protein binding; PDB: 3FGA_A 2PF4_C 2IAE_A 2BKU_D 3EA5_B 3ND2_A 2BPT_A 2NYL_A 2NPP_D 2PKG_B ....
Probab=96.39 E-value=0.0023 Score=44.54 Aligned_cols=31 Identities=39% Similarity=0.519 Sum_probs=25.5
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhhc
Q 004025 451 LLKYLSKLQVDEEPAIRTNTTILLGNIASHL 481 (778)
Q Consensus 451 LL~~laklq~D~~~~IRtnt~icl~kIa~~L 481 (778)
|||.|.++..|+++.||.+++.|||+|++++
T Consensus 1 llp~l~~~l~D~~~~VR~~a~~~l~~i~~~~ 31 (31)
T PF02985_consen 1 LLPILLQLLNDPSPEVRQAAAECLGAIAEHC 31 (31)
T ss_dssp HHHHHHHHHT-SSHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHhhC
Confidence 6788888888999999999999999888764
No 484
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.14 E-value=0.056 Score=55.01 Aligned_cols=119 Identities=17% Similarity=0.220 Sum_probs=76.6
Q ss_pred cCCCCCCCceEEEEeEECCCCCcEEEEEEeCCC--------------CchhHHHHHHHHHHHHhcCC------CCCeeeE
Q 004025 25 DPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTN--------------AQDGHLAAARNGVKRLRTVR------HPNILAF 84 (778)
Q Consensus 25 ~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~--------------~~~~~~~~~~~ev~~Lk~Lr------HPnIlk~ 84 (778)
..++.|+.- .+|. +. ++...+||+..... .........++|++....+. +..|.++
T Consensus 7 ~~i~~G~~R-~cy~--HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 7 DLIAQGGER-DCYQ--HP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred cccccCCCc-eEEE--CC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 356666521 4555 22 45667799987654 01112445666776666665 8889999
Q ss_pred eeeeEecccccCCcccEEEEEecCCc--------ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 85 LHSTEVENIDATSTKITIYIVTEPVM--------PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 85 ~d~~e~e~~~g~~~~~~lyIVtE~v~--------~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
++..+++- -+-+|+|.+. +|.+++++.... . .+ ...+-+-..||- +.+|+.+||+
T Consensus 83 ~G~veT~~--------G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~----~-~~---~~~L~~f~~~l~-~~~Iv~~dl~ 145 (199)
T PF10707_consen 83 YGFVETNL--------GLGLVVELIRDADGNISPTLEDYLKEGGLT----E-EL---RQALDEFKRYLL-DHHIVIRDLN 145 (199)
T ss_pred eEEEecCC--------ceEEEEEEEECCCCCcCccHHHHHHcCCcc----H-HH---HHHHHHHHHHHH-HcCCeecCCC
Confidence 99999864 5688999882 388888665432 1 22 223333344555 4789999999
Q ss_pred CCCeEEcC
Q 004025 157 LSSVVVTQ 164 (778)
Q Consensus 157 p~NI~v~~ 164 (778)
|.||++..
T Consensus 146 ~~NIv~~~ 153 (199)
T PF10707_consen 146 PHNIVVQR 153 (199)
T ss_pred cccEEEEe
Confidence 99999963
No 485
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region
Probab=96.13 E-value=0.027 Score=50.43 Aligned_cols=66 Identities=17% Similarity=0.327 Sum_probs=57.2
Q ss_pred hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHh--HHHHHHHHhhccCCCCcchhhHHHH
Q 004025 408 VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS--GSLLKYLSKLQVDEEPAIRTNTTIL 473 (778)
Q Consensus 408 v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~--~~LL~~laklq~D~~~~IRtnt~ic 473 (778)
.-+.|+|.++.+|.|.+..||..+..++..++.......+. ++++..|.|+..|+++.||.-+..+
T Consensus 24 ~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d~~Vr~~a~~L 91 (97)
T PF12755_consen 24 YLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPDENVRSAAELL 91 (97)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHH
Confidence 44569999999999999999999999999999777766663 7889999999999999999876543
No 486
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.12 E-value=0.012 Score=72.15 Aligned_cols=200 Identities=17% Similarity=0.205 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHH
Q 004025 63 LAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKA 140 (778)
Q Consensus 63 ~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~a 140 (778)
.....-|+..+..++|+|+..++.+--.+-.. .-.+++..|+| .++...+...+.. ..+.......++.+|
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~----g~~~~v~~~~~s~~~~~~~~q~v~~i---~~~~~r~~~~~~~~G 298 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFR----GIVLDVLQEICSKVELRSLLQSVGSI---PLETLRILHQKLLEG 298 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcc----hHHHHHHHhhcCccchHHHHhhcccc---CHHHHHHHHHHHhhh
Confidence 33445677788889999999998877554322 12455667777 3577777665432 233344447899999
Q ss_pred HHHHHcCCCccccccCCC---CeEEcCCCcEEEE--ecccccccCCCCCCCCCCccccccccCCCCCCcccccccccccc
Q 004025 141 VSFLNNDCKLVHGNVCLS---SVVVTQTLDWKLH--AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215 (778)
Q Consensus 141 L~fLH~~~~ivH~dLkp~---NI~v~~~g~~KL~--dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~ 215 (778)
|.++|. ..+.|.-+..+ ..-++..+....+ +|+....+.+.... ........+.++|......
T Consensus 299 L~~~h~-~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~-------~~~~~~~~~~~~e~~~~~~---- 366 (1351)
T KOG1035|consen 299 LAYLHS-LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS-------FSDLLAEIRNADEDLKENT---- 366 (1351)
T ss_pred HHHHHH-hccceeEEecccccccccCccceeecchhhhcccccCCCcccc-------hhhcCcccccccccccccc----
Confidence 999996 66666555554 3333445556666 77777766543221 1112233455666654321
Q ss_pred CCCCCcchhHHHHHHHHHHHhCCCCCChhhh-hcc--CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-RNT--ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 216 ~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-~~~--~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.......|+|.+|.+...+..|..+...... ... ......+.....+|+..+++.|+++.+++.|+
T Consensus 367 ~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 367 AKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred chhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 1122346999999999999988654322111 110 11122456667889989999999999999997
No 487
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E.
Probab=96.01 E-value=0.047 Score=63.69 Aligned_cols=188 Identities=20% Similarity=0.236 Sum_probs=119.5
Q ss_pred ccCChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHHHH-HhccCCChhhhhhhhHHHHHHhhcCC
Q 004025 306 NLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL-KMGSWLSTEEFSVKVLPTIVKLFASN 384 (778)
Q Consensus 306 ~~k~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll-ki~~~l~~eef~~~i~P~i~~lF~~~ 384 (778)
...++.-+...++-|......-+....+..+++.+...+... ...++.-.. .+.......+....+++.+.+++.++
T Consensus 202 ~~~~~~~q~~il~~l~~~~~~~~~~~~~~~~i~~l~~~l~s~--~~~V~~e~~~~i~~l~~~~~~~~~~~~~L~~lL~s~ 279 (526)
T PF01602_consen 202 SDPDPWLQIKILRLLRRYAPMEPEDADKNRIIEPLLNLLQSS--SPSVVYEAIRLIIKLSPSPELLQKAINPLIKLLSSS 279 (526)
T ss_dssp TCCSHHHHHHHHHHHTTSTSSSHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHTSS
T ss_pred cccchHHHHHHHHHHHhcccCChhhhhHHHHHHHHHHHhhcc--ccHHHHHHHHHHHHhhcchHHHHhhHHHHHHHhhcc
Confidence 455555555555555444433333332245666666665522 122222212 22222233446788999999999999
Q ss_pred hHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCC
Q 004025 385 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEP 464 (778)
Q Consensus 385 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~ 464 (778)
|..+|+..|+.|..++.+-++.. . .....+.....|.+..||...+..+..++..=+-..+-++|+.++..+ .++
T Consensus 280 ~~nvr~~~L~~L~~l~~~~~~~v-~-~~~~~~~~l~~~~d~~Ir~~~l~lL~~l~~~~n~~~Il~eL~~~l~~~---~d~ 354 (526)
T PF01602_consen 280 DPNVRYIALDSLSQLAQSNPPAV-F-NQSLILFFLLYDDDPSIRKKALDLLYKLANESNVKEILDELLKYLSEL---SDP 354 (526)
T ss_dssp SHHHHHHHHHHHHHHCCHCHHHH-G-THHHHHHHHHCSSSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHC-----H
T ss_pred cchhehhHHHHHHHhhcccchhh-h-hhhhhhheecCCCChhHHHHHHHHHhhcccccchhhHHHHHHHHHHhc---cch
Confidence 99999999999999998874443 3 344445555558889999999999999998777777788888887322 245
Q ss_pred cchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCC
Q 004025 465 AIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTF 503 (778)
Q Consensus 465 ~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f 503 (778)
.+|-..+..|++|+...... ..-.+..+. +.++..-
T Consensus 355 ~~~~~~i~~I~~la~~~~~~--~~~~v~~l~-~ll~~~~ 390 (526)
T PF01602_consen 355 DFRRELIKAIGDLAEKFPPD--AEWYVDTLL-KLLEISG 390 (526)
T ss_dssp HHHHHHHHHHHHHHHHHGSS--HHHHHHHHH-HHHHCTG
T ss_pred hhhhhHHHHHHHHHhccCch--HHHHHHHHH-Hhhhhcc
Confidence 69999999999999888542 223344455 5555433
No 488
>PTZ00429 beta-adaptin; Provisional
Probab=96.00 E-value=0.1 Score=63.15 Aligned_cols=184 Identities=15% Similarity=0.125 Sum_probs=119.7
Q ss_pred cccccchh-hhhhHHhhhcccCChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHHH--HHhccCC
Q 004025 288 TEYFQNKL-VDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTAL--LKMGSWL 364 (778)
Q Consensus 288 ~~ff~n~l-v~~~~~Le~l~~k~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~l--lki~~~l 364 (778)
..||...- -+....-+++...+..+|..-++.+...+- .+.-...+.|..++.+...+.....|.-+ ..+++.-
T Consensus 23 ~~~f~~~~kge~~ELr~~L~s~~~~~kk~alKkvIa~mt---~G~DvS~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~ 99 (746)
T PTZ00429 23 SKYFAQTRRGEGAELQNDLNGTDSYRKKAAVKRIIANMT---MGRDVSYLFVDVVKLAPSTDLELKKLVYLYVLSTARLQ 99 (746)
T ss_pred cccccccccchHHHHHHHHHCCCHHHHHHHHHHHHHHHH---CCCCchHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccC
Confidence 36774221 122333344556667777766666543321 12223345666666655443333333332 2333322
Q ss_pred ChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh
Q 004025 365 STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 444 (778)
Q Consensus 365 ~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~ 444 (778)
.|-.-.++..+.+-+.++++-||-..|..|.. +.-..+-+.+.+.+..++.|.+|.||..++-++..+...-.+
T Consensus 100 --pelalLaINtl~KDl~d~Np~IRaLALRtLs~----Ir~~~i~e~l~~~lkk~L~D~~pYVRKtAalai~Kly~~~pe 173 (746)
T PTZ00429 100 --PEKALLAVNTFLQDTTNSSPVVRALAVRTMMC----IRVSSVLEYTLEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQ 173 (746)
T ss_pred --hHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHc----CCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcc
Confidence 23334567888888899999999888875544 444556677899999999999999999999999988754443
Q ss_pred hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhh
Q 004025 445 RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480 (778)
Q Consensus 445 ~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~ 480 (778)
......+++.|.++..|.++.|..|++..|..|...
T Consensus 174 lv~~~~~~~~L~~LL~D~dp~Vv~nAl~aL~eI~~~ 209 (746)
T PTZ00429 174 LFYQQDFKKDLVELLNDNNPVVASNAAAIVCEVNDY 209 (746)
T ss_pred cccccchHHHHHHHhcCCCccHHHHHHHHHHHHHHh
Confidence 333446777888888899999999999988888643
No 489
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A.
Probab=95.97 E-value=0.026 Score=48.80 Aligned_cols=86 Identities=16% Similarity=0.344 Sum_probs=63.8
Q ss_pred HHHHHHhh-cCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 374 LPTIVKLF-ASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 374 ~P~i~~lF-~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
+|.+++.+ .+++..+|...+..|. .+... ++.|.+...+.|.++.||.+++.++-.+- ..+.+
T Consensus 1 i~~L~~~l~~~~~~~vr~~a~~~L~----~~~~~----~~~~~L~~~l~d~~~~vr~~a~~aL~~i~--------~~~~~ 64 (88)
T PF13646_consen 1 IPALLQLLQNDPDPQVRAEAARALG----ELGDP----EAIPALIELLKDEDPMVRRAAARALGRIG--------DPEAI 64 (88)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHH----CCTHH----HHHHHHHHHHTSSSHHHHHHHHHHHHCCH--------HHHTH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHH----HcCCH----hHHHHHHHHHcCCCHHHHHHHHHHHHHhC--------CHHHH
Confidence 46777776 8899999988877666 33322 56899999999999999999999998652 34566
Q ss_pred HHHHhhcc-CCCCcchhhHHHHHH
Q 004025 453 KYLSKLQV-DEEPAIRTNTTILLG 475 (778)
Q Consensus 453 ~~laklq~-D~~~~IRtnt~icl~ 475 (778)
+.|.++.. |++..||..++-.||
T Consensus 65 ~~L~~~l~~~~~~~vr~~a~~aL~ 88 (88)
T PF13646_consen 65 PALIKLLQDDDDEVVREAAAEALG 88 (88)
T ss_dssp HHHHHHHTC-SSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcHHHHHHHHhhcC
Confidence 77777544 456677988877765
No 490
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=95.93 E-value=0.044 Score=57.06 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=25.6
Q ss_pred CCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..++|||+++.||+++.++..-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 3489999999999998765557999998654
No 491
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=95.92 E-value=0.073 Score=62.07 Aligned_cols=153 Identities=18% Similarity=0.203 Sum_probs=116.3
Q ss_pred HhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcCh---hhhhhcchHHHHhhcCCCcHHHHHHHHHHH
Q 004025 359 KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSM 435 (778)
Q Consensus 359 ki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi 435 (778)
++-..+..++-...+.+.+...+..++..||...|..+..++.+-+. -..++.|++.++.++.|.+..|.+.+++.+
T Consensus 64 ~~l~~~~~~~l~~~~~~~L~~gL~h~~~~Vr~l~l~~l~~~~~~~~~~~~~~~~~~l~~~i~~~L~~~d~~Va~~A~~~L 143 (503)
T PF10508_consen 64 RLLSALSPDSLLPQYQPFLQRGLTHPSPKVRRLALKQLGRIARHSEGAAQLLVDNELLPLIIQCLRDPDLSVAKAAIKAL 143 (503)
T ss_pred HHHhccCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHhcCccHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 44455666665777889999999999999999988888877755432 246678999999999999999999999999
Q ss_pred HhhhccCChh--hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchh----hhHHHHHhhhhcCCCchhhhh
Q 004025 436 LVLAPKLSQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKR----VLINAFTVRALRDTFSPARGA 509 (778)
Q Consensus 436 ~~l~pkL~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~----vL~~af~~~~lkD~f~~~R~A 509 (778)
..++..-..- .+.+.++..|.++...+...||....-++.+|+.+=. +.... =|++.+. +.|++..+-.|+.
T Consensus 144 ~~l~~~~~~~~~l~~~~~~~~L~~l~~~~~~~vR~Rv~el~v~i~~~S~-~~~~~~~~sgll~~ll-~eL~~dDiLvqln 221 (503)
T PF10508_consen 144 KKLASHPEGLEQLFDSNLLSKLKSLMSQSSDIVRCRVYELLVEIASHSP-EAAEAVVNSGLLDLLL-KELDSDDILVQLN 221 (503)
T ss_pred HHHhCCchhHHHHhCcchHHHHHHHHhccCHHHHHHHHHHHHHHHhcCH-HHHHHHHhccHHHHHH-HHhcCccHHHHHH
Confidence 9998643222 1234447888887766677899999999999875532 22222 2677887 8999999999999
Q ss_pred eeee
Q 004025 510 AKIL 513 (778)
Q Consensus 510 ~l~a 513 (778)
++.-
T Consensus 222 alel 225 (503)
T PF10508_consen 222 ALEL 225 (503)
T ss_pred HHHH
Confidence 8875
No 492
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.76 E-value=0.057 Score=59.71 Aligned_cols=74 Identities=12% Similarity=-0.010 Sum_probs=45.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCC-----CCchhHHHHHHHHHHHHhcCC--CC-CeeeEeeeeEecccccC
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT-----NAQDGHLAAARNGVKRLRTVR--HP-NILAFLHSTEVENIDAT 96 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~-----~~~~~~~~~~~~ev~~Lk~Lr--HP-nIlk~~d~~e~e~~~g~ 96 (778)
++|.|. . .||++.....++.|.||.-... ....-..++.+-|...|+... -| .+.+++.+-++
T Consensus 2 EigdGnlN--~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e------ 73 (370)
T TIGR01767 2 EVGDGNLN--LVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTE------ 73 (370)
T ss_pred cCCCCceE--EEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccc------
Confidence 466666 5 6999987543468999975421 111233455667777777764 45 35555554332
Q ss_pred CcccEEEEEecCCcC
Q 004025 97 STKITIYIVTEPVMP 111 (778)
Q Consensus 97 ~~~~~lyIVtE~v~~ 111 (778)
...+|||++.+
T Consensus 74 ----~~~~vMEdL~~ 84 (370)
T TIGR01767 74 ----MAVTVMEDLSH 84 (370)
T ss_pred ----cceehHhhCcc
Confidence 56799999953
No 493
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.75 E-value=0.038 Score=61.83 Aligned_cols=76 Identities=12% Similarity=-0.006 Sum_probs=48.0
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC----CCchhHHHHHHHHHHHHhcCC--CCC-eeeEeeeeEeccccc
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT----NAQDGHLAAARNGVKRLRTVR--HPN-ILAFLHSTEVENIDA 95 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~----~~~~~~~~~~~~ev~~Lk~Lr--HPn-Ilk~~d~~e~e~~~g 95 (778)
.++||.|. . -||++.....+..|.||.-... ....-..++.+-|...|+.+. -|. +.+++.+-++
T Consensus 34 ~~eigdGnlN--~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e----- 106 (409)
T PRK12396 34 CKEIGDGNLN--YVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSV----- 106 (409)
T ss_pred eeEcCCCceE--EEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcH-----
Confidence 34677776 5 6999987544567999965421 111234566777888888764 453 5556654332
Q ss_pred CCcccEEEEEecCCcC
Q 004025 96 TSTKITIYIVTEPVMP 111 (778)
Q Consensus 96 ~~~~~~lyIVtE~v~~ 111 (778)
...+|||++.+
T Consensus 107 -----~~~~vMEdL~~ 117 (409)
T PRK12396 107 -----MNCCVMEDLSD 117 (409)
T ss_pred -----HhhHHHHhCcc
Confidence 56789999843
No 494
>KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription]
Probab=95.73 E-value=0.032 Score=66.40 Aligned_cols=138 Identities=20% Similarity=0.324 Sum_probs=110.9
Q ss_pred hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhc---chHHHHhhcCCCcHHHHHHHHHHHHhhhcc--
Q 004025 367 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQ---VYPHVATGFADTSAFLREMTLKSMLVLAPK-- 441 (778)
Q Consensus 367 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~---I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk-- 441 (778)
+-|-..|+|.++..|...+-.+|-.+|.-|++.+.++|.+++-.+ ++|.+++++.=.+..+|-.|+..+..+..+
T Consensus 862 QRfF~~ivP~l~~~~~t~~~~~K~~yl~~LshVl~~vP~~vllp~~~~LlPLLLq~Ls~~D~~v~vstl~~i~~~l~~~~ 941 (1030)
T KOG1967|consen 862 QRFFCDIVPILVSKFETAPGSQKHNYLEALSHVLTNVPKQVLLPQFPMLLPLLLQALSMPDVIVRVSTLRTIPMLLTESE 941 (1030)
T ss_pred HHHHHhhHHHHHHHhccCCccchhHHHHHHHHHHhcCCHHhhccchhhHHHHHHHhcCCCccchhhhHhhhhhHHHHhcc
Confidence 556678999999999988889999999999999999999988765 699999999999999988887777655544
Q ss_pred -CChhhHhHHHHHHHHhhccCCC---CcchhhHHHHHHHhhhhcccc----cchhhhHHHHHhhhhcCCCchhh
Q 004025 442 -LSQRTISGSLLKYLSKLQVDEE---PAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPAR 507 (778)
Q Consensus 442 -L~~~~l~~~LL~~laklq~D~~---~~IRtnt~icl~kIa~~L~~~----~~~~vL~~af~~~~lkD~f~~~R 507 (778)
|-... -..+.|++..+-.|.+ -.||--++-||+.|...+... .|..| +.|.. +.|-|+---.|
T Consensus 942 tL~t~~-~~Tlvp~lLsls~~~~n~~~~VR~~ALqcL~aL~~~~P~~~l~~fr~~V-l~al~-k~LdDkKRlVR 1012 (1030)
T KOG1967|consen 942 TLQTEH-LSTLVPYLLSLSSDNDNNMMVVREDALQCLNALTRRLPTKSLLSFRPLV-LRALI-KILDDKKRLVR 1012 (1030)
T ss_pred ccchHH-HhHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHhccCCCcccccccHHH-HHHhh-hccCcHHHHHH
Confidence 33344 3679999999999877 589999999999999977653 34444 66777 77888763333
No 495
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=95.73 E-value=0.0041 Score=77.56 Aligned_cols=160 Identities=11% Similarity=-0.099 Sum_probs=107.1
Q ss_pred HHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHH-HHH
Q 004025 64 AAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQI-AKA 140 (778)
Q Consensus 64 ~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI-~~a 140 (778)
+....|..-++...|+++..+..-..... ....|++++|| +.+...|-+.........++...-.+|+ +.+
T Consensus 1274 emll~e~de~~~~~h~~~~~~p~rI~ps~------s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~ 1347 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSE------STEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLN 1347 (2724)
T ss_pred HhhhhhhhhhhhhhceeeecccccCCCCC------ChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhc
Confidence 34445556677889999998887776443 34679999999 5677766543322223334444446666 777
Q ss_pred HHHHHcCCC----ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccC
Q 004025 141 VSFLNNDCK----LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216 (778)
Q Consensus 141 L~fLH~~~~----ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~ 216 (778)
..-+|...+ -+|+++++-|.+|..+-.+|++++|+.+....... . .-..++++.|+.+++... -
T Consensus 1348 ~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~s-f-----~Gl~l~sp~~v~qli~N~------i 1415 (2724)
T KOG1826|consen 1348 RNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLS-F-----FGLELCSPIYVLQLIKNE------I 1415 (2724)
T ss_pred cchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCchHh-h-----hhhhhCCHHHHHHHHHHH------H
Confidence 777665333 67899999999999999999999999883322100 0 001133335667776553 2
Q ss_pred CCCCcchhHHHHHHHHHHHhCCCCC
Q 004025 217 SPPWSIDSWGLGCLIYELFSGMRLS 241 (778)
Q Consensus 217 ~~~~~~DiwSLG~liyel~tg~~p~ 241 (778)
.++.+.|+|..||.+|+...|.++|
T Consensus 1416 k~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1416 KFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred hhhhHHHHHHHHHHHHHHhcccHHH
Confidence 3445699999999999999987654
No 496
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=95.65 E-value=0.014 Score=53.02 Aligned_cols=100 Identities=12% Similarity=0.102 Sum_probs=74.8
Q ss_pred hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc---CChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccc
Q 004025 407 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE 483 (778)
Q Consensus 407 ~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk---L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~ 483 (778)
.+...++|.++.-+.+.++.+|+.++.++..++.. .....+..++++.|.++-.|.++.+|-+++.||+.|+..-..
T Consensus 3 ~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~ 82 (120)
T cd00020 3 VIQAGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPED 82 (120)
T ss_pred HHHcCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHH
Confidence 45567899999999999999999999999888843 333445558899999998999999999999999999976432
Q ss_pred cc---chhhhHHHHHhhhhcCCCchhh
Q 004025 484 GT---RKRVLINAFTVRALRDTFSPAR 507 (778)
Q Consensus 484 ~~---~~~vL~~af~~~~lkD~f~~~R 507 (778)
.. .+.-+++.+. +.|.+.....|
T Consensus 83 ~~~~~~~~g~l~~l~-~~l~~~~~~~~ 108 (120)
T cd00020 83 NKLIVLEAGGVPKLV-NLLDSSNEDIQ 108 (120)
T ss_pred HHHHHHHCCChHHHH-HHHhcCCHHHH
Confidence 11 1122466666 66666644333
No 497
>PLN02876 acyl-CoA dehydrogenase
Probab=95.60 E-value=0.096 Score=64.86 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=45.6
Q ss_pred cCCCCCC-CceEEEEeEECCCC--CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCe--eeEeeeeEecccccCCc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDG--SPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNI--LAFLHSTEVENIDATST 98 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g--~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnI--lk~~d~~e~e~~~g~~~ 98 (778)
+.++.|. + .+|.......+ ..+.+++....... .....+.+|++.|+.|. |++| .+++..+++....
T Consensus 44 ~~l~gG~sn--~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~---- 116 (822)
T PLN02876 44 SQFGHGQSN--PTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVI---- 116 (822)
T ss_pred EEeCCCCcC--ceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcC----
Confidence 3455555 4 56665544322 35666665432111 12335789999999996 6664 7777666543211
Q ss_pred ccEEEEEecCC
Q 004025 99 KITIYIVTEPV 109 (778)
Q Consensus 99 ~~~lyIVtE~v 109 (778)
...|+||||+
T Consensus 117 -G~~flVME~v 126 (822)
T PLN02876 117 -GTAFYIMEYL 126 (822)
T ss_pred -CCceEEEEec
Confidence 2568999998
No 498
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.58 E-value=0.083 Score=59.44 Aligned_cols=33 Identities=27% Similarity=0.318 Sum_probs=26.7
Q ss_pred HHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 143 FLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 143 fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
|+.+...++||||.+.|||++.++ .+++|.+++
T Consensus 225 f~~~~~~L~HGDl~~g~i~~~~~~-~~~id~ef~ 257 (418)
T PLN02756 225 FCERAQALVHGDLHTGSVMVTPDS-TQVIDPEFA 257 (418)
T ss_pred HHhcccceeecCCCCCcEEEcCCC-ceEecchhh
Confidence 455545799999999999999876 888887764
No 499
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=95.31 E-value=0.11 Score=54.79 Aligned_cols=29 Identities=28% Similarity=0.267 Sum_probs=26.0
Q ss_pred CccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 149 ~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.++|+|+.|.||+++.+| +.|+||+++..
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 589999999999999887 78999998764
No 500
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=95.26 E-value=0.22 Score=50.76 Aligned_cols=134 Identities=13% Similarity=0.007 Sum_probs=86.0
Q ss_pred CCceeccCCCCCC--CceEEEEeEECCCCCcEEEEEEeC---CCCc---------h-------hHHHHHHHHH---HHHh
Q 004025 19 LPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISG---TNAQ---------D-------GHLAAARNGV---KRLR 74 (778)
Q Consensus 19 ~~Y~i~~~lg~g~--g~w~Vy~g~~k~~g~~VaIK~~~~---~~~~---------~-------~~~~~~~~ev---~~Lk 74 (778)
.++++.+.+|.|. | .||++.. +|..+|||++.. .... + ....-+.+|. .+|+
T Consensus 37 ~~I~flefLg~g~~~~--~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLk 112 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDG--YVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLK 112 (207)
T ss_pred CcEeeeeecCCCCcee--EEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHH
Confidence 3677888899887 5 7999887 588999999432 1100 0 1122344454 4566
Q ss_pred cCCCCCe--eeEeeeeEecc-c---------ccCCcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHH
Q 004025 75 TVRHPNI--LAFLHSTEVEN-I---------DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVS 142 (778)
Q Consensus 75 ~LrHPnI--lk~~d~~e~e~-~---------~g~~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~ 142 (778)
.+.+.++ +++++++.-.. . ..........||.|++.+=. . ....- +.+|.+-|.
T Consensus 113 e~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------~----~~~~~----~~~~~~dl~ 178 (207)
T PF13095_consen 113 EAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------P----LQIRD----IPQMLRDLK 178 (207)
T ss_pred hccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------c----cchhH----HHHHHHHHH
Confidence 6667777 89988884321 0 00011234568888874311 0 01111 788999999
Q ss_pred HHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 143 FLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 143 fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+| .++|+-+|+++.|.. +| ||+|||.+
T Consensus 179 ~~~-k~gI~~~Dv~~~ny~---~G--~lvDfs~~ 206 (207)
T PF13095_consen 179 ILH-KLGIVPRDVKPRNYR---GG--KLVDFSSS 206 (207)
T ss_pred HHH-HCCeeeccCcccccc---CC--EEEecccC
Confidence 999 599999999999986 33 88999853
Done!