Your job contains 1 sequence.
>004026
MMIPSVWVCDLVFQQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNM
DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV
KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL
EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSST
VTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTD
EPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD
PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQ
HAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV
HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQR
MTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSP
QRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQ
ETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLANGPTSG
NGSNGGSQRVGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004026
(778 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 1923 2.0e-281 2
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 2523 3.2e-262 1
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 1466 3.9e-203 2
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 1943 9.4e-201 1
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 1434 9.8e-196 2
TAIR|locus:2145116 - symbol:HDG7 "AT5G52170" species:3702... 1301 2.5e-186 2
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 1455 4.8e-149 1
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 1010 3.9e-140 2
TAIR|locus:2131814 - symbol:FWA "AT4G25530" species:3702 ... 947 8.4e-121 2
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 1008 1.6e-113 2
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 787 4.4e-109 2
TAIR|locus:2097770 - symbol:HDG8 "AT3G03260" species:3702... 739 2.4e-108 2
TAIR|locus:2167230 - symbol:HDG9 "AT5G17320" species:3702... 985 3.1e-99 1
TAIR|locus:2023932 - symbol:HDG10 "AT1G34650" species:370... 941 1.4e-94 1
TAIR|locus:2182850 - symbol:AT5G07260 "AT5G07260" species... 412 2.3e-47 2
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 166 5.4e-20 3
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 164 1.2e-18 3
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 160 8.3e-18 3
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 155 4.9e-17 3
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 138 2.8e-13 3
TAIR|locus:2116442 - symbol:AT4G26920 "AT4G26920" species... 185 1.9e-10 2
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"... 125 7.1e-07 1
UNIPROTKB|P14839 - symbol:HOXB6 "Homeobox protein Hox-B6"... 122 1.5e-06 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 121 1.9e-06 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 120 2.4e-06 1
UNIPROTKB|B0W1V2 - symbol:abd-A "Homeobox protein abdomin... 134 2.6e-06 1
UNIPROTKB|F8VSA3 - symbol:HOXD8 "Homeobox protein Hox-D8"... 129 2.9e-06 1
UNIPROTKB|F1RSD4 - symbol:PRRX1 "Uncharacterized protein"... 119 3.1e-06 1
RGD|2320224 - symbol:LOC100364841 "rCG53272-like" species... 118 4.0e-06 1
UNIPROTKB|P29552 - symbol:abd-A "Homeobox protein abdomin... 134 4.4e-06 1
FB|FBgn0025334 - symbol:PHDP "Putative homeodomain protei... 131 6.8e-06 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 134 6.9e-06 1
UNIPROTKB|O76762 - symbol:abd-A "Homeobox protein abdomin... 135 7.5e-06 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 133 7.6e-06 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 114 1.1e-05 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 114 1.1e-05 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 114 1.1e-05 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 114 1.1e-05 1
UNIPROTKB|F1RUB4 - symbol:RHOXF1 "Uncharacterized protein... 124 1.1e-05 1
UNIPROTKB|J9P9S0 - symbol:PRRX1 "Uncharacterized protein"... 129 1.1e-05 1
UNIPROTKB|Q643W9 - symbol:Prrx1 "Paired mesoderm homeobox... 129 1.1e-05 1
ZFIN|ZDB-GENE-980528-2060 - symbol:gsc "goosecoid" specie... 130 1.3e-05 1
RGD|2321880 - symbol:LOC100360577 "homeobox A4-like" spec... 125 1.3e-05 1
UNIPROTKB|F1NNC8 - symbol:TLX1 "T-cell leukemia homeobox ... 113 1.4e-05 1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 113 1.4e-05 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 113 1.4e-05 1
UNIPROTKB|D6RBG8 - symbol:PITX2 "Pituitary homeobox 2" sp... 113 1.4e-05 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 129 1.6e-05 1
UNIPROTKB|G3V2N3 - symbol:PRRX1 "Paired mesoderm homeobox... 126 1.6e-05 1
UNIPROTKB|H0YLI9 - symbol:SHOX "Short stature homeobox pr... 128 1.7e-05 1
FB|FBgn0030058 - symbol:CG11294 species:7227 "Drosophila ... 130 1.7e-05 1
UNIPROTKB|H9KZ47 - symbol:HOXB7 "Uncharacterized protein"... 112 1.7e-05 1
UNIPROTKB|P24341 - symbol:HOXD10 "Homeobox protein Hox-D1... 112 1.7e-05 1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 112 1.7e-05 1
UNIPROTKB|H0YJ32 - symbol:SHOX2 "Short stature homeobox p... 122 1.8e-05 1
RGD|1564332 - symbol:Rhox11 "reproductive homeobox 11" sp... 127 1.8e-05 1
UNIPROTKB|A2VE85 - symbol:PRRX1 "Paired related homeobox ... 129 1.8e-05 1
UNIPROTKB|E2RGD6 - symbol:PRRX1 "Uncharacterized protein"... 129 1.8e-05 1
MGI|MGI:97712 - symbol:Prrx1 "paired related homeobox 1" ... 129 1.8e-05 1
RGD|628884 - symbol:Prrx1 "paired related homeobox 1" spe... 129 1.8e-05 1
FB|FBgn0000014 - symbol:abd-A "abdominal A" species:7227 ... 136 1.9e-05 1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd... 111 2.2e-05 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 128 2.7e-05 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 130 2.8e-05 1
RGD|1586210 - symbol:Hoxc4 "homeo box C4" species:10116 "... 110 2.8e-05 1
UNIPROTKB|P18865 - symbol:Hoxc4 "Homeobox protein Hox-C4"... 110 2.8e-05 1
ZFIN|ZDB-GENE-030131-9033 - symbol:prrx1b "paired related... 127 3.1e-05 1
UNIPROTKB|F1NLW0 - symbol:LOC100858514 "Uncharacterized p... 122 3.1e-05 1
UNIPROTKB|G1K361 - symbol:PRRX1 "Paired mesoderm homeobox... 125 3.1e-05 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 129 3.1e-05 1
UNIPROTKB|G3X7M1 - symbol:SHOX "Uncharacterized protein" ... 129 3.5e-05 1
UNIPROTKB|A6NLG4 - symbol:SHOX2 "cDNA FLJ38019 fis, clone... 122 3.6e-05 1
UNIPROTKB|P14838 - symbol:HOXB5 "Homeobox protein Hox-B5"... 109 3.6e-05 1
UNIPROTKB|F1SHT6 - symbol:F1SHT6 "Uncharacterized protein... 109 3.6e-05 1
UNIPROTKB|G3ECA1 - symbol:HoxA10 "Homebox A10" species:98... 109 3.6e-05 1
FB|FBgn0010323 - symbol:Gsc "Goosecoid" species:7227 "Dro... 131 3.9e-05 1
UNIPROTKB|P54821 - symbol:PRRX1 "Paired mesoderm homeobox... 126 4.1e-05 1
UNIPROTKB|F1NPM5 - symbol:GSC "Homeobox protein goosecoid... 126 4.1e-05 1
UNIPROTKB|H0YMR3 - symbol:SHOX "Short stature homeobox pr... 127 4.6e-05 1
UNIPROTKB|F1P8H3 - symbol:HOXD8 "Uncharacterized protein"... 122 4.9e-05 1
UNIPROTKB|O15266 - symbol:SHOX "Short stature homeobox pr... 127 5.1e-05 1
UNIPROTKB|E1BF87 - symbol:PRRX2 "Uncharacterized protein"... 116 5.2e-05 1
UNIPROTKB|H0YIZ3 - symbol:PRRX2 "Paired mesoderm homeobox... 116 5.2e-05 1
UNIPROTKB|G1K2Z3 - symbol:PRRX1 "Paired mesoderm homeobox... 125 5.3e-05 1
UNIPROTKB|Q05437 - symbol:PRRX1 "Paired mesoderm homeobox... 125 5.3e-05 1
ZFIN|ZDB-GENE-990415-105 - symbol:hoxb4a "homeo box B4a" ... 125 5.4e-05 1
UNIPROTKB|J9NTV3 - symbol:GSC2 "Uncharacterized protein" ... 113 5.4e-05 1
UNIPROTKB|F1MJX6 - symbol:HOXA4 "Uncharacterized protein"... 125 5.9e-05 1
UNIPROTKB|F1NC59 - symbol:F1NC59 "Uncharacterized protein... 107 6.0e-05 1
UNIPROTKB|F1NVB2 - symbol:TLX3 "T-cell leukemia homeobox ... 107 6.0e-05 1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"... 107 6.0e-05 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 126 6.4e-05 1
ZFIN|ZDB-GENE-020905-5 - symbol:prrx1a "paired related ho... 124 6.9e-05 1
MGI|MGI:96204 - symbol:Hoxd12 "homeobox D12" species:1009... 125 6.9e-05 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 112 7.0e-05 1
UNIPROTKB|G3MZU0 - symbol:GSC2 "Uncharacterized protein" ... 116 7.1e-05 1
UNIPROTKB|O13004 - symbol:GSC2 "Goosecoid 2" species:9031... 106 7.6e-05 1
RGD|1309797 - symbol:Hoxd12 "homeo box D12" species:10116... 125 7.6e-05 1
UNIPROTKB|Q90VZ9 - symbol:HOXA7 "Homeobox protein Hox-A7"... 122 7.8e-05 1
MGI|MGI:96176 - symbol:Hoxa4 "homeobox A4" species:10090 ... 125 8.1e-05 1
WARNING: Descriptions of 202 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 1923 (682.0 bits), Expect = 2.0e-281, Sum P(2) = 2.0e-281
Identities = 382/533 (71%), Positives = 436/533 (81%)
Query: 246 PADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWI 305
P DFG G LP P + + G+D ++S+ LELAL AMDELVK+AQ++EPLW+
Sbjct: 293 PPDFGGG-GGCLP---PQQQQSTVINGID---QKSVLLELALTAMDELVKLAQSEEPLWV 345
Query: 306 RSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWA 365
+S +G R LN +EY+RTF+ KP G TEASR +GMVIINSLALVETLMD NRW
Sbjct: 346 KSLDGE-RDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALVETLMDSNRWT 401
Query: 366 EMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGV 425
EMFPC +AR TTDVIS GM GT NGALQLM+AELQVLSPLVPVR VNFLRFCKQHAEGV
Sbjct: 402 EMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCKQHAEGV 461
Query: 426 WAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYK 485
WAVVDVSID +RE SG + RRLPSGCVVQD+ NGYSKVTWVEHAEYDE+Q+HQLY+
Sbjct: 462 WAVVDVSIDPVRENSGGAPVI--RRLPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYR 519
Query: 486 PLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNF 545
PL+ SG+GFG+QRW+ATLQRQCECLAIL+S+SV++ D+T+IT GGR+SMLKLAQRMT NF
Sbjct: 520 PLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSITPGGRKSMLKLAQRMTFNF 579
Query: 546 CAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFN 605
C+G+ A +VH W+KL GNVD DVRVMTRKSVDDPGEPPGIVLSAATSVWLP +PQRL++
Sbjct: 580 CSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIVLSAATSVWLPAAPQRLYD 639
Query: 606 FLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTD 665
FLR+ER+R EWDILSNGGPMQEMAHI KGQD G VSLLR++A+NANQSSMLILQETC D
Sbjct: 640 FLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VSLLRSNAMNANQSSMLILQETCID 697
Query: 666 AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXX 725
A+G+LVVYAPVDIPAMHVVMNGGDS+YVALLPSGFA++PDG G
Sbjct: 698 ASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAVLPDGGIDGG--------GSGDGD 749
Query: 726 XXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 778
LLTVAFQILVN+LPTAKLTVESVETVNNLISCTVQKI+AALQCES
Sbjct: 750 QRPVGGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRAALQCES 802
Score = 805 (288.4 bits), Expect = 2.0e-281, Sum P(2) = 2.0e-281
Identities = 167/258 (64%), Positives = 185/258 (71%)
Query: 18 NIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRK 77
N +N GGG G++F+G + RRSRE+ EHESRSGSDN+ PPRK
Sbjct: 85 NNNNVGGG-------GDTFDGSVNRRSREE--EHESRSGSDNVEGISGEDQDAADKPPRK 135
Query: 78 KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLER 137
KRYHRHTPQQIQELES+FKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLER
Sbjct: 136 KRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLER 195
Query: 138 HENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELD 197
HEN+LLRQENDKLRAENMSIR+AMRNPICTNCGGPA++GD+SLEE HLRIENARLKDELD
Sbjct: 196 HENALLRQENDKLRAENMSIREAMRNPICTNCGGPAMLGDVSLEEHHLRIENARLKDELD 255
Query: 198 RVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 257
RVC L GKFLG LEL VGT N G + P DFG G L
Sbjct: 256 RVCNLTGKFLGHHHNHHYNSS-----LELAVGTNNNGGHFA------FPPDFGGG-GGCL 303
Query: 258 PVVMPPNRSGPGVTGLDR 275
P P + + G+D+
Sbjct: 304 P---PQQQQSTVINGIDQ 318
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 2523 (893.2 bits), Expect = 3.2e-262, P = 3.2e-262
Identities = 512/760 (67%), Positives = 594/760 (78%)
Query: 28 QLQRMGESFEGIIGRRSR--EDLLEHESRSGSDNMXXXXXXXXXXXXNP-PRKKRYHRHT 84
++ R GE E + R+S ED+ ESRS SDN P +KKRYHRHT
Sbjct: 62 EMSRNGEIMESNVSRKSSRGEDV---ESRSESDNAEAVSGDDLDTSDRPLKKKKRYHRHT 118
Query: 85 PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 144
P+QIQ+LES+FKEC HPDEKQRL+LS+RL L+ RQVKFWFQNRRTQMKTQ+ERHEN+LLR
Sbjct: 119 PKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLR 178
Query: 145 QENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAG 204
QENDKLRAENMS+R+AMRNP+C NCGGPA+IG+IS+EEQHLRIEN+RLKDELDRVCAL G
Sbjct: 179 QENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQHLRIENSRLKDELDRVCALTG 238
Query: 205 KFLGRXXXXXXXXXXXXXXLELGVGT--INGFGG--LSSTVTTTLPADFGTGISNALPVV 260
KFLGR L +GVG+ N GG LSS + F +V
Sbjct: 239 KFLGRSNGSHHIPDSALV-LGVGVGSGGCNVGGGFTLSSPLLPQASPRFEISNGTGSGLV 297
Query: 261 MPPNRSGP-GVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHE 319
NR P V+ D +RS +L+LALAAMDELVKMAQT EPLW+RS + SG +VLN E
Sbjct: 298 ATVNRQQPVSVSDFD---QRSRYLDLALAAMDELVKMAQTREPLWVRSSD-SGFEVLNQE 353
Query: 320 EYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTD 379
EY +F+ C+G K +GFV+EAS+E G VIINSLALVETLMD RWAEMFP M++RT+TT+
Sbjct: 354 EYDTSFSRCVGPKQDGFVSEASKEAGTVIINSLALVETLMDSERWAEMFPSMVSRTSTTE 413
Query: 380 VISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRET 439
+ISSGMGG RNGAL LMHAELQ+LSPLVPVR+V+FLRFCKQHAEGVWAVVDVSID+IRE
Sbjct: 414 IISSGMGG-RNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREG 472
Query: 440 SGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRW 499
S + +CRRLPSGC+VQDM NGYSKVTW+EH EYDE+ +H+LY+PL+ G+ FGA RW
Sbjct: 473 SSS----SCRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRW 528
Query: 500 VATLQRQCECLAILMSTSVSARDHTA-ITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWN 558
+A LQRQCECL ILMS++VS + + I GR+SMLKLA+RMTDNFC GVCAS++ KW+
Sbjct: 529 MAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMTDNFCGGVCASSLQKWS 588
Query: 559 KLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDI 618
KLN GNVDEDVR+MTRKSV++PGEPPGI+L+AATSVW+PVSP+RLF+FL +ERLRSEWDI
Sbjct: 589 KLNVGNVDEDVRIMTRKSVNNPGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEWDI 648
Query: 619 LSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDI 678
LSNGGPM+EMAHIAKG D N VSLLRASAINANQSSMLILQET DAAG++VVYAPVDI
Sbjct: 649 LSNGGPMKEMAHIAKGHDRSNSVSLLRASAINANQSSMLILQETSIDAAGAVVVYAPVDI 708
Query: 679 PAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVA 738
PAM VMNGGDSAYVALLPSGFAI+P+G A LLTVA
Sbjct: 709 PAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEERNSIGNGGCMEEGGS-LLTVA 767
Query: 739 FQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 778
FQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL C+S
Sbjct: 768 FQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 807
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 1466 (521.1 bits), Expect = 3.9e-203, Sum P(2) = 3.9e-203
Identities = 290/501 (57%), Positives = 381/501 (76%)
Query: 278 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 337
++ + +ELA+AAM+ELV+MAQT +PLW+ S + S ++LN EEY RTF IG KP G
Sbjct: 247 DKPIIVELAVAAMEELVRMAQTGDPLWL-STDNSV-EILNEEEYFRTFPRGIGPKPLGLR 304
Query: 338 TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 397
+EASR++ +VI+N + LVE LMD N+W+ +F +++R T +V+S+G+ G NGALQ+M
Sbjct: 305 SEASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMT 364
Query: 398 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVV 457
AE QV SPLVP RE F+R+CKQH++G WAVVDVS+D++R ++ P + RR PSGC++
Sbjct: 365 AEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPST--P-ILRTRRRPSGCLI 421
Query: 458 QDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS 517
Q++PNGYSKVTW+EH E D+ VH +YKPL+ SG+ FGA+RWVATL+RQCE LA M+++
Sbjct: 422 QELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMASN 481
Query: 518 VSARDHTAITAG-GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKS 576
+ D + IT+ GR+SMLKLA+RM +FC+GV AST H W ++ D DVRVMTRKS
Sbjct: 482 IPG-DLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSD-DVRVMTRKS 539
Query: 577 VDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQD 636
+DDPG PPGIVLSAATS W+PV+P+R+F+FLRDE R EWDILSNGG +QEMAHIA G +
Sbjct: 540 MDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEWDILSNGGMVQEMAHIANGHE 599
Query: 637 HGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALL 696
GNCVSLLR ++ N++QS+MLILQE+CTDA+GS V+YAPVDI AM+VV++GGD YVALL
Sbjct: 600 PGNCVSLLRVNSGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYVALL 659
Query: 697 PSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESV 756
PSGFAI+PDG G LLTVAFQILV+S+PTAKL++ SV
Sbjct: 660 PSGFAILPDGSVGGGD--GNQHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGSV 717
Query: 757 ETVNNLISCTVQKIKAALQCE 777
TVN+LI CTV++IKAA+ C+
Sbjct: 718 ATVNSLIKCTVERIKAAVSCD 738
Score = 522 (188.8 bits), Expect = 3.9e-203, Sum P(2) = 3.9e-203
Identities = 101/174 (58%), Positives = 128/174 (73%)
Query: 38 GIIGRRSREDLLEHESRSGSDNMXXXXXXXXXX--XXNPPRKKRYHRHTPQQIQELESLF 95
GI G SRED + E++SG++ P +KKRYHRHT +QIQELES F
Sbjct: 26 GITG--SRED--DFETKSGTEVTTENPSGEELQDPSQRPNKKKRYHRHTQRQIQELESFF 81
Query: 96 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 155
KECPHPD+KQR ELS+ L LE QVKFWFQN+RTQMK Q ERHEN +L+ +NDKLRAEN
Sbjct: 82 KECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHENQILKSDNDKLRAENN 141
Query: 156 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR 209
++A+ N C NCGGPA IG++S +EQHLRIENARL++E+DR+ A+A K++G+
Sbjct: 142 RYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGK 195
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 1943 (689.0 bits), Expect = 9.4e-201, P = 9.4e-201
Identities = 409/763 (53%), Positives = 529/763 (69%)
Query: 38 GIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXN--PPRKKRYHRHTPQQIQELESLF 95
GI G S E+ + E++SG++ N P +KKRYHRHT +QIQELES F
Sbjct: 26 GITG--SHEE--DFETKSGAEVTMENPLEEELQDPNQRPNKKKRYHRHTQRQIQELESFF 81
Query: 96 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 155
KECPHPD+KQR ELS+ L LE QVKFWFQN+RTQMK Q ERHEN +L+ ENDKLRAEN
Sbjct: 82 KECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKAQHERHENQILKSENDKLRAENN 141
Query: 156 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRXXXXXX 215
+DA+ N C NCGGPA IG++S +EQHLRIENARL++E+DR+ A+A K++G+
Sbjct: 142 RYKDALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLMANS 201
Query: 216 XXXXXXXX--------LELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSG 267
L+L VG FG +++ T + FG+ S+ L V P+ +
Sbjct: 202 SSFPQLSSSHHIPSRSLDLEVGN---FGNNNNSHTGFVGEMFGS--SDILRSVSIPSEA- 255
Query: 268 PGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTP 327
++ M +ELA+AAM+ELV+MAQT +PLW+ S + ++LN EEY RTF
Sbjct: 256 ----------DKPMIVELAVAAMEELVRMAQTGDPLWVSS--DNSVEILNEEEYFRTFPR 303
Query: 328 CIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGG 387
IG KP G +EASRE+ +VI+N + L+E LMD N+W+ +F +++R T +V+S+G+ G
Sbjct: 304 GIGPKPIGLRSEASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAG 363
Query: 388 TRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVN 447
NGALQ+M AE QV SPLVP RE F+R+CKQH++G+WAVVDVS+D++R + P
Sbjct: 364 NYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPS---P-ITR 419
Query: 448 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQC 507
RR PSGC++Q++ NGYSKVTWVEH E D+ VH +YKPL+ +G+ FGA+RWVATL RQC
Sbjct: 420 SRRRPSGCLIQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQC 479
Query: 508 ECLAILMSTSVSARDHTAITAG-GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVD 566
E LA M++++ A D + IT+ GR+SMLKLA+RM +FC GV AST H W L+ D
Sbjct: 480 ERLASSMASNIPACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSTTGSD 539
Query: 567 EDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQ 626
DVRVMTRKS+DDPG PPGIVLSAATS W+PV+P+R+F+FLRDE RSEWDILSNGG +Q
Sbjct: 540 -DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGLVQ 598
Query: 627 EMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMN 686
EMAHIA G+D GN VSLLR ++ N+ QS+MLILQE+CTDA+GS V+YAPVDI AM+VV++
Sbjct: 599 EMAHIANGRDPGNSVSLLRVNSGNSGQSNMLILQESCTDASGSYVIYAPVDIIAMNVVLS 658
Query: 687 GGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXX------------XXXXXXXXXL 734
GGD YVALLPSGFAI+PDG +RG L
Sbjct: 659 GGDPDYVALLPSGFAILPDG-SARGGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSL 717
Query: 735 LTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCE 777
LTVAFQILV+S+PTAKL++ SV TVN+LI CTV++IKAAL C+
Sbjct: 718 LTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACD 760
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 1434 (509.9 bits), Expect = 9.8e-196, Sum P(2) = 9.8e-196
Identities = 292/517 (56%), Positives = 376/517 (72%)
Query: 263 PNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYL 322
PN +T S ++ + ++L++AAM+EL++M Q DEPLW +S VL+ EEY
Sbjct: 231 PNDLLKSITAPTES-DKPVIIDLSVAAMEELMRMVQVDEPLW-KSL------VLDEEEYA 282
Query: 323 RTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVIS 382
RTF IG +P G+ +EASRE+ +VI+N + +VE LMD N+W+ +F M++R T V+S
Sbjct: 283 RTFPRGIGPRPAGYRSEASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLS 342
Query: 383 SGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA 442
+G+ G NGALQ+M AE QV SPLVP RE F R+CKQ +G WAVVD+S+D+++
Sbjct: 343 TGVAGNYNGALQVMSAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNP-- 400
Query: 443 PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVAT 502
PA CRR SGC++Q++PNGYSKVTWVEH E D+ VH LYK ++ +G FGA+RWVA
Sbjct: 401 PA--RCRRRASGCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAI 458
Query: 503 LQRQCECLAILMSTSVSARDHTAIT-AGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLN 561
L RQCE LA +M+T++S+ + IT GRRSMLKLA+RM +FCAGV AST H W L+
Sbjct: 459 LDRQCERLASVMATNISSGEVGVITNQEGRRSMLKLAERMVISFCAGVSASTAHTWTTLS 518
Query: 562 AGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSN 621
G EDVRVMTRKSVDDPG PPGIVLSAATS W+PV P+R+F+FLRDE R+EWDILSN
Sbjct: 519 -GTGAEDVRVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEWDILSN 577
Query: 622 GGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAM 681
GG +QEMAHIA G+D GNCVSLLR ++ N++QS+MLILQE+CTD S V+YAPVDI AM
Sbjct: 578 GGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAM 637
Query: 682 HVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQI 741
++V+NGGD YVALLPSGFAI+PDG + G LLTVAFQI
Sbjct: 638 NIVLNGGDPDYVALLPSGFAILPDGNANSG--------------APGGDGGSLLTVAFQI 683
Query: 742 LVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 778
LV+S+PTAKL++ SV TVNNLI+CTV++IKA++ CE+
Sbjct: 684 LVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCET 720
Score = 484 (175.4 bits), Expect = 9.8e-196, Sum P(2) = 9.8e-196
Identities = 114/274 (41%), Positives = 156/274 (56%)
Query: 45 REDLLEH-ESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELESLFKECPHPDE 103
R+D + ++SGS+N +P +KKRYHRHT QIQE+E+ FKECPHPD+
Sbjct: 33 RDDEFDSPNTKSGSENQEGGSGNDQDPL-HPNKKKRYHRHTQLQIQEMEAFFKECPHPDD 91
Query: 104 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 163
KQR +LS+ L LE QVKFWFQN+RTQMK ERHENS LR EN+KLR +N+ R+A+ N
Sbjct: 92 KQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALAN 151
Query: 164 PICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRXXXXXXXXX---XX 220
C NCGGP IG++S +E LR+ENARL++E+DR+ A+A K++G+
Sbjct: 152 ASCPNCGGPTAIGEMSFDEHQLRLENARLREEIDRISAIAAKYVGKPVSNYPLMSPPPLP 211
Query: 221 XXXLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERS 280
LEL +G I G +G ++ L + P S V +D S+
Sbjct: 212 PRPLELAMGNIGGEA-------------YGNNPNDLLKSITAPTESDKPVI-IDLSVAAM 257
Query: 281 MFLELALAAMDE-LVKMAQTDEPLWIRSF-EGSG 312
L + + +DE L K DE + R+F G G
Sbjct: 258 EEL-MRMVQVDEPLWKSLVLDEEEYARTFPRGIG 290
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 1301 (463.0 bits), Expect = 2.5e-186, Sum P(2) = 2.5e-186
Identities = 254/435 (58%), Positives = 322/435 (74%)
Query: 341 SRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAEL 400
SRETG+V+INSLALVETLMD N+WAEMF C++A +T +VIS+G G+RNG++ LM AE
Sbjct: 258 SRETGLVLINSLALVETLMDTNKWAEMFECIVAVASTLEVISNGSDGSRNGSILLMQAEF 317
Query: 401 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDM 460
QV+SPLVP+++ FLR+CKQH +G+WAVVDVS D R ++ + PSGC++QD+
Sbjct: 318 QVMSPLVPIKQKKFLRYCKQHGDGLWAVVDVSYDINRGNENLKSYGGSKMFPSGCIIQDI 377
Query: 461 PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA 520
NG SKVTW+EH+EY+ES H LY+PL+ S +G GA +W+ATLQRQCE +L+S+
Sbjct: 378 GNGCSKVTWIEHSEYEESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLLSSE--- 434
Query: 521 RDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDP 580
DHT ++ G +S+LKLAQRM NF +G+ AS +HKW KL A NV +D R++TRKS+
Sbjct: 435 -DHTGLSHAGTKSILKLAQRMKLNFYSGITASCIHKWEKLLAENVGQDTRILTRKSL--- 490
Query: 581 GEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNC 640
EP GIVLSAATS+WLPV+ QRLF FL D + R++WDILSNG M+ + KGQ G+C
Sbjct: 491 -EPSGIVLSAATSLWLPVTQQRLFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGSC 549
Query: 641 VSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGF 700
VSLLRA+ + N+SSMLILQET D +G+LVVYAPVDIP+M+ VM+GGDSAYVALLPSGF
Sbjct: 550 VSLLRAAGNDQNESSMLILQETWNDVSGALVVYAPVDIPSMNTVMSGGDSAYVALLPSGF 609
Query: 701 AIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVN 760
+I+PDG S LLTV FQILVNSLPTAKL VESVETVN
Sbjct: 610 SILPDGSSS-----SSDQFDTDGGLVNQESKGCLLTVGFQILVNSLPTAKLNVESVETVN 664
Query: 761 NLISCTVQKIKAALQ 775
NLI+CT+ KI+AAL+
Sbjct: 665 NLIACTIHKIRAALR 679
Score = 528 (190.9 bits), Expect = 2.5e-186, Sum P(2) = 2.5e-186
Identities = 104/190 (54%), Positives = 135/190 (71%)
Query: 25 GDLQLQRMGESFEG--IIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKR--- 79
GDL++ F +G+ ++D E ESRS SD+ P+KK+
Sbjct: 3 GDLEVDMSRGDFNPSFFLGKL-KDD--EFESRSLSDDSFDAMSGDEDKQEQRPKKKKRKT 59
Query: 80 -YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERH 138
YHRHT QIQELES FKECPHP+EKQRLEL K+L LE++Q+KFWFQNRRTQMKTQLERH
Sbjct: 60 KYHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERH 119
Query: 139 ENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDR 198
EN +L+QEN+KLR EN ++++MR +C +CGG I G++S E+ LRIENA+LK+ELDR
Sbjct: 120 ENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEELDR 179
Query: 199 VCALAGKFLG 208
+CALA +F+G
Sbjct: 180 ICALANRFIG 189
Score = 89 (36.4 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
Identities = 57/226 (25%), Positives = 95/226 (42%)
Query: 103 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQE-NDKLRAENMSIR--- 158
++QR + KR R + Q + K H N R E KL E+ I+
Sbjct: 48 QEQRPKKKKRKTKYHRHTSYQIQELESFFKEC--PHPNEKQRLELGKKLTLESKQIKFWF 105
Query: 159 DAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDEL-DRVCALAGKFL--GRXXXXXX 215
R + T + + E + LR+EN+ LK+ + +C G + G
Sbjct: 106 QNRRTQMKTQLERHENV-ILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQH 164
Query: 216 XXXXXXXXLELGVGTINGFGG--LSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 273
L+ + I + +++ P++ G G S LP+ G V+G
Sbjct: 165 QLRIENAKLKEELDRICALANRFIGGSISLEQPSNGGIG-SQHLPI-------GHCVSG- 215
Query: 274 DRSIERSMFLELALAAMDELVKMAQTDEPLWI-RSFEGSGRQVLNH 318
S+ MF++LA+ AMDEL+K+A+ + LW +S +GS +NH
Sbjct: 216 GTSL---MFMDLAMEAMDELLKLAELETSLWSSKSEKGS----MNH 254
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 1455 (517.2 bits), Expect = 4.8e-149, P = 4.8e-149
Identities = 311/642 (48%), Positives = 420/642 (65%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+KKRYHRHT QQIQ LES FKECPHPDEKQR +LS+ L L RQ+KFWFQNRRTQ+K Q
Sbjct: 32 KKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQH 91
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 195
ER +NS L+ ENDK+R EN++IR+A+++ IC NCGGP + D +EQ LRIENA L++E
Sbjct: 92 ERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPVSEDPYFDEQKLRIENAHLREE 151
Query: 196 LDRVCALAGKFLGRXXXXXXXXXXXXXX-LELGVGTINGFGGLSSTVTTTLPADFGTGIS 254
L+R+ +A K++GR L+L + ++ G G +L D G S
Sbjct: 152 LERMSTIASKYMGRPISQLSTLHPMHISPLDLSMTSLTGCGPFGHG--PSLDFDLLPGSS 209
Query: 255 NALPVVMPPN--RSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 312
A V P N +S P + D +++ + +AL AM+EL+++ QT+EPLW R+ +G
Sbjct: 210 MA---VGPNNNLQSQPNLAISD--MDKPIMTGIALTAMEELLRLLQTNEPLWTRT-DGC- 262
Query: 313 RQVLNHEEYLRTFTPCIGLKPN-GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 371
R +LN Y F N F EASR +G+V +N++ALV+ MD +W E+FP +
Sbjct: 263 RDILNLGSYENVFPRSSNRGKNQNFRVEASRSSGIVFMNAMALVDMFMDCVKWTELFPSI 322
Query: 372 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 431
IA + T VISSGMGGT GAL L++ E++VLSPLV RE LR+C+Q +G W VV+V
Sbjct: 323 IAASKTLAVISSGMGGTHEGALHLLYEEMEVLSPLVATREFCELRYCQQTEQGSWIVVNV 382
Query: 432 SIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQ-VHQLYKPLIIS 490
S D + S + ++ R PSGC++QDMPNGYSKVTWVEH E +E + VH+LY+ +I
Sbjct: 383 SYDLPQFVSHSQSY----RFPSGCLIQDMPNGYSKVTWVEHIETEEKELVHELYREIIHR 438
Query: 491 GMGFGAQRWVATLQRQCECLAILMSTSVSARD--HTAITAGGRRSMLKLAQRMTDNFCAG 548
G+ FGA RWV TLQR CE A L + S+RD ++ G+RSM++LAQRM N+C
Sbjct: 439 GIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLS 498
Query: 549 VCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLR 608
V S + ++ N + +RV KS P EP G VL AAT+ WLP SPQ +FNFL+
Sbjct: 499 VSRSNNTRSTVVSELN-EVGIRVTAHKS---P-EPNGTVLCAATTFWLPNSPQNVFNFLK 553
Query: 609 DERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSS-MLILQETCTDAA 667
DER R +WD+LSNG +QE+AHI+ G GNC+S+LR S NA S+ MLILQE+ TD++
Sbjct: 554 DERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLRGS--NATHSNNMLILQESSTDSS 611
Query: 668 GSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDS 709
G+ VVY+PVD+ A+++ M+G D +Y+ LL SGF I PDG S
Sbjct: 612 GAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDGNGS 653
Score = 1125 (401.1 bits), Expect = 4.5e-114, P = 4.5e-114
Identities = 255/550 (46%), Positives = 344/550 (62%)
Query: 237 LSSTVTTTLPADFGTGIS---NALP---VVMPPNRSGPGVTGLDRS-IERSMFLELALAA 289
LS T T FG G S + LP + + PN + L S +++ + +AL A
Sbjct: 183 LSMTSLTGC-GPFGHGPSLDFDLLPGSSMAVGPNNNLQSQPNLAISDMDKPIMTGIALTA 241
Query: 290 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPN-GFVTEASRETGMVI 348
M+EL+++ QT+EPLW R+ +G R +LN Y F N F EASR +G+V
Sbjct: 242 MEELLRLLQTNEPLWTRT-DGC-RDILNLGSYENVFPRSSNRGKNQNFRVEASRSSGIVF 299
Query: 349 INSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVP 408
+N++ALV+ MD +W E+FP +IA + T VISSGMGGT GAL L++ E++VLSPLV
Sbjct: 300 MNAMALVDMFMDCVKWTELFPSIIAASKTLAVISSGMGGTHEGALHLLYEEMEVLSPLVA 359
Query: 409 VREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVT 468
RE LR+C+Q +G W VV+VS D + S + ++ R PSGC++QDMPNGYSKVT
Sbjct: 360 TREFCELRYCQQTEQGSWIVVNVSYDLPQFVSHSQSY----RFPSGCLIQDMPNGYSKVT 415
Query: 469 WVEHAEYDESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD--HTA 525
WVEH E +E + VH+LY+ +I G+ FGA RWV TLQR CE A L + S+RD
Sbjct: 416 WVEHIETEEKELVHELYREIIHRGIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVI 475
Query: 526 ITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPG 585
++ G+RSM++LAQRM N+C V S + ++ N + +RV KS P EP G
Sbjct: 476 LSPEGKRSMMRLAQRMISNYCLSVSRSNNTRSTVVSELN-EVGIRVTAHKS---P-EPNG 530
Query: 586 IVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 645
VL AAT+ WLP SPQ +FNFL+DER R +WD+LSNG +QE+AHI+ G GNC+S+LR
Sbjct: 531 TVLCAATTFWLPNSPQNVFNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLR 590
Query: 646 ASAINANQSS-MLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP 704
S NA S+ MLILQE+ TD++G+ VVY+PVD+ A+++ M+G D +Y+ LL SGF I P
Sbjct: 591 GS--NATHSNNMLILQESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISP 648
Query: 705 DGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLIS 764
DG S L+TV FQI+V++LPTAKL +ESVETVNNLI
Sbjct: 649 DGNGSNSEQGGASTSSGRASASGS-----LITVGFQIMVSNLPTAKLNMESVETVNNLIG 703
Query: 765 CTVQKIKAAL 774
TV +IK AL
Sbjct: 704 TTVHQIKTAL 713
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 1010 (360.6 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
Identities = 207/445 (46%), Positives = 285/445 (64%)
Query: 271 TGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIG 330
TG + + + +ELA AM+EL+ MAQ EPLW+ F G+ LN +EY +TF +G
Sbjct: 239 TGPADANTKPIIMELAFGAMEELLVMAQVAEPLWMGGFNGTSL-ALNLDEYEKTFRTGLG 297
Query: 331 LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRN 390
+ GF TEASRET +V + +VE LM N W+ MF ++ R T + I + G N
Sbjct: 298 PRLGGFRTEASRETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFN 357
Query: 391 GALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRR 450
G LQ+M AE QVLSPLV RE F+R+CKQ EG+WAVVD+SID + + CRR
Sbjct: 358 GNLQIMSAEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHLLPNIN----LKCRR 413
Query: 451 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL 510
PSGC++Q+M +GYSKVTWVEH E D++ + +++ LI +G F A RWV TL RQCE +
Sbjct: 414 RPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERI 473
Query: 511 AILMST---SVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDE 567
+ ++ST SV + DH +T G+ SMLK+A+R+ F AG+ +T + + +G E
Sbjct: 474 SSILSTDFQSVDSGDHITLTNHGKMSMLKIAERIARTFFAGMTNAT---GSTIFSGVEGE 530
Query: 568 DVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQE 627
D+RVMT KSV+DPG+PPG+++ AATS WLP P +F+FLR+ R WD+L NG M +
Sbjct: 531 DIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPNTVFDFLREATHRHNWDVLCNGEMMHK 590
Query: 628 MAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNG 687
+A I G D NC SLLR + ++S M+I+QET TD S V+YAPVD+ +M + ++G
Sbjct: 591 IAEITNGIDKRNCASLLRHG--HTSKSKMMIVQETSTDPTASFVLYAPVDMTSMDITLHG 648
Query: 688 G-DSAYVALLPSGFAIVPDGPDSRG 711
G D +V +LPSGFAI PDG G
Sbjct: 649 GGDPDFVVILPSGFAIFPDGTGKPG 673
Score = 382 (139.5 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
Identities = 83/192 (43%), Positives = 114/192 (59%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+KK+Y+RHT QI E+E+ F+ECPHPD+KQR +LS +L L+ Q+KFWFQN+RTQ K Q
Sbjct: 68 KKKKYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQ 127
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 195
ER ENS LR N+ LR+EN +R+A+ +C CGG IG+++ EE HLRI NARL +E
Sbjct: 128 ERFENSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTEE 187
Query: 196 LDRVCALAGKFLGRXXXXXXXXXXXXX------XLELGVGTINGFGGLSSTVTTTLPADF 249
+ ++ A K + R E G+G+ G S TT PAD
Sbjct: 188 IKQLSVTAEK-ISRLTGIPVRSHPRVSPPNPPPNFEFGMGSKGNVGNHSRE--TTGPAD- 243
Query: 250 GTGISNALPVVM 261
+N P++M
Sbjct: 244 ----ANTKPIIM 251
Score = 228 (85.3 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 54/130 (41%), Positives = 76/130 (58%)
Query: 650 NANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGG-DSAYVALLPSGFAIVPDGPD 708
+ ++S M+I+QET TD S V+YAPVD+ +M + ++GG D +V +LPSGFAI PDG
Sbjct: 611 HTSKSKMMIVQETSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTG 670
Query: 709 SRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQ 768
G LLT++FQ+LV S P A+L+V SV T NLI TV+
Sbjct: 671 KPG----------------GKEGGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTVR 714
Query: 769 KIKAALQCES 778
+IK C++
Sbjct: 715 RIKDLFPCQT 724
>TAIR|locus:2131814 [details] [associations]
symbol:FWA "AT4G25530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEP] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009909 "regulation of flower development" evidence=IEP;RCA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009911
"positive regulation of flower development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AL022197 EMBL:AL161563
Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009911 GO:GO:0031047 HOGENOM:HOG000243256
GO:GO:0006349 EMBL:AF178688 EMBL:AF243535 IPI:IPI00545721
PIR:A85295 RefSeq:NP_567722.1 UniGene:At.2139
ProteinModelPortal:Q9FVI6 SMR:Q9FVI6 IntAct:Q9FVI6 STRING:Q9FVI6
PaxDb:Q9FVI6 PRIDE:Q9FVI6 EnsemblPlants:AT4G25530.1 GeneID:828658
KEGG:ath:AT4G25530 TAIR:At4g25530 eggNOG:NOG295539
InParanoid:Q9FVI6 PhylomeDB:Q9FVI6 Genevestigator:Q9FVI6
GermOnline:AT4G25530 Uniprot:Q9FVI6
Length = 686
Score = 947 (338.4 bits), Expect = 8.4e-121, Sum P(2) = 8.4e-121
Identities = 204/457 (44%), Positives = 294/457 (64%)
Query: 262 PPNRSGPGVTG---LD-----RSIER--SMFLELALAAMDELVKMAQTDEPLWIRSFEGS 311
P + S PG+ LD R+ E+ S+FL LA+ A+ EL+ + + D P W+
Sbjct: 183 PSSSSNPGINATPVLDFSGGTRTSEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVR 242
Query: 312 GRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPC 370
+ V +E+Y +F KP G + EASR G+V + + LV+TLMD +W +F
Sbjct: 243 SKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAP 300
Query: 371 MIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVD 430
++ +T V+S+G GGT++G+LQ + AE QV+SPLVP R+V F+R+CK+ +G+W VVD
Sbjct: 301 IVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVD 360
Query: 431 VSIDTIRETSGAPAFVNC-RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLII 489
V+ T T P C +RLPSG ++ D+ NGYS+VTW+E AEY+ES +HQLY+PLI
Sbjct: 361 VT-PTQNPTL-LP--YGCSKRLPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIG 416
Query: 490 SGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGV 549
G+G GA+RW+ATLQR CE L+ L ST+++ ++A G ++KLAQRMT N+ G+
Sbjct: 417 YGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS-PGLSAKGATEIVKLAQRMTLNYYRGI 475
Query: 550 CASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRD 609
+ +V KW K+ NV +++ M RK+V++PGE GIVLSA+TSVWLPV+ LF F+
Sbjct: 476 TSPSVDKWQKIQVENVAQNMSFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISH 535
Query: 610 ERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGS 669
R EWDIL+N M+E I K + HGN +SLL+ +N + ML+LQE DA+G+
Sbjct: 536 LSFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLKI--VN---NGMLVLQEIWNDASGA 590
Query: 670 LVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDG 706
+VVYAPV+ ++ +V G +S V LPSGF+IVPDG
Sbjct: 591 MVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDG 627
Score = 262 (97.3 bits), Expect = 8.4e-121, Sum P(2) = 8.4e-121
Identities = 55/123 (44%), Positives = 71/123 (57%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
R +R HR T Q QELE+ + E PHP E+QR EL +RL + QVK WFQN+R K
Sbjct: 40 RMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINN 99
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 195
+ EN LR+E+D+L A +R AM +C CG GD E Q L ENA L+ E
Sbjct: 100 DHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLERE 159
Query: 196 LDR 198
+D+
Sbjct: 160 IDQ 162
Score = 182 (69.1 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 49/132 (37%), Positives = 71/132 (53%)
Query: 647 SAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDG 706
S + + ML+LQE DA+G++VVYAPV+ ++ +V G +S V LPSGF+IVPDG
Sbjct: 568 SLLKIVNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDG 627
Query: 707 PDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLISCT 766
+ LLT QILV PTA L +V++V L++ T
Sbjct: 628 VNG-------------SYHRGNTGGGCLLTFGLQILVGINPTAALIQGTVKSVETLMAHT 674
Query: 767 VQKIKAALQCES 778
+ KIK+AL ++
Sbjct: 675 IVKIKSALDLQT 686
Score = 38 (18.4 bits), Expect = 3.7e-97, Sum P(2) = 3.7e-97
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 180 LEEQHLRIENARLKDELDRVCA 201
+ HL EN L++E DR+ A
Sbjct: 97 INNDHL--ENVTLREEHDRLLA 116
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 1008 (359.9 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 204/442 (46%), Positives = 296/442 (66%)
Query: 277 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT--PCIGLKPN 334
+++S+ +A+ AM+EL+++ QT+EPLWI++ +G R VLN E Y FT G K N
Sbjct: 208 MDKSLMTNIAVTAMEELLRLLQTNEPLWIKT-DGC-RDVLNLENYENMFTRSSTSGGKKN 265
Query: 335 GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQ 394
EASR +G+V N++ LV+ LM+ + E+FP ++A + T VISSG+ G AL
Sbjct: 266 NLGMEASRSSGVVFTNAITLVDMLMNSVKLTELFPSIVASSKTLAVISSGLRGNHGDALH 325
Query: 395 LMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSG 454
LM ELQVLSPLV RE LR+C+Q G WA+V+VS + + S + ++ R PSG
Sbjct: 326 LMIEELQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSYEFPQFISQSRSY----RFPSG 381
Query: 455 CVVQDMPNGYSKVTWVEHAEYDESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAIL 513
C++QDM NGYSKVTWVEH E++E + +H+++K ++ G+ FGA+RW+ATLQR CE L
Sbjct: 382 CLIQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNL 441
Query: 514 MSTSVSARDHTAITAG--GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDE-DVR 570
+ + S+ D + G+RS+++LA RM NFC V T + +DE +R
Sbjct: 442 LEPATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSV--GTSNNTRSTVVSGLDEFGIR 499
Query: 571 VMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAH 630
V + KS EP G+VL AATS WLP+SPQ +FNFL+DER R +WD+LSNG +QE+AH
Sbjct: 500 VTSHKSRH---EPNGMVLCAATSFWLPISPQNVFNFLKDERTRPQWDVLSNGNSVQEVAH 556
Query: 631 IAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGS-LVVYAPVDIPAMHVVMNGGD 689
I G + GNC+S+LR +++Q++MLILQE+C D++ + LV+Y PVD+PA+++ M+G D
Sbjct: 557 ITNGSNPGNCISVLRGFNASSSQNNMLILQESCIDSSSAALVIYTPVDLPALNIAMSGQD 616
Query: 690 SAYVALLPSGFAIVPDGPDSRG 711
++Y+ +LPSGFAI PDG S+G
Sbjct: 617 TSYIPILPSGFAISPDG-SSKG 637
Score = 726 (260.6 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 165/361 (45%), Positives = 226/361 (62%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+KKR+HRHTP QIQ LES F EC HPDEKQR +LS+ L L RQ+KFWFQNRRTQ K Q
Sbjct: 21 KKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQKKAQH 80
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 195
ER +N L++ENDK+R EN++IR+A+++ IC +CG + D +EQ LRIENA+L+DE
Sbjct: 81 ERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDSYFDEQKLRIENAQLRDE 140
Query: 196 LDRVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPADFGTGISN 255
L+RV ++A KFLGR + V + F S LP G+ S
Sbjct: 141 LERVSSIAAKFLGRPISHLPPLLN-----PMHVSPLELFHTGPSLDFDLLP---GSCSSM 192
Query: 256 ALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQV 315
++P +P S P + L +++S+ +A+ AM+EL+++ QT+EPLWI++ +G R V
Sbjct: 193 SVPS-LP---SQPNLV-LSE-MDKSLMTNIAVTAMEELLRLLQTNEPLWIKT-DGC-RDV 244
Query: 316 LNHEEYLRTFT--PCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 373
LN E Y FT G K N EASR +G+V N++ LV+ LM+ + E+FP ++A
Sbjct: 245 LNLENYENMFTRSSTSGGKKNNLGMEASRSSGVVFTNAITLVDMLMNSVKLTELFPSIVA 304
Query: 374 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 433
+ T VISSG+ G AL LM ELQVLSPLV RE LR+C+Q G WA+V+VS
Sbjct: 305 SSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSY 364
Query: 434 D 434
+
Sbjct: 365 E 365
Score = 132 (51.5 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 734 LLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 778
L+TV FQI+V+ L AKL +ES+ETVNNLI+ TV +IK L C S
Sbjct: 641 LITVGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTLNCPS 685
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 787 (282.1 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 178/434 (41%), Positives = 264/434 (60%)
Query: 278 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 337
E+++ +ELA++ EL KM +EPLW + + LN EEY + F + + F
Sbjct: 232 EKAIDMELAVSCARELAKMCDINEPLWNKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFR 291
Query: 338 TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 397
EASR ++++N + LV+ +D ++W+EMF +++ T +ISSG G +G L LM
Sbjct: 292 REASRANAVIMLNCITLVKAFLDADKWSEMFFPIVSSAKTAQIISSGASGP-SGTLLLMF 350
Query: 398 AELQVLSPLVPVREVNFLRFCKQHAE-GVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCV 456
AELQV+SPLVP RE FLR+ +Q+AE G W VVD ID I+ S A RR PSGC+
Sbjct: 351 AELQVVSPLVPTREAYFLRYVEQNAEEGKWMVVDFPIDRIKPAS-ATTTDQYRRKPSGCI 409
Query: 457 VQDMPNGYSKVTWVEHAEYDESQVH-QLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 515
+Q M NGYS+VTWVEH E +E V ++ + + SG+ FGA+RW++ L+RQCE +A LM+
Sbjct: 410 IQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFGAERWLSVLKRQCERMASLMA 469
Query: 516 TSVSARDHTAI-TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTR 574
T+++ D I + R++++KL+QRM FC + S H + V++++R
Sbjct: 470 TNIT--DLGVIPSVEARKNLMKLSQRMVKTFCLNIINS--H-----GQAPTKDTVKIVSR 520
Query: 575 KSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKG 634
K G+V A + LP S Q++F+ LRD + S+ +IL G QE+AHIA G
Sbjct: 521 KVCG------GLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANG 574
Query: 635 QDHGNCVSLLRASA-INANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYV 693
GN +SLLR + N++ + L+LQETCTD +GSL+VY+ VD A+ + MNG D + +
Sbjct: 575 SHLGNSISLLRINVESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEI 634
Query: 694 ALLPSGFAIVPDGP 707
LLP GF++VP P
Sbjct: 635 PLLPVGFSVVPVNP 648
Score = 311 (114.5 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 72/168 (42%), Positives = 97/168 (57%)
Query: 35 SFEGIIGRRSREDLLEHESRSG-SDNMXXXXXXXXXXXXNPP--RKKRYHRHTPQQIQEL 91
+F I + E + + ES SG S PP +KKRYHRHT QIQ++
Sbjct: 44 NFPYIFPKEEYEVMSKIESGSGKSTGSGHDPVENTAIEQEPPAAKKKRYHRHTASQIQQM 103
Query: 92 ESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR 151
E+LFKE HPD K RL LSK+L L QVKFWFQN+RTQ+K Q R +N+ L+ EN+ L+
Sbjct: 104 EALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLK 163
Query: 152 AENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRV 199
E+ +I+ + C+ CG +LR+ENARL+ ELDR+
Sbjct: 164 TESQNIQSNFQCLFCSTCG------------HNLRLENARLRQELDRL 199
Score = 308 (113.5 bits), Expect = 9.2e-52, Sum P(2) = 9.2e-52
Identities = 76/191 (39%), Positives = 111/191 (58%)
Query: 585 GIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLL 644
G+V A + LP S Q++F+ LRD + S+ +IL G QE+AHIA G GN +SLL
Sbjct: 525 GLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANGSHLGNSISLL 584
Query: 645 RASA-INANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIV 703
R + N++ + L+LQETCTD +GSL+VY+ VD A+ + MNG D + + LLP GF++V
Sbjct: 585 RINVESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSVV 644
Query: 704 PDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLI 763
P P S G LLTVA Q+L +++ T +L + +V +N+ I
Sbjct: 645 PVNP-SDG-----------VEGSSVSSPSCLLTVAIQVLGSNVTTERLDLSTVSVINHRI 692
Query: 764 SCTVQKIKAAL 774
TV +I +AL
Sbjct: 693 CATVNRITSAL 703
Score = 50 (22.7 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 137 RHENSLLRQENDKLRAENMSIRDAMRNP 164
R EN+ LRQE D+LR SI +MRNP
Sbjct: 186 RLENARLRQELDRLR----SIV-SMRNP 208
Score = 47 (21.6 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 232 NGFGGLSSTVTTTLP-ADFGTGISNA-LPVVMP 262
N FG +SS+ TTT+ ++ T N P + P
Sbjct: 18 NVFGSVSSSPTTTIQNPNYFTSFENPNFPYIFP 50
>TAIR|locus:2097770 [details] [associations]
symbol:HDG8 "AT3G03260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 EMBL:AC012328
EMBL:AK117867 IPI:IPI00538783 RefSeq:NP_186976.2 UniGene:At.41007
ProteinModelPortal:Q9M9P4 SMR:Q9M9P4 PRIDE:Q9M9P4
EnsemblPlants:AT3G03260.1 GeneID:821305 KEGG:ath:AT3G03260
TAIR:At3g03260 InParanoid:Q9M9P4 OMA:LNMESVA PhylomeDB:Q9M9P4
Genevestigator:Q9M9P4 Uniprot:Q9M9P4
Length = 699
Score = 739 (265.2 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 175/519 (33%), Positives = 287/519 (55%)
Query: 278 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIG-LKPNGF 336
+ S+ E+A +A++EL ++ +E W++S V++ E Y R F+ +
Sbjct: 207 DMSLLSEIAASAVEELKRLFLAEEQFWVKSCIDE-TYVIDTESYER-FSHAVKHFSSTTA 264
Query: 337 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRN-GALQL 395
E+S+ +V + ++ L++ +DP +W E+FP ++ + T V+ SG+ N LQ+
Sbjct: 265 HVESSKAVTVVHVEAINLIQMFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCNVLQV 324
Query: 396 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 455
M +L +LSPLVP RE +R C++ +G+W + DVS + A C + PSGC
Sbjct: 325 MWEQLHILSPLVPAREFMVVRCCQEIEKGIWIIADVSHRANFDFGNAA----CYKRPSGC 380
Query: 456 VVQDMPNGYSKVTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 514
++Q +P+ +SKV W+EH E D H++Y+ L+ G G+GA+RW+ TL+R CE +A+
Sbjct: 381 LIQALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALSS 440
Query: 515 STSVSARDHT-AITAG-GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDED-VRV 571
++ D + IT G RRS++KL +RM NF + S K++ ++ VRV
Sbjct: 441 IQTLPPSDRSEVITTGEARRSVMKLGERMVKNFNEMLTMS-----GKIDFPQQSKNGVRV 495
Query: 572 MTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHI 631
R +++ G+PPGIV+SA++S+ +P++P ++F FL++ R +WDILS G + E+A I
Sbjct: 496 SIRMNIE-AGQPPGIVVSASSSLAIPLTPLQVFAFLQNLDTRQQWDILSYGTVVNEIARI 554
Query: 632 AKGQDHGNCVSLLRASAINANQSSMLILQETCTD-----------AAGSLVVYAPVDIPA 680
G NCV++LR + + +++Q++C D A G ++VYAP+D+
Sbjct: 555 VTGSSETNCVTILRVHPTHEENNDKMVVQDSCKDDMLMLQDCYMDALGGMIVYAPMDMAT 614
Query: 681 MHVVMNGG-DSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAF 739
MH ++G D +++ +LPSGF I DG S LLTVAF
Sbjct: 615 MHFAVSGEVDPSHIPILPSGFVISSDGRRS-----------------TVEDGGTLLTVAF 657
Query: 740 QILVNSLPTAKLTV--ESVETVNNLISCTVQKIKAALQC 776
QILV+ V +SV+TV+ LIS T+Q+IK L C
Sbjct: 658 QILVSGKANRSREVNEKSVDTVSALISSTIQRIKGLLNC 696
Score = 352 (129.0 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 68/124 (54%), Positives = 88/124 (70%)
Query: 77 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 136
K+ HRHTPQQIQ LE+ FKECPHPDE+QR +L + L LE Q+KFWFQN+RTQ KTQ +
Sbjct: 24 KRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCRELKLEPDQIKFWFQNKRTQSKTQED 83
Query: 137 RHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE-QHLRIENARLKDE 195
R N LLR EN+ L+++N ++ DA+++ +C CGGP + Q LR ENARLKD
Sbjct: 84 RSTNVLLRGENETLQSDNEAMLDALKSVLCPACGGPPFGREERGHNLQKLRFENARLKDH 143
Query: 196 LDRV 199
DR+
Sbjct: 144 RDRI 147
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 256/728 (35%), Positives = 382/728 (52%)
Query: 73 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
N KK YHRHT +QI LE+ FKECPHPDE QR L + L L+ +Q+KFWFQN+RTQ K
Sbjct: 23 NRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLKPKQIKFWFQNKRTQAK 82
Query: 133 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE-QHLRIENAR 191
+ E+ +N+ LR EN K+R EN S+ DA+ N +C CGG + L Q LR +NA
Sbjct: 83 SHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGGRGPGREDQLRHLQKLRAQNAY 142
Query: 192 LKDELDRVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPAD--- 248
LKDE +RV ++ G T L T + LP
Sbjct: 143 LKDEYERVSNYLKQYGGHSMHNVEATPYLHGPSN-HASTSKNRPALYGTSSNRLPEPSSI 201
Query: 249 F-GTGISNALPVVMPPNRSGP-GVTGLD--RSIERSMFLELALAAMDELVKMAQTDEPLW 304
F G + PP P + +E+ LE A A+ E++ + Q D+ +W
Sbjct: 202 FRGPYTRGNMNTTAPPQPRKPLEMQNFQPLSQLEKIAMLEAAEKAVSEVLSLIQMDDTMW 261
Query: 305 IRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 364
+S R V++ Y + FT NG E+S++ +V +++ L++ + +W
Sbjct: 262 KKS-SIDDRLVIDPGLYEKYFTKT---NTNGR-PESSKDVVVVQMDAGNLIDIFLTAEKW 316
Query: 365 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 424
A +FP ++ T V+ S + ++++ +L +LSPLVP RE LR C+Q +
Sbjct: 317 ARLFPTIVNEAKTIHVLDS-VDHRGKTFSRVIYEQLHILSPLVPPREFMILRTCQQIEDN 375
Query: 425 VWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV--HQ 482
VW + DVS + +F C + PSG ++Q +P+G+SKVTW+EH ++++V H+
Sbjct: 376 VWMIADVSCH-LPNIEFDLSFPICTKRPSGVLIQALPHGFSKVTWIEHVVVNDNRVRPHK 434
Query: 483 LYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA---RDHTAI--TAGGRRSMLKL 537
LY+ L+ G G+GA+RW TL+R CE L + STSV A D+ + T GR S++ L
Sbjct: 435 LYRDLLYGGFGYGARRWTVTLERTCERL--IFSTSVPALPNNDNPGVVQTIRGRNSVMHL 492
Query: 538 AQRMTDNFCAGVCASTVHKWNKLNAGNVDED----VRVMTRKSVDDPGEPPGIVLSAATS 593
+RM NF A + NKL+ E +R+ R + ++ G+PPG+++ A +S
Sbjct: 493 GERMLRNF-----AWMMKMVNKLDFSPQSETNNSGIRIGVRIN-NEAGQPPGLIVCAGSS 546
Query: 594 VWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQ 653
+ LP+ P ++++FL++ +R +WD+L +G P E A G + N VS L S + N
Sbjct: 547 LSLPLPPVQVYDFLKNLEVRHQWDVLCHGNPATEAARFVTGSNPRNTVSFLEPSIRDIN- 605
Query: 654 SSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGG-DSAYVALLPSGFAIVPDGPDSRGP 712
+ ++ILQ++ DA G +V YAP+D+ ++G D + +LPSGF I DG S G
Sbjct: 606 TKLMILQDSFKDALGGMVAYAPMDLNTACAAISGDIDPTTIPILPSGFMISRDGRPSEGE 665
Query: 713 LAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNS---LPTAKLTVESVETVNNLISCTVQK 769
LLTVAFQILV+ P L V S TVN LIS TVQ+
Sbjct: 666 --------------AEGGSYTLLTVAFQILVSGPSYSPDTNLEV-SATTVNTLISSTVQR 710
Query: 770 IKAALQCE 777
IKA L+CE
Sbjct: 711 IKAMLKCE 718
>TAIR|locus:2023932 [details] [associations]
symbol:HDG10 "AT1G34650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 EMBL:AC007894 EMBL:AC023279
IPI:IPI00526139 PIR:B86470 RefSeq:NP_174724.1 UniGene:At.51941
ProteinModelPortal:Q9S9Z0 SMR:Q9S9Z0 EnsemblPlants:AT1G34650.1
GeneID:840369 KEGG:ath:AT1G34650 TAIR:At1g34650 InParanoid:Q9S9Z0
PhylomeDB:Q9S9Z0 ProtClustDB:CLSN2679643 Genevestigator:Q9S9Z0
Uniprot:Q9S9Z0
Length = 708
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 239/716 (33%), Positives = 372/716 (51%)
Query: 79 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERH 138
R H H+ Q+Q LE+ F ECPHPD+ QR +L L L+ +Q+KFWFQNRRTQ + E+
Sbjct: 20 RRH-HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQARIHNEKA 78
Query: 139 ENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDR 198
+N LR EN K+R N ++ A+ +C CGGP + Q LR +N LK E +R
Sbjct: 79 DNIALRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLCNLQKLRTKNVILKTEYER 138
Query: 199 VCALAGKFLGRXXXXXXXXXXXXXXLELGVGTIN---GFGGLSSTV---TTTLPADFGTG 252
+ + K G G + N +G S+ + ++ L F
Sbjct: 139 LSSYLTKHGGYSIPSVDALPDLHGPSTYGSTSNNRPASYGSSSNHLPQQSSLLRRPFTRE 198
Query: 253 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 312
+ N P+ P L + +E++ E+A A+ E++ + Q + +WI+S G
Sbjct: 199 LINTTPLPKPVLLQH--FQQLSQ-LEKNRMFEIAKNAVAEVMSLIQMEHSMWIKSTI-DG 254
Query: 313 RQVLNHEEYLRTFTPCIGLKPNGFVT---EASRETGMVIINSLALVETLMDPNRWAEMFP 369
R +++ Y R FT LK + E+S E +V +++ LV+ ++ +WA +FP
Sbjct: 255 RAIIDPGNYKRYFTKNSHLKSRSALQSHHESSMEVVVVQMDARNLVDMFLNTEKWARLFP 314
Query: 370 CMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVV 429
++ T V+ S M R ++++ +L +LSPLV RE LR C+Q E +W +
Sbjct: 315 TIVTEAKTIHVLDS-MDHPRQTFSRVVYEQLHILSPLVLPREFIILRTCQQMKEDLWLIA 373
Query: 430 DVS--IDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKP 486
DVS + + S AP C + PSG ++Q +P+G SKVTW+EH E D+ HQLY+
Sbjct: 374 DVSCYLQNVEFESTAPI---CTKRPSGVLIQALPHGRSKVTWIEHVEVTDKVWPHQLYRD 430
Query: 487 LIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI--TAGGRRSMLKLAQRMTDN 544
L+ G G+GA+RW ATLQR CE L++ T D+ + T GRRS++ L +RM N
Sbjct: 431 LLYGGFGYGARRWTATLQRMCERLSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERMLKN 490
Query: 545 FCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLF 604
F + S + + N + VR+ R + + G+PPG+++ A +S+ LP+ P +++
Sbjct: 491 FAWIMKMSDKLDLPQQSGAN-NSGVRISVRTNTE-AGQPPGLIVCAGSSLSLPLPPLQVY 548
Query: 605 NFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCT 664
+FLR+ +R +WD+ G P+ E A G D N V+ L+ S++ + ++ILQ+
Sbjct: 549 DFLRNLEVRHQWDVHCQGNPVTEAARFVTGPDQKNNVTFLQPSSVG--EYKLMILQDGFI 606
Query: 665 DAAGSLVVYAPVDIPAMHVVMNGG-DSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXX 723
DA G +VVYAP+++ + ++G D + + +LPSGF I D S +
Sbjct: 607 DALGGMVVYAPMNLNTAYSAISGQVDPSTIPILPSGFIISRDSHPSSSEV---------- 656
Query: 724 XXXXXXXXXXLLTVAFQILVN--SLPTAKLTVESVETVNNLISCTVQKIKAALQCE 777
LLT+AFQI V S T +S TVN L+S VQ+IKA L CE
Sbjct: 657 ----DGGSMTLLTLAFQIFVTGPSYYTDLNLKDSATTVNTLVSSAVQRIKAMLNCE 708
>TAIR|locus:2182850 [details] [associations]
symbol:AT5G07260 "AT5G07260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] INTERPRO:IPR002913 EMBL:CP002688
GenomeReviews:BA000015_GR Pfam:PF01852 PROSITE:PS50848
EMBL:BT003974 EMBL:BT005131 IPI:IPI00531581 RefSeq:NP_196343.2
UniGene:At.23335 ProteinModelPortal:Q84JD1 PaxDb:Q84JD1
EnsemblPlants:AT5G07260.1 GeneID:830617 KEGG:ath:AT5G07260
TAIR:At5g07260 HOGENOM:HOG000147055 InParanoid:Q84JD1
PhylomeDB:Q84JD1 ProtClustDB:CLSN2686056 ArrayExpress:Q84JD1
Genevestigator:Q84JD1 Uniprot:Q84JD1
Length = 541
Score = 412 (150.1 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 113/393 (28%), Positives = 189/393 (48%)
Query: 316 LNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIART 375
LN +EY P GFV E SR + V ++ +LV LM+ W ++FP +IA
Sbjct: 120 LNLDEYYSKLFPWYARNAPGFVHEVSRASAFVPCDASSLVANLMNHVSWQKIFPSIIADV 179
Query: 376 ATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT 435
+ + S G + + M +SPL+ R V LR + + WA+ ++S+
Sbjct: 180 S----VESQQRGLQKINVNFMPQ----ISPLIQTRNVKLLRRSRHIEDDTWAIAEISMYF 231
Query: 436 IRETSGA-PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGF 494
P ++ R PSG ++Q + NG SKVT ++H Y E + + S F
Sbjct: 232 SSYAQHLRPEYM---RFPSGYLIQHIANGISKVTILDHWVYKEEEGMNTFN----SNSEF 284
Query: 495 GAQRWVATLQRQC--ECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCAS 552
GAQRW+ LQ+ C + S + + I R+++L L+ M + FC+GVC
Sbjct: 285 GAQRWLTALQKHYYNTCPVSIPSIGHNIQIFDQIC---RKNLLNLSSFMVNVFCSGVCGI 341
Query: 553 TVHKWNKLNAGNVD-EDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDER 611
T +WN+LN V ++R+ T++S G P +++SA + P+ +F +
Sbjct: 342 TGQRWNRLNTVGVSANNIRMFTQESRGMSGIPC-VLVSATGLARMHTKPEVMFGLINGAE 400
Query: 612 LRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLV 671
+ W L + M+E+ I + + N VS+ + + ++QET D +G+++
Sbjct: 401 KQEIWSYLESAKDMKELIRIGRHPNSWNEVSVFSIEWKGSKE--WYLIQETYYDESGAMI 458
Query: 672 VYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP 704
++ V+ P +NGGD + V LLPSGF I+P
Sbjct: 459 IHTCVEAPYFAAAINGGDLSGVELLPSGFTIIP 491
Score = 114 (45.2 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 143 LRQENDKLRAENMSIRDAMRNP-ICTNCGGPAIIGDISLEEQHLRIENARLKDELD 197
L Q+ND LRAEN + AM +P IC +C P I S EE+ L +ENARL+ E+D
Sbjct: 11 LHQQNDLLRAENRARIHAMTSPSICRSCEEPII----STEERELWLENARLRSEID 62
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 166 (63.5 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 71/293 (24%), Positives = 128/293 (43%)
Query: 340 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 399
A+R G+V + + + E L D W C+ T +VI +G GGT ++L++ +
Sbjct: 215 AARACGLVSLEPMKVAEILKDRPSWFRDCRCV----ETLNVIPTGNGGT----IELVNTQ 266
Query: 400 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCV 456
+ + L R+ LR+ +G + V + S+ + P +FV + L SG +
Sbjct: 267 IYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGFL 326
Query: 457 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 516
++ G S + V+H + D S V ++ +PL S + VA L+ + I T
Sbjct: 327 IRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHVRQ---IAQET 383
Query: 517 SVSARDHTAITAGGRR-SMLK-LAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTR 574
S + +GGR+ ++L+ +QR+ F V W+ +++ ED+ +M
Sbjct: 384 SGEVQ-----YSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDG-GEDITIMIN 437
Query: 575 KSVDD-----------PGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEW 616
S P G++ + A+ + V P L FLR+ R +EW
Sbjct: 438 SSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHR--AEW 488
Score = 157 (60.3 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 79 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR---LC-LETRQVKFWFQNRRTQMKTQ 134
+Y R+TP+Q++ LE ++ ECP P +R +L + LC +E RQ+K WFQNRR + K
Sbjct: 21 KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREK-- 78
Query: 135 LERHENSLLRQENDKLRAEN 154
+R E++ L+ N KL A N
Sbjct: 79 -QRKESARLQTVNRKLSAMN 97
Score = 49 (22.3 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 24/112 (21%), Positives = 46/112 (41%)
Query: 671 VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP-D---GPDSRGPLAXXXXXXXXXXXX 726
+V+AP+D + D A LLPSGF ++P D P+ +
Sbjct: 576 LVFAPID-------ESFADDA--PLLPSGFRVIPLDQKTNPNDHQSASRTRDLASSLDGS 626
Query: 727 XXXXXXX----LLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 774
+LT+AFQ ++ + + + V N++ ++Q++ A+
Sbjct: 627 TKTDSETNSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVVG-SIQRVALAI 677
Score = 43 (20.2 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 510 LAILMSTSVSARD---HTAITAGGRRSML----KLAQRMTDNFCAGVCASTV 554
L +L +T V+ +D + GRR++ K+ Q+ N AG+C S++
Sbjct: 756 LDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVSSM 807
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 164 (62.8 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 75/311 (24%), Positives = 134/311 (43%)
Query: 330 GLKPN----GFVTEASRETGMVIINSLALVETLMDPNRWAEMF---PCMIARTATTDVIS 382
G+KP G V + TG + + LV +DP R AE+ PC + + D+++
Sbjct: 184 GMKPGPDSIGIVAISHGCTG-IAARACGLVG--LDPTRVAEILKDKPCWLRDCRSLDIVN 240
Query: 383 SGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG- 441
+ G L+L++ +L + L P R+ LR+ +G + + S++ +
Sbjct: 241 V-LSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSM 299
Query: 442 --APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRW 499
+P FV LPSG +++ G S + V+H + + V ++ + L S +
Sbjct: 300 PPSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTT 359
Query: 500 VATLQRQCECLAILMSTSVSARDHTAITAGGRR--SMLKLAQRMTDNFCAGVCASTVHKW 557
+A L+ + +S +S + +T GRR ++ L+QR++ F V + W
Sbjct: 360 MAALRYLRQ-----ISQEISQPN---VTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGW 411
Query: 558 NKLNAGNVDE--------DVRVMTRKSVDDPG---EPPGIVLSAATSVWLP-VSPQRLFN 605
+ L + +D+ ++M S+ P VL A S+ L V P L
Sbjct: 412 SILESDGIDDVTLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLR 471
Query: 606 FLRDERLRSEW 616
FLR+ R EW
Sbjct: 472 FLREHR--QEW 480
Score = 148 (57.2 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 79 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 133
+Y R+TP+Q++ LE L+ +CP P +R +L + C +E +Q+K WFQNRR + K
Sbjct: 15 KYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 72
Query: 134 QLERHENSLLRQENDKLRAEN 154
+R E S L+ N KL A N
Sbjct: 73 --QRKEASRLQAVNRKLTAMN 91
Score = 47 (21.6 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 659 LQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRG 711
+ E ++ L+ +AP+D + D A ++PSGF I+P S G
Sbjct: 556 VDENAVESCAELI-FAPIDA-------SFSDDA--PIIPSGFRIIPLDSKSEG 598
Score = 41 (19.5 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 256 ALPVVMPPNRSGPGVTGLDRSIERSMFLEL 285
+LP+ P + G + L +IE F+E+
Sbjct: 499 SLPIPRPGSFGGQVILPLAHTIENEEFMEV 528
Score = 39 (18.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 741 ILVNSLPTAKLTVESVETVNNLIS 764
+LVNS PT + S+ N S
Sbjct: 424 LLVNSSPTKMMMTSSLPFANGYTS 447
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 160 (61.4 bits), Expect = 8.3e-18, Sum P(3) = 8.3e-18
Identities = 75/300 (25%), Positives = 130/300 (43%)
Query: 334 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 393
+G A+R G+V + + E + D W C +V+ + GGT +
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEIVKDRPSWFR--ECRAVEVM--NVLPTANGGT----V 251
Query: 394 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 450
+L++ +L + L P R+ LR+ +G V + S+ + + P FV
Sbjct: 252 ELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEM 311
Query: 451 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL 510
L SG +++ G S + V+H + + V ++ +PL S + +A L RQ + +
Sbjct: 312 LSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAAL-RQLKQI 370
Query: 511 AILMSTSVSARDHTAITAGGRR--SMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDED 568
A V+ + ++++ GRR ++ L+QR++ F V T W+ + G+ +D
Sbjct: 371 A----QEVT-QTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI--GDSMDD 423
Query: 569 VRVMTRKSVDD---------PGEPP--GIVLSAATSVWLP-VSPQRLFNFLRDERLRSEW 616
V + S D G P +VL A S+ L V P L FLR+ R SEW
Sbjct: 424 VTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHR--SEW 481
Score = 145 (56.1 bits), Expect = 8.3e-18, Sum P(3) = 8.3e-18
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 79 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 133
+Y R+TP+Q++ LE L+ +CP P +R +L + C +E +Q+K WFQNRR + K
Sbjct: 17 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 74
Query: 134 QLERHENSLLRQENDKLRAEN 154
+R E S L+ N KL A N
Sbjct: 75 --QRKEASRLQAVNRKLTAMN 93
Score = 65 (27.9 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 30/120 (25%), Positives = 50/120 (41%)
Query: 77 KKRYHR-HTPQQIQELESLFKECP---HPDEKQ-RLELSKRLCLETRQV---KFWFQNRR 128
++ YH P I+ + L +ECP + + KQ ++ R C E ++ + NR+
Sbjct: 30 ERLYHDCPKPSSIRR-QQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRK 88
Query: 129 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC----TNCGGPAIIGDISLEEQH 184
+L EN L+++ +L EN R NP T+C G L Q+
Sbjct: 89 LTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAKDTSCESVVTSGQHQLASQN 148
Score = 46 (21.3 bits), Expect = 8.3e-18, Sum P(3) = 8.3e-18
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 628 MAHIAKGQDHGNCVSL--LRASAINANQSSMLILQETCT----DAAGSL--VVYAPVDIP 679
+AH + ++ + L L S +A + L + C+ +A G+ +++AP+D
Sbjct: 514 LAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDA- 572
Query: 680 AMHVVMNGGDSAYVALLPSGFAIVP 704
+ D A LLPSGF I+P
Sbjct: 573 ------SFADDA--PLLPSGFRIIP 589
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 155 (59.6 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 74/293 (25%), Positives = 125/293 (42%)
Query: 340 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 399
A+R G+V + + + E L D W C T + VI +G GGT ++L++ +
Sbjct: 219 AARACGLVSLEPMKVAEILKDRPSWLR--DCRSVDTLS--VIPAGNGGT----IELIYTQ 270
Query: 400 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE-TSGAPA--FVNCRRLPSGCV 456
+ + L R+ LR+ +G + V + S+ + +G P+ FV PSG +
Sbjct: 271 MYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFVRAEMKPSGFL 330
Query: 457 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 516
++ G S + V+H + D V ++ +PL S + VA L+ + I T
Sbjct: 331 IRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHVRQ---IAQET 387
Query: 517 SVSARDHTAITAGGRR-SMLK-LAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTR 574
S + GGR+ ++L+ +QR+ F V W+ + + EDV VM
Sbjct: 388 SGEVQ-----YGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGA-EDVTVMIN 441
Query: 575 KSVDD-----------PGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEW 616
S P G++ + A+ + V P L FLR+ R SEW
Sbjct: 442 LSPGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHR--SEW 492
Score = 144 (55.7 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 79 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 133
+Y R+TP+Q++ LE ++ ECP P +R +L + C +E +Q+K WFQNRR + K
Sbjct: 25 KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 82
Query: 134 QLERHENSLLRQENDKLRAEN 154
+R E + L+ N KL A N
Sbjct: 83 --QRKEAARLQTVNRKLNAMN 101
Score = 45 (20.9 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 671 VVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVP 704
+V+AP+D + D A LLPSGF I+P
Sbjct: 580 LVFAPID-------ESFADDA--PLLPSGFRIIP 604
Score = 40 (19.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 314 QVLNHEEYLRTFTPCIGLKPNG--FVTEASR------ETGMVIINSLALVETLMDPNRWA 365
Q+ NH + + C LK N T A++ ET +V + + L +TL +P R A
Sbjct: 738 QLWNHSDAIL----CCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKA 793
Score = 39 (18.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 510 LAILMSTSVSARD---HTAITAGGRRSML----KLAQRMTDNFCAGVCASTV 554
L +L +T V+ +D + GR+++ K+ Q+ + AGVCAS++
Sbjct: 767 LDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCASSM 818
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 138 (53.6 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 79 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL----ETRQVKFWFQNRRTQMKTQ 134
+Y R+T +Q++ LE ++ ECP P +R +L + + E +Q+K WFQNRR + K
Sbjct: 25 KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDK-- 82
Query: 135 LERHENSLLRQENDKLRAEN 154
+R E S L+ N KL A N
Sbjct: 83 -QRKEASRLQSVNRKLSAMN 101
Score = 130 (50.8 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 69/286 (24%), Positives = 116/286 (40%)
Query: 340 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 399
A+R G+V + + + E L D W C T + +G GGT ++L++ +
Sbjct: 206 AARACGLVSLEPMKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYMQ 257
Query: 400 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR---ETSGAPAFVNCRRLPSGCV 456
+ L P R+ LR+ G + V + S+ + A FV L SG +
Sbjct: 258 TYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYL 317
Query: 457 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 516
++ G S + V+H + V + +PL S AQ+ + R LA
Sbjct: 318 IRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVV-AQKMTISALRYIRQLA----- 371
Query: 517 SVSARDHTAITAGGRRSMLK-LAQRMTDNFCAGVCASTVHKWNKLNA-GNVDEDVRVMTR 574
+ G + ++L+ +QR++ F V W+ ++ G D V + +
Sbjct: 372 -QESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINST 430
Query: 575 KSVDDPGEPP---GIVLSAATSVWLP-VSPQRLFNFLRDERLRSEW 616
K +++ G VL A S+ L V P L FLR+ R SEW
Sbjct: 431 KHLNNISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHR--SEW 474
Score = 40 (19.1 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 695 LLPSGFAIVP 704
L+PSGF ++P
Sbjct: 577 LVPSGFRVIP 586
Score = 38 (18.4 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 690 SAYVALLPSGFAIVPDG 706
S + L+ GFA +P G
Sbjct: 782 SDFAKLMQQGFACLPSG 798
>TAIR|locus:2116442 [details] [associations]
symbol:AT4G26920 "AT4G26920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR002913 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0003677 Pfam:PF01852
PROSITE:PS50848 HOGENOM:HOG000147055 IPI:IPI00519973 PIR:D85312
RefSeq:NP_194422.1 UniGene:At.54524 ProteinModelPortal:Q9M0J8
STRING:Q9M0J8 PaxDb:Q9M0J8 PRIDE:Q9M0J8 EnsemblPlants:AT4G26920.1
GeneID:828799 KEGG:ath:AT4G26920 TAIR:At4g26920 eggNOG:NOG311290
OMA:WIIADIS PhylomeDB:Q9M0J8 ArrayExpress:Q9M0J8
Genevestigator:Q9M0J8 Uniprot:Q9M0J8
Length = 461
Score = 185 (70.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 72/301 (23%), Positives = 138/301 (45%)
Query: 283 LELALAAM-DELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEAS 341
L + LA + +E++ +A + PLW RS ++L EY F P FV EAS
Sbjct: 64 LWVVLACIVNEIIALATLESPLWRRS---QREEMLTLNEYYSRFFPWYAKNVPRFVHEAS 120
Query: 342 RETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE-L 400
R + ++ +++ L+ L +P RW +FP ++ + I S R ++ E L
Sbjct: 121 RASEVIHVDASWLLTKLKNPMRWVTIFPSLVGNVS----IESSNDDVR----MIIDMEFL 172
Query: 401 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA-PAFVNCRRLPSGCVVQD 459
+++P++P R+V LR+C + A W + D+S+ + P F+ R PSG +++
Sbjct: 173 TLITPVIPTRKVKVLRYCHRIANDTWIIADISMYLSSYSDDLRPEFL---RFPSGFIIKH 229
Query: 460 MPNGYSKVTWVEHAEYDESQVHQLYKPLIISGM-G-FGAQ-RWVATLQRQCECLAILMST 516
+ + +VT + + Q + + SG G G + RW+ +R ++ L S
Sbjct: 230 VARIF-RVT-NSAGKNNLLQASKRLVHIFCSGTCGVIGNRGRWLGAGRRFDVRVSSLESR 287
Query: 517 SVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKS 576
+ + I+A G + + + GV +H +L+ ++ + +R+ TR
Sbjct: 288 DMIRHPYGIISASGL-TKIHAKPEILFPLIYGVKKLEIHNHLRLSGNDLKQVLRI-TRDD 345
Query: 577 V 577
+
Sbjct: 346 I 346
Score = 177 (67.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 53/192 (27%), Positives = 100/192 (52%)
Query: 520 ARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDD 579
AR + G+ ++L+ ++R+ FC+G C ++ L AG DVRV + +S D
Sbjct: 231 ARIFRVTNSAGKNNLLQASKRLVHIFCSGTCGVIGNRGRWLGAGR-RFDVRVSSLESRDM 289
Query: 580 PGEPPGIVLSAATSVWLPVSPQRLFNFLRD-ERLRSEWDILSNGGPMQEMAHIAKGQ-DH 637
P GI+ SA+ + P+ LF + ++L + +G ++++ I +
Sbjct: 290 IRHPYGII-SASGLTKIHAKPEILFPLIYGVKKLEIHNHLRLSGNDLKQVLRITRDDITS 348
Query: 638 GNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLP 697
N VSL + +N N + + +LQE +A+ S+V+++ +D+ ++ ++NG D +Y P
Sbjct: 349 RNDVSLF-SFRLN-NSTEVFLLQEAYNEASSSMVIHSILDVSSLAKIING-DRSYSFTYP 405
Query: 698 SGFAIVPDGPDS 709
GF I+P G +S
Sbjct: 406 CGFTIMP-GQNS 416
Score = 40 (19.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 139 ENSLLRQENDKLRAENMSIRDAMRN 163
EN++ R +N+ L A M + D RN
Sbjct: 29 ENAVSRSDNETLNAFTMLL-DFWRN 52
Score = 40 (19.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 18/85 (21%), Positives = 40/85 (47%)
Query: 113 LCLETRQVKFWFQNRRTQMKTQLERHEN-------SLLRQENDKLRAENMSIRDA----- 160
+ L T + W +++R +M T E + ++ R ++ RA + DA
Sbjct: 76 IALATLESPLWRRSQREEMLTLNEYYSRFFPWYAKNVPRFVHEASRASEVIHVDASWLLT 135
Query: 161 -MRNPICTNCGGPAIIGDISLEEQH 184
++NP+ P+++G++S+E +
Sbjct: 136 KLKNPMRWVTIFPSLVGNVSIESSN 160
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 125 (49.1 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 35 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 93
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 94 -HKLPNTKMRSSN 105
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R+ R +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 6 PARRGR-QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKK 64
Query: 134 QLERHENSLLRQENDKLRAE 153
+ + +S L E ++ AE
Sbjct: 65 ENKLLSSSQLSAEEEEKTAE 84
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 121 (47.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 10 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKD 68
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA 173
+ N+ +R N + ++ I A + GPA
Sbjct: 69 -HKLPNTKIRS-NPSSSSASLQIPPAASQ---SRSSGPA 102
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 120 (47.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/95 (36%), Positives = 49/95 (51%)
Query: 41 GRRSREDLLEHESRSG---SDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELESLFKE 97
GR++ + E E RSG SD+ + PRK+R T +QI+ELE+ F
Sbjct: 1 GRQALSPV-ETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAH 58
Query: 98 CPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
+ +R E++ L L RQVK WFQNRR + K
Sbjct: 59 HNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 93
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR++ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR ++K +
Sbjct: 42 PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 101
Query: 135 L----ERHENSLL-RQENDKLRAENMSIRDAMRN 163
L E +E + R+E DK++ N S++ A ++
Sbjct: 102 LRAVKEINEQARREREEQDKMK--NDSLKSAQQH 133
>UNIPROTKB|F8VSA3 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC009336 IPI:IPI01018181
HGNC:HGNC:5139 ProteinModelPortal:F8VSA3 SMR:F8VSA3
Ensembl:ENST00000548663 ArrayExpress:F8VSA3 Bgee:F8VSA3
Uniprot:F8VSA3
Length = 186
Score = 129 (50.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/143 (30%), Positives = 66/143 (46%)
Query: 4 PSVWVCDLVFQQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMXXX 63
P+ + C ++QP Q +L +S G IG ED +H ++S S +
Sbjct: 29 PTYYDCHFAPERQPIFTTQQEAELVQYPDCKSSSGNIG----EDP-DHLNQSSSPSQMFP 83
Query: 64 XXXXXXXXXNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 123
P R++ ++ Q ELE F P+ K+R+E+S L L RQVK W
Sbjct: 84 WMRPQAA---PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIW 140
Query: 124 FQNRRTQMKTQLERHENSLLRQE 146
FQNRR + K + + + + RQE
Sbjct: 141 FQNRRMKWKKENNKDKFPVSRQE 163
>UNIPROTKB|F1RSD4 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
Length = 141
Score = 119 (46.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 76 RKKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
RK+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 14 RKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR- 72
Query: 134 QLERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 73 ---RNERAMLANKNASLLKSYSGDVTAVEQPI 101
>RGD|2320224 [details] [associations]
symbol:LOC100364841 "rCG53272-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:2320224 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00959398 Ensembl:ENSRNOT00000035489 Uniprot:F1M524
Length = 96
Score = 118 (46.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 76 RKKRYHRH--------TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNR 127
R++R+ RH T Q++E+E+LF+E P+PD R EL++ L + +VK WF NR
Sbjct: 4 RRRRHRRHRRSSPYLFTQWQVEEMENLFEETPYPDVLTRGELARTLNVPEVKVKVWFSNR 63
Query: 128 RTQMKTQLER 137
R + + R
Sbjct: 64 RAKQRKNERR 73
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 134 (52.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR++ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR ++K +
Sbjct: 20 PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 79
Query: 135 L----ERHENSLL-RQENDKLRAENMSIRDAMRN 163
L E +E + R+E DK++ N S++ A ++
Sbjct: 80 LRAVKEINEQARREREEQDKMK--NDSLKSAQQH 111
>FB|FBgn0025334 [details] [associations]
symbol:PHDP "Putative homeodomain protein" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
GeneTree:ENSGT00700000104256 FlyBase:FBgn0025334 EMBL:BT028839
RefSeq:NP_523834.1 UniGene:Dm.5689 SMR:Q9W1H7 IntAct:Q9W1H7
MINT:MINT-1561397 STRING:Q9W1H7 EnsemblMetazoa:FBtr0072224
GeneID:37788 KEGG:dme:Dmel_CG11182 UCSC:CG11182-RA CTD:37788
InParanoid:Q9W1H7 OMA:YKLRANE GenomeRNAi:37788 NextBio:805410
Uniprot:Q9W1H7
Length = 220
Score = 131 (51.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 32/94 (34%), Positives = 52/94 (55%)
Query: 84 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 143
T Q+ ELE +F E +PD R E++ +L L +V+ WFQNRR + + Q ERH ++
Sbjct: 120 TSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIM 178
Query: 144 RQENDKLRAENMSIRDAMRNPIC-TNCGGPAIIG 176
+ ++ KL D +NP+ + GP++ G
Sbjct: 179 KDKSSKL--------DGRKNPVAGSKYLGPSLKG 204
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 133
P KKR R T +Q+ LE F+ + +++ +L+K+L L+ RQV WFQNRR + KT
Sbjct: 66 PEKKR--RLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 123
Query: 134 QLERHENSLLRQENDKLRAENMSI---RDAMRNPI 165
QLER + LL+ D+L + SI D +R+ +
Sbjct: 124 QLER-DYDLLKSTYDQLLSNYDSIVMDNDKLRSEV 157
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 135 (52.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR++ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR ++K +
Sbjct: 137 PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 196
Query: 135 L----ERHENSLL-RQENDKLRAENMSIRDAMRN 163
L E +E + R+E DK++ N S++ A ++
Sbjct: 197 LRAVKEINEQARREREEQDKMK--NESLKSAQQH 228
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 133 (51.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 77 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 135
K R + +QI+ LE +F+ + +++++L++ L L+ RQV WFQN+R + K+ QL
Sbjct: 30 KNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQL 89
Query: 136 ERHENSLLRQENDKLRAENMSIR 158
E N +LRQ D L ++ S++
Sbjct: 90 ETEYN-ILRQNYDNLASQFESLK 111
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QI+ELE F + ++++RL+LS+ L L RQVK WFQNRR + K +L
Sbjct: 38 RKKRCP-YTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK-KL 95
Query: 136 ER 137
R
Sbjct: 96 NR 97
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R++ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K
Sbjct: 53 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 112
Query: 134 QLERHENSLLRQENDKLRAE 153
+ + + +QE + A+
Sbjct: 113 ENNKDKFPASKQEGKEGEAK 132
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R+ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR MK
Sbjct: 13 PGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRR--MKW 70
Query: 134 QLERHENSLL-RQENDKLRAE 153
+ E +++ L ++ +K+ E
Sbjct: 71 KKENNKDKLPGARDEEKVEEE 91
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R+ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR MK
Sbjct: 13 PGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRR--MKW 70
Query: 134 QLERHENSLL-RQENDKLRAE 153
+ E +++ L ++ +K+ E
Sbjct: 71 KKENNKDKLPGARDEEKVEEE 91
>UNIPROTKB|F1RUB4 [details] [associations]
symbol:RHOXF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0019953 "sexual
reproduction" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0019953
OMA:NKRARCR GeneTree:ENSGT00530000063899 EMBL:FP102657
Ensembl:ENSSSCT00000013790 Uniprot:F1RUB4
Length = 181
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 76 RKKRYHRH--TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R++R R TP Q+QELE LF+ +PD R EL++R+ + +V+ WF+NRR + +
Sbjct: 96 RQRRIQRKKFTPVQLQELEGLFQRTQYPDVPTRRELARRMDVTETRVQIWFKNRRAKYR- 154
Query: 134 QLER 137
++ER
Sbjct: 155 RMER 158
>UNIPROTKB|J9P9S0 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
CTD:5396 KO:K09329 EMBL:AAEX03005214 EMBL:AAEX03005215
GeneID:609105 KEGG:cfa:609105 RefSeq:XP_862211.1
ProteinModelPortal:J9P9S0 Ensembl:ENSCAFT00000049641 Uniprot:J9P9S0
Length = 217
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + ES +G R LLE SGSD RK
Sbjct: 40 LDLEEAGDMVAAQADES----VGEAGRS-LLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLANKNASLLKSYSGDVTAVEQPI 179
>UNIPROTKB|Q643W9 [details] [associations]
symbol:Prrx1 "Paired mesoderm homeobox protein 1"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
EMBL:CH473958 HOVERGEN:HBG021349 UniGene:Rn.203584 EMBL:AY730764
IPI:IPI00471690 SMR:Q643W9 STRING:Q643W9 Ensembl:ENSRNOT00000042557
Genevestigator:Q643W9 Uniprot:Q643W9
Length = 217
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + ES +G R LLE SGSD RK
Sbjct: 40 LDLEEAGDMVAAQADES----VGEAGRS-LLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLANKNASLLKSYSGDVTAVEQPI 179
>ZFIN|ZDB-GENE-980528-2060 [details] [associations]
symbol:gsc "goosecoid" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEP] [GO:0007420
"brain development" evidence=IGI] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IGI] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI;IDA] [GO:0009948
"anterior/posterior axis specification" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980528-2060 GO:GO:0005634 GO:GO:0007420 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009948
GO:GO:0009950 GO:GO:0021999 HOVERGEN:HBG005921 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AL772209 IPI:IPI00487794
UniGene:Dr.289 SMR:Q7ZZR4 Ensembl:ENSDART00000082085
InParanoid:Q7ZZR4 Uniprot:Q7ZZR4
Length = 240
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/86 (34%), Positives = 51/86 (59%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT---- 129
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR
Sbjct: 144 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 203
Query: 130 QMKTQLERHENSLLRQENDKLRAENM 155
Q ++ E ENS ++ K +E +
Sbjct: 204 QKRSSSEESENSQKWNKSTKTTSEKI 229
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 84 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 142
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 143 -HKLPNTKMRSSN 154
>UNIPROTKB|F1NNC8 [details] [associations]
symbol:TLX1 "T-cell leukemia homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
Uniprot:F1NNC8
Length = 141
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 74 PPRKKRYHRH-TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
PP+KK+ T QI ELE F + +R L+K L + QVK WFQNRRT+ +
Sbjct: 9 PPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWR 68
Query: 133 TQLERHENSLLRQENDKL-RAENMSIRDAMRNPI 165
Q + +Q N L + + + + + PI
Sbjct: 69 RQTAEEREAERQQANRILMQLQQEAFQKTINQPI 102
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T Q ELE F + ++RLE+SK + L RQVK WFQNRR ++K ++
Sbjct: 22 RKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK-KM 79
Query: 136 ERHENSL 142
R EN +
Sbjct: 80 NR-ENRI 85
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T Q ELE F + ++RLE+SK + L RQVK WFQNRR ++K ++
Sbjct: 26 RKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK-KM 83
Query: 136 ERHENSL 142
R EN +
Sbjct: 84 NR-ENRI 89
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 73 NPPRKKRYHR---H-TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 128
+P +KKR R H T QQ+QELE+ F+ +PD R E++ L +V+ WF+NRR
Sbjct: 32 DPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRR 91
Query: 129 TQMKTQLERHENSLL 143
+ + + ER++ + L
Sbjct: 92 AKWRKR-ERNQQAEL 105
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 77 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 135
KK+ R T Q+ LE F+E D ++++LS+ L L+ RQ+ WFQNRR + K QL
Sbjct: 77 KKK--RLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQL 134
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMR 162
E+ +SL RQE D + E + D ++
Sbjct: 135 EQLYDSL-RQEYDVVSREKQMLHDEVK 160
>UNIPROTKB|G3V2N3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z97200 HGNC:HGNC:9142 ChiTaRS:PRRX1
ProteinModelPortal:G3V2N3 SMR:G3V2N3 Ensembl:ENST00000497230
ArrayExpress:G3V2N3 Bgee:G3V2N3 Uniprot:G3V2N3
Length = 200
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/150 (29%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + E+ +G R LLE SGSD RK
Sbjct: 40 LDLEEAGDMVAAQADEN----VGEAGRS-LLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLANKNASLLKSYSGDVTAVEQPI 179
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/103 (36%), Positives = 52/103 (50%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175
Query: 135 LER-HENSLLRQEN--DKLRAENMSIRDAMRNPICTNCGGPAI 174
+ H+ +L N D R A+R P + G I
Sbjct: 176 ENQMHKGVILGTANHLDACRVAPYVNMGALRMPFQQHPQGEGI 218
>FB|FBgn0030058 [details] [associations]
symbol:CG11294 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014298 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG39948 GeneTree:ENSGT00700000104256 EMBL:BT022199
RefSeq:NP_572500.1 UniGene:Dm.26524 SMR:Q9W3C6
EnsemblMetazoa:FBtr0071224 EnsemblMetazoa:FBtr0331456 GeneID:31807
KEGG:dme:Dmel_CG11294 UCSC:CG11294-RA FlyBase:FBgn0030058
InParanoid:Q9W3C6 OMA:MAGPFIS OrthoDB:EOG4DBRWV GenomeRNAi:31807
NextBio:775414 Uniprot:Q9W3C6
Length = 261
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R++R +R TPQQ+QELE+LF++ +PD R E++ R+ L +V+ WFQNRR + +
Sbjct: 22 RRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRK 81
Query: 134 Q 134
Q
Sbjct: 82 Q 82
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K +
Sbjct: 67 RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 125
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T Q ELE F + ++RLE+SK + L RQVK WFQNRR ++K ++
Sbjct: 22 RKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLK-KM 79
Query: 136 ERHENSL 142
R EN +
Sbjct: 80 SR-ENRI 85
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 77 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 136
++ Y R+ Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K +
Sbjct: 15 RQTYSRY---QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENN 71
Query: 137 RHENSLLRQENDKLRAENM 155
+ + + E ++L E +
Sbjct: 72 KDKFPSSKCEQEELEKEKL 90
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 43 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 102
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 103 ENQLHKGVLI 112
>RGD|1564332 [details] [associations]
symbol:Rhox11 "reproductive homeobox 11" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 RGD:1564332 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
OrthoDB:EOG4FFD33 GeneTree:ENSGT00530000063899 EMBL:DQ058658
IPI:IPI00358669 RefSeq:NP_001020044.1 UniGene:Rn.153915
Ensembl:ENSRNOT00000035449 GeneID:298346 KEGG:rno:298346
UCSC:RGD:1564332 CTD:194738 eggNOG:KOG0490 HOGENOM:HOG000136395
HOVERGEN:HBG067324 InParanoid:Q4TU72 NextBio:643503
Genevestigator:Q4TU72 Uniprot:Q4TU72
Length = 215
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/82 (31%), Positives = 52/82 (63%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM-KT 133
PRK ++ TP Q+ E++++F+E +PD +R EL++ + ++ ++VK WF N+R ++ K
Sbjct: 97 PRKP--YKFTPGQLWEMQAVFEETQYPDAFRRKELAELMNVDEQKVKDWFNNKRAKLRKI 154
Query: 134 QLERHENSLLRQENDKLRAENM 155
Q E + ++ D+LR + +
Sbjct: 155 QREILKGKIITPTQDELRMKTL 176
>UNIPROTKB|A2VE85 [details] [associations]
symbol:PRRX1 "Paired related homeobox 1" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:DAAA02042867 EMBL:DAAA02042868 EMBL:BC133623 IPI:IPI00717328
RefSeq:NP_001075208.1 UniGene:Bt.78963 SMR:A2VE85
Ensembl:ENSBTAT00000006003 GeneID:540901 KEGG:bta:540901
InParanoid:A2VE85 NextBio:20878904 Uniprot:A2VE85
Length = 245
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + ES +G R LLE SGSD RK
Sbjct: 40 LDLEEAGDMVAAQADES----VGEAGRS-LLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLANKNASLLKSYSGDVTAVEQPI 179
>UNIPROTKB|E2RGD6 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048844
"artery morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 GO:GO:0060021 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 CTD:5396 KO:K09329 OMA:WGSAAPY EMBL:AAEX03005214
EMBL:AAEX03005215 RefSeq:XP_850725.1 ProteinModelPortal:E2RGD6
SMR:E2RGD6 Ensembl:ENSCAFT00000023797 GeneID:609105 KEGG:cfa:609105
NextBio:20894722 Uniprot:E2RGD6
Length = 245
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + ES +G R LLE SGSD RK
Sbjct: 40 LDLEEAGDMVAAQADES----VGEAGRS-LLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLANKNASLLKSYSGDVTAVEQPI 179
>MGI|MGI:97712 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI]
[GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0042474
"middle ear morphogenesis" evidence=IGI;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IGI]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IGI;IMP] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI;IMP] [GO:0048844 "artery morphogenesis"
evidence=IGI;IMP] [GO:0051216 "cartilage development"
evidence=IGI;IMP] [GO:0060021 "palate development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97712 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0042472 GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
ChiTaRS:PRRX1 EMBL:L06502 EMBL:U03873 EMBL:X59725 EMBL:BC092372
IPI:IPI00118248 IPI:IPI00230653 PIR:I48902 PIR:S26076
RefSeq:NP_035257.1 RefSeq:NP_783617.2 UniGene:Mm.288642
ProteinModelPortal:P63013 SMR:P63013 IntAct:P63013 STRING:P63013
PhosphoSite:P63013 PRIDE:P63013 Ensembl:ENSMUST00000027878
Ensembl:ENSMUST00000075805 GeneID:18933 KEGG:mmu:18933
UCSC:uc007dhh.1 UCSC:uc007dhi.1 InParanoid:P63013 NextBio:295248
Bgee:P63013 CleanEx:MM_PRRX1 Genevestigator:P63013
GermOnline:ENSMUSG00000026586 Uniprot:P63013
Length = 245
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + ES +G R LLE SGSD RK
Sbjct: 40 LDLEEAGDMVAAQADES----VGEAGRS-LLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLANKNASLLKSYSGDVTAVEQPI 179
>RGD|628884 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=IEA;ISO] [GO:0042474 "middle ear
morphogenesis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048844 "artery morphogenesis" evidence=IEA;ISO] [GO:0051216
"cartilage development" evidence=IEA;ISO] [GO:0060021 "palate
development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:S82911 IPI:IPI00198569 RefSeq:NP_722543.1 UniGene:Rn.203584
ProteinModelPortal:P63014 SMR:P63014 STRING:P63014
Ensembl:ENSRNOT00000004950 GeneID:266813 KEGG:rno:266813
UCSC:RGD:628884 InParanoid:P63014 NextBio:624741
ArrayExpress:P63014 Genevestigator:P63014
GermOnline:ENSRNOG00000003720 Uniprot:P63014
Length = 245
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + ES +G R LLE SGSD RK
Sbjct: 40 LDLEEAGDMVAAQADES----VGEAGRS-LLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLANKNASLLKSYSGDVTAVEQPI 179
>FB|FBgn0000014 [details] [associations]
symbol:abd-A "abdominal A" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0008406 "gonad
development" evidence=NAS;TAS] [GO:0007422 "peripheral nervous
system development" evidence=TAS] [GO:0035224 "genital disc
anterior/posterior pattern formation" evidence=IEP] [GO:0007506
"gonadal mesoderm development" evidence=IMP] [GO:0008354 "germ cell
migration" evidence=IMP;TAS] [GO:0007280 "pole cell migration"
evidence=TAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0007385 "specification of segmental identity, abdomen"
evidence=NAS] [GO:0007438 "oenocyte development" evidence=IMP]
[GO:0035053 "dorsal vessel heart proper cell fate commitment"
evidence=IEP;IMP;TAS] [GO:0007507 "heart development" evidence=IMP]
[GO:0007501 "mesodermal cell fate specification" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0009987 "cellular process"
evidence=IMP] [GO:0007400 "neuroblast fate determination"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0048806 "genitalia development"
evidence=IMP] [GO:0010002 "cardioblast differentiation"
evidence=IMP] [GO:0048738 "cardiac muscle tissue development"
evidence=IMP] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0014019 "neuroblast development" evidence=IMP]
[GO:0048636 "positive regulation of muscle organ development"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0042694 "muscle
cell fate specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0006915 GO:GO:0007280 GO:GO:0042694 GO:GO:0048636
GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 eggNOG:NOG328968
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X54453 EMBL:U31961
EMBL:BT016031 PIR:A35915 RefSeq:NP_001163632.1
RefSeq:NP_001247145.1 RefSeq:NP_476693.1 RefSeq:NP_732176.1
UniGene:Dm.3286 ProteinModelPortal:P29555 SMR:P29555 DIP:DIP-17987N
MINT:MINT-344957 STRING:P29555 EnsemblMetazoa:FBtr0083388
GeneID:42037 KEGG:dme:Dmel_CG10325 CTD:42037 FlyBase:FBgn0000014
GeneTree:ENSGT00700000104090 InParanoid:P29555 KO:K09311
OMA:QPFISSH OrthoDB:EOG4VHHQ4 PhylomeDB:P29555 GenomeRNAi:42037
NextBio:826865 Bgee:P29555 GermOnline:CG10325 GO:GO:0005667
GO:GO:0003705 GO:GO:0048738 GO:GO:0010002 GO:GO:0035225
GO:GO:0035053 GO:GO:0035224 GO:GO:0048806 GO:GO:0007506
GO:GO:0007501 GO:GO:0007494 GO:GO:0014019 GO:GO:0007400
GO:GO:0007438 Uniprot:P29555
Length = 590
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/94 (34%), Positives = 56/94 (59%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR++ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR ++K +
Sbjct: 397 PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
Query: 135 L----ERHENSLL-RQENDKLRAENMSIRDAMRN 163
L E +E + R+E +K++A+ +++ A +N
Sbjct: 457 LRAVKEINEQARRDREEQEKMKAQE-TMKSAQQN 489
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 111 (44.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKK + +Q+ ELE F+ + R EL+KRL + QVK WFQNRRT+ K
Sbjct: 70 RKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIE 129
Query: 136 ERHENS 141
E S
Sbjct: 130 SEKERS 135
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 34 ESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELES 93
+ F G +G+RS + ++ G N+ + +K+ R +Q++ LE
Sbjct: 32 QDFHGFLGKRSPMNNVQ-----GFCNLDMNGDEEYSDDGSKMGEKK-RRLNMEQLKALEK 85
Query: 94 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLE-------------RHE 139
F+ + ++LEL++ L L+ RQ+ WFQNRR + KT QLE R E
Sbjct: 86 DFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDE 145
Query: 140 NSLLRQENDKLRAENMSIRDAMRNPI 165
N +L+ +N KL+A+ M+++ R PI
Sbjct: 146 NEVLQTQNQKLQAQVMALKS--REPI 169
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 17 PNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPR 76
P++ GGG+ + R SF G+ S L +S + ++NM +
Sbjct: 53 PHLFYGGGGNYMMNR-SMSFTGV----SDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDG 107
Query: 77 K-----KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 131
++ R +Q++ LE F+ + +++++L+K L L+ RQ+ WFQNRR +
Sbjct: 108 SHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARW 167
Query: 132 KT-QLERHENSLLRQENDKLRAENMSI 157
KT QLER +SL +Q D L+++N S+
Sbjct: 168 KTKQLERDYDSLKKQF-DVLKSDNDSL 193
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 110 (43.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 86 QQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 110 (43.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 86 QQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>ZFIN|ZDB-GENE-030131-9033 [details] [associations]
symbol:prrx1b "paired related homeobox 1b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-9033 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010628 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P10037
eggNOG:NOG267226 HOVERGEN:HBG021349 KO:K09329 OMA:WGSAAPY
EMBL:CU571309 EMBL:BC064671 IPI:IPI00499847 RefSeq:NP_956344.1
UniGene:Dr.76340 SMR:Q6P295 Ensembl:ENSDART00000061588
GeneID:337089 KEGG:dre:337089 CTD:337089 InParanoid:Q6P295
NextBio:20812053 Uniprot:Q6P295
Length = 245
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 42/144 (29%), Positives = 65/144 (45%)
Query: 26 DLQLQR--MGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRH 83
DL+ R +G + +G R L SGSD RK+R +R
Sbjct: 43 DLEEAREMVGSQVDESVGETGRTMLESPGLTSGSDT-TQQENEQLNSEEKKKRKQRRNRT 101
Query: 84 T--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENS 141
T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + + R+E +
Sbjct: 102 TFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR----RNERA 157
Query: 142 LLRQENDKLRAENMSIRDAMRNPI 165
+L +N L A+ PI
Sbjct: 158 MLASKNASLLKSYSGDVTAVEQPI 181
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 95 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 154
Query: 134 QLERHENSLLRQENDKLRA 152
+ + E+S N+ A
Sbjct: 155 E-HKEESSSTPAPNEPTSA 172
>UNIPROTKB|G1K361 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AADN02033985
EMBL:AADN02033987 EMBL:AADN02033986 ProteinModelPortal:G1K361
Ensembl:ENSGALT00000033836 Uniprot:G1K361
Length = 214
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + G+ G GR LLE SGSD RK
Sbjct: 40 LDLEEAGDM-VAAQGDEGGGEPGR----SLLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLASKNASLLKSYSGDVTAVEQPI 179
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 38/121 (31%), Positives = 65/121 (53%)
Query: 36 FEGIIGRRS-REDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELESL 94
F +G+RS E + E+ +NM +K+R + +Q++ LE
Sbjct: 47 FASFLGKRSPMEGCCDLET---GNNMNGEEDYSDDGSQMGEKKRRLNM---EQVKTLEKN 100
Query: 95 FKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSLLRQENDKLRAE 153
F+ + +++++L++ L L+ RQ+ WFQNRR + KT QLE+ ++L RQ D L+AE
Sbjct: 101 FELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQF-DTLKAE 159
Query: 154 N 154
N
Sbjct: 160 N 160
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 118 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 177
Query: 135 LERHENSLL 143
+ NS++
Sbjct: 178 ENQMHNSVI 186
>UNIPROTKB|A6NLG4 [details] [associations]
symbol:SHOX2 "cDNA FLJ38019 fis, clone CTONG2012758, highly
similar to Short stature homeobox protein 2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471052
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 UniGene:Hs.55967 HGNC:HGNC:10854
HOVERGEN:HBG007233 NextBio:25151 EMBL:AC112502 EMBL:AK095338
IPI:IPI01024865 SMR:A6NLG4 STRING:A6NLG4 Ensembl:ENST00000441443
Ensembl:ENST00000490689 Uniprot:A6NLG4
Length = 190
Score = 122 (48.0 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 10 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 69
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 70 ENQLHKGVLI 79
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P K+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 5 PDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 63
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T Q ELE F + ++RLE+S+ + L RQVK WFQNRR ++K ++
Sbjct: 20 RKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK-KM 77
Query: 136 ERHENSL 142
R EN +
Sbjct: 78 NR-ENRI 83
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T Q ELE F + ++RLE+S+ + L RQVK WFQNRR ++K ++
Sbjct: 21 RKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK-KM 78
Query: 136 ERHENSL 142
R EN +
Sbjct: 79 NR-ENRI 84
>FB|FBgn0010323 [details] [associations]
symbol:Gsc "Goosecoid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;ISS;NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0001078 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:145258 eggNOG:NOG247162 KO:K09324 EMBL:X95420 EMBL:U52968
PIR:S70617 RefSeq:NP_476949.1 UniGene:Dm.4841
ProteinModelPortal:P54366 SMR:P54366 IntAct:P54366 MINT:MINT-314608
STRING:P54366 PRIDE:P54366 GeneID:33240 KEGG:dme:Dmel_CG2851
FlyBase:FBgn0010323 HOGENOM:HOG000276707 InParanoid:P54366
OrthoDB:EOG4RV17N GenomeRNAi:33240 NextBio:782613 Bgee:P54366
GermOnline:CG2851 Uniprot:P54366
Length = 419
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 27/74 (36%), Positives = 48/74 (64%)
Query: 74 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 131
PP++KR HR T +Q+++LE+ F + +PD R +L+ ++ L+ +V+ WF+NRR +
Sbjct: 282 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 341
Query: 132 KTQLERHENSLLRQ 145
+ Q +R E LR+
Sbjct: 342 RKQ-KREEQERLRK 354
>UNIPROTKB|P54821 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0003713 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GO:GO:0002053 GO:GO:0045880 GO:GO:0042474
eggNOG:NOG267226 CTD:5396 HOVERGEN:HBG021349 KO:K09329
OrthoDB:EOG4RR6J8 EMBL:AB451463 EMBL:Z97200 EMBL:BC074993
EMBL:M95929 IPI:IPI00008822 IPI:IPI00221036 RefSeq:NP_008833.1
RefSeq:NP_073207.1 UniGene:Hs.283416 ProteinModelPortal:P54821
SMR:P54821 STRING:P54821 PhosphoSite:P54821 DMDM:6174916
PRIDE:P54821 DNASU:5396 Ensembl:ENST00000239461
Ensembl:ENST00000367760 GeneID:5396 KEGG:hsa:5396 UCSC:uc001ghe.3
UCSC:uc001ghf.3 GeneCards:GC01P170632 HGNC:HGNC:9142 HPA:HPA051084
MIM:167420 MIM:202650 neXtProt:NX_P54821 Orphanet:990
PharmGKB:PA33466 InParanoid:P54821 OMA:WGSAAPY PhylomeDB:P54821
ChiTaRS:PRRX1 GenomeRNAi:5396 NextBio:20925 ArrayExpress:P54821
Bgee:P54821 CleanEx:HS_PRRX1 Genevestigator:P54821
GermOnline:ENSG00000116132 Uniprot:P54821
Length = 245
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 44/150 (29%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + E+ +G R LLE SGSD RK
Sbjct: 40 LDLEEAGDMVAAQADEN----VGEAGRS-LLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLANKNASLLKSYSGDVTAVEQPI 179
>UNIPROTKB|F1NPM5 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042474
"middle ear morphogenesis" evidence=IEA] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0030178
GO:GO:0023019 IPI:IPI00594603 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AADN02003672
Ensembl:ENSGALT00000017878 Uniprot:F1NPM5
Length = 246
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++R+ L +V+ WF+NRR + +
Sbjct: 149 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR 208
Query: 134 Q 134
Q
Sbjct: 209 Q 209
>UNIPROTKB|H0YMR3 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YMR3 SMR:H0YMR3
Ensembl:ENST00000560001 Bgee:H0YMR3 Uniprot:H0YMR3
Length = 279
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/93 (38%), Positives = 49/93 (52%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175
Query: 135 LER-HENSLLRQEN--DKLRAENMSIRDAMRNP 164
+ H+ +L N D R A+R P
Sbjct: 176 ENQMHKGVILGTANHLDACRVAPYVNMGALRMP 208
>UNIPROTKB|F1P8H3 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 CTD:3234
OMA:GQEYFHP EMBL:AAEX03017789 RefSeq:XP_003434266.1
ProteinModelPortal:F1P8H3 Ensembl:ENSCAFT00000021331
GeneID:100687992 KEGG:cfa:100687992 Uniprot:F1P8H3
Length = 199
Score = 122 (48.0 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 14 QQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXN 73
Q+QP Q +L +S G IG ED +H ++S S +
Sbjct: 52 QRQPIFTTQQEAELVQYPDCKSSSGNIG----EDP-DHLNQSSSPSQMFPWMRPQAA--- 103
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R++ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K
Sbjct: 104 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 163
Query: 134 QLERHENSLLRQE 146
+ + + + RQE
Sbjct: 164 ENNKDKFPVSRQE 176
>UNIPROTKB|O15266 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
Orphanet:137693 eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331
OrthoDB:EOG41C6X2 EMBL:Y11536 EMBL:Y11535 EMBL:U82668 EMBL:U89331
EMBL:BX004827 IPI:IPI00005744 IPI:IPI00411417 RefSeq:NP_000442.1
RefSeq:NP_006874.1 UniGene:Hs.105932 ProteinModelPortal:O15266
SMR:O15266 IntAct:O15266 STRING:O15266 PhosphoSite:O15266
PRIDE:O15266 DNASU:6473 Ensembl:ENST00000334060
Ensembl:ENST00000381575 Ensembl:ENST00000381578
Ensembl:ENST00000554971 GeneID:6473 KEGG:hsa:6473 UCSC:uc004cph.1
UCSC:uc004cpi.3 CTD:6473 GeneCards:GC0XP000585 HGNC:HGNC:10853
MIM:127300 MIM:249700 MIM:300582 MIM:312865 MIM:400020
neXtProt:NX_O15266 Orphanet:2632 Orphanet:240 PharmGKB:PA134978644
InParanoid:O15266 OMA:SNHCPVH PhylomeDB:O15266 GenomeRNAi:6473
NextBio:25145 Bgee:O15266 CleanEx:HS_SHOX Genevestigator:O15266
Uniprot:O15266
Length = 292
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 36/93 (38%), Positives = 49/93 (52%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175
Query: 135 LER-HENSLLRQEN--DKLRAENMSIRDAMRNP 164
+ H+ +L N D R A+R P
Sbjct: 176 ENQMHKGVILGTANHLDACRVAPYVNMGALRMP 208
>UNIPROTKB|E1BF87 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0042474 "middle ear
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 OMA:GVSMANS EMBL:DAAA02032213 EMBL:DAAA02032214
EMBL:DAAA02032215 IPI:IPI00713783 Ensembl:ENSBTAT00000003817
Uniprot:E1BF87
Length = 166
Score = 116 (45.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 76 RKKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
+K+R +R T Q+Q LE +F+ +PD R EL++R+ L +V+ WFQNRR + +
Sbjct: 15 KKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR- 73
Query: 134 QLERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L + L ++ S A+ P+
Sbjct: 74 ---RNERAMLANRSASL-LKSYSQEAAIEQPV 101
>UNIPROTKB|H0YIZ3 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 EMBL:AL590369 HGNC:HGNC:21338
ChiTaRS:PRRX2 Ensembl:ENST00000557730 Uniprot:H0YIZ3
Length = 166
Score = 116 (45.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 76 RKKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
+K+R +R T Q+Q LE +F+ +PD R EL++R+ L +V+ WFQNRR + +
Sbjct: 17 KKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR- 75
Query: 134 QLERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L + L ++ S A+ P+
Sbjct: 76 ---RNERAMLASRSASL-LKSYSQEAAIEQPV 103
>UNIPROTKB|G1K2Z3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:WGSAAPY EMBL:AADN02033985 EMBL:AADN02033987 EMBL:AADN02033986
Ensembl:ENSGALT00000005264 Uniprot:G1K2Z3
Length = 245
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + G+ G GR LLE SGSD RK
Sbjct: 40 LDLEEAGDM-VAAQGDEGGGEPGR----SLLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLASKNASLLKSYSGDVTAVEQPI 179
>UNIPROTKB|Q05437 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG267226
EMBL:D13433 EMBL:S69088 IPI:IPI00592701 PIR:I51226
RefSeq:NP_001007822.1 UniGene:Gga.1546 ProteinModelPortal:Q05437
SMR:Q05437 IntAct:Q05437 STRING:Q05437 GeneID:373941
KEGG:gga:373941 CTD:5396 HOVERGEN:HBG021349 InParanoid:Q05437
KO:K09329 OrthoDB:EOG4RR6J8 NextBio:20813473 Uniprot:Q05437
Length = 245
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 19 IDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES-RSGSDNMXXXXXXXXXXXXNPPRK 77
+D + GD+ + G+ G GR LLE SGSD RK
Sbjct: 40 LDLEEAGDM-VAAQGDEGGGEPGR----SLLESPGLTSGSDTPQQDNDQLNSEEKKK-RK 93
Query: 78 KRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
+R +R T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + +
Sbjct: 94 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR--- 150
Query: 136 ERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L +N L A+ PI
Sbjct: 151 -RNERAMLASKNASLLKSYSGDVTAVEQPI 179
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 125 (49.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 31/94 (32%), Positives = 50/94 (53%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 151 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKD 209
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTN 168
H + N K+R+ + S + +C+N
Sbjct: 210 ---H-----KLPNTKIRSNSASTNSSGCPTLCSN 235
>UNIPROTKB|J9NTV3 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAEX03014876
EMBL:AAEX03014875 Ensembl:ENSCAFT00000044353
GeneTree:ENSGT00700000105407 Uniprot:J9NTV3
Length = 158
Score = 113 (44.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 74 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 131
P R+ R HR + +Q+Q LE+LF + +PD R L+ R+ L +V+ WF+NRR +
Sbjct: 76 PQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAGRIRLREERVEVWFKNRRAKW 135
Query: 132 KTQLERHENSLL 143
+ Q + LL
Sbjct: 136 RHQKRSATSRLL 147
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 148 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 206
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 207 -HKLPNTKMRSSN 218
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
RKKR +T Q ELE F + ++RLE+S+ + L RQVK WFQNRR ++K
Sbjct: 1 RKKRCP-YTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMKLK 56
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RKK + QI ELE F + +R L+K L + QVK WFQNRRT+ +
Sbjct: 9 PKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRR 68
Query: 134 QLERHENSLLRQENDKLRAE------NMSIRDAMR-NPIC 166
Q E RQ+ +L + S+ ++++ +P+C
Sbjct: 69 QTAE-EREAERQQASRLMLQLQHDAFQKSLNESIQPDPLC 107
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 87 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQE 146
Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K + + + + E
Sbjct: 6 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCE 65
Query: 147 NDKLRAENM 155
++L + +
Sbjct: 66 QEELEKQKL 74
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 30/83 (36%), Positives = 53/83 (63%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-Q 134
+KKR +Q++ LE F+ + +++++L+K L ++ RQ+ WFQNRR + KT Q
Sbjct: 87 KKKRLQL---EQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQ 143
Query: 135 LERHENSLLRQENDKLRAENMSI 157
LER +SL +Q + L+++N S+
Sbjct: 144 LERDYDSLKKQF-ESLKSDNASL 165
>ZFIN|ZDB-GENE-020905-5 [details] [associations]
symbol:prrx1a "paired related homeobox 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-020905-5 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P06601
HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 eggNOG:NOG309174 EMBL:BX548024
EMBL:BC053228 IPI:IPI00493267 RefSeq:NP_999899.1 UniGene:Dr.32622
SMR:Q7T373 Ensembl:ENSDART00000041365 GeneID:406431 KEGG:dre:406431
CTD:406431 InParanoid:Q7T373 OMA:CANNTTA NextBio:20818028
Uniprot:Q7T373
Length = 245
Score = 124 (48.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 43/144 (29%), Positives = 64/144 (44%)
Query: 26 DLQLQR--MGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRH 83
DL+ R +G E G R L SGSD RK+R +R
Sbjct: 43 DLEEAREMVGAQAEESAGEAGRSMLESPGLTSGSDT-TQQENEQLNAEEKKKRKQRRNRT 101
Query: 84 T--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENS 141
T Q+Q LE +F+ +PD R +L++R+ L +V+ WFQNRR + + R+E +
Sbjct: 102 TFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR----RNERA 157
Query: 142 LLRQENDKLRAENMSIRDAMRNPI 165
+L +N L A+ PI
Sbjct: 158 MLASKNASLLKSFSGEVTAVEQPI 181
>MGI|MGI:96204 [details] [associations]
symbol:Hoxd12 "homeobox D12" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96204 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH466519 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001501
GO:GO:0007389 GO:GO:0042733 GeneTree:ENSGT00700000104263
HOGENOM:HOG000231177 HOVERGEN:HBG052050 KO:K09297 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG EMBL:X58849
EMBL:AK031206 EMBL:AL928644 EMBL:BC145656 IPI:IPI00136959
PIR:S16317 RefSeq:NP_032300.2 UniGene:Mm.57124
ProteinModelPortal:P23812 SMR:P23812 IntAct:P23812 STRING:P23812
PhosphoSite:P23812 PRIDE:P23812 Ensembl:ENSMUST00000001878
GeneID:15432 KEGG:mmu:15432 UCSC:uc008kdv.1 InParanoid:Q8BSN0
NextBio:288198 Bgee:P23812 CleanEx:MM_HOXD12 Genevestigator:P23812
GermOnline:ENSMUSG00000001823 Uniprot:P23812
Length = 268
Score = 125 (49.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QQI ELE+ F + ++R ELS RL L +QVK WFQNRR + K +
Sbjct: 201 RKKR-KPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 259
Query: 136 ERHE 139
+R +
Sbjct: 260 QREQ 263
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 112 (44.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 77 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ-L 135
K + R T Q+++LE F + +L+LS +L L RQV WFQN+R + KTQ L
Sbjct: 9 KNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSL 68
Query: 136 E-RHENSLLRQE---NDKLRAENMS--IRDAM---RNPIC--TNCGGPAIIGDI-SLEEQ 183
E +H + E +DK + E+ ++D + RN + TN P ++ S +E
Sbjct: 69 EVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQLALFTNQDSPVDNSNLGSCDED 128
Query: 184 H 184
H
Sbjct: 129 H 129
>UNIPROTKB|G3MZU0 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 EMBL:DAAA02045756 EMBL:DAAA02045757
Ensembl:ENSBTAT00000065062 OMA:KPPRESC Uniprot:G3MZU0
Length = 169
Score = 116 (45.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 74 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 131
PPR+ R HR + +Q++ LE+LF + +PD R L+ R+ L +V+ WF+NRR +
Sbjct: 86 PPRRTRRHRTIFSEEQLRALEALFMQNQYPDVGTRERLAGRIRLREERVEVWFKNRRAKW 145
Query: 132 KTQ 134
+ Q
Sbjct: 146 RHQ 148
>UNIPROTKB|O13004 [details] [associations]
symbol:GSC2 "Goosecoid 2" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG244876 HOGENOM:HOG000112823 OrthoDB:EOG4RFKV2
GeneTree:ENSGT00700000104273 EMBL:AADN02043256 EMBL:Y09850
IPI:IPI00821873 Ensembl:ENSGALT00000038540 InParanoid:O13004
Uniprot:O13004
Length = 61
Score = 106 (42.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 79 RYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
R HR T +Q+Q LE+LF + +PD R L+ R+ L+ +V+ WF+NRR + + Q
Sbjct: 2 RRHRTIFTEEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAKWRHQ 59
>RGD|1309797 [details] [associations]
symbol:Hoxd12 "homeo box D12" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=IEA;ISO] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1309797 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 GO:GO:0007389 GO:GO:0042733 OMA:PDGLPWG
OrthoDB:EOG43N7DG IPI:IPI00368581 Ensembl:ENSRNOT00000002154
Uniprot:D4ACD1
Length = 278
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QQI ELE+ F + ++R ELS RL L +QVK WFQNRR + K +
Sbjct: 211 RKKR-KPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 269
Query: 136 ERHE 139
+R +
Sbjct: 270 QREQ 273
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 122 (48.0 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 127 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 186
Query: 134 QLERHENSLLRQENDKLRA 152
+ + E+S N+ A
Sbjct: 187 E-HKEESSSTPAPNEPTSA 204
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 125 (49.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 180 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 238
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 239 -HKLPNTKMRSSN 250
>UNIPROTKB|E9PT77 [details] [associations]
symbol:LOC100360577 "Protein LOC100360577" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
Uniprot:E9PT77
Length = 285
Score = 125 (49.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 180 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 238
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 239 -HKLPNTKMRSSN 250
>UNIPROTKB|F1RZG1 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0048705
GeneTree:ENSGT00700000104332 OMA:GQEYFHP EMBL:CU570829
Ensembl:ENSSSCT00000017404 Uniprot:F1RZG1
Length = 221
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 14 QQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXN 73
Q+QP Q +L +S G IG ED +H ++S S +
Sbjct: 74 QRQPIFTTQQEAELVQYPDCKSSSGNIG----EDP-DHLNQSSSPSQMFPWMRPQAA--- 125
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R++ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K
Sbjct: 126 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 185
Query: 134 QLERHENSLLRQE 146
+ + + + RQE
Sbjct: 186 ENNKDKFPVSRQE 198
>UNIPROTKB|F1PP15 [details] [associations]
symbol:RHOXF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0019953
"sexual reproduction" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0019953 OMA:NKRARCR
GeneTree:ENSGT00530000063899 EMBL:AAEX03026834
Ensembl:ENSCAFT00000029306 Uniprot:F1PP15
Length = 182
Score = 118 (46.6 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 74 PPRKKRYHRH--TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 131
P R++R R+ T Q+QELES F+ +PD R EL++R+ + +V+ WF+NRR +
Sbjct: 97 PRRRRRAQRNKFTQVQVQELESAFQHTQYPDVLTRQELARRMDVTEIRVQVWFKNRRAKY 156
Query: 132 K 132
K
Sbjct: 157 K 157
>UNIPROTKB|P53545 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000112823 EMBL:X70471 IPI:IPI00594603 PIR:A47539
RefSeq:NP_990662.1 UniGene:Gga.738 ProteinModelPortal:P53545
SMR:P53545 STRING:P53545 GeneID:396273 KEGG:gga:396273 CTD:145258
eggNOG:NOG247162 HOVERGEN:HBG005921 InParanoid:P53545 KO:K09324
OrthoDB:EOG46Q6T9 NextBio:20816324 Uniprot:P53545
Length = 245
Score = 123 (48.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 148 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 207
Query: 134 Q 134
Q
Sbjct: 208 Q 208
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 105 (42.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 33 GESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELE 92
G+ + G++G + E + SR ++ + RK+R T +Q++ELE
Sbjct: 16 GDDY-GVLGSTANETE-KKSSRRRKESSDNQENRGKPEGSSKARKERT-AFTKEQLRELE 72
Query: 93 SLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
+ F + +R E++ L L RQVK WFQNRR + K
Sbjct: 73 AEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 112
>RGD|1564874 [details] [associations]
symbol:Nkx1-1 "NK1 transcription factor related, locus 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043467 "regulation of generation of precursor
metabolites and energy" evidence=IEA;ISO] [GO:0050877 "neurological
system process" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564874 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0050877 GeneTree:ENSGT00660000095141
GO:GO:0043467 IPI:IPI00766731 ProteinModelPortal:F1M5E3 SMR:F1M5E3
Ensembl:ENSRNOT00000057911 Uniprot:F1M5E3
Length = 60
Score = 105 (42.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR+ R T +Q+ LE+ FK + +RL L+ L L QVK WFQNRRT+ K Q
Sbjct: 1 PRRART-AFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 59
>UNIPROTKB|F1NMG4 [details] [associations]
symbol:LOC100858374 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
Length = 309
Score = 125 (49.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 209 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 267
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 268 -HKLPNTKMRSSN 279
>UNIPROTKB|P17277 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
Length = 309
Score = 125 (49.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 209 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 267
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 268 -HKLPNTKMRSSN 279
>MGI|MGI:96188 [details] [associations]
symbol:Hoxb7 "homeobox B7" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030099 "myeloid cell differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96188 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090 GO:GO:0090190
GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT EMBL:Y00436
EMBL:X06762 EMBL:AK136706 EMBL:AL645478 EMBL:M18167 EMBL:M18400
EMBL:X14570 IPI:IPI00132379 PIR:A26846 RefSeq:NP_034590.2
UniGene:Mm.390366 ProteinModelPortal:P09024 SMR:P09024
IntAct:P09024 MINT:MINT-1172508 STRING:P09024 PhosphoSite:P09024
PRIDE:P09024 DNASU:15415 Ensembl:ENSMUST00000049352 GeneID:15415
KEGG:mmu:15415 UCSC:uc007lbr.1 InParanoid:A2A9Z9 NextBio:288146
Bgee:P09024 CleanEx:MM_HOXB7 Genevestigator:P09024
GermOnline:ENSMUSG00000038721 Uniprot:P09024
Length = 217
Score = 121 (47.7 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR MK
Sbjct: 135 PDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRR--MKW 192
Query: 134 QLERHENSLLRQENDKLRAE 153
+ E + DK AE
Sbjct: 193 KKENKTSGPGTTGQDKAEAE 212
>UNIPROTKB|F1PH84 [details] [associations]
symbol:GSC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0048644 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048704 GO:GO:0030178
GO:GO:0021904 GO:GO:0023019 GO:GO:0042474 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AAEX03005954
Ensembl:ENSCAFT00000028054 Uniprot:F1PH84
Length = 255
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 157 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 216
Query: 134 Q 134
Q
Sbjct: 217 Q 217
>UNIPROTKB|F1SCC4 [details] [associations]
symbol:GSC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0048644 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048704 GO:GO:0030178
GO:GO:0021904 GO:GO:0023019 GO:GO:0042474 KO:K09324 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:CU302448 RefSeq:XP_003482361.1
UniGene:Ssc.72109 Ensembl:ENSSSCT00000002768 GeneID:397342
KEGG:ssc:397342 CTD:397342 ArrayExpress:F1SCC4 Uniprot:F1SCC4
Length = 256
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>MGI|MGI:95841 [details] [associations]
symbol:Gsc "goosecoid homeobox" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0001085 "RNA polymerase
II transcription factor binding" evidence=IPI] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009653
"anatomical structure morphogenesis" evidence=IGI] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IGI] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IDA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IGI] [GO:0042474 "middle ear morphogenesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043583 "ear development" evidence=IMP]
[GO:0048644 "muscle organ morphogenesis" evidence=IMP] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:95841 GO:GO:0048644 GO:GO:0043565 GO:GO:0030900
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0048704 GO:GO:0030178 GO:GO:0021904
GO:GO:0023019 GO:GO:0042474 HOGENOM:HOG000112823 CTD:145258
eggNOG:NOG247162 HOVERGEN:HBG005921 KO:K09324 OrthoDB:EOG46Q6T9
OMA:PVGPSCC EMBL:M85271 EMBL:Y13149 EMBL:Y13150 IPI:IPI00129501
PIR:A42768 RefSeq:NP_034481.1 UniGene:Mm.129
ProteinModelPortal:Q02591 SMR:Q02591 MINT:MINT-4998459
STRING:Q02591 PhosphoSite:Q02591 PRIDE:Q02591 DNASU:14836
Ensembl:ENSMUST00000021513 GeneID:14836 KEGG:mmu:14836
UCSC:uc007oxh.1 GeneTree:ENSGT00700000104273 InParanoid:Q02591
NextBio:287051 Bgee:Q02591 CleanEx:MM_GSC Genevestigator:Q02591
GermOnline:ENSMUSG00000021095 Uniprot:Q02591
Length = 256
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>UNIPROTKB|G3V7E7 [details] [associations]
symbol:Gsc "Protein Gsc" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042474
"middle ear morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048644 "muscle
organ morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:631425 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:CH473982 CTD:145258 KO:K09324 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 RefSeq:NP_001178802.1
UniGene:Rn.198763 UniGene:Rn.228175 Ensembl:ENSRNOT00000014204
GeneID:317715 KEGG:rno:317715 NextBio:672077 Uniprot:G3V7E7
Length = 256
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>UNIPROTKB|F1PZZ7 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
NextBio:20856981 Uniprot:F1PZZ7
Length = 317
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 212 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 270
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 271 -HKLPNTKMRSSN 282
>UNIPROTKB|E1BB15 [details] [associations]
symbol:GSC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0048644 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048704 GO:GO:0030178
GO:GO:0021904 GO:GO:0023019 GO:GO:0042474 CTD:145258 KO:K09324
OMA:PVGPSCC GeneTree:ENSGT00700000104273 EMBL:DAAA02053078
IPI:IPI00718229 RefSeq:NP_001179315.1 UniGene:Bt.106434
Ensembl:ENSBTAT00000013736 GeneID:514862 KEGG:bta:514862
NextBio:20871542 Uniprot:E1BB15
Length = 257
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 159 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 218
Query: 134 Q 134
Q
Sbjct: 219 Q 219
>UNIPROTKB|P56915 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0023019 "signal transduction involved in regulation of gene
expression" evidence=IEA] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0007369 "gastrulation" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0042474 "middle ear morphogenesis" evidence=ISS] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=ISS]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0048644 GO:GO:0003677
GO:GO:0043565 GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0048704
GO:GO:0030178 GO:GO:0007369 GO:GO:0021904 GO:GO:0023019
GO:GO:0001103 GO:GO:0042474 HOGENOM:HOG000112823 CTD:145258
eggNOG:NOG247162 HOVERGEN:HBG005921 KO:K09324 OrthoDB:EOG46Q6T9
OMA:PVGPSCC EMBL:AY177407 EMBL:BC063580 IPI:IPI00011923 PIR:A54677
RefSeq:NP_776248.1 UniGene:Hs.440438 PDB:2DMU PDBsum:2DMU
ProteinModelPortal:P56915 SMR:P56915 STRING:P56915
PhosphoSite:P56915 DMDM:61252078 PRIDE:P56915
Ensembl:ENST00000238558 GeneID:145258 KEGG:hsa:145258
UCSC:uc001ydu.3 GeneCards:GC14M095234 HGNC:HGNC:4612 MIM:138890
neXtProt:NX_P56915 PharmGKB:PA29004 InParanoid:P56915
PhylomeDB:P56915 EvolutionaryTrace:P56915 GenomeRNAi:145258
NextBio:85059 Bgee:P56915 CleanEx:HS_GSC Genevestigator:P56915
GermOnline:ENSG00000133937 Uniprot:P56915
Length = 257
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>UNIPROTKB|A1YEY5 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9595
"Gorilla gorilla gorilla" [GO:0042474 "middle ear morphogenesis"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042474 HOVERGEN:HBG005921
OrthoDB:EOG46Q6T9 EMBL:DQ976489 RefSeq:XP_004055692.1
ProteinModelPortal:A1YEY5 SMR:A1YEY5 GeneID:101153454 OMA:PVGPSCC
Uniprot:A1YEY5
Length = 257
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>UNIPROTKB|A1YFI3 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:78454
"Saguinus labiatus" [GO:0042474 "middle ear morphogenesis"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042474 HOVERGEN:HBG005921
EMBL:DQ976992 ProteinModelPortal:A1YFI3 SMR:A1YFI3 Uniprot:A1YFI3
Length = 257
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>UNIPROTKB|A1YG57 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9597 "Pan
paniscus" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042474 CTD:145258 HOVERGEN:HBG005921
KO:K09324 EMBL:DQ977221 RefSeq:XP_003832877.1
ProteinModelPortal:A1YG57 SMR:A1YG57 GeneID:100995285
KEGG:pps:100995285 Uniprot:A1YG57
Length = 257
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>UNIPROTKB|A2T733 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9598 "Pan
troglodytes" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0048644 GO:GO:0043565 GO:GO:0030900 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0048704 GO:GO:0030178 GO:GO:0021904 GO:GO:0023019
GO:GO:0042474 HOGENOM:HOG000112823 CTD:145258 eggNOG:NOG247162
HOVERGEN:HBG005921 KO:K09324 OrthoDB:EOG46Q6T9 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:DQ977363 RefSeq:NP_001074955.1
UniGene:Ptr.6559 ProteinModelPortal:A2T733 SMR:A2T733
Ensembl:ENSPTRT00000012313 GeneID:467546 KEGG:ptr:467546
InParanoid:A2T733 NextBio:20845425 Uniprot:A2T733
Length = 257
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>UNIPROTKB|A2T7P4 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9600 "Pongo
pygmaeus" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042474 HOGENOM:HOG000112823 eggNOG:NOG247162
HOVERGEN:HBG005921 OrthoDB:EOG46Q6T9 EMBL:DQ977514
ProteinModelPortal:A2T7P4 SMR:A2T7P4 InParanoid:A2T7P4
Uniprot:A2T7P4
Length = 257
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+KR HR T +Q++ LE+LF+E +PD R +L++++ L +V+ WF+NRR + +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 134 Q 134
Q
Sbjct: 218 Q 218
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 45 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 104
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 105 ENQLHKGVLI 114
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 45 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 104
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 105 ENQLHKGVLI 114
>UNIPROTKB|F1N8W4 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02003404 EMBL:AADN02003405
IPI:IPI00603869 Ensembl:ENSGALT00000037808 Uniprot:F1N8W4
Length = 319
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR+KR + Q+ ELE FK+ + +R L+ + L QVK WFQN R +MK Q
Sbjct: 132 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 191
Query: 135 L-ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 176
++ ++QEN + + R A+ P+ G P G
Sbjct: 192 AKDKAAQQQMQQENGSCQQQQSPRRVAV--PVLVKDGKPCQAG 232
>UNIPROTKB|G3MXN5 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
Uniprot:G3MXN5
Length = 319
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 214 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 272
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 273 -HKLPNTKMRSSN 284
>UNIPROTKB|Q00056 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
Uniprot:Q00056
Length = 320
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 215 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 273
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 274 -HKLPNTKMRSSN 285
>UNIPROTKB|F1NZI9 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 IPI:IPI00579776 OMA:GVSMANS EMBL:AADN02026599
Ensembl:ENSGALT00000006733 Uniprot:F1NZI9
Length = 165
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 76 RKKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
+K+R +R T Q+Q LE +F+ +PD R EL++R+ L +V+ WFQNRR + +
Sbjct: 14 KKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR- 72
Query: 134 QLERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L + L ++ S A+ P+
Sbjct: 73 ---RNERAMLANRSASL-LKSYSQEAAIEQPM 100
>UNIPROTKB|Q90963 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 EMBL:X79695
IPI:IPI00579776 PIR:S49440 UniGene:Gga.53985
ProteinModelPortal:Q90963 SMR:Q90963 STRING:Q90963 eggNOG:NOG309174
InParanoid:Q90963 Uniprot:Q90963
Length = 165
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 76 RKKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
+K+R +R T Q+Q LE +F+ +PD R EL++R+ L +V+ WFQNRR + +
Sbjct: 14 KKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR- 72
Query: 134 QLERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L + L ++ S A+ P+
Sbjct: 73 ---RNERAMLANRSASL-LKSYSQEAAIEQPM 100
>UNIPROTKB|F1SHT2 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
Length = 329
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQVK WFQNRR + K
Sbjct: 222 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 280
Query: 135 LERHENSLLRQEN 147
+ N+ +R N
Sbjct: 281 -HKLPNTKMRSSN 292
>UNIPROTKB|F1NJ78 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 OMA:MRNSASA EMBL:AADN02003404
EMBL:AADN02003405 IPI:IPI00820181 Ensembl:ENSGALT00000032575
Uniprot:F1NJ78
Length = 345
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR+KR + Q+ ELE FK+ + +R L+ + L QVK WFQN R +MK Q
Sbjct: 158 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 217
Query: 135 L-ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 176
++ ++QEN + + R A+ P+ G P G
Sbjct: 218 AKDKAAQQQMQQENGSCQQQQSPRRVAV--PVLVKDGKPCQAG 258
>RGD|1586239 [details] [associations]
symbol:LOC691272 "similar to reproductive homeobox on X
chromosome, 11" species:10116 "Rattus norvegicus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
RGD:1586239 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00387867 Ensembl:ENSRNOT00000064531 Uniprot:F1M6S5
Length = 96
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 86 QQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSL 142
+Q+ EL+ +F+E +PD QR EL+K + +E VK WF RR +++ +H+ +L
Sbjct: 22 EQLLELDRVFEETQYPDALQRKELAKLINVEEYTVKIWFNKRRAKIR----KHQKAL 74
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P K+ +T Q ELE F + ++ +E++ LCL RQ+K WFQNRR MK
Sbjct: 3 PDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRR--MKW 60
Query: 134 QLERHENS 141
+ E + S
Sbjct: 61 KKEHKDES 68
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P K+ +T Q ELE F + ++ +E++ LCL RQ+K WFQNRR MK
Sbjct: 3 PDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRR--MKW 60
Query: 134 QLERHENS 141
+ E + S
Sbjct: 61 KKEHKDES 68
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 76 RKKRYHRHTPQQIQELESLFKE--CPHPDEKQRL------ELSKRLCLETRQVKFWFQNR 127
++K+ + T +Q++ LE F+E +PD K +L +LSK L L+ RQ+ WFQNR
Sbjct: 68 QEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNR 127
Query: 128 RTQMKTQLERHENSLLRQENDKLRAENMSIRDAM 161
+ + K + H LRQE D + E +++ +
Sbjct: 128 KARWKNKQLEHLYESLRQEFDIVSREKELLQEEL 161
>FB|FBgn0085396 [details] [associations]
symbol:CG34367 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014134 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GeneTree:ENSGT00700000104279
UniGene:Dm.26780 GeneID:5740879 KEGG:dme:Dmel_CG34367
FlyBase:FBgn0085396 GenomeRNAi:5740879 NextBio:20891918
RefSeq:NP_001097140.1 ProteinModelPortal:A8DYR8 SMR:A8DYR8
EnsemblMetazoa:FBtr0112592 UCSC:CG34367-RC InParanoid:A8DYR8
OrthoDB:EOG4M640D PhylomeDB:A8DYR8 Bgee:A8DYR8 Uniprot:A8DYR8
Length = 420
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 73 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
N +++ T Q+ ELE LF+E +PD R ELS+RL L +V+ WFQNRR + +
Sbjct: 189 NTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 248
Query: 133 TQLERHENSL 142
+HEN +
Sbjct: 249 ----KHENQM 254
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R++ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K
Sbjct: 73 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 132
Query: 134 QLERHENSLLRQENDKLRAE 153
+ + + +QE + A+
Sbjct: 133 ENNKDKFPASKQEGKEGEAK 152
>UNIPROTKB|E1B8D8 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
Length = 238
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR MK
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR--MKW 185
Query: 134 QLERHENS 141
+ E E S
Sbjct: 186 KKEHKEES 193
>UNIPROTKB|F1LWY9 [details] [associations]
symbol:F1LWY9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 IPI:IPI00957183
Ensembl:ENSRNOT00000067861 Uniprot:F1LWY9
Length = 181
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R++ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K
Sbjct: 86 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWKK 145
Query: 134 QLERHENSLLRQE 146
+ R + R E
Sbjct: 146 ENNRDKFPASRPE 158
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 150 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKD 208
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA 173
+ N+ +R N + ++ I A + GPA
Sbjct: 209 -HKLPNTKIRS-NPSSSSASLQIPPAASQ---SRSSGPA 242
>UNIPROTKB|Q9Y2V3 [details] [associations]
symbol:RAX "Retinal homeobox protein Rx" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007601 "visual perception" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 Orphanet:2542 EMBL:AC067859 CleanEx:HS_RAX
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062 KO:K09332
EMBL:AF115392 IPI:IPI00021025 RefSeq:NP_038463.2 UniGene:Hs.278957
ProteinModelPortal:Q9Y2V3 SMR:Q9Y2V3 STRING:Q9Y2V3
PhosphoSite:Q9Y2V3 DMDM:296452886 PaxDb:Q9Y2V3 PRIDE:Q9Y2V3
DNASU:30062 Ensembl:ENST00000334889 GeneID:30062 KEGG:hsa:30062
UCSC:uc002lhx.3 GeneCards:GC18M056909 H-InvDB:HIX0202674
HGNC:HGNC:18662 MIM:601881 MIM:611038 neXtProt:NX_Q9Y2V3
PharmGKB:PA38626 InParanoid:Q9Y2V3 OMA:CGPGFGD PhylomeDB:Q9Y2V3
ChiTaRS:RAX GenomeRNAi:30062 NextBio:52852 ArrayExpress:Q9Y2V3
Bgee:Q9Y2V3 Genevestigator:Q9Y2V3 GermOnline:ENSG00000134438
Uniprot:Q9Y2V3
Length = 346
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 74 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 131
P +K R +R T Q+ ELE F++ +PD R EL+ ++ L +V+ WFQNRR +
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKW 191
Query: 132 KTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT---NCGGPAIIGDISLE 181
+ Q E+ E S ++ ++ L + + S A +P+ + GGPA G + LE
Sbjct: 192 RRQ-EKLEVSSMKLQDSPLLSFSRSPPSATLSPLGAGPGSGGGPAG-GALPLE 242
>WB|WBGene00020485 [details] [associations]
symbol:ceh-54 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:FO080546 HSSP:P06601
GeneTree:ENSGT00700000104256 PIR:T16866 RefSeq:NP_509037.1
UniGene:Cel.367 ProteinModelPortal:Q22459 SMR:Q22459 DIP:DIP-24677N
IntAct:Q22459 MINT:MINT-1110113 EnsemblMetazoa:T13C5.4
GeneID:188474 KEGG:cel:CELE_T13C5.4 UCSC:T13C5.4 CTD:188474
WormBase:T13C5.4 eggNOG:NOG295926 HOGENOM:HOG000020434
InParanoid:Q22459 OMA:ATRDSEN NextBio:938936 Uniprot:Q22459
Length = 220
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 73 NPPRKKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 130
NP RKKR +R T QI E+E +F E +PD R +L+ ++ L +V+ WFQNRR +
Sbjct: 40 NPDRKKR-NRITFDANQIDEMEKVFAENQYPDTMSREKLANKIQLHEERVQIWFQNRRAK 98
Query: 131 MKTQ 134
+ +
Sbjct: 99 YRRE 102
>UNIPROTKB|P13378 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008595 "anterior/posterior axis specification,
embryo" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0048705 EMBL:AC009336
HOVERGEN:HBG016849 eggNOG:NOG314669 KO:K09308 CTD:3234
EMBL:AY014304 EMBL:AY014303 EMBL:AL520835 EMBL:BC038709
EMBL:BC090853 EMBL:X15507 IPI:IPI00008481 IPI:IPI00916034
IPI:IPI01018181 PIR:B32830 RefSeq:NP_001186675.1 RefSeq:NP_062458.1
UniGene:Hs.301963 ProteinModelPortal:P13378 SMR:P13378
MINT:MINT-7032137 STRING:P13378 PhosphoSite:P13378 DMDM:13124737
PRIDE:P13378 Ensembl:ENST00000313173 Ensembl:ENST00000429017
Ensembl:ENST00000450510 Ensembl:ENST00000544999 GeneID:3234
KEGG:hsa:3234 UCSC:uc002uko.3 GeneCards:GC02P176958 HGNC:HGNC:5139
MIM:142985 neXtProt:NX_P13378 PharmGKB:PA29413 InParanoid:P13378
OMA:GQEYFHP GenomeRNAi:3234 NextBio:12869 ArrayExpress:P13378
Bgee:P13378 CleanEx:HS_HOXD8 Genevestigator:P13378
GermOnline:ENSG00000175879 Uniprot:P13378
Length = 290
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 14 QQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXN 73
Q+QP Q +L +S G IG ED +H ++S S +
Sbjct: 143 QRQPIFTTQQEAELVQYPDCKSSSGNIG----EDP-DHLNQSSSPSQMFPWMRPQAA--- 194
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R++ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K
Sbjct: 195 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 254
Query: 134 QLERHENSLLRQE 146
+ + + + RQE
Sbjct: 255 ENNKDKFPVSRQE 267
>UNIPROTKB|Q28ET4 [details] [associations]
symbol:vent1 "Homeobox protein vent1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001707 "mesoderm formation" evidence=ISS] [GO:0030509 "BMP
signaling pathway" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048264
"determination of ventral identity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030509 GO:GO:0001707 GO:GO:0048264 HOVERGEN:HBG082072
CTD:100037246 EMBL:AY187017 EMBL:AC149072 EMBL:CR762353
RefSeq:NP_988861.1 UniGene:Str.47850 ProteinModelPortal:Q28ET4
STRING:Q28ET4 Ensembl:ENSXETT00000019491 GeneID:394455
KEGG:xtr:394455 Xenbase:XB-GENE-920868 eggNOG:NOG310807
GeneTree:ENSGT00610000086217 InParanoid:Q804C8 OMA:TIDWILA
OrthoDB:EOG44TP97 Bgee:Q28ET4 Uniprot:Q28ET4
Length = 262
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 17 PNIDNQGGGDLQLQRMGESFEGI--IGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNP 74
P + G + G +G GR S+E+ EH S+S ++
Sbjct: 81 PALHRSSGSSDEFSPAGSEDDGTESSGRNSQENDTEHRSKSPKSDLQ------------- 127
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
R+ R TPQQI LE F + + +R +L+ L L QVK WFQNRR ++K Q
Sbjct: 128 -RRLRT-AFTPQQITRLEQAFNKQRYLGASERKKLATSLQLSEIQVKTWFQNRRMKLKRQ 185
Query: 135 LERHENSLL 143
++ ++S++
Sbjct: 186 IQDQQHSMV 194
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 115 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 174
Query: 135 LER-HENSLL 143
+ H+ +L
Sbjct: 175 ENQMHKGVIL 184
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175
Query: 135 LER-HENSLL 143
+ H+ +L
Sbjct: 176 ENQMHKGVIL 185
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 156 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 214
Query: 135 LERHENSLLR 144
R N+ +R
Sbjct: 215 -HRLPNTKVR 223
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 156 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 214
Query: 135 LERHENSLLR 144
R N+ +R
Sbjct: 215 -HRLPNTKVR 223
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 156 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 214
Query: 135 LERHENSLLR 144
R N+ +R
Sbjct: 215 -HRLPNTKVR 223
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 156 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 214
Query: 135 LERHENSLLR 144
R N+ +R
Sbjct: 215 -HRLPNTKVR 223
>UNIPROTKB|Q91926 [details] [associations]
symbol:vent1 "Homeobox protein vent1" species:8355 "Xenopus
laevis" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0001707 "mesoderm
formation" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
[GO:0030509 "BMP signaling pathway" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048264 "determination of ventral identity" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0030509 GO:GO:0001707 GO:GO:0048264 HSSP:P06602
HOVERGEN:HBG082072 EMBL:X92851 PIR:S66151 RefSeq:NP_001091390.1
UniGene:Xl.51158 ProteinModelPortal:Q91926 SMR:Q91926
GeneID:100037246 KEGG:xla:100037246 CTD:100037246
Xenbase:XB-GENE-920881 Uniprot:Q91926
Length = 264
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 44 SREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELESLFKECPHPDE 103
S +D E RS +N + R+ R TPQQI +LE F + +
Sbjct: 100 SEDDSTESSGRSSQEN--DTEQREKSPKSDLQRRLRT-AFTPQQISKLEQAFNKQRYLGA 156
Query: 104 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 143
+R +L+ L L QVK WFQNRR ++K Q++ ++SL+
Sbjct: 157 PERKKLATSLQLSEIQVKTWFQNRRMKLKRQIQDKQHSLV 196
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 156 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD 214
Query: 135 LERHENSLLR 144
R N+ +R
Sbjct: 215 -HRLPNTKVR 223
>UNIPROTKB|F1NB58 [details] [associations]
symbol:F1NB58 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104273
EMBL:AADN02043256 IPI:IPI00577076 Ensembl:ENSGALT00000009428
ArrayExpress:F1NB58 Uniprot:F1NB58
Length = 196
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+ R HR T +Q+Q LE+LF + +PD R L+ R+ L+ +V+ WF+NRR + +
Sbjct: 115 RRTRRHRTIFTEEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAKWRH 174
Query: 134 QLERHENSLLRQ 145
Q ++L+ Q
Sbjct: 175 QKRASASALVLQ 186
>ZFIN|ZDB-GENE-040426-1457 [details] [associations]
symbol:shox2 "short stature homeobox 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040426-1457 GO:GO:0005634 GO:GO:0007507 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 HSSP:P06601 CTD:6474 eggNOG:NOG113578
HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2 EMBL:BX004974
EMBL:BC056324 EMBL:BC065345 IPI:IPI00491363 RefSeq:NP_957490.1
UniGene:Dr.26980 SMR:Q7SZN8 Ensembl:ENSDART00000009564
GeneID:394171 KEGG:dre:394171 InParanoid:Q7SZN8 NextBio:20815116
Uniprot:Q7SZN8
Length = 299
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 107 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 166
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 167 ENQLHKGVLI 176
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175
Query: 135 LER-HENSLL 143
+ H+ +L
Sbjct: 176 ENQMHKGVIL 185
>UNIPROTKB|F1NM26 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
Length = 302
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 36/98 (36%), Positives = 50/98 (51%)
Query: 38 GIIGRRSREDLLEHESRSG---SDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELESL 94
G GR++ + E E RSG SD+ + PRK+R T +QI+ELE+
Sbjct: 146 GDYGRQALSPV-ETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAE 203
Query: 95 FKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
F + +R E++ L L RQVK WFQNRR + K
Sbjct: 204 FAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 241
>UNIPROTKB|F1NZL9 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00660000095141 OMA:RRIRMRR
EMBL:AADN02056979 EMBL:AADN02056980 IPI:IPI00821562
Ensembl:ENSGALT00000038656 Uniprot:F1NZL9
Length = 78
Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR+ R T +Q+ LE+ F+ + +RL L+ L L QVK WFQNRRT+ K Q
Sbjct: 15 PRRART-AFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 73
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 84 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 143
+P Q+ LE F++ + +R +L+ L L QVK WFQNRRT+ K Q E S
Sbjct: 44 SPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDS 103
Query: 144 RQE 146
+Q+
Sbjct: 104 QQK 106
>ZFIN|ZDB-GENE-051030-21 [details] [associations]
symbol:shox "short stature homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
Uniprot:F1Q5T6
Length = 304
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 108 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 167
Query: 135 LER-HENSLL 143
+ H+ +L
Sbjct: 168 ENQMHKGVIL 177
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 36/102 (35%), Positives = 52/102 (50%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK- 132
PPRKK R T +Q + LE F++ + KQ+ L+K L L RQ++ WFQNRR + K
Sbjct: 136 PPRKKL--RLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKL 193
Query: 133 --TQLE----RHENSLLRQENDKLRAENMSIRDAMRNPICTN 168
T++E + L +EN +L E +R P N
Sbjct: 194 KQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTVN 235
>UNIPROTKB|F1S4R4 [details] [associations]
symbol:LOC100739572 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:CU462856
Ensembl:ENSSSCT00000011671 Uniprot:F1S4R4
Length = 253
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 20 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 77
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 175
++ ++S LR + A +R + + + G PA++
Sbjct: 78 -DQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALL 117
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 34/87 (39%), Positives = 49/87 (56%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKK R + Q LE FKE + KQ+L L+K+L L RQV+ WFQNRR + K +
Sbjct: 129 RKKL--RLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQ 186
Query: 136 ERHENSLLRQENDKLRAENMSI-RDAM 161
+ L++ +KL EN + ++AM
Sbjct: 187 TEVDCEYLKRCVEKLTEENRRLQKEAM 213
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 24/68 (35%), Positives = 44/68 (64%)
Query: 82 RHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHEN 140
R + +QI+ LE +F+ + ++++++++ L L+ RQV WFQN+R + KT QLE+ N
Sbjct: 33 RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYN 92
Query: 141 SLLRQEND 148
+L N+
Sbjct: 93 TLRANYNN 100
>UNIPROTKB|F6Y4K5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 CTD:6474 KO:K09331
OMA:CTEAGRD EMBL:AAEX03013721 Ensembl:ENSCAFT00000014128
RefSeq:XP_003639881.1 GeneID:485732 KEGG:cfa:485732 Uniprot:F6Y4K5
Length = 319
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 198
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 199 ENQLHKGVLI 208
>UNIPROTKB|I3L828 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
KO:K09331 OMA:CTEAGRD GO:GO:0003170 EMBL:FP312663
RefSeq:NP_001230281.1 UniGene:Ssc.38718 Ensembl:ENSSSCT00000025053
GeneID:100628206 KEGG:ssc:100628206 Uniprot:I3L828
Length = 321
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 141 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 200
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 201 ENQLHKGVLI 210
>UNIPROTKB|E1BLB9 [details] [associations]
symbol:E1BLB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 OMA:CTEAGRD
GO:GO:0003170 EMBL:DAAA02002472 IPI:IPI00838807 UniGene:Bt.59425
Ensembl:ENSBTAT00000044731 NextBio:20874258 Uniprot:E1BLB9
Length = 331
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 198
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 199 ENQLHKGVLI 208
>UNIPROTKB|O60902 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0003170
"heart valve development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0007507 "heart
development" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0007507 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
EMBL:AJ002367 EMBL:AJ002368 EMBL:BC008829 EMBL:AF022654
EMBL:AF023203 IPI:IPI00218369 IPI:IPI00295006 IPI:IPI00793628
RefSeq:NP_001157150.1 RefSeq:NP_003021.3 RefSeq:NP_006875.2
UniGene:Hs.55967 ProteinModelPortal:O60902 SMR:O60902 IntAct:O60902
STRING:O60902 PhosphoSite:O60902 PaxDb:O60902 PRIDE:O60902
DNASU:6474 Ensembl:ENST00000389589 Ensembl:ENST00000425436
GeneID:6474 KEGG:hsa:6474 UCSC:uc003fbr.3 UCSC:uc003fbs.3
UCSC:uc010hvw.3 CTD:6474 GeneCards:GC03M157813 HGNC:HGNC:10854
MIM:602504 neXtProt:NX_O60902 PharmGKB:PA35756 eggNOG:NOG113578
HOVERGEN:HBG007233 InParanoid:O60902 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 GenomeRNAi:6474 NextBio:25151 ArrayExpress:O60902
Bgee:O60902 CleanEx:HS_SHOX2 Genevestigator:O60902
GermOnline:ENSG00000168779 Uniprot:O60902
Length = 331
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 198
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 199 ENQLHKGVLI 208
>MGI|MGI:1201673 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002062 "chondrocyte
differentiation" evidence=IMP] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IMP]
[GO:0032330 "regulation of chondrocyte differentiation"
evidence=IMP] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0048743
"positive regulation of skeletal muscle fiber development"
evidence=IMP] [GO:0050772 "positive regulation of axonogenesis"
evidence=IMP] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IMP] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IMP] [GO:0060415 "muscle
tissue morphogenesis" evidence=IMP] [GO:2000172 "regulation of
branching morphogenesis of a nerve" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:U66918 MGI:MGI:1201673
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 EMBL:U67055 EMBL:U65071 EMBL:U65072
IPI:IPI00230342 IPI:IPI00625691 RefSeq:NP_038693.1 UniGene:Mm.39093
ProteinModelPortal:P70390 SMR:P70390 STRING:P70390
PhosphoSite:P70390 PRIDE:P70390 Ensembl:ENSMUST00000029422
Ensembl:ENSMUST00000162060 Ensembl:ENSMUST00000162439 GeneID:20429
KEGG:mmu:20429 UCSC:uc008pld.1 UCSC:uc008ple.1 InParanoid:P70390
NextBio:298446 Bgee:P70390 CleanEx:MM_SHOX2 Genevestigator:P70390
GermOnline:ENSMUSG00000027833 GO:GO:0003170 Uniprot:P70390
Length = 331
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 198
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 199 ENQLHKGVLI 208
>UNIPROTKB|E2QZN5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 Ensembl:ENSCAFT00000014128 Uniprot:E2QZN5
Length = 334
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
K+R R T +Q+ ELE LF E +PD R ELS+RL L +V+ WFQNRR + + Q
Sbjct: 142 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 201
Query: 135 LER-HENSLL 143
+ H+ L+
Sbjct: 202 ENQLHKGVLI 211
>UNIPROTKB|P24343 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GeneTree:ENSGT00700000104263 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:X62019 EMBL:D10289
IPI:IPI00598647 PIR:A45186 PIR:C37914 PIR:S14800 RefSeq:NP_990580.1
UniGene:Gga.695 ProteinModelPortal:P24343 IntAct:P24343
STRING:P24343 Ensembl:ENSGALT00000015086 GeneID:396178
KEGG:gga:396178 CTD:3238 eggNOG:NOG241833 InParanoid:P24343
OMA:PDGLPWG OrthoDB:EOG43N7DG NextBio:20816232 Uniprot:P24343
Length = 266
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QQI ELE+ F + ++R ELS RL L +QVK WFQNRR + K +
Sbjct: 199 RKKR-KPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 257
Query: 136 ERHE 139
R +
Sbjct: 258 MREQ 261
>UNIPROTKB|P35452 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 EMBL:CH471058 GO:GO:0007389
GO:GO:0042733 GO:GO:0000228 EMBL:AC009336 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:AF154915 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG IPI:IPI00784701
PIR:C39065 RefSeq:NP_067016.3 UniGene:Hs.450028
ProteinModelPortal:P35452 SMR:P35452 STRING:P35452
PhosphoSite:P35452 DMDM:259016345 PRIDE:P35452
Ensembl:ENST00000406506 GeneID:3238 KEGG:hsa:3238 UCSC:uc010zev.1
GeneCards:GC02P176930 H-InvDB:HIX0029976 HGNC:HGNC:5135 MIM:142988
neXtProt:NX_P35452 PharmGKB:PA29409 InParanoid:P35452
GenomeRNAi:3238 NextBio:12887 ArrayExpress:P35452 CleanEx:HS_HOXD12
Genevestigator:P35452 GermOnline:ENSG00000170178 Uniprot:P35452
Length = 270
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QQI ELE+ F + ++R ELS RL L +QVK WFQNRR + K +
Sbjct: 203 RKKR-KPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 261
Query: 136 ERHE 139
R +
Sbjct: 262 LREQ 265
>MGI|MGI:109632 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109632 GO:GO:0005634 EMBL:CH466528
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 eggNOG:NOG261733 GO:GO:0021854
GeneTree:ENSGT00700000104256 CleanEx:MM_RAX HOVERGEN:HBG021349
OrthoDB:EOG4V4387 CTD:30062 KO:K09332 OMA:CGPGFGD ChiTaRS:RAX
EMBL:AF001906 EMBL:U73177 EMBL:BC024731 EMBL:BC058757
IPI:IPI00132598 RefSeq:NP_038861.2 UniGene:Mm.489746
ProteinModelPortal:O35602 SMR:O35602 STRING:O35602
PhosphoSite:O35602 PRIDE:O35602 Ensembl:ENSMUST00000025396
GeneID:19434 KEGG:mmu:19434 InParanoid:Q6GT92 NextBio:296571
Bgee:O35602 Genevestigator:O35602 GermOnline:ENSMUSG00000024518
Uniprot:O35602
Length = 342
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 34/100 (34%), Positives = 56/100 (56%)
Query: 74 PPRKK-RYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 130
PP+KK R +R T Q+ ELE F++ +PD R EL+ ++ L +V+ WFQNRR +
Sbjct: 131 PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAK 190
Query: 131 MKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCG 170
+ Q E+ E S ++ ++ L + + S + P+ T G
Sbjct: 191 WRRQ-EKLEVSSMKLQDSPLLSFSRSPPSSALAPLGTGPG 229
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
RKKR +T Q ELE F + +R E+++ L L RQVK WFQNRR +MK
Sbjct: 2 RKKRCP-YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
RKKR +T Q ELE F + +R E+++ L L RQVK WFQNRR +MK
Sbjct: 47 RKKRCP-YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 102
>ZFIN|ZDB-GENE-030131-6336 [details] [associations]
symbol:zgc:171531 "zgc:171531" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030131-6336 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 HOVERGEN:HBG006689 OMA:FSHSAMG
EMBL:BX322615 EMBL:BC162156 EMBL:BC162157 IPI:IPI00508292
UniGene:Dr.107185 Ensembl:ENSDART00000110871 Uniprot:B3DFT3
Length = 345
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR+KR + Q+ ELE FK+ + +R L+ + L QVK WFQN R +MK Q
Sbjct: 159 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 218
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGP 172
+ L+QE + + + R A+ P+ G P
Sbjct: 219 AKDKAAQQLQQEGNLCQQQQSPRRVAV--PVLVKDGKP 254
>ZFIN|ZDB-GENE-010404-1 [details] [associations]
symbol:nkx2.1b "NK2 homeobox 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-010404-1 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P23441 HOVERGEN:HBG006689
KO:K09342 EMBL:AF321112 IPI:IPI00487938 RefSeq:NP_571851.1
UniGene:Dr.78792 ProteinModelPortal:Q98TX4 SMR:Q98TX4 PRIDE:Q98TX4
GeneID:81883 KEGG:dre:81883 CTD:81883 InParanoid:Q98TX4
NextBio:20934177 ArrayExpress:Q98TX4 Bgee:Q98TX4 Uniprot:Q98TX4
Length = 346
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR+KR + Q+ ELE FK+ + +R L+ + L QVK WFQN R +MK Q
Sbjct: 158 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 217
Query: 135 L-ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGP 172
++ ++Q+N + + S R + P+ G P
Sbjct: 218 AKDKVSQQQMQQDNGSCQQQQQSPR-RVAVPVLVKDGKP 255
>MGI|MGI:96179 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
"negative regulation of leukocyte migration" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
differentiation" evidence=ISO] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
CleanEx:MM_HOXA7 Genevestigator:P02830
GermOnline:ENSMUSG00000038236 Uniprot:P02830
Length = 229
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR MK
Sbjct: 127 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR--MKW 184
Query: 134 QLERHENS 141
+ E + S
Sbjct: 185 KKEHKDES 192
>UNIPROTKB|Q8N693 [details] [associations]
symbol:ESX1 "Homeobox protein ESX1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051726
"regulation of cell cycle" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726
EMBL:CH471120 GO:GO:0060716 InterPro:IPR013847 PRINTS:PR00028
GO:GO:0060713 EMBL:AY114148 EMBL:AL049631 EMBL:BC042633
EMBL:BC053599 IPI:IPI00166966 RefSeq:NP_703149.1 UniGene:Hs.223782
ProteinModelPortal:Q8N693 SMR:Q8N693 IntAct:Q8N693 STRING:Q8N693
PhosphoSite:Q8N693 DMDM:116241356 PRIDE:Q8N693
Ensembl:ENST00000372588 GeneID:80712 KEGG:hsa:80712 UCSC:uc004ely.3
CTD:80712 GeneCards:GC0XM103494 HGNC:HGNC:14865 HPA:HPA051992
MIM:300154 neXtProt:NX_Q8N693 PharmGKB:PA27892 eggNOG:NOG264325
HOGENOM:HOG000198273 HOVERGEN:HBG084082 InParanoid:Q8N693
OMA:MAPVPPW OrthoDB:EOG4MKNHC PhylomeDB:Q8N693 GenomeRNAi:80712
NextBio:71013 ArrayExpress:Q8N693 Bgee:Q8N693 CleanEx:HS_ESX1
Genevestigator:Q8N693 GermOnline:ENSG00000123576 Uniprot:Q8N693
Length = 406
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 74 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 131
PP +KR R T Q+QELE+ F E +PD R L+ RL L +V+ WFQNRR +
Sbjct: 135 PPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKW 194
Query: 132 K 132
K
Sbjct: 195 K 195
>UNIPROTKB|F1P2X4 [details] [associations]
symbol:F1P2X4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 OMA:GRRAVQC EMBL:AADN02043256
IPI:IPI00821082 Ensembl:ENSGALT00000038541 ArrayExpress:F1P2X4
Uniprot:F1P2X4
Length = 214
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 76 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
R+ R HR T +Q+Q LE+LF + +PD R L+ R+ L+ +V+ WF+NRR + +
Sbjct: 133 RRTRRHRTIFTEEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAKWRH 192
Query: 134 QLERHENSLLRQ 145
Q ++L+ Q
Sbjct: 193 QKRASASALVLQ 204
>ZFIN|ZDB-GENE-000223-14 [details] [associations]
symbol:phox2a "paired-like homeobox 2a" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007420 "brain development" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000223-14 GO:GO:0005634
GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104256 EMBL:CU633849
IPI:IPI00511129 Ensembl:ENSDART00000002384 Bgee:F1RCT9
Uniprot:F1RCT9
Length = 280
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 73 NPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 130
N RK+R R T Q++ELE +F E +PD R EL+ ++ L +V+ WFQNRR +
Sbjct: 87 NEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 146
Query: 131 MKTQLERHENS 141
+ Q ER NS
Sbjct: 147 FRKQ-ERAANS 156
>UNIPROTKB|I3L564 [details] [associations]
symbol:I3L564 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 Ensembl:ENSSSCT00000023533
Uniprot:I3L564
Length = 281
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 38 GIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELESLFKE 97
G+ +S +L GS+ + RKKR +T Q ELE F
Sbjct: 188 GVERGQSSPELERSRDEEGSEEIKAENTTGNWLTAKSGRKKRCP-YTKHQTLELEKEFLF 246
Query: 98 CPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
+ ++RLE+SK + L RQVK WFQNRR ++K
Sbjct: 247 NMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLK 281
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P K+ +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 164 PEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 222
>UNIPROTKB|Q9NZR4 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL080312 GO:GO:0060040
GO:GO:0042551 Orphanet:98973 eggNOG:NOG237888 InterPro:IPR023339
PROSITE:PS51496 CTD:30813 HOVERGEN:HBG036251 KO:K09335 OMA:WGSDHLK
EMBL:AF176797 EMBL:AF251033 EMBL:AF251034 EMBL:DQ854807
EMBL:DQ854808 EMBL:DQ854809 EMBL:DQ854810 EMBL:DQ854811
EMBL:DQ854812 EMBL:BC126228 EMBL:BC136497 EMBL:GU138372
IPI:IPI00165074 IPI:IPI00215633 IPI:IPI00215634 IPI:IPI00215635
IPI:IPI00886819 IPI:IPI00909178 IPI:IPI00915914 IPI:IPI00943354
RefSeq:NP_001243200.1 RefSeq:NP_001243201.1 RefSeq:NP_055403.2
RefSeq:NP_955457.1 UniGene:Hs.274264 ProteinModelPortal:Q9NZR4
SMR:Q9NZR4 STRING:Q9NZR4 PhosphoSite:Q9NZR4 DMDM:25009572
PRIDE:Q9NZR4 Ensembl:ENST00000376707 Ensembl:ENST00000376709
Ensembl:ENST00000398332 Ensembl:ENST00000409285
Ensembl:ENST00000409958 Ensembl:ENST00000424574
Ensembl:ENST00000429762 Ensembl:ENST00000444511
Ensembl:ENST00000451258 GeneID:30813 KEGG:hsa:30813 UCSC:uc002wuf.3
UCSC:uc002wug.1 UCSC:uc010gdd.2 UCSC:uc010gdf.2
GeneCards:GC20M025051 HGNC:HGNC:12723 MIM:122000 MIM:148300
MIM:605020 MIM:614195 neXtProt:NX_Q9NZR4 Orphanet:2335
PharmGKB:PA37334 InParanoid:Q9NZR4 PhylomeDB:Q9NZR4
GenomeRNAi:30813 NextBio:52864 Bgee:Q9NZR4 CleanEx:HS_VSX1
Genevestigator:Q9NZR4 GermOnline:ENSG00000100987 Uniprot:Q9NZR4
Length = 365
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 34/109 (31%), Positives = 51/109 (46%)
Query: 40 IGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHR--HTPQQIQELESLFKE 97
+GR+ R D + S S D+ RKKR HR T Q++ELE F E
Sbjct: 129 LGRQKRSDSV---STSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSE 185
Query: 98 CPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQE 146
+PD R L+ + L +++ WFQNRR + + + +R S + E
Sbjct: 186 AHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 144 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 146 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 202
>UNIPROTKB|Q8NHV9 [details] [associations]
symbol:RHOXF1 "Rhox homeobox family member 1" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0019953 "sexual reproduction"
evidence=IEP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0007276 "gamete generation"
evidence=NAS] [GO:0030518 "intracellular steroid hormone receptor
signaling pathway" evidence=NAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0007276 GO:GO:0030518 EMBL:AC005023
EMBL:AY099086 EMBL:BC069324 EMBL:BC069529 EMBL:BC103857
EMBL:BC103858 IPI:IPI00169348 RefSeq:NP_644811.1 UniGene:Hs.644617
ProteinModelPortal:Q8NHV9 SMR:Q8NHV9 IntAct:Q8NHV9 STRING:Q8NHV9
DMDM:37537960 PRIDE:Q8NHV9 DNASU:158800 Ensembl:ENST00000217999
GeneID:158800 KEGG:hsa:158800 UCSC:uc004esk.1 CTD:158800
GeneCards:GC0XM119243 HGNC:HGNC:29993 MIM:300446 neXtProt:NX_Q8NHV9
PharmGKB:PA162401287 eggNOG:NOG257474 HOGENOM:HOG000154120
InParanoid:Q8NHV9 OMA:NKRARCR OrthoDB:EOG4FFD33 PhylomeDB:Q8NHV9
GenomeRNAi:158800 NextBio:87811 Bgee:Q8NHV9 CleanEx:HS_RHOXF1
Genevestigator:Q8NHV9 GermOnline:ENSG00000101883 Uniprot:Q8NHV9
Length = 184
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR +R + T Q++ELES+F+ +PD R EL++ L + +V+ WF+N+R + +
Sbjct: 103 PRTRRT-KFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRVWFKNKRARCR-- 159
Query: 135 LERHENSLLRQENDKLRAE 153
RH+ L+ ++LRA+
Sbjct: 160 --RHQRELMLA--NELRAD 174
>ZFIN|ZDB-GENE-990415-238 [details] [associations]
symbol:rx3 "retinal homeobox gene 3" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0030900
"forebrain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0048593 "camera-type eye morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-238 GO:GO:0005634 GO:GO:0001708 GO:GO:0001755
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0021984 eggNOG:NOG261733
GO:GO:0048596 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 KO:K09332
EMBL:AF001909 IPI:IPI00493738 RefSeq:NP_571302.1 UniGene:Dr.540
ProteinModelPortal:O42358 SMR:O42358 STRING:O42358 GeneID:30474
KEGG:dre:30474 CTD:30474 InParanoid:O42358 NextBio:20806867
ArrayExpress:O42358 Uniprot:O42358
Length = 292
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 73 NPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 130
NP +K R +R T Q+ ELE F++ +PD R EL+ ++ L +V+ WFQNRR +
Sbjct: 101 NPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAK 160
Query: 131 MKTQLERHENSLLRQENDKL 150
+ Q + +S+ QE+ L
Sbjct: 161 WRRQEKLEVSSIKLQESSML 180
>UNIPROTKB|F6XRF4 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 KO:K09297 CTD:3238 OMA:PDGLPWG
Ensembl:ENSCAFT00000021306 EMBL:AAEX03017786 RefSeq:XP_545535.1
GeneID:488413 KEGG:cfa:488413 Uniprot:F6XRF4
Length = 270
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QQI ELE+ F + ++R ELS RL L +QVK WFQNRR + K +
Sbjct: 203 RKKR-KPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 261
Query: 136 ERHE 139
R +
Sbjct: 262 LREQ 265
>UNIPROTKB|F1RZG4 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001501 GO:GO:0007389 GO:GO:0042733
GeneTree:ENSGT00700000104263 KO:K09297 CTD:3238 OMA:PDGLPWG
EMBL:CU570829 RefSeq:XP_003483729.1 UniGene:Ssc.74532
Ensembl:ENSSSCT00000017401 GeneID:100158034 KEGG:ssc:100158034
Uniprot:F1RZG4
Length = 270
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QQI ELE+ F + ++R ELS RL L +QVK WFQNRR + K +
Sbjct: 203 RKKR-KPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 261
Query: 136 ERHE 139
R +
Sbjct: 262 LREQ 265
>RGD|620371 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00033
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 74 PPRKK-RYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 130
PP+KK R +R T Q+ ELE F++ +PD R EL+ ++ L +V+ WFQNRR +
Sbjct: 132 PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAK 191
Query: 131 MKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGP 172
+ Q E+ E S ++ ++ L + + S + P+ GGP
Sbjct: 192 WRRQ-EKLEVSSMKLQDSPLLSFSRSPPSSALAPL----GGP 228
>UNIPROTKB|Q9JLT7 [details] [associations]
symbol:Rax "Retinal homeobox protein Rx" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00033
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 74 PPRKK-RYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 130
PP+KK R +R T Q+ ELE F++ +PD R EL+ ++ L +V+ WFQNRR +
Sbjct: 132 PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAK 191
Query: 131 MKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGP 172
+ Q E+ E S ++ ++ L + + S + P+ GGP
Sbjct: 192 WRRQ-EKLEVSSMKLQDSPLLSFSRSPPSSALAPL----GGP 228
>UNIPROTKB|E1BE99 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001501 GO:GO:0007389 GO:GO:0042733
GeneTree:ENSGT00700000104263 OMA:PDGLPWG EMBL:DAAA02004174
IPI:IPI00692097 Ensembl:ENSBTAT00000005652 Uniprot:E1BE99
Length = 271
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QQI ELE+ F + ++R ELS RL L +QVK WFQNRR + K +
Sbjct: 204 RKKR-KPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 262
Query: 136 ERHE 139
R +
Sbjct: 263 LREQ 266
>UNIPROTKB|F1RQG1 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:GVSMANS EMBL:CU915659 Ensembl:ENSSSCT00000006245 Uniprot:F1RQG1
Length = 211
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 76 RKKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
+K+R +R T Q+Q LE +F+ +PD R EL++R+ L +V+ WFQNRR + +
Sbjct: 60 KKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR- 118
Query: 134 QLERHENSLLRQENDKLRAENMSIRDAMRNPI 165
R+E ++L + L ++ S A+ P+
Sbjct: 119 ---RNERAMLANRSASL-LKSYSQEAAIEQPV 146
>UNIPROTKB|Q9TT89 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 eggNOG:NOG238660 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AF200721 IPI:IPI00699636 RefSeq:NP_776767.1
UniGene:Bt.91790 ProteinModelPortal:Q9TT89 SMR:Q9TT89 PRIDE:Q9TT89
GeneID:281820 KEGG:bta:281820 CTD:3217 InParanoid:Q9TT89
NextBio:20805731 Uniprot:Q9TT89
Length = 217
Score = 112 (44.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K +
Sbjct: 137 RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
Score = 44 (20.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 266 SGPGVTGLDRS 276
SGPG TG DR+
Sbjct: 199 SGPGTTGQDRA 209
>UNIPROTKB|F1SMS6 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
Length = 347
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 38/113 (33%), Positives = 61/113 (53%)
Query: 74 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 131
P +K R +R T Q+ ELE F++ +PD R EL+ ++ L +V+ WFQNRR +
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKW 192
Query: 132 KTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTN---CGGPAIIGDISLE 181
+ Q E+ E S ++ ++ L + + S A P+ + GGPA G + LE
Sbjct: 193 RRQ-EKLEVSSMKLQDSPLLSFSRSPPAAALAPLGASPEGSGGPAG-GALPLE 243
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 114 (45.2 bits), Expect = 0.00035, P = 0.00035
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P R++ ++ Q ELE F P+ K+R+E+S L L RQVK WFQNRR + K
Sbjct: 93 PGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 152
Query: 134 QLERHENSLLRQENDKLRAE 153
+ + + +QE + A+
Sbjct: 153 ENNKDKFPASKQEGKEGEAK 172
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 161 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>MGI|MGI:96208 [details] [associations]
symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
Genevestigator:P10628 Uniprot:P10628
Length = 250
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 152 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 161 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>UNIPROTKB|P31268 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048863 "stem cell differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0001525
"angiogenesis" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IDA] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IDA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122
GO:GO:0001953 GO:GO:0048704 eggNOG:NOG238660 EMBL:AC004080
HOVERGEN:HBG016849 CTD:3204 KO:K09307 EMBL:AF026397 EMBL:AJ005814
EMBL:AF032095 EMBL:X84803 EMBL:X84804 EMBL:U92543 IPI:IPI00010743
PIR:S15536 RefSeq:NP_008827.2 UniGene:Hs.610216 UniGene:Hs.660918
ProteinModelPortal:P31268 SMR:P31268 IntAct:P31268 STRING:P31268
PhosphoSite:P31268 DMDM:311033439 PRIDE:P31268 DNASU:3204
Ensembl:ENST00000242159 GeneID:3204 KEGG:hsa:3204 UCSC:uc003sys.3
GeneCards:GC07M027193 HGNC:HGNC:5108 MIM:142950 neXtProt:NX_P31268
PharmGKB:PA29385 InParanoid:P31268 OMA:EHKDEGP OrthoDB:EOG4C87V5
PhylomeDB:P31268 GenomeRNAi:3204 NextBio:12748 ArrayExpress:P31268
Bgee:P31268 CleanEx:HS_HOXA7 Genevestigator:P31268
GermOnline:ENSG00000122592 GO:GO:0045617 GO:GO:0045656
Uniprot:P31268
Length = 230
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 134 Q 134
+
Sbjct: 188 E 188
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 162 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 162 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 162 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 162 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 162 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>RGD|1309690 [details] [associations]
symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
Uniprot:D4ACE1
Length = 251
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 152 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
>UNIPROTKB|E2R6Q3 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
Ensembl:ENSCAFT00000021306 Uniprot:E2R6Q3
Length = 280
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKKR +T QQI ELE+ F + ++R ELS RL L +QVK WFQNRR + K +
Sbjct: 213 RKKR-KPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 271
Query: 136 ERHE 139
R +
Sbjct: 272 LREQ 275
>UNIPROTKB|Q8T940 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:39708
"Junonia coenia" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AY074760 ProteinModelPortal:Q8T940 SMR:Q8T940 Uniprot:Q8T940
Length = 253
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 73 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
N R++ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR ++K
Sbjct: 156 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 215
Query: 133 TQLE 136
+++
Sbjct: 216 KEIQ 219
>UNIPROTKB|G3V3J3 [details] [associations]
symbol:OTX2 "Homeobox protein OTX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AL161757 HGNC:HGNC:8522
ProteinModelPortal:G3V3J3 SMR:G3V3J3 Ensembl:ENST00000555804
ArrayExpress:G3V3J3 Bgee:G3V3J3 Uniprot:G3V3J3
Length = 163
Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 75 PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
PRK+R R T Q+ LE+LF + +PD R E++ ++ L +V+ WF+NRR + +
Sbjct: 35 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCR 94
Query: 133 TQLERHEN 140
Q ++ +N
Sbjct: 95 QQQQQQQN 102
>UNIPROTKB|E2RGY0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
Length = 254
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 151 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 207
>ZFIN|ZDB-GENE-030904-9 [details] [associations]
symbol:vax1 "ventral anterior homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0021554 "optic nerve development"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-9 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041 GO:GO:0000976
GO:GO:0061386 eggNOG:NOG323848 GeneTree:ENSGT00680000099870
GO:GO:0021554 CTD:11023 HOGENOM:HOG000049217 HOVERGEN:HBG007558
KO:K09318 EMBL:AY185348 EMBL:BC065951 IPI:IPI00512062
RefSeq:NP_919391.2 UniGene:Dr.134046 ProteinModelPortal:Q801E0
STRING:Q801E0 Ensembl:ENSDART00000031490 GeneID:373870
KEGG:dre:373870 InParanoid:Q801E0 OrthoDB:EOG4QVCD6
NextBio:20813407 Bgee:Q801E0 GO:GO:0090259 Uniprot:Q801E0
Length = 317
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 92 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 149
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 175
++ ++S LR + A +R + + T G P ++
Sbjct: 150 -DQGKDSELRSVVSETAATCSVLRLLEQGRLLTPPGLPGLL 189
>UNIPROTKB|P09016 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
Uniprot:P09016
Length = 255
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 154 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 210
>UNIPROTKB|I3LKE3 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 EMBL:CU570959 RefSeq:XP_003134888.1
Ensembl:ENSSSCT00000030592 GeneID:100519456 KEGG:ssc:100519456
Uniprot:I3LKE3
Length = 234
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 134 Q 134
+
Sbjct: 188 E 188
>UNIPROTKB|F1RWG2 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 KO:K09307 OMA:WMRSSGT
EMBL:CU856160 RefSeq:XP_003131597.1 UniGene:Ssc.22336
Ensembl:ENSSSCT00000019092 GeneID:100522513 KEGG:ssc:100522513
Uniprot:F1RWG2
Length = 217
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR MK +
Sbjct: 137 RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRR--MKWKK 194
Query: 136 ERHENSLLRQENDKLRAE 153
E DK AE
Sbjct: 195 ENKTAGPRATSQDKAEAE 212
>UNIPROTKB|F1RZG0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
Uniprot:F1RZG0
Length = 257
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 155 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 211
>UNIPROTKB|A7MBD6 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
Uniprot:A7MBD6
Length = 258
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 157 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 213
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
RKKR +T QI+ELE F + ++++RL+LS+ L L RQVK WFQNRR + K
Sbjct: 132 RKKRCP-YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 187
>UNIPROTKB|F1N4L6 [details] [associations]
symbol:ARGFX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:MQDTQWE
GeneTree:ENSGT00700000104273 EMBL:DAAA02001583 IPI:IPI00693997
Ensembl:ENSBTAT00000002930 Uniprot:F1N4L6
Length = 236
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
KK + R T Q +ELE+LF PD+ + EL+ +L L VK WF+NRR +MK Q
Sbjct: 10 KKSHERTSFTHTQYKELEALFSCNMFPDKNLQRELALKLNLPESTVKIWFRNRRFKMKKQ 69
Query: 135 LERHENSLLRQENDKLRAENM 155
E L+ + L A+++
Sbjct: 70 QREQEQQSLKPPSQVLPAKDV 90
>UNIPROTKB|E1C654 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI00682449
Ensembl:ENSGALT00000033072 Uniprot:E1C654
Length = 219
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 99 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 156
Query: 135 LERHENSLLR 144
++ ++S LR
Sbjct: 157 -DQGKDSELR 165
>UNIPROTKB|F1P5G0 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI01017344
Ensembl:ENSGALT00000015072 Uniprot:F1P5G0
Length = 220
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 99 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 156
Query: 135 LERHENSLLR 144
++ ++S LR
Sbjct: 157 -DQGKDSELR 165
>UNIPROTKB|E2R5U1 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
CTD:3204 KO:K09307 OMA:EHKDEGP EMBL:AAEX03009390 RefSeq:XP_864678.2
Ensembl:ENSCAFT00000004737 GeneID:482371 KEGG:cfa:482371
Uniprot:E2R5U1
Length = 239
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 134 Q 134
+
Sbjct: 188 E 188
>UNIPROTKB|F1NFE6 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
Length = 221
Score = 116 (45.9 bits), Expect = 0.00041, P = 0.00041
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 77 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCL-ETRQVKFWFQNRRTQMKT 133
K+R R T +Q+ ELE LF E +PD R ELS+RL L E R + WFQNRR + +
Sbjct: 50 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQQVWFQNRRAKCRK 109
Query: 134 QLER-HENSLL 143
Q + H+ +L
Sbjct: 110 QENQMHKGVIL 120
>UNIPROTKB|F1S4S0 [details] [associations]
symbol:LOC100739572 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099870 KO:K09318 OMA:ASEDCNK EMBL:CU468444
RefSeq:XP_001927274.1 UniGene:Ssc.95758 Ensembl:ENSSSCT00000011667
GeneID:100157019 KEGG:ssc:100157019 Uniprot:F1S4S0
Length = 333
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 100 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 157
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 175
++ ++S LR + A +R + + + G PA++
Sbjct: 158 -DQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALL 197
>UNIPROTKB|E2QUC0 [details] [associations]
symbol:VAX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0007420 GO:GO:0007406 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010
GO:GO:0060021 GO:GO:0000976 GO:GO:0031490
GeneTree:ENSGT00680000099870 CTD:11023 KO:K09318 OMA:ASEDCNK
EMBL:AAEX03015564 EMBL:AAEX03015565 RefSeq:XP_865035.1
Ensembl:ENSCAFT00000018920 GeneID:486906 KEGG:cfa:486906
NextBio:20860611 Uniprot:E2QUC0
Length = 334
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 100 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 157
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 175
++ ++S LR + A +R + + + G PA++
Sbjct: 158 -DQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALL 197
>UNIPROTKB|Q5SQQ9 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007406 "negative regulation of
neuroblast proliferation" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0043010
"camera-type eye development" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0007420 GO:GO:0007406 EMBL:CH471066
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0043010 GO:GO:0060021 GO:GO:0000976
GO:GO:0031490 eggNOG:NOG323848 EMBL:AL731557 CTD:11023
HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318 EMBL:AK127095
EMBL:BC101694 EMBL:BC101696 IPI:IPI00515064 IPI:IPI00749057
RefSeq:NP_001106175.1 RefSeq:NP_954582.1 UniGene:Hs.441536
ProteinModelPortal:Q5SQQ9 SMR:Q5SQQ9 STRING:Q5SQQ9
PhosphoSite:Q5SQQ9 DMDM:74743553 PRIDE:Q5SQQ9 DNASU:11023
Ensembl:ENST00000277905 Ensembl:ENST00000369206 GeneID:11023
KEGG:hsa:11023 UCSC:uc001ldb.1 UCSC:uc009xyx.3
GeneCards:GC10M118878 HGNC:HGNC:12660 HPA:HPA028946 MIM:604294
MIM:614402 neXtProt:NX_Q5SQQ9 PharmGKB:PA37283 InParanoid:Q5SQQ9
OMA:ASEDCNK GenomeRNAi:11023 NextBio:41888 Bgee:Q5SQQ9
CleanEx:HS_VAX1 Genevestigator:Q5SQQ9 Uniprot:Q5SQQ9
Length = 334
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 100 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 157
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 175
++ ++S LR + A +R + + + G PA++
Sbjct: 158 -DQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALL 197
>UNIPROTKB|F1SHT4 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656 EMBL:CU570959
Ensembl:ENSSSCT00000018182 Uniprot:F1SHT4
Length = 241
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 74 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
P RK+ +T Q ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 128 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 187
Query: 134 Q 134
+
Sbjct: 188 E 188
>RGD|621132 [details] [associations]
symbol:Vax1 "ventral anterior homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007406 "negative regulation of neuroblast
proliferation" evidence=IEA;ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007417 "central nervous system development"
evidence=ISO] [GO:0007420 "brain development" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0031490
"chromatin DNA binding" evidence=IEA;ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=ISO] [GO:0043010 "camera-type
eye development" evidence=IEA;ISO] [GO:0060021 "palate development"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621132
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK OrthoDB:EOG4H9XN9
EMBL:AF113515 IPI:IPI00203938 RefSeq:NP_072158.1 UniGene:Rn.48764
ProteinModelPortal:Q9JM00 Ensembl:ENSRNOT00000011743 GeneID:64571
KEGG:rno:64571 InParanoid:Q9JM00 NextBio:613524 ArrayExpress:Q9JM00
Genevestigator:Q9JM00 GermOnline:ENSRNOG00000008824 Uniprot:Q9JM00
Length = 336
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 100 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 157
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 175
++ ++S LR + A +R + + + G PA++
Sbjct: 158 -DQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALL 197
>UNIPROTKB|Q9JM00 [details] [associations]
symbol:Vax1 "Ventral anterior homeobox 1" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621132
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK OrthoDB:EOG4H9XN9
EMBL:AF113515 IPI:IPI00203938 RefSeq:NP_072158.1 UniGene:Rn.48764
ProteinModelPortal:Q9JM00 Ensembl:ENSRNOT00000011743 GeneID:64571
KEGG:rno:64571 InParanoid:Q9JM00 NextBio:613524 ArrayExpress:Q9JM00
Genevestigator:Q9JM00 GermOnline:ENSRNOG00000008824 Uniprot:Q9JM00
Length = 336
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 100 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 157
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 175
++ ++S LR + A +R + + + G PA++
Sbjct: 158 -DQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALL 197
>MGI|MGI:1277163 [details] [associations]
symbol:Vax1 "ventral anterior homeobox containing gene 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007406
"negative regulation of neuroblast proliferation" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0007417 "central
nervous system development" evidence=IMP] [GO:0007420 "brain
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060021 "palate
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:1277163
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0035914 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK EMBL:AF064554
EMBL:AB020495 EMBL:BC111818 IPI:IPI00135400 IPI:IPI00762603
RefSeq:NP_033527.1 UniGene:Mm.23801 ProteinModelPortal:Q2NKI2
SMR:Q2NKI2 STRING:Q2NKI2 PhosphoSite:Q2NKI2 PRIDE:Q2NKI2
Ensembl:ENSMUST00000172821 GeneID:22326 KEGG:mmu:22326
UCSC:uc008ibg.1 InParanoid:Q2NKI2 OrthoDB:EOG4H9XN9 NextBio:302557
Bgee:Q2NKI2 CleanEx:MM_VAX1 Genevestigator:Q2NKI2 Uniprot:Q2NKI2
Length = 338
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 100 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 157
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 175
++ ++S LR + A +R + + + G PA++
Sbjct: 158 -DQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALL 197
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 99 (39.9 bits), Expect = 0.00043, P = 0.00043
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
RKKR +T Q ELE F + +R E+++ L L RQVK WFQNRR +MK
Sbjct: 2 RKKRCP-YTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 99 (39.9 bits), Expect = 0.00043, P = 0.00043
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P+K+ +Q++ELE++F + + K+R +L+ RL L QV+ WFQNRR + + Q
Sbjct: 28 PQKRVRTIFNLKQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWFQNRRVKYQKQ 87
>UNIPROTKB|E2QUC2 [details] [associations]
symbol:HOXC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
KO:K09296 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 CTD:3227 OMA:EEHTNSG EMBL:AAEX03014974
RefSeq:XP_003433544.2 Ensembl:ENSCAFT00000010701 GeneID:100688428
KEGG:cfa:100688428 Uniprot:E2QUC2
Length = 305
Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 46 EDLLEHESRSGSDNMXXXXXXXXXXXXNPPR-KKRYHRHTPQQIQELESLFKECPHPDEK 104
E+ + S SGS + N PR +K+ ++ QI+ELE F + +++
Sbjct: 202 EEESTNPSSSGSAHSAAAKEPAKGAAPNAPRTRKKRCPYSKFQIRELEREFFFNVYINKE 261
Query: 105 QRLELSKRLCLETRQVKFWFQNRRTQMKTQLER 137
+RL+LS+ L L RQVK WFQNRR + K +L R
Sbjct: 262 KRLQLSRMLNLTDRQVKIWFQNRRMKEK-KLSR 293
>UNIPROTKB|F1PF43 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 OMA:LGEADHC
EMBL:AAEX03007653 EMBL:AAEX03007652 Ensembl:ENSCAFT00000005524
Uniprot:F1PF43
Length = 247
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 59 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 117
Query: 135 LER 137
R
Sbjct: 118 QSR 120
>ZFIN|ZDB-GENE-000830-1 [details] [associations]
symbol:nkx2.1a "NK2 homeobox 1a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000830-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HSSP:P23441 GO:GO:0030878 HOVERGEN:HBG006689 EMBL:AF253054
IPI:IPI00489984 RefSeq:NP_571664.1 UniGene:Dr.82318
ProteinModelPortal:Q9I8L7 SMR:Q9I8L7 STRING:Q9I8L7 GeneID:58112
KEGG:dre:58112 CTD:58112 InParanoid:Q9I8L7 NextBio:20892364
ArrayExpress:Q9I8L7 Uniprot:Q9I8L7
Length = 307
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
PR+KR + Q+ ELE FK+ + +R L+ + L QVK WFQN R +MK Q
Sbjct: 146 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 205
Query: 135 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 189
+ + + +Q++ + A+ R A+ P+ G P G + H ++++
Sbjct: 206 AK--DKASQQQDSGNMCAQQSPRRVAL--PVLVKDGKPCQNGSGTPTPIHQQVQS 256
>UNIPROTKB|E2QT52 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
Length = 274
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
P++ R +T QQ+ ELE F + ++R+E++ LCL RQ+K WFQNRR + K
Sbjct: 169 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 225
>UNIPROTKB|F1P452 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0014707 "branchiomeric
skeletal muscle development" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0005730 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:AADN02028369 IPI:IPI00820270
Ensembl:ENSGALT00000010289 Uniprot:F1P452
Length = 311
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 42 RRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELESLFKECPHP 101
+R +E+L + E G N R++R H T QQ+QELE+ F+ +P
Sbjct: 57 KRGKENLTKREG--GGGNAAADGAADDPAKKKKQRRQRTH-FTSQQLQELEATFQRNRYP 113
Query: 102 DEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 139
D R E++ L +V+ WF+NRR + + + ER++
Sbjct: 114 DMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKR-ERNQ 150
>MGI|MGI:96172 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IDA] [GO:0007501 "mesodermal cell fate specification"
evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0032993 "protein-DNA
complex" evidence=IDA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96172 GO:GO:0005737
GO:GO:0045893 GO:GO:0005730 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0060272 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:U20371 EMBL:U20370 EMBL:AK133481
EMBL:BC119302 IPI:IPI00133248 PIR:G37290 RefSeq:NP_034580.1
UniGene:Mm.26954 ProteinModelPortal:P31311 SMR:P31311 IntAct:P31311
MINT:MINT-1172550 STRING:P31311 PhosphoSite:P31311 PRIDE:P31311
Ensembl:ENSMUST00000048026 GeneID:15396 KEGG:mmu:15396
UCSC:uc009byn.1 GeneTree:ENSGT00700000104263 InParanoid:P31311
NextBio:288080 Bgee:P31311 CleanEx:MM_HOXA11 Genevestigator:P31311
GermOnline:ENSMUSG00000038210 Uniprot:P31311
Length = 313
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 42/113 (37%), Positives = 53/113 (46%)
Query: 20 DNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKR 79
D GGG Q + E E RR E ES SG RKKR
Sbjct: 195 DGGGGGGCQ-EAAAEEKER---RRRPESSSSPESSSGHTE-----DKAGGSGGQRTRKKR 245
Query: 80 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
+T QI+ELE F + ++++RL+LS+ L L RQVK WFQNRR + K
Sbjct: 246 CP-YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 297
>RGD|1564605 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001656
"metanephros development" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001759
"organ induction" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0007501 "mesodermal cell fate
specification" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0010720 "positive regulation
of cell development" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048589 "developmental growth"
evidence=ISO] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=ISO] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1564605 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295 CTD:3207 KO:K09296
OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CH474011 EMBL:AC122669
RefSeq:NP_001123350.1 RefSeq:XP_003749800.1 RefSeq:XP_003752232.1
RefSeq:XP_003753947.1 UniGene:Rn.224575 Ensembl:ENSRNOT00000010256
GeneID:100909443 GeneID:100911743 GeneID:368057 KEGG:rno:100909443
KEGG:rno:100911743 KEGG:rno:368057 NextBio:691993 Uniprot:G3V6Z0
Length = 313
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 42/113 (37%), Positives = 53/113 (46%)
Query: 20 DNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMXXXXXXXXXXXXNPPRKKR 79
D GGG Q + E E RR E ES SG RKKR
Sbjct: 195 DGGGGGGCQ-EAAAEEKER---RRRPESSSSPESSSGHTE-----DKAGGSGGQRTRKKR 245
Query: 80 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
+T QI+ELE F + ++++RL+LS+ L L RQVK WFQNRR + K
Sbjct: 246 CP-YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 297
>ZFIN|ZDB-GENE-000328-2 [details] [associations]
symbol:hoxb10a "homeo box B10a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000328-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG248153
HOGENOM:HOG000231182 HOVERGEN:HBG052934 EMBL:BC155298 EMBL:BC163689
EMBL:AF071250 EMBL:Y14531 IPI:IPI00512100 UniGene:Dr.75788
STRING:Q9PWL7 InParanoid:Q9PWL7 ArrayExpress:Q9PWL7 Uniprot:Q9PWL7
Length = 279
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 76 RKKR--YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 133
RKKR Y +H QI ELE F + ++RLE+S+ + L RQVK WFQNRR ++K
Sbjct: 207 RKKRCPYSKH---QILELEKEFLFNMYLTRERRLEISRSINLTDRQVKIWFQNRRMKLKK 263
Query: 134 QLERH 138
H
Sbjct: 264 MTREH 268
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKK R + +Q LE FKE + KQ++ L+K+L L TRQV+ WFQNRR + K +
Sbjct: 161 RKKL--RLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQ 218
Query: 136 ERHENSLLRQENDKLRAENMSIR 158
+ L++ + L EN ++
Sbjct: 219 TEVDCEYLKRCCENLTDENRRLQ 241
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKK R + Q LE FKE + KQ+L L+K+L L RQV+ WFQNRR + K +
Sbjct: 162 RKKL--RLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQ 219
Query: 136 ERHENSLLRQENDKLRAENMSIR 158
+ L++ D L EN ++
Sbjct: 220 TEVDCEYLKRCCDNLTEENRRLQ 242
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 118 (46.6 bits), Expect = 0.00048, P = 0.00048
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 76 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 135
RKK R + Q LE FKE + KQ+L L+K+L L RQV+ WFQNRR + K +
Sbjct: 134 RKKL--RLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQ 191
Query: 136 ERHENSLLRQENDKLRAEN 154
+ L++ +KL EN
Sbjct: 192 TEVDCEYLKRCVEKLTEEN 210
>UNIPROTKB|H0YAD2 [details] [associations]
symbol:PHOX2B "Paired mesoderm homeobox protein 2B"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC105389 HGNC:HGNC:9143
Ensembl:ENST00000510424 Uniprot:H0YAD2
Length = 180
Score = 112 (44.5 bits), Expect = 0.00049, P = 0.00049
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 73 NPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 130
N RK+R R T Q++ELE +F E +PD R EL+ ++ L +V+ WFQNRR +
Sbjct: 33 NEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 92
Query: 131 MKTQLER 137
+ Q ER
Sbjct: 93 FRKQ-ER 98
>UNIPROTKB|Q9UIW0 [details] [associations]
symbol:VAX2 "Ventral anterior homeobox 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
Length = 290
Score = 117 (46.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 75 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 134
P++ R T +Q+ LE F+ C + ++R EL+++L L QVK WFQNRRT+ K
Sbjct: 102 PKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 160
Query: 135 LER 137
R
Sbjct: 161 QSR 163
Score = 43 (20.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 20 DNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSD 58
D G GDL+ G S + G + ES + SD
Sbjct: 27 DRSGAGDLRADGGGHSPTEVAGTSASSPAGSRESGADSD 65
>WB|WBGene00000452 [details] [associations]
symbol:ceh-31 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG263484 EMBL:FO080757
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 PIR:T25611
RefSeq:NP_508525.3 ProteinModelPortal:Q22910 SMR:Q22910
PaxDb:Q22910 EnsemblMetazoa:C33D12.1 GeneID:191621
KEGG:cel:CELE_C33D12.1 UCSC:C33D12.1 CTD:191621 WormBase:C33D12.1
InParanoid:Q22910 OMA:MELAHRM NextBio:949710 Uniprot:Q22910
Length = 260
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 54 RSGSDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL 113
R GS N + +K T +Q+QELE+ F++ + + R+EL+ R+
Sbjct: 72 RIGSPNTERSVNESPTCVGSKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRM 131
Query: 114 CLETRQVKFWFQNRRTQMKTQ 134
L QVK W+QNRRT+ K Q
Sbjct: 132 GLTDTQVKTWYQNRRTKWKRQ 152
>UNIPROTKB|F1RLA3 [details] [associations]
symbol:CRX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043522 "leucine
zipper domain binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
GeneTree:ENSGT00700000104128 KO:K09337 OMA:QTKARPA
UniGene:Ssc.17775 EMBL:FP102640 RefSeq:XP_003127313.1
Ensembl:ENSSSCT00000003465 GeneID:100520079 KEGG:ssc:100520079
Uniprot:F1RLA3
Length = 299
Score = 118 (46.6 bits), Expect = 0.00055, P = 0.00055
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 75 PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
PRK+R R T Q++ELESLF + +PD R E++ ++ L +V+ WF+NRR + +
Sbjct: 36 PRKQRRERTTFTRSQLEELESLFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCR 95
Query: 133 TQLERHE 139
Q ++ +
Sbjct: 96 QQRQQQK 102
>UNIPROTKB|Q9YH71 [details] [associations]
symbol:vent1B "Homeobox protein vent1B" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001707
"mesoderm formation" evidence=ISS] [GO:0030509 "BMP signaling
pathway" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048264 "determination of ventral
identity" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030509 GO:GO:0001707
GO:GO:0048264 HSSP:P06602 HOVERGEN:HBG082072 EMBL:AJ131094
RefSeq:NP_001165683.1 UniGene:Xl.85555 ProteinModelPortal:Q9YH71
GeneID:100337611 KEGG:xla:100337611 CTD:100337611
Xenbase:XB-GENE-6464310 Uniprot:Q9YH71
Length = 270
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 84 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 143
+PQQI +LE F + + +R +L+ L L QVK WFQNRR ++K Q++ ++SL+
Sbjct: 136 SPQQISKLEQAFNKQRYLGASERKKLATSLMLSEIQVKTWFQNRRMKLKRQIQDQQHSLV 195
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 38 GIIGRRSREDLLEHESRSGS----DNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELES 93
G GR++ E E RSGS D+ + PRK+R T +QI+ELE+
Sbjct: 146 GDYGRQALSPA-EAEKRSGSKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEA 203
Query: 94 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
F + +R E++ L L RQVK WFQNRR + K
Sbjct: 204 EFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 38 GIIGRRSREDLLEHESRSG----SDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELES 93
G GR++ E E RSG SD+ + PRK+R T +QI+ELE+
Sbjct: 146 GDYGRQALSPA-EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEA 203
Query: 94 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
F + +R E++ L L RQVK WFQNRR + K
Sbjct: 204 EFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 38 GIIGRRSREDLLEHESRSG----SDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELES 93
G GR++ E E RSG SD+ + PRK+R T +QI+ELE+
Sbjct: 146 GDYGRQALSPA-EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEA 203
Query: 94 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
F + +R E++ L L RQVK WFQNRR + K
Sbjct: 204 EFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 38 GIIGRRSREDLLEHESRSG----SDNMXXXXXXXXXXXXNPPRKKRYHRHTPQQIQELES 93
G GR++ E E RSG SD+ + PRK+R T +QI+ELE+
Sbjct: 147 GDYGRQALSPA-EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEA 204
Query: 94 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 132
F + +R E++ L L RQVK WFQNRR + K
Sbjct: 205 EFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 243
WARNING: HSPs involving 52 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 778 733 0.00087 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 302
No. of states in DFA: 625 (66 KB)
Total size of DFA: 390 KB (2190 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.21u 0.20s 61.41t Elapsed: 00:00:03
Total cpu time: 61.23u 0.20s 61.43t Elapsed: 00:00:03
Start: Tue May 21 17:55:57 2013 End: Tue May 21 17:56:00 2013
WARNINGS ISSUED: 2