Query 004027
Match_columns 778
No_of_seqs 394 out of 1899
Neff 5.5
Searched_HMMs 46136
Date Thu Mar 28 16:16:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004027.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004027hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 4E-102 9E-107 903.4 32.0 635 10-776 20-670 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 5E-62 1.1E-66 447.7 9.8 117 19-136 2-118 (118)
3 cd01175 IPT_COE IPT domain of 99.6 1.2E-14 2.5E-19 126.7 8.7 80 509-595 2-83 (85)
4 KOG4412 26S proteasome regulat 99.5 3.8E-15 8.2E-20 147.4 5.6 92 679-771 106-197 (226)
5 PF12796 Ank_2: Ankyrin repeat 99.4 1.9E-12 4.1E-17 113.6 10.5 85 683-772 1-85 (89)
6 KOG4412 26S proteasome regulat 99.3 1.3E-12 2.9E-17 129.5 6.9 98 676-773 69-166 (226)
7 PF13637 Ank_4: Ankyrin repeat 99.3 9.6E-12 2.1E-16 100.5 6.6 54 713-766 1-54 (54)
8 PHA02743 Viral ankyrin protein 99.2 3.6E-11 7.7E-16 118.9 10.4 95 679-773 57-155 (166)
9 PF13857 Ank_5: Ankyrin repeat 99.2 8.1E-12 1.8E-16 102.2 4.7 55 699-753 1-56 (56)
10 KOG0509 Ankyrin repeat and DHH 99.2 2.5E-11 5.3E-16 138.6 8.8 89 681-770 80-169 (600)
11 KOG0512 Fetal globin-inducing 99.2 3.7E-11 8E-16 118.6 7.8 92 682-773 66-157 (228)
12 PHA02875 ankyrin repeat protei 99.2 8.7E-11 1.9E-15 130.8 11.4 91 680-771 103-193 (413)
13 PHA02795 ankyrin-like protein; 99.2 6.7E-11 1.5E-15 133.3 10.5 94 681-775 190-291 (437)
14 PHA02736 Viral ankyrin protein 99.2 5.3E-11 1.1E-15 115.3 8.3 93 680-772 56-152 (154)
15 PHA02791 ankyrin-like protein; 99.2 9.2E-11 2E-15 126.2 10.5 87 681-768 63-150 (284)
16 PF01833 TIG: IPT/TIG domain; 99.2 1.3E-10 2.9E-15 100.7 8.7 84 508-595 1-85 (85)
17 KOG0509 Ankyrin repeat and DHH 99.1 6E-11 1.3E-15 135.5 8.3 106 661-767 94-199 (600)
18 PHA02741 hypothetical protein; 99.1 1.7E-10 3.7E-15 114.0 9.7 92 678-769 59-155 (169)
19 PHA02791 ankyrin-like protein; 99.1 2E-10 4.4E-15 123.5 10.8 92 678-772 29-120 (284)
20 PLN03192 Voltage-dependent pot 99.1 2.3E-10 5E-15 139.2 12.4 90 680-770 526-615 (823)
21 PHA02743 Viral ankyrin protein 99.1 2.2E-10 4.7E-15 113.3 9.2 87 681-767 22-115 (166)
22 PHA02884 ankyrin repeat protei 99.1 3.4E-10 7.5E-15 122.5 11.4 88 682-770 36-128 (300)
23 KOG0705 GTPase-activating prot 99.1 4.9E-10 1.1E-14 126.1 12.4 99 676-776 622-724 (749)
24 PHA03095 ankyrin-like protein; 99.1 6.3E-10 1.4E-14 125.4 13.1 96 677-772 220-316 (471)
25 PHA02741 hypothetical protein; 99.1 5.4E-10 1.2E-14 110.5 10.6 89 680-768 22-120 (169)
26 KOG0195 Integrin-linked kinase 99.1 1.6E-10 3.5E-15 121.4 7.0 91 682-773 37-127 (448)
27 PHA02946 ankyin-like protein; 99.1 1.1E-09 2.4E-14 124.6 14.3 90 682-771 40-132 (446)
28 KOG4214 Myotrophin and similar 99.1 2.7E-10 5.8E-15 102.5 6.7 89 683-773 6-94 (117)
29 cd01179 IPT_plexin_repeat2 Sec 99.1 8.2E-10 1.8E-14 98.0 9.7 84 508-597 1-85 (85)
30 PHA02878 ankyrin repeat protei 99.1 5.7E-10 1.2E-14 127.2 11.0 94 679-773 168-262 (477)
31 KOG0515 p53-interacting protei 99.1 3.3E-10 7.1E-15 126.4 8.5 87 682-770 554-640 (752)
32 PHA02874 ankyrin repeat protei 99.1 6.7E-10 1.5E-14 125.0 11.3 93 678-771 123-215 (434)
33 KOG4177 Ankyrin [Cell wall/mem 99.0 4.8E-10 1E-14 136.9 10.1 95 679-774 507-601 (1143)
34 PHA02859 ankyrin repeat protei 99.0 9.2E-10 2E-14 112.9 10.5 91 679-770 87-183 (209)
35 KOG0508 Ankyrin repeat protein 99.0 2.4E-10 5.3E-15 126.4 6.3 91 679-770 117-207 (615)
36 PHA02859 ankyrin repeat protei 99.0 1.6E-09 3.6E-14 111.0 11.0 92 679-771 51-150 (209)
37 PTZ00322 6-phosphofructo-2-kin 99.0 1.2E-09 2.6E-14 130.1 10.8 86 682-768 85-170 (664)
38 PHA03100 ankyrin repeat protei 99.0 1.7E-09 3.8E-14 122.4 11.2 92 680-772 216-309 (480)
39 PHA03095 ankyrin-like protein; 99.0 2.2E-09 4.8E-14 121.1 11.1 92 679-771 47-144 (471)
40 PHA02875 ankyrin repeat protei 99.0 2.5E-09 5.5E-14 119.1 11.2 95 678-773 134-229 (413)
41 PHA03100 ankyrin repeat protei 99.0 2E-09 4.3E-14 121.9 10.3 95 678-773 105-203 (480)
42 cd00102 IPT Immunoglobulin-lik 99.0 3E-09 6.6E-14 93.3 9.2 83 509-596 2-88 (89)
43 PLN03192 Voltage-dependent pot 99.0 2.7E-09 5.8E-14 129.9 12.0 97 676-773 555-682 (823)
44 PHA02798 ankyrin-like protein; 98.9 3.1E-09 6.7E-14 121.8 10.8 94 678-771 70-173 (489)
45 PHA02989 ankyrin repeat protei 98.9 4.7E-09 1E-13 120.5 10.9 74 699-772 242-315 (494)
46 PHA02730 ankyrin-like protein; 98.9 3.6E-09 7.9E-14 124.6 9.6 88 679-767 41-137 (672)
47 PHA02878 ankyrin repeat protei 98.9 4.1E-09 8.9E-14 120.2 9.6 79 695-773 149-228 (477)
48 KOG0514 Ankyrin repeat protein 98.9 2.4E-09 5.2E-14 115.8 6.9 95 675-770 336-431 (452)
49 PHA02884 ankyrin repeat protei 98.9 5.9E-09 1.3E-13 113.0 9.9 87 678-765 69-156 (300)
50 KOG0514 Ankyrin repeat protein 98.9 9.2E-09 2E-13 111.3 11.1 70 698-768 325-395 (452)
51 KOG0512 Fetal globin-inducing 98.9 4.2E-09 9E-14 104.3 7.6 106 660-766 78-184 (228)
52 PHA02946 ankyin-like protein; 98.8 1.3E-08 2.8E-13 116.0 11.0 93 677-771 70-165 (446)
53 PHA02736 Viral ankyrin protein 98.8 4.4E-09 9.6E-14 101.9 5.8 89 679-768 17-114 (154)
54 COG0666 Arp FOG: Ankyrin repea 98.8 2.1E-08 4.6E-13 98.5 10.6 89 682-771 76-172 (235)
55 PHA02876 ankyrin repeat protei 98.8 1.8E-08 3.9E-13 120.0 11.4 89 681-770 147-235 (682)
56 PHA02876 ankyrin repeat protei 98.8 1.7E-08 3.6E-13 120.3 10.8 92 679-771 375-468 (682)
57 PHA02798 ankyrin-like protein; 98.8 1.7E-08 3.6E-13 115.8 10.3 74 699-772 244-317 (489)
58 KOG4177 Ankyrin [Cell wall/mem 98.8 9E-09 2E-13 126.0 8.2 92 679-771 540-631 (1143)
59 PHA02874 ankyrin repeat protei 98.8 2.6E-08 5.5E-13 112.3 11.3 90 682-771 4-93 (434)
60 PHA02716 CPXV016; CPX019; EVM0 98.8 1.5E-08 3.4E-13 121.2 9.9 90 678-768 176-272 (764)
61 KOG0508 Ankyrin repeat protein 98.8 6.6E-09 1.4E-13 115.3 6.1 91 682-773 87-177 (615)
62 KOG0510 Ankyrin repeat protein 98.8 1.1E-08 2.4E-13 119.6 7.9 96 677-772 304-403 (929)
63 PHA02989 ankyrin repeat protei 98.8 2.4E-08 5.2E-13 114.6 10.4 75 696-770 91-171 (494)
64 PHA02716 CPXV016; CPX019; EVM0 98.8 3.4E-08 7.4E-13 118.4 11.8 87 685-772 290-392 (764)
65 KOG0510 Ankyrin repeat protein 98.7 2E-08 4.4E-13 117.3 9.1 92 678-770 272-365 (929)
66 KOG0502 Integral membrane anky 98.7 6.3E-09 1.4E-13 106.3 4.3 91 681-772 162-252 (296)
67 PHA02917 ankyrin-like protein; 98.7 3.1E-08 6.8E-13 117.9 10.7 79 695-773 434-513 (661)
68 cd00204 ANK ankyrin repeats; 98.7 1.2E-07 2.7E-12 84.9 10.5 89 680-769 8-96 (126)
69 cd00603 IPT_PCSR IPT domain of 98.7 9.1E-08 2E-12 85.0 9.2 85 508-596 1-89 (90)
70 KOG0505 Myosin phosphatase, re 98.7 3E-08 6.5E-13 111.8 6.6 89 682-771 43-131 (527)
71 PHA02795 ankyrin-like protein; 98.7 7.1E-08 1.5E-12 109.1 9.5 93 680-773 150-248 (437)
72 PHA02917 ankyrin-like protein; 98.6 7.7E-08 1.7E-12 114.6 9.9 89 678-767 135-252 (661)
73 cd01180 IPT_plexin_repeat1 Fir 98.6 1.3E-07 2.7E-12 85.8 8.3 87 509-597 2-94 (94)
74 PHA02730 ankyrin-like protein; 98.6 7.6E-08 1.6E-12 113.7 8.7 79 695-773 444-525 (672)
75 KOG0505 Myosin phosphatase, re 98.6 1.1E-07 2.4E-12 107.4 9.3 70 702-771 187-256 (527)
76 COG0666 Arp FOG: Ankyrin repea 98.6 1.1E-07 2.3E-12 93.5 8.1 92 676-768 103-202 (235)
77 KOG1710 MYND Zn-finger and ank 98.6 1.1E-07 2.3E-12 100.6 8.0 115 655-771 22-137 (396)
78 smart00429 IPT ig-like, plexin 98.6 1.9E-07 4.2E-12 82.8 8.5 83 508-595 2-89 (90)
79 KOG0195 Integrin-linked kinase 98.6 7.3E-08 1.6E-12 101.7 6.1 72 702-773 23-94 (448)
80 PHA02792 ankyrin-like protein; 98.5 1.8E-07 4E-12 109.6 9.1 77 696-772 393-479 (631)
81 PHA02792 ankyrin-like protein; 98.5 2.2E-07 4.8E-12 108.9 9.7 90 683-773 343-437 (631)
82 PF12796 Ank_2: Ankyrin repeat 98.5 2.8E-07 6.1E-12 80.7 6.3 64 679-743 26-89 (89)
83 KOG1710 MYND Zn-finger and ank 98.5 5.4E-07 1.2E-11 95.4 9.2 92 678-771 12-104 (396)
84 KOG0818 GTPase-activating prot 98.4 6.9E-07 1.5E-11 99.8 9.9 93 676-769 130-223 (669)
85 cd00204 ANK ankyrin repeats; 98.4 1.6E-06 3.4E-11 77.7 10.4 87 679-766 40-126 (126)
86 TIGR00870 trp transient-recept 98.4 9.7E-07 2.1E-11 106.4 10.9 95 677-771 80-200 (743)
87 KOG0507 CASK-interacting adapt 98.4 2E-07 4.3E-12 108.6 4.2 84 683-767 86-169 (854)
88 TIGR00870 trp transient-recept 98.4 5.3E-07 1.1E-11 108.7 7.8 92 679-771 128-242 (743)
89 KOG0506 Glutaminase (contains 98.4 3.3E-07 7.2E-12 102.0 5.0 89 682-771 509-598 (622)
90 cd01181 IPT_plexin_repeat3 Thi 98.3 2E-06 4.2E-11 79.0 8.0 74 508-584 1-82 (99)
91 cd02849 CGTase_C_term Cgtase ( 98.3 4.1E-06 8.9E-11 74.3 9.1 79 508-595 3-81 (81)
92 KOG0502 Integral membrane anky 98.3 8.6E-07 1.9E-11 91.0 5.0 92 677-770 191-282 (296)
93 KOG0522 Ankyrin repeat protein 98.2 2.4E-06 5.1E-11 96.7 8.1 68 702-769 44-111 (560)
94 PF13857 Ank_5: Ankyrin repeat 98.2 1E-06 2.2E-11 72.1 3.0 39 732-770 1-40 (56)
95 PF00023 Ank: Ankyrin repeat H 98.1 3.1E-06 6.8E-11 61.8 4.4 33 712-744 1-33 (33)
96 PF13637 Ank_4: Ankyrin repeat 98.1 4.6E-06 1E-10 67.2 5.5 52 681-733 3-54 (54)
97 PF13606 Ank_3: Ankyrin repeat 98.1 4.5E-06 9.8E-11 60.3 3.8 29 712-740 1-29 (30)
98 KOG0507 CASK-interacting adapt 98.0 3.9E-06 8.4E-11 98.2 5.2 89 681-770 51-139 (854)
99 KOG0783 Uncharacterized conser 98.0 1.7E-06 3.7E-11 101.3 2.0 64 706-769 45-109 (1267)
100 cd00604 IPT_CGTD IPT domain (d 98.0 3E-05 6.5E-10 68.8 8.8 79 509-596 2-80 (81)
101 KOG3676 Ca2+-permeable cation 98.0 1.5E-05 3.3E-10 94.2 7.7 93 678-771 183-298 (782)
102 PF13606 Ank_3: Ankyrin repeat 97.9 9.7E-06 2.1E-10 58.5 3.6 29 745-773 1-29 (30)
103 KOG0515 p53-interacting protei 97.8 7.6E-05 1.6E-09 84.5 8.7 86 679-765 583-671 (752)
104 KOG3676 Ca2+-permeable cation 97.7 5E-05 1.1E-09 89.9 7.4 88 680-768 241-330 (782)
105 KOG4369 RTK signaling protein 97.7 1.4E-05 3.1E-10 95.9 1.5 92 679-771 757-849 (2131)
106 KOG4214 Myotrophin and similar 97.6 0.00017 3.6E-09 65.7 7.0 82 680-766 35-116 (117)
107 PF00023 Ank: Ankyrin repeat H 97.6 7E-05 1.5E-09 54.7 3.6 28 745-772 1-28 (33)
108 KOG2384 Major histocompatibili 97.5 0.00015 3.3E-09 73.4 6.4 71 703-773 2-73 (223)
109 PTZ00322 6-phosphofructo-2-kin 97.5 0.00022 4.7E-09 85.6 8.8 78 677-755 113-197 (664)
110 KOG4369 RTK signaling protein 97.4 6E-05 1.3E-09 90.9 2.6 95 678-773 823-919 (2131)
111 KOG0511 Ankyrin repeat protein 97.4 0.00022 4.7E-09 78.4 5.9 56 714-769 37-92 (516)
112 KOG0782 Predicted diacylglycer 97.1 0.00084 1.8E-08 76.6 6.6 90 679-769 899-990 (1004)
113 KOG0782 Predicted diacylglycer 97.0 0.0013 2.9E-08 75.0 6.7 88 680-769 868-957 (1004)
114 KOG0783 Uncharacterized conser 96.9 0.00074 1.6E-08 80.0 4.0 80 676-756 49-129 (1267)
115 KOG0521 Putative GTPase activa 96.7 0.0014 3.1E-08 79.6 4.8 87 680-767 657-743 (785)
116 KOG0506 Glutaminase (contains 96.2 0.0026 5.6E-08 71.8 2.8 62 709-770 502-563 (622)
117 cd00602 IPT_TF IPT domain of e 96.2 0.016 3.5E-07 53.7 7.5 82 509-596 2-100 (101)
118 KOG3610 Plexins (functional se 96.0 0.018 3.9E-07 71.4 8.3 92 504-600 139-233 (1025)
119 KOG0520 Uncharacterized conser 95.9 0.0031 6.7E-08 77.0 1.7 80 687-766 615-700 (975)
120 KOG2505 Ankyrin repeat protein 95.5 0.028 6.1E-07 64.2 6.7 81 686-769 397-483 (591)
121 cd01176 IPT_RBP-Jkappa IPT dom 95.4 0.057 1.2E-06 48.8 7.1 66 524-596 20-96 (97)
122 cd01178 IPT_NFAT IPT domain of 95.3 0.057 1.2E-06 50.0 7.0 82 507-596 1-100 (101)
123 KOG0521 Putative GTPase activa 95.3 0.011 2.4E-07 72.1 2.9 62 711-772 654-715 (785)
124 KOG0511 Ankyrin repeat protein 94.9 0.08 1.7E-06 58.9 7.8 75 682-758 39-113 (516)
125 smart00248 ANK ankyrin repeats 94.7 0.051 1.1E-06 35.3 3.8 23 746-768 2-24 (30)
126 smart00248 ANK ankyrin repeats 94.5 0.056 1.2E-06 35.1 3.7 29 712-740 1-29 (30)
127 KOG0818 GTPase-activating prot 94.4 0.061 1.3E-06 61.4 5.7 65 708-772 122-193 (669)
128 KOG3609 Receptor-activated Ca2 94.3 0.046 1E-06 65.9 4.8 88 676-771 59-156 (822)
129 cd01177 IPT_NFkappaB IPT domai 93.1 0.22 4.7E-06 46.3 5.9 82 509-596 2-101 (102)
130 KOG0522 Ankyrin repeat protein 92.8 0.11 2.3E-06 60.1 4.1 57 715-771 22-80 (560)
131 KOG0705 GTPase-activating prot 92.6 0.38 8.2E-06 56.1 8.3 63 677-740 659-721 (749)
132 PF08549 SWI-SNF_Ssr4: Fungal 91.9 0.34 7.3E-06 57.7 7.0 103 27-137 30-155 (669)
133 KOG2505 Ankyrin repeat protein 68.4 7.5 0.00016 45.2 5.2 47 726-772 404-456 (591)
134 KOG3836 HLH transcription fact 64.3 5 0.00011 47.6 2.9 51 698-748 414-464 (605)
135 KOG3609 Receptor-activated Ca2 63.7 18 0.0004 44.5 7.4 31 711-741 129-159 (822)
136 KOG3610 Plexins (functional se 61.0 8.3 0.00018 48.8 4.1 76 504-580 46-125 (1025)
137 PF03158 DUF249: Multigene fam 57.5 16 0.00034 37.7 4.7 46 716-767 146-191 (192)
138 PF14545 DBB: Dof, BCAP, and B 45.3 46 0.00099 33.1 5.6 70 513-587 3-80 (142)
139 KOG2384 Major histocompatibili 44.1 59 0.0013 34.0 6.3 67 676-743 9-76 (223)
140 KOG3743 Recombination signal b 43.0 28 0.00062 40.9 4.3 71 522-599 506-587 (622)
141 PF11929 DUF3447: Domain of un 40.2 42 0.00091 29.1 4.1 51 714-771 7-57 (76)
142 TIGR03437 Soli_cterm Solibacte 35.4 1.1E+02 0.0023 32.4 6.9 63 522-584 4-75 (215)
143 PF03106 WRKY: WRKY DNA -bindi 34.9 17 0.00036 30.8 0.7 9 70-78 2-10 (60)
144 PF09099 Qn_am_d_aIII: Quinohe 34.8 1.2E+02 0.0026 27.3 6.1 64 508-580 2-70 (81)
145 PF05587 Anth_Ig: Anthrax rece 27.9 20 0.00043 33.8 0.0 74 509-585 7-88 (105)
146 smart00774 WRKY DNA binding do 27.5 23 0.00051 30.0 0.4 9 70-78 2-10 (59)
147 KOG1310 WD40 repeat protein [G 22.8 41 0.0009 39.9 1.3 104 28-136 184-306 (758)
148 PF01913 FTR: Formylmethanofur 21.3 42 0.0009 33.3 0.8 20 63-83 119-138 (144)
149 PF06128 Shigella_OspC: Shigel 20.2 1.6E+02 0.0035 31.7 4.8 46 725-770 229-278 (284)
150 PF06128 Shigella_OspC: Shigel 20.1 1.9E+02 0.004 31.3 5.3 44 695-738 232-279 (284)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=4e-102 Score=903.44 Aligned_cols=635 Identities=38% Similarity=0.604 Sum_probs=424.1
Q ss_pred CChhhHHHHHHHHHHhcCChHHHHHHHhccccceeCcCCCCCCCCcceEeeehhhhhhhcccCccceeccCCcchHhhhh
Q 004027 10 GNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHE 89 (778)
Q Consensus 10 ~~~~~~~~~~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~~gs~~l~~r~~~~~fr~dg~~w~kkk~g~~~~e~h~ 89 (778)
...||+..|+++|++|||+|+||+.||+||++|.++++|++||.+||+||||||+|||||||||+|||||||||||||||
T Consensus 20 l~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~WkKkkDGKtirEaHe 99 (975)
T KOG0520|consen 20 LQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHNWKKKKDGKTIREAHE 99 (975)
T ss_pred hhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchhhhhcCCCCcChHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCEeeEEEEeeccccccccceeeeecccccccceEEEeeeeccCCccccccccccCCCCCCCCCCccCCCCCCccC
Q 004027 90 RLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEG 169 (778)
Q Consensus 90 ~lkv~~~~~~~~~yah~~~~~~f~rr~y~~l~~~~~~ivlvhy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 169 (778)
||||||+|+||||||||++||||||||||||++.++||||||||||++.+. ...+..+.. .+
T Consensus 100 ~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~-~~~~~~~~~-----------------~s 161 (975)
T KOG0520|consen 100 KLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNED-AAKGAGEIF-----------------SS 161 (975)
T ss_pred hhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccc-cccCccccc-----------------cc
Confidence 999999999999999999999999999999999999999999999998662 111111110 12
Q ss_pred CCCCCCCCCCCCCCCcccc-CCcCcc-CcchhhhhhcccCCCCCccccccc------cccchhhhhcccCCCCCCCCCCc
Q 004027 170 SQSSGFHPNSYQMPSQTAD-TSLNSA-QASEYEDAESVYNNQASSRFHSFL------DLQQPVAEKIDAGLADPYYPSSL 241 (778)
Q Consensus 170 ~~s~~~~~~~~~~~s~~~~-~s~~s~-~~se~e~~~s~~~~~~~s~~~~~~------~~q~~~~~~~~~~~~~~~~~~~~ 241 (778)
++++.- + ...+-.+ .+|.-. +.+..++++++++.+....+.... .-+++.++..+ +++
T Consensus 162 ~~sd~~--~---S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~~~~~~g~~~~~s~~h~i~~~~~~s~~-----~~~---- 227 (975)
T KOG0520|consen 162 IISDKA--W---SLNQLAGQLSPIFHNHSSVNEDVAEINSNQTGNALGSVFGNSRNHRIRLHEVNSLD-----PLY---- 227 (975)
T ss_pred cccccc--c---cHHHhhcccCcchhcccchHHHHHHHhhhccccccccccCcchhhhhcccccCCcc-----ccc----
Confidence 222221 0 1111111 122111 335566666654332222221110 11111111100 000
Q ss_pred ccCcCCCcccCCCCCCCCCccccCCCCCCCCCCcCCCCCCCCCCchHHHhhhcCCCCCCCCCccCCCCCCCCccCCCCcc
Q 004027 242 TNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFT 321 (778)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (778)
...++..+ ... ...++..-. . ........+.+...|.++++++....-....++ .
T Consensus 228 ----~~p~s~~s-~~~-~~~~~~~~~---~-~~~~~~~rs~~~s~~te~l~n~~~~~~~~g~s~---------------s 282 (975)
T KOG0520|consen 228 ----KLPVSDDS-LNL-SAPKPIDLP---K-GPTSVKQRSSSPSYFTEILGNAPSGLVSQGNSL---------------S 282 (975)
T ss_pred ----cccccCCc-ccc-ccCCCcccc---c-CCcchhhcCCCCcchhhhcccCCCccccccccc---------------c
Confidence 00111000 000 000000000 0 000000011233457777776662111111110 0
Q ss_pred CcccccccccCcccccccccccccCCcCCCCCccccccccccccccccccccccccccCCCCCCCCCCCCCCCCCccccc
Q 004027 322 NSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQ 401 (778)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (778)
+.+ +.. ..|+.- ..+..+ ..+ ...|.|... +.+....+
T Consensus 283 ~~l--~~i--------~~~~~~--------~~~~~~-----------------~p~----~~nf~~~ss---~~s~~~~~ 320 (975)
T KOG0520|consen 283 SSL--QRI--------SSFTGL--------DNAAYE-----------------QPN----SQNFEPNSS---LNSHVTGQ 320 (975)
T ss_pred cch--hhc--------cccccc--------cccccc-----------------CCc----ccccccccc---CCCCcccc
Confidence 000 000 011110 000000 000 000000000 00000000
Q ss_pred CCccccccCcCCCCCcccccccccccchhcccccccc--cccccccccchhhHHHhhcCccccccccCCCCccccccccc
Q 004027 402 LPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDG--STEGLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVESE 479 (778)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~l~~~dsf~rWm~~e~~~~~~~~~~~s~~~~~~~~~~~ 479 (778)
..+.+ .....+...+-.-| .....+. ..+||++.|||+|||+ .+++..|+.-.++-+.+|....+
T Consensus 321 ----~~g~g--~~~~~~sa~~~~~P-----~~~~~~~~~~~~~l~sgdsf~~~~~-t~~e~~d~~q~~s~~~~~~p~~~- 387 (975)
T KOG0520|consen 321 ----SYGQG--LQARSPSATSESRP-----ITSAADAALSELGLKSGDSFSRWAS-TFGEISDLGQDPSGEAVWTPEND- 387 (975)
T ss_pred ----ccCcc--ccCCCcccccccCC-----cchhhccccccccccccccccchhh-hhcccccCCCCCccccccccCCC-
Confidence 00000 00011111112223 1112231 2789999999999995 88888887733443567875521
Q ss_pred CCCCCCCCCCccccccccCCCCcCCCCceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEee
Q 004027 480 NGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVA 559 (778)
Q Consensus 480 ~~~~~~~~~~~~~l~~~~~~~s~~q~q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q 559 (778)
...+ +.+.+++| +++|+|+|+||||+|+|+.||+||+|+|.+ .+.+..+|+||||+++|||++||
T Consensus 388 -~~~~---------~~s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~----~~~~~~~ysc~Fg~~~VPAeliq 452 (975)
T KOG0520|consen 388 -PMGP---------PGSFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFP----QDETRSNYSCMFGEQRVPAELIQ 452 (975)
T ss_pred -cCCC---------cccccCCC-CCcceeeeeccCcccccCCCCcEEEEecCc----cccCCCceEEEeCCccccHHHhh
Confidence 1111 11236777 449999999999999999999999999972 23457899999999999999999
Q ss_pred CCceeeecCCCCCCcccEEEEeC-CCcccccceeeeeccCCCCCccccccCCCcchhhhhhhHHHhhc-ccCCCCCCCCC
Q 004027 560 GGVLRCHTSSQKVGRVPFYVTCS-NRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLC-LTSVSTPNYDP 637 (778)
Q Consensus 560 ~GVLrC~~PpH~pG~VpL~Vtcs-nr~~cSEVr~FEYr~~~~~~~~~~~~~~s~~e~~Lq~RL~~LL~-l~~~~~~~~~~ 637 (778)
+|||||+||||.||+|+|||+|+ ++.+|||+|+|+|...+.+..+..+......++.|+.||..|+. ..........+
T Consensus 453 ~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s~~d~~~~~sl~~rl~~~~~r~~~~~~s~~~~ 532 (975)
T KOG0520|consen 453 EGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQQIDKLSWEDFLFQMSLLHRLETMLNRKQSILSSKPST 532 (975)
T ss_pred cceeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcccccccccccchhhhHHHHHHHHHHHHhHhHhhccCCc
Confidence 99999999999999999999998 89999999999999988776555433344555666667777766 22223344555
Q ss_pred CChhhHHH--HHHHHHhhhcCCCchHHH-HHHhhcccCCChhHHHHHHHHHHHHhchHHHHHHHHHhC-CCCCCccCCCC
Q 004027 638 SNLSDISQ--LNSKISSLLKDENDDWDL-MLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEG-GKGPCVLDHCG 713 (778)
Q Consensus 638 s~~~ek~~--l~~kI~sllk~Dd~~w~~-Llk~~~~~~~s~d~~~d~lL~~alk~kl~e~L~e~Lle~-GadvN~~D~~G 713 (778)
.+..+++. ++.|+..+ .++|.+ +++.+..+......+++.+|.+++++.++.|+.+++++- |......|.+|
T Consensus 533 ~n~~~~~~~~l~skv~~l----~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~ 608 (975)
T KOG0520|consen 533 ENTSDAESGNLASKVVHL----LNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDG 608 (975)
T ss_pred cccccccchhHHHHHHHH----HHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccC
Confidence 66666666 88999888 788998 888888888888899999999999999999999999986 77788899999
Q ss_pred ccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCccccc
Q 004027 714 QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQRNCWL 776 (778)
Q Consensus 714 qTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~~c~~ 776 (778)
+..+|++|.+|+.|++.+.+..|..++++|.+||||||||+.+||+.++..|+.-...+ |++
T Consensus 609 qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~-~~~ 670 (975)
T KOG0520|consen 609 QGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADP-GAV 670 (975)
T ss_pred CChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhcccc-ccc
Confidence 99999999999999999999999999999999999999999999999999988776655 443
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=5e-62 Score=447.72 Aligned_cols=117 Identities=67% Similarity=1.210 Sum_probs=114.5
Q ss_pred HHHHHHhcCChHHHHHHHhccccceeCcCCCCCCCCcceEeeehhhhhhhcccCccceeccCCcchHhhhhhhccCCEee
Q 004027 19 LIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDV 98 (778)
Q Consensus 19 ~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~~gs~~l~~r~~~~~fr~dg~~w~kkk~g~~~~e~h~~lkv~~~~~ 98 (778)
++| ++|||+|+|||+||+||++|.+..+||++|+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus 2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~ 80 (118)
T PF03859_consen 2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV 80 (118)
T ss_pred chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence 345 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccccccccceeeeecccccccceEEEeeeecc
Q 004027 99 LHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136 (778)
Q Consensus 99 ~~~~yah~~~~~~f~rr~y~~l~~~~~~ivlvhy~~~~ 136 (778)
||||||||++||+||||||||||++||||||||||||+
T Consensus 81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 99999999999999999999999999999999999985
No 3
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.56 E-value=1.2e-14 Score=126.67 Aligned_cols=80 Identities=21% Similarity=0.378 Sum_probs=71.0
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCC-CCCCcccEEEEeCCCccc
Q 004027 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-QKVGRVPFYVTCSNRLSC 587 (778)
Q Consensus 509 sI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~Pp-H~pG~VpL~Vtcsnr~~c 587 (778)
.|++|+|+||+++|||||+|+|.+|.++ +.|+||+..|-.|.|++.+|+|.+|| |.||.|.+.++.....-|
T Consensus 2 ~I~ai~P~eG~~tGGt~VtI~GenF~~g-------l~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~~ 74 (85)
T cd01175 2 CIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFC 74 (85)
T ss_pred cccEecCCCCcccCCeEEEEECCCCCCC-------cEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceeec
Confidence 6999999999999999999999999987 66999999999999999999999999 799999999998777655
Q ss_pred cc-ceeeee
Q 004027 588 SE-VREFEY 595 (778)
Q Consensus 588 SE-Vr~FEY 595 (778)
.. .-.|-|
T Consensus 75 ~~~p~~f~y 83 (85)
T cd01175 75 KGTPGRFVY 83 (85)
T ss_pred cCCCceEEe
Confidence 32 345555
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=3.8e-15 Score=147.38 Aligned_cols=92 Identities=24% Similarity=0.143 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.||.|+-.+.++... +|+++|+.++.+|..|+||||-||+.|...++++|+..|+.+|.+|+.||||||+|..-||
T Consensus 106 G~T~LHyAagK~r~eIaq-lLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~ 184 (226)
T KOG4412|consen 106 GQTCLHYAAGKGRLEIAQ-LLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGH 184 (226)
T ss_pred CcceehhhhcCChhhHHH-HHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccC
Confidence 456788888878777654 8999999999999999999999999999999999999999999999999999999988899
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++.+|+.++..
T Consensus 185 ~d~a~lLV~~gAd 197 (226)
T KOG4412|consen 185 PDVAVLLVRAGAD 197 (226)
T ss_pred chHHHHHHHhccc
Confidence 9999999988764
No 5
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.39 E-value=1.9e-12 Score=113.56 Aligned_cols=85 Identities=27% Similarity=0.216 Sum_probs=75.3
Q ss_pred HHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHH
Q 004027 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTC 762 (778)
Q Consensus 683 L~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV 762 (778)
|+.|++.+..+.+. .+++.+.+++. |.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++
T Consensus 1 L~~A~~~~~~~~~~-~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILK-FLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHH-HHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHH-HHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence 57788888888776 77778887775 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCc
Q 004027 763 RSGFFHWTQR 772 (778)
Q Consensus 763 ~lLL~~~~q~ 772 (778)
++|+.+...-
T Consensus 76 ~~Ll~~g~~~ 85 (89)
T PF12796_consen 76 KLLLEHGADV 85 (89)
T ss_dssp HHHHHTTT-T
T ss_pred HHHHHcCCCC
Confidence 9999886543
No 6
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=1.3e-12 Score=129.50 Aligned_cols=98 Identities=19% Similarity=0.125 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHH
Q 004027 676 EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (778)
Q Consensus 676 d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~ 755 (778)
++..-+.||.++..+..+.+..++-..|+++|..+..|+|+|||||..|..+++++|++.|+.|+++|+.|.||||-||.
T Consensus 69 DdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAa 148 (226)
T KOG4412|consen 69 DDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAA 148 (226)
T ss_pred cccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHh
Confidence 34455678888888877776644444499999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCcc
Q 004027 756 CGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 756 ~Gh~eiV~lLL~~~~q~~ 773 (778)
.|..+++++|++.....+
T Consensus 149 vGklkvie~Li~~~a~~n 166 (226)
T KOG4412|consen 149 VGKLKVIEYLISQGAPLN 166 (226)
T ss_pred ccchhhHHHHHhcCCCCC
Confidence 999999999998876554
No 7
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.26 E-value=9.6e-12 Score=100.48 Aligned_cols=54 Identities=31% Similarity=0.369 Sum_probs=46.9
Q ss_pred CccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHH
Q 004027 713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGF 766 (778)
Q Consensus 713 GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL 766 (778)
|+|+||+||..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999999999999999999999999999999986
No 8
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.23 E-value=3.6e-11 Score=118.87 Aligned_cols=95 Identities=15% Similarity=-0.051 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhchHHH--HHHHHHhCCCCCCccC-CCCccHHHHHHHcCCHhHHHHHHh-CCCCcccccCCCCcHHHHHH
Q 004027 679 KEKLVQKLLKEKLQVW--LVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHWAA 754 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~--L~e~Lle~GadvN~~D-~~GqTpLHlAA~lG~~~~Vk~LL~-~GAdvn~rD~~G~TPLH~AA 754 (778)
..+.||.|+..+..+. +++.|+..|+++|.++ ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+
T Consensus 57 g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~ 136 (166)
T PHA02743 57 GRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAY 136 (166)
T ss_pred CCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHH
Confidence 4668999988765443 3568889999999998 589999999999999999999995 89999999999999999999
Q ss_pred HCCCHHHHHHHHhccCCcc
Q 004027 755 YCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 755 ~~Gh~eiV~lLL~~~~q~~ 773 (778)
..|+.+++++|+.+..+.+
T Consensus 137 ~~~~~~iv~~Ll~~ga~~~ 155 (166)
T PHA02743 137 KMRDRRMMEILRANGAVCD 155 (166)
T ss_pred HcCCHHHHHHHHHcCCCCC
Confidence 9999999999999887654
No 9
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.23 E-value=8.1e-12 Score=102.22 Aligned_cols=55 Identities=31% Similarity=0.384 Sum_probs=33.6
Q ss_pred HHhCC-CCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHH
Q 004027 699 AAEGG-KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753 (778)
Q Consensus 699 Lle~G-advN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~A 753 (778)
|++.| .++|..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 34555 78999999999999999999999999999999999999999999999998
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.21 E-value=2.5e-11 Score=138.61 Aligned_cols=89 Identities=19% Similarity=0.112 Sum_probs=48.5
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccC-CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D-~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.+||.|+.++..+.+. .|+++|+++|..+ ..+.|||||||..|+..+|.+|+++||+++.+|.+|.||||+||..||.
T Consensus 80 tlLHWAAiNNrl~v~r-~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~ 158 (600)
T KOG0509|consen 80 TLLHWAAINNRLDVAR-YLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHT 158 (600)
T ss_pred cceeHHHHcCcHHHHH-HHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCch
Confidence 3455554444444332 5555555555544 4455555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhccC
Q 004027 760 NTCRSGFFHWT 770 (778)
Q Consensus 760 eiV~lLL~~~~ 770 (778)
-+|.+||.++.
T Consensus 159 ~~vayll~~~~ 169 (600)
T KOG0509|consen 159 ALVAYLLSKGA 169 (600)
T ss_pred HHHHHHHHhcc
Confidence 55555555553
No 11
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.19 E-value=3.7e-11 Score=118.65 Aligned_cols=92 Identities=20% Similarity=0.092 Sum_probs=76.3
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
++..++..+.+..+.+.|.+....+|.+|.+|.||||-||..|+..+|+.|+..||+++++...||||||-||...+.+|
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v 145 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV 145 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence 33344444444555544444444599999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCcc
Q 004027 762 CRSGFFHWTQRN 773 (778)
Q Consensus 762 V~lLL~~~~q~~ 773 (778)
+.+||.+....+
T Consensus 146 a~~LLqhgaDVn 157 (228)
T KOG0512|consen 146 AGRLLQHGADVN 157 (228)
T ss_pred HHHHHhccCccc
Confidence 999999988765
No 12
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.18 E-value=8.7e-11 Score=130.83 Aligned_cols=91 Identities=16% Similarity=0.056 Sum_probs=63.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..|..+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 103 ~tpL~~A~~~~~~~iv~-~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~ 181 (413)
T PHA02875 103 MTPLHLATILKKLDIMK-LLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDI 181 (413)
T ss_pred CCHHHHHHHhCCHHHHH-HHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 45666676666665543 66667777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHhccCC
Q 004027 760 NTCRSGFFHWTQ 771 (778)
Q Consensus 760 eiV~lLL~~~~q 771 (778)
+++++||.+...
T Consensus 182 eiv~~Ll~~ga~ 193 (413)
T PHA02875 182 AICKMLLDSGAN 193 (413)
T ss_pred HHHHHHHhCCCC
Confidence 777777766543
No 13
>PHA02795 ankyrin-like protein; Provisional
Probab=99.18 E-value=6.7e-11 Score=133.28 Aligned_cols=94 Identities=18% Similarity=0.019 Sum_probs=82.9
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC---
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG--- 757 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G--- 757 (778)
+.++.+..++..+.+ +.|+..|+++|.+|..|+||||+||..|+.+++++|+++||+++.+|..|+||||+|+..|
T Consensus 190 t~l~~a~~~~~~eIv-e~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~ 268 (437)
T PHA02795 190 TRGFLVDEPTVLEIY-KLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVI 268 (437)
T ss_pred chhHHHHhcCHHHHH-HHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcc
Confidence 345556666655554 5899999999999999999999999999999999999999999999999999999999998
Q ss_pred -----CHHHHHHHHhccCCcccc
Q 004027 758 -----RPNTCRSGFFHWTQRNCW 775 (778)
Q Consensus 758 -----h~eiV~lLL~~~~q~~c~ 775 (778)
|.+++++||.+...-+|+
T Consensus 269 ~~~~~~~eIvelLL~~gadI~~~ 291 (437)
T PHA02795 269 ARRETHLKILEILLREPLSIDCI 291 (437)
T ss_pred cccccHHHHHHHHHhCCCCCCch
Confidence 579999999988776664
No 14
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.18 E-value=5.3e-11 Score=115.27 Aligned_cols=93 Identities=14% Similarity=-0.107 Sum_probs=80.8
Q ss_pred HHHHHHHHHhchHHH--HHHHHHhCCCCCCccC-CCCccHHHHHHHcCCHhHHHHHHh-CCCCcccccCCCCcHHHHHHH
Q 004027 680 EKLVQKLLKEKLQVW--LVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHWAAY 755 (778)
Q Consensus 680 d~lL~~alk~kl~e~--L~e~Lle~GadvN~~D-~~GqTpLHlAA~lG~~~~Vk~LL~-~GAdvn~rD~~G~TPLH~AA~ 755 (778)
.+.||.++..+..+. +.+.|++.|+++|.++ ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+.
T Consensus 56 ~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~ 135 (154)
T PHA02736 56 KQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACE 135 (154)
T ss_pred CEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHH
Confidence 456777777765432 3457889999999998 589999999999999999999998 599999999999999999999
Q ss_pred CCCHHHHHHHHhccCCc
Q 004027 756 CGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 756 ~Gh~eiV~lLL~~~~q~ 772 (778)
.|+.+++++|+.+..+.
T Consensus 136 ~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 136 RHDAKMMNILRAKGAQC 152 (154)
T ss_pred cCCHHHHHHHHHcCCCC
Confidence 99999999999887764
No 15
>PHA02791 ankyrin-like protein; Provisional
Probab=99.17 E-value=9.2e-11 Score=126.15 Aligned_cols=87 Identities=13% Similarity=0.059 Sum_probs=45.0
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCC-cHHHHHHHCCCH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW-TALHWAAYCGRP 759 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~-TPLH~AA~~Gh~ 759 (778)
+.|+.|+..+..+.+. .|+..|++++.+|..|+||||+||..|+.+++++|+.+|++++.++..|| ||||+|+..|+.
T Consensus 63 TpLh~Aa~~g~~eiV~-lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~ 141 (284)
T PHA02791 63 FPLHQAATLEDTKIVK-ILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDV 141 (284)
T ss_pred CHHHHHHHCCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCH
Confidence 3455555544444332 44445555555555555555555555555555555555555555555554 455555555555
Q ss_pred HHHHHHHhc
Q 004027 760 NTCRSGFFH 768 (778)
Q Consensus 760 eiV~lLL~~ 768 (778)
++|++||.+
T Consensus 142 eivk~LL~~ 150 (284)
T PHA02791 142 SIVSYFLSE 150 (284)
T ss_pred HHHHHHHhc
Confidence 555555543
No 16
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.15 E-value=1.3e-10 Score=100.67 Aligned_cols=84 Identities=24% Similarity=0.321 Sum_probs=74.8
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeE-EeeCCceeeecCCCCCCcccEEEEeCCCcc
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAE-IVAGGVLRCHTSSQKVGRVPFYVTCSNRLS 586 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae-i~q~GVLrC~~PpH~pG~VpL~Vtcsnr~~ 586 (778)
+.|++|+|+|++..||++|+|.|.+|.. ....+.|+||+...++. ++.+..|+|.+|++.+|.++++|..++...
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~ 76 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQI 76 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCe
Confidence 3799999999999999999999999921 13579999999999998 999999999999999999999999998888
Q ss_pred cccceeeee
Q 004027 587 CSEVREFEY 595 (778)
Q Consensus 587 cSEVr~FEY 595 (778)
+++...|+|
T Consensus 77 ~~~~~~F~Y 85 (85)
T PF01833_consen 77 YSNNTSFTY 85 (85)
T ss_dssp EEEEEEEEE
T ss_pred EECCeeeEC
Confidence 899999998
No 17
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.15 E-value=6e-11 Score=135.49 Aligned_cols=106 Identities=23% Similarity=0.231 Sum_probs=88.8
Q ss_pred HHHHHHhhcccCCChhHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcc
Q 004027 661 WDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNIN 740 (778)
Q Consensus 661 w~~Llk~~~~~~~s~d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn 740 (778)
.+.++....+-+...-....+.||.|+++++...+. .|++.|++++.+|.+|.|+||+||..|+.-+|-+||.+|+++|
T Consensus 94 ~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~-lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d 172 (600)
T KOG0509|consen 94 ARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVD-LLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADID 172 (600)
T ss_pred HHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHH-HHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCC
Confidence 345554433322222234567899999999887765 8999999999999999999999999999999999999999999
Q ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHh
Q 004027 741 FRDVNGWTALHWAAYCGRPNTCRSGFF 767 (778)
Q Consensus 741 ~rD~~G~TPLH~AA~~Gh~eiV~lLL~ 767 (778)
.+|.+|+|||||||++|+...++.||.
T Consensus 173 ~~D~~grTpLmwAaykg~~~~v~~LL~ 199 (600)
T KOG0509|consen 173 LRDNNGRTPLMWAAYKGFALFVRRLLK 199 (600)
T ss_pred CcCCCCCCHHHHHHHhcccHHHHHHHH
Confidence 999999999999999999987777664
No 18
>PHA02741 hypothetical protein; Provisional
Probab=99.13 E-value=1.7e-10 Score=114.03 Aligned_cols=92 Identities=12% Similarity=0.019 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHhchH---HHHHHHHHhCCCCCCccCC-CCccHHHHHHHcCCHhHHHHHHh-CCCCcccccCCCCcHHHH
Q 004027 678 VKEKLVQKLLKEKLQ---VWLVQKAAEGGKGPCVLDH-CGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHW 752 (778)
Q Consensus 678 ~~d~lL~~alk~kl~---e~L~e~Lle~GadvN~~D~-~GqTpLHlAA~lG~~~~Vk~LL~-~GAdvn~rD~~G~TPLH~ 752 (778)
...+.||.|+..+.. ..+.+.|+..|+++|.++. .|+||||+|+..++.+++++|+. .|++++.+|..|+||||+
T Consensus 59 ~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~ 138 (169)
T PHA02741 59 AGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFEL 138 (169)
T ss_pred CCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHH
Confidence 356788888887763 2344577888999998885 89999999999999999999997 599999999999999999
Q ss_pred HHHCCCHHHHHHHHhcc
Q 004027 753 AAYCGRPNTCRSGFFHW 769 (778)
Q Consensus 753 AA~~Gh~eiV~lLL~~~ 769 (778)
|+..|+.+++++|+...
T Consensus 139 A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 139 AIDNEDVAMMQILREIV 155 (169)
T ss_pred HHHCCCHHHHHHHHHHH
Confidence 99999999999887653
No 19
>PHA02791 ankyrin-like protein; Provisional
Probab=99.13 E-value=2e-10 Score=123.48 Aligned_cols=92 Identities=17% Similarity=0.054 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.|+..+..+.+. .|++.|++++..+ |.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|
T Consensus 29 ~G~TpLh~Aa~~g~~eiv~-~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g 105 (284)
T PHA02791 29 HGHSALYYAIADNNVRLVC-TLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSG 105 (284)
T ss_pred CCCcHHHHHHHcCCHHHHH-HHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 3567899999999877664 8889999888764 789999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCc
Q 004027 758 RPNTCRSGFFHWTQR 772 (778)
Q Consensus 758 h~eiV~lLL~~~~q~ 772 (778)
+.++|++|+.+..+-
T Consensus 106 ~~eivk~Ll~~gadi 120 (284)
T PHA02791 106 NMQTVKLFVKKNWRL 120 (284)
T ss_pred CHHHHHHHHHCCCCc
Confidence 999999999987653
No 20
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.13 E-value=2.3e-10 Score=139.16 Aligned_cols=90 Identities=22% Similarity=0.193 Sum_probs=80.7
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
...|+.|+..+..+.+. .+++.|+++|..|..|+||||+||..|+.+++++|+.+|+++|.+|.+|+||||+|+..||.
T Consensus 526 ~~~L~~Aa~~g~~~~l~-~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~ 604 (823)
T PLN03192 526 ASNLLTVASTGNAALLE-ELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHH 604 (823)
T ss_pred hhHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence 34577777778776654 78899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccC
Q 004027 760 NTCRSGFFHWT 770 (778)
Q Consensus 760 eiV~lLL~~~~ 770 (778)
+++++|+...+
T Consensus 605 ~iv~~L~~~~~ 615 (823)
T PLN03192 605 KIFRILYHFAS 615 (823)
T ss_pred HHHHHHHhcCc
Confidence 99999886544
No 21
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.11 E-value=2.2e-10 Score=113.31 Aligned_cols=87 Identities=22% Similarity=0.114 Sum_probs=73.8
Q ss_pred HHHHHHHHhchHHHHH---HHHHhCCCCCCccCCCCccHHHHHHHcCCHhH---HHHHHhCCCCccccc-CCCCcHHHHH
Q 004027 681 KLVQKLLKEKLQVWLV---QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWA---LEPTTVAGVNINFRD-VNGWTALHWA 753 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~---e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~---Vk~LL~~GAdvn~rD-~~G~TPLH~A 753 (778)
..|+.+++.+..+.+. +.|.+.|+.++.+|..|+||||+||..|..++ +++|+..|+++|.+| ..|+||||+|
T Consensus 22 ~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A 101 (166)
T PHA02743 22 NTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIA 101 (166)
T ss_pred cHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Confidence 3567777777664333 35667888899999999999999999988654 799999999999998 5899999999
Q ss_pred HHCCCHHHHHHHHh
Q 004027 754 AYCGRPNTCRSGFF 767 (778)
Q Consensus 754 A~~Gh~eiV~lLL~ 767 (778)
+..|+.+++++|+.
T Consensus 102 ~~~g~~~iv~~Ll~ 115 (166)
T PHA02743 102 ASTKNYELAEWLCR 115 (166)
T ss_pred HHhCCHHHHHHHHh
Confidence 99999999999985
No 22
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.11 E-value=3.4e-10 Score=122.52 Aligned_cols=88 Identities=14% Similarity=-0.017 Sum_probs=43.2
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccC----CCCccHHHHHHHcCCHhHHHHHHhCCCCcccc-cCCCCcHHHHHHHC
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLD----HCGQGVLHFAAALGYDWALEPTTVAGVNINFR-DVNGWTALHWAAYC 756 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D----~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~r-D~~G~TPLH~AA~~ 756 (778)
+|+.+++.+..+.+. .|++.|+++|.++ ..|.||||+||..|..+++++|+.+||++|.+ +..|.||||+|+..
T Consensus 36 lL~~A~~~~~~eivk-~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~ 114 (300)
T PHA02884 36 ILYSSIKFHYTDIID-AILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLH 114 (300)
T ss_pred HHHHHHHcCCHHHHH-HHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHc
Confidence 444444444433332 4445555555432 34555555555555555555555555555543 23455555555555
Q ss_pred CCHHHHHHHHhccC
Q 004027 757 GRPNTCRSGFFHWT 770 (778)
Q Consensus 757 Gh~eiV~lLL~~~~ 770 (778)
|+.+++++||.+..
T Consensus 115 ~~~eivklLL~~GA 128 (300)
T PHA02884 115 GCLKCLEILLSYGA 128 (300)
T ss_pred CCHHHHHHHHHCCC
Confidence 55555555554443
No 23
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.10 E-value=4.9e-10 Score=126.08 Aligned_cols=99 Identities=24% Similarity=0.231 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHHhchHHHHHHHHHhCCCC--CCc--cCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHH
Q 004027 676 EEVKEKLVQKLLKEKLQVWLVQKAAEGGKG--PCV--LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALH 751 (778)
Q Consensus 676 d~~~d~lL~~alk~kl~e~L~e~Lle~Gad--vN~--~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH 751 (778)
.....+++...+.+.+... . +|+.+|.. +|. .+.+|+|+||+||..|+..+.++||.+|+|+.++|.+|.|||.
T Consensus 622 ~~lgqqLl~A~~~~Dl~t~-~-lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~ 699 (749)
T KOG0705|consen 622 EPLGQQLLRAVAAEDLQTA-I-LLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALF 699 (749)
T ss_pred CchHHHHHHHHHHHHHHHH-H-HHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhh
Confidence 3455666666665554433 3 46666643 333 4667899999999999999999999999999999999999999
Q ss_pred HHHHCCCHHHHHHHHhccCCccccc
Q 004027 752 WAAYCGRPNTCRSGFFHWTQRNCWL 776 (778)
Q Consensus 752 ~AA~~Gh~eiV~lLL~~~~q~~c~~ 776 (778)
||-..|..+|+.+||.+.|+..|++
T Consensus 700 yar~a~sqec~d~llq~gcp~e~~~ 724 (749)
T KOG0705|consen 700 YARQAGSQECIDVLLQYGCPDECGL 724 (749)
T ss_pred hHhhcccHHHHHHHHHcCCCccccc
Confidence 9999999999999999999999876
No 24
>PHA03095 ankyrin-like protein; Provisional
Probab=99.09 E-value=6.3e-10 Score=125.44 Aligned_cols=96 Identities=18% Similarity=0.132 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhchHH-HHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHH
Q 004027 677 EVKEKLVQKLLKEKLQV-WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e-~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~ 755 (778)
....+.||.|+..+... .+...++..|+++|.+|..|+||||+|+..|+.+++++||..||+++.+|..|+||||+|+.
T Consensus 220 ~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~ 299 (471)
T PHA03095 220 MLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVR 299 (471)
T ss_pred CCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 34567888888876532 34557888999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCc
Q 004027 756 CGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 756 ~Gh~eiV~lLL~~~~q~ 772 (778)
.|+.+++++||.+....
T Consensus 300 ~~~~~~v~~LL~~~~~~ 316 (471)
T PHA03095 300 NNNGRAVRAALAKNPSA 316 (471)
T ss_pred hCCHHHHHHHHHhCCCH
Confidence 99999999999876543
No 25
>PHA02741 hypothetical protein; Provisional
Probab=99.08 E-value=5.4e-10 Score=110.46 Aligned_cols=89 Identities=19% Similarity=0.117 Sum_probs=71.8
Q ss_pred HHHHHHHHHhch---HHHHHHHH--HhCCCCCCccCCCCccHHHHHHHcCC----HhHHHHHHhCCCCcccccC-CCCcH
Q 004027 680 EKLVQKLLKEKL---QVWLVQKA--AEGGKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDV-NGWTA 749 (778)
Q Consensus 680 d~lL~~alk~kl---~e~L~e~L--le~GadvN~~D~~GqTpLHlAA~lG~----~~~Vk~LL~~GAdvn~rD~-~G~TP 749 (778)
.+.||.++..+. .+.+...+ ...|++++.+|..|+||||+||..|+ .+++++|+..|++++.+|. .|+||
T Consensus 22 ~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~Tp 101 (169)
T PHA02741 22 ENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTA 101 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCH
Confidence 345666665332 24443222 23467889999999999999999998 5889999999999999995 99999
Q ss_pred HHHHHHCCCHHHHHHHHhc
Q 004027 750 LHWAAYCGRPNTCRSGFFH 768 (778)
Q Consensus 750 LH~AA~~Gh~eiV~lLL~~ 768 (778)
||+|+..++.+++++||.+
T Consensus 102 Lh~A~~~~~~~iv~~Ll~~ 120 (169)
T PHA02741 102 LHLAAHRRDHDLAEWLCCQ 120 (169)
T ss_pred HHHHHHcCCHHHHHHHHhC
Confidence 9999999999999999964
No 26
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.08 E-value=1.6e-10 Score=121.37 Aligned_cols=91 Identities=20% Similarity=0.133 Sum_probs=85.4
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
.||.++++++. .+++.|+..|+.+|..+....||||+||+.|+.++|+.||...+|+|+.+.+|.|||||||..|...|
T Consensus 37 plhwaakegh~-aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqi 115 (448)
T KOG0195|consen 37 PLHWAAKEGHV-AIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQI 115 (448)
T ss_pred hhhhhhhcccH-HHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHH
Confidence 68999999965 45679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCcc
Q 004027 762 CRSGFFHWTQRN 773 (778)
Q Consensus 762 V~lLL~~~~q~~ 773 (778)
++-|+...++.+
T Consensus 116 aedli~~ga~v~ 127 (448)
T KOG0195|consen 116 AEDLISCGAAVN 127 (448)
T ss_pred HHHHHhccceee
Confidence 999999888876
No 27
>PHA02946 ankyin-like protein; Provisional
Probab=99.08 E-value=1.1e-09 Score=124.63 Aligned_cols=90 Identities=16% Similarity=0.094 Sum_probs=65.5
Q ss_pred HHHHHHH-hchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC--
Q 004027 682 LVQKLLK-EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR-- 758 (778)
Q Consensus 682 lL~~alk-~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh-- 758 (778)
.||.++. .+....+++.|+..|+++|.+|..|+||||+||..|+.++|++||++||++|.+|..|+||||+|+..++
T Consensus 40 ~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~ 119 (446)
T PHA02946 40 ILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEV 119 (446)
T ss_pred HHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCch
Confidence 4554442 2222334457777888888888888888888888888888888888888888888888888888877654
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++++|+.+...
T Consensus 120 ~e~v~lLl~~Gad 132 (446)
T PHA02946 120 IERINLLVQYGAK 132 (446)
T ss_pred HHHHHHHHHcCCC
Confidence 6778888776653
No 28
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.06 E-value=2.7e-10 Score=102.49 Aligned_cols=89 Identities=25% Similarity=0.174 Sum_probs=77.1
Q ss_pred HHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHH
Q 004027 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTC 762 (778)
Q Consensus 683 L~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV 762 (778)
+...++++.++.+.+ ....|.++|.. ..|++|||+||-.|...++++|+..||+++.+|+.|.|||--|+.-||.+||
T Consensus 6 ~~W~vkNG~~DeVk~-~v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQ-SVNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred HhhhhccCcHHHHHH-HHHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 455778888888774 44455777743 4899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCcc
Q 004027 763 RSGFFHWTQRN 773 (778)
Q Consensus 763 ~lLL~~~~q~~ 773 (778)
++||.....+.
T Consensus 84 klLL~~GAdrt 94 (117)
T KOG4214|consen 84 KLLLQNGADRT 94 (117)
T ss_pred HHHHHcCcccc
Confidence 99999887653
No 29
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=99.06 E-value=8.2e-10 Score=98.00 Aligned_cols=84 Identities=21% Similarity=0.266 Sum_probs=71.7
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCC-CCCcccEEEEeCCCcc
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRLS 586 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH-~pG~VpL~Vtcsnr~~ 586 (778)
..|+.|+|..|+..|||+|+|.|.+|..+ ....|+||+.+.....+.+..|.|.+|++ .+|.|+|.|..++...
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~~-----~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~~~ 75 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNAG-----SSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGARR 75 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCCC-----CeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCccc
Confidence 37999999999999999999999999875 44889999998777778899999999998 6799999999987633
Q ss_pred cccceeeeecc
Q 004027 587 CSEVREFEYRA 597 (778)
Q Consensus 587 cSEVr~FEYr~ 597 (778)
+....|+|.+
T Consensus 76 -~~~~~F~Y~~ 85 (85)
T cd01179 76 -LAPLVFTYTE 85 (85)
T ss_pred -CCCccEEEeC
Confidence 4456899863
No 30
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.06 E-value=5.7e-10 Score=127.18 Aligned_cols=94 Identities=17% Similarity=0.029 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC-C
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC-G 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~-G 757 (778)
..+.||.|+..+..+.+. .|++.|++++..|..|.||||+|+..|+.++++.|+..|++++.+|..|+||||+|+.. +
T Consensus 168 g~tpLh~A~~~~~~~iv~-~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~ 246 (477)
T PHA02878 168 GNTALHYATENKDQRLTE-LLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCK 246 (477)
T ss_pred CCCHHHHHHhCCCHHHHH-HHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcC
Confidence 456899999998877765 88889999999999999999999999999999999999999999999999999999975 7
Q ss_pred CHHHHHHHHhccCCcc
Q 004027 758 RPNTCRSGFFHWTQRN 773 (778)
Q Consensus 758 h~eiV~lLL~~~~q~~ 773 (778)
+.+++++||.+....+
T Consensus 247 ~~~iv~~Ll~~gadvn 262 (477)
T PHA02878 247 DYDILKLLLEHGVDVN 262 (477)
T ss_pred CHHHHHHHHHcCCCCC
Confidence 8999999998876654
No 31
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=3.3e-10 Score=126.40 Aligned_cols=87 Identities=25% Similarity=0.271 Sum_probs=74.8
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
||..++ ++-++.+. .++..-.|+...+..|.|+||-|...||.+||++||+.|+|||+.|.+||||||.||.|+..-|
T Consensus 554 LLDaaL-eGEldlVq-~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 554 LLDAAL-EGELDLVQ-RIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHhhhh-cchHHHHH-HHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence 344444 44445544 6666667888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccC
Q 004027 762 CRSGFFHWT 770 (778)
Q Consensus 762 V~lLL~~~~ 770 (778)
++.|+.+..
T Consensus 632 ckqLVe~Ga 640 (752)
T KOG0515|consen 632 CKQLVESGA 640 (752)
T ss_pred HHHHHhccc
Confidence 999998875
No 32
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.05 E-value=6.7e-10 Score=125.02 Aligned_cols=93 Identities=19% Similarity=0.084 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.||.|+..+..+.+. .|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 123 ~g~T~Lh~A~~~~~~~~v~-~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g 201 (434)
T PHA02874 123 ELKTFLHYAIKKGDLESIK-MLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYG 201 (434)
T ss_pred CCccHHHHHHHCCCHHHHH-HHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 3457899999999888765 888999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCC
Q 004027 758 RPNTCRSGFFHWTQ 771 (778)
Q Consensus 758 h~eiV~lLL~~~~q 771 (778)
+.+++++|+.+...
T Consensus 202 ~~~iv~~Ll~~g~~ 215 (434)
T PHA02874 202 DYACIKLLIDHGNH 215 (434)
T ss_pred CHHHHHHHHhCCCC
Confidence 99999999987654
No 33
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.04 E-value=4.8e-10 Score=136.91 Aligned_cols=95 Identities=21% Similarity=0.118 Sum_probs=74.9
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
.-..++.+...+....+ ..+.+.|++++.++.+|.||||.||..|+..+|++||++||+++.+|+.||||||.||..||
T Consensus 507 ~l~~lhla~~~~~v~~~-~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~ 585 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVA-KILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGH 585 (1143)
T ss_pred ccchhhhhhhhhhHHHH-HHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcCh
Confidence 44456666666654444 37778888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhccCCccc
Q 004027 759 PNTCRSGFFHWTQRNC 774 (778)
Q Consensus 759 ~eiV~lLL~~~~q~~c 774 (778)
.+|+.+|+++....+|
T Consensus 586 ~~i~~LLlk~GA~vna 601 (1143)
T KOG4177|consen 586 NDIAELLLKHGASVNA 601 (1143)
T ss_pred HHHHHHHHHcCCCCCc
Confidence 8888888888877663
No 34
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.04 E-value=9.2e-10 Score=112.86 Aligned_cols=91 Identities=11% Similarity=-0.034 Sum_probs=66.5
Q ss_pred HHHHHHHHHHh---chHHHHHHHHHhCCCCCCccCCCCccHHHHHHH--cCCHhHHHHHHhCCCCcccccCCCCcHHHH-
Q 004027 679 KEKLVQKLLKE---KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAA--LGYDWALEPTTVAGVNINFRDVNGWTALHW- 752 (778)
Q Consensus 679 ~d~lL~~alk~---kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~--lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~- 752 (778)
..+.||.++.. +..+. ++.|++.|+++|.+|..|+||||+|+. .++.+++++|+..|++++.+|..|.||||.
T Consensus 87 g~TpLh~a~~~~~~~~~ei-v~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~ 165 (209)
T PHA02859 87 NLSALHHYLSFNKNVEPEI-LKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSY 165 (209)
T ss_pred CCCHHHHHHHhCccccHHH-HHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHH
Confidence 34566765532 23344 447778888888888888888888765 457788888888888888888888888884
Q ss_pred HHHCCCHHHHHHHHhccC
Q 004027 753 AAYCGRPNTCRSGFFHWT 770 (778)
Q Consensus 753 AA~~Gh~eiV~lLL~~~~ 770 (778)
|+..++.+++++|+.+..
T Consensus 166 a~~~~~~~iv~~Ll~~Ga 183 (209)
T PHA02859 166 ILFHSDKKIFDFLTSLGI 183 (209)
T ss_pred HHhcCCHHHHHHHHHcCC
Confidence 566778888888887654
No 35
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.03 E-value=2.4e-10 Score=126.43 Aligned_cols=91 Identities=19% Similarity=0.122 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|..||-+++.+.+. .|++.|+|++..|..|.|-||+||..|+.+++++|++.|||+|.++..|.||||.|+..||
T Consensus 117 NStPLraACfDG~leivK-yLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~ 195 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVK-YLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGS 195 (615)
T ss_pred CCccHHHHHhcchhHHHH-HHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhccc
Confidence 456899999999999876 7779999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccC
Q 004027 759 PNTCRSGFFHWT 770 (778)
Q Consensus 759 ~eiV~lLL~~~~ 770 (778)
.+|+++||.+..
T Consensus 196 vdivq~Ll~~ga 207 (615)
T KOG0508|consen 196 VDIVQLLLKHGA 207 (615)
T ss_pred HHHHHHHHhCCc
Confidence 999999987643
No 36
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.01 E-value=1.6e-09 Score=111.01 Aligned_cols=92 Identities=16% Similarity=0.015 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhc--hHHHHHHHHHhCCCCCCccC-CCCccHHHHHHHc---CCHhHHHHHHhCCCCcccccCCCCcHHHH
Q 004027 679 KEKLVQKLLKEK--LQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHW 752 (778)
Q Consensus 679 ~d~lL~~alk~k--l~e~L~e~Lle~GadvN~~D-~~GqTpLHlAA~l---G~~~~Vk~LL~~GAdvn~rD~~G~TPLH~ 752 (778)
..+.||.++..+ ..+. ++.|++.|+++|.++ ..|+||||+|+.. +..+++++|+++|+++|.+|..|+||||+
T Consensus 51 g~TpLh~a~~~~~~~~ei-v~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~ 129 (209)
T PHA02859 51 YETPIFSCLEKDKVNVEI-LKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHM 129 (209)
T ss_pred CCCHHHHHHHcCCCCHHH-HHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 456788887654 4444 458889999999886 4799999988764 47899999999999999999999999999
Q ss_pred HHH--CCCHHHHHHHHhccCC
Q 004027 753 AAY--CGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 753 AA~--~Gh~eiV~lLL~~~~q 771 (778)
|+. .++.+++++|+.+...
T Consensus 130 a~~~~~~~~~iv~~Li~~gad 150 (209)
T PHA02859 130 YMCNFNVRINVIKLLIDSGVS 150 (209)
T ss_pred HHHhccCCHHHHHHHHHcCCC
Confidence 875 4688999999887754
No 37
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.00 E-value=1.2e-09 Score=130.11 Aligned_cols=86 Identities=23% Similarity=0.138 Sum_probs=79.4
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
.|+.++..+..+.+ +.|++.|+++|.+|..|+||||+||..|+.+++++|+.+|++++.+|..|+||||+|+..|+.++
T Consensus 85 ~L~~aa~~G~~~~v-k~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 85 ELCQLAASGDAVGA-RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHcCCHHHH-HHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 36667777777765 48889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhc
Q 004027 762 CRSGFFH 768 (778)
Q Consensus 762 V~lLL~~ 768 (778)
+++||.+
T Consensus 164 v~~Ll~~ 170 (664)
T PTZ00322 164 VQLLSRH 170 (664)
T ss_pred HHHHHhC
Confidence 9999987
No 38
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.99 E-value=1.7e-09 Score=122.35 Aligned_cols=92 Identities=16% Similarity=-0.020 Sum_probs=84.5
Q ss_pred HHHHHHHHHhch--HHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 680 EKLVQKLLKEKL--QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 680 d~lL~~alk~kl--~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
.+.|+.++..+. .+.+ +.|++.|+++|.+|..|.||||+|+..|+.++++.|++.|++++.+|..|.||||+|+..+
T Consensus 216 ~t~l~~a~~~~~~~~~iv-~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~ 294 (480)
T PHA03100 216 ETPLHIAACYNEITLEVV-NYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNN 294 (480)
T ss_pred HhHHHHHHHhCcCcHHHH-HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhC
Confidence 678888888887 6665 4889999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCc
Q 004027 758 RPNTCRSGFFHWTQR 772 (778)
Q Consensus 758 h~eiV~lLL~~~~q~ 772 (778)
+.+++++||.+....
T Consensus 295 ~~~iv~~Ll~~g~~i 309 (480)
T PHA03100 295 NKEIFKLLLNNGPSI 309 (480)
T ss_pred CHHHHHHHHhcCCCH
Confidence 999999999887643
No 39
>PHA03095 ankyrin-like protein; Provisional
Probab=98.97 E-value=2.2e-09 Score=121.07 Aligned_cols=92 Identities=20% Similarity=0.161 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhc---hHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcC-CHhHHHHHHhCCCCcccccCCCCcHHHHHH
Q 004027 679 KEKLVQKLLKEK---LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG-YDWALEPTTVAGVNINFRDVNGWTALHWAA 754 (778)
Q Consensus 679 ~d~lL~~alk~k---l~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG-~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA 754 (778)
..+.||.++..+ ..+. ++.|++.|+++|.++..|.||||+|+..| ..+++++|+++|++++.+|..|+||||+|+
T Consensus 47 g~t~Lh~a~~~~~~~~~~i-v~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~ 125 (471)
T PHA03095 47 GKTPLHLYLHYSSEKVKDI-VRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYL 125 (471)
T ss_pred CCCHHHHHHHhcCCChHHH-HHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 456777777766 4444 44788888888888888888888888888 588888888888888888888888888888
Q ss_pred --HCCCHHHHHHHHhccCC
Q 004027 755 --YCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 755 --~~Gh~eiV~lLL~~~~q 771 (778)
..++.+++++||.+...
T Consensus 126 ~~~~~~~~iv~~Ll~~gad 144 (471)
T PHA03095 126 SGFNINPKVIRLLLRKGAD 144 (471)
T ss_pred hCCcCCHHHHHHHHHcCCC
Confidence 55678888888877654
No 40
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.96 E-value=2.5e-09 Score=119.14 Aligned_cols=95 Identities=19% Similarity=0.033 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCC-cHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW-TALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~-TPLH~AA~~ 756 (778)
...+.||.|+..+..+.+. .|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|. ||||+|+..
T Consensus 134 ~g~tpLh~A~~~~~~~~v~-~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~ 212 (413)
T PHA02875 134 DKFSPLHLAVMMGDIKGIE-LLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIEN 212 (413)
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHc
Confidence 3467899999999887765 88899999999999999999999999999999999999999999998885 899999999
Q ss_pred CCHHHHHHHHhccCCcc
Q 004027 757 GRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q~~ 773 (778)
|+.++|++||.+....+
T Consensus 213 ~~~~iv~~Ll~~gad~n 229 (413)
T PHA02875 213 NKIDIVRLFIKRGADCN 229 (413)
T ss_pred CCHHHHHHHHHCCcCcc
Confidence 99999999999877644
No 41
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.96 E-value=2e-09 Score=121.90 Aligned_cols=95 Identities=18% Similarity=0.110 Sum_probs=85.8
Q ss_pred HHHHHHHHHH--HhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcC--CHhHHHHHHhCCCCcccccCCCCcHHHHH
Q 004027 678 VKEKLVQKLL--KEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG--YDWALEPTTVAGVNINFRDVNGWTALHWA 753 (778)
Q Consensus 678 ~~d~lL~~al--k~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG--~~~~Vk~LL~~GAdvn~rD~~G~TPLH~A 753 (778)
...+.|+.|+ ..+..+.+. .|++.|++++..+..|.||||+|+..| ..++++.|+++|++++.+|..|+||||+|
T Consensus 105 ~g~tpL~~A~~~~~~~~~iv~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A 183 (480)
T PHA03100 105 NGITPLLYAISKKSNSYSIVE-YLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIA 183 (480)
T ss_pred CCCchhhHHHhcccChHHHHH-HHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHH
Confidence 3466889998 777766654 889999999999999999999999999 99999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHhccCCcc
Q 004027 754 AYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 754 A~~Gh~eiV~lLL~~~~q~~ 773 (778)
+..|+.+++++|+.+....+
T Consensus 184 ~~~~~~~iv~~Ll~~ga~~~ 203 (480)
T PHA03100 184 VEKGNIDVIKFLLDNGADIN 203 (480)
T ss_pred HHhCCHHHHHHHHHcCCCcc
Confidence 99999999999998876543
No 42
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.96 E-value=3e-09 Score=93.35 Aligned_cols=83 Identities=27% Similarity=0.274 Sum_probs=70.1
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEe-CCeeeeeEEeeCCceeeecCCCCC---CcccEEEEeCCC
Q 004027 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMF-GEIEVPAEIVAGGVLRCHTSSQKV---GRVPFYVTCSNR 584 (778)
Q Consensus 509 sI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmF-Gd~eVpaei~q~GVLrC~~PpH~p---G~VpL~Vtcsnr 584 (778)
.|+.|+|.+|+..||++|+|.|.+|.... .+.|+| |+.......+.+..|.|.+|++.. |.|.|.|...+.
T Consensus 2 ~I~~i~P~~g~~~GGt~itI~G~~f~~~~-----~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (89)
T cd00102 2 VITSISPSSGPVSGGTEVTITGSNFGSGS-----NLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGNG 76 (89)
T ss_pred EEeEEECCcCCCCCCeEEEEEEECCCCCC-----cEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCCC
Confidence 69999999999999999999999998652 689999 999888777899999999999843 778777776553
Q ss_pred cccccceeeeec
Q 004027 585 LSCSEVREFEYR 596 (778)
Q Consensus 585 ~~cSEVr~FEYr 596 (778)
...+....|+|.
T Consensus 77 ~~~~~~~~F~Y~ 88 (89)
T cd00102 77 GITSSPLTFTYV 88 (89)
T ss_pred cccCCCccEEee
Confidence 456777889985
No 43
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.96 E-value=2.7e-09 Score=129.92 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcC-------------------------------
Q 004027 676 EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG------------------------------- 724 (778)
Q Consensus 676 d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG------------------------------- 724 (778)
+....+.||.|+..+..+.+ +.|++.|+++|.+|..|.||||+|+..|
T Consensus 555 d~~G~TpLh~Aa~~g~~~~v-~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g 633 (823)
T PLN03192 555 DSKGRTPLHIAASKGYEDCV-LVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRN 633 (823)
T ss_pred CCCCCCHHHHHHHcChHHHH-HHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhC
Confidence 33456789999999977665 4888999999999999999998665554
Q ss_pred CHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCcc
Q 004027 725 YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 725 ~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~~ 773 (778)
+.++++.|+++|+++|.+|.+|+||||+|+..|+.++|++||.+....+
T Consensus 634 ~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~ 682 (823)
T PLN03192 634 DLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD 682 (823)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 4556677888999999999999999999999999999999998876543
No 44
>PHA02798 ankyrin-like protein; Provisional
Probab=98.93 E-value=3.1e-09 Score=121.76 Aligned_cols=94 Identities=15% Similarity=0.030 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHh----chHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcC---CHhHHHHHHhCCCCcccccCCCCcHH
Q 004027 678 VKEKLVQKLLKE----KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG---YDWALEPTTVAGVNINFRDVNGWTAL 750 (778)
Q Consensus 678 ~~d~lL~~alk~----kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG---~~~~Vk~LL~~GAdvn~rD~~G~TPL 750 (778)
...+.|+.++.+ +...-+++.|++.|+++|.+|..|+||||+|+..| ..+++++|+++||+++.+|..|+|||
T Consensus 70 ~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL 149 (489)
T PHA02798 70 EYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTML 149 (489)
T ss_pred CCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHH
Confidence 345567766643 11234566899999999999999999999999876 67999999999999999999999999
Q ss_pred HHHHHCCC---HHHHHHHHhccCC
Q 004027 751 HWAAYCGR---PNTCRSGFFHWTQ 771 (778)
Q Consensus 751 H~AA~~Gh---~eiV~lLL~~~~q 771 (778)
|+|+..|+ .+++++||.+...
T Consensus 150 ~~a~~~~~~~~~~vv~~Ll~~gad 173 (489)
T PHA02798 150 QVYLQSNHHIDIEIIKLLLEKGVD 173 (489)
T ss_pred HHHHHcCCcchHHHHHHHHHhCCC
Confidence 99999998 9999999987653
No 45
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.91 E-value=4.7e-09 Score=120.45 Aligned_cols=74 Identities=16% Similarity=-0.046 Sum_probs=68.2
Q ss_pred HHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 699 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 699 Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
++..|+++|.+|..|+||||+||..|+.+++++||+.|++++.+|..|+||||+|+..|+.++|+.||.+....
T Consensus 242 ~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~ 315 (494)
T PHA02989 242 FILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGK 315 (494)
T ss_pred HHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCh
Confidence 34457999999999999999999999999999999999999999999999999999999999999999865433
No 46
>PHA02730 ankyrin-like protein; Provisional
Probab=98.89 E-value=3.6e-09 Score=124.63 Aligned_cols=88 Identities=7% Similarity=-0.150 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhch---HHHHHHHHHhCCCCCCccCCCCccHHHHHHHcC--CHhHHHHHHhCCC--CcccccCCCCcHHH
Q 004027 679 KEKLVQKLLKEKL---QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG--YDWALEPTTVAGV--NINFRDVNGWTALH 751 (778)
Q Consensus 679 ~d~lL~~alk~kl---~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG--~~~~Vk~LL~~GA--dvn~rD~~G~TPLH 751 (778)
+.+.||.|+.++. .+ +++.|++.|++++.+|..|.||||+||..+ +.++|++|+.+|+ +++..|.-++||||
T Consensus 41 G~TaLh~A~~~~~~~~~e-ivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~ 119 (672)
T PHA02730 41 GNNALHCYVSNKCDTDIK-IVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLY 119 (672)
T ss_pred CCcHHHHHHHcCCcCcHH-HHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHH
Confidence 4566777666652 33 344666777777777777777777777655 5677777777744 34666666777777
Q ss_pred HHHH--CCCHHHHHHHHh
Q 004027 752 WAAY--CGRPNTCRSGFF 767 (778)
Q Consensus 752 ~AA~--~Gh~eiV~lLL~ 767 (778)
.++. .++.++|++||.
T Consensus 120 ~y~~s~n~~~~~vk~Li~ 137 (672)
T PHA02730 120 SYMSSDNIDLRLLKYLIV 137 (672)
T ss_pred HHHHhcCCcHHHHHHHHH
Confidence 7776 677777777774
No 47
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.89 E-value=4.1e-09 Score=120.19 Aligned_cols=79 Identities=18% Similarity=0.111 Sum_probs=73.5
Q ss_pred HHHHHHhCCCCCCccCCC-CccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCcc
Q 004027 695 LVQKAAEGGKGPCVLDHC-GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 695 L~e~Lle~GadvN~~D~~-GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~~ 773 (778)
+++.|++.|++++..+.. |.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++||.+....+
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in 228 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD 228 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 456888999999999998 9999999999999999999999999999999999999999999999999999998765443
No 48
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.88 E-value=2.4e-09 Score=115.76 Aligned_cols=95 Identities=18% Similarity=0.136 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhC-CCCcccccCCCCcHHHHH
Q 004027 675 SEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWA 753 (778)
Q Consensus 675 ~d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~-GAdvn~rD~~G~TPLH~A 753 (778)
..+...+.|..|+..+..+.+. .|+.+|+++|.+|.+|-|+|+.||..||.++|+.||.. ++|+...|.+|.|+|.+|
T Consensus 336 AsQ~gQTALMLAVSHGr~d~vk-~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IA 414 (452)
T KOG0514|consen 336 ASQHGQTALMLAVSHGRVDMVK-ALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIA 414 (452)
T ss_pred hhhhcchhhhhhhhcCcHHHHH-HHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhH
Confidence 3456678899999999877665 89999999999999999999999999999999999987 899999999999999999
Q ss_pred HHCCCHHHHHHHHhccC
Q 004027 754 AYCGRPNTCRSGFFHWT 770 (778)
Q Consensus 754 A~~Gh~eiV~lLL~~~~ 770 (778)
-..||.||..+|..|++
T Consensus 415 leagh~eIa~mlYa~~n 431 (452)
T KOG0514|consen 415 LEAGHREIAVMLYAHMN 431 (452)
T ss_pred HhcCchHHHHHHHHHHH
Confidence 99999999999877776
No 49
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.88 E-value=5.9e-09 Score=113.05 Aligned_cols=87 Identities=13% Similarity=-0.077 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCcc-CCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVL-DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~-D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
...+.||.|+..+..+.+. .|++.|+++|.. +..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..
T Consensus 69 ~g~TpLh~Aa~~~~~eivk-lLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~ 147 (300)
T PHA02884 69 SKTNPLIYAIDCDNDDAAK-LLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMI 147 (300)
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh
Confidence 3567899999988887664 889999999986 46799999999999999999999999999999999999999999997
Q ss_pred CCHHHHHHH
Q 004027 757 GRPNTCRSG 765 (778)
Q Consensus 757 Gh~eiV~lL 765 (778)
++.+++.++
T Consensus 148 ~~~~~~~~~ 156 (300)
T PHA02884 148 CNNFLAFMI 156 (300)
T ss_pred CChhHHHHh
Confidence 766655443
No 50
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.88 E-value=9.2e-09 Score=111.33 Aligned_cols=70 Identities=21% Similarity=0.172 Sum_probs=62.6
Q ss_pred HHHhCCCCCCccC-CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhc
Q 004027 698 KAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFH 768 (778)
Q Consensus 698 ~Lle~GadvN~~D-~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~ 768 (778)
.|-.. .++|.+- ..|||+|++|...|..++|+.||.+|||||.+|.+|.|+|+.||.+||+|||++||.+
T Consensus 325 ~LF~m-gnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~ 395 (452)
T KOG0514|consen 325 RLFKM-GDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV 395 (452)
T ss_pred HHHhc-cCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhcc
Confidence 44333 3788764 5699999999999999999999999999999999999999999999999999999864
No 51
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.87 E-value=4.2e-09 Score=104.33 Aligned_cols=106 Identities=15% Similarity=0.003 Sum_probs=85.6
Q ss_pred hHHHHHHhhcccCCChhHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCc
Q 004027 660 DWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNI 739 (778)
Q Consensus 660 ~w~~Llk~~~~~~~s~d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdv 739 (778)
..+.+++.....-.+.+...=+.||.|..+++...+. .|+..|++++.+...|+||||-||.-.+.+++..||.+|+||
T Consensus 78 eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~-~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDV 156 (228)
T KOG0512|consen 78 EVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVH-ELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADV 156 (228)
T ss_pred HHHHHHHhccccccccccccccHHHHHHhcCchHHHH-HHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcc
Confidence 3444554433333333444556899999999988766 777889999999999999999999999999999999999999
Q ss_pred ccccCCCCcHHHHHHHCCCHH-HHHHHH
Q 004027 740 NFRDVNGWTALHWAAYCGRPN-TCRSGF 766 (778)
Q Consensus 740 n~rD~~G~TPLH~AA~~Gh~e-iV~lLL 766 (778)
|+....-+||||+||.+.... .+.+||
T Consensus 157 nA~t~g~ltpLhlaa~~rn~r~t~~~Ll 184 (228)
T KOG0512|consen 157 NAQTKGLLTPLHLAAGNRNSRDTLELLL 184 (228)
T ss_pred cccccccchhhHHhhcccchHHHHHHHh
Confidence 999999999999999887755 455554
No 52
>PHA02946 ankyin-like protein; Provisional
Probab=98.83 E-value=1.3e-08 Score=115.96 Aligned_cols=93 Identities=13% Similarity=-0.025 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCC--HhHHHHHHhCCCCccc-ccCCCCcHHHHH
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY--DWALEPTTVAGVNINF-RDVNGWTALHWA 753 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~--~~~Vk~LL~~GAdvn~-rD~~G~TPLH~A 753 (778)
....+.||.|++.+..+.+ +.|++.|+++|.+|..|+||||+|+..+. .+++++|+.+|++++. .|..|.|||| |
T Consensus 70 ~~G~TpLh~Aa~~g~~eiv-~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-a 147 (446)
T PHA02946 70 DDGNYPLHIASKINNNRIV-AMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-A 147 (446)
T ss_pred CCCCCHHHHHHHcCCHHHH-HHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-H
Confidence 3456789999998887765 48888999999999999999999987664 7889999999999985 6888999997 6
Q ss_pred HHCCCHHHHHHHHhccCC
Q 004027 754 AYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 754 A~~Gh~eiV~lLL~~~~q 771 (778)
|..|+.+++++|+.+...
T Consensus 148 a~~~~~~vv~~Ll~~gad 165 (446)
T PHA02946 148 CTDPSERVFKKIMSIGFE 165 (446)
T ss_pred HHCCChHHHHHHHhcccc
Confidence 677888899888876543
No 53
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.82 E-value=4.4e-09 Score=101.85 Aligned_cols=89 Identities=18% Similarity=0.102 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCC-----CCccCCCCccHHHHHHHcCCH---hHHHHHHhCCCCccccc-CCCCcH
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKG-----PCVLDHCGQGVLHFAAALGYD---WALEPTTVAGVNINFRD-VNGWTA 749 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~Gad-----vN~~D~~GqTpLHlAA~lG~~---~~Vk~LL~~GAdvn~rD-~~G~TP 749 (778)
..+.||.|+..+....+. .......+ ++..|..|+||||+||..|.. +++++|+..|++++.+| ..|+||
T Consensus 17 g~tpLh~A~~~g~~~~l~-~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~ 95 (154)
T PHA02736 17 GENILHYLCRNGGVTDLL-AFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTP 95 (154)
T ss_pred CCCHHHHHHHhCCHHHHH-HHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcH
Confidence 345788888887632221 11111111 334688999999999999986 46889999999999998 599999
Q ss_pred HHHHHHCCCHHHHHHHHhc
Q 004027 750 LHWAAYCGRPNTCRSGFFH 768 (778)
Q Consensus 750 LH~AA~~Gh~eiV~lLL~~ 768 (778)
||+|+..|+.+++++||.+
T Consensus 96 Lh~A~~~~~~~i~~~Ll~~ 114 (154)
T PHA02736 96 LHIAVYTQNYELATWLCNQ 114 (154)
T ss_pred HHHHHHhCCHHHHHHHHhC
Confidence 9999999999999999974
No 54
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.82 E-value=2.1e-08 Score=98.46 Aligned_cols=89 Identities=24% Similarity=0.188 Sum_probs=64.5
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCC-----HhHHHHHHhCCC---CcccccCCCCcHHHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY-----DWALEPTTVAGV---NINFRDVNGWTALHWA 753 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~-----~~~Vk~LL~~GA---dvn~rD~~G~TPLH~A 753 (778)
.++.++..+....+ ..++..|.+++.++..|.|+||+|+..|. .++++.||..|+ ..+.+|..|+||||||
T Consensus 76 ~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A 154 (235)
T COG0666 76 PLHSAASKGDDKIV-KLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWA 154 (235)
T ss_pred HHHHHHHcCcHHHH-HHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHH
Confidence 34444444444443 36677778888888888888888888888 788888888888 5555688888888888
Q ss_pred HHCCCHHHHHHHHhccCC
Q 004027 754 AYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 754 A~~Gh~eiV~lLL~~~~q 771 (778)
+..|+.+++++||.....
T Consensus 155 ~~~~~~~~~~~ll~~~~~ 172 (235)
T COG0666 155 ALNGDADIVELLLEAGAD 172 (235)
T ss_pred HHcCchHHHHHHHhcCCC
Confidence 888888888888776543
No 55
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.80 E-value=1.8e-08 Score=119.97 Aligned_cols=89 Identities=17% Similarity=0.178 Sum_probs=80.6
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
.+++.++..+..+.+ +.|++.|+++|.+|..|.||||+||..|+.++|++|+++|++++..+..|.||||+|+..|+.+
T Consensus 147 ~~l~~~i~~~~~~i~-k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ 225 (682)
T PHA02876 147 KLIKERIQQDELLIA-EMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNID 225 (682)
T ss_pred HHHHHHHHCCcHHHH-HHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHH
Confidence 467777777766654 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccC
Q 004027 761 TCRSGFFHWT 770 (778)
Q Consensus 761 iV~lLL~~~~ 770 (778)
+++.|+.+..
T Consensus 226 ivk~Ll~~~~ 235 (682)
T PHA02876 226 TIKAIIDNRS 235 (682)
T ss_pred HHHHHHhcCC
Confidence 9999987543
No 56
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.79 E-value=1.7e-08 Score=120.28 Aligned_cols=92 Identities=15% Similarity=0.063 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCC-HhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY-DWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~-~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
..+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..+. ..+++.|+..|+++|.+|..|+||||+|+..|
T Consensus 375 G~TpLh~Aa~~~~~~iv~-~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 375 DKTPIHYAAVRNNVVIIN-TLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence 345666666666555443 5666666666666666777777665444 34566677777777777777777777777655
Q ss_pred -CHHHHHHHHhccCC
Q 004027 758 -RPNTCRSGFFHWTQ 771 (778)
Q Consensus 758 -h~eiV~lLL~~~~q 771 (778)
+.+++++||.+...
T Consensus 454 ~~~~iv~lLl~~Gad 468 (682)
T PHA02876 454 CKLDVIEMLLDNGAD 468 (682)
T ss_pred CcHHHHHHHHHCCCC
Confidence 46677777666544
No 57
>PHA02798 ankyrin-like protein; Provisional
Probab=98.79 E-value=1.7e-08 Score=115.79 Aligned_cols=74 Identities=16% Similarity=-0.048 Sum_probs=68.2
Q ss_pred HHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 699 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 699 Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
++..++++|.+|..|+||||+||..|+.+++++||+.||+++.+|..|+||||+|+..|+.++++.||.+....
T Consensus 244 ~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~ 317 (489)
T PHA02798 244 FIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNK 317 (489)
T ss_pred HHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCH
Confidence 34456999999999999999999999999999999999999999999999999999999999999999876443
No 58
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.79 E-value=9e-09 Score=125.98 Aligned_cols=92 Identities=21% Similarity=0.096 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.||.|+..+....+. .|++.|++++.+++.|+||||.||..|+.+++.+|+++||++|..|.+|.||||.|++.|+
T Consensus 540 ~~TpLh~A~~~g~v~~Vk-fLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~ 618 (1143)
T KOG4177|consen 540 GYTPLHVAVHYGNVDLVK-FLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGY 618 (1143)
T ss_pred ccchHHHHHhcCCchHHH-HhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcc
Confidence 346899999999877654 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++++|+.....
T Consensus 619 ~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 619 LSVVKLLKVVTAT 631 (1143)
T ss_pred cchhhHHHhccCc
Confidence 9999998766543
No 59
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.79 E-value=2.6e-08 Score=112.31 Aligned_cols=90 Identities=12% Similarity=-0.107 Sum_probs=81.4
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
.|..|+..+..+.+...+...+..++..+..|.||||.|+..|+.++|++|++.|++++.++..|.||||+|+..|+.++
T Consensus 4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~i 83 (434)
T PHA02874 4 DLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDI 83 (434)
T ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 57778889999988755556677788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCC
Q 004027 762 CRSGFFHWTQ 771 (778)
Q Consensus 762 V~lLL~~~~q 771 (778)
|++|+.+...
T Consensus 84 v~~Ll~~g~~ 93 (434)
T PHA02874 84 IKLLIDNGVD 93 (434)
T ss_pred HHHHHHCCCC
Confidence 9999987654
No 60
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.78 E-value=1.5e-08 Score=121.24 Aligned_cols=90 Identities=11% Similarity=0.025 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHh--chHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCC--HhHHHHHHhCCCCcccccCCCCcHHHHH
Q 004027 678 VKEKLVQKLLKE--KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY--DWALEPTTVAGVNINFRDVNGWTALHWA 753 (778)
Q Consensus 678 ~~d~lL~~alk~--kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~--~~~Vk~LL~~GAdvn~rD~~G~TPLH~A 753 (778)
.+.+.||.++.. +..+ +++.|++.|+++|.+|..|.||||+||..|+ .++|++||++||++|.+|..|+||||+|
T Consensus 176 ~G~TpLH~A~~n~~~~~e-IVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~A 254 (764)
T PHA02716 176 TGYGILHAYLGNMYVDID-ILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTY 254 (764)
T ss_pred CCCcHHHHHHHhccCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 355678876543 2233 4568889999999999999999999999995 4899999999999999999999999987
Q ss_pred H---HCCCHHHHHHHHhc
Q 004027 754 A---YCGRPNTCRSGFFH 768 (778)
Q Consensus 754 A---~~Gh~eiV~lLL~~ 768 (778)
+ ..++.+++++|+..
T Consensus 255 i~~a~n~~~EIvkiLie~ 272 (764)
T PHA02716 255 IINIDNINPEITNIYIES 272 (764)
T ss_pred HHhhhccCHHHHHHHHHh
Confidence 4 34555666655543
No 61
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.78 E-value=6.6e-09 Score=115.30 Aligned_cols=91 Identities=13% Similarity=-0.022 Sum_probs=84.3
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
.|..|...++.+.+. .|+..|+++|......-|||-.||..|+.++|++|+++|+|++..|++|.|.||+||++||.+|
T Consensus 87 pLWaAsaAGHl~vVk-~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I 165 (615)
T KOG0508|consen 87 PLWAASAAGHLEVVK-LLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDI 165 (615)
T ss_pred hhhHHhccCcHHHHH-HHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHH
Confidence 577788888888765 8889999999888888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCcc
Q 004027 762 CRSGFFHWTQRN 773 (778)
Q Consensus 762 V~lLL~~~~q~~ 773 (778)
+++||+...+.+
T Consensus 166 ~qyLle~gADvn 177 (615)
T KOG0508|consen 166 AQYLLEQGADVN 177 (615)
T ss_pred HHHHHHhCCCcc
Confidence 999999988876
No 62
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.77 E-value=1.1e-08 Score=119.55 Aligned_cols=96 Identities=22% Similarity=0.087 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCC-CCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcc---cccCCCCcHHHH
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGG-KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNIN---FRDVNGWTALHW 752 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~G-advN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn---~rD~~G~TPLH~ 752 (778)
..+..+||.|+.-+....+.++|.+.+ ...|..|..|+||||+|+..||.++++.||..||+.. .+|.+|.||||+
T Consensus 304 ~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~ 383 (929)
T KOG0510|consen 304 KDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHL 383 (929)
T ss_pred CCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhH
Confidence 345668999999988888875555344 3578899999999999999999999999999999877 569999999999
Q ss_pred HHHCCCHHHHHHHHhccCCc
Q 004027 753 AAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 753 AA~~Gh~eiV~lLL~~~~q~ 772 (778)
||..|+..+|++|+.+.+.-
T Consensus 384 Aa~~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 384 AAKYGNTSAVQKLISHGADI 403 (929)
T ss_pred HHHhccHHHHHHHHHcCCce
Confidence 99999999999999988753
No 63
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.76 E-value=2.4e-08 Score=114.63 Aligned_cols=75 Identities=12% Similarity=0.027 Sum_probs=44.9
Q ss_pred HHHHHhCCCCCCccCCCCccHHHHHHHc---CCHhHHHHHHhCCCCc-ccccCCCCcHHHHHHHC--CCHHHHHHHHhcc
Q 004027 696 VQKAAEGGKGPCVLDHCGQGVLHFAAAL---GYDWALEPTTVAGVNI-NFRDVNGWTALHWAAYC--GRPNTCRSGFFHW 769 (778)
Q Consensus 696 ~e~Lle~GadvN~~D~~GqTpLHlAA~l---G~~~~Vk~LL~~GAdv-n~rD~~G~TPLH~AA~~--Gh~eiV~lLL~~~ 769 (778)
++.|++.|+++|.+|..|.||||.|+.. |..+++++|+++||++ +.+|..|+||||+|+.. ++.++|++||++.
T Consensus 91 v~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~G 170 (494)
T PHA02989 91 VKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFG 170 (494)
T ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcC
Confidence 3455666666666666666666655433 4556666666666666 56666666666665532 4566666666555
Q ss_pred C
Q 004027 770 T 770 (778)
Q Consensus 770 ~ 770 (778)
.
T Consensus 171 a 171 (494)
T PHA02989 171 V 171 (494)
T ss_pred C
Confidence 4
No 64
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.76 E-value=3.4e-08 Score=118.36 Aligned_cols=87 Identities=16% Similarity=-0.059 Sum_probs=75.0
Q ss_pred HHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHH--cCCHhHHHHHHhCCCCcccccCCCCcHHHHHHH-------
Q 004027 685 KLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAA--LGYDWALEPTTVAGVNINFRDVNGWTALHWAAY------- 755 (778)
Q Consensus 685 ~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~--lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~------- 755 (778)
.+++.+..+.+ +.|++.|++++.+|..|+||||+|+. .++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 290 ~AA~~g~leiV-klLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ 368 (764)
T PHA02716 290 TLARNIDISVV-YSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNI 368 (764)
T ss_pred HHHHcCCHHHH-HHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhcc
Confidence 45666766665 48889999999999999999999875 457899999999999999999999999999875
Q ss_pred -------CCCHHHHHHHHhccCCc
Q 004027 756 -------CGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 756 -------~Gh~eiV~lLL~~~~q~ 772 (778)
.++.++|++||.+....
T Consensus 369 ld~~~~~~~~~eVVklLL~~GADI 392 (764)
T PHA02716 369 LDPETDNDIRLDVIQCLISLGADI 392 (764)
T ss_pred ccccccccChHHHHHHHHHCCCCC
Confidence 37899999999987654
No 65
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.75 E-value=2e-08 Score=117.33 Aligned_cols=92 Identities=18% Similarity=0.069 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHh-CCC-CcccccCCCCcHHHHHHH
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-AGV-NINFRDVNGWTALHWAAY 755 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~-~GA-dvn~rD~~G~TPLH~AA~ 755 (778)
...++||.++++|..+.+. .|+..|++++.++.++.||||.||..|....|+-||+ .|. .+|..|-.|.||||.|+.
T Consensus 272 dg~tpLH~a~r~G~~~svd-~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~ 350 (929)
T KOG0510|consen 272 DGCTPLHYAARQGGPESVD-NLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAK 350 (929)
T ss_pred cCCchHHHHHHcCChhHHH-HHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhh
Confidence 4567999999999988875 8999999999999999999999999999999999998 543 688899999999999999
Q ss_pred CCCHHHHHHHHhccC
Q 004027 756 CGRPNTCRSGFFHWT 770 (778)
Q Consensus 756 ~Gh~eiV~lLL~~~~ 770 (778)
.||.+|+++||.+..
T Consensus 351 ~gH~~v~qlLl~~GA 365 (929)
T KOG0510|consen 351 SGHDRVVQLLLNKGA 365 (929)
T ss_pred cCHHHHHHHHHhcCh
Confidence 999999999998754
No 66
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.75 E-value=6.3e-09 Score=106.28 Aligned_cols=91 Identities=21% Similarity=0.117 Sum_probs=67.7
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
+.|..|...+.... ++.|+..|++++...+...++|.+|+..||..+|++||.+++|+|.-|-+|-|||-+|++.||.+
T Consensus 162 TpLiWAaa~G~i~v-V~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvk 240 (296)
T KOG0502|consen 162 TPLIWAAAKGHIPV-VQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVK 240 (296)
T ss_pred hHhHHHHhcCchHH-HHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHH
Confidence 34444445554444 44777888888877777788888888888888888888888888888888888888888888888
Q ss_pred HHHHHHhccCCc
Q 004027 761 TCRSGFFHWTQR 772 (778)
Q Consensus 761 iV~lLL~~~~q~ 772 (778)
||+.||......
T Consensus 241 cve~Ll~sGAd~ 252 (296)
T KOG0502|consen 241 CVESLLNSGADV 252 (296)
T ss_pred HHHHHHhcCCCc
Confidence 888888776544
No 67
>PHA02917 ankyrin-like protein; Provisional
Probab=98.74 E-value=3.1e-08 Score=117.94 Aligned_cols=79 Identities=18% Similarity=0.162 Sum_probs=72.8
Q ss_pred HHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHH-CCCHHHHHHHHhccCCcc
Q 004027 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY-CGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 695 L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~-~Gh~eiV~lLL~~~~q~~ 773 (778)
+++.|+..|+++|.+|..|+||||+|+..+..+++++|+.+|++++.+|..|+||||+|+. .++.+++++||.+...-+
T Consensus 434 ~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~ 513 (661)
T PHA02917 434 TINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTLD 513 (661)
T ss_pred HHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCChh
Confidence 3468899999999999999999999999999999999999999999999999999999996 789999999998876443
No 68
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.69 E-value=1.2e-07 Score=84.87 Aligned_cols=89 Identities=24% Similarity=0.169 Sum_probs=68.3
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.+.|+.+++.+..+.+. .+++.+.+.+..+..|.|+||+|+..+..++++.|+..|++++..+..|.||+|+|+..++.
T Consensus 8 ~t~l~~a~~~~~~~~i~-~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~ 86 (126)
T cd00204 8 RTPLHLAASNGHLEVVK-LLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNL 86 (126)
T ss_pred CCHHHHHHHcCcHHHHH-HHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcH
Confidence 34677777777665544 67777777777778888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHhcc
Q 004027 760 NTCRSGFFHW 769 (778)
Q Consensus 760 eiV~lLL~~~ 769 (778)
+++++|+.+.
T Consensus 87 ~~~~~L~~~~ 96 (126)
T cd00204 87 DVVKLLLKHG 96 (126)
T ss_pred HHHHHHHHcC
Confidence 8888877753
No 69
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.68 E-value=9.1e-08 Score=84.97 Aligned_cols=85 Identities=22% Similarity=0.235 Sum_probs=67.1
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCC-CCCcccEEEEeCCCc-
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRL- 585 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH-~pG~VpL~Vtcsnr~- 585 (778)
..|+.|+|..|+..|||.|+|.|.+|.... ....|.||+.+.....+.+..+.|.+|+. .+|..++.|..++..
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~~----~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSGS----PRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANV 76 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCCC----ceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCccc
Confidence 379999999999999999999999998753 46899999997777777899999999997 443455555555543
Q ss_pred --ccccceeeeec
Q 004027 586 --SCSEVREFEYR 596 (778)
Q Consensus 586 --~cSEVr~FEYr 596 (778)
..+....|+|.
T Consensus 77 ~~~~~~~~~F~Y~ 89 (90)
T cd00603 77 SARVLSNTTFTYV 89 (90)
T ss_pred cccccCCcceEEe
Confidence 34556678874
No 70
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.65 E-value=3e-08 Score=111.82 Aligned_cols=89 Identities=25% Similarity=0.217 Sum_probs=81.3
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
.+..++..+.++-+. .++..|+++|..+.+|.|+||-||...+..+|++|+++|++||..|..||||||-|+.|||..+
T Consensus 43 ~~l~A~~~~d~~ev~-~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i 121 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVR-KLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI 121 (527)
T ss_pred HHHhccccccHHHHH-HHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence 466677777777765 7888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCC
Q 004027 762 CRSGFFHWTQ 771 (778)
Q Consensus 762 V~lLL~~~~q 771 (778)
|.+|+.+..-
T Consensus 122 ~~~li~~gA~ 131 (527)
T KOG0505|consen 122 VEYLIQHGAN 131 (527)
T ss_pred HHHHHHhhhh
Confidence 9999988653
No 71
>PHA02795 ankyrin-like protein; Provisional
Probab=98.65 E-value=7.1e-08 Score=109.13 Aligned_cols=93 Identities=13% Similarity=-0.113 Sum_probs=77.7
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCC-cc-----CCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPC-VL-----DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN-~~-----D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~A 753 (778)
.+.++.++..+..+.+ +.|+..|++.+ .. +..|.|++|.|+..++.+++++|+.+||++|.+|..|+||||+|
T Consensus 150 ~t~lh~A~~~~~~eIV-k~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~A 228 (437)
T PHA02795 150 LNAYFRGICKKESSVV-EFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRA 228 (437)
T ss_pred CCHHHHHHHcCcHHHH-HHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHH
Confidence 3578888877766655 48888887432 22 13478999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHhccCCcc
Q 004027 754 AYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 754 A~~Gh~eiV~lLL~~~~q~~ 773 (778)
+..|+.++|++||.+....+
T Consensus 229 a~~g~~eiVelLL~~GAdIN 248 (437)
T PHA02795 229 IYAGYIDLVSWLLENGANVN 248 (437)
T ss_pred HHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999886544
No 72
>PHA02917 ankyrin-like protein; Provisional
Probab=98.64 E-value=7.7e-08 Score=114.63 Aligned_cols=89 Identities=15% Similarity=0.088 Sum_probs=72.7
Q ss_pred HHHHHHHHHH--HhchHHHHHHHHHhCCCCCCccCC---CC-----------ccHHHHHHH-----------cCCHhHHH
Q 004027 678 VKEKLVQKLL--KEKLQVWLVQKAAEGGKGPCVLDH---CG-----------QGVLHFAAA-----------LGYDWALE 730 (778)
Q Consensus 678 ~~d~lL~~al--k~kl~e~L~e~Lle~GadvN~~D~---~G-----------qTpLHlAA~-----------lG~~~~Vk 730 (778)
...+.|+.++ .++..+.+ +.|++.|+++|..|. .| .||||+|+. .++.++|+
T Consensus 135 ~g~T~L~~~~a~~~~~~eiv-klLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~ 213 (661)
T PHA02917 135 NHRSVIENYVMTDDPVPEII-DLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVK 213 (661)
T ss_pred CCccHHHHHHHccCCCHHHH-HHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHH
Confidence 3456777543 45566655 589999999986653 34 599999986 46899999
Q ss_pred HHHhCCCCcccccCCCCcHHHHHHHCCCH--HHHHHHHh
Q 004027 731 PTTVAGVNINFRDVNGWTALHWAAYCGRP--NTCRSGFF 767 (778)
Q Consensus 731 ~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~--eiV~lLL~ 767 (778)
+|+.+||++|.+|.+|+||||+|+..|+. ++|++|+.
T Consensus 214 ~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 214 CLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK 252 (661)
T ss_pred HHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence 99999999999999999999999999995 79999976
No 73
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.62 E-value=1.3e-07 Score=85.77 Aligned_cols=87 Identities=16% Similarity=0.213 Sum_probs=69.3
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeee---EEeeCCceeeecCCCC-C-CcccEEEEeCC
Q 004027 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPA---EIVAGGVLRCHTSSQK-V-GRVPFYVTCSN 583 (778)
Q Consensus 509 sI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpa---ei~q~GVLrC~~PpH~-p-G~VpL~Vtcsn 583 (778)
.|+.|.|..||..|||+|+|.|.+|..+.+ .....|++|+.+-.. .......|+|.+||+. + +.++|.|..++
T Consensus 2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~~ 79 (94)
T cd01180 2 VITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVGH 79 (94)
T ss_pred eeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEECC
Confidence 699999999999999999999999987642 346789999993332 2567789999999984 3 78888888877
Q ss_pred Cc-ccccceeeeecc
Q 004027 584 RL-SCSEVREFEYRA 597 (778)
Q Consensus 584 r~-~cSEVr~FEYr~ 597 (778)
+. .++....|+|.+
T Consensus 80 ~~~~~~~~~~F~Y~~ 94 (94)
T cd01180 80 GSFRTESSEGFSFVD 94 (94)
T ss_pred ceecccccCceEEeC
Confidence 64 456667888853
No 74
>PHA02730 ankyrin-like protein; Provisional
Probab=98.61 E-value=7.6e-08 Score=113.68 Aligned_cols=79 Identities=10% Similarity=-0.020 Sum_probs=72.3
Q ss_pred HHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccC-CCCcHHHHHHH--CCCHHHHHHHHhccCC
Q 004027 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALHWAAY--CGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 695 L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~-~G~TPLH~AA~--~Gh~eiV~lLL~~~~q 771 (778)
+.+.|+..|+++|.+|..|+||||+|+..++.+++++|+.+||++|.+|. .|+||||+|+. .|+.+++++||.+...
T Consensus 444 ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~ 523 (672)
T PHA02730 444 VFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPT 523 (672)
T ss_pred HHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCC
Confidence 45688999999999999999999999999999999999999999999997 59999999998 4899999999988764
Q ss_pred cc
Q 004027 772 RN 773 (778)
Q Consensus 772 ~~ 773 (778)
-.
T Consensus 524 i~ 525 (672)
T PHA02730 524 LE 525 (672)
T ss_pred HH
Confidence 43
No 75
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.61 E-value=1.1e-07 Score=107.39 Aligned_cols=70 Identities=33% Similarity=0.431 Sum_probs=66.2
Q ss_pred CCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 702 GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 702 ~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
.|...+..+..|.|+||.|+++||.++.++||.+|.+++.+|.+||||||.||..|+.+++++|+.+.++
T Consensus 187 ~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~ 256 (527)
T KOG0505|consen 187 AGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGAD 256 (527)
T ss_pred ccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcc
Confidence 6788888888899999999999999999999999999999999999999999999999999999888765
No 76
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.60 E-value=1.1e-07 Score=93.52 Aligned_cols=92 Identities=24% Similarity=0.105 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHhch-----HHHHHHHHHhCCC---CCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCC
Q 004027 676 EEVKEKLVQKLLKEKL-----QVWLVQKAAEGGK---GPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW 747 (778)
Q Consensus 676 d~~~d~lL~~alk~kl-----~e~L~e~Lle~Ga---dvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~ 747 (778)
+....+.++.++..+. .+.+ +.+++.|+ ..+..|..|+||||+|+..|+..+++.|+..|++++.++..|.
T Consensus 103 ~~~g~t~l~~a~~~~~~~~~~~~~~-~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~ 181 (235)
T COG0666 103 DADGDTPLHLAALNGNPPEGNIEVA-KLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGV 181 (235)
T ss_pred cCCCCcHHHHHHhcCCcccchHHHH-HHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCC
Confidence 3445678899998887 6655 48888888 5666799999999999999999999999999999999999999
Q ss_pred cHHHHHHHCCCHHHHHHHHhc
Q 004027 748 TALHWAAYCGRPNTCRSGFFH 768 (778)
Q Consensus 748 TPLH~AA~~Gh~eiV~lLL~~ 768 (778)
|||++|+..|+.+++..|+.+
T Consensus 182 t~l~~a~~~~~~~~~~~l~~~ 202 (235)
T COG0666 182 TALDPAAKNGRIELVKLLLDK 202 (235)
T ss_pred cchhhhcccchHHHHHHHHhc
Confidence 999999999999999999875
No 77
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.59 E-value=1.1e-07 Score=100.56 Aligned_cols=115 Identities=19% Similarity=0.063 Sum_probs=82.2
Q ss_pred cCCCchHHHHHHhhcccCCChhHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCc-cCCCCccHHHHHHHcCCHhHHHHHH
Q 004027 655 KDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCV-LDHCGQGVLHFAAALGYDWALEPTT 733 (778)
Q Consensus 655 k~Dd~~w~~Llk~~~~~~~s~d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~-~D~~GqTpLHlAA~lG~~~~Vk~LL 733 (778)
++|......|++....-....+..-..+.|.+.+.+ .+. ++++++.|+|+|. ++..+.||||+||..|+.++.+.|+
T Consensus 22 Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGn-l~~-v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrlll 99 (396)
T KOG1710|consen 22 KNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGN-LTL-VELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLL 99 (396)
T ss_pred cCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCc-HHH-HHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHH
Confidence 455566666766544222211222233445555444 444 4588888999886 4567889999999999999999999
Q ss_pred hCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 734 VAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 734 ~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
++|+.+...+.-|+||-.+||.-||.+||..+=.++++
T Consensus 100 daGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~t~ 137 (396)
T KOG1710|consen 100 DAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNHITI 137 (396)
T ss_pred hccCccccccchhhhHHHHHHHhcchHHHHHHhccccH
Confidence 99999888888999999999999999999887666554
No 78
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.59 E-value=1.9e-07 Score=82.78 Aligned_cols=83 Identities=25% Similarity=0.264 Sum_probs=67.4
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEe--eCCceeeecCCC--CCCcccE-EEEeC
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIV--AGGVLRCHTSSQ--KVGRVPF-YVTCS 582 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~--q~GVLrC~~PpH--~pG~VpL-~Vtcs 582 (778)
..|+.|+|.+|+..|||+|+|+|.+|... ....|.|+...+++.++ .+..|+|.+|+. .++.+++ .+...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~~-----~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDSI-----SVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCcc-----eEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 47999999999999999999999999875 45788888767777775 578999999986 5788888 77776
Q ss_pred CCcccccceeeee
Q 004027 583 NRLSCSEVREFEY 595 (778)
Q Consensus 583 nr~~cSEVr~FEY 595 (778)
+...-++...|+|
T Consensus 77 ~~~~~~~~~~f~y 89 (90)
T smart00429 77 NGGVPSSPQPFTY 89 (90)
T ss_pred CCCccCcccCeEE
Confidence 6654454456777
No 79
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.57 E-value=7.3e-08 Score=101.69 Aligned_cols=72 Identities=25% Similarity=0.184 Sum_probs=66.6
Q ss_pred CCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCcc
Q 004027 702 GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 702 ~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~~ 773 (778)
..-+.|.-|..|.+||||||..|+..+++.||.+|+.+|..+.-.-||||+||..||.+||..||++-...|
T Consensus 23 tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvn 94 (448)
T KOG0195|consen 23 TEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVN 94 (448)
T ss_pred cccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccc
Confidence 345788899999999999999999999999999999999999999999999999999999999998776655
No 80
>PHA02792 ankyrin-like protein; Provisional
Probab=98.54 E-value=1.8e-07 Score=109.61 Aligned_cols=77 Identities=12% Similarity=-0.023 Sum_probs=53.1
Q ss_pred HHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHH--C--------CCHHHHHHH
Q 004027 696 VQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY--C--------GRPNTCRSG 765 (778)
Q Consensus 696 ~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~--~--------Gh~eiV~lL 765 (778)
.+.++..|+++|.+|..|.||||+|+..+..+++++|+.+|++++.+|..|.||||+|+. . .+.+++++|
T Consensus 393 lklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lL 472 (631)
T PHA02792 393 LKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEII 472 (631)
T ss_pred HHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 445667777777777777777777777777777777777777777777777777777764 1 124556666
Q ss_pred HhccCCc
Q 004027 766 FFHWTQR 772 (778)
Q Consensus 766 L~~~~q~ 772 (778)
|++....
T Consensus 473 Ls~~p~i 479 (631)
T PHA02792 473 LSKLPTI 479 (631)
T ss_pred HhcCCCh
Confidence 6665433
No 81
>PHA02792 ankyrin-like protein; Provisional
Probab=98.54 E-value=2.2e-07 Score=108.90 Aligned_cols=90 Identities=11% Similarity=-0.102 Sum_probs=75.4
Q ss_pred HHHHHHhchHHHHHHHHHhCCCCCCccCCCC--ccHHHHHHHcCCH---hHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCG--QGVLHFAAALGYD---WALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 683 L~~alk~kl~e~L~e~Lle~GadvN~~D~~G--qTpLHlAA~lG~~---~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
++.++.++..+.+ +.|++.|++++.+|..| .||||+|+..... .++++|+.+||++|.+|..|+||||+|+..+
T Consensus 343 ~~~Aa~~gn~eIV-elLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~ 421 (631)
T PHA02792 343 YFQKFDNRDPKVV-EYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESH 421 (631)
T ss_pred HHHHHHcCCHHHH-HHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcC
Confidence 5566667766655 58999999999988775 6999987766554 4678899999999999999999999999999
Q ss_pred CHHHHHHHHhccCCcc
Q 004027 758 RPNTCRSGFFHWTQRN 773 (778)
Q Consensus 758 h~eiV~lLL~~~~q~~ 773 (778)
+.+++++|+.+....+
T Consensus 422 n~eivelLLs~GADIN 437 (631)
T PHA02792 422 SVSLVEWLIDNGADIN 437 (631)
T ss_pred CHHHHHHHHHCCCCCC
Confidence 9999999999876543
No 82
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.47 E-value=2.8e-07 Score=80.74 Aligned_cols=64 Identities=19% Similarity=0.162 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCccccc
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD 743 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD 743 (778)
.++.|+.|+..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 26 ~~~~l~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVK-LLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp SSBHHHHHHHTTTHHHHH-HHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 345899999999877765 8999999999999999999999999999999999999999999886
No 83
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.46 E-value=5.4e-07 Score=95.35 Aligned_cols=92 Identities=23% Similarity=0.175 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCccc-ccCCCCcHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINF-RDVNGWTALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~-rD~~G~TPLH~AA~~ 756 (778)
....+|+..-++...... .|+..--.+|.+|..|+++|..||..|+.++|+.||+.|||+|. ++..++||||+||..
T Consensus 12 ~~~~Lle~i~Kndt~~a~--~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS 89 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAAL--ALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS 89 (396)
T ss_pred hhhHHHHHHccCcHHHHH--HHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence 345566665555544433 34444445999999999999999999999999999999999997 588999999999999
Q ss_pred CCHHHHHHHHhccCC
Q 004027 757 GRPNTCRSGFFHWTQ 771 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q 771 (778)
|+.++.++||.....
T Consensus 90 Gn~dvcrllldaGa~ 104 (396)
T KOG1710|consen 90 GNQDVCRLLLDAGAR 104 (396)
T ss_pred CCchHHHHHHhccCc
Confidence 999999999987654
No 84
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.44 E-value=6.9e-07 Score=99.82 Aligned_cols=93 Identities=17% Similarity=0.101 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccC-CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHH
Q 004027 676 EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754 (778)
Q Consensus 676 d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D-~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA 754 (778)
++.....||..++.+..+... +|+..|+++|..+ +.|.||||+||..|..--+++|+-.|||+++.|.+|.||+.+|-
T Consensus 130 ~~~LsrQLhasvRt~nlet~L-Rll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR 208 (669)
T KOG0818|consen 130 AKDLSKQLHSSVRTGNLETCL-RLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYAR 208 (669)
T ss_pred HHHHHHHHHHHhhcccHHHHH-HHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHH
Confidence 344456788899999888877 7888999999866 57999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHhcc
Q 004027 755 YCGRPNTCRSGFFHW 769 (778)
Q Consensus 755 ~~Gh~eiV~lLL~~~ 769 (778)
..||-+++..|++-+
T Consensus 209 ~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 209 QGGHHELAERLVEIQ 223 (669)
T ss_pred hcCchHHHHHHHHHH
Confidence 999999998886543
No 85
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.43 E-value=1.6e-06 Score=77.71 Aligned_cols=87 Identities=24% Similarity=0.194 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
....++.++..+..+.+ +.++..++.++..+..|.||+|+|+..+...+++.|+..|.+++..|..|.|||++|...++
T Consensus 40 g~~~l~~a~~~~~~~~~-~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 118 (126)
T cd00204 40 GRTPLHLAAKNGHLEIV-KLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGH 118 (126)
T ss_pred CCcHHHHHHHcCCHHHH-HHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCC
Confidence 44577888877776554 48888888888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 004027 759 PNTCRSGF 766 (778)
Q Consensus 759 ~eiV~lLL 766 (778)
.+++++|+
T Consensus 119 ~~~~~~Ll 126 (126)
T cd00204 119 LEVVKLLL 126 (126)
T ss_pred HHHHHHhC
Confidence 99999875
No 86
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.41 E-value=9.7e-07 Score=106.44 Aligned_cols=95 Identities=17% Similarity=0.044 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHh--chHHHHHHHHHhCCCC------CC----ccCCCCccHHHHHHHcCCHhHHHHHHhCCCCccccc-
Q 004027 677 EVKEKLVQKLLKE--KLQVWLVQKAAEGGKG------PC----VLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD- 743 (778)
Q Consensus 677 ~~~d~lL~~alk~--kl~e~L~e~Lle~Gad------vN----~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD- 743 (778)
...+++||.++++ ...+.+...+...+.+ ++ .....|.||||+||..|+.++|+.|+++||+++.++
T Consensus 80 ~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~ 159 (743)
T TIGR00870 80 AVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARAC 159 (743)
T ss_pred CcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcC
Confidence 3467899999873 3333444344443322 11 123569999999999999999999999999999764
Q ss_pred -------------CCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 744 -------------VNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 744 -------------~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
.+|.||||+|+..|+.+++++|+.+.+.
T Consensus 160 ~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad 200 (743)
T TIGR00870 160 GDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD 200 (743)
T ss_pred CchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc
Confidence 3699999999999999999999987743
No 87
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.39 E-value=2e-07 Score=108.57 Aligned_cols=84 Identities=13% Similarity=-0.069 Sum_probs=39.9
Q ss_pred HHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHH
Q 004027 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTC 762 (778)
Q Consensus 683 L~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV 762 (778)
||.+..++.++.+. +++..+..+|.....|.||||+||..|+.+++.+||.+|+|+-.+|..+.|+|..|+++|+.++|
T Consensus 86 lhlaaw~g~~e~vk-mll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vv 164 (854)
T KOG0507|consen 86 LHLAAWNGNLEIVK-MLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVV 164 (854)
T ss_pred EEehhhcCcchHHH-HHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHH
Confidence 44444444444443 33333334444444455555555555555555555555555555555555555555555555555
Q ss_pred HHHHh
Q 004027 763 RSGFF 767 (778)
Q Consensus 763 ~lLL~ 767 (778)
++||.
T Consensus 165 q~ll~ 169 (854)
T KOG0507|consen 165 QMLLQ 169 (854)
T ss_pred HHHhh
Confidence 54443
No 88
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.38 E-value=5.3e-07 Score=108.71 Aligned_cols=92 Identities=15% Similarity=0.002 Sum_probs=77.3
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccC--------------CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLD--------------HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV 744 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D--------------~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~ 744 (778)
..+.||.|+..+..+.+. .|++.|++++.++ ..|.||||+|+..|+.+++++|++.|++++.+|.
T Consensus 128 G~TpLhlAa~~~~~eiVk-lLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~ 206 (743)
T TIGR00870 128 GITALHLAAHRQNYEIVK-LLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADS 206 (743)
T ss_pred CCcHHHHHHHhCCHHHHH-HHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhh
Confidence 456899999999888765 8899999998653 3599999999999999999999999999999999
Q ss_pred CCCcHHHHHHHCC---------CHHHHHHHHhccCC
Q 004027 745 NGWTALHWAAYCG---------RPNTCRSGFFHWTQ 771 (778)
Q Consensus 745 ~G~TPLH~AA~~G---------h~eiV~lLL~~~~q 771 (778)
.|+||||+|+..+ ...|.++++....+
T Consensus 207 ~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 207 LGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred hhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999987 33456666655443
No 89
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.36 E-value=3.3e-07 Score=101.96 Aligned_cols=89 Identities=21% Similarity=-0.050 Sum_probs=79.3
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhC-CCCcccccCCCCcHHHHHHHCCCHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~-GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
.+..+.+.+....+. ++.-.|.|++.+|.+.+|+||.||+.|+.+++++||.. +++++.+|..|+|||.-|..++|.+
T Consensus 509 ~~~~aa~~GD~~alr-Rf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~ 587 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALR-RFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKE 587 (622)
T ss_pred hhhhhhhcCCHHHHH-HHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHH
Confidence 456677888888887 55556889999999999999999999999999999986 9999999999999999999999999
Q ss_pred HHHHHHhccCC
Q 004027 761 TCRSGFFHWTQ 771 (778)
Q Consensus 761 iV~lLL~~~~q 771 (778)
++++|-....+
T Consensus 588 v~k~L~~~~~~ 598 (622)
T KOG0506|consen 588 VVKLLEEAQYP 598 (622)
T ss_pred HHHHHHHHhcc
Confidence 99998766553
No 90
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.31 E-value=2e-06 Score=78.98 Aligned_cols=74 Identities=19% Similarity=0.403 Sum_probs=60.0
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe-eeeeEEeeCCceeeecCCCC-------CCcccEEE
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-EVPAEIVAGGVLRCHTSSQK-------VGRVPFYV 579 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei~q~GVLrC~~PpH~-------pG~VpL~V 579 (778)
.+|++|.|.|+|.+|||.|+|+|.+|...+. -.+.++||+. .++..+..+..++|.+|+.. ++..++.+
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds~q~---p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~ 77 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNTVQE---PRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEF 77 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCcccc---cEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEE
Confidence 3799999999999999999999999988743 4799999996 34666778889999999873 36677777
Q ss_pred EeCCC
Q 004027 580 TCSNR 584 (778)
Q Consensus 580 tcsnr 584 (778)
..++.
T Consensus 78 ~fd~~ 82 (99)
T cd01181 78 GLDGD 82 (99)
T ss_pred EEecc
Confidence 66543
No 91
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.28 E-value=4.1e-06 Score=74.28 Aligned_cols=79 Identities=16% Similarity=0.100 Sum_probs=67.1
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCCCCCcccEEEEeCCCccc
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSC 587 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH~pG~VpL~Vtcsnr~~c 587 (778)
..|..++|.-|.. |++|+|.|++|... .-.|+||+.+++...|++..+.|.+|.+.||.+.+.|...++..
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~~- 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGSA------PGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGAT- 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCCC------CcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCcc-
Confidence 4799999999987 88999999999852 24699999999999999999999999999999999999765543
Q ss_pred ccceeeee
Q 004027 588 SEVREFEY 595 (778)
Q Consensus 588 SEVr~FEY 595 (778)
|....|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 55555664
No 92
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.26 E-value=8.6e-07 Score=90.96 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
..++..|..|+..+..+. +++|+.++.++|..|-.|-|||-+|+..||.++|+.||..||+++.-|..|++++..|++.
T Consensus 191 k~resALsLAt~ggytdi-V~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAVal 269 (296)
T KOG0502|consen 191 KYRESALSLATRGGYTDI-VELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVAL 269 (296)
T ss_pred hhhhhhHhHHhcCChHHH-HHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHh
Confidence 346777888888776555 5699999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccC
Q 004027 757 GRPNTCRSGFFHWT 770 (778)
Q Consensus 757 Gh~eiV~lLL~~~~ 770 (778)
|.. +|+..|.++.
T Consensus 270 Gyr-~Vqqvie~h~ 282 (296)
T KOG0502|consen 270 GYR-IVQQVIEKHA 282 (296)
T ss_pred hhH-HHHHHHHHHH
Confidence 987 7776666543
No 93
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.23 E-value=2.4e-06 Score=96.72 Aligned_cols=68 Identities=25% Similarity=0.259 Sum_probs=61.7
Q ss_pred CCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhcc
Q 004027 702 GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHW 769 (778)
Q Consensus 702 ~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~ 769 (778)
.+..++..|..|.||||+|+.+|+...++.|+.+||++..++++||+|||-|+..|+.+++..+|.|.
T Consensus 44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHL 111 (560)
T ss_pred hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHHh
Confidence 34467889999999999999999999999999999999999999999999999999998887766554
No 94
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.19 E-value=1e-06 Score=72.13 Aligned_cols=39 Identities=31% Similarity=0.409 Sum_probs=23.2
Q ss_pred HHhCC-CCcccccCCCCcHHHHHHHCCCHHHHHHHHhccC
Q 004027 732 TTVAG-VNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWT 770 (778)
Q Consensus 732 LL~~G-Advn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~ 770 (778)
||++| ++++.+|..|.||||+||.+|+.++|++||.+..
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~ 40 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGA 40 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcC
Confidence 67888 8999999999999999999999999999995443
No 95
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.14 E-value=3.1e-06 Score=61.79 Aligned_cols=33 Identities=33% Similarity=0.341 Sum_probs=30.1
Q ss_pred CCccHHHHHHHcCCHhHHHHHHhCCCCcccccC
Q 004027 712 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDV 744 (778)
Q Consensus 712 ~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~ 744 (778)
+|+||||+||..|+.+++++||.+|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 489999999999999999999999999998874
No 96
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.12 E-value=4.6e-06 Score=67.25 Aligned_cols=52 Identities=17% Similarity=0.017 Sum_probs=41.1
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTT 733 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL 733 (778)
++|+.++..+..+.+. .+++.|.++|.+|..|+||||+|+..|+.+++++||
T Consensus 3 t~lh~A~~~g~~~~~~-~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 3 TPLHWAARSGNLEIVK-LLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp BHHHHHHHTT-HHHHH-HHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred hHHHHHHHhCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 3688899999887765 778889999999999999999999999999999986
No 97
>PF13606 Ank_3: Ankyrin repeat
Probab=98.06 E-value=4.5e-06 Score=60.26 Aligned_cols=29 Identities=28% Similarity=0.280 Sum_probs=19.6
Q ss_pred CCccHHHHHHHcCCHhHHHHHHhCCCCcc
Q 004027 712 CGQGVLHFAAALGYDWALEPTTVAGVNIN 740 (778)
Q Consensus 712 ~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn 740 (778)
.|+||||+||..|+.++|++||++|+|||
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 36667777776677777777776666665
No 98
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.05 E-value=3.9e-06 Score=98.17 Aligned_cols=89 Identities=17% Similarity=-0.028 Sum_probs=81.3
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
++||+|+.++..+.+. +|++..+-++.+|..|.+|||+||+.|+.++++.|+.++..+|+....|.||||.||..||.+
T Consensus 51 Talhha~Lng~~~is~-llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~d 129 (854)
T KOG0507|consen 51 TLLHHAVLNGQNQISK-LLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLE 129 (854)
T ss_pred hHHHHHHhcCchHHHH-HHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchH
Confidence 4789999888776654 788888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccC
Q 004027 761 TCRSGFFHWT 770 (778)
Q Consensus 761 iV~lLL~~~~ 770 (778)
+|.+||.+..
T Consensus 130 vv~~Ll~~~a 139 (854)
T KOG0507|consen 130 VVFYLLKKNA 139 (854)
T ss_pred HHHHHHhcCC
Confidence 9999987765
No 99
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.04 E-value=1.7e-06 Score=101.29 Aligned_cols=64 Identities=25% Similarity=0.305 Sum_probs=56.7
Q ss_pred CCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccC-CCCcHHHHHHHCCCHHHHHHHHhcc
Q 004027 706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALHWAAYCGRPNTCRSGFFHW 769 (778)
Q Consensus 706 vN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~-~G~TPLH~AA~~Gh~eiV~lLL~~~ 769 (778)
.|.+|..|+|+||+|+.-|...+++.||.+|++++.+|. .||||||-|.++||.+||-+||.+.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g 109 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG 109 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcC
Confidence 667889999999999999999999999999999999884 7899999999999999999988775
No 100
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=98.01 E-value=3e-05 Score=68.82 Aligned_cols=79 Identities=18% Similarity=0.110 Sum_probs=66.7
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCCCCCcccEEEEeCCCcccc
Q 004027 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCS 588 (778)
Q Consensus 509 sI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH~pG~VpL~Vtcsnr~~cS 588 (778)
.|..|+|.-|. -|++|+|.|.+|... .-.|+||+.+++...|++..|.|.+|.+.+|...+.|+..++.. |
T Consensus 2 ~I~~i~P~~g~--pG~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G~~-S 72 (81)
T cd00604 2 LIGSVGPVMGK--PGNTVTISGEGFGST------GGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDGVT-S 72 (81)
T ss_pred eEeeEcCCCCC--CCCEEEEEEECCCCC------ccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCCcc-c
Confidence 68889998887 688999999999762 24699999999999999999999999999999999999755553 6
Q ss_pred cceeeeec
Q 004027 589 EVREFEYR 596 (778)
Q Consensus 589 EVr~FEYr 596 (778)
+...|+|.
T Consensus 73 n~~~f~~l 80 (81)
T cd00604 73 NGYNFEVL 80 (81)
T ss_pred CcEeEEEc
Confidence 66678884
No 101
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.95 E-value=1.5e-05 Score=94.17 Aligned_cols=93 Identities=16% Similarity=0.062 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCcc--------CC---------------CCccHHHHHHHcCCHhHHHHHHh
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVL--------DH---------------CGQGVLHFAAALGYDWALEPTTV 734 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~--------D~---------------~GqTpLHlAA~lG~~~~Vk~LL~ 734 (778)
...+.||.|+.+...+.+. .|++.|+||+.+ +. -|..||-+||..+..+++++|++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~-lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVR-LLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred cCcchHHHHHHhccHHHHH-HHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 3466788888888877665 888888888742 11 25678999999999999999999
Q ss_pred CCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 735 AGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 735 ~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
+|||++++|.+|.|-||.-+.+-..+|-.++|.++..
T Consensus 262 ~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 262 HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN 298 (782)
T ss_pred cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999988888888777888888877764
No 102
>PF13606 Ank_3: Ankyrin repeat
Probab=97.93 E-value=9.7e-06 Score=58.53 Aligned_cols=29 Identities=34% Similarity=0.282 Sum_probs=26.2
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHhccCCcc
Q 004027 745 NGWTALHWAAYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 745 ~G~TPLH~AA~~Gh~eiV~lLL~~~~q~~ 773 (778)
+|+||||+||..|+.++|++||+++...+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 59999999999999999999999876543
No 103
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=97.76 E-value=7.6e-05 Score=84.50 Aligned_cols=86 Identities=14% Similarity=-0.089 Sum_probs=72.3
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccc-cCCCCcHHHHHH--H
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFR-DVNGWTALHWAA--Y 755 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~r-D~~G~TPLH~AA--~ 755 (778)
.-+.||.|+..++++.+. .|++.|+++|..|.+|+||||.||.-+..-+++.|++.|+-|-+. =.++.||..-.- .
T Consensus 583 GITaLHNAiCaghyeIVk-FLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~e 661 (752)
T KOG0515|consen 583 GITALHNAICAGHYEIVK-FLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEME 661 (752)
T ss_pred chhHHhhhhhcchhHHHH-HHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhh
Confidence 456899999999998765 999999999999999999999999999999999999999987654 356778866543 3
Q ss_pred CCCHHHHHHH
Q 004027 756 CGRPNTCRSG 765 (778)
Q Consensus 756 ~Gh~eiV~lL 765 (778)
-|...|..+|
T Consensus 662 eGY~~CsqyL 671 (752)
T KOG0515|consen 662 EGYDQCSQYL 671 (752)
T ss_pred hhHHHHHHHH
Confidence 4667788876
No 104
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.74 E-value=5e-05 Score=89.93 Aligned_cols=88 Identities=20% Similarity=0.148 Sum_probs=75.5
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCC--cccccCCCCcHHHHHHHCC
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN--INFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAd--vn~rD~~G~TPLH~AA~~G 757 (778)
+..|--|+.-+..+ +.+.|++.|+|++.+|..|.|.||+....-..++...+|.+|++ ...+++.|-|||.+||.-|
T Consensus 241 EyPLSfAAC~nq~e-ivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklG 319 (782)
T KOG3676|consen 241 EYPLSFAACTNQPE-IVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLG 319 (782)
T ss_pred cCchHHHHHcCCHH-HHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhh
Confidence 33444444444344 45689999999999999999999999999888999999999999 8899999999999999999
Q ss_pred CHHHHHHHHhc
Q 004027 758 RPNTCRSGFFH 768 (778)
Q Consensus 758 h~eiV~lLL~~ 768 (778)
+.+|.+.+|++
T Consensus 320 k~emf~~ile~ 330 (782)
T KOG3676|consen 320 KKEMFQHILER 330 (782)
T ss_pred hHHHHHHHHHh
Confidence 99999998887
No 105
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.67 E-value=1.4e-05 Score=95.91 Aligned_cols=92 Identities=15% Similarity=-0.020 Sum_probs=82.9
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccc-cCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFR-DVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~r-D~~G~TPLH~AA~~G 757 (778)
.++.|-.+|.+++.+.+ ++|+..|+++..+|+.|.+||.+||-.|+..+|+.|+.+.+++.++ |+.+.|+|.+||..|
T Consensus 757 ~~t~LT~acaggh~e~v-ellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsgg 835 (2131)
T KOG4369|consen 757 IKTNLTSACAGGHREEV-ELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGG 835 (2131)
T ss_pred ccccccccccCccHHHH-HHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCC
Confidence 35567788888887765 4889999999999999999999999999999999999999999986 899999999999999
Q ss_pred CHHHHHHHHhccCC
Q 004027 758 RPNTCRSGFFHWTQ 771 (778)
Q Consensus 758 h~eiV~lLL~~~~q 771 (778)
++++|++||.+..+
T Consensus 836 r~~vvelLl~~gan 849 (2131)
T KOG4369|consen 836 RTRVVELLLNAGAN 849 (2131)
T ss_pred cchHHHHHHHhhcc
Confidence 99999999988764
No 106
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=97.61 E-value=0.00017 Score=65.69 Aligned_cols=82 Identities=12% Similarity=-0.032 Sum_probs=67.1
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
...||.|..-+..+.+ +.++..|++++.+|+.|.|||..|...||..+|++||..||+-..+...|.+.+.-+ ..
T Consensus 35 R~plhyAAD~GQl~il-efli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat----e~ 109 (117)
T KOG4214|consen 35 RTPLHYAADYGQLSIL-EFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT----EE 109 (117)
T ss_pred cccchHhhhcchHHHH-HHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc----cH
Confidence 4568888887766654 588899999999999999999999999999999999999999888888888765433 23
Q ss_pred HHHHHHH
Q 004027 760 NTCRSGF 766 (778)
Q Consensus 760 eiV~lLL 766 (778)
+-++.||
T Consensus 110 edIr~LL 116 (117)
T KOG4214|consen 110 EDIRELL 116 (117)
T ss_pred HHHHHHh
Confidence 4455554
No 107
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=97.59 E-value=7e-05 Score=54.65 Aligned_cols=28 Identities=32% Similarity=0.422 Sum_probs=25.2
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 745 NGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 745 ~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
+|+||||+|+..|+.++|++||.+.+..
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 5999999999999999999999976643
No 108
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.54 E-value=0.00015 Score=73.40 Aligned_cols=71 Identities=20% Similarity=0.059 Sum_probs=66.0
Q ss_pred CCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCC-CCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCcc
Q 004027 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 703 GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~G-Advn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~~ 773 (778)
+.++|.+|..|+|+|+.||..|..+++.+|+.+| +.|...|..|.+++.+|-..|+.++|+.|.+..+.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets 73 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETS 73 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence 4578999999999999999999999999999999 8999999999999999999999999999988766553
No 109
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=97.53 E-value=0.00022 Score=85.65 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhC-------CCCcccccCCCCcH
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-------GVNINFRDVNGWTA 749 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~-------GAdvn~rD~~G~TP 749 (778)
....+.||.|+..+..+.+. .|++.|++++.+|..|.||||+|+..|+.+++++|+.+ |++++..+..|.+|
T Consensus 113 ~~G~TpLh~Aa~~g~~eiv~-~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~ 191 (664)
T PTZ00322 113 YDGRTPLHIACANGHVQVVR-VLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPP 191 (664)
T ss_pred CCCCcHHHHHHHCCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCc
Confidence 34567899999999887665 88999999999999999999999999999999999998 99999999999998
Q ss_pred HHHHHH
Q 004027 750 LHWAAY 755 (778)
Q Consensus 750 LH~AA~ 755 (778)
+..+..
T Consensus 192 ~~~~~~ 197 (664)
T PTZ00322 192 SLEDSP 197 (664)
T ss_pred cchhhh
Confidence 887763
No 110
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.45 E-value=6e-05 Score=90.86 Aligned_cols=95 Identities=17% Similarity=0.107 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccc--cCCCCcHHHHHHH
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFR--DVNGWTALHWAAY 755 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~r--D~~G~TPLH~AA~ 755 (778)
.+++.|..+|..+..+.+ ++|+..|++-..++-...|||-+|+.-||.++|+.||.+|+.||.| .+.|..||++|+.
T Consensus 823 tkdt~lSlacsggr~~vv-elLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatm 901 (2131)
T KOG4369|consen 823 TKDTMLSLACSGGRTRVV-ELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATM 901 (2131)
T ss_pred ccCceEEEecCCCcchHH-HHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhh
Confidence 345556666766666654 4788888877677778889999999999999999999999888877 4678899999999
Q ss_pred CCCHHHHHHHHhccCCcc
Q 004027 756 CGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 756 ~Gh~eiV~lLL~~~~q~~ 773 (778)
.||.+.+++||...+.-|
T Consensus 902 ngh~~at~~ll~~gsdiN 919 (2131)
T KOG4369|consen 902 NGHQAATLSLLQPGSDIN 919 (2131)
T ss_pred ccccHHHHHHhcccchhc
Confidence 999999999887776533
No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.40 E-value=0.00022 Score=78.36 Aligned_cols=56 Identities=23% Similarity=0.149 Sum_probs=44.4
Q ss_pred ccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhcc
Q 004027 714 QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHW 769 (778)
Q Consensus 714 qTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~ 769 (778)
..-|..||..|..+.|+.|++.|+++|.+|+....||.+|+.+||+.+|++||+..
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenG 92 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENG 92 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcC
Confidence 55667788888888888888888888888888888888888888888888887764
No 112
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.10 E-value=0.00084 Score=76.59 Aligned_cols=90 Identities=19% Similarity=0.079 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCC--CCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKG--PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~Gad--vN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
...+||++++.+..+.+. .+++.|.. ++..|+.|.|+||-||..+...++.+|+++||++...|..|.||-.-|-..
T Consensus 899 ~~sllh~a~~tg~~eivk-yildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa 977 (1004)
T KOG0782|consen 899 HCSLLHYAAKTGNGEIVK-YILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQA 977 (1004)
T ss_pred hhhHHHHHHhcCChHHHH-HHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhc
Confidence 456788888888777665 66666643 556678888888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHhcc
Q 004027 757 GRPNTCRSGFFHW 769 (778)
Q Consensus 757 Gh~eiV~lLL~~~ 769 (778)
|..+++.+|-.+.
T Consensus 978 ~d~dlaayle~rq 990 (1004)
T KOG0782|consen 978 GDPDLAAYLESRQ 990 (1004)
T ss_pred CCchHHHHHhhhh
Confidence 8888888875543
No 113
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=96.96 E-value=0.0013 Score=75.01 Aligned_cols=88 Identities=23% Similarity=0.209 Sum_probs=69.9
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCC--cccccCCCCcHHHHHHHCC
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN--INFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAd--vn~rD~~G~TPLH~AA~~G 757 (778)
+.+|+.++.+.+. .+.+ ....|.++-.++.+-.+.||+|+..|..++|++||++|.. ++..|..|.|+||-||..+
T Consensus 868 eeil~av~~~D~~-klqE-~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~ 945 (1004)
T KOG0782|consen 868 EEILRAVLSSDLM-KLQE-THLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQR 945 (1004)
T ss_pred HHHHHHHHhccHH-HHHH-HHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhc
Confidence 3456555554433 3332 3345556667889999999999999999999999999985 7889999999999999999
Q ss_pred CHHHHHHHHhcc
Q 004027 758 RPNTCRSGFFHW 769 (778)
Q Consensus 758 h~eiV~lLL~~~ 769 (778)
+..++.+|+...
T Consensus 946 ~r~vc~~lvdag 957 (1004)
T KOG0782|consen 946 NRAVCQLLVDAG 957 (1004)
T ss_pred chHHHHHHHhcc
Confidence 999999987643
No 114
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.89 E-value=0.00074 Score=80.03 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCC-CCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHH
Q 004027 676 EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDH-CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754 (778)
Q Consensus 676 d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~-~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA 754 (778)
+......||.++..+-...+ +-|+.+|++++.+|+ .|.||||-|...|+.+++-.||.+|+++..+|+.|..||.+-+
T Consensus 49 D~~GR~alH~~~S~~k~~~l-~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~ 127 (1267)
T KOG0783|consen 49 DRYGRTALHIAVSENKNSFL-RWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLS 127 (1267)
T ss_pred HhhccceeeeeeccchhHHH-HHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHh
Confidence 33455667777666655554 477888999999996 6999999999999999999999999999999999999999988
Q ss_pred HC
Q 004027 755 YC 756 (778)
Q Consensus 755 ~~ 756 (778)
+-
T Consensus 128 r~ 129 (1267)
T KOG0783|consen 128 RV 129 (1267)
T ss_pred hc
Confidence 73
No 115
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.72 E-value=0.0014 Score=79.64 Aligned_cols=87 Identities=20% Similarity=0.067 Sum_probs=76.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
..+||.++..+.. .+.+.|+..|+++|.+|..|+||||.+...|+...+..|+.+|++.++.|..|.+||++|....+.
T Consensus 657 ~s~lh~a~~~~~~-~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~ 735 (785)
T KOG0521|consen 657 CSLLHVAVGTGDS-GAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANA 735 (785)
T ss_pred cchhhhhhccchH-HHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccc
Confidence 4578888877754 456689999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHh
Q 004027 760 NTCRSGFF 767 (778)
Q Consensus 760 eiV~lLL~ 767 (778)
+++-+|..
T Consensus 736 d~~~l~~l 743 (785)
T KOG0521|consen 736 DIVLLLRL 743 (785)
T ss_pred cHHHHHhh
Confidence 88776643
No 116
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=96.25 E-value=0.0026 Score=71.80 Aligned_cols=62 Identities=23% Similarity=0.155 Sum_probs=57.0
Q ss_pred cCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccC
Q 004027 709 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWT 770 (778)
Q Consensus 709 ~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~ 770 (778)
++.++.-.+.+||..|...+++.+.-.|.|++.+|.+.+|+||.||.-||.+++++||..|-
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~k 563 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACK 563 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHc
Confidence 34567788899999999999999999999999999999999999999999999999998764
No 117
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=96.23 E-value=0.016 Score=53.71 Aligned_cols=82 Identities=20% Similarity=0.166 Sum_probs=66.8
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCC-------eeeeeEEe----eCCceeeecCC-C-----C
Q 004027 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGE-------IEVPAEIV----AGGVLRCHTSS-Q-----K 571 (778)
Q Consensus 509 sI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd-------~eVpaei~----q~GVLrC~~Pp-H-----~ 571 (778)
.|.+++-.-++..||-+|.++|..+.- . ..-|.|++ .|+-|.+- ....++|.+|| | .
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~k-~-----dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVNK-P-----DIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCCC-C-----CCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 588999999999999999999998754 2 36799999 67777663 55678899998 2 4
Q ss_pred CCcccEEEEeCCCcccccceeeeec
Q 004027 572 VGRVPFYVTCSNRLSCSEVREFEYR 596 (778)
Q Consensus 572 pG~VpL~Vtcsnr~~cSEVr~FEYr 596 (778)
|=.|+|+|.......+|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 5578888888777789999999995
No 118
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=95.97 E-value=0.018 Score=71.37 Aligned_cols=92 Identities=21% Similarity=0.177 Sum_probs=77.1
Q ss_pred CCCceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe-eeeeEEeeCCc-eeeecCCC-CCCcccEEEE
Q 004027 504 QDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-EVPAEIVAGGV-LRCHTSSQ-KVGRVPFYVT 580 (778)
Q Consensus 504 q~q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei~q~GV-LrC~~PpH-~pG~VpL~Vt 580 (778)
--|.+.|..+.|.||+..|||.|+++|+.+-.+ ++-.|++|+. .-+....+++. |+|..++. .++.-++.|.
T Consensus 139 s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~g-----s~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~v~ 213 (1025)
T KOG3610|consen 139 SLQGPCFLSAEPVNGPASGGTQVHCTGSPLDTG-----SCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVLVS 213 (1025)
T ss_pred eecceeEEeeccCcCCCCCCcceEEeccccccC-----CCceEEecCCccceeEeecCceEEEEecCCCCCCCccceEEE
Confidence 456789999999999999999999999999876 6789999999 88888888886 99999998 5589999999
Q ss_pred eCCCcccccceeeeeccCCC
Q 004027 581 CSNRLSCSEVREFEYRASHI 600 (778)
Q Consensus 581 csnr~~cSEVr~FEYr~~~~ 600 (778)
.+.+..-...-.|+|...+.
T Consensus 214 f~~~~~~~~~~~f~y~~dps 233 (1025)
T KOG3610|consen 214 FDRTPQKLTPLAFNYTADPS 233 (1025)
T ss_pred ecccccccCCCCcccccCCc
Confidence 97765434467788876543
No 119
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.94 E-value=0.0031 Score=76.96 Aligned_cols=80 Identities=19% Similarity=0.091 Sum_probs=67.9
Q ss_pred HHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcc------cccCCCCcHHHHHHHCCCHH
Q 004027 687 LKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNIN------FRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 687 lk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn------~rD~~G~TPLH~AA~~Gh~e 760 (778)
|....++|....+.-.|..++.+|..|+||||||+..|+..++..|+..|++.. ..+-.|.|+-..|...||..
T Consensus 615 ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~g 694 (975)
T KOG0520|consen 615 CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKG 694 (975)
T ss_pred hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccc
Confidence 666777887655566788899999999999999999999999999998776543 44567999999999999999
Q ss_pred HHHHHH
Q 004027 761 TCRSGF 766 (778)
Q Consensus 761 iV~lLL 766 (778)
+..+|-
T Consensus 695 ia~~ls 700 (975)
T KOG0520|consen 695 IAGYLS 700 (975)
T ss_pred hHHHHh
Confidence 988864
No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.46 E-value=0.028 Score=64.18 Aligned_cols=81 Identities=20% Similarity=0.077 Sum_probs=59.8
Q ss_pred HHHhchHHHHHHHHHhCCCCCCc------cCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 686 LLKEKLQVWLVQKAAEGGKGPCV------LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 686 alk~kl~e~L~e~Lle~GadvN~------~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.++.+.....++.|.+.+.+.|. .+..--|+||+||..|...+|..||..|+|+...|..|.||..+++ +.
T Consensus 397 ~lkk~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nk 473 (591)
T KOG2505|consen 397 RLKKKPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NK 473 (591)
T ss_pred HHhccCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cH
Confidence 34444444445566666666543 3445789999999999999999999999999999999999999988 34
Q ss_pred HHHHHHHhcc
Q 004027 760 NTCRSGFFHW 769 (778)
Q Consensus 760 eiV~lLL~~~ 769 (778)
++-..++.++
T Consensus 474 dVk~~F~a~~ 483 (591)
T KOG2505|consen 474 DVKSIFIARR 483 (591)
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 121
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=95.40 E-value=0.057 Score=48.85 Aligned_cols=66 Identities=15% Similarity=0.260 Sum_probs=55.4
Q ss_pred eEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCC-----------CCCcccEEEEeCCCccccccee
Q 004027 524 VKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-----------KVGRVPFYVTCSNRLSCSEVRE 592 (778)
Q Consensus 524 tKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH-----------~pG~VpL~Vtcsnr~~cSEVr~ 592 (778)
.-+-++|.+|.. ++.|.||++++-+-+-.+-.|.|.+|+- +|..||+.+....+..-+.-..
T Consensus 20 amlEl~GenF~p-------nLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTP-------NLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCC-------CceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 567788999975 4889999999999888899999999982 5678999988878877777778
Q ss_pred eeec
Q 004027 593 FEYR 596 (778)
Q Consensus 593 FEYr 596 (778)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 8884
No 122
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=95.29 E-value=0.057 Score=50.04 Aligned_cols=82 Identities=24% Similarity=0.281 Sum_probs=60.7
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe--------eeeeEE----eeCCceeeecCC-C---
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI--------EVPAEI----VAGGVLRCHTSS-Q--- 570 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~--------eVpaei----~q~GVLrC~~Pp-H--- 570 (778)
+..|.+.|-.-++..||-||+++|..+... .-|.|-+. |+-|++ +....|+|.+|| |
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~kD-------ikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLKD-------SKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCCC-------CEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 357999999999999999999999987543 23666531 333333 567889999999 2
Q ss_pred --CCCcccEEEEeCCCcccccceeeeec
Q 004027 571 --KVGRVPFYVTCSNRLSCSEVREFEYR 596 (778)
Q Consensus 571 --~pG~VpL~Vtcsnr~~cSEVr~FEYr 596 (778)
.|=.|-|+|..+. -..|+...|+|.
T Consensus 74 I~~pV~V~~~l~~~~-~~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGK-RKRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCC-CCcCCCCCcEec
Confidence 5556777776543 357999999995
No 123
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=95.26 E-value=0.011 Score=72.14 Aligned_cols=62 Identities=26% Similarity=0.250 Sum_probs=57.8
Q ss_pred CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 711 HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 711 ~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
..|.|+||.|+..|-.-++++|+..|+++|.+|..|.||||.+...||...+.+|+.+....
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~ 715 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADP 715 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccc
Confidence 45799999999999999999999999999999999999999999999999999999876644
No 124
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.86 E-value=0.08 Score=58.85 Aligned_cols=75 Identities=15% Similarity=0.061 Sum_probs=61.4
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
-|..+|+.|..+.+. .|++.|.++|..|.....||-+|+..||...|++||++||-..--...|. -.|++|...+
T Consensus 39 elceacR~GD~d~v~-~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~-RC~YgaLnd~ 113 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVR-YLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGD-RCHYGALNDR 113 (516)
T ss_pred HHHHHhhcccHHHHH-HHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcc-hhhhhhhhHH
Confidence 466788889888876 78889999999999999999999999999999999999986554334454 4477776543
No 125
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.71 E-value=0.051 Score=35.31 Aligned_cols=23 Identities=30% Similarity=0.251 Sum_probs=12.5
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhc
Q 004027 746 GWTALHWAAYCGRPNTCRSGFFH 768 (778)
Q Consensus 746 G~TPLH~AA~~Gh~eiV~lLL~~ 768 (778)
|+||||+|+..|+.++++.|+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~ 24 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDK 24 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc
Confidence 45555555555555555555543
No 126
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.52 E-value=0.056 Score=35.09 Aligned_cols=29 Identities=31% Similarity=0.281 Sum_probs=26.5
Q ss_pred CCccHHHHHHHcCCHhHHHHHHhCCCCcc
Q 004027 712 CGQGVLHFAAALGYDWALEPTTVAGVNIN 740 (778)
Q Consensus 712 ~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn 740 (778)
.|.|+||+|+..|..++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999998765
No 127
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=94.40 E-value=0.061 Score=61.40 Aligned_cols=65 Identities=22% Similarity=0.049 Sum_probs=54.9
Q ss_pred ccCCCCcc------HHHHHHHcCCHhHHHHHHhCCCCccccc-CCCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 708 VLDHCGQG------VLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 708 ~~D~~GqT------pLHlAA~lG~~~~Vk~LL~~GAdvn~rD-~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
.+|.+|-| -||.++..|+.+..--||..||++|+.+ ..|.||||.||..|+.--|++|+-+.+..
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~ 193 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP 193 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCC
Confidence 35666554 4799999999999999999999999986 57999999999999999999988766543
No 128
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.29 E-value=0.046 Score=65.90 Aligned_cols=88 Identities=13% Similarity=-0.068 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCc----------ccccCC
Q 004027 676 EEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNI----------NFRDVN 745 (778)
Q Consensus 676 d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdv----------n~rD~~ 745 (778)
+......++.++.+.+.+.+. .|++....+ .-+|-+|...|+.++|+.++.+-... ...-.-
T Consensus 59 d~lGr~al~iai~nenle~~e-LLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ 130 (822)
T KOG3609|consen 59 DPLGRLALHIAIDNENLELQE-LLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTP 130 (822)
T ss_pred ChHhhhceecccccccHHHHH-HHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCC
Confidence 345556677788777776654 665543322 34566677888888888888653322 133456
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 746 GWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 746 G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
+-|||.+||.+++.||+++||.+..-
T Consensus 131 ditPliLAAh~NnyEil~~Ll~kg~~ 156 (822)
T KOG3609|consen 131 DITPLMLAAHLNNFEILQCLLTRGHC 156 (822)
T ss_pred CccHHHHHHHhcchHHHHHHHHcCCC
Confidence 78999999999999999999987653
No 129
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=93.10 E-value=0.22 Score=46.32 Aligned_cols=82 Identities=15% Similarity=0.074 Sum_probs=59.1
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe-------eeee-----EEeeCCceeeecCC-C-----
Q 004027 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-------EVPA-----EIVAGGVLRCHTSS-Q----- 570 (778)
Q Consensus 509 sI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~-------eVpa-----ei~q~GVLrC~~Pp-H----- 570 (778)
.|++++=.-|++.||.||.+++..+.-. ...|.|-+. ++-+ .+...-.+++.+|| |
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~K~------dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQKE------DIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccCCC------CCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 6999999999999999999999876421 134555542 3333 33445568889998 3
Q ss_pred CCCcccEEEEeCCCcccccceeeeec
Q 004027 571 KVGRVPFYVTCSNRLSCSEVREFEYR 596 (778)
Q Consensus 571 ~pG~VpL~Vtcsnr~~cSEVr~FEYr 596 (778)
.|=.|-+++.......+|+...|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 44566677777666668999999995
No 130
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=92.76 E-value=0.11 Score=60.09 Aligned_cols=57 Identities=25% Similarity=0.208 Sum_probs=45.5
Q ss_pred cHHHHHHHcCCHhHH-HHH-HhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 715 GVLHFAAALGYDWAL-EPT-TVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 715 TpLHlAA~lG~~~~V-k~L-L~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
-|||+++......-. +.| .+.+..++.+|..|.||||+|+..||.+++++||...+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad 80 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD 80 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC
Confidence 458998876655444 333 334668999999999999999999999999999988774
No 131
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=92.65 E-value=0.38 Score=56.13 Aligned_cols=63 Identities=14% Similarity=0.033 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcc
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNIN 740 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn 740 (778)
....+.||.++..+.... .++|+-.|+|+-.+|..|+|+|.||-..|..+++..||.+|+...
T Consensus 659 ~~grt~LHLa~~~gnVvl-~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 659 GDGRTALHLAARKGNVVL-AQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred CCCcchhhhhhhhcchhH-HHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 334678999998887654 558889999999999999999999999999999999999998643
No 132
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=91.94 E-value=0.34 Score=57.68 Aligned_cols=103 Identities=22% Similarity=0.376 Sum_probs=68.9
Q ss_pred CChHHHHHHHhccccce-----eCcCCCCCCCCcceEeee---hhhhhhhcccCccceeccCCcchHhhhhhhccCCEee
Q 004027 27 LRPAEICEILRNYTKFR-----IAPESPHTPPSGSLFLFD---RKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDV 98 (778)
Q Consensus 27 l~~~ei~~il~~~~~~~-----~~~~~~~~p~~gs~~l~~---r~~~~~fr~dg~~w~kkk~g~~~~e~h~~lkv~~~~~ 98 (778)
|..++|+++|+.--+.- +.-.=-.+|+-|+|||-= -++.-.|-.|||.|.- -|.--+..|+|..
T Consensus 30 l~~~~~~~~Ll~ap~i~r~~~P~~WtylD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~~- 101 (669)
T PF08549_consen 30 LPPETVVEYLLKAPQIARDTAPFFWTYLDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGYT- 101 (669)
T ss_pred CCHHHHHHHHHhchhhhccCCCeEeecccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCeE-
Confidence 67788888887754321 111124678999998842 2445779999999974 2444455565554
Q ss_pred EEEEeec------cccccccceeeeecccccc---------cceEEEeeeeccC
Q 004027 99 LHCYYAH------GEENENFQRRSYWMLEEEL---------SHIVLVHYREVKG 137 (778)
Q Consensus 99 ~~~~yah------~~~~~~f~rr~y~~l~~~~---------~~ivlvhy~~~~~ 137 (778)
|-.||.. +|.....-||.|-|+-... ...+||||-.-+.
T Consensus 102 lEi~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~ 155 (669)
T PF08549_consen 102 LEIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP 155 (669)
T ss_pred EEEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence 3333332 6788899999999996543 4589999987654
No 133
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=68.38 E-value=7.5 Score=45.23 Aligned_cols=47 Identities=21% Similarity=0.063 Sum_probs=39.5
Q ss_pred HhHHHHHHhCCCCcccc------cCCCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 726 DWALEPTTVAGVNINFR------DVNGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 726 ~~~Vk~LL~~GAdvn~r------D~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
...|++|.+++++.|++ |..--|+||+|+..|..+||..||...|..
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp 456 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDP 456 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCc
Confidence 56678899998887754 555679999999999999999999998754
No 134
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=64.31 E-value=5 Score=47.62 Aligned_cols=51 Identities=24% Similarity=0.254 Sum_probs=39.5
Q ss_pred HHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCc
Q 004027 698 KAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWT 748 (778)
Q Consensus 698 ~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~T 748 (778)
.+++.+..++..|..|.+|+|+++.-|-.++++.++..-.+++.+-..|.+
T Consensus 414 ~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 414 TLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred eeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 355667778888999999999999999999999888766665555544444
No 135
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=63.68 E-value=18 Score=44.53 Aligned_cols=31 Identities=23% Similarity=0.006 Sum_probs=27.9
Q ss_pred CCCccHHHHHHHcCCHhHHHHHHhCCCCccc
Q 004027 711 HCGQGVLHFAAALGYDWALEPTTVAGVNINF 741 (778)
Q Consensus 711 ~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~ 741 (778)
..+.|||.+||..++.+++++||.+|+.+-.
T Consensus 129 t~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 129 TPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred CCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 4579999999999999999999999998654
No 136
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=60.99 E-value=8.3 Score=48.77 Aligned_cols=76 Identities=18% Similarity=0.138 Sum_probs=53.9
Q ss_pred CCCceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe--eeeeEEeeCCceeeecCCCC--CCcccEEE
Q 004027 504 QDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI--EVPAEIVAGGVLRCHTSSQK--VGRVPFYV 579 (778)
Q Consensus 504 q~q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~--eVpaei~q~GVLrC~~PpH~--pG~VpL~V 579 (778)
.-+.++|++|+|.-|+..|||.|+|.|.++..-.+...... ++=|-. .++.++.-...+.|..-++. ||.|.++|
T Consensus 46 ~c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v-~Va~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v 124 (1025)
T KOG3610|consen 46 VCPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGV-KVAGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAV 124 (1025)
T ss_pred ecCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCc-eEeeeecCCCccccccccceeeccCCCCCCCCceeEEe
Confidence 35678899999999999999999999999876432111111 111111 34456666778899888884 79888888
Q ss_pred E
Q 004027 580 T 580 (778)
Q Consensus 580 t 580 (778)
-
T Consensus 125 ~ 125 (1025)
T KOG3610|consen 125 G 125 (1025)
T ss_pred c
Confidence 7
No 137
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=57.51 E-value=16 Score=37.74 Aligned_cols=46 Identities=22% Similarity=-0.009 Sum_probs=40.9
Q ss_pred HHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHh
Q 004027 716 VLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFF 767 (778)
Q Consensus 716 pLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~ 767 (778)
.|..||..|....+--.|+.|.+++. ++|..|+.+.|.+|...++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 45789999999999999999999875 79999999999999988764
No 138
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=45.27 E-value=46 Score=33.05 Aligned_cols=70 Identities=19% Similarity=0.155 Sum_probs=50.6
Q ss_pred ecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe-----eeeeEEeeCCceeeecCCC---CCCcccEEEEeCCC
Q 004027 513 FSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-----EVPAEIVAGGVLRCHTSSQ---KVGRVPFYVTCSNR 584 (778)
Q Consensus 513 ~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~-----eVpaei~q~GVLrC~~PpH---~pG~VpL~Vtcsnr 584 (778)
+.|..=.++.. ||.|+-.--... ....-|.|-.. .+++..|-+-|+++-+|.. -+|.|.+.|.|+|-
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~l~~----~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g~ 77 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDPLDE----EDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDGV 77 (142)
T ss_pred ecCceeecCCC-EEEEEEeCCCCC----CCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECCE
Confidence 45666677777 888775532221 13455666332 5788889999999999999 99999999999875
Q ss_pred ccc
Q 004027 585 LSC 587 (778)
Q Consensus 585 ~~c 587 (778)
..+
T Consensus 78 ~~~ 80 (142)
T PF14545_consen 78 SLG 80 (142)
T ss_pred EEE
Confidence 533
No 139
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=44.07 E-value=59 Score=33.97 Aligned_cols=67 Identities=9% Similarity=-0.120 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHHhchHHHHHHHHHhCC-CCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCccccc
Q 004027 676 EEVKEKLVQKLLKEKLQVWLVQKAAEGG-KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD 743 (778)
Q Consensus 676 d~~~d~lL~~alk~kl~e~L~e~Lle~G-advN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD 743 (778)
|.+.-+.+..+..++..+.+. .|+..| +.|-+.|..|.+++.+|-..|+..+++.|.+.-.+-...+
T Consensus 9 D~fgWTalmcaa~eg~~eavs-yllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~ 76 (223)
T KOG2384|consen 9 DAFGWTALMCAAMEGSNEAVS-YLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPM 76 (223)
T ss_pred hhhcchHHHHHhhhcchhHHH-HHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcc
Confidence 344556677777777777776 677788 8899999999999999999999999999988755544443
No 140
>KOG3743 consensus Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5) [Transcription]
Probab=43.03 E-value=28 Score=40.95 Aligned_cols=71 Identities=15% Similarity=0.264 Sum_probs=48.3
Q ss_pred CceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCCCCC-----------cccEEEEeCCCcccccc
Q 004027 522 SEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVG-----------RVPFYVTCSNRLSCSEV 590 (778)
Q Consensus 522 GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH~pG-----------~VpL~Vtcsnr~~cSEV 590 (778)
.-+-+.+.|.+|.+. +.+.||++|+++.+-..-+|.|.+|.=.++ .||+-++...+..-+-.
T Consensus 506 d~amlel~g~nf~p~-------l~vwfg~~e~et~~r~~~sl~c~Vp~vs~f~~~w~~~~~P~~~~islvr~dg~vy~~~ 578 (622)
T KOG3743|consen 506 DVAMLELHGQNFVPN-------LQVWFGDVEAETYYRSGESLQCVVPDVSAFRQEWLWTRGPTFVPISLVRTDGTVYASG 578 (622)
T ss_pred ceeEEEecCCCCCCC-------ceeeccccCchhhhcccceEEEEeCChhhcccchhcccCceeeeeeheeccceEEecc
Confidence 345667779999875 779999999999998888999999984333 24444443233322334
Q ss_pred eeeeeccCC
Q 004027 591 REFEYRASH 599 (778)
Q Consensus 591 r~FEYr~~~ 599 (778)
..|.|....
T Consensus 579 ~~fty~pe~ 587 (622)
T KOG3743|consen 579 LTFTYTPEC 587 (622)
T ss_pred ceEEecccc
Confidence 468885543
No 141
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=40.18 E-value=42 Score=29.10 Aligned_cols=51 Identities=10% Similarity=-0.017 Sum_probs=36.3
Q ss_pred ccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 714 QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 714 qTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
...|..|...|..++++.+++.+ .++ ...|..|....+.+++..|+..+..
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~y~~ 57 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIENYNL 57 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHhcCC
Confidence 34567788888888888877655 222 3468888888888888888776543
No 142
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=35.39 E-value=1.1e+02 Score=32.45 Aligned_cols=63 Identities=17% Similarity=0.129 Sum_probs=49.2
Q ss_pred CceEEEEEccCCCchhh--------hcccceEEEeCCeeeeeEEeeCCceeeecCCC-CCCcccEEEEeCCC
Q 004027 522 SEVKVLITGRFLMSQQE--------AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNR 584 (778)
Q Consensus 522 GGtKVlI~G~f~~~~~~--------~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH-~pG~VpL~Vtcsnr 584 (778)
-|.=|+|-|++|..... ..-..-+|.|+++.+|--+++++-+.|.+|.- .+|.+.+.|...+.
T Consensus 4 PG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~ 75 (215)
T TIGR03437 4 PGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGG 75 (215)
T ss_pred CCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCc
Confidence 45668888888874311 11134679999999999999999999999987 78999999987554
No 143
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=34.87 E-value=17 Score=30.78 Aligned_cols=9 Identities=56% Similarity=1.106 Sum_probs=5.8
Q ss_pred ccCccceec
Q 004027 70 KDGHNWRKK 78 (778)
Q Consensus 70 ~dg~~w~kk 78 (778)
.|||.|||=
T Consensus 2 ~Dgy~WRKY 10 (60)
T PF03106_consen 2 DDGYRWRKY 10 (60)
T ss_dssp -SSS-EEEE
T ss_pred CCCCchhhc
Confidence 499999873
No 144
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=34.80 E-value=1.2e+02 Score=27.29 Aligned_cols=64 Identities=20% Similarity=0.165 Sum_probs=40.1
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe-eeeeEE-eeCCceee--ecCCC-CCCcccEEEE
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-EVPAEI-VAGGVLRC--HTSSQ-KVGRVPFYVT 580 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei-~q~GVLrC--~~PpH-~pG~VpL~Vt 580 (778)
..|.-++|.---..++++|+|.|..|... ++||.= +|.... ..++-++- .+..- .||.++|.+.
T Consensus 2 p~i~aV~P~~lkaG~~t~vti~Gt~L~~~---------v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg 70 (81)
T PF09099_consen 2 PTILAVSPAGLKAGEETTVTIVGTGLAGT---------VDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVG 70 (81)
T ss_dssp SEEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEET
T ss_pred CeEEEECchhccCCCeEEEEEEecCcccc---------eecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEec
Confidence 37889999999999999999999999432 777764 444322 44444433 44443 6677776553
No 145
>PF05587 Anth_Ig: Anthrax receptor extracellular domain; InterPro: IPR008400 Anthrax is an acute disease in humans and animals caused by the bacterium Bacillus anthracis, which can be lethal. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment. The anthrax bacillus is one of only a few that can form long-lived spores. The anthrax toxin consists of the proteins protective antigen (PA) lethal factor (LF) and oedema factor (EF). The first step of toxin entry into host cells is the recognition by PA of a receptor on the surface of the target cell. The subsequent cleavage of receptor-bound PA enables EF and LF to bind and form a heptameric PA63 pre-pore, which triggers endocytosis. PA has been shown to bind to two cellular receptors: anthrax toxin receptor/tumour endothelial marker 8 and capillary morphogenesis protein 2 (CMG2), which are closely related host cell receptors. Both bind to PA with high affinity and are capable of mediating toxicity [, ], and both are type 1 membrane proteins that include an approximately 200-aa extracellular von Willebrand factor A (VWA) domain with a metal ion-dependent adhesion site (MIDAS) motif []. This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to IPR002909 from INTERPRO.; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3N2N_E 1SHT_X 1TZN_o 1SHU_X.
Probab=27.91 E-value=20 Score=33.80 Aligned_cols=74 Identities=20% Similarity=0.373 Sum_probs=0.0
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEe--CCe----eeeeEEeeCCceeeecCC-CCCCc-ccEEEE
Q 004027 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMF--GEI----EVPAEIVAGGVLRCHTSS-QKVGR-VPFYVT 580 (778)
Q Consensus 509 sI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmF--Gd~----eVpaei~q~GVLrC~~Pp-H~pG~-VpL~Vt 580 (778)
.|..+-|.---+.+.-.|.|.|.+|....... ...|-| .+. +=|+ .++++.|.|-+|- +.||. +.|+|+
T Consensus 7 Eil~~ePSsvC~ge~f~Vvv~G~GF~~~~~~d--~ViC~F~~n~t~~~~~KP~-~v~dt~llCPaP~l~~~G~~~~v~VS 83 (105)
T PF05587_consen 7 EILSVEPSSVCVGESFQVVVRGNGFNNARNVD--QVICRFKFNDTKTVDEKPV-SVEDTYLLCPAPVLEEPGQTIFVEVS 83 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEcCCceECCCceEEEEECccccccCCCC--eEEEEEEECCeeEEEeCCc-EEcCCEEECCCccccCCCCEEEEEEE
Confidence 67778888888999999999999988765422 344544 433 2234 7899999998886 49994 667777
Q ss_pred eCCCc
Q 004027 581 CSNRL 585 (778)
Q Consensus 581 csnr~ 585 (778)
..|+.
T Consensus 84 lNnG~ 88 (105)
T PF05587_consen 84 LNNGK 88 (105)
T ss_dssp -----
T ss_pred EcCCE
Confidence 76654
No 146
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=27.52 E-value=23 Score=29.96 Aligned_cols=9 Identities=56% Similarity=1.121 Sum_probs=7.2
Q ss_pred ccCccceec
Q 004027 70 KDGHNWRKK 78 (778)
Q Consensus 70 ~dg~~w~kk 78 (778)
.|||.|||=
T Consensus 2 ~DGy~WRKY 10 (59)
T smart00774 2 DDGYQWRKY 10 (59)
T ss_pred CCccccccc
Confidence 599999863
No 147
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=22.77 E-value=41 Score=39.90 Aligned_cols=104 Identities=33% Similarity=0.451 Sum_probs=67.8
Q ss_pred ChHH-HHHHHhccccc-------eeCcCCC-CCCCCcc---eEeee-hhhhhhhcccCc-cceeccCCcchHh---hhhh
Q 004027 28 RPAE-ICEILRNYTKF-------RIAPESP-HTPPSGS---LFLFD-RKVLRYFRKDGH-NWRKKKDGKTVKE---AHER 90 (778)
Q Consensus 28 ~~~e-i~~il~~~~~~-------~~~~~~~-~~p~~gs---~~l~~-r~~~~~fr~dg~-~w~kkk~g~~~~e---~h~~ 90 (778)
+|+| +..||.||--. .|++.-| -.-.+|| .+||| |++++-||-||- +--.-||-+-|+- .|.|
T Consensus 184 ~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlk 263 (758)
T KOG1310|consen 184 NPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLK 263 (758)
T ss_pred CccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCcccc
Confidence 5666 88888887643 2333322 2234566 68999 899999999986 6666777777775 7777
Q ss_pred hccCCEeeEE--EEeeccccccccceeeeecccccccceEEEeeeecc
Q 004027 91 LKAGSVDVLH--CYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136 (778)
Q Consensus 91 lkv~~~~~~~--~~yah~~~~~~f~rr~y~~l~~~~~~ivlvhy~~~~ 136 (778)
..-|+.+..+ |-|+--.-|- .==|+.-.-||+.|.|--+.+
T Consensus 264 n~~gn~~~~~~~~t~vtfnpNG-----tElLvs~~gEhVYlfdvn~~~ 306 (758)
T KOG1310|consen 264 NSQGNLDRYITCCTYVTFNPNG-----TELLVSWGGEHVYLFDVNEDK 306 (758)
T ss_pred CcccccccceeeeEEEEECCCC-----cEEEEeeCCeEEEEEeecCCC
Confidence 7778888888 7776532221 112444456788887654443
No 148
>PF01913 FTR: Formylmethanofuran-tetrahydromethanopterin formyltransferase; InterPro: IPR022667 Formylmethanofuran:tetrahyromethanopterin formyltransferase (Ftr) is involved in C1 metabolism in methanogenic archaea, sulphate-reducing archaea and methylotrophic bacteria. It catalyses the following reversible reaction: N-formylmethanofuran + 5,6,7,8-tetrahydromethanopterin = methanofuran + 5-formyl-5,6,7,8-tetrahydromethanopterin Ftr from the thermophilic methanogen Methanopyrus kandleri (optimum growth temperature 98 degrees C) is a hyperthermophilic enzyme that is absolutely dependent on the presence of lyotropic salts for activity and thermostability. The crystal structure of Ftr, determined to a reveals a homotetramer composed essentially of two dimers. Each subunit is subdivided into two tightly associated lobes both consisting of a predominantly antiparallel beta sheet flanked by alpha helices forming an alpha/beta sandwich structure. The approximate location of the active site was detected in a region close to the dimer interface []. Ftr from the mesophilic methanogen Methanosarcina barkeri and the sulphate-reducing archaeon Archaeoglobus fulgidus have a similar structure []. In the methylotrophic bacterium Methylobacterium extorquens, Ftr interacts with three other polypeptides to form an Ftr/cyclohydrolase complex which catalyses the hydrolysis of formyl-tetrahydromethanopterin to formate during growth on C1 substrates [].; GO: 0016740 transferase activity, 0006730 one-carbon metabolic process; PDB: 1M5H_E 1M5S_C 1FTR_C 2FHJ_B 2FHK_D.
Probab=21.27 E-value=42 Score=33.33 Aligned_cols=20 Identities=40% Similarity=0.675 Sum_probs=14.6
Q ss_pred hhhhhhcccCccceeccCCcc
Q 004027 63 KVLRYFRKDGHNWRKKKDGKT 83 (778)
Q Consensus 63 ~~~~~fr~dg~~w~kkk~g~~ 83 (778)
+.|||| -|||.|.|+-+||.
T Consensus 119 ~~lr~F-GDG~q~sk~~~grr 138 (144)
T PF01913_consen 119 KKLRFF-GDGYQISKEIGGRR 138 (144)
T ss_dssp HHHHGG-GTT--EEEEETTEE
T ss_pred ccccCc-cCCceEEEEECCEE
Confidence 467886 69999999999964
No 149
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=20.23 E-value=1.6e+02 Score=31.74 Aligned_cols=46 Identities=17% Similarity=-0.065 Sum_probs=36.3
Q ss_pred CHhHHHHHHhCCC-Ccccc---cCCCCcHHHHHHHCCCHHHHHHHHhccC
Q 004027 725 YDWALEPTTVAGV-NINFR---DVNGWTALHWAAYCGRPNTCRSGFFHWT 770 (778)
Q Consensus 725 ~~~~Vk~LL~~GA-dvn~r---D~~G~TPLH~AA~~Gh~eiV~lLL~~~~ 770 (778)
...+++.+|.+|. +||.+ -+.|.|-|.-|..++..+++.+||.+.+
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 4567777788774 66643 5678899999999999999999988876
No 150
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=20.08 E-value=1.9e+02 Score=31.26 Aligned_cols=44 Identities=11% Similarity=-0.028 Sum_probs=35.2
Q ss_pred HHHHHHhCC-CCCCc---cCCCCccHHHHHHHcCCHhHHHHHHhCCCC
Q 004027 695 LVQKAAEGG-KGPCV---LDHCGQGVLHFAAALGYDWALEPTTVAGVN 738 (778)
Q Consensus 695 L~e~Lle~G-advN~---~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAd 738 (778)
+.+..+..| +++|. +-..|.|.|--|...+..+++.+||+.||-
T Consensus 232 vL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 232 VLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 344555555 56764 457899999999999999999999999984
Done!