Query 004027
Match_columns 778
No_of_seqs 394 out of 1899
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 11:54:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cxk_A Camta1, calmodulin bind 99.9 4.5E-26 1.5E-30 205.0 8.1 89 506-600 5-93 (95)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.6 4.2E-15 1.4E-19 128.7 11.3 89 681-770 4-92 (93)
3 4gpm_A Engineered protein OR26 99.6 1.3E-14 4.4E-19 141.5 11.4 93 678-771 69-161 (169)
4 4gpm_A Engineered protein OR26 99.5 2.9E-14 1E-18 139.0 12.5 94 678-772 36-129 (169)
5 3aaa_C Myotrophin, protein V-1 99.5 2.9E-14 9.9E-19 129.2 11.4 93 678-771 6-98 (123)
6 2zgd_A 3 repeat synthetic anky 99.5 1.8E-13 6.2E-18 122.6 11.5 86 679-765 24-109 (110)
7 2jab_A H10-2-G3; HER2, darpin, 99.5 2.1E-13 7.1E-18 125.9 12.2 90 678-768 46-135 (136)
8 3twr_A Tankyrase-2; ankyrin re 99.5 2E-13 6.7E-18 129.2 11.5 92 679-771 42-133 (165)
9 3c5r_A BARD-1, BRCA1-associate 99.5 2.3E-13 7.9E-18 125.3 10.5 93 679-772 10-102 (137)
10 2jab_A H10-2-G3; HER2, darpin, 99.4 3.2E-13 1.1E-17 124.6 11.2 93 678-771 13-105 (136)
11 3f6q_A Integrin-linked protein 99.4 3E-13 1E-17 130.1 11.4 94 678-772 38-131 (179)
12 3deo_A Signal recognition part 99.4 5.6E-13 1.9E-17 129.3 12.0 93 678-772 43-136 (183)
13 2l6b_A NR1C; ankyrin, consensu 99.4 1.4E-13 4.6E-18 123.1 7.0 93 680-773 10-102 (115)
14 1ycs_B 53BP2, P53BP2; ankyrin 99.4 3.7E-13 1.3E-17 136.3 11.0 93 679-772 37-129 (239)
15 1dcq_A PYK2-associated protein 99.4 5.7E-13 1.9E-17 139.5 12.3 94 678-772 168-264 (278)
16 1bd8_A P19INK4D CDK4/6 inhibit 99.4 3.8E-13 1.3E-17 125.8 9.2 86 681-768 70-155 (156)
17 3v30_A DNA-binding protein rfx 99.4 5.8E-13 2E-17 126.8 10.1 90 679-769 69-158 (172)
18 1d9s_A Cyclin-dependent kinase 99.4 2E-13 6.7E-18 126.1 6.5 92 677-770 43-135 (136)
19 1awc_B Protein (GA binding pro 99.4 9.4E-13 3.2E-17 123.4 11.2 88 681-769 36-123 (153)
20 1d9s_A Cyclin-dependent kinase 99.4 2.1E-13 7.2E-18 125.8 6.6 91 680-772 13-104 (136)
21 3ehr_A Osteoclast-stimulating 99.4 7.3E-13 2.5E-17 131.7 10.4 91 681-772 75-166 (222)
22 3ui2_A Signal recognition part 99.4 1E-12 3.5E-17 134.0 11.4 93 678-772 44-137 (244)
23 1n0r_A 4ANK, 4 ankyrin repeats 99.4 1.6E-12 5.4E-17 116.0 11.2 91 679-770 35-125 (126)
24 2vge_A RELA-associated inhibit 99.4 1.1E-12 3.9E-17 133.0 11.6 90 680-770 22-111 (229)
25 1bd8_A P19INK4D CDK4/6 inhibit 99.4 1.3E-12 4.4E-17 122.2 11.0 88 679-768 36-123 (156)
26 4b93_B Ankyrin repeat domain-c 99.4 1.2E-12 4.2E-17 136.1 11.6 92 680-772 120-211 (269)
27 1ihb_A P18-INK4C(INK6), cyclin 99.4 1.4E-12 4.7E-17 122.5 10.8 91 679-770 70-161 (162)
28 1dcq_A PYK2-associated protein 99.4 3.4E-12 1.2E-16 133.6 14.6 92 680-772 131-231 (278)
29 2y1l_E Darpin-8.4; hydrolase-i 99.4 2E-12 6.8E-17 123.4 11.7 86 682-768 50-135 (169)
30 3v31_A Ankyrin repeat family A 99.4 2.3E-12 7.8E-17 122.0 11.7 87 681-768 71-157 (167)
31 1ihb_A P18-INK4C(INK6), cyclin 99.4 1.1E-12 3.9E-17 123.0 8.6 91 679-771 38-128 (162)
32 2y1l_E Darpin-8.4; hydrolase-i 99.4 4E-12 1.4E-16 121.3 12.5 92 679-771 14-105 (169)
33 3v30_A DNA-binding protein rfx 99.4 2.2E-12 7.6E-17 122.7 10.7 93 679-772 36-128 (172)
34 1n0r_A 4ANK, 4 ankyrin repeats 99.4 3.1E-12 1E-16 114.1 10.7 90 681-771 4-93 (126)
35 4hbd_A KN motif and ankyrin re 99.4 1.7E-12 5.9E-17 134.7 10.4 91 679-770 183-274 (276)
36 2rfm_A Putative ankyrin repeat 99.3 2.8E-12 9.6E-17 124.4 11.2 89 679-768 101-189 (192)
37 1awc_B Protein (GA binding pro 99.3 3.1E-12 1.1E-16 119.9 11.0 86 679-765 67-152 (153)
38 1oy3_D Transcription factor in 99.3 2.1E-12 7.3E-17 131.0 10.6 94 679-773 158-252 (282)
39 2rfm_A Putative ankyrin repeat 99.3 2.6E-12 8.8E-17 124.7 10.7 93 679-772 68-160 (192)
40 3lvq_E ARF-GAP with SH3 domain 99.3 3.6E-12 1.2E-16 143.7 13.4 95 678-773 170-267 (497)
41 1s70_B 130 kDa myosin-binding 99.3 2.9E-12 1E-16 131.9 11.6 92 679-771 40-131 (299)
42 1bi7_B P16INK4A, MTS1, multipl 99.3 6.5E-13 2.2E-17 125.4 5.7 91 680-772 46-137 (156)
43 1bi7_B P16INK4A, MTS1, multipl 99.3 1E-12 3.5E-17 124.0 7.0 91 680-772 13-104 (156)
44 3twr_A Tankyrase-2; ankyrin re 99.3 4.7E-12 1.6E-16 119.6 11.0 95 678-772 7-101 (165)
45 3v31_A Ankyrin repeat family A 99.3 3.7E-12 1.3E-16 120.6 10.1 93 679-772 36-128 (167)
46 3f6q_A Integrin-linked protein 99.3 6.8E-12 2.3E-16 120.6 11.9 91 682-772 8-98 (179)
47 3utm_A Tankyrase-1; tankyrase, 99.3 6.9E-12 2.4E-16 130.7 12.1 94 677-771 56-149 (351)
48 2f8y_A Notch homolog 1, transl 99.3 6.3E-12 2.2E-16 123.8 10.9 94 679-773 125-218 (223)
49 1yyh_A HN1;, notch 1, ankyrin 99.3 3.7E-12 1.3E-16 129.3 9.3 92 678-770 156-247 (253)
50 3hra_A Ankyrin repeat family p 99.3 4.5E-12 1.5E-16 122.9 9.2 89 679-768 106-200 (201)
51 2b0o_E UPLC1; arfgap, structur 99.3 3.8E-12 1.3E-16 134.9 9.4 92 678-770 189-283 (301)
52 3lvq_E ARF-GAP with SH3 domain 99.3 3.5E-12 1.2E-16 143.8 9.6 66 708-773 166-234 (497)
53 3t8k_A Uncharacterized protein 99.3 1.9E-12 6.6E-17 127.8 5.8 89 679-767 38-141 (186)
54 3utm_A Tankyrase-1; tankyrase, 99.3 1.1E-11 3.6E-16 129.3 11.7 96 677-772 22-117 (351)
55 2f8y_A Notch homolog 1, transl 99.3 1.3E-11 4.3E-16 121.7 11.6 93 679-772 92-184 (223)
56 2xai_A ASB-9, ankyrin repeat a 99.3 9.2E-12 3.1E-16 127.2 10.9 91 679-771 36-126 (261)
57 3jxi_A Vanilloid receptor-rela 99.3 3.8E-12 1.3E-16 128.9 7.8 93 679-772 140-251 (260)
58 2dzn_A Probable 26S proteasome 99.3 1.2E-11 4.1E-16 122.0 11.2 91 679-770 107-199 (228)
59 1yyh_A HN1;, notch 1, ankyrin 99.3 1.1E-11 3.7E-16 125.9 11.0 94 679-773 124-217 (253)
60 3jxi_A Vanilloid receptor-rela 99.3 9.6E-12 3.3E-16 125.9 10.5 91 679-770 93-209 (260)
61 1wdy_A 2-5A-dependent ribonucl 99.3 1.3E-11 4.4E-16 124.6 11.1 97 678-774 181-281 (285)
62 2etb_A Transient receptor pote 99.3 5.1E-12 1.7E-16 127.9 7.9 92 679-771 136-246 (256)
63 1ikn_D Protein (I-kappa-B-alph 99.3 4.3E-12 1.5E-16 126.9 7.1 93 679-772 117-210 (236)
64 2etb_A Transient receptor pote 99.3 1.4E-11 4.8E-16 124.7 10.9 91 679-770 90-205 (256)
65 3hra_A Ankyrin repeat family p 99.3 1.6E-11 5.5E-16 119.0 10.9 110 659-769 19-129 (201)
66 3aji_A 26S proteasome non-ATPa 99.3 2E-11 7E-16 120.8 11.6 92 679-771 106-197 (231)
67 3aji_A 26S proteasome non-ATPa 99.3 1.4E-11 4.8E-16 122.0 10.4 91 679-770 73-163 (231)
68 2pnn_A Transient receptor pote 99.3 1.5E-11 5.3E-16 125.7 11.0 92 678-770 100-217 (273)
69 2rfa_A Transient receptor pote 99.3 1.2E-11 4E-16 122.9 9.8 92 679-771 121-222 (232)
70 1k1a_A B-cell lymphoma 3-encod 99.3 2.3E-11 7.9E-16 120.7 11.7 93 679-772 116-209 (241)
71 2rfa_A Transient receptor pote 99.3 1.8E-11 6.1E-16 121.6 10.8 93 678-771 74-183 (232)
72 1oy3_D Transcription factor in 99.2 7.1E-12 2.4E-16 127.1 8.0 92 679-771 9-103 (282)
73 4g8k_A 2-5A-dependent ribonucl 99.2 1.2E-11 4.3E-16 130.3 10.0 92 677-773 237-328 (337)
74 2pnn_A Transient receptor pote 99.2 7.5E-12 2.6E-16 128.1 8.1 92 679-771 148-258 (273)
75 3b7b_A Euchromatic histone-lys 99.2 2.1E-11 7.2E-16 121.2 10.9 93 679-772 111-203 (237)
76 1wdy_A 2-5A-dependent ribonucl 99.2 4E-11 1.4E-15 120.9 13.1 92 679-771 39-130 (285)
77 3deo_A Signal recognition part 99.2 1.5E-11 5.3E-16 119.1 9.6 90 678-768 75-181 (183)
78 3ljn_A Hypothetical protein; a 99.2 1.1E-11 3.6E-16 132.2 8.8 92 678-770 172-268 (364)
79 2vge_A RELA-associated inhibit 99.2 1.6E-11 5.4E-16 124.5 9.4 92 678-770 53-147 (229)
80 3d9h_A CDNA FLJ77766, highly s 99.2 2.7E-11 9.3E-16 125.9 10.7 90 679-770 92-181 (285)
81 3jue_A Arfgap with coiled-coil 99.2 2.6E-11 8.8E-16 132.9 10.9 92 677-769 233-324 (368)
82 1n11_A Ankyrin; clathrin, BAND 99.2 2.5E-11 8.5E-16 132.4 10.6 91 680-771 279-369 (437)
83 4hbd_A KN motif and ankyrin re 99.2 1.7E-11 5.9E-16 127.2 8.9 70 698-767 168-237 (276)
84 2dzn_A Probable 26S proteasome 99.2 4.7E-11 1.6E-15 117.7 11.5 90 679-769 72-163 (228)
85 2b0o_E UPLC1; arfgap, structur 99.2 3.5E-11 1.2E-15 127.4 11.3 91 680-771 152-251 (301)
86 3aaa_C Myotrophin, protein V-1 99.2 5.3E-11 1.8E-15 107.6 10.7 83 678-764 39-121 (123)
87 3jue_A Arfgap with coiled-coil 99.2 3.2E-11 1.1E-15 132.2 10.8 93 679-772 199-294 (368)
88 3kea_A K1L; tropism, ANK repea 99.2 1.2E-11 4E-16 128.8 7.0 92 679-771 62-154 (285)
89 2fo1_E LIN-12 protein; beta-ba 99.2 4.1E-11 1.4E-15 129.5 11.1 92 680-772 280-372 (373)
90 3ljn_A Hypothetical protein; a 99.2 2.6E-11 9E-16 129.2 9.2 93 680-773 139-238 (364)
91 1n0q_A 3ANK, 3 ankyrin repeats 99.2 3E-11 1E-15 104.3 7.8 60 712-771 1-60 (93)
92 3ehr_A Osteoclast-stimulating 99.2 9.2E-12 3.1E-16 123.8 5.0 94 678-772 105-199 (222)
93 3ui2_A Signal recognition part 99.2 3.1E-11 1.1E-15 123.0 9.0 89 679-768 77-182 (244)
94 1ikn_D Protein (I-kappa-B-alph 99.2 5.5E-11 1.9E-15 118.8 10.6 93 679-772 78-177 (236)
95 4g8k_A 2-5A-dependent ribonucl 99.2 5.2E-11 1.8E-15 125.5 10.8 83 692-774 218-301 (337)
96 1k1a_A B-cell lymphoma 3-encod 99.2 4.2E-11 1.4E-15 118.8 9.5 92 679-771 46-141 (241)
97 1ycs_B 53BP2, P53BP2; ankyrin 99.2 2.1E-11 7.1E-16 123.4 7.0 93 678-771 69-164 (239)
98 3c5r_A BARD-1, BRCA1-associate 99.2 5.3E-12 1.8E-16 116.1 2.3 89 679-768 43-131 (137)
99 1s70_B 130 kDa myosin-binding 99.2 8.6E-11 2.9E-15 120.9 11.6 62 711-772 197-258 (299)
100 4b93_B Ankyrin repeat domain-c 99.2 4.4E-11 1.5E-15 124.3 9.4 94 679-773 86-179 (269)
101 1n11_A Ankyrin; clathrin, BAND 99.2 4.4E-11 1.5E-15 130.4 9.8 94 679-773 47-140 (437)
102 2xai_A ASB-9, ankyrin repeat a 99.2 6.1E-11 2.1E-15 121.1 9.9 90 680-771 102-191 (261)
103 3b7b_A Euchromatic histone-lys 99.2 9.2E-11 3.1E-15 116.6 11.0 93 678-771 43-136 (237)
104 3kea_A K1L; tropism, ANK repea 99.1 4.1E-11 1.4E-15 124.7 7.9 92 678-771 94-186 (285)
105 3eu9_A Huntingtin-interacting 99.1 7.4E-11 2.5E-15 116.2 9.0 95 679-773 142-237 (240)
106 3t8k_A Uncharacterized protein 99.1 1.6E-11 5.5E-16 121.2 4.2 92 678-769 74-177 (186)
107 3muj_A Transcription factor CO 99.1 5E-10 1.7E-14 105.5 13.4 84 508-598 6-91 (138)
108 3d9h_A CDNA FLJ77766, highly s 99.1 1.7E-10 5.7E-15 120.0 10.8 91 679-771 157-247 (285)
109 1sw6_A Regulatory protein SWI6 99.1 5.2E-11 1.8E-15 126.6 6.5 86 683-769 101-190 (327)
110 2fo1_E LIN-12 protein; beta-ba 99.0 1.3E-10 4.6E-15 125.4 6.4 95 678-773 165-265 (373)
111 2zgd_A 3 repeat synthetic anky 99.0 2.8E-10 9.5E-15 101.7 7.1 67 706-772 17-83 (110)
112 3eu9_A Huntingtin-interacting 99.0 1.1E-09 3.8E-14 107.8 12.1 88 681-769 78-166 (240)
113 1sw6_A Regulatory protein SWI6 99.0 2.3E-10 7.8E-15 121.6 7.2 92 677-769 129-228 (327)
114 2l6b_A NR1C; ankyrin, consensu 99.0 4E-10 1.4E-14 100.3 6.4 64 708-771 4-67 (115)
115 2aja_A Ankyrin repeat family p 98.9 5E-10 1.7E-14 123.0 3.7 89 678-768 127-221 (376)
116 3mlp_A Transcription factor CO 98.8 1.1E-08 3.8E-13 108.7 9.0 86 507-599 231-318 (402)
117 2aja_A Ankyrin repeat family p 98.7 6.2E-09 2.1E-13 114.2 5.6 105 657-771 78-188 (376)
118 1uad_C RSEC5, exocyst complex 98.2 5.9E-06 2E-10 74.5 9.1 84 507-598 7-95 (99)
119 3tc9_A Hypothetical hydrolase; 97.9 2E-05 6.8E-10 87.4 9.9 88 504-598 14-106 (430)
120 3hrp_A Uncharacterized protein 97.7 5.4E-05 1.9E-09 83.1 9.1 88 504-598 14-105 (409)
121 3kya_A Putative phosphatase; s 97.7 4.4E-05 1.5E-09 86.9 8.2 88 504-598 14-104 (496)
122 2uzx_B Hepatocyte growth facto 97.6 4.5E-05 1.6E-09 90.6 6.9 92 507-598 541-636 (727)
123 2uzx_B Hepatocyte growth facto 97.5 1.8E-05 6.1E-10 94.0 -0.0 74 507-585 635-709 (727)
124 4hw6_A Hypothetical protein, I 97.4 0.00035 1.2E-08 77.6 9.8 89 504-598 16-108 (433)
125 2yrp_A Nuclear factor of activ 97.0 0.0021 7.3E-08 59.3 8.5 87 503-597 4-108 (114)
126 1ikn_C P50D, protein (NF-kappa 95.1 0.03 1E-06 52.1 6.1 84 508-598 4-106 (119)
127 1u36_A DNA-binding, nuclear fa 94.4 0.051 1.7E-06 49.6 5.7 83 508-597 4-105 (106)
128 1my7_A NF-kappab P65 (RELA) su 94.2 0.075 2.6E-06 49.0 6.4 89 508-598 4-101 (114)
129 1oy3_C Transcription factor P6 93.1 0.19 6.5E-06 47.6 7.1 89 508-598 4-101 (136)
130 1zk9_A Transcription factor RE 93.1 0.046 1.6E-06 50.1 2.9 88 508-597 13-109 (110)
131 3iag_C Recombining binding pro 92.9 0.17 6E-06 55.5 7.6 68 524-598 343-421 (422)
132 2v2t_A RELB, transcription fac 90.3 0.36 1.2E-05 51.1 6.4 85 506-597 189-287 (288)
133 3orj_A Sugar-binding protein; 89.1 0.59 2E-05 51.7 7.1 71 506-587 112-189 (439)
134 1p7h_L Nuclear factor of activ 88.6 0.49 1.7E-05 50.1 5.8 88 506-597 184-285 (286)
135 1nfk_A Protein (nuclear factor 88.6 0.54 1.9E-05 50.6 6.2 86 507-598 209-312 (325)
136 1svc_P Protein (nuclear factor 88.4 0.61 2.1E-05 50.8 6.5 86 507-598 249-352 (365)
137 1a3q_A Protein (nuclear factor 87.9 0.81 2.8E-05 48.4 6.9 83 508-596 186-284 (285)
138 1ikn_A P65, protein (NF-kappa- 87.8 0.99 3.4E-05 47.8 7.5 85 507-598 175-273 (286)
139 1imh_C NF-AT5, tonebp, nuclear 86.4 1.4 4.7E-05 46.6 7.6 88 506-597 180-280 (281)
140 2o61_A Transcription factor P6 85.4 1.2 4.2E-05 50.9 7.1 86 508-599 177-275 (540)
141 1gji_A C-REL protein, C-REL pr 83.8 1.9 6.7E-05 45.3 7.3 86 506-597 177-274 (275)
142 3brd_A LIN-12 and GLP-1 phenot 75.9 5 0.00017 44.9 7.5 82 508-597 376-474 (477)
143 2d9z_A Protein kinase C, NU ty 55.2 6.2 0.00021 37.0 2.6 29 101-131 12-40 (129)
144 3orj_A Sugar-binding protein; 43.9 17 0.00059 40.3 4.3 69 519-597 34-111 (439)
145 2ayd_A WRKY transcription fact 30.5 14 0.00048 31.6 0.8 9 69-77 14-22 (76)
146 1wj2_A Probable WRKY transcrip 29.7 14 0.00047 31.8 0.5 10 69-78 17-26 (78)
147 2coa_A Protein kinase C, D2 ty 25.1 53 0.0018 30.6 3.6 31 99-131 10-40 (125)
148 3oky_A Plexin-A2; transmembran 23.0 1.7E+02 0.0059 34.4 8.3 87 505-598 526-625 (681)
149 1qho_A Alpha-amylase; glycosid 20.8 1.3E+02 0.0046 34.8 6.9 66 507-580 498-563 (686)
No 1
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=99.92 E-value=4.5e-26 Score=205.02 Aligned_cols=89 Identities=36% Similarity=0.684 Sum_probs=82.0
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCCCCCcccEEEEeCCCc
Q 004027 506 QLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRL 585 (778)
Q Consensus 506 q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH~pG~VpL~Vtcsnr~ 585 (778)
-+++|+||+|+|||..|||||+|+|.||..+ ++|.||||+++||++++++|+|||++|||.||+|+|+|+|+++.
T Consensus 5 ~~~~Itd~sP~~gp~sGGTkv~I~G~~L~~g-----s~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~ 79 (95)
T 2cxk_A 5 SSGMVTDYSPEWSYPEGGVKVLITGPWQEAS-----NNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI 79 (95)
T ss_dssp CCSCCCEEECSEECTTCCCEEEEESSCCCCS-----SCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE
T ss_pred CcEEEEEECCCcccCCCCEEEEEEeECCCCC-----ccEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCee
Confidence 3679999999999999999999999999876 57999999999999999999999999999999999999999877
Q ss_pred ccccceeeeeccCCC
Q 004027 586 SCSEVREFEYRASHI 600 (778)
Q Consensus 586 ~cSEVr~FEYr~~~~ 600 (778)
+|++++||||+.+.
T Consensus 80 -~s~~~~FeY~~~Pt 93 (95)
T 2cxk_A 80 -ISNSVVFEYKSGPS 93 (95)
T ss_dssp -CSCCEEEEECCC--
T ss_pred -cCCceEEEEeCCCC
Confidence 59999999997653
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.60 E-value=4.2e-15 Score=128.72 Aligned_cols=89 Identities=24% Similarity=0.171 Sum_probs=82.8
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
+.|+.++..+..+.+. .|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 4 t~L~~A~~~~~~~~v~-~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~ 82 (93)
T 1n0q_A 4 TPLHLAARNGHLEVVK-LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82 (93)
T ss_dssp CHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cHHHHHHHcCCHHHHH-HHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 4688899888877665 888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccC
Q 004027 761 TCRSGFFHWT 770 (778)
Q Consensus 761 iV~lLL~~~~ 770 (778)
++++|+.+..
T Consensus 83 ~~~~Ll~~ga 92 (93)
T 1n0q_A 83 VVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999998754
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.55 E-value=1.3e-14 Score=141.53 Aligned_cols=93 Identities=17% Similarity=0.081 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.|+..+..+.+. .|++.|+++|.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|
T Consensus 69 ~g~TpLh~A~~~g~~~~v~-~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 69 DGRTPLHHAAENGHKEVVK-LLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 3456899999999887664 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCC
Q 004027 758 RPNTCRSGFFHWTQ 771 (778)
Q Consensus 758 h~eiV~lLL~~~~q 771 (778)
+.+||++|+++...
T Consensus 148 ~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 148 NEEVVKLLEKQGGW 161 (169)
T ss_dssp CHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCC
Confidence 99999999988753
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.54 E-value=2.9e-14 Score=138.95 Aligned_cols=94 Identities=19% Similarity=0.148 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.++..+..+.+. .+++.|++++.+|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|
T Consensus 36 ~g~t~l~~a~~~~~~~~~~-~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 36 DGRTPLHHAAENGHKEVVK-LLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 114 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 3456888999988877665 888999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCc
Q 004027 758 RPNTCRSGFFHWTQR 772 (778)
Q Consensus 758 h~eiV~lLL~~~~q~ 772 (778)
+.++|++||.+....
T Consensus 115 ~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 115 HKEVVKLLISKGADV 129 (169)
T ss_dssp CHHHHHHHHHTTCCT
T ss_pred CHHHHHHHHHcCCCc
Confidence 999999999886543
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.54 E-value=2.9e-14 Score=129.19 Aligned_cols=93 Identities=23% Similarity=0.102 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
..++.|+.++..+..+.+. .|++.|.+++..|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~-~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVK-DYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHH-HHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHH-HHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 4567899999999888765 788899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCC
Q 004027 758 RPNTCRSGFFHWTQ 771 (778)
Q Consensus 758 h~eiV~lLL~~~~q 771 (778)
+.++|++||.+...
T Consensus 85 ~~~~v~~Ll~~ga~ 98 (123)
T 3aaa_C 85 HVSCVKLLLSKGAD 98 (123)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999988654
No 6
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.48 E-value=1.8e-13 Score=122.61 Aligned_cols=86 Identities=19% Similarity=0.090 Sum_probs=80.5
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+||..|+.+++++|+.+|++++.+|..|+||||+|+..|+
T Consensus 24 g~t~L~~A~~~g~~~~v~-~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 102 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVR-ILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGN 102 (110)
T ss_dssp HHHHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHH-HHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCC
Confidence 567889999999888765 7888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004027 759 PNTCRSG 765 (778)
Q Consensus 759 ~eiV~lL 765 (778)
.+++++|
T Consensus 103 ~~~~~~L 109 (110)
T 2zgd_A 103 EDLAEIL 109 (110)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999986
No 7
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.48 E-value=2.1e-13 Score=125.88 Aligned_cols=90 Identities=18% Similarity=0.026 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.|+..+..+.+. .|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 46 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~ 124 (136)
T 2jab_A 46 YGLTPLYLATAHGHLEIVE-VLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNG 124 (136)
T ss_dssp TSCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCC
Confidence 3456788888877776654 777788888888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHhc
Q 004027 758 RPNTCRSGFFH 768 (778)
Q Consensus 758 h~eiV~lLL~~ 768 (778)
+.+++++|+.+
T Consensus 125 ~~~~~~~Ll~~ 135 (136)
T 2jab_A 125 NEDLAEILQKL 135 (136)
T ss_dssp CHHHHHHHHHC
T ss_pred CHHHHHHHHHc
Confidence 88888888764
No 8
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.47 E-value=2e-13 Score=129.20 Aligned_cols=92 Identities=21% Similarity=0.121 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.++..+..+.+. .|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 42 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 120 (165)
T 3twr_A 42 QSTPLHFAAGYNRVSVVE-YLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK 120 (165)
T ss_dssp CCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcChHHHHH-HHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 346899999999877765 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++++||.+...
T Consensus 121 ~~~v~~Ll~~ga~ 133 (165)
T 3twr_A 121 YEICKLLLQHGAD 133 (165)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999987654
No 9
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.45 E-value=2.3e-13 Score=125.27 Aligned_cols=93 Identities=22% Similarity=0.079 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 10 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 88 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVE-YLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGH 88 (137)
T ss_dssp CCCHHHHHHHHTCHHHHH-HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCC
Confidence 345889999988887765 7888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.+++++||.+....
T Consensus 89 ~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 89 VDIVKLLLSYGASR 102 (137)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999876543
No 10
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.45 E-value=3.2e-13 Score=124.62 Aligned_cols=93 Identities=22% Similarity=0.148 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.|++.+..+.+. .|++.|++++..|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 13 ~~~t~l~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVR-ILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cccHHHHHHHHhCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 4677899999999888765 888899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCC
Q 004027 758 RPNTCRSGFFHWTQ 771 (778)
Q Consensus 758 h~eiV~lLL~~~~q 771 (778)
+.++|++||.+...
T Consensus 92 ~~~~v~~Ll~~g~~ 105 (136)
T 2jab_A 92 HLEIAEVLLKHGAD 105 (136)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999987654
No 11
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.45 E-value=3e-13 Score=130.11 Aligned_cols=94 Identities=16% Similarity=0.095 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.|+..+..+.+. .|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 38 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 116 (179)
T 3f6q_A 38 HGFSPLHWACREGRSAVVE-MLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG 116 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 3456889999988877664 888899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCc
Q 004027 758 RPNTCRSGFFHWTQR 772 (778)
Q Consensus 758 h~eiV~lLL~~~~q~ 772 (778)
+.++|++||.+....
T Consensus 117 ~~~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 117 QDQVAEDLVANGALV 131 (179)
T ss_dssp CHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHCCCCc
Confidence 999999999886544
No 12
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.43 E-value=5.6e-13 Score=129.29 Aligned_cols=93 Identities=26% Similarity=0.224 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCccccc-CCCCcHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD-~~G~TPLH~AA~~ 756 (778)
...+.|+.++..+..+.+. .|++ |+++|.+|..|+||||+||..|+.+++++|+++|++++.+| ..|+||||+|+..
T Consensus 43 ~g~t~L~~A~~~g~~~~v~-~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 43 EYETPWWTAARKADEQALS-QLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHH-HHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 4567899999999888765 6666 88999999999999999999999999999999999999998 8999999999999
Q ss_pred CCHHHHHHHHhccCCc
Q 004027 757 GRPNTCRSGFFHWTQR 772 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q~ 772 (778)
|+.+++++||.+....
T Consensus 121 ~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 121 VRPEVVEALVELGADI 136 (183)
T ss_dssp TCHHHHHHHHHHTCCT
T ss_pred CcHHHHHHHHHcCCCC
Confidence 9999999999876543
No 13
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.43 E-value=1.4e-13 Score=123.06 Aligned_cols=93 Identities=19% Similarity=0.107 Sum_probs=85.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.+.|+.|+..+..+.+. .|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 10 ~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~ 88 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVK-KLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHH 88 (115)
T ss_dssp CCHHHHHHHHTCHHHHH-HHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCH
T ss_pred CCHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCH
Confidence 45788899988887765 88899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCcc
Q 004027 760 NTCRSGFFHWTQRN 773 (778)
Q Consensus 760 eiV~lLL~~~~q~~ 773 (778)
+++++|+.+....+
T Consensus 89 ~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 89 EIVKLLDAKGADVN 102 (115)
T ss_dssp HHHHHHHTTSSSHH
T ss_pred HHHHHHHHcCCCCC
Confidence 99999998876544
No 14
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.43 E-value=3.7e-13 Score=136.30 Aligned_cols=93 Identities=24% Similarity=0.230 Sum_probs=74.8
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|+++|..|..|+||||+||..|+.+++++|+.+|++++.+|..|+||||+|+..|+
T Consensus 37 ~~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQ-RIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN 115 (239)
T ss_dssp CHHHHHHHHHHTCHHHHH-HHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhHHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 356778888877776654 6777888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.++|++||.+....
T Consensus 116 ~~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 116 VQVCKFLVESGAAV 129 (239)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCc
Confidence 88888888776543
No 15
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.42 E-value=5.7e-13 Score=139.53 Aligned_cols=94 Identities=12% Similarity=0.004 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHh---chHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHH
Q 004027 678 VKEKLVQKLLKE---KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754 (778)
Q Consensus 678 ~~d~lL~~alk~---kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA 754 (778)
...+.||.|+.. +..+.+ +.|++.|+++|.+|..|+||||+||..|+.++|++||.+|++++.+|..|+||||+|+
T Consensus 168 ~g~t~Lh~A~~~~~~~~~~~v-~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 246 (278)
T 1dcq_A 168 PDETALHLAVRSVDRTSLHIV-DFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 246 (278)
T ss_dssp TTCBHHHHHHHHCCTTTHHHH-HHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcchHHHHhcccchHHHH-HHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHH
Confidence 356789999988 666655 5888999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHhccCCc
Q 004027 755 YCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 755 ~~Gh~eiV~lLL~~~~q~ 772 (778)
..|+.++|++|+.+.+.+
T Consensus 247 ~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 247 RLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HTTCHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCCCC
Confidence 999999999999987754
No 16
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.41 E-value=3.8e-13 Score=125.82 Aligned_cols=86 Identities=21% Similarity=0.131 Sum_probs=44.4
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++++|+.. ++++.+|..|+||||+|+..|+.+
T Consensus 70 t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~ 147 (156)
T 1bd8_A 70 SPVHDAARTGFLDTLK-VLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQD 147 (156)
T ss_dssp CHHHHHHHTTCHHHHH-HHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHH
T ss_pred CHHHHHHHcCcHHHHH-HHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHH
Confidence 3455555554444332 44455555555555555555555555555555555555 555555555555555555555555
Q ss_pred HHHHHHhc
Q 004027 761 TCRSGFFH 768 (778)
Q Consensus 761 iV~lLL~~ 768 (778)
++++|+.+
T Consensus 148 ~v~~Ll~~ 155 (156)
T 1bd8_A 148 LVDILQGH 155 (156)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 55555543
No 17
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.40 E-value=5.8e-13 Score=126.77 Aligned_cols=90 Identities=14% Similarity=0.047 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.++..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 69 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 69 RESALSLASTGGYTDIVG-LLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp CCCHHHHHHHTTCHHHHH-HHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHCCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCc
Confidence 345666677666665543 6666677777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHhcc
Q 004027 759 PNTCRSGFFHW 769 (778)
Q Consensus 759 ~eiV~lLL~~~ 769 (778)
.+++++|+.+.
T Consensus 148 ~~~~~~L~~~~ 158 (172)
T 3v30_A 148 RKVQQVIENHI 158 (172)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777776554
No 18
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.40 E-value=2e-13 Score=126.06 Aligned_cols=92 Identities=17% Similarity=0.060 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCC-CccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHH
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHC-GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~-GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~ 755 (778)
....+.|+.++. +..+.+. .|++.|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 43 ~~g~t~L~~A~~-~~~~~v~-~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 120 (136)
T 1d9s_A 43 RFGRRPIQVMMM-GSAQVAE-LLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120 (136)
T ss_dssp TTCCTTTTTSTT-SCHHHHH-HHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHH
T ss_pred CCCCCHHHHHHc-CCHHHHH-HHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 345667888888 7776654 888889999999999 9999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccC
Q 004027 756 CGRPNTCRSGFFHWT 770 (778)
Q Consensus 756 ~Gh~eiV~lLL~~~~ 770 (778)
.|+.+++++|+.+..
T Consensus 121 ~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 121 QGHRDIARYLHAATG 135 (136)
T ss_dssp HTCHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999998754
No 19
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.40 E-value=9.4e-13 Score=123.41 Aligned_cols=88 Identities=18% Similarity=0.088 Sum_probs=50.6
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
+.|+.|+..+..+.+. .|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 36 t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 114 (153)
T 1awc_B 36 SPLHLAAQYGHFSTTE-VLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQE 114 (153)
T ss_dssp CHHHHHHHHTCHHHHH-HHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 4555555555544433 555555555555555666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHhcc
Q 004027 761 TCRSGFFHW 769 (778)
Q Consensus 761 iV~lLL~~~ 769 (778)
++++|+.+.
T Consensus 115 ~v~~Ll~~g 123 (153)
T 1awc_B 115 VVELLIKYG 123 (153)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 666555543
No 20
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.40 E-value=2.1e-13 Score=125.83 Aligned_cols=91 Identities=16% Similarity=0.039 Sum_probs=83.8
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCC-CCcHHHHHHHCCC
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVN-GWTALHWAAYCGR 758 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~-G~TPLH~AA~~Gh 758 (778)
.+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+|+. |+.+++++|+++|++++.+|.. |+||||+|+..|+
T Consensus 13 ~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 90 (136)
T 1d9s_A 13 DAGLATAAARGQVETVR-QLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGF 90 (136)
T ss_dssp SCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTC
T ss_pred ccHHHHHHHcCCHHHHH-HHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCC
Confidence 45789999999887765 7888999999999999999999999 9999999999999999999999 9999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.+++++||.+....
T Consensus 91 ~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 91 LDTLVVLHRAGARL 104 (136)
T ss_dssp HHHHHHHHHTCCCC
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999876543
No 21
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.39 E-value=7.3e-13 Score=131.73 Aligned_cols=91 Identities=22% Similarity=0.211 Sum_probs=77.2
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhC-CCCcccccCCCCcHHHHHHHCCCH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~-GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+||..|+.++|++|+.. |++++.+|..|+||||+|+..|+.
T Consensus 75 t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~ 153 (222)
T 3ehr_A 75 NPLHEAAKRGNLSWLR-ECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYA 153 (222)
T ss_dssp CHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCH
T ss_pred cccccccccCcHHHHH-HHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCH
Confidence 4678888888777665 77788888888888999999999999999999999988 899999999999999999999999
Q ss_pred HHHHHHHhccCCc
Q 004027 760 NTCRSGFFHWTQR 772 (778)
Q Consensus 760 eiV~lLL~~~~q~ 772 (778)
++|++||.+....
T Consensus 154 ~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 154 DIVQLLLAKGART 166 (222)
T ss_dssp HHHHHHHHHTCCS
T ss_pred HHHHHHHHcCCCC
Confidence 9999988876543
No 22
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.39 E-value=1e-12 Score=133.98 Aligned_cols=93 Identities=26% Similarity=0.224 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCccccc-CCCCcHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD-~~G~TPLH~AA~~ 756 (778)
...+.|+.|++.+..+.+. .|++ |+++|.+|..|+||||+||..|+.++|++|+.+|++++.+| ..|+||||+|+..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~-~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALS-QLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHH-HTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 3567899999999888765 6667 89999999999999999999999999999999999999998 8899999999999
Q ss_pred CCHHHHHHHHhccCCc
Q 004027 757 GRPNTCRSGFFHWTQR 772 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q~ 772 (778)
|+.++|++||.+....
T Consensus 122 g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 122 VRPEVVEALVELGADI 137 (244)
T ss_dssp TCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHHCCCCC
Confidence 9999999999886543
No 23
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.39 E-value=1.6e-12 Score=115.98 Aligned_cols=91 Identities=23% Similarity=0.165 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.++..+..+.+. .|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 35 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 113 (126)
T 1n0r_A 35 GRTPLHLAARNGHLEVVK-LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 113 (126)
T ss_dssp SCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCcHHHHH-HHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCc
Confidence 455789999988887765 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccC
Q 004027 759 PNTCRSGFFHWT 770 (778)
Q Consensus 759 ~eiV~lLL~~~~ 770 (778)
.+++++|+.+..
T Consensus 114 ~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 114 LEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 999999998754
No 24
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.39 E-value=1.1e-12 Score=133.00 Aligned_cols=90 Identities=24% Similarity=0.233 Sum_probs=58.1
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 22 ~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~ 100 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQ-QAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDT 100 (229)
T ss_dssp HHHHHHHHHHTCHHHHH-HHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hHHHHHHHHcCCHHHHH-HHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 34566666666655544 55556666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHhccC
Q 004027 760 NTCRSGFFHWT 770 (778)
Q Consensus 760 eiV~lLL~~~~ 770 (778)
++|++||.+..
T Consensus 101 ~~v~~Ll~~ga 111 (229)
T 2vge_A 101 VICMALVQHGA 111 (229)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHHHHcCC
Confidence 66666665543
No 25
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.39 E-value=1.3e-12 Score=122.19 Aligned_cols=88 Identities=20% Similarity=0.179 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+. +..+..+.+. .|++.|++++..|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 36 g~t~L~~-~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 113 (156)
T 1bd8_A 36 GKTALQV-MMFGSTAIAL-ELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGH 113 (156)
T ss_dssp SCCHHHH-SCTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred CCcHHHH-HHcCCHHHHH-HHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhCh
Confidence 4567777 7777777654 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 004027 759 PNTCRSGFFH 768 (778)
Q Consensus 759 ~eiV~lLL~~ 768 (778)
.+++++|+.+
T Consensus 114 ~~~v~~Ll~~ 123 (156)
T 1bd8_A 114 TAVVSFLAAE 123 (156)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 9999999987
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=136.07 Aligned_cols=92 Identities=17% Similarity=0.064 Sum_probs=81.5
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.+.++.++..+..+.+ +.|++.|+++|.+|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+||..|+.
T Consensus 120 ~t~l~~a~~~~~~~~~-~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~ 198 (269)
T 4b93_B 120 AVPLHLACQQGHFQVV-KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV 198 (269)
T ss_dssp CCHHHHHHHHTCHHHH-HHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CCccccccccChHHHH-HHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCH
Confidence 4567778887777665 488899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCc
Q 004027 760 NTCRSGFFHWTQR 772 (778)
Q Consensus 760 eiV~lLL~~~~q~ 772 (778)
++|++||.+....
T Consensus 199 ~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 199 FVVELLLLHGASV 211 (269)
T ss_dssp HHHHHHHHTTCCS
T ss_pred HHHHHHHHCCCCC
Confidence 9999999886543
No 27
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.38 E-value=1.4e-12 Score=122.46 Aligned_cols=91 Identities=19% Similarity=0.061 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCC-cccccCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN-INFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAd-vn~rD~~G~TPLH~AA~~G 757 (778)
..+.|+.++..+..+.+. .|++.|++++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|
T Consensus 70 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 70 GFAVIHDAARAGFLDTLQ-TLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp SCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence 456889999988877665 88899999999999999999999999999999999999998 6999999999999999999
Q ss_pred CHHHHHHHHhccC
Q 004027 758 RPNTCRSGFFHWT 770 (778)
Q Consensus 758 h~eiV~lLL~~~~ 770 (778)
+.+++++|+.+.+
T Consensus 149 ~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 149 RNEVVSLMQANGA 161 (162)
T ss_dssp CHHHHHHHHHTC-
T ss_pred CHHHHHHHHHhCC
Confidence 9999999998764
No 28
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.37 E-value=3.4e-12 Score=133.61 Aligned_cols=92 Identities=14% Similarity=0.031 Sum_probs=81.0
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCC------ccCCCCccHHHHHHHc---CCHhHHHHHHhCCCCcccccCCCCcHH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPC------VLDHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTAL 750 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN------~~D~~GqTpLHlAA~l---G~~~~Vk~LL~~GAdvn~rD~~G~TPL 750 (778)
-..|+.+++.+..+.+. .++..|.+++ ..+..|+||||+||.. |+.+++++|+.+|+++|.+|..|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~-~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLL-QAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHH-HHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHH-HHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 34678888888887765 6778888854 4588999999999999 899999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHhccCCc
Q 004027 751 HWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 751 H~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
|+|+..|+.++|++||.+....
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~ 231 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASI 231 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999976643
No 29
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.37 E-value=2e-12 Score=123.42 Aligned_cols=86 Identities=22% Similarity=0.198 Sum_probs=41.1
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
.|+.|+..+..+.+. .|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 50 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 128 (169)
T 2y1l_E 50 PLHLAAFNGHLEIVE-VLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEI 128 (169)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 444444444443332 4444444444444444455555444444444444444444444444444455555554444444
Q ss_pred HHHHHhc
Q 004027 762 CRSGFFH 768 (778)
Q Consensus 762 V~lLL~~ 768 (778)
+++|+.+
T Consensus 129 v~~Ll~~ 135 (169)
T 2y1l_E 129 VEVLLKN 135 (169)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 4444444
No 30
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.37 E-value=2.3e-12 Score=122.04 Aligned_cols=87 Identities=11% Similarity=0.019 Sum_probs=44.3
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
+.|+.++..+..+.+. .|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 71 t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 149 (167)
T 3v31_A 71 SALSLACSKGYTDIVK-MLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS 149 (167)
T ss_dssp CHHHHHHHHTCHHHHH-HHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred cHHHHHHHcCCHHHHH-HHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 3445555544444332 444445555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHhc
Q 004027 761 TCRSGFFH 768 (778)
Q Consensus 761 iV~lLL~~ 768 (778)
++++|+.+
T Consensus 150 ~~~~L~~~ 157 (167)
T 3v31_A 150 VQQVIESH 157 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 31
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.36 E-value=1.1e-12 Score=123.03 Aligned_cols=91 Identities=22% Similarity=0.149 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.++. +..+.+. .|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 38 g~t~L~~A~~-~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 115 (162)
T 1ihb_A 38 GRTALQVMKL-GNPEIAR-RLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH 115 (162)
T ss_dssp SCCHHHHCCS-SCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHc-CcHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4567888888 7666654 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++++||.+...
T Consensus 116 ~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 116 LRVVEFLVKHTAS 128 (162)
T ss_dssp HHHHHHHHHHSCC
T ss_pred HHHHHHHHHccCC
Confidence 9999999988764
No 32
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.36 E-value=4e-12 Score=121.31 Aligned_cols=92 Identities=21% Similarity=0.093 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
....|+.|++.+..+.+. .|++.|++++..|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 14 ~~~~l~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 92 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVR-ILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGH 92 (169)
T ss_dssp HHHHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred ccchHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 466889999999888765 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++++|+.+...
T Consensus 93 ~~~~~~Ll~~g~~ 105 (169)
T 2y1l_E 93 LEIVEVLLKNGAD 105 (169)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999987644
No 33
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.36 E-value=2.2e-12 Score=122.72 Aligned_cols=93 Identities=18% Similarity=0.042 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 36 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 114 (172)
T 3v30_A 36 GFTPLIWASAFGEIETVR-FLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNH 114 (172)
T ss_dssp SCCHHHHHHHTTCHHHHH-HHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 456799999999887765 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.++|++||.+....
T Consensus 115 ~~~v~~Ll~~ga~~ 128 (172)
T 3v30_A 115 VKCVEALLARGADL 128 (172)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCc
Confidence 99999999876543
No 34
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.35 E-value=3.1e-12 Score=114.10 Aligned_cols=90 Identities=23% Similarity=0.172 Sum_probs=82.8
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHH
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPN 760 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~e 760 (778)
+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 4 t~L~~A~~~~~~~~v~-~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 82 (126)
T 1n0r_A 4 TPLHLAARNGHLEVVK-LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82 (126)
T ss_dssp CHHHHHHHHTCHHHHH-HHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cHHHHHHHcCcHHHHH-HHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHH
Confidence 4688899888887765 788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCC
Q 004027 761 TCRSGFFHWTQ 771 (778)
Q Consensus 761 iV~lLL~~~~q 771 (778)
++++|+.+...
T Consensus 83 ~~~~Ll~~g~~ 93 (126)
T 1n0r_A 83 VVKLLLEAGAD 93 (126)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 99999987543
No 35
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.35 E-value=1.7e-12 Score=134.74 Aligned_cols=91 Identities=15% Similarity=0.048 Sum_probs=84.8
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHh-CCCCcccccCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~-~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
..+.|+.|+..+..+.+. .|++.|+++|.+|..|+||||+||..|+.+++++|++ .|++++.+|..|+||||+|+..|
T Consensus 183 g~tpLh~A~~~g~~~~v~-~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVK-ALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAG 261 (276)
T ss_dssp CCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHH-HHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcC
Confidence 456899999999877664 8899999999999999999999999999999999999 89999999999999999999999
Q ss_pred CHHHHHHHHhccC
Q 004027 758 RPNTCRSGFFHWT 770 (778)
Q Consensus 758 h~eiV~lLL~~~~ 770 (778)
+.+++++||.+.+
T Consensus 262 ~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 262 QSEIASMLYSRMN 274 (276)
T ss_dssp CHHHHHHHHHHCC
T ss_pred CHHHHHHHHhccC
Confidence 9999999998864
No 36
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.35 E-value=2.8e-12 Score=124.41 Aligned_cols=89 Identities=18% Similarity=0.032 Sum_probs=74.0
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..|+
T Consensus 101 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSY-FLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR 179 (192)
T ss_dssp SCCHHHHHHHHTCHHHHH-HHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCc
Confidence 455788888877776654 7778888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhc
Q 004027 759 PNTCRSGFFH 768 (778)
Q Consensus 759 ~eiV~lLL~~ 768 (778)
.+++++|+.+
T Consensus 180 ~~~v~~Ll~~ 189 (192)
T 2rfm_A 180 QEVIKIFTEV 189 (192)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888888765
No 37
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.35 E-value=3.1e-12 Score=119.90 Aligned_cols=86 Identities=13% Similarity=0.012 Sum_probs=80.4
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 67 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVE-VLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp CCCHHHHHHHHTCHHHHH-HHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcChHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 456899999988877654 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004027 759 PNTCRSG 765 (778)
Q Consensus 759 ~eiV~lL 765 (778)
.+++++|
T Consensus 146 ~~i~~~L 152 (153)
T 1awc_B 146 EDLAEIL 152 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999986
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.35 E-value=2.1e-12 Score=130.99 Aligned_cols=94 Identities=19% Similarity=0.059 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCC-CccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHC-GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~-GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
..+.|+.|+..+..+.+. .|++.|++++..+.. |+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|
T Consensus 158 g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 158 GHTPLHVAVIHKDAEMVR-LLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp SCCHHHHHHHTTCHHHHH-HHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred CcCHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 346799999999877765 888999999998854 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCcc
Q 004027 758 RPNTCRSGFFHWTQRN 773 (778)
Q Consensus 758 h~eiV~lLL~~~~q~~ 773 (778)
+.++|++||.+....+
T Consensus 237 ~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 237 NPILARLLRAHGAPEP 252 (282)
T ss_dssp CHHHHHHHHHTTCCCC
T ss_pred CcHHHHHHHHcCCCcC
Confidence 9999999999877543
No 39
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.35 E-value=2.6e-12 Score=124.69 Aligned_cols=93 Identities=19% Similarity=0.118 Sum_probs=85.6
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..|+
T Consensus 68 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (192)
T 2rfm_A 68 GSTALIWAVKNNRLGIAE-KLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGR 146 (192)
T ss_dssp SCCHHHHHHHTTCHHHHH-HHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred CccHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 456899999999887765 7888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.+++++||.+....
T Consensus 147 ~~~v~~Ll~~ga~~ 160 (192)
T 2rfm_A 147 SEIVKKLLELGADI 160 (192)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHCCCCC
Confidence 99999999876543
No 40
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.34 E-value=3.6e-12 Score=143.68 Aligned_cols=95 Identities=15% Similarity=-0.031 Sum_probs=82.7
Q ss_pred HHHHHHHHHHH---hchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHH
Q 004027 678 VKEKLVQKLLK---EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754 (778)
Q Consensus 678 ~~d~lL~~alk---~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA 754 (778)
...+.||.|+. .+..+.+ +.|++.|+++|.+|..|+||||+||..|+.++|++||++||+++.+|..|+||||+|+
T Consensus 170 ~g~t~Lh~A~~~a~~g~~~~v-~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 248 (497)
T 3lvq_E 170 PEELVLHLAVKVANQASLPLV-DFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 248 (497)
T ss_dssp SCBCHHHHHHHTCCTTTHHHH-HHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHH
T ss_pred ccchHHHHHHHhcccccHHHH-HHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 45678999976 6766655 4888899999999999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHhccCCcc
Q 004027 755 YCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 755 ~~Gh~eiV~lLL~~~~q~~ 773 (778)
..|+.+++++|+.+....+
T Consensus 249 ~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 249 KKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HTTCHHHHHHHHHTCC---
T ss_pred HcCCHHHHHHHHHhCCCCC
Confidence 9999999999998877554
No 41
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.34 E-value=2.9e-12 Score=131.86 Aligned_cols=92 Identities=21% Similarity=0.144 Sum_probs=83.5
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|+++|..|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 40 ~~t~l~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVL-RLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp HHHHHHHHHHHTCHHHHH-HHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CccHHHHHHHcCCHHHHH-HHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 466889999999888765 7888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.++|++||.+...
T Consensus 119 ~~~v~~Ll~~g~~ 131 (299)
T 1s70_B 119 LDIAEYLISQGAH 131 (299)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCC
Confidence 9999999987653
No 42
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.34 E-value=6.5e-13 Score=125.37 Aligned_cols=91 Identities=19% Similarity=0.092 Sum_probs=79.0
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCcc-HHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQG-VLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqT-pLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
.+.|+.|+ .+..+.+ +.|++.|++++.+|..|+| |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 46 ~t~L~~A~-~~~~~~v-~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 123 (156)
T 1bi7_B 46 RRPIQVMM-MGSARVA-ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH 123 (156)
T ss_dssp CCTTTSSC-TTCHHHH-HHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred CCHHHHHH-cCCHHHH-HHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCH
Confidence 34566664 5555554 5889999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.+++++|+.+....
T Consensus 124 ~~~v~~Ll~~ga~~ 137 (156)
T 1bi7_B 124 RDVARYLRAAAGGT 137 (156)
T ss_dssp HHHHHHHSSCC---
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999886643
No 43
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.34 E-value=1e-12 Score=123.99 Aligned_cols=91 Identities=16% Similarity=0.059 Sum_probs=83.3
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCc-HHHHHHHCCC
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWT-ALHWAAYCGR 758 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~T-PLH~AA~~Gh 758 (778)
.+.|+.|+..+..+.+. .|++.|++++..|..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..|+
T Consensus 13 ~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~ 90 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVR-ALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF 90 (156)
T ss_dssp TTHHHHHHHHTCHHHHH-HHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred hHHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCC
Confidence 45889999999888765 788999999999999999999985 99999999999999999999999999 9999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.++|++||.+....
T Consensus 91 ~~~v~~Ll~~ga~~ 104 (156)
T 1bi7_B 91 LDTLVVLHRAGARL 104 (156)
T ss_dssp HHHHHHHHHHTCCS
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999886543
No 44
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.33 E-value=4.7e-12 Score=119.64 Aligned_cols=95 Identities=16% Similarity=0.059 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.|++.+..+.+...+...+.+++..+..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcC
Confidence 45678999999999888774433466778888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCc
Q 004027 758 RPNTCRSGFFHWTQR 772 (778)
Q Consensus 758 h~eiV~lLL~~~~q~ 772 (778)
+.+++++|+.+....
T Consensus 87 ~~~~v~~Ll~~g~~~ 101 (165)
T 3twr_A 87 HYEVAELLVKHGAVV 101 (165)
T ss_dssp CHHHHHHHHHTTCCT
T ss_pred cHHHHHHHHhCCCCC
Confidence 999999999876543
No 45
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.32 E-value=3.7e-12 Score=120.57 Aligned_cols=93 Identities=17% Similarity=0.095 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 36 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 114 (167)
T 3v31_A 36 GFTPLMWAAAHGQIAVVE-FLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNH 114 (167)
T ss_dssp SCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHCCCHHHHH-HHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCC
Confidence 456899999999877765 8888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.+++++|+.+....
T Consensus 115 ~~~v~~Ll~~g~~~ 128 (167)
T 3v31_A 115 VKCVKMLLESGADP 128 (167)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999876543
No 46
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.32 E-value=6.8e-12 Score=120.58 Aligned_cols=91 Identities=20% Similarity=0.083 Sum_probs=81.8
Q ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHH
Q 004027 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNT 761 (778)
Q Consensus 682 lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ei 761 (778)
.|+.|+..+..+.+...+...+.+++..|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 8 ~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 87 (179)
T 3f6q_A 8 DIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDI 87 (179)
T ss_dssp CHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 57788888988888744445577899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCc
Q 004027 762 CRSGFFHWTQR 772 (778)
Q Consensus 762 V~lLL~~~~q~ 772 (778)
|++||.+....
T Consensus 88 v~~Ll~~g~~~ 98 (179)
T 3f6q_A 88 VQKLLQYKADI 98 (179)
T ss_dssp HHHHHHTTCCT
T ss_pred HHHHHHcCCCC
Confidence 99999886543
No 47
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.31 E-value=6.9e-12 Score=130.75 Aligned_cols=94 Identities=21% Similarity=0.086 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
....+.|+.|+..+..+.+. .|++.|++++..|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 134 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQ-LLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASK 134 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHH-HHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 34567899999999887765 88899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCC
Q 004027 757 GRPNTCRSGFFHWTQ 771 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q 771 (778)
|+.+++++||.+...
T Consensus 135 ~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 135 NRVEVCSLLLSHGAD 149 (351)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999988654
No 48
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.30 E-value=6.3e-12 Score=123.82 Aligned_cols=94 Identities=12% Similarity=-0.145 Sum_probs=74.4
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 125 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 125 GKSALHWAAAVNNVDAAV-VLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp SCBHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 456778888777766654 6777788888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhccCCcc
Q 004027 759 PNTCRSGFFHWTQRN 773 (778)
Q Consensus 759 ~eiV~lLL~~~~q~~ 773 (778)
.+++++|+.+...+.
T Consensus 204 ~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 204 HDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHHHHHHTTCSSC
T ss_pred hHHHHHHHHcCCCcc
Confidence 888888887766554
No 49
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.30 E-value=3.7e-12 Score=129.35 Aligned_cols=92 Identities=11% Similarity=-0.113 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.|+..+..+.+. .|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 156 ~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 156 LGKSALHWAAAVNNVDAAV-VLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp TSCBHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcC
Confidence 3456778888777766554 777788888888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHhccC
Q 004027 758 RPNTCRSGFFHWT 770 (778)
Q Consensus 758 h~eiV~lLL~~~~ 770 (778)
|.+|+++|...+-
T Consensus 235 ~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 235 HHDIVRLLDLEHH 247 (253)
T ss_dssp CHHHHHHHHC---
T ss_pred CHHHHHHHHHHhh
Confidence 8888888766543
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.30 E-value=4.5e-12 Score=122.92 Aligned_cols=89 Identities=15% Similarity=0.034 Sum_probs=80.3
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCC-CCCCccCCCCccHHHHHHHcCC-----HhHHHHHHhCCCCcccccCCCCcHHHH
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGG-KGPCVLDHCGQGVLHFAAALGY-----DWALEPTTVAGVNINFRDVNGWTALHW 752 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~G-advN~~D~~GqTpLHlAA~lG~-----~~~Vk~LL~~GAdvn~rD~~G~TPLH~ 752 (778)
..+.|+.++..+..+.+. .|++.| ++++.+|..|+||||+|+..+. .+++++|+++|++++.+|..|+||||+
T Consensus 106 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 184 (201)
T 3hra_A 106 GGNALIPAAEKGHIDNVK-LLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDY 184 (201)
T ss_dssp SCCSHHHHHHTTCHHHHH-HHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHH-HHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHH
Confidence 456788999988887765 677766 8999999999999999999987 899999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHhc
Q 004027 753 AAYCGRPNTCRSGFFH 768 (778)
Q Consensus 753 AA~~Gh~eiV~lLL~~ 768 (778)
|+..|+.+++++|+.+
T Consensus 185 A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 185 ANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHTCHHHHHHHHTC
T ss_pred HHHcCCHhHHHHHHhc
Confidence 9999999999999875
No 51
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.30 E-value=3.8e-12 Score=134.91 Aligned_cols=92 Identities=16% Similarity=-0.024 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHh---chHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHH
Q 004027 678 VKEKLVQKLLKE---KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754 (778)
Q Consensus 678 ~~d~lL~~alk~---kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA 754 (778)
...+.||.|+.. +..+. ++.|++.|+++|.+|..|+||||+||..|+.+++++||++|++++.+|..|+||||+|+
T Consensus 189 ~g~t~Lh~A~~~~~~~~~~i-v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~ 267 (301)
T 2b0o_E 189 PEELVLHLAVKVANQASLPL-VDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 267 (301)
T ss_dssp CEECHHHHHHHTCCTTTHHH-HHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHhcccCcHHH-HHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 345688999886 55555 45888889999999999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHhccC
Q 004027 755 YCGRPNTCRSGFFHWT 770 (778)
Q Consensus 755 ~~Gh~eiV~lLL~~~~ 770 (778)
..|+.+++++|+.+..
T Consensus 268 ~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 268 KKHHKECEELLEQAQA 283 (301)
T ss_dssp HHTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHhcC
Confidence 9999999999998764
No 52
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.30 E-value=3.5e-12 Score=143.82 Aligned_cols=66 Identities=20% Similarity=0.147 Sum_probs=60.7
Q ss_pred ccCCCCccHHHHHHH---cCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCcc
Q 004027 708 VLDHCGQGVLHFAAA---LGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 708 ~~D~~GqTpLHlAA~---lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~~ 773 (778)
..+..|+||||+|+. .|+.++|++||++|+++|.+|..|+||||+||..|+.++|++||.+....+
T Consensus 166 ~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 234 (497)
T 3lvq_E 166 DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG 234 (497)
T ss_dssp SSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS
T ss_pred ccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 357899999999966 899999999999999999999999999999999999999999999876543
No 53
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.28 E-value=1.9e-12 Score=127.84 Aligned_cols=89 Identities=9% Similarity=-0.130 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhchHH---HHHHHHHhCCCCCCccCCCCccHHHHHHHcCC------HhHHHHHHhCCCCcccccCCCC-c
Q 004027 679 KEKLVQKLLKEKLQV---WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY------DWALEPTTVAGVNINFRDVNGW-T 748 (778)
Q Consensus 679 ~d~lL~~alk~kl~e---~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~------~~~Vk~LL~~GAdvn~rD~~G~-T 748 (778)
..++||.|+.++..+ .+++.|++.|+++|.+|..|+||||+|+..|+ .+++++||++|+++|.+|..|+ |
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tt 117 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIV 117 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBC
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCch
Confidence 345566666555332 23445666666666666666666666666654 3456666666666666666666 6
Q ss_pred HHHHHHHCCC-----HHHHHHHHh
Q 004027 749 ALHWAAYCGR-----PNTCRSGFF 767 (778)
Q Consensus 749 PLH~AA~~Gh-----~eiV~lLL~ 767 (778)
|||+|+..++ .+++++||.
T Consensus 118 pLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 118 VFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp TTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChhhHHHHHHHHHH
Confidence 6666666333 345666665
No 54
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.28 E-value=1.1e-11 Score=129.32 Aligned_cols=96 Identities=17% Similarity=0.068 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
....+.|+.+++.+..+.+...+...+.+++..|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 34567889999999998887666667899999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCCc
Q 004027 757 GRPNTCRSGFFHWTQR 772 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q~ 772 (778)
|+.++|++||.+....
T Consensus 102 g~~~iv~~Ll~~g~~~ 117 (351)
T 3utm_A 102 GHYEVTELLLKHGACV 117 (351)
T ss_dssp TCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHHCCCCC
Confidence 9999999999886543
No 55
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.28 E-value=1.3e-11 Score=121.69 Aligned_cols=93 Identities=20% Similarity=0.147 Sum_probs=85.6
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 92 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLE-DLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 170 (223)
T ss_dssp CCCHHHHHHHHTCHHHHH-HHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcHHHHHHHhCcHHHHH-HHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCC
Confidence 456889999988877665 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.+++++||.+....
T Consensus 171 ~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 171 YETAKVLLDHFANR 184 (223)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999986644
No 56
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.28 E-value=9.2e-12 Score=127.24 Aligned_cols=91 Identities=11% Similarity=-0.105 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.. ..|+||||+|+..|+
T Consensus 36 g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~ 113 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVK-ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGH 113 (261)
T ss_dssp CCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCc
Confidence 455777777777666544 667777777777777777777777777777777777777777643 447777777777777
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++++|+.+...
T Consensus 114 ~~~v~~Ll~~g~~ 126 (261)
T 2xai_A 114 VECVNSLIAYGGN 126 (261)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 7777777766543
No 57
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.28 E-value=3.8e-12 Score=128.87 Aligned_cols=93 Identities=14% Similarity=0.025 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhchHHHHHHHHHh---CCCCCCccCCCCccHHHHHHHcCC---------HhHHHHHHhCCCCc-------
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAE---GGKGPCVLDHCGQGVLHFAAALGY---------DWALEPTTVAGVNI------- 739 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle---~GadvN~~D~~GqTpLHlAA~lG~---------~~~Vk~LL~~GAdv------- 739 (778)
..+.|+.|+..+..+.+. .|++ .|++++.+|..|+||||+||..|+ .+++++|+.+|+++
T Consensus 140 g~tpL~~A~~~g~~~~v~-~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~ 218 (260)
T 3jxi_A 140 GELPLSLAACTNQPHIVH-YLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLE 218 (260)
T ss_dssp CSSHHHHHHHTTCHHHHH-HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGG
T ss_pred CCCHHHHHHHcCCHHHHH-HHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchh
Confidence 456899999999887765 7888 899999999999999999999888 79999999999999
Q ss_pred ccccCCCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 740 NFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 740 n~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
+.+|..|+||||+|+..|+.++|++||.+....
T Consensus 219 ~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 219 ALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 789999999999999999999999999987543
No 58
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.28 E-value=1.2e-11 Score=122.00 Aligned_cols=91 Identities=22% Similarity=0.135 Sum_probs=82.9
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCC-CCcccccCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~G-Advn~rD~~G~TPLH~AA~~G 757 (778)
..+.|+.++..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 107 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 107 GVTCLHLAVGKKWFEVSQ-FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp CCCHHHHHHHTTCHHHHH-HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHhHHH-HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcC
Confidence 456789999988877665 888999999999999999999999999999999999999 999999999999999999999
Q ss_pred CHHHHHHHH-hccC
Q 004027 758 RPNTCRSGF-FHWT 770 (778)
Q Consensus 758 h~eiV~lLL-~~~~ 770 (778)
+.++|++|| .+..
T Consensus 186 ~~~~v~~Ll~~~ga 199 (228)
T 2dzn_A 186 HGDAAVLLVEKYGA 199 (228)
T ss_dssp CHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHhcCC
Confidence 999999999 5544
No 59
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.28 E-value=1.1e-11 Score=125.95 Aligned_cols=94 Identities=20% Similarity=0.153 Sum_probs=85.7
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 124 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 124 GTTPLILAARLAVEGMLE-DLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 202 (253)
T ss_dssp CCCHHHHHHHHTCSSHHH-HHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCcHHHHHHHcChHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCC
Confidence 456888999888776654 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCcc
Q 004027 759 PNTCRSGFFHWTQRN 773 (778)
Q Consensus 759 ~eiV~lLL~~~~q~~ 773 (778)
.++|++||.+....+
T Consensus 203 ~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 203 YETAKVLLDHFANRD 217 (253)
T ss_dssp HHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHcCCCcc
Confidence 999999999876543
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.27 E-value=9.6e-12 Score=125.90 Aligned_cols=91 Identities=13% Similarity=0.086 Sum_probs=82.9
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccC--------------CCCccHHHHHHHcCCHhHHHHHHh---CCCCccc
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLD--------------HCGQGVLHFAAALGYDWALEPTTV---AGVNINF 741 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D--------------~~GqTpLHlAA~lG~~~~Vk~LL~---~GAdvn~ 741 (778)
..+.|+.|+..+..+.+. .|++.|++++..+ ..|+||||+||..|+.++|++|++ +|++++.
T Consensus 93 g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~ 171 (260)
T 3jxi_A 93 GQTALHIAIERRCKHYVE-LLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR 171 (260)
T ss_dssp SBCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc
Confidence 456899999999887765 8899999999988 689999999999999999999999 9999999
Q ss_pred ccCCCCcHHHHHHHCCC---------HHHHHHHHhccC
Q 004027 742 RDVNGWTALHWAAYCGR---------PNTCRSGFFHWT 770 (778)
Q Consensus 742 rD~~G~TPLH~AA~~Gh---------~eiV~lLL~~~~ 770 (778)
+|..|+||||+|+..|+ .+++++||.+..
T Consensus 172 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga 209 (260)
T 3jxi_A 172 QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCA 209 (260)
T ss_dssp CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCc
Confidence 99999999999999888 799999998744
No 61
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.27 E-value=1.3e-11 Score=124.60 Aligned_cols=97 Identities=15% Similarity=0.031 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhchH---HHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHh-CCCCcccccCCCCcHHHHH
Q 004027 678 VKEKLVQKLLKEKLQ---VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHWA 753 (778)
Q Consensus 678 ~~d~lL~~alk~kl~---e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~-~GAdvn~rD~~G~TPLH~A 753 (778)
...+.|+.++..+.. ..+.+.|++.|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|
T Consensus 181 ~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A 260 (285)
T 1wdy_A 181 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLA 260 (285)
T ss_dssp TSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHH
Confidence 345578888877761 334558899999999999999999999999999999999999 8999999999999999999
Q ss_pred HHCCCHHHHHHHHhccCCccc
Q 004027 754 AYCGRPNTCRSGFFHWTQRNC 774 (778)
Q Consensus 754 A~~Gh~eiV~lLL~~~~q~~c 774 (778)
+..|+.+++++|+.+....+|
T Consensus 261 ~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 261 VELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp HHTTCHHHHHHHHHHSSCSCC
T ss_pred HHcCcHHHHHHHHHcCCCCCc
Confidence 999999999999999876654
No 62
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.26 E-value=5.1e-12 Score=127.89 Aligned_cols=92 Identities=17% Similarity=0.025 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhchHHHHHHHHHh---CCCCCCccCCCCccHHHHHHH--cCCHh-------HHHHHHhCCCCc-------
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAE---GGKGPCVLDHCGQGVLHFAAA--LGYDW-------ALEPTTVAGVNI------- 739 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle---~GadvN~~D~~GqTpLHlAA~--lG~~~-------~Vk~LL~~GAdv------- 739 (778)
..+.|+.|+..+..+.+. .|++ .|+++|.+|..|+||||+||. .++.+ ++++|+++|+++
T Consensus 136 g~tpL~~A~~~~~~~~v~-~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~ 214 (256)
T 2etb_A 136 GELPLSLAACTKQWDVVT-YLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLE 214 (256)
T ss_dssp CSSHHHHHHHTTCHHHHH-HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGG
T ss_pred CCCHHHHHHHcCCHHHHH-HHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccc
Confidence 456899999999887765 7888 899999999999999999999 77887 999999999999
Q ss_pred ccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 740 NFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 740 n~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
+.+|..|+||||+|+..|+.++|++||++...
T Consensus 215 ~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 215 EISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 99999999999999999999999999988653
No 63
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.26 E-value=4.3e-12 Score=126.87 Aligned_cols=93 Identities=10% Similarity=-0.049 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCC-CCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDH-CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~-~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
..+.|+.|+..+..+.+. .|++.|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 117 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVE-LLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp CCCHHHHHHHTTCHHHHH-HHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccC
Confidence 345789999998877664 88899999999998 9999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCc
Q 004027 758 RPNTCRSGFFHWTQR 772 (778)
Q Consensus 758 h~eiV~lLL~~~~q~ 772 (778)
+.+++++|+.+.+..
T Consensus 196 ~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 196 STRIQQQLGQLTLEN 210 (236)
T ss_dssp CHHHHHHHHTTSCGG
T ss_pred chHHHHHHHHcchhh
Confidence 999999999987744
No 64
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.26 E-value=1.4e-11 Score=124.65 Aligned_cols=91 Identities=13% Similarity=-0.000 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCC-------------CccHHHHHHHcCCHhHHHHHHh---CCCCcccc
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHC-------------GQGVLHFAAALGYDWALEPTTV---AGVNINFR 742 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~-------------GqTpLHlAA~lG~~~~Vk~LL~---~GAdvn~r 742 (778)
..+.|+.|+..+..+.+. .|++.|++++..+.. |+||||+||..|+.+++++|++ +|++++.+
T Consensus 90 g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~ 168 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVK-LLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEAT 168 (256)
T ss_dssp TCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCcc
Confidence 456899999999887765 888999999998886 9999999999999999999999 99999999
Q ss_pred cCCCCcHHHHHHH--CCCHH-------HHHHHHhccC
Q 004027 743 DVNGWTALHWAAY--CGRPN-------TCRSGFFHWT 770 (778)
Q Consensus 743 D~~G~TPLH~AA~--~Gh~e-------iV~lLL~~~~ 770 (778)
|..|+||||+|+. .++.+ ++++||.+..
T Consensus 169 d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga 205 (256)
T 2etb_A 169 DSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA 205 (256)
T ss_dssp CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCC
Confidence 9999999999999 88888 9999998753
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.26 E-value=1.6e-11 Score=118.96 Aligned_cols=110 Identities=14% Similarity=-0.015 Sum_probs=89.2
Q ss_pred chHHHHHHhhcccCCChhHHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHH-hCCC
Q 004027 659 DDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTT-VAGV 737 (778)
Q Consensus 659 ~~w~~Llk~~~~~~~s~d~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL-~~GA 737 (778)
+....++..........+....+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|+ ..++
T Consensus 19 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~ 97 (201)
T 3hra_A 19 KKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAK-ALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATP 97 (201)
T ss_dssp HHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCc
Confidence 44455554333122222334567899999998877665 888999999999999999999999999999999999 6678
Q ss_pred CcccccCCCCcHHHHHHHCCCHHHHHHHHhcc
Q 004027 738 NINFRDVNGWTALHWAAYCGRPNTCRSGFFHW 769 (778)
Q Consensus 738 dvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~ 769 (778)
+++.+|..|+||||+|+..|+.+++++||.+.
T Consensus 98 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 129 (201)
T 3hra_A 98 DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129 (201)
T ss_dssp CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHC
T ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999999886
No 66
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.26 E-value=2e-11 Score=120.81 Aligned_cols=92 Identities=22% Similarity=0.137 Sum_probs=76.7
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.++..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..|+
T Consensus 106 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 106 GCTPLHYAASKNRHEIAV-MLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp SCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCC
Confidence 345788888888777654 7778888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++++||.+...
T Consensus 185 ~~~v~~Ll~~ga~ 197 (231)
T 3aji_A 185 VEEAKFLVTQGAS 197 (231)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCC
Confidence 8888888887554
No 67
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.26 E-value=1.4e-11 Score=121.98 Aligned_cols=91 Identities=18% Similarity=0.052 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 73 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 151 (231)
T 3aji_A 73 GWSPLHIAASAGXDEIVK-ALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGN 151 (231)
T ss_dssp SCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCHHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 345666666666655443 5666666777667777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHhccC
Q 004027 759 PNTCRSGFFHWT 770 (778)
Q Consensus 759 ~eiV~lLL~~~~ 770 (778)
.+++++|+.+..
T Consensus 152 ~~~v~~Ll~~g~ 163 (231)
T 3aji_A 152 LKMVHILLFYKA 163 (231)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHhcCC
Confidence 777777666543
No 68
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.26 E-value=1.5e-11 Score=125.73 Aligned_cols=92 Identities=14% Similarity=0.047 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCC--------------CCccHHHHHHHcCCHhHHHHHHh---CCCCcc
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDH--------------CGQGVLHFAAALGYDWALEPTTV---AGVNIN 740 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~--------------~GqTpLHlAA~lG~~~~Vk~LL~---~GAdvn 740 (778)
...+.|+.|+..+..+.+. .|++.|++++..+. .|+||||+||..|+.+++++|++ +|++++
T Consensus 100 ~g~tpL~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~ 178 (273)
T 2pnn_A 100 KGQTALHIAIERRNMTLVT-LLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS 178 (273)
T ss_dssp TTCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce
Confidence 3556899999999887765 88899999999887 79999999999999999999999 999999
Q ss_pred cccCCCCcHHHHHHHCCC---------HHHHHHHHhccC
Q 004027 741 FRDVNGWTALHWAAYCGR---------PNTCRSGFFHWT 770 (778)
Q Consensus 741 ~rD~~G~TPLH~AA~~Gh---------~eiV~lLL~~~~ 770 (778)
.+|..|+||||+|+..|+ .+++++||.+..
T Consensus 179 ~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga 217 (273)
T 2pnn_A 179 ARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA 217 (273)
T ss_dssp CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhh
Confidence 999999999999999999 899999998653
No 69
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.25 E-value=1.2e-11 Score=122.88 Aligned_cols=92 Identities=13% Similarity=-0.056 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHH----HHHHhCCCCc------ccccCCCCc
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWAL----EPTTVAGVNI------NFRDVNGWT 748 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~V----k~LL~~GAdv------n~rD~~G~T 748 (778)
..+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++ ++|+..|+++ +.+|..|+|
T Consensus 121 g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~t 199 (232)
T 2rfa_A 121 GEHPLSFAACVGSEEIVR-LLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLT 199 (232)
T ss_dssp CSSHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCC
Confidence 456899999998877765 88899999999999999999999999999988 9999999998 689999999
Q ss_pred HHHHHHHCCCHHHHHHHHhccCC
Q 004027 749 ALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 749 PLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
|||+|+..|+.++|++||++...
T Consensus 200 pl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 200 PFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCcc
Confidence 99999999999999999988653
No 70
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.25 E-value=2.3e-11 Score=120.72 Aligned_cols=93 Identities=18% Similarity=0.059 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccC-CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D-~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
..+.|+.++..+..+.+. .|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 116 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 116 GLTALHVAVNTECQETVQ-LLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp SCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHH-HHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 445788888888777654 8888899999888 78999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCc
Q 004027 758 RPNTCRSGFFHWTQR 772 (778)
Q Consensus 758 h~eiV~lLL~~~~q~ 772 (778)
+.+++++||.+....
T Consensus 195 ~~~~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 195 LLPLVRTLVRSGADS 209 (241)
T ss_dssp CHHHHHHHHHTTCCT
T ss_pred CHHHHHHHHhcCCCC
Confidence 999999999876543
No 71
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.25 E-value=1.8e-11 Score=121.59 Aligned_cols=93 Identities=15% Similarity=0.050 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCC-------------CCccHHHHHHHcCCHhHHHHHHhCCCCcccccC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDH-------------CGQGVLHFAAALGYDWALEPTTVAGVNINFRDV 744 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~-------------~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~ 744 (778)
...+.|+.|+..+..+.+. .|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 74 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 152 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVR-ALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS 152 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcCHHHHHHHcCCHHHHH-HHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 3456899999999887765 88899999988765 799999999999999999999999999999999
Q ss_pred CCCcHHHHHHHCCCHHHH----HHHHhccCC
Q 004027 745 NGWTALHWAAYCGRPNTC----RSGFFHWTQ 771 (778)
Q Consensus 745 ~G~TPLH~AA~~Gh~eiV----~lLL~~~~q 771 (778)
.|+||||+|+..|+.+++ ++|+.+...
T Consensus 153 ~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 153 LGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 999999999999999988 898887653
No 72
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.25 E-value=7.1e-12 Score=127.14 Aligned_cols=92 Identities=21% Similarity=0.164 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCC---CCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHH
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKG---PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~Gad---vN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~ 755 (778)
..+.||.|+..+..+.+. .|++.|++ ++.++..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 9 g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLD-FLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACR 87 (282)
T ss_dssp CCCHHHHHHHTTCHHHHH-HHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHH-HHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 345899999999887765 77877777 78899999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccCC
Q 004027 756 CGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 756 ~Gh~eiV~lLL~~~~q 771 (778)
.|+.+++++||.+...
T Consensus 88 ~~~~~~v~~Ll~~~~~ 103 (282)
T 1oy3_D 88 VRAHTCACVLLQPRPS 103 (282)
T ss_dssp TTCHHHHHHHSSSCCS
T ss_pred cCCcchhHhhhccCCC
Confidence 9999999999987643
No 73
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.25 E-value=1.2e-11 Score=130.30 Aligned_cols=92 Identities=12% Similarity=-0.028 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
....+.||.++..+..+.+..++...|+++|.+|..|+||||+||..|+.++|++||++||++|.+ ||||+|+..
T Consensus 237 ~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~ 311 (337)
T 4g8k_A 237 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRN 311 (337)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHT
T ss_pred CCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHc
Confidence 344567888888887777653333457888888888888888888888888888888888887654 588888888
Q ss_pred CCHHHHHHHHhccCCcc
Q 004027 757 GRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q~~ 773 (778)
|+.+||++||.+.+..+
T Consensus 312 ~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 312 YDHSLVKVLLSHGAKED 328 (337)
T ss_dssp TCHHHHHHHHHTTCCC-
T ss_pred CCHHHHHHHHHCcCCCC
Confidence 88888888888876543
No 74
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.25 E-value=7.5e-12 Score=128.05 Aligned_cols=92 Identities=14% Similarity=0.061 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHh---CCCCCCccCCCCccHHHHHHHcCC---------HhHHHHHHhCCCCcc------
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAE---GGKGPCVLDHCGQGVLHFAAALGY---------DWALEPTTVAGVNIN------ 740 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle---~GadvN~~D~~GqTpLHlAA~lG~---------~~~Vk~LL~~GAdvn------ 740 (778)
..+.|+.|+..+..+.+. .|++ .|++++.+|..|+||||+||..|+ .+++++|+.+|++++
T Consensus 148 g~tpL~~A~~~g~~~~v~-~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~ 226 (273)
T 2pnn_A 148 GELPLSLAACTNQLAIVK-FLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLE 226 (273)
T ss_dssp CBSHHHHHHHTTCHHHHH-HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGG
T ss_pred CCCHHHHHHHcCCHHHHH-HHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccc
Confidence 456899999999887765 7888 899999999999999999999998 799999999999997
Q ss_pred -cccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 741 -FRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 741 -~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
.+|..|+||||+|+..|+.++|++||.+...
T Consensus 227 ~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 227 EITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred cccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 4999999999999999999999999999874
No 75
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.24 E-value=2.1e-11 Score=121.20 Aligned_cols=93 Identities=17% Similarity=-0.011 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.++..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 111 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 189 (237)
T 3b7b_A 111 GWTPMIWATEYKHVDLVK-LLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENR 189 (237)
T ss_dssp SCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 445788888888777654 7888899999899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.+++++|+.+....
T Consensus 190 ~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 190 YDCVVLFLSRDSDV 203 (237)
T ss_dssp HHHHHHHHTTTCCT
T ss_pred HhHHHHHHHcCCCC
Confidence 99999998876543
No 76
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.24 E-value=4e-11 Score=120.93 Aligned_cols=92 Identities=17% Similarity=0.119 Sum_probs=85.0
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 39 g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 117 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVE-LLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 117 (285)
T ss_dssp CCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHH-HHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC
Confidence 456899999999887765 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.+++++|+.+...
T Consensus 118 ~~~~~~Ll~~g~~ 130 (285)
T 1wdy_A 118 VKALKFLYKRGAN 130 (285)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999987653
No 77
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.24 E-value=1.5e-11 Score=119.14 Aligned_cols=90 Identities=21% Similarity=0.077 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccC-CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D-~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
...+.||.|+..+..+.+. .|++.|+++|.++ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 75 ~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 75 NGRTALLFVAGLGSDKCVR-LLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp TSCCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 3556899999999887664 8899999999988 8899999999999999999999999999999999999999998876
Q ss_pred ----------------CCHHHHHHHHhc
Q 004027 757 ----------------GRPNTCRSGFFH 768 (778)
Q Consensus 757 ----------------Gh~eiV~lLL~~ 768 (778)
|+.+++++|..+
T Consensus 154 ~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 154 LKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 677777777654
No 78
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.23 E-value=1.1e-11 Score=132.21 Aligned_cols=92 Identities=11% Similarity=0.046 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCC-----CCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHH
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKG-----PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHW 752 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~Gad-----vN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~ 752 (778)
...+.|+.|+..+..+.+. .|++.|++ +|..|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+
T Consensus 172 ~g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 250 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALD-LMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYL 250 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 3456899999999887765 88888888 99999999999999999999999999999999999999999999999
Q ss_pred HHHCCCHHHHHHHHhccC
Q 004027 753 AAYCGRPNTCRSGFFHWT 770 (778)
Q Consensus 753 AA~~Gh~eiV~lLL~~~~ 770 (778)
|+..|+.++|++||.+..
T Consensus 251 A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 251 SVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp HHHTCCHHHHHHHHHHSC
T ss_pred HHHhChHHHHHHHHHcCC
Confidence 999999999999999854
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.23 E-value=1.6e-11 Score=124.52 Aligned_cols=92 Identities=14% Similarity=-0.070 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCccccc-CCCCcHHHHH--H
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWA--A 754 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD-~~G~TPLH~A--A 754 (778)
...+.|+.|+..+..+.+. .|++.|+++|..|..|+||||+||..|+.+++++|+++|++++.+| ..|+||||+| +
T Consensus 53 ~g~tpLh~A~~~g~~~~v~-~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~ 131 (229)
T 2vge_A 53 EGITALHNAICGANYSIVD-FLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPY 131 (229)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHH
Confidence 3567899999999887765 8889999999999999999999999999999999999999999997 6999999999 9
Q ss_pred HCCCHHHHHHHHhccC
Q 004027 755 YCGRPNTCRSGFFHWT 770 (778)
Q Consensus 755 ~~Gh~eiV~lLL~~~~ 770 (778)
..|+.+++++||.+..
T Consensus 132 ~~~~~~~v~~Ll~~ga 147 (229)
T 2vge_A 132 REGYADCATYLADVEQ 147 (229)
T ss_dssp STTHHHHHHHHHHHHH
T ss_pred hcChHHHHHHHHHcCC
Confidence 9999999999998753
No 80
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.22 E-value=2.7e-11 Score=125.92 Aligned_cols=90 Identities=11% Similarity=-0.103 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|+||||+|+..|+.+++++|++.|++++..+ .|+||||+|+..|+
T Consensus 92 g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVK-ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGH 169 (285)
T ss_dssp CCCHHHHHHHTTCHHHHH-HHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTC
T ss_pred CCCHHHHHHHCCcHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCC
Confidence 345666666666555443 5566666666666666666666666666666666666666666443 36666666666666
Q ss_pred HHHHHHHHhccC
Q 004027 759 PNTCRSGFFHWT 770 (778)
Q Consensus 759 ~eiV~lLL~~~~ 770 (778)
.+++++||.+..
T Consensus 170 ~~~v~~Ll~~g~ 181 (285)
T 3d9h_A 170 VECVNSLIAYGG 181 (285)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
Confidence 666666665543
No 81
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.22 E-value=2.6e-11 Score=132.87 Aligned_cols=92 Identities=16% Similarity=0.077 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
....+.||.|+..+..+.+. .|++.|+++|..|..|+||||+|+..|+.+++++||.+|++++.+|..|+||||+|+..
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~-~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACE-FLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCCCHHHHHHHCCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHC
Confidence 34567899999998877664 88899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcc
Q 004027 757 GRPNTCRSGFFHW 769 (778)
Q Consensus 757 Gh~eiV~lLL~~~ 769 (778)
|+.+||++|+...
T Consensus 312 g~~~iv~lLl~~~ 324 (368)
T 3jue_A 312 ANADIVTLLRLAK 324 (368)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcC
Confidence 9999999998764
No 82
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.21 E-value=2.5e-11 Score=132.35 Aligned_cols=91 Identities=15% Similarity=0.034 Sum_probs=60.5
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.+.|+.++..+..+.+. .|++.|++++..+..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 279 ~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~ 357 (437)
T 1n11_A 279 LTPLHLVAQEGHVPVAD-VLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 357 (437)
T ss_dssp CCHHHHHHHHTCHHHHH-HHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCHHHHHHHcCCHHHHH-HHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChH
Confidence 34566666666555443 56666666666666777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHhccCC
Q 004027 760 NTCRSGFFHWTQ 771 (778)
Q Consensus 760 eiV~lLL~~~~q 771 (778)
++|++||.+...
T Consensus 358 ~iv~~Ll~~ga~ 369 (437)
T 1n11_A 358 DIVTLLLKNGAS 369 (437)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHCcCC
Confidence 777776665443
No 83
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.21 E-value=1.7e-11 Score=127.16 Aligned_cols=70 Identities=20% Similarity=0.150 Sum_probs=64.3
Q ss_pred HHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHh
Q 004027 698 KAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFF 767 (778)
Q Consensus 698 ~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~ 767 (778)
.|++.|..++..+..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++|++||.
T Consensus 168 ~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 168 QLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp HHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 5556666666677789999999999999999999999999999999999999999999999999999998
No 84
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.21 E-value=4.7e-11 Score=117.72 Aligned_cols=90 Identities=12% Similarity=-0.072 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCC--CCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGG--KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~G--advN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
..+.|+.|+..+..+.+. .|++.| ++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 72 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 150 (228)
T 2dzn_A 72 GWTPFHIACSVGNLEVVK-SLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV 150 (228)
T ss_dssp SCCHHHHHHHHCCHHHHH-HHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHH-HHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 456899999998877665 788888 88999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcc
Q 004027 757 GRPNTCRSGFFHW 769 (778)
Q Consensus 757 Gh~eiV~lLL~~~ 769 (778)
|+.+++++||.+.
T Consensus 151 ~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 151 GSLKLIELLCGLG 163 (228)
T ss_dssp TCHHHHHHHHTTT
T ss_pred CCHHHHHHHHhcC
Confidence 9999999999887
No 85
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.21 E-value=3.5e-11 Score=127.42 Aligned_cols=91 Identities=16% Similarity=0.134 Sum_probs=82.3
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCc------cCCCCccHHHHHHHc---CCHhHHHHHHhCCCCcccccCCCCcHH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCV------LDHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTAL 750 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~------~D~~GqTpLHlAA~l---G~~~~Vk~LL~~GAdvn~rD~~G~TPL 750 (778)
...|+.|+..+..+.+. .++..|++++. .+..|+||||+||.. |+.+++++||..|+++|.+|..|+|||
T Consensus 152 ~~~L~~A~~~g~~~~v~-~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVL-EAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp HHHHHHHHHTTCHHHHH-HHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred HHHHhhhhhccCHHHHH-HHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 34688888888888776 67789999997 689999999999997 899999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHhccCC
Q 004027 751 HWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 751 H~AA~~Gh~eiV~lLL~~~~q 771 (778)
|+|+..|+.++|++||.+...
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad 251 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRAL 251 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999988654
No 86
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.21 E-value=5.3e-11 Score=107.58 Aligned_cols=83 Identities=13% Similarity=-0.079 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
...+.|+.|+..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 39 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~-- 115 (123)
T 3aaa_C 39 GGRKPLHYAADCGQLEILE-FLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN-- 115 (123)
T ss_dssp TSSCHHHHHHHTTCHHHHH-HHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC--
T ss_pred CCCcHHHHHHHcCCHHHHH-HHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC--
Confidence 3456899999999887764 8889999999999999999999999999999999999999999999999999999943
Q ss_pred CHHHHHH
Q 004027 758 RPNTCRS 764 (778)
Q Consensus 758 h~eiV~l 764 (778)
.+++++
T Consensus 116 -~~~~~l 121 (123)
T 3aaa_C 116 -QAIKAL 121 (123)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 444444
No 87
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.20 E-value=3.2e-11 Score=132.17 Aligned_cols=93 Identities=18% Similarity=0.040 Sum_probs=84.9
Q ss_pred HHHHHHHHHHh-chHHHHHHHHHhCCCCCCccC--CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHH
Q 004027 679 KEKLVQKLLKE-KLQVWLVQKAAEGGKGPCVLD--HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (778)
Q Consensus 679 ~d~lL~~alk~-kl~e~L~e~Lle~GadvN~~D--~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~ 755 (778)
..++|+.|+.. +..+.+. .|++.|+++|..+ ..|.||||+||..|+.++|++||.+|+++|.+|..|+||||+|+.
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~-~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMA-DALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHH-HHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHH-HHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 35789999988 8777765 7889999999988 899999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCc
Q 004027 756 CGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 756 ~Gh~eiV~lLL~~~~q~ 772 (778)
.|+.++|++||.+....
T Consensus 278 ~g~~~~v~~LL~~Gad~ 294 (368)
T 3jue_A 278 LGHTGLACLFLKRGADL 294 (368)
T ss_dssp HTCHHHHHHHHHTTCCT
T ss_pred cCcHHHHHHHHHCcCCC
Confidence 99999999999886543
No 88
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.20 E-value=1.2e-11 Score=128.84 Aligned_cols=92 Identities=12% Similarity=0.000 Sum_probs=75.7
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCC-CcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNG-WTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G-~TPLH~AA~~G 757 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|+||||+||..|+.+++++|+++|++++.+|..| .||||+|+..|
T Consensus 62 g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~ 140 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVK-ILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN 140 (285)
T ss_dssp TCCHHHHHTTSSSCHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcC
Confidence 356788888877766654 7778888888888888888888888888888888888888888888888 58888888888
Q ss_pred CHHHHHHHHhccCC
Q 004027 758 RPNTCRSGFFHWTQ 771 (778)
Q Consensus 758 h~eiV~lLL~~~~q 771 (778)
+.+++++|+.+...
T Consensus 141 ~~~~v~~Ll~~g~~ 154 (285)
T 3kea_A 141 DVSIVSYFLSEIPS 154 (285)
T ss_dssp CHHHHHHHHTTSCT
T ss_pred CHHHHHHHHhCCCc
Confidence 88888888877653
No 89
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.20 E-value=4.1e-11 Score=129.46 Aligned_cols=92 Identities=14% Similarity=-0.026 Sum_probs=82.1
Q ss_pred HHHHHHHHHhchHHHHHHHHHh-CCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAE-GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle-~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
.+.|+.|+..+..+.+. .|++ .+++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..||
T Consensus 280 ~t~Lh~A~~~g~~~~v~-~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~ 358 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVK-YLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNH 358 (373)
T ss_dssp CCTHHHHHSSCCHHHHH-HHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTC
T ss_pred CCHHHHHHHhCCHHHHH-HHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCC
Confidence 45799999999888776 5554 559999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCc
Q 004027 759 PNTCRSGFFHWTQR 772 (778)
Q Consensus 759 ~eiV~lLL~~~~q~ 772 (778)
.+||++|+.+...+
T Consensus 359 ~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 359 HNIVDIFDRCRPER 372 (373)
T ss_dssp HHHHHHHHTTC---
T ss_pred HHHHHHHHhcCccc
Confidence 99999999886654
No 90
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.19 E-value=2.6e-11 Score=129.19 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=84.8
Q ss_pred HHHHHHHHHhc--hHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCC-----cccccCCCCcHHHH
Q 004027 680 EKLVQKLLKEK--LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN-----INFRDVNGWTALHW 752 (778)
Q Consensus 680 d~lL~~alk~k--l~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAd-----vn~rD~~G~TPLH~ 752 (778)
.+.|+.|+..+ ..+.+. .|++.|++++..|..|+||||+||..|+.++|++|+++|++ ++.+|..|+||||+
T Consensus 139 ~t~L~~A~~~g~~~~~~v~-~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~ 217 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIK-ILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHH-HHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHH
T ss_pred CCHHHHHHHcCCchHHHHH-HHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHH
Confidence 45789999988 777654 88888999999999999999999999999999999999999 99999999999999
Q ss_pred HHHCCCHHHHHHHHhccCCcc
Q 004027 753 AAYCGRPNTCRSGFFHWTQRN 773 (778)
Q Consensus 753 AA~~Gh~eiV~lLL~~~~q~~ 773 (778)
|+..|+.++|++||.+....+
T Consensus 218 A~~~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 218 AILINWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp HHTTTCHHHHHHHHTTTCCTT
T ss_pred HHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999866543
No 91
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.19 E-value=3e-11 Score=104.26 Aligned_cols=60 Identities=30% Similarity=0.277 Sum_probs=56.0
Q ss_pred CCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 712 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 712 ~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
+|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+.+...
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 60 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 489999999999999999999999999999999999999999999999999999987654
No 92
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.19 E-value=9.2e-12 Score=123.77 Aligned_cols=94 Identities=13% Similarity=0.007 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhC-CCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEG-GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~-GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
...+.|+.|+..+..+.+. .|++. |++++.+|..|+||||+||..|+.+++++|+.+|++++.+|..|+||||+|+..
T Consensus 105 ~g~t~L~~A~~~~~~~~v~-~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 105 AGSTALYWACHGGHKDIVE-MLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSH
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcch
Confidence 3556899999999887765 77777 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCCc
Q 004027 757 GRPNTCRSGFFHWTQR 772 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q~ 772 (778)
|+.++++.|+.+...+
T Consensus 184 ~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 184 ACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHHHHHC---------
T ss_pred hHHHHHHHHhccchhh
Confidence 9999999988766543
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.19 E-value=3.1e-11 Score=123.04 Aligned_cols=89 Identities=21% Similarity=0.090 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccC-CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHH---
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA--- 754 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D-~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA--- 754 (778)
..+.||.|+..+..+.+. .|++.|+++|.++ ..|+||||+||..|+.+++++|+.+|++++.+|..|+||||+|+
T Consensus 77 g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 77 GRTALLFVAGLGSDKCVR-LLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp SCBHHHHHHHHTCHHHHH-HHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHH-HHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH
Confidence 456899999999887764 8899999999988 88999999999999999999999999999999999999999988
Q ss_pred -------------HCCCHHHHHHHHhc
Q 004027 755 -------------YCGRPNTCRSGFFH 768 (778)
Q Consensus 755 -------------~~Gh~eiV~lLL~~ 768 (778)
..|+.+++++|+.+
T Consensus 156 ~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 156 KTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp TTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 67999999999875
No 94
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.18 E-value=5.5e-11 Score=118.78 Aligned_cols=93 Identities=18% Similarity=0.125 Sum_probs=82.1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCC------CCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccC-CCCcHHH
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKG------PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALH 751 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~Gad------vN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~-~G~TPLH 751 (778)
..+.|+.|+..+..+.+. .|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++.+|. .|+||||
T Consensus 78 g~t~L~~A~~~~~~~~v~-~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVG-VLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156 (236)
T ss_dssp CCCHHHHHHHHTCHHHHH-HHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHH-HHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Confidence 345789999988887765 77887765 466788999999999999999999999999999999998 9999999
Q ss_pred HHHHCCCHHHHHHHHhccCCc
Q 004027 752 WAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 752 ~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
+|+..|+.++|++||.+....
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~ 177 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADV 177 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCS
T ss_pred HHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999886543
No 95
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.18 E-value=5.2e-11 Score=125.52 Aligned_cols=83 Identities=17% Similarity=0.033 Sum_probs=76.2
Q ss_pred HHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhC-CCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccC
Q 004027 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWT 770 (778)
Q Consensus 692 ~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~-GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~ 770 (778)
.+.+.+.|++.|+++|.+|..|+||||+||..|+.++++.|+.. |++++.+|..|+||||+|+..|+.++|++||.+..
T Consensus 218 ~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 297 (337)
T 4g8k_A 218 VEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 297 (337)
T ss_dssp HHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 45566788999999999999999999999999999999999985 89999999999999999999999999999999987
Q ss_pred Cccc
Q 004027 771 QRNC 774 (778)
Q Consensus 771 q~~c 774 (778)
..++
T Consensus 298 d~n~ 301 (337)
T 4g8k_A 298 STDC 301 (337)
T ss_dssp SSTT
T ss_pred CCCC
Confidence 6553
No 96
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.18 E-value=4.2e-11 Score=118.82 Aligned_cols=92 Identities=20% Similarity=0.192 Sum_probs=66.6
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCC----CcccccCCCCcHHHHHH
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGV----NINFRDVNGWTALHWAA 754 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GA----dvn~rD~~G~TPLH~AA 754 (778)
..+.|+.|+..+..+.+. .|++.|++++..+..|+||||+|+..|+.++++.|+..|+ +++.+|..|+||||+|+
T Consensus 46 g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~ 124 (241)
T 1k1a_A 46 RQTPLHLAVITTLPSVVR-LLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124 (241)
T ss_dssp SCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHH
Confidence 445677777777666544 6667777777777777777777777777777777777776 67777777777777777
Q ss_pred HCCCHHHHHHHHhccCC
Q 004027 755 YCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 755 ~~Gh~eiV~lLL~~~~q 771 (778)
..|+.+++++|+.+...
T Consensus 125 ~~~~~~~~~~Ll~~g~~ 141 (241)
T 1k1a_A 125 NTECQETVQLLLERGAD 141 (241)
T ss_dssp HHTCHHHHHHHHHTTCC
T ss_pred HcCCHHHHHHHHHcCCC
Confidence 77777777777776544
No 97
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.17 E-value=2.1e-11 Score=123.40 Aligned_cols=93 Identities=12% Similarity=-0.082 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCC-cHHHHH--H
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW-TALHWA--A 754 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~-TPLH~A--A 754 (778)
...+.||.|+..+..+.+. .|++.|+++|.+|..|+||||+||..|+.+++++|+++|++++.+|..|. ||||+| +
T Consensus 69 ~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 69 EGITALHNAVCAGHTEIVK-FLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEM 147 (239)
T ss_dssp TSCCHHHHHHHHTCHHHHH-HHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSS
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHh
Confidence 3566899999999887665 88889999999999999999999999999999999999999999998887 999999 7
Q ss_pred HCCCHHHHHHHHhccCC
Q 004027 755 YCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 755 ~~Gh~eiV~lLL~~~~q 771 (778)
..|+.+|+++|+.+...
T Consensus 148 ~~g~~~~~~~Ll~~~a~ 164 (239)
T 1ycs_B 148 EEGYTQCSQFLYGVQEK 164 (239)
T ss_dssp STTCCCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHhhhc
Confidence 88999999999987653
No 98
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.17 E-value=5.3e-12 Score=116.13 Aligned_cols=89 Identities=9% Similarity=-0.140 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.++..+..+.+. .|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 43 g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 43 GWTPLHEACNHGHLKVVE-LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp SCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccH
Confidence 456899999998887765 8889999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhc
Q 004027 759 PNTCRSGFFH 768 (778)
Q Consensus 759 ~eiV~lLL~~ 768 (778)
.+++.+|...
T Consensus 122 ~~~l~~l~~~ 131 (137)
T 3c5r_A 122 KSLLLLPEKN 131 (137)
T ss_dssp HHHHSCC---
T ss_pred HHHHhhcccc
Confidence 8888776543
No 99
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.17 E-value=8.6e-11 Score=120.89 Aligned_cols=62 Identities=35% Similarity=0.519 Sum_probs=57.6
Q ss_pred CCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 711 HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 711 ~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++||.+.+..
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 258 (299)
T 1s70_B 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258 (299)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 45788999999999999999999999999999999999999999999999999999887643
No 100
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.17 E-value=4.4e-11 Score=124.33 Aligned_cols=94 Identities=15% Similarity=0.024 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..++.+++++|+..|++++.+|..|+||||+||..|+
T Consensus 86 G~TpLh~A~~~g~~~~v~-~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIP-LLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp SCCHHHHHHHTTCTTHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCcHHHHH-HHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 456899999988877654 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCcc
Q 004027 759 PNTCRSGFFHWTQRN 773 (778)
Q Consensus 759 ~eiV~lLL~~~~q~~ 773 (778)
.++|++||.+....+
T Consensus 165 ~~~v~~Ll~~gadvn 179 (269)
T 4b93_B 165 HELVALLLQHGASIN 179 (269)
T ss_dssp GGGHHHHHHTTCCTT
T ss_pred HHHHHHHHHCCCCCC
Confidence 999999998875543
No 101
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.17 E-value=4.4e-11 Score=130.40 Aligned_cols=94 Identities=18% Similarity=0.048 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|+++|.++..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+
T Consensus 47 ~~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~ 125 (437)
T 1n11_A 47 VETPLHMAARAGHTEVAK-YLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGH 125 (437)
T ss_dssp CCCHHHHHHHHTCHHHHH-HHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 356788888888777654 7778888888888888899999888888888888888888888888888899999998888
Q ss_pred HHHHHHHHhccCCcc
Q 004027 759 PNTCRSGFFHWTQRN 773 (778)
Q Consensus 759 ~eiV~lLL~~~~q~~ 773 (778)
.++|+.||.+....+
T Consensus 126 ~~~v~~Ll~~~~~~~ 140 (437)
T 1n11_A 126 VETVLALLEKEASQA 140 (437)
T ss_dssp HHHHHHHHHTTCCSC
T ss_pred HHHHHHHHhCCCCCc
Confidence 888888888765544
No 102
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.16 E-value=6.1e-11 Score=121.11 Aligned_cols=90 Identities=9% Similarity=-0.111 Sum_probs=67.3
Q ss_pred HHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCH
Q 004027 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRP 759 (778)
Q Consensus 680 d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~ 759 (778)
.+.|+.++..+..+.+. .|++.|++++..|..|+||||+|+..|+.+++++|+++|++++. |..|+||||+|+..|+.
T Consensus 102 ~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 102 ASPIHEAARRGHVECVN-SLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASE 179 (261)
T ss_dssp CCHHHHHHHTTCHHHHH-HHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCH
T ss_pred CCHHHHHHHcCcHHHHH-HHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCH
Confidence 45677777777666543 67777777777777788888888888888888888888887774 77778888888888888
Q ss_pred HHHHHHHhccCC
Q 004027 760 NTCRSGFFHWTQ 771 (778)
Q Consensus 760 eiV~lLL~~~~q 771 (778)
++|++||.+...
T Consensus 180 ~~v~~Ll~~gad 191 (261)
T 2xai_A 180 ELACLLMDFGAD 191 (261)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 888877776543
No 103
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.16 E-value=9.2e-11 Score=116.57 Aligned_cols=93 Identities=17% Similarity=0.171 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCC-CCcccccCCCCcHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~G-Advn~rD~~G~TPLH~AA~~ 756 (778)
...+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..
T Consensus 43 ~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 121 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVK-YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY 121 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHH-HHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHhCCHHHHH-HHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Confidence 3456888899888877664 788889999999999999999999999999999999998 88999999999999999999
Q ss_pred CCHHHHHHHHhccCC
Q 004027 757 GRPNTCRSGFFHWTQ 771 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q 771 (778)
|+.+++++|+.+...
T Consensus 122 ~~~~~~~~Ll~~g~~ 136 (237)
T 3b7b_A 122 KHVDLVKLLLSKGSD 136 (237)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHCCCC
Confidence 999999999987654
No 104
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.15 E-value=4.1e-11 Score=124.73 Aligned_cols=92 Identities=7% Similarity=-0.189 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCC-ccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHC
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCG-QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~G-qTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~ 756 (778)
...+.|+.|+..+..+.+. .|++.|++++..+..| .||||+|+..|+.+++++|+.+|+++... ..|+||||+|+..
T Consensus 94 ~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~ 171 (285)
T 3kea_A 94 KGNTALYYAVDSGNMQTVK-LFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKN 171 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHH-HHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHc
Confidence 4456788888888777654 7777788888888888 78888888888888888888888876222 2788888888888
Q ss_pred CCHHHHHHHHhccCC
Q 004027 757 GRPNTCRSGFFHWTQ 771 (778)
Q Consensus 757 Gh~eiV~lLL~~~~q 771 (778)
|+.++|++||.+...
T Consensus 172 g~~~~v~~Ll~~gad 186 (285)
T 3kea_A 172 GHVDMMILLLDYMTS 186 (285)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCC
Confidence 888888888876543
No 105
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.14 E-value=7.4e-11 Score=116.23 Aligned_cols=95 Identities=14% Similarity=-0.017 Sum_probs=80.7
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCC-CCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDH-CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~-~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~G 757 (778)
..+.|+.++..+....+.+.|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 142 g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 142 GMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp SCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 445777787655534455688899999999887 8999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCcc
Q 004027 758 RPNTCRSGFFHWTQRN 773 (778)
Q Consensus 758 h~eiV~lLL~~~~q~~ 773 (778)
+.+++++|+.+.....
T Consensus 222 ~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 222 NVWMINHLQEARQAKG 237 (240)
T ss_dssp CHHHHHHHHHHC----
T ss_pred cHHHHHHHHHhhhccC
Confidence 9999999998876553
No 106
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.14 E-value=1.6e-11 Score=121.20 Aligned_cols=92 Identities=16% Similarity=0.019 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHhchH-----HHHHHHHHhCCCCCCccCCCCc-cHHHHHHHcCC-----HhHHHHHHh-CCCCcccccCC
Q 004027 678 VKEKLVQKLLKEKLQ-----VWLVQKAAEGGKGPCVLDHCGQ-GVLHFAAALGY-----DWALEPTTV-AGVNINFRDVN 745 (778)
Q Consensus 678 ~~d~lL~~alk~kl~-----e~L~e~Lle~GadvN~~D~~Gq-TpLHlAA~lG~-----~~~Vk~LL~-~GAdvn~rD~~ 745 (778)
...+.||.++..+.. ..+++.|++.|+++|.+|..|+ ||||+|+..|+ ..++++|+. +|++++.+|..
T Consensus 74 ~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~ 153 (186)
T 3t8k_A 74 EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKW 153 (186)
T ss_dssp TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTT
T ss_pred CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCC
Confidence 345678888776642 2345689999999999999999 99999998554 468999999 99999999999
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhcc
Q 004027 746 GWTALHWAAYCGRPNTCRSGFFHW 769 (778)
Q Consensus 746 G~TPLH~AA~~Gh~eiV~lLL~~~ 769 (778)
|+||||+|+..|+.++|++|+...
T Consensus 154 G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 154 GLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp SCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999999987653
No 107
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=99.13 E-value=5e-10 Score=105.52 Aligned_cols=84 Identities=21% Similarity=0.345 Sum_probs=75.8
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCC-CCCcccEEEEeCCCcc
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRLS 586 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH-~pG~VpL~Vtcsnr~~ 586 (778)
..|+.++|+.|+..||+.|+|+|.+|.++. .|+||+..+=.+++....|||++||+ .||.|.|.+...++.-
T Consensus 6 P~I~~i~P~eG~~~GG~~V~I~G~nF~~Gl-------qV~FG~t~~w~e~itphairv~~PP~~~pG~V~VTl~~k~kqf 78 (138)
T 3muj_A 6 PCIKAISPSEGWTTGGATVIIIGDNFFDGL-------QVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQF 78 (138)
T ss_dssp CEEEEEESSEEETTCCCEEEEEEESCCTTC-------EEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEEE
T ss_pred CceeEecCCCCCccCCeEEEEeCCCcccCC-------EEEECCeeeeeeeecccceEEECCCCCCCCceEEEEeecCccc
Confidence 589999999999999999999999999984 49999999999999999999999997 9999999999888776
Q ss_pred ccc-ceeeeeccC
Q 004027 587 CSE-VREFEYRAS 598 (778)
Q Consensus 587 cSE-Vr~FEYr~~ 598 (778)
|.. ...|.|..-
T Consensus 79 ~~g~p~~F~Y~~l 91 (138)
T 3muj_A 79 CKGAPGRFVYTAL 91 (138)
T ss_dssp CTTSCEEEEEECC
T ss_pred ccCCCceEEEecC
Confidence 654 478999754
No 108
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.12 E-value=1.7e-10 Score=119.95 Aligned_cols=91 Identities=8% Similarity=-0.126 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC
Q 004027 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (778)
Q Consensus 679 ~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh 758 (778)
..+.|+.|+..+..+.+. .|++.|++++..|..|+||||+|+..|+.+++++|++.|++++. |..|+||||+|+..|+
T Consensus 157 g~t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~ 234 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVN-SLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTAS 234 (285)
T ss_dssp TSCHHHHHHHHTCHHHHH-HHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCC
Confidence 345777787777766554 77778888888888888888888888888888888888888884 7788888888888888
Q ss_pred HHHHHHHHhccCC
Q 004027 759 PNTCRSGFFHWTQ 771 (778)
Q Consensus 759 ~eiV~lLL~~~~q 771 (778)
.++|++||.+...
T Consensus 235 ~~~v~~Ll~~gad 247 (285)
T 3d9h_A 235 EELACLLMDFGAD 247 (285)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCC
Confidence 8888888876543
No 109
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.11 E-value=5.2e-11 Score=126.55 Aligned_cols=86 Identities=15% Similarity=0.044 Sum_probs=69.9
Q ss_pred HHHHHHhchHHHHHHHHHhCCCCCCc-cCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC---
Q 004027 683 VQKLLKEKLQVWLVQKAAEGGKGPCV-LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR--- 758 (778)
Q Consensus 683 L~~alk~kl~e~L~e~Lle~GadvN~-~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh--- 758 (778)
++.++...+. .+.+.+++.|+++|. +|..|+||||+||..|+.++|++||++|++++.+|..|+||||+|+..|+
T Consensus 101 ~~~a~~~~~~-~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~ 179 (327)
T 1sw6_A 101 QHVSFDSLLQ-EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179 (327)
T ss_dssp ---CHHHHHH-HHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHH
T ss_pred hHHHHHhhHH-HHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccccc
Confidence 3445555544 445578889999999 89999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhcc
Q 004027 759 PNTCRSGFFHW 769 (778)
Q Consensus 759 ~eiV~lLL~~~ 769 (778)
.+++..||.+.
T Consensus 180 ~~~~~~ll~~~ 190 (327)
T 1sw6_A 180 SGTFEALLDYL 190 (327)
T ss_dssp TTCHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 45555555443
No 110
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.04 E-value=1.3e-10 Score=125.43 Aligned_cols=95 Identities=16% Similarity=0.044 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCC---CCcccccCCCCcHHHHHH
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG---VNINFRDVNGWTALHWAA 754 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~G---Advn~rD~~G~TPLH~AA 754 (778)
...+.|+.|+..+..+.+. .|++.|++++..+..|+||||+||..|+.+++++|+.+| ++++.+|..|+||||+|+
T Consensus 165 ~g~TpL~~A~~~g~~~iv~-~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVA-YLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHH-HHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHH-HHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 4567888888888777654 788888899888889999999999999999999999887 788899999999999999
Q ss_pred HCC---CHHHHHHHHhccCCcc
Q 004027 755 YCG---RPNTCRSGFFHWTQRN 773 (778)
Q Consensus 755 ~~G---h~eiV~lLL~~~~q~~ 773 (778)
..| +.+++++|+.+....+
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~ 265 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVD 265 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSS
T ss_pred HhCCcchHHHHHHHHHCCCCcc
Confidence 887 7889999888876543
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.03 E-value=2.8e-10 Score=101.73 Aligned_cols=67 Identities=22% Similarity=0.108 Sum_probs=59.1
Q ss_pred CCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCCc
Q 004027 706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQR 772 (778)
Q Consensus 706 vN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q~ 772 (778)
+...|.+|.|+||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++||.+....
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~ 83 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV 83 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 3447889999999999999999999999999999999999999999999999999999999886543
No 112
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.03 E-value=1.1e-09 Score=107.76 Aligned_cols=88 Identities=23% Similarity=0.309 Sum_probs=43.9
Q ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCC-H
Q 004027 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR-P 759 (778)
Q Consensus 681 ~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh-~ 759 (778)
+.|+.|+..+..+.+. .|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++ .
T Consensus 78 t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVV-QLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSV 156 (240)
T ss_dssp CHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSS
T ss_pred ChhHHHHHcCCHHHHH-HHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChH
Confidence 3445555544444332 4444555555555555555555555555555555555555555555555555555554443 4
Q ss_pred HHHHHHHhcc
Q 004027 760 NTCRSGFFHW 769 (778)
Q Consensus 760 eiV~lLL~~~ 769 (778)
+++++|+.+.
T Consensus 157 ~~~~~L~~~~ 166 (240)
T 3eu9_A 157 DPTRLLLTFN 166 (240)
T ss_dssp TTHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 4455444443
No 113
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.02 E-value=2.3e-10 Score=121.58 Aligned_cols=92 Identities=14% Similarity=-0.024 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHhCCCCCCccCCCCccHHHHHHHcCC---HhHHHHHHhCC-CCcccccCCCCcHHHH
Q 004027 677 EVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY---DWALEPTTVAG-VNINFRDVNGWTALHW 752 (778)
Q Consensus 677 ~~~d~lL~~alk~kl~e~L~e~Lle~GadvN~~D~~GqTpLHlAA~lG~---~~~Vk~LL~~G-Advn~rD~~G~TPLH~ 752 (778)
....+.||.|+..+..+.+. .|++.|++++.+|..|+||||+||..|+ .++++.|+..+ ++++.+|..|+||||+
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~-~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 207 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVK-HLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 207 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHH-HHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHH
Confidence 34567899999999887765 8999999999999999999999999998 68888888886 7899999999999999
Q ss_pred HHH----CCCHHHHHHHHhcc
Q 004027 753 AAY----CGRPNTCRSGFFHW 769 (778)
Q Consensus 753 AA~----~Gh~eiV~lLL~~~ 769 (778)
|+. .|+.+++++||...
T Consensus 208 A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 208 IIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp HHHHHTSTTCHHHHHHHHHHH
T ss_pred HHHHccccccHHHHHHHHHHH
Confidence 999 99999999998763
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.99 E-value=4e-10 Score=100.34 Aligned_cols=64 Identities=25% Similarity=0.204 Sum_probs=60.6
Q ss_pred ccCCCCccHHHHHHHcCCHhHHHHHHhCCCCcccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 708 VLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 708 ~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
.+|..|+||||+||..|..++++.|+..|++++.+|..|+||||+|+..|+.+++++||.+...
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 67 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999999999999999999999999999987554
No 115
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.89 E-value=5e-10 Score=122.96 Aligned_cols=89 Identities=13% Similarity=0.006 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHhCCCCC---CccCCCCccHHHHHHHcCCHhHHHHHHhCCCCccc--ccCCCCcHHHH
Q 004027 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGP---CVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINF--RDVNGWTALHW 752 (778)
Q Consensus 678 ~~d~lL~~alk~kl~e~L~e~Lle~Gadv---N~~D~~GqTpLHlAA~lG~~~~Vk~LL~~GAdvn~--rD~~G~TPLH~ 752 (778)
...+.|+.|+..+..+.+. .|++.|+++ +..+.. .||||+||..|+.++|++|+++|++++. +|..|+||||+
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~-~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~ 204 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLN-RLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRW 204 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHH-HHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHH
Confidence 3456788888888777654 777777652 222222 8888888888888888888888888877 78888888888
Q ss_pred HH-HCCCHHHHHHHHhc
Q 004027 753 AA-YCGRPNTCRSGFFH 768 (778)
Q Consensus 753 AA-~~Gh~eiV~lLL~~ 768 (778)
|| ..||.+||++||.+
T Consensus 205 Aa~~~G~~eiv~~Ll~~ 221 (376)
T 2aja_A 205 AAVGRGHHNVINFLLDC 221 (376)
T ss_dssp HHSTTCCHHHHHHHTTS
T ss_pred HHHHCCCHHHHHHHHhC
Confidence 88 88888888888764
No 116
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=98.78 E-value=1.1e-08 Score=108.68 Aligned_cols=86 Identities=21% Similarity=0.346 Sum_probs=75.4
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCC-CCCcccEEEEeCCCc
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRL 585 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH-~pG~VpL~Vtcsnr~ 585 (778)
...|+.++|+.|+.+||+.|+|.|.+|.+|.. |+||...|-.++|.+..|||++||+ .||.|.|.+...++.
T Consensus 231 tP~IkaIsPnEG~~tGG~tV~IiGenFf~GLQ-------VvFGtt~vWselITphAIRV~tPPr~~PGvVdVTLs~ksKq 303 (402)
T 3mlp_A 231 TPCIKAISPSEGWTTGGATVIIIGDNFFDGLQ-------VIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 303 (402)
T ss_dssp CCEEEECSSCEECTTCCCEEEEEEECCCTTCE-------EEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CcceEEecCCCCCccCCeEEEEeCCCcccCCE-------EEEccEeeeeEEecccceEEECCCCCCCCceEEEEEecCcc
Confidence 45999999999999999999999999999854 9999999999999999999999997 999999999988877
Q ss_pred ccc-cceeeeeccCC
Q 004027 586 SCS-EVREFEYRASH 599 (778)
Q Consensus 586 ~cS-EVr~FEYr~~~ 599 (778)
-|- ....|.|....
T Consensus 304 f~kg~pgrF~YtALn 318 (402)
T 3mlp_A 304 FCKGTPGRFIYTALN 318 (402)
T ss_dssp ESTTSCEEEEEC---
T ss_pred cccCCCCceeeecCC
Confidence 664 45788887543
No 117
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.73 E-value=6.2e-09 Score=114.25 Aligned_cols=105 Identities=13% Similarity=-0.045 Sum_probs=78.8
Q ss_pred CCchHHHHHHhhcccCCChhHHHHHHHHHHHHhchHHHHHHHHHhCCCCC---CccCCCCccHHHHHHHcCCHhHHHHHH
Q 004027 657 ENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGP---CVLDHCGQGVLHFAAALGYDWALEPTT 733 (778)
Q Consensus 657 Dd~~w~~Llk~~~~~~~s~d~~~d~lL~~alk~kl~e~L~e~Lle~Gadv---N~~D~~GqTpLHlAA~lG~~~~Vk~LL 733 (778)
+.+-|..+++... . ..+.|+.|+..+..+.+. .|++.|+.. +..+..|.||||+||..|+.++|++|+
T Consensus 78 ~~~~~~~l~~~g~----~----~~T~Lh~Aa~~G~~e~v~-~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll 148 (376)
T 2aja_A 78 AKQLWSDAHKKGI----K----SEVICFVAAITGCSSALD-TLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLC 148 (376)
T ss_dssp CTTHHHHHHHHTC----C----HHHHHHHHHHHCCHHHHH-HHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHcCC----C----cCCHHHHHHHcCCHHHHH-HHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHH
Confidence 3455666664321 1 247899999999988775 777877622 234567899999999999999999999
Q ss_pred hCCCC---cccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Q 004027 734 VAGVN---INFRDVNGWTALHWAAYCGRPNTCRSGFFHWTQ 771 (778)
Q Consensus 734 ~~GAd---vn~rD~~G~TPLH~AA~~Gh~eiV~lLL~~~~q 771 (778)
++|++ ++..+.+ +||||+||..||.++|++||.+...
T Consensus 149 ~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~ 188 (376)
T 2aja_A 149 ELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT 188 (376)
T ss_dssp HSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG
T ss_pred hCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc
Confidence 99986 3333333 9999999999999999999998654
No 118
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=98.16 E-value=5.9e-06 Score=74.49 Aligned_cols=84 Identities=19% Similarity=0.156 Sum_probs=62.5
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCchhhhcccc-eEEEeCCeeee--eEEeeCCceeeecCCCC--CCcccEEEEe
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCK-WSCMFGEIEVP--AEIVAGGVLRCHTSSQK--VGRVPFYVTC 581 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~-~~cmFGd~eVp--aei~q~GVLrC~~PpH~--pG~VpL~Vtc 581 (778)
...|++|+|..|+. ||+|+|.|++|.... +. ..|.+|+++.. ++......|+|.++|+. .|.|.|+|..
T Consensus 7 ~P~It~i~P~~Gp~--GT~vTI~G~nlg~~~----sdv~~V~vgg~~C~~~~~~~s~~~IvC~~~~~~~~~g~V~V~v~~ 80 (99)
T 1uad_C 7 PPLVTGISPNEGIP--WTKVTIRGENLGTGP----TDLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKS 80 (99)
T ss_dssp CCEEEEEESSEEST--TCEEEEEEECSCSSG----GGEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEETT
T ss_pred CCEEEEEECCCcCC--CCEEEEEEEeCCCCc----ccceEEEECCEEceEeeceeecCEEEEEeCCCCCcceeEEEEECC
Confidence 56999999999988 799999999998762 12 46999998443 36888999999999984 4555555522
Q ss_pred CCCcccccceeeeeccC
Q 004027 582 SNRLSCSEVREFEYRAS 598 (778)
Q Consensus 582 snr~~cSEVr~FEYr~~ 598 (778)
+..+.|.. .|+|.++
T Consensus 81 -~~~~~s~~-~F~y~~P 95 (99)
T 1uad_C 81 -GGRGTSTV-SFKLLKP 95 (99)
T ss_dssp -TEECEESS-CCEECCC
T ss_pred -CCcEEecc-eEEEeCc
Confidence 22344544 8999864
No 119
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=2e-05 Score=87.44 Aligned_cols=88 Identities=17% Similarity=0.231 Sum_probs=72.5
Q ss_pred CCCceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCCCC-CcccEEEEeC
Q 004027 504 QDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKV-GRVPFYVTCS 582 (778)
Q Consensus 504 q~q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH~p-G~VpL~Vtcs 582 (778)
..|...|++|+|..|. .||+|+|.|++|... .+...|+||+++.....+.+..|.|.+|.+.+ |.++|.|...
T Consensus 14 ~~~p~~i~~~~P~~g~--~~~~~~i~G~nfg~~----~~~~~v~~~~~~~~v~~~~~~~i~~~vp~~~~~g~~~v~~~~~ 87 (430)
T 3tc9_A 14 PNKPVVISEFSPKEGG--LGTRMLLYGENFGSD----ISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILND 87 (430)
T ss_dssp TTSCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEEECT
T ss_pred CCCCCEEEEEcCCCCC--CCCEEEEEEEcCCCC----ccceEEEECCEEEEEEEECCCEEEEEeCCCCCCccEEEEEecC
Confidence 3455699999999999 799999999999763 36789999999888888999999999999987 9999999876
Q ss_pred CCc----ccccceeeeeccC
Q 004027 583 NRL----SCSEVREFEYRAS 598 (778)
Q Consensus 583 nr~----~cSEVr~FEYr~~ 598 (778)
+.. +.+ -..|+|..+
T Consensus 88 ~~~~~~~~~~-~~~F~y~~~ 106 (430)
T 3tc9_A 88 EGEEIANTEA-NEKFVYQKK 106 (430)
T ss_dssp TSCEEEEEEC-SSCCEECCC
T ss_pred CcceeeEEEE-eeEEEEEEE
Confidence 643 223 357888643
No 120
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.75 E-value=5.4e-05 Score=83.10 Aligned_cols=88 Identities=17% Similarity=0.212 Sum_probs=72.2
Q ss_pred CCCceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCC----eeeeeEEeeCCceeeecCCCCCCcccEEE
Q 004027 504 QDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGE----IEVPAEIVAGGVLRCHTSSQKVGRVPFYV 579 (778)
Q Consensus 504 q~q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd----~eVpaei~q~GVLrC~~PpH~pG~VpL~V 579 (778)
..|...|++|+|..|. .|+||+|.|++|... .+...|+||+ .+.....+....|.|++|.+.+|.+++.|
T Consensus 14 ~~~~~~~~~~~p~~g~--~~~~~~i~g~nfg~~----~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~vp~~~~g~~~i~v 87 (409)
T 3hrp_A 14 PNQPVTVESFMPVEGK--LREKVIVKGSNFGTD----KSKVKVYFVDEAAERLSTVIGIDNNTLYCLAPRQLPGGNRIKV 87 (409)
T ss_dssp TTSCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEEECSSCEEEEEEEEEETTEEEEECCSCCSEEEEEEE
T ss_pred CCCCcEEEEEcCCCCC--CCcEEEEEeEcCCCC----ccceEEEECCcccceEEEEEEECCCEEEEEECCCCCCcEEEEE
Confidence 4566699999999988 799999999999864 3678999999 77777778999999999999889999999
Q ss_pred EeCCCcccccceeeeeccC
Q 004027 580 TCSNRLSCSEVREFEYRAS 598 (778)
Q Consensus 580 tcsnr~~cSEVr~FEYr~~ 598 (778)
.-.+..+.++ ..|.|...
T Consensus 88 ~~~~~~~~~~-~~F~y~~~ 105 (409)
T 3hrp_A 88 IVDGKEVTTD-GTFKYEQA 105 (409)
T ss_dssp EETTEEEECS-SCEEECCC
T ss_pred EECCeeEEEe-eeEEEecc
Confidence 9877644333 46777543
No 121
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.73 E-value=4.4e-05 Score=86.92 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=71.4
Q ss_pred CCCceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCCCC-CcccEEEEeC
Q 004027 504 QDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKV-GRVPFYVTCS 582 (778)
Q Consensus 504 q~q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH~p-G~VpL~Vtcs 582 (778)
+.|...|++|+|..|.. ||+|+|.|+.|... .+...|+||++++...-+.+..|.|.+|.|.. |.++|.|.-+
T Consensus 14 p~~p~~i~~~~P~~G~~--~t~~~I~G~nFg~d----~~~i~V~~~~~~a~v~~~~~~~i~~~vp~~~~~G~~~v~v~~~ 87 (496)
T 3kya_A 14 PSKPVAISDFTPKEGGA--YQKLLIYGENFGTD----VSKVKVKIGGKDAIVINVKSTYVYCFVPSGAFSGEIEITVGEG 87 (496)
T ss_dssp TTSCCEEEEEECSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEESCG
T ss_pred CCCCcEEEEEcCCCCCC--CCEEEEEeecCCCC----cceeEEEECCEEEEEEEECCCEEEEEECCCCCCCcEEEEEEec
Confidence 45667999999999998 79999999999864 36899999998777777889999999999966 9999988765
Q ss_pred CC--cccccceeeeeccC
Q 004027 583 NR--LSCSEVREFEYRAS 598 (778)
Q Consensus 583 nr--~~cSEVr~FEYr~~ 598 (778)
.+ .+.++ ..|+|...
T Consensus 88 ~~~~~~~~~-~~F~Y~~~ 104 (496)
T 3kya_A 88 ENAVTTTAS-TTFSYEKK 104 (496)
T ss_dssp GGCEEEECS-SCCEECCC
T ss_pred CCceEEEec-ceEEEEEE
Confidence 43 23333 58888643
No 122
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.64 E-value=4.5e-05 Score=90.55 Aligned_cols=92 Identities=16% Similarity=0.176 Sum_probs=63.1
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCchhh--hcccceEEEeCCeeeeeE--EeeCCceeeecCCCCCCcccEEEEeC
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQE--AENCKWSCMFGEIEVPAE--IVAGGVLRCHTSSQKVGRVPFYVTCS 582 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~--~~~~~~~cmFGd~eVpae--i~q~GVLrC~~PpH~pG~VpL~Vtcs 582 (778)
...|+.|+|..|+..|||.|+|.|.+|..+.. .......|.||+++.... .+....|+|.+|+..+|.+++.|+..
T Consensus 541 ~P~ItsI~P~~Gp~~GGT~vTI~G~nf~~~~~~~~~~~~~~V~igg~~C~~~~~~~s~t~I~C~tp~~~~~~~~v~V~v~ 620 (727)
T 2uzx_B 541 LPAIYKVFPNSAPLEGGTRLTICGWDFGFRRNNKFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGPAMNKHFNMSIIIS 620 (727)
T ss_dssp CCEEEEEESSBCCSSCCCEEEEEEECCCEEETTEEESTTCEEEETTEECEECGGGCCSSEEEEECCC-----CCCEEEEE
T ss_pred CCEEeccCCCcccCCCCEEEEEEEecCCCCcccccCCcccEEEECCCccceeeeeccCCEEEEEeCCCCCCCccEEEEEe
Confidence 57999999999999999999999999986410 012457899999844432 35678999999998766555555544
Q ss_pred CCcccccceeeeeccC
Q 004027 583 NRLSCSEVREFEYRAS 598 (778)
Q Consensus 583 nr~~cSEVr~FEYr~~ 598 (778)
++...+....|+|.++
T Consensus 621 ~~~~~~~~~~FtY~~P 636 (727)
T 2uzx_B 621 NGHGTTQYSTFSYVDP 636 (727)
T ss_dssp CSSCEEEEECCBCCCC
T ss_pred CCcceecccccccccc
Confidence 4332344567999643
No 123
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.45 E-value=1.8e-05 Score=93.99 Aligned_cols=74 Identities=18% Similarity=0.204 Sum_probs=1.2
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCC-CCCcccEEEEeCCCc
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRL 585 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH-~pG~VpL~Vtcsnr~ 585 (778)
..+|+.|+|.+|+..|||.|+|+|.+|..+ .+..|.||+.+.....+.+..|+|.+|++ .+|.|+|.|+.++..
T Consensus 635 ~P~I~sisP~~G~~sGGt~ITI~G~nf~~~-----~~~~V~ig~~~C~i~~~s~t~I~C~tP~~~~~g~~~V~V~idg~~ 709 (727)
T 2uzx_B 635 DPVITSISPKYGPMAGGTLLTLTGNYLNSG-----NSRHISIGGKTCTLKSVSNSILECYTPAQTISTEFAVKLKIDLAN 709 (727)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cceeEEECCCccccCCCEEEEEEEECCCCC-----CceEEEECCEEeeEEeecCCEEEEEcCCCCCCceEEEEEEECCEE
Confidence 568999999999999999999999999876 34779999987766778999999999999 689999999987755
No 124
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.42 E-value=0.00035 Score=77.59 Aligned_cols=89 Identities=20% Similarity=0.237 Sum_probs=70.1
Q ss_pred CCCceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCCCC-CcccEEEEeC
Q 004027 504 QDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKV-GRVPFYVTCS 582 (778)
Q Consensus 504 q~q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH~p-G~VpL~Vtcs 582 (778)
+.|...|++|+|.+|.. ||||+|.|++|... ..+..|+||+.++...-+....|.|.+|+... |.|.|.|.-+
T Consensus 16 ~~~p~~i~~~~P~~g~~--~~~~~i~G~nfg~~----~~~~~v~~~~~~a~v~~~~~~~i~~~vp~~~~~g~~~v~v~~~ 89 (433)
T 4hw6_A 16 PKEEIVVEKFLPTEGRK--GTRVVVYGRNFGND----VSKVKVTIGGYPAKVINVKGESLLCICPSKAYEGDVKVSVVGD 89 (433)
T ss_dssp TTSCCEEEEEESSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEEEEEEECSSEEEEECCTTCTTCCEEEEEECT
T ss_pred CCCCCEEEEECCCCCCC--CCEEEEEeECCCCC----cceeEEEECCEEEEEEEeCCCEEEEEeCCCCCCCCEEEEEecC
Confidence 45556999999999987 99999999999763 36899999998888777889999999999954 9999988876
Q ss_pred CCc---ccccceeeeeccC
Q 004027 583 NRL---SCSEVREFEYRAS 598 (778)
Q Consensus 583 nr~---~cSEVr~FEYr~~ 598 (778)
+.. ...--..|+|...
T Consensus 90 ~~~~~~~~~~~~~F~y~~~ 108 (433)
T 4hw6_A 90 DEAELKSGVCEAKFDYQYN 108 (433)
T ss_dssp TSCEEEEEECSSCCEECCC
T ss_pred CcceeeEEEeeeEEEEEee
Confidence 641 1111346777543
No 125
>2yrp_A Nuclear factor of activated T-cells, cytoplasmic 4; beta-sandwich, immunoglobulin-like fold, TIG domain, IPT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.98 E-value=0.0021 Score=59.27 Aligned_cols=87 Identities=20% Similarity=0.237 Sum_probs=65.0
Q ss_pred CCCCceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe--------eee----eEEeeCCceeeecCC-
Q 004027 503 SQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI--------EVP----AEIVAGGVLRCHTSS- 569 (778)
Q Consensus 503 ~q~q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~--------eVp----aei~q~GVLrC~~Pp- 569 (778)
+..-+..|.+.|-.-+++.||-||+|+|..|... .-|.|=+. |.- +++.....|+|.+||
T Consensus 4 ~a~~~P~I~k~s~~s~~v~GG~Ev~Ll~~k~~kd-------~kV~F~E~~~dG~~~WE~~a~f~~d~~~q~aivf~tPpY 76 (114)
T 2yrp_A 4 GSSGLPQVEAYSPSACSVRGGEELVLTGSNFLPD-------SKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEY 76 (114)
T ss_dssp CCCSCCEEEEEESSCEETTCCSEEEEEEESCCTT-------CEEEEECBCTTSCBCCCCBCCBCTTTCBTTEEEEECCCC
T ss_pred CCCCCCEEEEecCcccccCCCCEEEEEecccCCC-------CEEEEEEECCCCCcceEEeeEEChHHcccccEEEecCCC
Confidence 3456889999999999999999999999988642 23555321 222 345677899999999
Q ss_pred C-----CCCcccEEEEeCCCcccccceeeeecc
Q 004027 570 Q-----KVGRVPFYVTCSNRLSCSEVREFEYRA 597 (778)
Q Consensus 570 H-----~pG~VpL~Vtcsnr~~cSEVr~FEYr~ 597 (778)
| .|=.|-||| |.+...+|+...|+|..
T Consensus 77 ~~~~I~~pV~V~~~l-~~~~rk~Se~~~FtY~P 108 (114)
T 2yrp_A 77 SNKRVSRPVQVYFYV-SNGRRKRSPTQSFRFLP 108 (114)
T ss_dssp SCCSCSSCEEEEEEE-ECSSSCBCCCEEEEEEC
T ss_pred CCCccCCCeEEEEEE-CCCCCcccCCcCcEEec
Confidence 2 455677777 55545689999999976
No 126
>1ikn_C P50D, protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1
Probab=95.10 E-value=0.03 Score=52.06 Aligned_cols=84 Identities=17% Similarity=0.186 Sum_probs=60.3
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCC-chhhhcccceEEEeCC------e-ee-----eeEEeeCCceeeecCC-C---
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLM-SQQEAENCKWSCMFGE------I-EV-----PAEIVAGGVLRCHTSS-Q--- 570 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~-~~~~~~~~~~~cmFGd------~-eV-----paei~q~GVLrC~~Pp-H--- 570 (778)
..|.+.|=.-|++.||.||.++|..+. .. .-|.|=+ + |. ++.+.....|+|.+|| |
T Consensus 4 l~I~r~s~~s~~v~GG~Ev~Llc~kv~K~d-------ikV~F~e~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~ 76 (119)
T 1ikn_C 4 LKIVRMDRTAGCVTGGEEIYLLCDKVQKDD-------IQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVN 76 (119)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTS-------EEEEEEEECTTSCEEEEECCCCGGGEETTTEEEEECCCCSCTT
T ss_pred CEEEEeeCCccccCCCCEEEEEeccccCCC-------CEEEEEEeCCCCCceEEeEEeChhhccccceEEEECCCCCCCC
Confidence 479999999999999999999999775 22 2244422 1 22 3445567899999999 2
Q ss_pred --CCCcccEEEEeCCCcccccceeeeeccC
Q 004027 571 --KVGRVPFYVTCSNRLSCSEVREFEYRAS 598 (778)
Q Consensus 571 --~pG~VpL~Vtcsnr~~cSEVr~FEYr~~ 598 (778)
.|=.|-|+|.......+|+...|+|...
T Consensus 77 I~~pV~V~i~L~r~sd~~~Sep~~FtY~P~ 106 (119)
T 1ikn_C 77 ITKPASVFVQLRRKSDLETSEPKPFLYYPE 106 (119)
T ss_dssp CSSCEEEEEEEEETTTCCBCCCEEEEEECC
T ss_pred cCCCEEEEEEEEcCCCCCccCCcccEeecC
Confidence 3445666666554556899999999764
No 127
>1u36_A DNA-binding, nuclear factor NF-kappa-B P105 subunit; transcription factor, NF-KB, dimerization domain, intertwined folding; 1.89A {Mus musculus} SCOP: b.1.18.1 PDB: 1u3z_A 1u3y_A 3jv4_B 1bfs_A 1u3j_A 1u42_A 1u41_A 1nfi_B
Probab=94.44 E-value=0.051 Score=49.56 Aligned_cols=83 Identities=16% Similarity=0.113 Sum_probs=59.0
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCc-hhhhcccceEEEeCCe-------eee-----eEEeeCCceeeecCC-C---
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMS-QQEAENCKWSCMFGEI-------EVP-----AEIVAGGVLRCHTSS-Q--- 570 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~-~~~~~~~~~~cmFGd~-------eVp-----aei~q~GVLrC~~Pp-H--- 570 (778)
..|.+.|=.-|++.||.||.++|..+.- . .-|.|=+. |.- +.+.....|+|.+|| |
T Consensus 4 l~I~r~s~~s~~v~GG~Ev~Llc~kv~K~d-------ikV~F~E~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~ 76 (106)
T 1u36_A 4 LKIVRMDRTAGCVTGGEEIWLLCDKVQKDD-------IQIRFYEEEENGGVWEGFGDFSPTDVHRQFAICFKTPKYKDVN 76 (106)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTS-------CEEEEEECC----CEEEECBCCGGGEETTTEEEEECCCCSCTT
T ss_pred CEEEEeeCCccccCCCCEEEEEeccccCCC-------CEEEEEEeCCCCCceEEeeecCHHHcccceEEEEECCCCCCCc
Confidence 4799999999999999999999997762 2 22444321 232 344566889999999 2
Q ss_pred --CCCcccEEEEeCCCcccccceeeeecc
Q 004027 571 --KVGRVPFYVTCSNRLSCSEVREFEYRA 597 (778)
Q Consensus 571 --~pG~VpL~Vtcsnr~~cSEVr~FEYr~ 597 (778)
.|=.|-|+|.......+|+...|+|..
T Consensus 77 I~~pV~V~~~l~r~sd~~~Sep~~FtY~P 105 (106)
T 1u36_A 77 ITKPASVFVQLRRKSDLETSEPKPFLYYP 105 (106)
T ss_dssp CSSCEEEEEEEECTTTCCBCCCEEEEEEC
T ss_pred cCCCEEEEEEEEcCCCCCccCCcCcEEcC
Confidence 344555566655455689999999964
No 128
>1my7_A NF-kappab P65 (RELA) subunit; immunoglobulin, IG, beta-sandwich, beta-sheet, homodimerdna- binding, transcription regulation, activator; 1.49A {Mus musculus} SCOP: b.1.18.1 PDB: 1my5_A 1bft_A
Probab=94.21 E-value=0.075 Score=49.00 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=61.5
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCc-hhhh--cccceEEEeCCeeeeeEEeeCCceeeecCC-C-----CCCcccEE
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMS-QQEA--ENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-Q-----KVGRVPFY 578 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~-~~~~--~~~~~~cmFGd~eVpaei~q~GVLrC~~Pp-H-----~pG~VpL~ 578 (778)
..|.+.|=.-|++.||.||.++|..+.- .-.+ ..-.| -+||++. |+++.....|+|.+|| | .|=.|-++
T Consensus 4 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~VrF~e~~W-E~~g~f~-~~Dvh~Q~aIvfktPpY~~~~I~~pV~V~i~ 81 (114)
T 1my7_A 4 LKICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGW-EARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQ 81 (114)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTE-EEECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEE
T ss_pred cEEEEecCCceecCCCcEEEEEecccccCCCEEEEEccCe-EEecccC-hhhcccceeEEEECCCCCCCccCCCEEEEEE
Confidence 4799999999999999999999997753 2110 00113 2334332 2566778899999999 2 34455566
Q ss_pred EEeCCCcccccceeeeeccC
Q 004027 579 VTCSNRLSCSEVREFEYRAS 598 (778)
Q Consensus 579 Vtcsnr~~cSEVr~FEYr~~ 598 (778)
|...+...+|+...|+|...
T Consensus 82 L~r~sd~~~Sep~~FtY~P~ 101 (114)
T 1my7_A 82 LRRPSDRELSEPMEFQYLPD 101 (114)
T ss_dssp EEETTTTEECCCEEEEEECC
T ss_pred EEeCCCCCcCCCcccEEecC
Confidence 65544556899999999764
No 129
>1oy3_C Transcription factor P65; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: b.1.18.1 PDB: 1k3z_A
Probab=93.09 E-value=0.19 Score=47.62 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=61.4
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCc-hhhh--cccceEEEeCCeeeeeEEeeCCceeeecCC-C-----CCCcccEE
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMS-QQEA--ENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-Q-----KVGRVPFY 578 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~-~~~~--~~~~~~cmFGd~eVpaei~q~GVLrC~~Pp-H-----~pG~VpL~ 578 (778)
..|.++|=.-|++.||.||.++|..+.- .-++ ..-.| -.||++. |+++.....|+|.+|| | .|=.|-++
T Consensus 4 L~I~r~s~~sg~v~GG~Ev~LLceKv~K~Di~VrF~e~~W-E~~g~f~-~~dVh~Q~AIvfkTPpY~~~~I~~pV~V~iq 81 (136)
T 1oy3_C 4 LKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGW-EARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQ 81 (136)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTE-EEECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEE
T ss_pred cEEEEecCCccccCCCcEEEEEccccccCCCEEEEEccCe-EEecccC-hhheecceEEEEECCCCCCccCCCCeEEEEE
Confidence 4799999999999999999999997653 2110 00112 1233332 2556677889999999 2 44466667
Q ss_pred EEeCCCcccccceeeeeccC
Q 004027 579 VTCSNRLSCSEVREFEYRAS 598 (778)
Q Consensus 579 Vtcsnr~~cSEVr~FEYr~~ 598 (778)
|...+...+|+...|+|...
T Consensus 82 L~rpsd~~~Sep~~F~Y~P~ 101 (136)
T 1oy3_C 82 LRRPSDRELSEPMEFQYLPD 101 (136)
T ss_dssp EEETTTTEECCCEEEEEECC
T ss_pred EEeCCCCCccCCcceEEecC
Confidence 76655557899999999763
No 130
>1zk9_A Transcription factor RELB; NF-KB, transcription factors, intertwined dimer; 2.18A {Mus musculus} PDB: 1zka_A 3jv6_A 3jv4_A 3jss_A 3juz_A 3jv0_A
Probab=93.08 E-value=0.046 Score=50.09 Aligned_cols=88 Identities=11% Similarity=0.140 Sum_probs=59.0
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCc-hhhh--cccceEEEeCCeeeeeEEeeCCceeeecCC-C---CCC--cccEE
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMS-QQEA--ENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-Q---KVG--RVPFY 578 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~-~~~~--~~~~~~cmFGd~eVpaei~q~GVLrC~~Pp-H---~pG--~VpL~ 578 (778)
..|.+.|=.-|++.||.||.++|..+.- .-.+ ..--|- +||++ .++++.....|+|.+|| | ... .|-|+
T Consensus 13 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~V~F~e~~WE-~~~~f-~~~Dvh~Q~aIvf~tPpY~~~~I~~pV~V~i~ 90 (110)
T 1zk9_A 13 LRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSTASWE-GRADF-SQADVHRQIAIVFKTPPYEDLEISEPVTVNVF 90 (110)
T ss_dssp SCEEEESCSCCCTTCCCCCCEEESCCCTTSCCCEEEETTEE-EECCC-CGGGCCCCCCCCCCCCCCSCTTCSSCEEEEEC
T ss_pred CEEEEecCCccccCCCCEEEEEecccccCCcEEEEechhee-ecccc-CcccccccceEEEECCCCCCcccCCCeEEEEE
Confidence 5899999999999999999999997654 2110 000232 23332 13566778899999999 2 223 44444
Q ss_pred EEeCCCcccccceeeeecc
Q 004027 579 VTCSNRLSCSEVREFEYRA 597 (778)
Q Consensus 579 Vtcsnr~~cSEVr~FEYr~ 597 (778)
|...+...+|+...|+|..
T Consensus 91 L~r~sd~~~Sep~~FtY~P 109 (110)
T 1zk9_A 91 LQRLTDGVCSEPLPFTYLP 109 (110)
T ss_dssp CBCTTTCCBCCCEEEEECC
T ss_pred EEeCCCCCccCCcCcEEcC
Confidence 4433455689999999964
No 131
>3iag_C Recombining binding protein suppressor of hairless; protein-DNA complex, signaling, transcription, notch, activator, alternative splicing; HET: XYL; 2.00A {Mus musculus} PDB: 3brg_C* 3nbn_A 2f8x_C 3v79_C*
Probab=92.93 E-value=0.17 Score=55.46 Aligned_cols=68 Identities=18% Similarity=0.314 Sum_probs=58.1
Q ss_pred eEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCC-----------CCCcccEEEEeCCCccccccee
Q 004027 524 VKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-----------KVGRVPFYVTCSNRLSCSEVRE 592 (778)
Q Consensus 524 tKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH-----------~pG~VpL~Vtcsnr~~cSEVr~ 592 (778)
.-|-|.|.+|.. ++.|.||++++.|.+-.+-.|.|.+|+- .|-.|||-+...++..-+--..
T Consensus 343 amlEl~G~nF~~-------~L~VWFG~v~aeT~yR~~e~l~c~vP~~~~~~~~w~~~~~~~~Vpi~LVR~DGviy~t~~t 415 (422)
T 3iag_C 343 AMLELTGQNFTP-------NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLT 415 (422)
T ss_dssp CEEEEEEESCCT-------TEEEEETTEECCEEEEETTEEEEECCCGGGTSTTCSSCCSCEEEEEEEEETTSEEEEEEEE
T ss_pred eEEEEEccCCCC-------CceEEECCCCceeEEeccceEEEeCCCHHHhccCccccCCceEEEEEEEecCCEEeeCCcc
Confidence 568899999985 4889999999999999999999999981 4568999999888887777888
Q ss_pred eeeccC
Q 004027 593 FEYRAS 598 (778)
Q Consensus 593 FEYr~~ 598 (778)
|+|...
T Consensus 416 fty~pe 421 (422)
T 3iag_C 416 FTYTPE 421 (422)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 999653
No 132
>2v2t_A RELB, transcription factor RELB; 4-diphosphocytidyl-2C-methyl-D-erythritol, aquifex aeolicus, nucleotide-binding, isoprene biosynthesis; 3.05A {Mus musculus} PDB: 3do7_A
Probab=90.29 E-value=0.36 Score=51.10 Aligned_cols=85 Identities=14% Similarity=0.125 Sum_probs=62.6
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCC-chhhhcccceEEEeCCe--eee-----eEEeeCCceeeecCC-C-----C
Q 004027 506 QLYSIIDFSPNWAYVSSEVKVLITGRFLM-SQQEAENCKWSCMFGEI--EVP-----AEIVAGGVLRCHTSS-Q-----K 571 (778)
Q Consensus 506 q~fsI~d~SP~wgy~~GGtKVlI~G~f~~-~~~~~~~~~~~cmFGd~--eVp-----aei~q~GVLrC~~Pp-H-----~ 571 (778)
+-..|.++|=.-|++.||.||.++|..+. .. .-|.|=+. |.- +.+.....|+|.+|| + .
T Consensus 189 ~eL~I~r~s~~sgsv~GG~Ev~LLc~kv~K~d-------ikV~F~e~~WE~~~~f~~~Dvh~Q~aIvf~tPpY~~~~I~~ 261 (288)
T 2v2t_A 189 SELRICRINKESGPCTGGEELYLLCDKVQKED-------ISVVFSTASWEGRADFSQADVHRQIAIVFKTPPYEDLEISE 261 (288)
T ss_dssp SCCCBCCCSCSCCCSSCCCEEEEEBSSCCTTS-------EEEEEECSSCEEECCCCGGGEETTTEEEEECCCCTTCCCSS
T ss_pred CCCeEEEeeCCccccCCCCEEEEEecccccCC-------CEEEEEecceEEeeEeChhhccceeEEEEECCCCCCCCcCC
Confidence 34589999999999999999999999765 22 33545432 333 334556789999999 2 5
Q ss_pred CCcccEEEEeCCCcccccceeeeecc
Q 004027 572 VGRVPFYVTCSNRLSCSEVREFEYRA 597 (778)
Q Consensus 572 pG~VpL~Vtcsnr~~cSEVr~FEYr~ 597 (778)
|=.|-|+|.......+|+...|+|..
T Consensus 262 pV~V~iqL~r~sd~~~Sep~~FtY~P 287 (288)
T 2v2t_A 262 PVTVNVFLQRLTDGVCSEPLPFTYLP 287 (288)
T ss_dssp CCBCCEEEEETTTCCBCCCBCCBCCC
T ss_pred CeEEEEEEEeCCCCCcCCCcCcEEcC
Confidence 55777788775555789999999964
No 133
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=89.12 E-value=0.59 Score=51.70 Aligned_cols=71 Identities=17% Similarity=0.110 Sum_probs=53.0
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCC-eeee-eEEe--eCCceeeecCCC-C--CCcccEE
Q 004027 506 QLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGE-IEVP-AEIV--AGGVLRCHTSSQ-K--VGRVPFY 578 (778)
Q Consensus 506 q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd-~eVp-aei~--q~GVLrC~~PpH-~--pG~VpL~ 578 (778)
...+|+.|+|+.+ ..|..|+|.|.+|... -.|.||. +++. ...+ ....|+-.+|.- . +|.|.|
T Consensus 112 PaPtITSISpe~~--~aGd~VTItGsNF~~i-------skV~FgG~veaT~~~svs~S~T~ItVtVPaGA~~~sG~ItV- 181 (439)
T 3orj_A 112 AAPSITKISNCMP--NVGEPIIVYGSGLTEI-------AKVVFPGNVVVTEGIISDLDGEYFMVDMPAGVSEEGGSIFV- 181 (439)
T ss_dssp SCCEEEEESCSSC--CTTCEEEEEEECCTTC-------CEEEETTTEEECSSCEECTTSSEEEEECCTTCCTTCBCCEE-
T ss_pred CCCEEEEeCCCCC--CCCCEEEEEccCCCce-------eEEEECCCeeEEEEEEecCCCCEEEEEecCCCcCCCceEEE-
Confidence 3579999999876 5789999999999876 4599985 5665 2334 678999999996 4 577664
Q ss_pred EEeCCCccc
Q 004027 579 VTCSNRLSC 587 (778)
Q Consensus 579 Vtcsnr~~c 587 (778)
...++.+.
T Consensus 182 -vT~~GtA~ 189 (439)
T 3orj_A 182 -EGSNGGAY 189 (439)
T ss_dssp -EETTEEEE
T ss_pred -EeCCCcEe
Confidence 45455443
No 134
>1p7h_L Nuclear factor of activated T-cells, cytoplasmic 2; DNA binding protein, transcription regulation, activator, transcription/DNA complex; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 2o93_L 1a02_N* 1pzu_B 1owr_M 2as5_N 1s9k_C 3qrf_N 1nfa_A 1a66_A*
Probab=88.62 E-value=0.49 Score=50.08 Aligned_cols=88 Identities=17% Similarity=0.271 Sum_probs=60.9
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCchhhh--------cccceEEEeCCeeeeeEEeeCCceeeecCC-C-----C
Q 004027 506 QLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEA--------ENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-Q-----K 571 (778)
Q Consensus 506 q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~--------~~~~~~cmFGd~eVpaei~q~GVLrC~~Pp-H-----~ 571 (778)
-...|.+.+-.-|++.||-||.++|..+...-.+ ...-| -+||++. .++.....|+|.+|| + .
T Consensus 184 ~~l~I~r~s~~sg~v~GG~Ei~Llc~kv~KDikVrF~E~~~dg~~~W-e~~g~f~--~dvh~Q~AIvfkTPpY~~~~I~~ 260 (286)
T 1p7h_L 184 ELPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIW-EMEATVD--KDKSQPNMLFVEIPEYRNKHIRT 260 (286)
T ss_dssp CCCEEEEESCSEEETTCCCEEEEEEESCCSSCEEEEEEECSSSCEEE-EEEECBC--TTTCBTTEEEEECCCCSCTTCSS
T ss_pred CCCeEEEeccccccccCCcEEEEEecccCCCcEEEEEEECCCCCcce-EEeEEeC--ccccccceEEEECCCCccCccCC
Confidence 4579999999999999999999999987422110 00112 2334332 245667789999999 2 4
Q ss_pred CCcccEEEEeCCCcccccceeeeecc
Q 004027 572 VGRVPFYVTCSNRLSCSEVREFEYRA 597 (778)
Q Consensus 572 pG~VpL~Vtcsnr~~cSEVr~FEYr~ 597 (778)
|=.|-|++... ...+|+...|+|..
T Consensus 261 pV~V~~~l~r~-d~~~Sep~~FtY~P 285 (286)
T 1p7h_L 261 PVKVNFYVING-KRKRSQPQHFTYHP 285 (286)
T ss_dssp CEEEEEEEEET-TTEECCCEEEEEEC
T ss_pred CeEEEEEEeCC-CCCcCCCcCceEec
Confidence 55666677665 44689999999964
No 135
>1nfk_A Protein (nuclear factor kappa-B (NF-KB)); NF-KB P50, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 2v2t_B 1ooa_A 1lei_B* 1le9_B 1le5_B* 2i9t_B 1vkx_B* 3gut_B 2o61_B
Probab=88.56 E-value=0.54 Score=50.57 Aligned_cols=86 Identities=16% Similarity=0.152 Sum_probs=61.1
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCC-------eee-----eeEEeeCCceeeecCC-C---
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGE-------IEV-----PAEIVAGGVLRCHTSS-Q--- 570 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd-------~eV-----paei~q~GVLrC~~Pp-H--- 570 (778)
-..|.+++-.-|++.||.||.++|..+.-. ..-|.|=+ -+. ++.+.....|+|.+|| +
T Consensus 209 eL~I~r~s~~sg~v~GG~Ev~LLc~kv~K~------Di~VrF~E~~~~g~~WE~~g~f~~~Dvh~Q~AIvfkTPpY~~~~ 282 (325)
T 1nfk_A 209 NLKIVRMDRTAGCVTGGEEIYLLCDKVQKD------DIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVN 282 (325)
T ss_dssp CCCEEEESCSCEESSCCCEEEEEESCCCTT------TEEEEEEECCCSSCCEEEECBCCGGGBCTTSEEEEECCCTTSSC
T ss_pred CCeEEEecCCccccCCCCEEEEEecccccC------CCEEEEEEeCCCCCeeEEeeeeCHHHccceeEEEEECCCCCCCC
Confidence 348999999999999999999999977521 12344422 122 2344456789999999 2
Q ss_pred --CCCcccEEEEeCCCcccccceeeeeccC
Q 004027 571 --KVGRVPFYVTCSNRLSCSEVREFEYRAS 598 (778)
Q Consensus 571 --~pG~VpL~Vtcsnr~~cSEVr~FEYr~~ 598 (778)
.|=.|-|+|.......+|+...|+|...
T Consensus 283 I~~pV~V~iqL~r~sd~~~Sep~~FtY~P~ 312 (325)
T 1nfk_A 283 ITKPASVFVQLRRKSDLETSEPKPFLYYPE 312 (325)
T ss_dssp CCSSEEEEEEEEETTTCCBCCCEEEEEECC
T ss_pred cCCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 4446666666555557899999999764
No 136
>1svc_P Protein (nuclear factor kappa-B (NF-KB)); DNA-binding, transcription regulation, activator, nuclear protein, phosphorylation, repeat, DNA; HET: DNA; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=88.38 E-value=0.61 Score=50.83 Aligned_cols=86 Identities=16% Similarity=0.136 Sum_probs=61.6
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe-------ee-----eeEEeeCCceeeecCCC----
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-------EV-----PAEIVAGGVLRCHTSSQ---- 570 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~-------eV-----paei~q~GVLrC~~PpH---- 570 (778)
-..|.+++-.-|++.||.||.++|..+.-. ..-|.|=+. +. ++.+.....|+|.+||=
T Consensus 249 eL~I~R~s~~sgsv~GG~Ev~LLc~Kv~K~------DikVrF~E~~~~g~~WE~~g~f~~~DVH~Q~AIvfkTPpY~~~~ 322 (365)
T 1svc_P 249 NLKIVRMDRTAGCVTGGEEIYLLCDKVQKD------DIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDIN 322 (365)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESSCCGG------GCEEEEEEEETTTEEEEEECBCCGGGEETTTEEEEECCCCSCSC
T ss_pred CCeEEEecCCccccCCCCEEEEEecccccC------CCEEEEEEeCCCCCeeEEeeeeChHHhcceeeEEEECCCCCCCC
Confidence 358999999999999999999999977521 123444332 22 34455567899999992
Q ss_pred --CCCcccEEEEeCCCcccccceeeeeccC
Q 004027 571 --KVGRVPFYVTCSNRLSCSEVREFEYRAS 598 (778)
Q Consensus 571 --~pG~VpL~Vtcsnr~~cSEVr~FEYr~~ 598 (778)
.|=.|-|+|.......+|+...|+|...
T Consensus 323 I~~pV~V~iqL~R~sd~~~Sep~~FtY~P~ 352 (365)
T 1svc_P 323 ITKPASVFVQLRRKSDLETSEPKPFLYYPE 352 (365)
T ss_dssp CSSCEEEEEEEECTTTCCBCCCEEEEEECC
T ss_pred cCCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 4446666666544457899999999764
No 137
>1a3q_A Protein (nuclear factor kappa-B P52); transcription factor, immune response, DNA-protein complex, transcription/DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 3do7_B 3jv6_B 3jv5_A
Probab=87.91 E-value=0.81 Score=48.40 Aligned_cols=83 Identities=12% Similarity=0.067 Sum_probs=60.2
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCC-----eeee-----eEEeeCCceeeecCCC------C
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGE-----IEVP-----AEIVAGGVLRCHTSSQ------K 571 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd-----~eVp-----aei~q~GVLrC~~PpH------~ 571 (778)
..|.+++=.-|++.||.||.++|..+.-. ..-|.|=+ -+.- +.+.....|+|.+||= .
T Consensus 186 L~I~r~s~~sg~v~GG~Ev~Llc~kv~K~------Di~V~F~E~~~~gWE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~~ 259 (285)
T 1a3q_A 186 LKISRMDKTAGSVRGGDEVYLLCDKVQKD------DIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIER 259 (285)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESSCCTT------TEEEEEEECSSSCEEEECBCCGGGEETTTEEEEECCCCSCTTCSS
T ss_pred CeEEEecCCccccCCCCEEEEEeccccCC------CCEEEEEecCCCCCEEeeEeCHHHccceeeEEEECCCCCCCCCCC
Confidence 47999999999999999999999977531 13344433 2333 3344467799999992 4
Q ss_pred CCcccEEEEeCCCcccccceeeeec
Q 004027 572 VGRVPFYVTCSNRLSCSEVREFEYR 596 (778)
Q Consensus 572 pG~VpL~Vtcsnr~~cSEVr~FEYr 596 (778)
|=.|-|+|.......+|+...|+|.
T Consensus 260 pV~V~iqL~r~sd~~~Sep~~FtY~ 284 (285)
T 1a3q_A 260 PVTVFLQLKRKRGGDVSDSKQFTYY 284 (285)
T ss_dssp CEEEEEEEEETTTCCBCCCEEEEEE
T ss_pred CeEEEEEEEeCCCCCccCCCCceeC
Confidence 4466666766555668999999995
No 138
>1ikn_A P65, protein (NF-kappa-B P65 subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 1nfi_A 2ram_A* 1ram_A* 2i9t_A 1lei_A* 1le9_A 1le5_A* 1vkx_A* 3gut_A
Probab=87.85 E-value=0.99 Score=47.76 Aligned_cols=85 Identities=14% Similarity=0.094 Sum_probs=59.4
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCC-chhhhcccceEEEeCC-e-eeee-----EEeeCCceeeecCC-C-----CC
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLM-SQQEAENCKWSCMFGE-I-EVPA-----EIVAGGVLRCHTSS-Q-----KV 572 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~-~~~~~~~~~~~cmFGd-~-eVpa-----ei~q~GVLrC~~Pp-H-----~p 572 (778)
-..|.+++=.-|++.||.||.++|..+. .. .-|.|=+ . +.-+ .+.....|+|.+|| | .|
T Consensus 175 eL~I~r~s~~sg~v~GG~Ev~Llc~kv~K~d-------i~V~F~e~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~~p 247 (286)
T 1ikn_A 175 ELKICRVNRNSGSCLGGDEIFLLCDKVQKED-------IEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAP 247 (286)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESCCCTTS-------CEEEEEETTEEEECBCCGGGBCTTSEEEEECCCCSCTTCSSC
T ss_pred CCeEEEecCCccccCCCCEEEEEecccccCC-------CEEEEeccceEEeeecCHHHhccceeEEEECCCCCCCCcCCC
Confidence 3489999999999999999999999775 22 1233322 1 3333 33446779999999 2 34
Q ss_pred CcccEEEEeCCCcccccceeeeeccC
Q 004027 573 GRVPFYVTCSNRLSCSEVREFEYRAS 598 (778)
Q Consensus 573 G~VpL~Vtcsnr~~cSEVr~FEYr~~ 598 (778)
=.|-|+|.......+|+...|+|...
T Consensus 248 V~V~i~L~r~sd~~~Sep~~FtY~P~ 273 (286)
T 1ikn_A 248 VRVSMQLRRPSDRELSEPMEFQYLPD 273 (286)
T ss_dssp EEEEEEEECTTTCCBCCCEEEEEECC
T ss_pred EEEEEEEEeCCCCCcCCCcCcEEecC
Confidence 45556665544566899999999764
No 139
>1imh_C NF-AT5, tonebp, nuclear factor of activated T cells 5; beta barrel, protein-DNA complex, double helix, DNA encirclement, transcription/DNA complex; 2.86A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=86.40 E-value=1.4 Score=46.61 Aligned_cols=88 Identities=19% Similarity=0.273 Sum_probs=59.6
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCchhh-------hcccceEEEeCCeeeeeEEeeCCceeeecCCC------CC
Q 004027 506 QLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQE-------AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ------KV 572 (778)
Q Consensus 506 q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~-------~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH------~p 572 (778)
-...|.++|-.-|++.||.||.++|..+...-. .....|- +||++. ++ .+....|+|.+||= .|
T Consensus 180 ~~l~I~r~s~~sg~v~GG~Ev~Llc~kv~KdikVrF~E~~~d~~~WE-~~~~f~-~~-dvhQ~aIvf~tPpY~~~~I~~p 256 (281)
T 1imh_C 180 GVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWK-SEAEID-ME-LFHQNHLIVKVPPYHDQHITLP 256 (281)
T ss_dssp CCCEEEEESCCEEETTCCCEEEEEEECCCTTCEEEEESSSCTTCSCE-EEECBC-GG-GCCSSEEEEECCCCSCTTCSSC
T ss_pred CCCeEEEEecCccccCCCcEEEEEeeccCCCcEEEEEEeCCCCCceE-EeEEeC-hh-hcccceEEEECCCCccCccCCC
Confidence 357999999999999999999999987653211 0001232 233332 12 23467899999992 44
Q ss_pred CcccEEEEeCCCcccccceeeeecc
Q 004027 573 GRVPFYVTCSNRLSCSEVREFEYRA 597 (778)
Q Consensus 573 G~VpL~Vtcsnr~~cSEVr~FEYr~ 597 (778)
=.|-|+|.. +...+|+...|+|..
T Consensus 257 V~V~iqL~r-sd~~~S~p~~FtY~P 280 (281)
T 1imh_C 257 VSVGIYVVT-NAGRSHDVQPFTYTP 280 (281)
T ss_dssp EEEEEEEEE-TTEECCSCEEEEEEC
T ss_pred eEEEEEEEe-CCCCccCCcCceecC
Confidence 466677665 445679999999964
No 140
>2o61_A Transcription factor P65/interferon regulatory FA 7/interferon regulatory factor...; protein-DNA complex, transcription-DNA complex; 2.80A {Homo sapiens}
Probab=85.42 E-value=1.2 Score=50.88 Aligned_cols=86 Identities=15% Similarity=0.115 Sum_probs=60.3
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe--ee-----eeEEeeCCceeeecCCC------CCCc
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI--EV-----PAEIVAGGVLRCHTSSQ------KVGR 574 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~--eV-----paei~q~GVLrC~~PpH------~pG~ 574 (778)
..|.++|-.-|++.||.||.|+|..+.-. ..-|.|=+. |. ++.+.....|+|.+||= .|=.
T Consensus 177 L~I~r~s~~sgsv~GG~Ev~LLc~kv~K~------DikVrF~e~~WE~~a~f~~~Dvh~Q~AIvfkTPpY~~~~I~~pV~ 250 (540)
T 2o61_A 177 LKICRVNRNSGSCLGGDEIFLLCDKVQKE------DIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVR 250 (540)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESSCBTT------BCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSSCCSSCEE
T ss_pred CeEEEecCCccccCCCCeEEEEecccccC------CcEEEEecccceeccccChhhhcceeeEEEeCCCCCCCCCCCCeE
Confidence 47999999999999999999999977531 122333221 22 24556678899999992 3345
Q ss_pred ccEEEEeCCCcccccceeeeeccCC
Q 004027 575 VPFYVTCSNRLSCSEVREFEYRASH 599 (778)
Q Consensus 575 VpL~Vtcsnr~~cSEVr~FEYr~~~ 599 (778)
|-|+|.......+|+...|+|....
T Consensus 251 V~iqL~r~sd~~~Sep~~FtY~P~~ 275 (540)
T 2o61_A 251 VSMQLRRPSDRELSEPMEFQYLPDG 275 (540)
T ss_dssp EEEEEECGGGCCBCCCEEEEEECC-
T ss_pred EEEEEEeCCCCCcCCCcCcEEecCC
Confidence 5566654345568999999998643
No 141
>1gji_A C-REL protein, C-REL proto-oncogene protein; NF-KB/DNA complex, transcription factor, C-REL homodimer, transcription/DNA complex; 2.85A {Gallus gallus} SCOP: b.1.18.1 b.2.5.3
Probab=83.82 E-value=1.9 Score=45.31 Aligned_cols=86 Identities=15% Similarity=0.095 Sum_probs=60.4
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCe--ee-----eeEEeeCCceeeecCCC-----CCC
Q 004027 506 QLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI--EV-----PAEIVAGGVLRCHTSSQ-----KVG 573 (778)
Q Consensus 506 q~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~--eV-----paei~q~GVLrC~~PpH-----~pG 573 (778)
+-..|.+++=.-|++.||.||.++|..+.-. + .-|.|=+. +. ++.+.....|+|.+||= .|=
T Consensus 177 ~eL~I~r~s~~sg~v~GG~Ev~LLc~kv~K~-d-----i~VrF~e~~We~~~~f~~~Dvh~Q~AIvf~TPpY~~~I~~pV 250 (275)
T 1gji_A 177 AELRICRVNKNCGSVKGGDEIFILCDKVQKD-D-----IEVRFVLDNWEAKGSFSQADVHRQVAIVFRTPPFLRDITEPI 250 (275)
T ss_dssp SCCCEEEESCSEEETTCCCEEEEEESCCCGG-G-----CEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSCCSSCE
T ss_pred CCCEEEEeeCCccccCCCCEEEEEecccccC-C-----CEEEEEccceeeccccChhhhcceeeEEEeCCCCCcCCCCCE
Confidence 3457999999999999999999999977531 1 22333321 22 34556677899999992 344
Q ss_pred cccEEEEeCCCcccccceeeeecc
Q 004027 574 RVPFYVTCSNRLSCSEVREFEYRA 597 (778)
Q Consensus 574 ~VpL~Vtcsnr~~cSEVr~FEYr~ 597 (778)
.|-|++.......+|+...|+|..
T Consensus 251 ~V~iqL~r~sd~~~Sep~~FtY~P 274 (275)
T 1gji_A 251 TVKMQLRRPSDQEVSEPMDFRYLP 274 (275)
T ss_dssp EEEEEEEEGGGTEECCCEEEEEEC
T ss_pred EEEEEEEcCCCCCccCCcCcEEcC
Confidence 555666654445589999999964
No 142
>3brd_A LIN-12 and GLP-1 phenotype protein 1, isoform A; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} SCOP: b.1.18.1 b.2.5.8 b.42.7.1 PDB: 2fo1_A 1ttu_A* 3brf_A*
Probab=75.94 E-value=5 Score=44.93 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=60.5
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCC----C------------
Q 004027 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ----K------------ 571 (778)
Q Consensus 508 fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH----~------------ 571 (778)
|-|.+..|--|- ++-.-+=|.|.+|... +.|.||++++-+.+-.+-.|.|.+|+- .
T Consensus 376 vP~V~~~~~~g~-g~~~mlel~G~nF~~~-------l~VWfG~~~aeT~~r~~e~l~c~vP~~s~~~~~~~~w~~~~~~~ 447 (477)
T 3brd_A 376 CPVVGSLEVDGH-GEASRVELHGRDFKPN-------LKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTT 447 (477)
T ss_dssp CCEEEEEEEECS-GGGCEEEEEEECCCTT-------EEEEETTEEECEEEEETTEEEEECCCHHHHSCTTTHHHHBCTTT
T ss_pred CCeeeEEeecCC-CceeEEEEEcccCCCC-------CeEEECCccceeeEEccceeeccCCCHHHhCccccccccccccC
Confidence 345555554321 1135677889999854 789999999988888888899999983 2
Q ss_pred -CCcccEEEEeCCCcccccceeeeecc
Q 004027 572 -VGRVPFYVTCSNRLSCSEVREFEYRA 597 (778)
Q Consensus 572 -pG~VpL~Vtcsnr~~cSEVr~FEYr~ 597 (778)
|-.|||-+...++..-.--..|+|..
T Consensus 448 ~~~~vPl~LVr~dGviy~t~~tf~y~p 474 (477)
T 3brd_A 448 GDVEVPISLVRDDGVVYSSGLTFSYKS 474 (477)
T ss_dssp CCBEEEEEEEETTSEEEEEEEEEETTC
T ss_pred CceEeeEEEEecCCEEEecCceEEecc
Confidence 33499988888888777777888864
No 143
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.20 E-value=6.2 Score=37.04 Aligned_cols=29 Identities=24% Similarity=0.653 Sum_probs=21.7
Q ss_pred EEeeccccccccceeeeecccccccceEEEe
Q 004027 101 CYYAHGEENENFQRRSYWMLEEELSHIVLVH 131 (778)
Q Consensus 101 ~~yah~~~~~~f~rr~y~~l~~~~~~ivlvh 131 (778)
.|-+|--..-+-+||-||.||.. .|.|.+
T Consensus 12 GWmVH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (129)
T 2d9z_A 12 GWMVHYTSRDNLRKRHYWRLDSK--CLTLFQ 40 (129)
T ss_dssp EEEEEEESSCCCCEEEEEEEESS--CEEEES
T ss_pred ceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 66777655555699999999987 577754
No 144
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=43.92 E-value=17 Score=40.31 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=51.1
Q ss_pred cCCCceEEEEEccCCCchhhhcccceEEEeCCeee--eeEEeeCCceeeecCCCC-CC------cccEEEEeCCCccccc
Q 004027 519 YVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEV--PAEIVAGGVLRCHTSSQK-VG------RVPFYVTCSNRLSCSE 589 (778)
Q Consensus 519 y~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eV--paei~q~GVLrC~~PpH~-pG------~VpL~Vtcsnr~~cSE 589 (778)
...-|..|+|.|.+|... -.|.||+++| ...++.+..|+-.+|... +| ...|+|.-+++..
T Consensus 34 ~a~pGd~ItItGsNL~~v-------tkV~FNdvea~fnstyiTdtsI~VtIPs~aP~G~vd~~VtnkI~VvTdgGt~--- 103 (439)
T 3orj_A 34 FARLGQLIRIEGEGFNGL-------KKVYINGYNCYFNPVFVSNKSFLVSVNSKVPTTEADENVRNTIRLVKDGGEY--- 103 (439)
T ss_dssp EEETTCEEEEEEECCTTC-------CEEEETTEECCBCGGGCCSSEEEEECCTTCCSTTSCTTTTTEEEEEETTEEE---
T ss_pred cccCCCEEEEEeeCCCCe-------eEEEECCEEeeeccccccCCEEEEEcCCCCCCccccccccceEEEEECCCEE---
Confidence 345799999999999876 3699999988 456789999999999874 45 3467777655532
Q ss_pred ceeeeecc
Q 004027 590 VREFEYRA 597 (778)
Q Consensus 590 Vr~FEYr~ 597 (778)
...|.+..
T Consensus 104 ty~FtVla 111 (439)
T 3orj_A 104 VYDFQIRA 111 (439)
T ss_dssp EEECEEEC
T ss_pred eeeeEEec
Confidence 23566554
No 145
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=30.52 E-value=14 Score=31.60 Aligned_cols=9 Identities=56% Similarity=1.121 Sum_probs=7.7
Q ss_pred cccCcccee
Q 004027 69 RKDGHNWRK 77 (778)
Q Consensus 69 r~dg~~w~k 77 (778)
-.|||.|||
T Consensus 14 ~~DGy~WRK 22 (76)
T 2ayd_A 14 VNDGYRWRK 22 (76)
T ss_dssp CCCSSCEEE
T ss_pred CCCCchhhh
Confidence 359999998
No 146
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=29.65 E-value=14 Score=31.83 Aligned_cols=10 Identities=50% Similarity=0.923 Sum_probs=8.1
Q ss_pred cccCccceec
Q 004027 69 RKDGHNWRKK 78 (778)
Q Consensus 69 r~dg~~w~kk 78 (778)
-.|||.|||=
T Consensus 17 ~dDGy~WRKY 26 (78)
T 1wj2_A 17 LDDGYRWRKY 26 (78)
T ss_dssp CCSSSCBCCC
T ss_pred CCCCchhhhC
Confidence 4699999874
No 147
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=25.08 E-value=53 Score=30.61 Aligned_cols=31 Identities=23% Similarity=0.542 Sum_probs=23.8
Q ss_pred EEEEeeccccccccceeeeecccccccceEEEe
Q 004027 99 LHCYYAHGEENENFQRRSYWMLEEELSHIVLVH 131 (778)
Q Consensus 99 ~~~~yah~~~~~~f~rr~y~~l~~~~~~ivlvh 131 (778)
--.|-+|--..-.-+||-||.||.. .|.|-+
T Consensus 10 keGW~VH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (125)
T 2coa_A 10 REGWVVHYSNKDTLRKRHYWRLDCK--CITLFQ 40 (125)
T ss_dssp EEEEEEECCSSSCCCEEEEEEECSS--EEEEES
T ss_pred ecceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 3478888777777789999999986 577643
No 148
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=22.97 E-value=1.7e+02 Score=34.37 Aligned_cols=87 Identities=17% Similarity=0.242 Sum_probs=54.1
Q ss_pred CCceEEEeecCCCccCC-CceEEEEEccCCCchhhhcccceEEEeCCe-eeeeEEeeCCceeeecCCC------CCC---
Q 004027 505 DQLYSIIDFSPNWAYVS-SEVKVLITGRFLMSQQEAENCKWSCMFGEI-EVPAEIVAGGVLRCHTSSQ------KVG--- 573 (778)
Q Consensus 505 ~q~fsI~d~SP~wgy~~-GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpaei~q~GVLrC~~PpH------~pG--- 573 (778)
.|=..|+ +.|.--... ..+.|++....+..- . ..|.|.||+. +.+|.+ ..+.+.|..|+- .+|
T Consensus 526 ~qC~~i~-~~P~~~s~~~~~~~v~l~v~~lP~l---~-~~~~C~fg~~~~~~a~~-~~~~v~C~sP~~~~~p~~p~g~d~ 599 (681)
T 3oky_A 526 SQCMSLE-VHPNSISVSDHSRLLSLVVNDAPNL---S-EGIACAFGNLTEVEGQV-SGSQVICISPGPKDVPVIPLDQDW 599 (681)
T ss_dssp GGCCEEE-EESSEEETTSCSCEEEEEEETCCCC---T-TCEEEEETTTEEEECEE-ETTEEEEECCCTTTSCCCC--CCE
T ss_pred Cccceee-ecCccccccccccEEEEeccCCCCC---C-CCCEEEcCCccccccee-cCCeeEeCCCCHHhCCCCCCCceE
Confidence 4556885 888866654 467888877776432 1 2499999996 777754 677888987763 334
Q ss_pred -cccEEEEeCC-CcccccceeeeeccC
Q 004027 574 -RVPFYVTCSN-RLSCSEVREFEYRAS 598 (778)
Q Consensus 574 -~VpL~Vtcsn-r~~cSEVr~FEYr~~ 598 (778)
.|+|.|.... +.. --..+|.|-+-
T Consensus 600 ~~v~l~l~~~~~~~~-~~s~~f~FYdC 625 (681)
T 3oky_A 600 FGLELQLRSKETGKI-FVSTEFKFYNC 625 (681)
T ss_dssp EEEEEEEEETTTCCE-EEEEEEEEECC
T ss_pred EEEEEEEEeccCCCc-eeEEeeEEEcC
Confidence 3566776642 221 11245666544
No 149
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=20.77 E-value=1.3e+02 Score=34.85 Aligned_cols=66 Identities=18% Similarity=0.167 Sum_probs=49.8
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCchhhhcccceEEEeCCeeeeeEEeeCCceeeecCCCCCCcccEEEE
Q 004027 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVT 580 (778)
Q Consensus 507 ~fsI~d~SP~wgy~~GGtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpaei~q~GVLrC~~PpH~pG~VpL~Vt 580 (778)
...|..+-|.=| .-|..|+|.|..|.... -.+.||..+....-|.+|.+.-.+|...+|.+.+.|+
T Consensus 498 ~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~v~ 563 (686)
T 1qho_A 498 APQIGSVAPNMG--IPGNVVTIDGKGFGTTQ------GTVTFGGVTATVKSWTSNRIEVYVPNMAAGLTDVKVT 563 (686)
T ss_dssp SCEEEEEESSEE--CTTCEEEEEEECCCSSC------CEEEETTEECCEEEECSSEEEEECCSCCCEEEEEEEE
T ss_pred CCcccccccccc--CCCCEEEEEeecCCCcc------eEEEEecceeeEEEcCCCcEEEecCCCCCCceEEEEe
Confidence 345666655332 23566899998776532 2499999887787899999999999889999999888
Done!